Query 025297
Match_columns 255
No_of_seqs 129 out of 1052
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 04:24:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025297.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025297hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14368 Maf-like protein; Pro 100.0 3.3E-65 7.2E-70 444.2 25.3 187 30-254 3-189 (193)
2 PRK00078 Maf-like protein; Rev 100.0 4.1E-65 9E-70 443.2 25.7 187 32-254 1-188 (192)
3 PRK02141 Maf-like protein; Rev 100.0 5.2E-65 1.1E-69 447.2 26.1 192 28-254 5-197 (207)
4 PRK00148 Maf-like protein; Rev 100.0 9.5E-65 2.1E-69 441.6 25.8 185 32-254 1-185 (194)
5 PRK00884 Maf-like protein; Rev 100.0 1.1E-64 2.4E-69 441.2 25.9 184 33-254 3-187 (194)
6 COG0424 Maf Nucleotide-binding 100.0 1.4E-64 3E-69 438.7 25.6 185 31-253 2-186 (193)
7 TIGR00172 maf MAF protein. Thi 100.0 1.3E-64 2.8E-69 437.3 25.1 182 31-252 2-183 (183)
8 PRK00032 Maf-like protein; Rev 100.0 3.3E-64 7.1E-69 437.0 25.2 183 33-254 3-185 (190)
9 PRK04056 Maf-like protein; Rev 100.0 2.6E-64 5.7E-69 434.3 24.2 179 34-251 2-180 (180)
10 PRK14366 Maf-like protein; Pro 100.0 5.3E-64 1.1E-68 437.2 25.4 184 32-254 5-189 (195)
11 PRK04694 Maf-like protein; Rev 100.0 5E-64 1.1E-68 435.8 24.8 186 34-254 2-187 (190)
12 PRK00234 Maf-like protein; Rev 100.0 1E-63 2.2E-68 434.5 26.1 184 33-254 3-187 (192)
13 PRK01526 Maf-like protein; Rev 100.0 1.3E-63 2.7E-68 437.9 25.8 189 29-254 5-196 (205)
14 PRK00648 Maf-like protein; Rev 100.0 1.7E-63 3.6E-68 432.9 25.2 185 31-254 2-187 (191)
15 PRK14362 Maf-like protein; Pro 100.0 2.1E-63 4.5E-68 437.0 25.7 185 31-254 11-196 (207)
16 PRK14361 Maf-like protein; Pro 100.0 1.7E-63 3.6E-68 431.6 24.7 180 34-254 1-180 (187)
17 PRK04425 Maf-like protein; Rev 100.0 2.9E-63 6.3E-68 432.9 26.2 186 31-254 4-191 (196)
18 PRK14367 Maf-like protein; Pro 100.0 1.9E-63 4.1E-68 435.9 25.0 189 33-254 3-191 (202)
19 PRK14365 Maf-like protein; Pro 100.0 2.8E-63 6E-68 433.4 25.8 184 33-254 3-187 (197)
20 PRK14364 Maf-like protein; Pro 100.0 2E-63 4.4E-68 429.1 24.4 180 36-255 1-180 (181)
21 PRK01441 Maf-like protein; Rev 100.0 4.2E-63 9.1E-68 435.2 25.7 191 31-254 4-195 (207)
22 PRK14363 Maf-like protein; Pro 100.0 5.8E-63 1.2E-67 433.3 24.9 182 32-253 1-182 (204)
23 cd00555 Maf Nucleotide binding 100.0 6.5E-63 1.4E-67 425.5 24.1 180 34-251 1-180 (180)
24 PRK02478 Maf-like protein; Rev 100.0 1.1E-62 2.4E-67 430.1 25.7 184 32-254 3-194 (199)
25 PRK01839 Maf-like protein; Rev 100.0 1.5E-62 3.2E-67 432.3 25.4 190 31-254 9-205 (209)
26 PF02545 Maf: Maf-like protein 100.0 4E-63 8.6E-68 431.7 16.9 186 32-254 1-188 (195)
27 KOG1509 Predicted nucleic acid 100.0 5.6E-53 1.2E-57 363.7 20.5 194 30-255 8-206 (209)
28 cd00985 Maf_Ham1 Maf_Ham1. Maf 100.0 6E-29 1.3E-33 202.1 18.2 122 34-194 1-123 (131)
29 cd00515 HAM1 NTPase/HAM1. Thi 92.6 3.9 8.4E-05 35.4 12.7 111 34-190 1-130 (183)
30 PRK00120 dITP/XTP pyrophosphat 92.0 7.9 0.00017 34.0 14.5 115 32-191 1-138 (196)
31 PRK14822 nucleoside-triphospha 91.6 7.4 0.00016 34.3 13.5 113 33-186 3-135 (200)
32 PRK14824 putative deoxyribonuc 91.4 9.6 0.00021 33.7 14.6 101 33-178 2-131 (201)
33 TIGR00042 non-canonical purine 91.0 9.9 0.00021 33.0 14.5 115 33-191 1-130 (184)
34 PRK14823 putative deoxyribonuc 90.9 10 0.00022 33.1 13.9 100 33-177 2-123 (191)
35 PF01725 Ham1p_like: Ham1 fami 89.4 4.6 0.0001 35.1 10.2 64 130-194 62-139 (189)
36 PRK02491 putative deoxyribonuc 87.6 27 0.00058 33.3 15.0 122 8-177 108-254 (328)
37 PRK14821 putative deoxyribonuc 86.5 21 0.00045 31.0 13.7 100 33-177 2-115 (184)
38 PRK14826 putative deoxyribonuc 74.2 66 0.0014 28.8 11.6 108 30-177 7-143 (222)
39 COG0127 Xanthosine triphosphat 67.6 88 0.0019 27.6 15.0 112 32-184 2-130 (194)
40 PRK14825 putative deoxyribonuc 66.2 93 0.002 27.3 14.3 115 33-191 3-140 (199)
41 PF07131 DUF1382: Protein of u 65.2 4.3 9.3E-05 29.3 1.6 34 13-65 4-37 (61)
42 TIGR00083 ribF riboflavin kina 44.7 38 0.00083 31.5 4.8 40 39-80 55-94 (288)
43 cd02064 FAD_synthetase_N FAD s 44.1 38 0.00081 28.8 4.3 38 39-78 57-94 (180)
44 cd01211 GAPCenA GAPCenA Phosph 41.8 1.1E+02 0.0024 25.3 6.4 55 141-195 9-75 (125)
45 PF00107 ADH_zinc_N: Zinc-bind 41.4 59 0.0013 25.0 4.8 30 33-62 16-45 (130)
46 COG0041 PurE Phosphoribosylcar 39.6 33 0.00071 29.5 3.2 28 32-59 5-37 (162)
47 PRK05627 bifunctional riboflav 38.9 53 0.0011 30.7 4.8 37 40-78 72-108 (305)
48 PRK06372 translation initiatio 38.2 2E+02 0.0043 26.4 8.3 40 129-171 153-192 (253)
49 PF01379 Porphobil_deam: Porph 35.0 32 0.0007 30.8 2.6 26 33-58 120-145 (215)
50 PF05125 Phage_cap_P2: Phage m 33.9 1.6E+02 0.0035 28.2 7.1 98 130-233 224-332 (333)
51 COG0181 HemC Porphobilinogen d 33.9 30 0.00065 32.7 2.3 48 34-82 121-173 (307)
52 PRK07143 hypothetical protein; 32.8 79 0.0017 29.3 4.9 38 39-78 66-103 (279)
53 cd00494 HMBS Hydroxymethylbila 32.4 42 0.00091 31.5 3.0 30 35-64 119-150 (292)
54 COG1492 CobQ Cobyric acid synt 32.0 22 0.00048 35.6 1.1 46 199-245 315-361 (486)
55 COG1926 Predicted phosphoribos 32.0 76 0.0016 28.6 4.4 57 144-209 155-211 (220)
56 cd06532 Glyco_transf_25 Glycos 31.5 2.6E+02 0.0057 22.1 7.7 49 34-82 5-73 (128)
57 PF06574 FAD_syn: FAD syntheta 31.1 47 0.001 27.9 2.8 40 38-79 62-101 (157)
58 cd04911 ACT_AKiii-YclM-BS_1 AC 31.0 47 0.001 25.0 2.5 22 45-66 23-44 (76)
59 PHA02538 N capsid protein; Pro 30.9 1.8E+02 0.0038 28.1 6.9 98 130-233 229-337 (348)
60 COG4090 Uncharacterized protei 30.4 97 0.0021 26.1 4.4 41 134-177 85-126 (154)
61 PRK00072 hemC porphobilinogen 29.7 50 0.0011 31.0 3.0 31 34-64 122-154 (295)
62 PF09419 PGP_phosphatase: Mito 28.4 1.2E+02 0.0027 26.0 5.0 54 5-58 51-113 (168)
63 TIGR01551 major_capsid_P2 phag 28.0 2.2E+02 0.0047 27.3 6.9 98 130-233 218-326 (327)
64 PF09897 DUF2124: Uncharacteri 27.8 53 0.0012 27.9 2.6 39 135-176 81-120 (147)
65 PRK05772 translation initiatio 27.3 3.7E+02 0.008 26.0 8.5 93 46-170 194-286 (363)
66 PRK13843 conjugal transfer pro 26.2 1.2E+02 0.0026 27.1 4.6 26 141-166 39-66 (207)
67 TIGR00212 hemC porphobilinogen 26.1 63 0.0014 30.3 3.0 31 34-64 118-150 (292)
68 PF10288 DUF2392: Protein of u 25.9 13 0.00027 29.3 -1.5 46 194-240 38-97 (107)
69 TIGR01664 DNA-3'-Pase DNA 3'-p 25.9 1.6E+02 0.0036 24.5 5.3 42 30-73 57-113 (166)
70 COG5552 Uncharacterized conser 25.3 52 0.0011 25.0 1.8 17 152-168 21-37 (88)
71 PRK01066 porphobilinogen deami 25.3 64 0.0014 29.3 2.8 31 34-64 133-165 (231)
72 TIGR00511 ribulose_e2b2 ribose 24.2 5E+02 0.011 24.1 8.6 101 37-172 122-225 (301)
73 PLN02691 porphobilinogen deami 23.5 75 0.0016 30.6 3.0 31 34-64 165-197 (351)
74 PF05729 NACHT: NACHT domain 23.0 71 0.0015 25.1 2.4 19 190-208 143-161 (166)
75 TIGR01548 HAD-SF-IA-hyp1 haloa 22.3 3E+02 0.0064 23.0 6.3 24 30-53 121-146 (197)
76 smart00417 H4 Histone H4. 22.3 62 0.0013 24.2 1.8 17 237-253 9-25 (74)
77 TIGR00524 eIF-2B_rel eIF-2B al 21.9 4.3E+02 0.0094 24.6 7.7 40 129-171 199-238 (303)
No 1
>PRK14368 Maf-like protein; Provisional
Probab=100.00 E-value=3.3e-65 Score=444.17 Aligned_cols=187 Identities=28% Similarity=0.400 Sum_probs=176.9
Q ss_pred CCCeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHH
Q 025297 30 TPVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVAD 109 (255)
Q Consensus 30 ~~~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~ 109 (255)
.+++|||||+||||++||+++|++|++++++|||+.+++.+|.+||.++|.+|
T Consensus 3 ~~~~lILAS~SprR~eLL~~~g~~f~v~~~~iDE~~~~~~~p~~~v~~lA~~K--------------------------- 55 (193)
T PRK14368 3 ANSPIVLASASPRRSELLASAGIEFDVVPADIPEEPLPGEEPVDHVLRLAREK--------------------------- 55 (193)
T ss_pred CCCcEEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHH---------------------------
Confidence 45789999999999999999999999999999999988899999999999999
Q ss_pred HHHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEE
Q 025297 110 TAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDR 189 (255)
Q Consensus 110 ~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~ 189 (255)
|.+|+++++ +.+||||||||++||+|||||.|++||++||++|||++|+|||||||++..++..++++++
T Consensus 56 -A~~v~~~~~---------~~~vI~aDTvV~~~g~ilgKP~~~~eA~~~L~~lsG~~h~v~Tgv~l~~~~~~~~~~~~~~ 125 (193)
T PRK14368 56 -ARAAAALAE---------GRFFIGADTIVVCDGEIMGKPKDEADAVRMLKKLSGVPHEVITGFAVYDRERDGCVTKAVR 125 (193)
T ss_pred -HHHHHHhCC---------CCEEEEeCcEEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEECCCCEEEEEEEE
Confidence 777766543 4799999999999999999999999999999999999999999999997777778899999
Q ss_pred EEEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 190 VEIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 190 T~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
|+|+|++|++++|++||++++|+||||||+||| .|..||++|+|||+||||||+..++++|+++
T Consensus 126 t~V~f~~l~~~~I~~Yl~~~ep~dkAGay~Iqg-~g~~li~~I~Gdy~nV~GLPl~~l~~~L~~~ 189 (193)
T PRK14368 126 TKVFFKPLRDEEIRDYIATGCPMDKAGAYAIQG-GAAHMVRKIDGSYTNVVGLPLCEVVEALRTI 189 (193)
T ss_pred EEEEECCCCHHHHHHHHhcCCcccEeeeehhcC-ChhhcEeeeECCCCcccCcCHHHHHHHHHHc
Confidence 999999999999999999999999999999999 8999999999999999999999999999874
No 2
>PRK00078 Maf-like protein; Reviewed
Probab=100.00 E-value=4.1e-65 Score=443.24 Aligned_cols=187 Identities=30% Similarity=0.454 Sum_probs=174.3
Q ss_pred CeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHH
Q 025297 32 VKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIR-KEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADT 110 (255)
Q Consensus 32 ~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~-~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~ 110 (255)
|+|||||+||||++||+++|++|++++++|||+.+. ..+|.+||.++|++|
T Consensus 1 ~~iILAS~SprR~elL~~~g~~f~v~~~~idE~~~~~~~~p~~~~~~lA~~K---------------------------- 52 (192)
T PRK00078 1 MKIILASASERRQELLKRILEDFQVIVSDFDESSVPFKGNIESYVMNLAEGK---------------------------- 52 (192)
T ss_pred CcEEEeCCCHHHHHHHHhCCCCeEEeCCCCCCCCCCCCCCHHHHHHHHHHHH----------------------------
Confidence 579999999999999999999999999999999876 468999999999999
Q ss_pred HHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEE
Q 025297 111 AEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRV 190 (255)
Q Consensus 111 a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T 190 (255)
|.+|++++.. ++.+||||||||++||+|||||.|++||++||++|||++|+|||||||++..+++.++++++|
T Consensus 53 A~~v~~~~~~-------~~~lvI~aDTvV~~~g~ilgKP~~~eeA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~~~t 125 (192)
T PRK00078 53 ARSVSKKLDQ-------ESSIVIGCDTIVAFNGKVLGKPKDEEDAFEMLKALSGNEHEVYSGIAILDTKSNKIIKDFVCT 125 (192)
T ss_pred HHHHHHhcCC-------CCCEEEEeCeEEEECCEEeCCCCCHHHHHHHHHHHCCCcEEEEEEEEEEECCCCEEEEEEEEE
Confidence 6666665421 247999999999999999999999999999999999999999999999976778888999999
Q ss_pred EEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 191 EIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 191 ~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
+|+|++|++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 126 ~V~f~~ls~~~I~~Yi~~~ep~dkAG~y~Iqg-~g~~li~~I~G~y~nV~GLPl~~l~~~L~~~ 188 (192)
T PRK00078 126 EVKFSKLTDRQIRKYINTGEPMDKAGAYGIQG-KGGVFVEEINGCYYNVVGLPLNKLYKMLEEM 188 (192)
T ss_pred EEEECCCCHHHHHHHHcCCCcccEeeEEEEcC-ChhhcEeecCCCCCcCCCcCHHHHHHHHHHc
Confidence 99999999999999999999999999999999 8999999999999999999999999999864
No 3
>PRK02141 Maf-like protein; Reviewed
Probab=100.00 E-value=5.2e-65 Score=447.15 Aligned_cols=192 Identities=24% Similarity=0.397 Sum_probs=177.3
Q ss_pred CCCCCeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhcc
Q 025297 28 SATPVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIV 107 (255)
Q Consensus 28 ~~~~~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~ 107 (255)
.+.+++|||||+||||++||+++|++|++++++|||+.+++.+|.+||.++|++|
T Consensus 5 ~~~~~~iILAS~SprR~elL~~~G~~f~v~~~~iDE~~~~~~~p~~~~~~lA~~K------------------------- 59 (207)
T PRK02141 5 VCRPPRLILASSSRYRRELLERLRLPFDVVSPDIDETPLAGETPAATALRLAAAK------------------------- 59 (207)
T ss_pred cCCCCCEEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHH-------------------------
Confidence 3567889999999999999999999999999999999888889999999999999
Q ss_pred HHHHHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEE
Q 025297 108 ADTAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEW 187 (255)
Q Consensus 108 ~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~ 187 (255)
|.+|++++.. .++.+||||||||++||+|||||.|.+||++||++|||++|+|||||||++..+++..+++
T Consensus 60 ---A~~v~~~l~~------~~~~iVI~aDTvV~~~g~ilgKP~~~~eA~~mL~~lsG~~H~V~Tgv~l~~~~~~~~~~~~ 130 (207)
T PRK02141 60 ---ARAVAATIDA------PPGALVIGSDQVATFDGLQIGKPGTHERALAQLQAMRGRTVEFHSALCLYDSRTGETQSED 130 (207)
T ss_pred ---HHHHHHhhcc------CCCCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCceEEEEEEEEEECCCCeEEEEE
Confidence 5555553311 1357999999999999999999999999999999999999999999999976677888999
Q ss_pred EEEEEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeec-ccCCcccCCHHHHHHHHHHh
Q 025297 188 DRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVG-AMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 188 ~~T~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG-~~~nV~GLPl~~l~~lL~~~ 254 (255)
++|+|+|++|++++|++||++|+|+||||||+||| .|+.||++|+| ||+||||||+..++++|+++
T Consensus 131 ~~t~V~F~~ls~~~I~~Yv~~~ep~dkAGaY~IQg-~g~~li~~I~Gd~y~nVvGLPl~~l~~~L~~~ 197 (207)
T PRK02141 131 VVTRVRFRTLTDAELDAYLRAETPYDVAGSAKSEG-LGIALLDAIDSDDPTALVGLPLIALTRMLRAA 197 (207)
T ss_pred EEEEEEECCCCHHHHHHHHccCCCCceeeeeeccC-ChhheEEEEEECCCCcCCCcCHHHHHHHHHHc
Confidence 99999999999999999999999999999999999 89999999999 89999999999999999864
No 4
>PRK00148 Maf-like protein; Reviewed
Probab=100.00 E-value=9.5e-65 Score=441.64 Aligned_cols=185 Identities=29% Similarity=0.441 Sum_probs=175.6
Q ss_pred CeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHH
Q 025297 32 VKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTA 111 (255)
Q Consensus 32 ~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a 111 (255)
++|||||+||||++||+++|++|++++++|||+.++..+|.+||.++|++| |
T Consensus 1 ~~iILAS~SprR~elL~~~g~~f~~~~~~idE~~~~~~~p~~~v~~lA~~K----------------------------A 52 (194)
T PRK00148 1 TRLVLASASPARLKLLRLAGIPPLVVVSHVDEDAIAASSPSELVQALARAK----------------------------A 52 (194)
T ss_pred CCEEEeCCCHHHHHHHHHCCCCeEEECCCCCCCCCCCCCHHHHHHHHHHHH----------------------------H
Confidence 469999999999999999999999999999999988889999999999999 7
Q ss_pred HHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEE
Q 025297 112 EAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVE 191 (255)
Q Consensus 112 ~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~ 191 (255)
.+++++++ +.+||||||||+|||+|||||.|.+||++||++|||++|.|||||||++..+|+.++++++|+
T Consensus 53 ~~v~~~~~---------~~~vI~aDTvV~~~g~Il~KP~~~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~T~ 123 (194)
T PRK00148 53 EAVAENAP---------DAVVLGCDSMLLIDGRLLGKPHTPEEAIERWQQMSGRTGELYTGHALIDLDQGKTVTFYERTE 123 (194)
T ss_pred HHHHHhCC---------CCEEEEeCcEEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEECCCCeEEEEEEEEE
Confidence 77766543 479999999999999999999999999999999999999999999999877778899999999
Q ss_pred EEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 192 IQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 192 V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
|+|++|++++|++||++++|+||||||+||| .|+.||++|+|||+||||||+..+.++|+++
T Consensus 124 V~F~~l~~~~I~~Yl~~~e~~dkAGay~Iqg-~g~~~i~~I~G~~~nV~GLPl~~l~~~L~~~ 185 (194)
T PRK00148 124 VHFAELSDEEIEAYVATGEPLDCAGAFTLQG-LGGWFVDKIEGDPSNVIGLSLPLLRRLLKRF 185 (194)
T ss_pred EEECCCCHHHHHHHHhhCCccceeeEEEecc-ChhhcEEeeECCcccccCCCHHHHHHHHHHc
Confidence 9999999999999999999999999999999 8999999999999999999999999999873
No 5
>PRK00884 Maf-like protein; Reviewed
Probab=100.00 E-value=1.1e-64 Score=441.19 Aligned_cols=184 Identities=27% Similarity=0.467 Sum_probs=174.6
Q ss_pred eEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHHH
Q 025297 33 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTAE 112 (255)
Q Consensus 33 ~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~ 112 (255)
+|||||+||||++||+++|++|++++++|||+.+++.+|.+||.++|.+| |.
T Consensus 3 ~iILAS~SprR~elL~~~g~~f~v~~~~idE~~~~~~~p~~~v~~lA~~K----------------------------A~ 54 (194)
T PRK00884 3 QLILASTSPYRRALLEKLQLPFECAAPEVDETPRPGESPRQLVLRLAQEK----------------------------AQ 54 (194)
T ss_pred CEEEeCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH----------------------------HH
Confidence 69999999999999999999999999999999888889999999999999 77
Q ss_pred HHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 025297 113 AILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEI 192 (255)
Q Consensus 113 ~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~V 192 (255)
+|+++++ +.+||||||||++||+|||||.|++||++||++|||++|+|||||||++..+++.++++++|+|
T Consensus 55 ~v~~~~~---------~~~VI~aDTvV~~~g~ilgKP~~~eeA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~~~t~V 125 (194)
T PRK00884 55 SLASRYP---------DHLIIGSDQVCVLDGEITGKPLTEENARAQLRKASGNIVTFYTGLALFNSATGHLQTEVEPFDV 125 (194)
T ss_pred HHHhhCC---------CCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHHCCCceEEEEEEEEEECCCCeEEEEEEEEEE
Confidence 7766543 4799999999999999999999999999999999999999999999997667778899999999
Q ss_pred EEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeec-ccCCcccCCHHHHHHHHHHh
Q 025297 193 QFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVG-AMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 193 ~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG-~~~nV~GLPl~~l~~lL~~~ 254 (255)
+|++|++++|++||++++|+||||||+||| .|+.||++|+| ||+||||||+..++++|+++
T Consensus 126 ~f~~ls~~~I~~Yv~~~ep~dkAGay~IQg-~g~~li~~I~G~dy~nVvGLPl~~l~~~L~~~ 187 (194)
T PRK00884 126 HFRHLSEAEIDRYVRKEHPLHCAGSFKSEG-LGITLFERLEGRDPNTLVGLPLIALCQMLRRE 187 (194)
T ss_pred EECCCCHHHHHHHHhhCCCcceeeeEeecC-ChhheEEEeEECCCCcCCCCCHHHHHHHHHHc
Confidence 999999999999999999999999999999 89999999999 99999999999999999863
No 6
>COG0424 Maf Nucleotide-binding protein implicated in inhibition of septum formation [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.4e-64 Score=438.70 Aligned_cols=185 Identities=33% Similarity=0.533 Sum_probs=175.6
Q ss_pred CCeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHH
Q 025297 31 PVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADT 110 (255)
Q Consensus 31 ~~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~ 110 (255)
.+++||||+||||++||+++||+|++++++|||...+...|.+||+++|++|
T Consensus 2 ~~~LiLAS~SPrR~elL~~~gi~f~~~~~~iDE~~~~~~~P~~~v~~LA~~K---------------------------- 53 (193)
T COG0424 2 MPRLILASSSPRRRELLEQLGIPFEVIPSDIDEPLLKAEEPREYVLRLAEEK---------------------------- 53 (193)
T ss_pred CccEEEecCCHHHHHHHHHCCCCeEEecCCCCCCcccCCCHHHHHHHHHHHH----------------------------
Confidence 4689999999999999999999999999999999988777999999999999
Q ss_pred HHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEE
Q 025297 111 AEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRV 190 (255)
Q Consensus 111 a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T 190 (255)
|.+++.+++ ++.+||||||||++||+|+|||.|.+||++||+.|||++|+|||||||++..+ +.++.+++|
T Consensus 54 A~~va~~~~--------~~~~VigaDtvv~ldgrilgKP~~~~eA~~~L~~lSG~~h~v~T~v~li~~~~-~~~~~~~~t 124 (193)
T COG0424 54 ARAVAARLP--------PDALVIGADTVVVLDGRILGKPKDEEEAREMLRKLSGRTHQVYTGVALIDPGK-RVQSEVEVT 124 (193)
T ss_pred HHHHHHhCC--------CCCEEEecCeEEEECCEEecCCCCHHHHHHHHHHhcCCeEEEEEEEEEEECCC-eEEEEEEEE
Confidence 888887765 25899999999999999999999999999999999999999999999997554 688899999
Q ss_pred EEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHH
Q 025297 191 EIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKE 253 (255)
Q Consensus 191 ~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~ 253 (255)
+|+|++||+++|++||++|||+||||||+||| .|+.||++|+|||+||||||+..+.++|.+
T Consensus 125 ~V~F~~ls~~~I~~Yv~sgepl~kAGay~iqG-~G~~fie~IeGdy~~vvGLPL~~l~~~L~~ 186 (193)
T COG0424 125 KVRFRTLSDEEIEAYVASGEPLDKAGAYGIQG-LGGLFIEKIEGDYSNVVGLPLPELVQLLRE 186 (193)
T ss_pred EEEEccCCHHHHHHHHHcCCcccccceEEeec-ccceEEEEeecCcccccCccHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999999999999999999999986
No 7
>TIGR00172 maf MAF protein. This nonessential gene causes inhibition of septation when overexpressed. A member of the family is found in the Archaeon Pyrococcus horikoshii and another in the round worm Caenorhabditis elegans.
Probab=100.00 E-value=1.3e-64 Score=437.27 Aligned_cols=182 Identities=31% Similarity=0.500 Sum_probs=171.7
Q ss_pred CCeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHH
Q 025297 31 PVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADT 110 (255)
Q Consensus 31 ~~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~ 110 (255)
+++|||||+||||++||+++|++|+++|++|||+.+++.+|.+||.++|.+|
T Consensus 2 ~~~lILAS~SprR~elL~~~g~~f~v~~~~idE~~~~~~~p~~~~~~lA~~K---------------------------- 53 (183)
T TIGR00172 2 TKELILASQSPRRKELLEELGISFEQIVSEFDEKSLKTTSPRELVYRLAKEK---------------------------- 53 (183)
T ss_pred CCCEEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHH----------------------------
Confidence 4579999999999999999999999999999999998899999999999999
Q ss_pred HHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEE
Q 025297 111 AEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRV 190 (255)
Q Consensus 111 a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T 190 (255)
|.+|+++++ ..+||||||||+++|+|||||.|++||++||+.|||++|+|||||||... +..++++++|
T Consensus 54 a~~v~~~~~---------~~~vI~aDTvV~~~g~ilgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~--~~~~~~~~~t 122 (183)
T TIGR00172 54 AQAVAELLA---------DALIIGADTVVILDGEIYGKPKDKEEAAEFLRKLSGQEHEVYTAVALIDS--VHLLTFLDVT 122 (183)
T ss_pred HHHHHHhCC---------CCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEEC--CEEEEEEEEE
Confidence 777776654 36999999999999999999999999999999999999999999999853 3678999999
Q ss_pred EEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHH
Q 025297 191 EIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIK 252 (255)
Q Consensus 191 ~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~ 252 (255)
+|+|++|++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|+
T Consensus 123 ~v~f~~l~~~~I~~Yl~~~e~~dkAGay~Iqg-~g~~li~~I~Gd~~nV~GLPl~~l~~~L~ 183 (183)
T TIGR00172 123 KVHFRALDPEEIEKYVESGEPLEKAGAFGIEG-FGAPLIKKIDGDYSNVVGLPLEKLLGALR 183 (183)
T ss_pred EEEECCCCHHHHHHHHhcCCCcceeeEEEecc-ChhheEeeeECCcccccCCCHHHHHHHhC
Confidence 99999999999999999999999999999999 89999999999999999999999999874
No 8
>PRK00032 Maf-like protein; Reviewed
Probab=100.00 E-value=3.3e-64 Score=436.99 Aligned_cols=183 Identities=26% Similarity=0.399 Sum_probs=171.9
Q ss_pred eEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHHH
Q 025297 33 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTAE 112 (255)
Q Consensus 33 ~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~ 112 (255)
+|||||+||||++||+++|++|+++|++|||+.+++.+|.+||.++|++| |.
T Consensus 3 ~iILAS~SprR~elL~~~g~~f~v~~~~idE~~~~~~~p~~~v~~lA~~K----------------------------A~ 54 (190)
T PRK00032 3 SLYLASGSPRRRELLTQLGVPFEVLVPGIEEQRQPGESAQQYVERLARDK----------------------------AQ 54 (190)
T ss_pred CEEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHH----------------------------HH
Confidence 69999999999999999999999999999999988899999999999999 66
Q ss_pred HHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 025297 113 AILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEI 192 (255)
Q Consensus 113 ~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~V 192 (255)
+|++++. ++.+||||||||++||+|||||.|++||++||++|||++|+|||||||.. .+..++++++|+|
T Consensus 55 ~v~~~~~--------~~~~vI~aDTvV~~~g~IlgKP~~~eeA~~~L~~lsG~~h~v~T~v~l~~--~~~~~~~~~~t~V 124 (190)
T PRK00032 55 AGVALAP--------QDLPVLGADTIVVLDGEVLEKPRDAADAAAMLRALSGRTHQVMTAVALAD--SQRILSCLVVTDV 124 (190)
T ss_pred HHHHhcC--------CCCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEE--CCeEEEEEEEEEE
Confidence 6665532 25799999999999999999999999999999999999999999999985 4567789999999
Q ss_pred EEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 193 QFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 193 ~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
+|++|++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 125 ~F~~l~~~~I~~Yv~~~ep~dkAG~y~Iqg-~g~~li~~I~G~~~nVvGLPl~~l~~~L~~~ 185 (190)
T PRK00032 125 TFRTLSDEEIARYWASGEPLDKAGAYGIQG-LGGCFVRKINGSYHAVVGLPLVETAELLSNF 185 (190)
T ss_pred EECcCCHHHHHHHHhcCCccceeeeEEecc-ChhhcEeeeECCCCcccCCCHHHHHHHHHHc
Confidence 999999999999999999999999999999 8999999999999999999999999999874
No 9
>PRK04056 Maf-like protein; Reviewed
Probab=100.00 E-value=2.6e-64 Score=434.31 Aligned_cols=179 Identities=28% Similarity=0.428 Sum_probs=168.9
Q ss_pred EEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHHHH
Q 025297 34 IILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTAEA 113 (255)
Q Consensus 34 iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~~ 113 (255)
|||||+||||++||+++|++|++++++|||+.+++.+|.+||.++|++| |.+
T Consensus 2 iILAS~SprR~elL~~~g~~f~v~~~~idE~~~~~~~p~~~v~~lA~~K----------------------------a~~ 53 (180)
T PRK04056 2 IILASSSSTRANLLKEAGIEFEQKSLDFDEESIKKTSPKEFVYLAVKGK----------------------------LEQ 53 (180)
T ss_pred EEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHH----------------------------HHH
Confidence 8999999999999999999999999999999888889999999999999 777
Q ss_pred HHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEEEE
Q 025297 114 ILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQ 193 (255)
Q Consensus 114 v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~V~ 193 (255)
|+++++. +.+||||||||++||+|||||.|++||++||+.|||++|+|||||||.. .++.++++++|+|+
T Consensus 54 v~~~~~~--------~~~vI~aDTvV~~~g~ilgKP~~~~eA~~~L~~lsg~~h~V~T~v~l~~--~~~~~~~~~~t~V~ 123 (180)
T PRK04056 54 FLKKYGN--------ECNLLVADSVVSCGNKILRKAKDKEEAREMLKLQSGNEISVLTCMILKS--PEKEWLDLSVTTYR 123 (180)
T ss_pred HHHhCCC--------CCEEEEeCEEEEECCEEecCCCCHHHHHHHHHHHCCCcEEEEEEEEEEE--CCeEEEEEEEEEEE
Confidence 7776532 3699999999999999999999999999999999999999999999985 46678899999999
Q ss_pred EcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHH
Q 025297 194 FHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLI 251 (255)
Q Consensus 194 F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL 251 (255)
|+++++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|
T Consensus 124 f~~ls~~~I~~Yv~~~e~~dkAG~y~Iqg-~g~~li~~I~G~y~nVvGLPl~~l~~~L 180 (180)
T PRK04056 124 FKKFDEDDLEKYLESGLWQGKAGACMVEG-FHKKYIKSVSGNESTAMGLNVEKLKGFL 180 (180)
T ss_pred ECCCCHHHHHHHHhcCCccceeeeehhcC-ChhhcEEeeECCCCcCCCCCHHHHHhhC
Confidence 99999999999999999999999999999 8999999999999999999999998875
No 10
>PRK14366 Maf-like protein; Provisional
Probab=100.00 E-value=5.3e-64 Score=437.19 Aligned_cols=184 Identities=27% Similarity=0.357 Sum_probs=172.0
Q ss_pred CeEEEccCCHHHHHHHHhcCC-ceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHH
Q 025297 32 VKIILGSSSMPRRKILAEMGY-EFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADT 110 (255)
Q Consensus 32 ~~iILASsSprR~~lL~~lgi-~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~ 110 (255)
.+|||||+||||++||+++|+ +|++++++|||+.+++.+|.+||.++|.+|
T Consensus 5 ~~iILAS~SprR~elL~~~G~~~~~v~~~~iDE~~~~~~~p~~~v~~lA~~K---------------------------- 56 (195)
T PRK14366 5 DNLILASSSKQRLALLEQIGVVPGEIVSPDIDESPLKKELPKDYSIRMAKEK---------------------------- 56 (195)
T ss_pred CeEEEeCCCHHHHHHHHhCCCCCCEEeCCCCCCCCCCCCCHHHHHHHHHHHH----------------------------
Confidence 369999999999999999999 569999999999988889999999999999
Q ss_pred HHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEE
Q 025297 111 AEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRV 190 (255)
Q Consensus 111 a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T 190 (255)
|.+|+.+++ +.+||||||||++||+|||||.|++||++||++|||++|+|||||||+. .++..++++++|
T Consensus 57 A~~v~~~~~---------~~~vI~ADTvV~~~g~ilgKP~~~eeA~~mL~~lsG~~h~V~Tgv~l~~-~~~~~~~~~~~T 126 (195)
T PRK14366 57 AEKVQSLRP---------DKFVLGADTVVCCGRRILLKAETEEQAEEYLELLSGRRHRVYTSVCLYT-PGGKLHIRSVVT 126 (195)
T ss_pred HHHHHHhCC---------CCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEE-CCCeEEEEEEEE
Confidence 776665533 4799999999999999999999999999999999999999999999985 456667899999
Q ss_pred EEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 191 EIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 191 ~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
+|+|++|++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 127 ~V~F~~ls~~~I~~Yv~~~ep~dkAGay~Iqg-~g~~li~~I~Gdy~nVvGLPl~~~~~~L~~~ 189 (195)
T PRK14366 127 VVKFKRLSKQEIKYYIASGEWKGKAGGCNIQG-LAGKFVLSINGSYSSIIGLPLHETYCLLSGY 189 (195)
T ss_pred EEEECCCCHHHHHHHHhcCCccceeeeEeecC-ChhhcEeeeECCCCcccCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999 8999999999999999999999999999875
No 11
>PRK04694 Maf-like protein; Reviewed
Probab=100.00 E-value=5e-64 Score=435.85 Aligned_cols=186 Identities=23% Similarity=0.331 Sum_probs=171.0
Q ss_pred EEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHHHH
Q 025297 34 IILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTAEA 113 (255)
Q Consensus 34 iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~~ 113 (255)
|||||+||||++||+++|++|++++++|||...++.+|.+||.++|.+| |.+
T Consensus 2 lILAS~SprR~elL~~~g~~f~~~~~~idE~~~~~~~p~~~v~~lA~~K----------------------------A~~ 53 (190)
T PRK04694 2 LYLASRSPRRRELLQRLDVPFQTLQLDVPEVRAADESPDHYVQRVALEK----------------------------AHA 53 (190)
T ss_pred EEEcCCCHHHHHHHHHCCCCcEEecCCCCCCCCCCCCHHHHHHHHHHHH----------------------------HHH
Confidence 8999999999999999999999999999999888889999999999999 555
Q ss_pred HHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEEEE
Q 025297 114 ILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQ 193 (255)
Q Consensus 114 v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~V~ 193 (255)
|++++... .++.+||||||||++||+|||||.|.+||++||++|||++|+|||||||+. .++..+.++++|+|+
T Consensus 54 v~~~~~~~-----~~~~lvI~aDTvv~~~g~ilgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~-~~~~~~~~~~~t~V~ 127 (190)
T PRK04694 54 GLALVQAA-----DADAIVLGSDTEVVLGERVFGKPVDVDDAIAMLRALSGRTHQVLTAVVLVC-AQRAPAQALVVSEVT 127 (190)
T ss_pred HHHHhhcc-----CCCCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCceEEEEEEEEEE-CCccEEEEEEEEEEE
Confidence 54443210 135799999999999999999999999999999999999999999999985 455577889999999
Q ss_pred EcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 194 FHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 194 F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
|++|++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 128 F~~ls~~~I~~Yv~~~ep~dkAG~y~Iqg-~g~~li~~I~Gdy~nV~GLPl~~l~~~L~~~ 187 (190)
T PRK04694 128 FDLLDDAQIAAYAASGEPMGKAGAYAIQG-RAERFIRHLSGSYSGVMGLPLYQTSQLLTAF 187 (190)
T ss_pred ECCCCHHHHHHHHcCCCccceeeeehhcC-ChhhcEeeeECCCCcccCcCHHHHHHHHHhc
Confidence 99999999999999999999999999999 8999999999999999999999999999863
No 12
>PRK00234 Maf-like protein; Reviewed
Probab=100.00 E-value=1e-63 Score=434.53 Aligned_cols=184 Identities=29% Similarity=0.402 Sum_probs=174.1
Q ss_pred eEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHHH
Q 025297 33 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTAE 112 (255)
Q Consensus 33 ~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~ 112 (255)
+|||||+||||++||+++|++|++++++|||+.+++.+|.+||.++|++| |.
T Consensus 3 ~iILAS~SprR~elL~~~gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~K----------------------------a~ 54 (192)
T PRK00234 3 PLLLASSSPYRRELLARLRLPFTWASPDIDESHRPDESAEELVRRLARQK----------------------------AE 54 (192)
T ss_pred CEEEecCCHHHHHHHHHCCCCcEEECCCCCCCCCCCCCHHHHHHHHHHHH----------------------------HH
Confidence 69999999999999999999999999999999999899999999999999 77
Q ss_pred HHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 025297 113 AILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEI 192 (255)
Q Consensus 113 ~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~V 192 (255)
+++++++ +.+||||||||++||+|||||.|++||++||++|||++|.|+|||||++..++..+.++++|+|
T Consensus 55 ~v~~~~~---------~~~vI~aDTvV~~~g~Il~KP~~~~eA~~mL~~lsG~~h~V~T~v~l~~~~~~~~~~~~~~t~v 125 (192)
T PRK00234 55 ALAGSHP---------QHLIIGSDQVAVLGGQILGKPHTFERAREQLLAASGQSVTFLTGLALLNSATGHCQVDCVPFTV 125 (192)
T ss_pred HHHhhCC---------CCEEEEeCeEEEeCCEECCCCCCHHHHHHHHHHHCCCcEEEEEEEEEEECCCCeEEEEEEEEEE
Confidence 7776543 4799999999999999999999999999999999999999999999997777777889999999
Q ss_pred EEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeec-ccCCcccCCHHHHHHHHHHh
Q 025297 193 QFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVG-AMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 193 ~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG-~~~nV~GLPl~~l~~lL~~~ 254 (255)
+|+++++++|++||++|+|+||||||+||| .|+.||++|+| ||+||||||+..++++|++.
T Consensus 126 ~f~~l~~~~I~~Yl~~ge~~dkAG~y~Iqg-~g~~li~~i~G~dy~nVvGLPl~~l~~~L~~~ 187 (192)
T PRK00234 126 HMRELDRARIERYLEAEQPLDCAGSFKAEG-LGVSLFRSTEGEDATSLIGLPLIRLVDMLLKE 187 (192)
T ss_pred EECCCCHHHHHHHHhcCCcccceeEEeecc-ChhhEEEEEEEcCCCcCCCCCHHHHHHHHHHc
Confidence 999999999999999999999999999999 89999999999 99999999999999999763
No 13
>PRK01526 Maf-like protein; Reviewed
Probab=100.00 E-value=1.3e-63 Score=437.86 Aligned_cols=189 Identities=25% Similarity=0.331 Sum_probs=173.8
Q ss_pred CCCCeEEEccCCHHHHHHHHhcCC-ceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhcc
Q 025297 29 ATPVKIILGSSSMPRRKILAEMGY-EFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIV 107 (255)
Q Consensus 29 ~~~~~iILASsSprR~~lL~~lgi-~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~ 107 (255)
+..++|||||+||||++||+++|+ .|++++++|||+.++..+|.+||.++|.+|
T Consensus 5 ~~~~~lILAS~SprR~elL~~~g~~~~~v~~~~iDE~~~~~~~p~~~v~~lA~~K------------------------- 59 (205)
T PRK01526 5 RKNLPIILASSSPARIELLNRIKIIPSQIIPADIDETPNLRELPAPLAIRLAYEK------------------------- 59 (205)
T ss_pred CCCCEEEEeCCCHHHHHHHHhcCCCCceEecCCCCCCCCCCCCHHHHHHHHHHHH-------------------------
Confidence 445789999999999999999999 567999999999988889999999999999
Q ss_pred HHHHHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCc--EEE
Q 025297 108 ADTAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGF--RKG 185 (255)
Q Consensus 108 ~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~--~~~ 185 (255)
|.+|+.+++ ++.+||||||||++||+|||||.|++||++||++|||++|+|||||||++...+. .++
T Consensus 60 ---A~~v~~~~~--------~~~~VI~aDTvV~~~g~IlgKP~~~~eA~~mL~~lsG~~h~V~Tgv~l~~~~~~~~~~~~ 128 (205)
T PRK01526 60 ---AIKIASQIE--------ESAIIIAADTVAAVGRRILPKATTYEEVKNCIKMLSGRRHRVYTGLCIIKKENDQLTVRQ 128 (205)
T ss_pred ---HHHHHhhcC--------CCCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCCeEEEEEEEEEECCCCceEEEE
Confidence 777766543 2479999999999999999999999999999999999999999999999744443 467
Q ss_pred EEEEEEEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 186 EWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 186 ~~~~T~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
++++|+|+|++|++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 129 ~~~~t~V~f~~ls~~~I~~Yv~~~e~~dkAGaY~Iqg-~g~~li~~I~Gd~~nV~GLPl~~l~~~L~~~ 196 (205)
T PRK01526 129 KIVQTIVKFKKLSDEEINFYCSLDEGIDKAGGCKISG-YAEAFISFISGSYSNVMGLPLFETVNALTSL 196 (205)
T ss_pred EEEEEEEEECCCCHHHHHHHHhcCCCcCEeeeehhcC-ChhhcEeeeECCCCcccCcCHHHHHHHHHHc
Confidence 8999999999999999999999999999999999999 8999999999999999999999999999863
No 14
>PRK00648 Maf-like protein; Reviewed
Probab=100.00 E-value=1.7e-63 Score=432.86 Aligned_cols=185 Identities=31% Similarity=0.415 Sum_probs=172.3
Q ss_pred CCeEEEccCCHHHHHHHHhcCCceEEE-cCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHH
Q 025297 31 PVKIILGSSSMPRRKILAEMGYEFSVM-AADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVAD 109 (255)
Q Consensus 31 ~~~iILASsSprR~~lL~~lgi~f~v~-~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~ 109 (255)
.++|||||+||||++||+++|++|+++ ++++||+..+..+|.+||.++|++|
T Consensus 2 ~~~lILAS~SprR~elL~~~g~~f~v~~~~~~dE~~~~~~~p~~~v~~lA~~K--------------------------- 54 (191)
T PRK00648 2 KYKIILASSSPRRKEILEGFRIPFEVVPSPFVEESYPYSLDPEEITLELARLK--------------------------- 54 (191)
T ss_pred CCcEEEeCCCHHHHHHHHHCCCCeEEEeCCCCCCCCCCCCCHHHHHHHHHHHH---------------------------
Confidence 468999999999999999999999999 7899998888889999999999999
Q ss_pred HHHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEE
Q 025297 110 TAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDR 189 (255)
Q Consensus 110 ~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~ 189 (255)
|.+|++++. ++.+||||||||++||+|||||.|++||++||++|||++|+|||||||+. .++.++++++
T Consensus 55 -a~~v~~~~~--------~~~~VI~aDTvV~~~g~ilgKP~~~~eA~~~L~~lsG~~h~v~T~v~l~~--~~~~~~~~~~ 123 (191)
T PRK00648 55 -AEAVRSDLF--------PDELIITADTIVWYDGKVLGKPKDEEEAVEMLRTLSGKTHEVITGVCLLH--NGKLLSGSET 123 (191)
T ss_pred -HHHHHHhhC--------CCCEEEEeCeEEEECCEEeCCCCCHHHHHHHHHHhCCCCeEEEEEEEEEE--CCEEEEEEEE
Confidence 666665431 35799999999999999999999999999999999999999999999984 4667889999
Q ss_pred EEEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 190 VEIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 190 T~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
|+|+|++|++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 124 t~V~f~~ls~~~I~~Yv~~~ep~dkAG~y~Iqg-~g~~~i~~I~Gd~~nV~GLPl~~l~~~L~~~ 187 (191)
T PRK00648 124 TQVTFRELSDEEIEYYIDTYKPLDKAGAYGIQE-WGGLIVKKIEGSYYNVMGLPIQTLYEELKEL 187 (191)
T ss_pred EEEEECCCCHHHHHHHHcCCCccceeeeehhcC-ChhheEEeeECCCCccCCCCHHHHHHHHHHc
Confidence 999999999999999999999999999999999 8999999999999999999999999999874
No 15
>PRK14362 Maf-like protein; Provisional
Probab=100.00 E-value=2.1e-63 Score=436.98 Aligned_cols=185 Identities=28% Similarity=0.394 Sum_probs=171.9
Q ss_pred CCeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHH
Q 025297 31 PVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKS-IRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVAD 109 (255)
Q Consensus 31 ~~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~-~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~ 109 (255)
..+|||||+||||++||+++|++|+++++++||+. .++.+|.+||.++|++|
T Consensus 11 ~~~iILAS~SprR~eLL~~~g~~f~v~~~~~dEe~~~~~~~p~~~v~~lA~~K--------------------------- 63 (207)
T PRK14362 11 ACPVVLASGSPRRREFLEQMGLPFEVILPGAAEPSPIEGEQPEAYARRAAEAK--------------------------- 63 (207)
T ss_pred CceEEEeCCCHHHHHHHHHCCCCcEEECCCCCCCCCCCCCCHHHHHHHHHHHH---------------------------
Confidence 34799999999999999999999999999999954 56788999999999999
Q ss_pred HHHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEE
Q 025297 110 TAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDR 189 (255)
Q Consensus 110 ~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~ 189 (255)
|.+|+++++ +.+||||||||++||+|||||.|++||++||++|||++|+|||||||.. .++..+.++++
T Consensus 64 -A~~v~~~~~---------~~~VI~ADTvV~~~g~ilgKP~~~eeA~~~L~~lsG~~H~V~Tgv~l~~-~~~~~~~~~~~ 132 (207)
T PRK14362 64 -ARAVAADHA---------GRLVIAADTVVALDGMILGKPADRADALSMLRRLAGRTHEVVSACCVVL-PDGGREVFHAI 132 (207)
T ss_pred -HHHHHHhCC---------CCEEEEeCeEEEeCCEEcCCCCCHHHHHHHHHHhCCCceEEEEEEEEEE-CCCcEEEEEEE
Confidence 777766543 4799999999999999999999999999999999999999999999985 34567889999
Q ss_pred EEEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 190 VEIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 190 T~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
|+|+|++|++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 133 T~V~F~~ls~~~I~~Yv~~~ep~dkAG~Y~IQg-~g~~li~~I~G~y~nVvGLPl~~l~~~L~~~ 196 (207)
T PRK14362 133 TRVTMWDWPEAALAAYVATGEPSDKAGAYGIQG-IGAFLVRSIEGSWSNVVGLPVAELTALLLRR 196 (207)
T ss_pred EEEEECCCCHHHHHHHHhcCCccceeeeEeecC-ChhhcEeeeECCCCcccCCCHHHHHHHHHHC
Confidence 999999999999999999999999999999999 8999999999999999999999999999864
No 16
>PRK14361 Maf-like protein; Provisional
Probab=100.00 E-value=1.7e-63 Score=431.61 Aligned_cols=180 Identities=28% Similarity=0.449 Sum_probs=169.3
Q ss_pred EEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHHHH
Q 025297 34 IILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTAEA 113 (255)
Q Consensus 34 iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~~ 113 (255)
|||||+||||++||+++|++|+++++++||+. .+.+|.+||.++|.+| |.+
T Consensus 1 lILAS~SprR~elL~~~g~~f~v~~~~~dE~~-~~~~p~~~v~~lA~~K----------------------------a~~ 51 (187)
T PRK14361 1 VILASGSPRRRELLENLGVPFQVVVSGEAEDS-TETDPARLAAELALLK----------------------------ARA 51 (187)
T ss_pred CEEccCCHHHHHHHHHCCCCcEEECCCCCCCC-CCCCHHHHHHHHHHHH----------------------------HHH
Confidence 69999999999999999999999999999987 5678999999999999 777
Q ss_pred HHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEEEE
Q 025297 114 ILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQ 193 (255)
Q Consensus 114 v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~V~ 193 (255)
++.+++ +.+||||||||++||+|||||.|.+||++||++|||++|+|||||||+. .++.++++++|+|+
T Consensus 52 v~~~~~---------~~~vI~aDTvV~~~g~ilgKP~~~eeA~~~L~~lsG~~h~V~T~v~l~~--~~~~~~~~~~t~V~ 120 (187)
T PRK14361 52 VARLHP---------DAVVIAADTVVALGGVLLAKPADEAENEAFLRVLSGRTHQVYTGVAVLS--RGTEQVGVERTDVT 120 (187)
T ss_pred HHHhCC---------CCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCceEEEEEEEEEE--CCEEEEEEEEEEEE
Confidence 766543 4799999999999999999999999999999999999999999999985 45678899999999
Q ss_pred EcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 194 FHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 194 F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
|++|++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 121 f~~ls~~~I~~Yv~~~e~~dkAG~y~Iqg-~g~~~i~~I~G~y~nV~GLPl~~l~~~L~~~ 180 (187)
T PRK14361 121 FRALTAAEISFYARSGEGLDKAGGYGIQG-VGMALVSRVEGDYSNVVGFPLSLVIRLLRGA 180 (187)
T ss_pred ECCCCHHHHHHHHhCCCCccceeEEEecc-CccceEEEeECCCCceeCCCHHHHHHHHHHc
Confidence 99999999999999999999999999999 8999999999999999999999999999863
No 17
>PRK04425 Maf-like protein; Reviewed
Probab=100.00 E-value=2.9e-63 Score=432.89 Aligned_cols=186 Identities=22% Similarity=0.354 Sum_probs=175.5
Q ss_pred CCeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHH
Q 025297 31 PVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADT 110 (255)
Q Consensus 31 ~~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~ 110 (255)
.++|||||+||||++||+++|++|++++++|||+.+++.+|.+||+++|.+|
T Consensus 4 ~~~iILAS~SprR~elL~~~g~~f~v~~~~iDE~~~~~~~p~~~~~~lA~~K---------------------------- 55 (196)
T PRK04425 4 ELPLVLGTSSVFRREQMERLGIAFQAASPDFDETPMLGESAPQTALRLAEGK---------------------------- 55 (196)
T ss_pred CCcEEEeCCCHHHHHHHHHCCCCeEEECCCCCCCCCCCCCHHHHHHHHHHHH----------------------------
Confidence 4689999999999999999999999999999999988899999999999999
Q ss_pred HHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEE
Q 025297 111 AEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRV 190 (255)
Q Consensus 111 a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T 190 (255)
|.+++++++ +.+||||||||++||+|||||.|.+||++||++|||++|+|||||||++..++..++++++|
T Consensus 56 A~~v~~~~~---------~~lvI~aDTvV~~~g~ilgKP~~~eeA~~~L~~lsg~~h~v~T~v~l~~~~~~~~~~~~~~t 126 (196)
T PRK04425 56 ARSLTGRFP---------EALIVGADQVAWCDGRQWGKPMNLANAQKMLMHLSGREIEFYSALVLLNTVTGRMQRHIDKT 126 (196)
T ss_pred HHHHHhhCC---------CCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCcEEEEEEEEEEECCCCeEEEEEEEE
Confidence 777766543 47999999999999999999999999999999999999999999999987778888899999
Q ss_pred EEEEcCCCHHHHHHHHHcC-CCcccceeeeeccCCcccceeeeec-ccCCcccCCHHHHHHHHHHh
Q 025297 191 EIQFHEIPDEVIEKLIEEG-IVLNVAGGLIIEHSLILPYVKQVVG-AMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 191 ~V~F~~l~d~~I~~Yi~tg-e~~dkAGgy~Iqg~~g~~~I~~IeG-~~~nV~GLPl~~l~~lL~~~ 254 (255)
+|+|++|++++|++||+++ +|+||||||+||| .|+.||++|+| ||+||||||+..++++|+++
T Consensus 127 ~V~f~~ls~~~I~~Yv~~~~~~~dkAGay~iqg-~g~~li~~I~G~~~~nVvGLPl~~l~~~L~~~ 191 (196)
T PRK04425 127 VVVMRQLDELHILRYLEREPDAVYCSCAAKSEG-LGALLIERIESTDPNALIGLPVFRLVDFLKNE 191 (196)
T ss_pred EEEECCCCHHHHHHHHhCCCCcccceeEEEecc-ChhhEEEEEEeCCCCcCCCCCHHHHHHHHHHc
Confidence 9999999999999999996 8999999999999 89999999999 89999999999999999874
No 18
>PRK14367 Maf-like protein; Provisional
Probab=100.00 E-value=1.9e-63 Score=435.88 Aligned_cols=189 Identities=26% Similarity=0.416 Sum_probs=171.3
Q ss_pred eEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHHH
Q 025297 33 KIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTAE 112 (255)
Q Consensus 33 ~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~ 112 (255)
+|||||+||||++||+++|++|++++++|||+..+..+|.+||.++|++||++|++.+..
T Consensus 3 ~iILAS~SprR~eLL~~~Gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA~~v~~~~~~-------------------- 62 (202)
T PRK14367 3 TLYLGSNSPRRMEILTQLGYRVVKLPAGIDETVKAGETPARYVQRMAEEKNRTALTLFCE-------------------- 62 (202)
T ss_pred CEEEeCCCHHHHHHHHHCCCCeEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcc--------------------
Confidence 699999999999999999999999999999998888899999999999995555333211
Q ss_pred HHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 025297 113 AILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEI 192 (255)
Q Consensus 113 ~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~V 192 (255)
.+ ...++.+||||||||++||+|||||.|++||++||++|||++|+|||||||+. .++.++++++|+|
T Consensus 63 --------~~--~~~~~~~vI~aDTvV~~dg~IlgKP~~~eeA~~~L~~lsG~~h~V~Tgv~l~~--~~~~~~~~~~T~V 130 (202)
T PRK14367 63 --------TN--GTMPDFPLITADTCVVSDGIILGKPRSQAEAIEFLNRLSGKQHTVLTAVCIHY--RGKTSSRVQTNRV 130 (202)
T ss_pred --------cc--ccCCCCEEEEeCcEEEECCEEecCCCCHHHHHHHHHHhCCCCeEEEEEEEEEE--CCEEEEEEEEEEE
Confidence 00 00135799999999999999999999999999999999999999999999984 4677889999999
Q ss_pred EEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 193 QFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 193 ~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
+|++|++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 131 ~f~~ls~~~I~~Yv~~~e~~dkAGay~Iqg-~g~~~v~~I~G~y~nVvGLPl~~l~~~L~~~ 191 (202)
T PRK14367 131 VFKPLSSEEISAYVQSGEPMDKAGAYAVQG-IGGIFIQSIEGSFSGIMGLPVYETVSMLQDL 191 (202)
T ss_pred EECCCCHHHHHHHHhcCCccceeeeEeecC-ChhhcEeeeECCCccccCCCHHHHHHHHHHc
Confidence 999999999999999999999999999999 8999999999999999999999999999864
No 19
>PRK14365 Maf-like protein; Provisional
Probab=100.00 E-value=2.8e-63 Score=433.36 Aligned_cols=184 Identities=26% Similarity=0.410 Sum_probs=174.7
Q ss_pred eEEEccCCHHHHHHHHhc-CCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHH
Q 025297 33 KIILGSSSMPRRKILAEM-GYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTA 111 (255)
Q Consensus 33 ~iILASsSprR~~lL~~l-gi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a 111 (255)
+|||||+||||++||+++ |++|++++++|||+..++.+|.+|+.++|.+| |
T Consensus 3 ~iILaSsSprR~elL~~~~g~~f~vi~~~idE~~~~~~~p~~~v~~lA~~K----------------------------A 54 (197)
T PRK14365 3 RIILASASPRRKELLKQLIGDNFLVYPSSYEEPPQPGLDPEELLLKHSLEK----------------------------A 54 (197)
T ss_pred CEEEeCCCHHHHHHHhcCcCcCeEEECCCCCCCCCCCCCHHHHHHHHHHHH----------------------------H
Confidence 699999999999999995 99999999999999998899999999999999 7
Q ss_pred HHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEE
Q 025297 112 EAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVE 191 (255)
Q Consensus 112 ~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~ 191 (255)
.+++++++ +.+||||||||+++|+|+|||.|.+||++||++|||++|.|||||||++..+++...++++|+
T Consensus 55 ~~v~~~~~---------~~~vI~aDTvV~~~g~Il~KP~~~~eA~~~L~~lsg~~h~v~T~v~l~~~~~~~~~~~~~~T~ 125 (197)
T PRK14365 55 RDVAKHFD---------SGIIISADTSVFCNGEVLGKPASPENAEEMLEKLSGRKFLVITGLTVLDLDSGKEISEIESTD 125 (197)
T ss_pred HHHHHhCC---------CCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHHCCCceEEEEEEEEEECCCCeEEEEEEEEE
Confidence 77766643 479999999999999999999999999999999999999999999999777788889999999
Q ss_pred EEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 192 IQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 192 V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
|+|+++|+++|++||++++|+||||||+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 126 V~f~~l~~~~I~~Yv~~~e~~dkAG~y~iq~-~g~~li~~I~G~~~nV~GLPl~~l~~~L~~~ 187 (197)
T PRK14365 126 VWMTELSREQILAYVRTGEPLDKAGAFAIQG-KGAVLVEKIEGDFFNVVGLPLFRLGKILEKL 187 (197)
T ss_pred EEECCCCHHHHHHHHhcCCccceeeeEEecc-CccceEEeeEcCCccccCCCHHHHHHHHHHc
Confidence 9999999999999999999999999999999 8999999999999999999999999999863
No 20
>PRK14364 Maf-like protein; Provisional
Probab=100.00 E-value=2e-63 Score=429.13 Aligned_cols=180 Identities=27% Similarity=0.412 Sum_probs=170.2
Q ss_pred EccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHHHHHH
Q 025297 36 LGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTAEAIL 115 (255)
Q Consensus 36 LASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~~v~ 115 (255)
|||+||||++||+++|++|++++++|||+.++..+|.+||.++|.+| |.+|+
T Consensus 1 LAS~SprR~elL~~~g~~f~v~~~~~dE~~~~~~~p~~~~~~lA~~K----------------------------A~~v~ 52 (181)
T PRK14364 1 LASSSPRRRELLQQLGLNFEIYSPDIDESVHEGELVHQYVERLAREK----------------------------AQAVL 52 (181)
T ss_pred CCCCCHHHHHHHHHCCCCeEEECCCCCCCCCCCCCHHHHHHHHHHHH----------------------------HHHHH
Confidence 89999999999999999999999999999998889999999999999 77776
Q ss_pred hhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEEc
Q 025297 116 NRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFH 195 (255)
Q Consensus 116 ~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~V~F~ 195 (255)
++++ +.+||||||||++||+|||||.|++||++||++|||++|+|||||||.. .++.+.++++|+|+|+
T Consensus 53 ~~~~---------~~~vI~aDTvV~~~g~ilgKP~~~eeA~~~L~~lsG~~h~V~Tgv~l~~--~~~~~~~~~~t~V~f~ 121 (181)
T PRK14364 53 NIFP---------DSVIIAADTSLGLDGQIIGKPDSKQHAFDIWKQLSGRWHDVFSGICIAT--QQQILSQVVQTQVEFA 121 (181)
T ss_pred HhCC---------CCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCCeEEEEEEEEEE--CCEEEEEEEEEEEEEC
Confidence 6543 4799999999999999999999999999999999999999999999984 3567888999999999
Q ss_pred CCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHhC
Q 025297 196 EIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEAL 255 (255)
Q Consensus 196 ~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~~ 255 (255)
+|++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|+++.
T Consensus 122 ~ls~~~I~~Yv~~~e~~dkAG~y~Iqg-~g~~li~~I~Gdy~nVvGLPl~~l~~~L~~~~ 180 (181)
T PRK14364 122 SLTTQDMEDYWATGEPVGKAGAYAIQG-IASQYIPKIQGSYSNVVGLPLYEFSQLFKRVK 180 (181)
T ss_pred CCCHHHHHHHHhcCCCcCcccCEEeec-CceeeEEEeEcCCcceeCCCHHHHHHHHHhhc
Confidence 999999999999999999999999999 89999999999999999999999999998763
No 21
>PRK01441 Maf-like protein; Reviewed
Probab=100.00 E-value=4.2e-63 Score=435.16 Aligned_cols=191 Identities=28% Similarity=0.382 Sum_probs=172.3
Q ss_pred CCeEEEccCCHHHHHHHHhcCCceE-EEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHH
Q 025297 31 PVKIILGSSSMPRRKILAEMGYEFS-VMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVAD 109 (255)
Q Consensus 31 ~~~iILASsSprR~~lL~~lgi~f~-v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~ 109 (255)
+++|||||+||||++||+++|++|. ++|++|||+.++..+|.+||.++|++||
T Consensus 4 ~~~iILAS~SprR~elL~~~Gi~f~~v~~~~iDE~~~~~~~p~~~v~~lA~~Ka-------------------------- 57 (207)
T PRK01441 4 RPKLVLASGSPRRVELLNQAGIEPDRLMPADIDETPKRAEHPRSLARRLSREKA-------------------------- 57 (207)
T ss_pred CCcEEEeCCCHHHHHHHHhcCCCCeEEeCCCCCCCCCCCCCHHHHHHHHHHHHH--------------------------
Confidence 4679999999999999999999875 7899999999988999999999999994
Q ss_pred HHHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEE
Q 025297 110 TAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDR 189 (255)
Q Consensus 110 ~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~ 189 (255)
.+|++++.... ..++.+||||||||++||+|||||.|++||++||++|||++|.|||||||+. .+++.++++++
T Consensus 58 --~~v~~~~~~~~---~~~~~~vI~aDTvV~~~g~il~KP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~-~~~~~~~~~~~ 131 (207)
T PRK01441 58 --EAALEALQGDD---DWRGAYILAADTVVAVGRRILPKAELVDEASQCLRLLSGRNHRVYTGVCLVT-PDGKLRQKLVE 131 (207)
T ss_pred --HHHHHhccccc---cCCCcEEEecCEEEEECCEEcCCCCCHHHHHHHHHHHCCCceEEEEEEEEEE-CCceEEEEEEE
Confidence 44444432100 1245899999999999999999999999999999999999999999999985 55667789999
Q ss_pred EEEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 190 VEIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 190 T~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
|+|+|++||+++|++||++++|+||||||+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 132 T~V~F~~ls~~~I~~Yv~~~e~~dkAGgy~Iqg-~g~~~i~~I~G~y~nVvGLPl~~l~~~L~~~ 195 (207)
T PRK01441 132 TRVRFKRLSREDIEAYLASGEWRGKAGGYAIQG-IAGSFVVKLVGSYTNVVGLPLYETVSLLAGE 195 (207)
T ss_pred EEEEECCCCHHHHHHHHhcCCCccccccEEecc-ChhheEEEEECCccceeCCCHHHHHHHHHHc
Confidence 999999999999999999999999999999999 8999999999999999999999999999863
No 22
>PRK14363 Maf-like protein; Provisional
Probab=100.00 E-value=5.8e-63 Score=433.27 Aligned_cols=182 Identities=30% Similarity=0.466 Sum_probs=169.4
Q ss_pred CeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHH
Q 025297 32 VKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTA 111 (255)
Q Consensus 32 ~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a 111 (255)
++|||||+||||++||+++|++|+++|++|||+.. .+|.+||.++|.+| |
T Consensus 1 ~~iILAS~SprR~elL~~~G~~f~v~~~~iDE~~~--~~P~~~v~~lA~~K----------------------------A 50 (204)
T PRK14363 1 MRIILASSSPRRRQLMELLGIEFEVEKPDVEEEFL--ESPEETVRELSLRK----------------------------A 50 (204)
T ss_pred CcEEEeCCCHHHHHHHHhCCCCeEEEcCCCCCCCC--CCHHHHHHHHHHHH----------------------------H
Confidence 57999999999999999999999999999999874 68999999999999 6
Q ss_pred HHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEE
Q 025297 112 EAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVE 191 (255)
Q Consensus 112 ~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~ 191 (255)
.+|++++.. ++.+||||||||+|||+|||||.|++||++||++|||++|+|||||||+. .+..++++++|+
T Consensus 51 ~~v~~~~~~-------~~~lvI~aDTVV~~~g~IlgKP~~~eeA~~~L~~lsG~~H~V~T~v~l~~--~~~~~~~~~~T~ 121 (204)
T PRK14363 51 EWVFKKRKE-------EEILVIGSDTVVVLDGNILGKPESLEEAKGMLKKLSGRWHVVYTGVAFVS--SETKDVIVSSTK 121 (204)
T ss_pred HHHHHhccC-------CCCEEEEeCeEEEECCEEcCCCCCHHHHHHHHHHHCCCCcEEEEEEEEEE--CCeEEEEEEEEE
Confidence 666655321 35799999999999999999999999999999999999999999999985 455688999999
Q ss_pred EEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHH
Q 025297 192 IQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKE 253 (255)
Q Consensus 192 V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~ 253 (255)
|+|++|++++|++||++++|+||||||+||| .|..||++|+|||+||||||+..++++|++
T Consensus 122 V~F~~ls~~~I~~Yv~~~ep~dkAG~y~Iqg-~g~~~i~~I~G~~~nV~GLPl~~l~~~L~~ 182 (204)
T PRK14363 122 VRFRELPESVIDYYVEKYRPLDKAGAYGIQD-FAAVFVEKIEGDFFTVVGFPLGMVWQYLYE 182 (204)
T ss_pred EEECCCCHHHHHHHHhcCCChhhcceEEEcc-CccceEEeeECCCCceeCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999999999999999999987
No 23
>cd00555 Maf Nucleotide binding protein Maf. Maf has been implicated in inhibition of septum formation in eukaryotes, bacteria and archaea, but homologs in B.subtilis and S.cerevisiae are nonessential for cell division. Maf has been predicted to be a nucleotide- or nucleic acid-binding protein with structural similarity to the hypoxanthine/xanthine NTP pyrophosphatase Ham1 from Methanococcus jannaschii, RNase H from Escherichia coli, and some other nucleotide or RNA-binding proteins.
Probab=100.00 E-value=6.5e-63 Score=425.51 Aligned_cols=180 Identities=38% Similarity=0.576 Sum_probs=169.9
Q ss_pred EEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHHHH
Q 025297 34 IILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTAEA 113 (255)
Q Consensus 34 iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~~ 113 (255)
|||||+||||++||+++|++|++++++|||+.++..+|.+||.++|.+| |.+
T Consensus 1 iILaS~SprR~elL~~~g~~f~~~~~~iDE~~~~~~~p~~~v~~lA~~K----------------------------a~~ 52 (180)
T cd00555 1 LILASASPRRRELLEQLGIPFEVVPSDIDETPIKGESPEDYVLRLAEAK----------------------------AEA 52 (180)
T ss_pred CEECCCCHHHHHHHHhCCCCeEEEcCCCCCCCCCCCCHHHHHHHHHHHH----------------------------HHH
Confidence 6999999999999999999999999999999999899999999999999 777
Q ss_pred HHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEEEE
Q 025297 114 ILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQ 193 (255)
Q Consensus 114 v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~V~ 193 (255)
|.++++ ++.+||||||||++||+|+|||.|++||++||++|||++|.|||||||+... +..++++++|+|+
T Consensus 53 v~~~~~--------~~~liI~aDtvv~~~g~il~KP~~~~eA~~~L~~lsg~~h~v~T~v~l~~~~-~~~~~~~~~t~v~ 123 (180)
T cd00555 53 VAARLP--------PDALVIGADTVVVLDGRILGKPKDREEAREMLKRLSGRTHEVYTGVALIDPG-GKLVTDVESTKVR 123 (180)
T ss_pred HHHhCC--------CCCEEEEecEEEEECCEEEcCCCCHHHHHHHHHHHcCCCcEEEEEEEEEECC-cEEEEEEEEEEEE
Confidence 776654 1479999999999999999999999999999999999999999999999754 6678999999999
Q ss_pred EcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHH
Q 025297 194 FHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLI 251 (255)
Q Consensus 194 F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL 251 (255)
|++|++++|++||++|+|+||||||+||| .|..||++|+|||+||||||+..++++|
T Consensus 124 f~~l~~~~I~~Yi~~~~~~~kAGgy~iqg-~g~~~i~~I~G~~~nV~GLPl~~l~~~L 180 (180)
T cd00555 124 FRELSDEEIEAYVASGEPLDKAGAYGIQG-LGGALIERIEGDYSNVVGLPLPELLKLL 180 (180)
T ss_pred ECCCCHHHHHHHHhcCCccceeeEEEecc-ChhhcEEeeECCcccccCCCHHHHHhhC
Confidence 99999999999999999999999999999 7999999999999999999999998875
No 24
>PRK02478 Maf-like protein; Reviewed
Probab=100.00 E-value=1.1e-62 Score=430.12 Aligned_cols=184 Identities=28% Similarity=0.408 Sum_probs=169.9
Q ss_pred CeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCC------CCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhh
Q 025297 32 VKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIR------KEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTIL 105 (255)
Q Consensus 32 ~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~------~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~ 105 (255)
++|||||+||||++||+++|++|++++++|||+.++ +.+|.+||.++|++|
T Consensus 3 ~~iILAS~SprR~elL~~~g~~f~v~~~~idE~~~~~~~~~~~~~p~~~v~~lA~~K----------------------- 59 (199)
T PRK02478 3 VKLILASKSPFRRALLENAGLEFSAAAADIDERAVEAPLEESGATPEDVALVLAEAK----------------------- 59 (199)
T ss_pred CcEEEeCCCHHHHHHHHHCCCCeEEecCCCCCCccccccccCCCCHHHHHHHHHHHH-----------------------
Confidence 479999999999999999999999999999998765 367999999999999
Q ss_pred ccHHHHHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEE
Q 025297 106 IVADTAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKG 185 (255)
Q Consensus 106 ~~~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~ 185 (255)
|.+|+.+++ +.+||||||||++||+|||||.|++||++||++|||++|+|||||||+. .++..++
T Consensus 60 -----a~~v~~~~~---------~~ivI~aDTvV~~~g~ilgKP~~~~eA~~~L~~lsG~~h~V~T~v~l~~-~~~~~~~ 124 (199)
T PRK02478 60 -----AIDVSERFP---------GALVIGCDQTMSLGDEVFHKPKDMEEARRHLQKLSGKTHQLNSAVVLVR-DGKVLWR 124 (199)
T ss_pred -----HHHHHHHCC---------CCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHhcCCCcEEEEEEEEEE-CCcEEEE
Confidence 777776643 4799999999999999999999999999999999999999999999985 3344578
Q ss_pred EEEEEEEEEcCCCHHHHHHHHHc--CCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 186 EWDRVEIQFHEIPDEVIEKLIEE--GIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 186 ~~~~T~V~F~~l~d~~I~~Yi~t--ge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
++++|+|+|++|++++|++||++ ++|+||||||+||| .|..||++|+|||+||||||+..++++|+++
T Consensus 125 ~~~~t~V~f~~ls~~~I~~Yv~~~g~e~~dkAG~y~Iqg-~g~~li~~I~Gdy~nVvGLPl~~l~~~L~~~ 194 (199)
T PRK02478 125 HVSIAHMTMRDLDAGFIGRHLARVGEKALSSVGAYQLEG-EGIQLFEKIEGDYFTILGLPLLPLLAKLREL 194 (199)
T ss_pred EEEeEEEEECCCCHHHHHHHHhcCCCCccccceeEEecC-CceeeEEEeECCccceeCCCHHHHHHHHHHc
Confidence 89999999999999999999998 59999999999999 8999999999999999999999999999864
No 25
>PRK01839 Maf-like protein; Reviewed
Probab=100.00 E-value=1.5e-62 Score=432.28 Aligned_cols=190 Identities=24% Similarity=0.383 Sum_probs=169.6
Q ss_pred CCeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCC------CCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhh
Q 025297 31 PVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKS------IRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTI 104 (255)
Q Consensus 31 ~~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~------~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~ 104 (255)
.++|||||+||||++||+++|++|++++++|||+. ..+.+|.+||.++|++||++
T Consensus 9 ~~~lILAS~SprR~elL~~~gi~f~v~~~~idE~~~~~~~~~~~~~p~~~v~~lA~~Ka~~------------------- 69 (209)
T PRK01839 9 FPFLYLASQSPRRQELLQQLGVRFELLLPRPDEDAEALEAELPGEAPDDYVQRVCVAKAEA------------------- 69 (209)
T ss_pred CCCEEEeCCCHHHHHHHHHCCCCeEEeCCCCCcCccccccCCCCCCHHHHHHHHHHHHHHH-------------------
Confidence 35799999999999999999999999999999974 34578999999999999444
Q ss_pred hccHHHHHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcE-
Q 025297 105 LIVADTAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFR- 183 (255)
Q Consensus 105 ~~~~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~- 183 (255)
|++++.... .++.+||||||||++||+|+|||.|.+||++||++|||++|+|||||||++. +++.
T Consensus 70 ---------v~~~l~~~~----~~~~lvI~aDTvV~~~g~IlgKP~~~eeA~~~L~~lsg~~h~V~T~v~l~~~-~~~~~ 135 (209)
T PRK01839 70 ---------ARARLVARG----LPAAPVLVADTTVTIDGAILGKPADAADALAMLTRLAGRTHRVLTAVAVIDA-DGELM 135 (209)
T ss_pred ---------HHHhhcccc----CCCCEEEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEEC-CCeEE
Confidence 444332100 1357999999999999999999999999999999999999999999999964 3444
Q ss_pred EEEEEEEEEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 184 KGEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 184 ~~~~~~T~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
++++++|+|+|++|++++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|+++
T Consensus 136 ~~~~~~T~V~F~~l~~~~I~~Yi~~~e~~dkAGgy~Iqg-~g~~~i~~I~G~y~nV~GLPl~~l~~~L~~~ 205 (209)
T PRK01839 136 PPALSRSRVRFAPATRDAIARYVASGEPFGKAGAYAIQG-RAAEFVERIDGSYSGIMGLPLFETAALLRAA 205 (209)
T ss_pred EEEEEEEEEEECCCCHHHHHHHHhcCCChhhccEEEEcc-ChhheEEeeECCccceeCCCHHHHHHHHHHc
Confidence 589999999999999999999999999999999999999 8999999999999999999999999999864
No 26
>PF02545 Maf: Maf-like protein; InterPro: IPR003697 Maf is a putative inhibitor of septum formation in eukaryotes, bacteria, and archaea. The Maf protein shares substantial amino acid sequence identity with the Escherichia coli OrfE protein [].; GO: 0005737 cytoplasm; PDB: 2P5X_A 1EXC_B 1EX2_A.
Probab=100.00 E-value=4e-63 Score=431.71 Aligned_cols=186 Identities=39% Similarity=0.556 Sum_probs=145.3
Q ss_pred CeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHH
Q 025297 32 VKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRKE-KPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADT 110 (255)
Q Consensus 32 ~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~-~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~ 110 (255)
|+|||||+||||++||+++|++|++++++|||+..++. +|.+||.++|.+|
T Consensus 1 M~iILaS~SprR~elL~~~g~~f~v~~~~~dE~~~~~~~~p~~~v~~lA~~K---------------------------- 52 (195)
T PF02545_consen 1 MRIILASSSPRRRELLKQLGINFEVIPSDIDEDAIRKESDPEEYVQRLAEAK---------------------------- 52 (195)
T ss_dssp --EEE----HHHHHHHHCTT--EEE---------GCCSSSHHHHHHHHHHHH----------------------------
T ss_pred CCEEEeCCCHHHHHHHHHCCCCeEEEcCCCCCCCCccccCHHHHHHHHHHHH----------------------------
Confidence 57999999999999999999999999999999997655 6999999999999
Q ss_pred HHHHHhhCCCCCCccCCCC-ceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEE
Q 025297 111 AEAILNRLPIGDYIKEAEP-TILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDR 189 (255)
Q Consensus 111 a~~v~~~~~~~~~~~~~~~-~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~ 189 (255)
|.++..+.. ++ .+||||||||+++|+|||||.|++||++||++|||++|+|||||||+....+....++++
T Consensus 53 a~~~~~~~~--------~~~~~vi~aDTvv~~~g~Il~KP~~~eeA~~~L~~lsg~~h~V~T~v~l~~~~~~~~~~~~~~ 124 (195)
T PF02545_consen 53 AEAVVSKLY--------PDSAIVIGADTVVVCDGEILGKPKDEEEAREMLKSLSGKTHQVYTGVCLINPDKGQIFYFVEV 124 (195)
T ss_dssp HHHHHHCCH--------CCHSEEEEEEEEEECTTEEE-S-SSHHHHHHHHHHHTTSEEEEEEEEEEEECCECCCCEEEEE
T ss_pred HHHHHhhhc--------ccceEEEEEeeeeeeeeEEEeCCCCHHHHHHHHHhhCCCcEEEEEEEEEEECCCceEEeecCc
Confidence 666554433 23 799999999999999999999999999999999999999999999998777776678899
Q ss_pred EEEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHh
Q 025297 190 VEIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEA 254 (255)
Q Consensus 190 T~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~ 254 (255)
|+|+|+++|+++|++||++|+|+||||||+||| .|+.||++|+|||+||||||+..++++|.++
T Consensus 125 t~V~F~~l~~~~I~~Yv~~ge~~~kAG~y~iqg-~g~~li~~I~G~~~nVvGLPl~~l~~~L~~~ 188 (195)
T PF02545_consen 125 TKVKFRPLSDEEIEAYVESGEPLDKAGGYGIQG-LGGQLIERIEGDYSNVVGLPLEELCKLLREL 188 (195)
T ss_dssp EEEEE----HHHHHHHHCCTCCCCSCCC--SSC-GGGGTEEEEEC-HHHHHT--HHHHHHHHCCH
T ss_pred EEEEEcCCCHHHHHHHHhhccCceeeEEEeeCC-cceeeEEEEECCCCceECCCHHHHHHHHHHC
Confidence 999999999999999999999999999999999 8999999999999999999999999999753
No 27
>KOG1509 consensus Predicted nucleic acid-binding protein ASMTL [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.6e-53 Score=363.66 Aligned_cols=194 Identities=38% Similarity=0.618 Sum_probs=175.8
Q ss_pred CCCeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhcc
Q 025297 30 TPVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKSIRK--EKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIV 107 (255)
Q Consensus 30 ~~~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~~~~--~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~ 107 (255)
..++|||||+||||++|++.+|+++++++|+|+|++++. .+|.+|+..+|.+|
T Consensus 8 ~~~riiL~S~s~rrk~i~~~~G~~~~~~~S~feEnl~k~~~~~p~~yv~~tA~~K------------------------- 62 (209)
T KOG1509|consen 8 KGKRIILASASPRRKQILAEMGLNLEVVVSTFEENLIKSSFETPEDYVVETAKQK------------------------- 62 (209)
T ss_pred cCcEEEEecCCchHHHHHHHcCCceEEEeccchhhchhhccCCHHHHHHHHHHHH-------------------------
Confidence 467999999999999999999999999999999999987 79999999999999
Q ss_pred HHHHHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCC--Cc-EE
Q 025297 108 ADTAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKT--GF-RK 184 (255)
Q Consensus 108 ~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~--g~-~~ 184 (255)
|.+|.+++++.. +..+.++|+||||+..+++|+|||.|+++|.+||++|||++|.|+|||+|..... |. ..
T Consensus 63 ---A~~I~erL~~~E---d~~~~~vi~adtI~~~~~~Iyekp~d~~~a~~~l~rl~~~~~~v~t~v~l~~~~~~~g~~~~ 136 (209)
T KOG1509|consen 63 ---AEEIIERLGDGE---DSFPDVVISADTITTDGGEIYEKPVDKKDAKRMLKRLSGRPHSVFTGVALIHCSSQLGTRVS 136 (209)
T ss_pred ---HHHHHHHhhccc---cCCccccccccEEEEeccEEecCCCChhHHHHHHHHhcCCCcceeeeEEEEEecccCCceee
Confidence 555555544211 1236899999999999999999999999999999999999999999999986543 53 34
Q ss_pred EEEEEEEEEEcCCCHHHHHHHHHcCCCcccceeeeeccCCcccceeeeecccCCcccCCHHHHHHHHHHhC
Q 025297 185 GEWDRVEIQFHEIPDEVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKAVTEKLIKEAL 255 (255)
Q Consensus 185 ~~~~~T~V~F~~l~d~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~~l~~lL~~~~ 255 (255)
.++++|+|+|.++|++.|+.||++|+|++|||||+||| .|+.||++|+||++||||||+++++++|.+++
T Consensus 137 ~~~d~t~VyF~eIpee~ie~yV~sG~~lkkAGgy~Iq~-~ga~lI~~I~Gd~~nVvGLPl~~t~K~l~~~~ 206 (209)
T KOG1509|consen 137 EFYDETKVYFGEIPEEVIEEYVDSGEPLKKAGGYGIQG-LGAPLIESVVGDFDNVVGLPLELTEKLLNKVL 206 (209)
T ss_pred cceeeeEEEeccCCHHHHHHHHHcCCchhhccceeccc-ccchheeeeccCccccccCcHHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999 89999999999999999999999999998764
No 28
>cd00985 Maf_Ham1 Maf_Ham1. Maf, a nucleotide binding protein, has been implicated in inhibition of septum formation in eukaryotes, bacteria and archaea. A Ham1-related protein from Methanococcus jannaschii is a novel NTPase that has been shown to hydrolyze nonstandard nucleotides, such as hypoxanthine/xanthine NTP, but not standard nucleotides.
Probab=99.97 E-value=6e-29 Score=202.07 Aligned_cols=122 Identities=33% Similarity=0.427 Sum_probs=112.4
Q ss_pred EEEccCCHHHHHHHHhcC-CceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHHH
Q 025297 34 IILGSSSMPRRKILAEMG-YEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTAE 112 (255)
Q Consensus 34 iILASsSprR~~lL~~lg-i~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~ 112 (255)
|||||+||+|+++|+++| ++|+++++++||...+.. |.+++.++|..| |.
T Consensus 1 iiLaS~s~~R~~~l~~~~~~~~~~~~~~i~E~~~~~~-~~~~~~~~A~~K----------------------------a~ 51 (131)
T cd00985 1 LILASGSPRRLEELKQIGGIEFEVLPSDIDETGLKGE-PEDTVEELALLK----------------------------AR 51 (131)
T ss_pred CEEecCChHHHHHHHhcCCCCEEEeCCCCCCCCCCCC-HHHHHHHHHHHH----------------------------HH
Confidence 699999999999999999 999999999999998877 999999999999 66
Q ss_pred HHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 025297 113 AILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEI 192 (255)
Q Consensus 113 ~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~V 192 (255)
++.++++ +.+||++||+|+++|+|++||.+.++|.+||+.|+|++|.++|++|++.. .+..+.++++|+|
T Consensus 52 ~~~~~~~---------~~~vI~~Dt~v~~~g~~~~kp~~~~~a~~~l~~~~~r~~~~~t~v~l~~~-~~~~~~~~~~t~~ 121 (131)
T cd00985 52 AVAERLP---------DAPVIADDTGLVVDGRPGGKPARFAEALEMLRGLSGRTAEFVTAVALVDP-DGKIITFEGETEG 121 (131)
T ss_pred HHHHHCC---------CCEEEECCcEEEECCEeCcCCCCHHHHHHHHhhcCCCEEEEEEEEEEEEC-CCcEEEEEEEEEE
Confidence 6666543 36999999999999999999999999999999999999999999999964 4577889999999
Q ss_pred EE
Q 025297 193 QF 194 (255)
Q Consensus 193 ~F 194 (255)
+|
T Consensus 122 ~~ 123 (131)
T cd00985 122 KI 123 (131)
T ss_pred EE
Confidence 99
No 29
>cd00515 HAM1 NTPase/HAM1. This family consists of the HAM1 protein and pyrophosphate-releasing xanthosine/ inosine triphosphatase. HAM1 protects the cell against mutagenesis by the base analog 6-N-hydroxylaminopurine (HAP) in E. Coli and S. cerevisiae. A Ham1-related protein from Methanococcus jannaschii is a novel NTPase that has been shown to hydrolyze nonstandard nucleotides such as XTP to XMP and ITP to IMP, but not the standard nucleotides, in the presence of Mg or Mn ions. The enzyme exists as a homodimer. The HAM1 protein may be acting as an NTPase by hydrolyzing the HAP triphosphate.
Probab=92.55 E-value=3.9 Score=35.42 Aligned_cols=111 Identities=19% Similarity=0.202 Sum_probs=66.5
Q ss_pred EEEccCCHHHHH----HHHhcCCceEEEc--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhcc
Q 025297 34 IILGSSSMPRRK----ILAEMGYEFSVMA--ADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIV 107 (255)
Q Consensus 34 iILASsSprR~~----lL~~lgi~f~v~~--s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~ 107 (255)
|++||+.+.-.+ ||..++++..... .+++|..- + ..++|..|
T Consensus 1 i~~aT~N~~K~~E~~~il~~~~i~v~~~~~~~~~~E~~~---s----~~enA~~K------------------------- 48 (183)
T cd00515 1 IVFATGNKGKLKEFKEILAPFGIEVVSLKDIIDIEETGS---T----FEENALLK------------------------- 48 (183)
T ss_pred CEEECCCHHHHHHHHHHHhhcCcEEEEcCcCCCCCCCCC---C----HHHHHHHH-------------------------
Confidence 467777776644 4444455543333 34455432 3 45678889
Q ss_pred HHHHHHHHhhCCCCCCccCCCCceEEecceEEEeCC----------EEecCCCCHHHHHHHHHHhcC---CcEEEEEEEE
Q 025297 108 ADTAEAILNRLPIGDYIKEAEPTILITGDQVVVYEG----------VIREKPSSREEARRFIKDYSG---GQCATVSSVL 174 (255)
Q Consensus 108 ~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg----------~Il~KP~d~eeA~~~L~~lSG---~~h~v~T~v~ 174 (255)
|..+++.+. .+||+=||=+.++. ...+.-.+.+....+|..|++ |+..+.+.+|
T Consensus 49 ---A~~a~~~~~----------~pviadDsGL~i~aL~g~PG~ys~r~~~~~~~~~~~~~ll~~l~~~~~r~A~~~~~i~ 115 (183)
T cd00515 49 ---ARAAAEALG----------LPVLADDSGLCVDALNGFPGVYSARFAGEHDDAENNEKLLELLEGDEDRSAYFVCVIA 115 (183)
T ss_pred ---HHHHHHHHC----------CCEEEeccEEEEeccCCCCchhhhhhcCCCCHHHHHHHHHHHccCCCCCeEEEEEEEE
Confidence 555555432 47999999887653 223211345677888898986 7788888888
Q ss_pred EEecCCCcEEEEEEEE
Q 025297 175 VTNLKTGFRKGEWDRV 190 (255)
Q Consensus 175 l~~~~~g~~~~~~~~T 190 (255)
++. +.+....+.-.+
T Consensus 116 ~~~-~~~~~~~f~G~~ 130 (183)
T cd00515 116 LVD-PDGEPLVFEGEV 130 (183)
T ss_pred EEe-CCCCEEEEEEEE
Confidence 875 334444444333
No 30
>PRK00120 dITP/XTP pyrophosphatase; Reviewed
Probab=92.04 E-value=7.9 Score=33.97 Aligned_cols=115 Identities=16% Similarity=0.184 Sum_probs=68.2
Q ss_pred CeEEEccCCHHHHH----HHHhcCCceEEEcC-CC--CCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhh
Q 025297 32 VKIILGSSSMPRRK----ILAEMGYEFSVMAA-DI--DEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTI 104 (255)
Q Consensus 32 ~~iILASsSprR~~----lL~~lgi~f~v~~s-~i--DE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~ 104 (255)
++|++||+-+.-.+ ||..+|+ ++.+. ++ +|-.-...+ ...+|..|
T Consensus 1 m~i~~aT~N~~K~~E~~~il~~~~~--~i~~~~~~~~~e~~E~~~s----~~enA~~K---------------------- 52 (196)
T PRK00120 1 MKIVLASHNAGKLRELKALLAPFGI--EVVSQGELGVPEPEETGTT----FVENALIK---------------------- 52 (196)
T ss_pred CEEEEEcCCHHHHHHHHHHHhhcCC--EEEehhhcCCCCCCCCCCC----HHHHHHHH----------------------
Confidence 36999999987754 4444554 44432 23 221111223 45677889
Q ss_pred hccHHHHHHHHhhCCCCCCccCCCCceEEecceEEEeCC----------EEecC-CCCHHHHHHHHHHhcC-----CcEE
Q 025297 105 LIVADTAEAILNRLPIGDYIKEAEPTILITGDQVVVYEG----------VIREK-PSSREEARRFIKDYSG-----GQCA 168 (255)
Q Consensus 105 ~~~~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg----------~Il~K-P~d~eeA~~~L~~lSG-----~~h~ 168 (255)
|..+++.+. .+||+=||=+.++. ...|+ ..+.+....+|+.|.+ |+.+
T Consensus 53 ------A~~~~~~~~----------~pviaDDSGL~i~aL~g~PGvysar~~g~~~~~~~~~~~ll~~l~~~~~~~R~A~ 116 (196)
T PRK00120 53 ------ARHAAKATG----------LPALADDSGLCVDALGGAPGVYSARYAGEGASDAANNEKLLEELKGVPDEDRRAR 116 (196)
T ss_pred ------HHHHHHHHC----------CCEEEEcCEEEEcccCCCCchhhHHHhCcCCCHHHHHHHHHHHhhCCCCCCCcEE
Confidence 555555432 36999999887653 23332 2255667778888865 6778
Q ss_pred EEEEEEEEecCCCcEEEEEEEEE
Q 025297 169 TVSSVLVTNLKTGFRKGEWDRVE 191 (255)
Q Consensus 169 v~T~v~l~~~~~g~~~~~~~~T~ 191 (255)
+.+++|++.. .+....+...+.
T Consensus 117 ~~~~i~~~~~-~~~~~~f~G~~~ 138 (196)
T PRK00120 117 FVCVLVLVRP-DPTPLVAEGRWE 138 (196)
T ss_pred EEEEEEEEEC-CCCEEEEEEEEE
Confidence 8888888854 444444444443
No 31
>PRK14822 nucleoside-triphosphatase; Provisional
Probab=91.58 E-value=7.4 Score=34.30 Aligned_cols=113 Identities=16% Similarity=0.202 Sum_probs=65.1
Q ss_pred eEEEccCCHHHHHHHHh-cC-CceEEEcCC-CCCC-CCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccH
Q 025297 33 KIILGSSSMPRRKILAE-MG-YEFSVMAAD-IDEK-SIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVA 108 (255)
Q Consensus 33 ~iILASsSprR~~lL~~-lg-i~f~v~~s~-iDE~-~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~ 108 (255)
+|++||+-+.-.+=++. ++ +.+++++.. +... .++ ++ ..-...+|..|
T Consensus 3 ~i~~aT~N~~K~~E~~~iL~~~~~~i~~~~~~~~~~e~~-E~-g~t~~enA~~K-------------------------- 54 (200)
T PRK14822 3 EIVIATKNKGKVREFKEIFEKFDIEVKSLADFPPIPEVE-ET-GTTFEENAILK-------------------------- 54 (200)
T ss_pred eEEEECCCHHHHHHHHHHHhhcCcEEEEchhcCCCCCCC-CC-CCCHHHHHHHH--------------------------
Confidence 69999999987654444 22 234444322 2110 111 10 01245678889
Q ss_pred HHHHHHHhhCCCCCCccCCCCceEEecceEEEeC---C-------EEecC-CCCHHHHHHHHHHhcC-----CcEEEEEE
Q 025297 109 DTAEAILNRLPIGDYIKEAEPTILITGDQVVVYE---G-------VIREK-PSSREEARRFIKDYSG-----GQCATVSS 172 (255)
Q Consensus 109 ~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~d---g-------~Il~K-P~d~eeA~~~L~~lSG-----~~h~v~T~ 172 (255)
|..+++... .+||+=||=+.++ | ...|+ ..|.+....+|..|.+ |+.++.+.
T Consensus 55 --A~~~~~~~~----------~pviaDDSGL~v~AL~G~PGvysar~~g~~~~d~~~~~~ll~~l~~~~~~~R~A~f~~~ 122 (200)
T PRK14822 55 --AEAAAKALN----------KPVIADDSGLEVDALNGAPGVYSARYAGEAKDDAANNEKLLKELGGVPFEKRTARFHCV 122 (200)
T ss_pred --HHHHHHHHC----------CCEEEeccEEEEcccCCCCceechhhcCCCCCHHHHHHHHHHHhhCCCCCCCcEEEEEE
Confidence 555555432 3689999988765 3 23332 2366677788898876 46788888
Q ss_pred EEEEecCCCcEEEE
Q 025297 173 VLVTNLKTGFRKGE 186 (255)
Q Consensus 173 v~l~~~~~g~~~~~ 186 (255)
+|++. +.+....+
T Consensus 123 ia~~~-~~~~~~~f 135 (200)
T PRK14822 123 IAVAF-PGGETKTV 135 (200)
T ss_pred EEEEe-CCCCEEEE
Confidence 88874 34443333
No 32
>PRK14824 putative deoxyribonucleotide triphosphate pyrophosphatase; Provisional
Probab=91.42 E-value=9.6 Score=33.66 Aligned_cols=101 Identities=16% Similarity=0.235 Sum_probs=62.1
Q ss_pred eEEEccCCHHHHHHHHh-cC-CceEEEcC----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhc
Q 025297 33 KIILGSSSMPRRKILAE-MG-YEFSVMAA----DIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILI 106 (255)
Q Consensus 33 ~iILASsSprR~~lL~~-lg-i~f~v~~s----~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~ 106 (255)
+|++||+-+.-.+=++. ++ +.+++++. +++|.. . -...+|..|
T Consensus 2 ~i~~aT~N~~K~~E~~~iL~~~~i~v~~~~~~~e~~E~~---~----tf~eNA~~K------------------------ 50 (201)
T PRK14824 2 KILLATTNEGKVREIKRLLSDLGIEVLSPDKKIEVEEDG---E----TFLENAYLK------------------------ 50 (201)
T ss_pred EEEEECCChHHHHHHHHHHhhcCCEEEEcCcCCCCCCCC---C----CHHHHHHHH------------------------
Confidence 69999999987554443 21 23445443 233322 1 345678889
Q ss_pred cHHHHHHHHhhCCCCCCccCCCCceEEecceEEEeC---CE-------Ee-----c-----CCCCHHHHHHHHHHhcC--
Q 025297 107 VADTAEAILNRLPIGDYIKEAEPTILITGDQVVVYE---GV-------IR-----E-----KPSSREEARRFIKDYSG-- 164 (255)
Q Consensus 107 ~~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~d---g~-------Il-----~-----KP~d~eeA~~~L~~lSG-- 164 (255)
|..+++... .+||+=||=+.++ |. .. | +..|.+....+|..|.+
T Consensus 51 ----A~~~~~~~~----------~pviaDDSGL~vdAL~G~PGvysar~~~~~~~g~~~~~~~~d~~~~~~ll~~l~~~~ 116 (201)
T PRK14824 51 ----ARAYAEFYK----------IPVLADDSGLEVPALEGYPGVYSSRFYQIEFGGKEEVVESKDEANIRKLLRLLEGKQ 116 (201)
T ss_pred ----HHHHHHHHC----------CCEEEeccEEEecccCCCCceeeHHHhhhcccCccccccCCHHHHHHHHHHHccCCC
Confidence 555554432 3588899888754 32 22 2 13455677778888876
Q ss_pred -CcEEEEEEEEEEec
Q 025297 165 -GQCATVSSVLVTNL 178 (255)
Q Consensus 165 -~~h~v~T~v~l~~~ 178 (255)
|..++.+++|++..
T Consensus 117 ~R~A~f~c~ia~~~~ 131 (201)
T PRK14824 117 NRKARFVAFVVLYFG 131 (201)
T ss_pred CCcEEEEEEEEEEEC
Confidence 67888888888753
No 33
>TIGR00042 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family. Saccharomyces cerevisiae HAM1 protects against the mutagenic effects of the base analog 6-N-hydroxylaminopurine, which can be a natural product of monooxygenase activity on adenine. Methanococcus jannaschii MJ0226 and E. coli RdgB are also characterized as pyrophosphatases active against non-standard purines NTPs. E. coli RdgB appears to act by intercepting non-canonical deoxyribonucleotide triphosphates from replication precursor pools.
Probab=90.96 E-value=9.9 Score=33.00 Aligned_cols=115 Identities=18% Similarity=0.133 Sum_probs=66.2
Q ss_pred eEEEccCCHHHHH----HHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccH
Q 025297 33 KIILGSSSMPRRK----ILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVA 108 (255)
Q Consensus 33 ~iILASsSprR~~----lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~ 108 (255)
+|++||+.+.-.+ ||..+|+. .+...+++|-.....+. .++|..|
T Consensus 1 ~i~~aT~N~~K~~E~~~il~~~~~~-~~~~~~~~~~ee~g~t~----~enA~~K-------------------------- 49 (184)
T TIGR00042 1 KIVFATGNPGKLKEVQSILSDLGDN-EIEQLDLGYPEETGLTF----EENALLK-------------------------- 49 (184)
T ss_pred CEEEECCCHHHHHHHHHHHhhcCCE-EEecccCCCCCCCCCCH----HHHHHHH--------------------------
Confidence 3889999887754 44444542 23334454322223333 4677889
Q ss_pred HHHHHHHhhCCCCCCccCCCCceEEecceEEEeC---CE--EecCC---CCHHHHHHHHHHhcC---CcEEEEEEEEEEe
Q 025297 109 DTAEAILNRLPIGDYIKEAEPTILITGDQVVVYE---GV--IREKP---SSREEARRFIKDYSG---GQCATVSSVLVTN 177 (255)
Q Consensus 109 ~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~d---g~--Il~KP---~d~eeA~~~L~~lSG---~~h~v~T~v~l~~ 177 (255)
|..+++... .++|+=||=+.++ |. |+-|. .|.+.-..+|..|.+ |+.++.+.+|+..
T Consensus 50 --A~~~~~~~~----------~pvlaDDSGL~v~AL~G~PGvysar~~~~d~~~~~~ll~~l~~~~~R~A~f~~~l~~~~ 117 (184)
T TIGR00042 50 --AKHAAKILN----------KPVIAEDSGLFVDALNGFPGIYSARYQGTDIGNLEKILKLLEGVENRQAYFVCVIGYCD 117 (184)
T ss_pred --HHHHHHHhC----------CCeEEcccEEEEhhcCCCcchhhHHHhcChHHHHHHHHHHcCCCCCCcEEEEEEEEEEe
Confidence 555555432 3688889888754 31 11111 334555778888876 7788888888885
Q ss_pred cCCCcEEEEEEEEE
Q 025297 178 LKTGFRKGEWDRVE 191 (255)
Q Consensus 178 ~~~g~~~~~~~~T~ 191 (255)
+.+....+...+.
T Consensus 118 -~~~~~~~f~G~~~ 130 (184)
T TIGR00042 118 -PNGEPLVFEGIVK 130 (184)
T ss_pred -CCCCEEEEEEEEE
Confidence 3444444433333
No 34
>PRK14823 putative deoxyribonucleoside-triphosphatase; Provisional
Probab=90.91 E-value=10 Score=33.11 Aligned_cols=100 Identities=13% Similarity=0.214 Sum_probs=62.0
Q ss_pred eEEEccCCHHHHHHHHh-cCCceEEEcC-------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhh
Q 025297 33 KIILGSSSMPRRKILAE-MGYEFSVMAA-------DIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTI 104 (255)
Q Consensus 33 ~iILASsSprR~~lL~~-lgi~f~v~~s-------~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~ 104 (255)
+|++||+-+.-.+=++. ++-.+++++. ++.|.. .+ -.++|..|
T Consensus 2 ki~~aT~N~~K~~E~~~il~~~~~v~~~~~~~~~~~~~E~~---~t----f~enA~~K---------------------- 52 (191)
T PRK14823 2 KLVFATNNKHKLEEIRSILPEKIELLSLSDIGCHEDIPETA---DT----LEGNALLK---------------------- 52 (191)
T ss_pred EEEEECCChhHHHHHHHHhcCCCEEEehhhcCCCCCCCCCC---CC----HHHHHHHH----------------------
Confidence 69999999876554554 4323454422 333321 22 45678889
Q ss_pred hccHHHHHHHHhhCCCCCCccCCCCceEEecceEEEeC---C-------EEecCCC-CHHHHHHHHHHhcC---CcEEEE
Q 025297 105 LIVADTAEAILNRLPIGDYIKEAEPTILITGDQVVVYE---G-------VIREKPS-SREEARRFIKDYSG---GQCATV 170 (255)
Q Consensus 105 ~~~~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~d---g-------~Il~KP~-d~eeA~~~L~~lSG---~~h~v~ 170 (255)
|..+++... .+||+=||=+.++ | +..|... +.+.-..+|+.|.+ |+.++.
T Consensus 53 ------A~~~~~~~~----------~pvlaDDSGL~v~aL~G~PGvysar~~g~~~~~~~~~~~ll~~l~~~~~R~A~f~ 116 (191)
T PRK14823 53 ------AEYVYKKYG----------YDCFADDTGLEVEALNGAPGVYSARYAGGEHNAEANMRKLLEELEGKDNRKAQFR 116 (191)
T ss_pred ------HHHHHHHHC----------CCEEEecCEEEEeccCCCcchHHHHHhCcCCCHHHHHHHHHHHccCCCCCcEEEE
Confidence 555555432 3699999988765 3 3444433 44445668888876 778888
Q ss_pred EEEEEEe
Q 025297 171 SSVLVTN 177 (255)
Q Consensus 171 T~v~l~~ 177 (255)
+++|++.
T Consensus 117 c~i~~~~ 123 (191)
T PRK14823 117 TVIALIL 123 (191)
T ss_pred EEEEEEe
Confidence 8888874
No 35
>PF01725 Ham1p_like: Ham1 family; InterPro: IPR002637 This family contains the Saccharomyces cerevisiae (Baker's yeast) HAM1 protein P47119 from SWISSPROT and other hypothetical archaeal, bacterial and Caenorhabditis elegans proteins. S. cerevisiae HAM1 protects against the mutagenic effects of the base analog 6-N-hydroxylaminopurine (HAP) which can be a natural product of monooxygenase activity on adenine. HAM1 protein protects the cell from HAP, either on the level of deoxynucleoside triphosphate or the DNA level by a yet unidentified set of reactions [].; GO: 0016787 hydrolase activity; PDB: 3TQU_A 1VP2_B 3S86_D 1B78_A 2MJP_B 2Q16_A 2PYU_A 1K7K_A 2ZTI_A 2DVP_A ....
Probab=89.35 E-value=4.6 Score=35.05 Aligned_cols=64 Identities=17% Similarity=0.120 Sum_probs=43.2
Q ss_pred ceEEecceEEEeC---CE--EecCCC------CHHHHHHHHHHhcCC---cEEEEEEEEEEecCCCcEEEEEEEEEEEE
Q 025297 130 TILITGDQVVVYE---GV--IREKPS------SREEARRFIKDYSGG---QCATVSSVLVTNLKTGFRKGEWDRVEIQF 194 (255)
Q Consensus 130 ~iVI~aDTVV~~d---g~--Il~KP~------d~eeA~~~L~~lSG~---~h~v~T~v~l~~~~~g~~~~~~~~T~V~F 194 (255)
..||+-||=+.++ |. ++-|-. +.+.....|+.|++. +..+.+.+|++. +.+....+..++.=+.
T Consensus 62 ~pvi~dDSGL~v~aL~g~PG~~s~r~~g~~~~~~~~~~~ll~~l~~~~~R~A~~~~~ia~~~-~~~~~~~f~G~~~G~I 139 (189)
T PF01725_consen 62 KPVIADDSGLEVDALNGFPGVYSARFAGPEATDEEGNEKLLKLLSGLEDRRAYFRCVIALAD-PDGEIKVFEGEVEGTI 139 (189)
T ss_dssp SSEEEEEEEEEEGGGTTTBGGGHCCCC-TTS-HHHHHHHHHHHTTTSSG-EEEEEEEEEEEE-TTTTEEEEEEEEEEEE
T ss_pred CCEEEeCcEEeHhhhCCCcCCceEEEecCCCCHHHHHHHHHHHhcCCCCCeEEEEEEEEEEE-CCCCEEEEEEEEEEEE
Confidence 3599999999875 41 333333 567777788888874 577788888887 5565666665555444
No 36
>PRK02491 putative deoxyribonucleotide triphosphate pyrophosphatase/unknown domain fusion protein; Reviewed
Probab=87.58 E-value=27 Score=33.34 Aligned_cols=122 Identities=16% Similarity=0.245 Sum_probs=71.6
Q ss_pred CCCCCCChHHHHhhhcccccCCCCCeEEEccCCHHHHH----HHHhcCCceEEEcCC----CCCCCCCCCCHHHHHHHHH
Q 025297 8 RPDSPVSPSEFRQSLGNMEASATPVKIILGSSSMPRRK----ILAEMGYEFSVMAAD----IDEKSIRKEKPEDLVMAIA 79 (255)
Q Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~~~~iILASsSprR~~----lL~~lgi~f~v~~s~----iDE~~~~~~~p~~~v~~lA 79 (255)
-|..-||...|-.. .+.+-..+|++||+-+.-.+ ||..+|+ ++++.. ..|-.-...+ -.++|
T Consensus 108 ~~~~~~~~~~~~~~----~~~~~~~kIv~AT~N~~K~~E~~~iL~~~~i--ev~~l~~~~~~~Ei~Etg~T----f~ENA 177 (328)
T PRK02491 108 LPKEGVSTADFFGT----SKQGFGDTILIATRNEGKTKEFRKLFGKLGY--KVENLNDYPDLPEVAETGMT----FEENA 177 (328)
T ss_pred cCCCCccHHHHhcc----ccccCCCeEEEEcCChhHHHHHHHHHhhcCc--EEEehhhcCCCCCcCCCCCC----HHHHH
Confidence 36677777765332 23445568999999987654 4444454 444332 1121111222 45678
Q ss_pred HHHHHHHHHhhhhhccccccchhhhhccHHHHHHHHhhCCCCCCccCCCCceEEecceEEEe---CC-------EEecCC
Q 025297 80 EAKAAAIISKLQITDSQLGNVKQTILIVADTAEAILNRLPIGDYIKEAEPTILITGDQVVVY---EG-------VIREKP 149 (255)
Q Consensus 80 ~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~---dg-------~Il~KP 149 (255)
..| |..+++... ..||+=||=+.+ +| +..|..
T Consensus 178 ~~K----------------------------A~~aa~~~g----------~pvLADDSGL~VdAL~G~PGvySARfaG~~ 219 (328)
T PRK02491 178 RLK----------------------------AETISRLTG----------KMVLADDSGLKVDALGGLPGVWSARFSGPD 219 (328)
T ss_pred HHH----------------------------HHHHHHHHC----------CCEEEEccEEEEcccCCCCcccchhhcCCC
Confidence 889 555554432 358888887765 34 344532
Q ss_pred -CCHHHHHHHHHHhc------CCcEEEEEEEEEEe
Q 025297 150 -SSREEARRFIKDYS------GGQCATVSSVLVTN 177 (255)
Q Consensus 150 -~d~eeA~~~L~~lS------G~~h~v~T~v~l~~ 177 (255)
.+.+.-..+|..|. .|+.+++|++|++.
T Consensus 220 ~~d~~n~~kLL~~L~~~~~~~dR~A~Fvc~lal~~ 254 (328)
T PRK02491 220 ATDAENNAKLLHELAMVFDLKDRSAQFHTTLVVAA 254 (328)
T ss_pred CCHHHHHHHHHHHhhCCCCCCCCcEEEEEEEEEEe
Confidence 35555566777774 37788889888875
No 37
>PRK14821 putative deoxyribonucleotide triphosphate pyrophosphatase; Provisional
Probab=86.45 E-value=21 Score=30.97 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=59.6
Q ss_pred eEEEccCCHHHHH----HHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccH
Q 025297 33 KIILGSSSMPRRK----ILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVA 108 (255)
Q Consensus 33 ~iILASsSprR~~----lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~ 108 (255)
+|++||+-+.-.+ ||..+|+ ++.+...+ ++ +....--..+|..|
T Consensus 2 ~i~~aT~N~~K~~E~~~il~~~~i--~v~~~~~~---~~-E~~~~t~~enA~~K-------------------------- 49 (184)
T PRK14821 2 KIYFATGNKGKVEEAKIILKPLGI--EVEQIKIE---YP-EIQADTLEEVAAFG-------------------------- 49 (184)
T ss_pred EEEEECCChhHHHHHHHHHhhcCc--EEEECCCC---CC-CCCCCCHHHHHHHH--------------------------
Confidence 6999999988754 4444454 44443322 11 11112345678889
Q ss_pred HHHHHHHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCC-------CHHHHHHHHHHhcC---CcEEEEEEEEEEe
Q 025297 109 DTAEAILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPS-------SREEARRFIKDYSG---GQCATVSSVLVTN 177 (255)
Q Consensus 109 ~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~-------d~eeA~~~L~~lSG---~~h~v~T~v~l~~ 177 (255)
|..+++... .+||+=||=+.++. .=|.|. +......+|..|.+ |+.++.+.+|++.
T Consensus 50 --A~~~~~~~~----------~pvlaDDSGL~v~a-L~g~PGvysa~~~~~~~~~~ll~~l~~~~~R~A~f~~~ia~~~ 115 (184)
T PRK14821 50 --AKWVYNKLN----------RPVIVEDSGLFIEA-LNGFPGPYSAFVYKTLGNEGILKLLEGEENRRAYFKSVIGYCD 115 (184)
T ss_pred --HHHHHHHHC----------CCEEEEcCEEeehh-hCCCCcHHHHHHHHHHHHHHHHHHccCCCCCeEEEEEEEEEEE
Confidence 555555432 36888898776432 113333 34556677888886 6788888888875
No 38
>PRK14826 putative deoxyribonucleotide triphosphate pyrophosphatase; Provisional
Probab=74.16 E-value=66 Score=28.83 Aligned_cols=108 Identities=20% Similarity=0.316 Sum_probs=62.5
Q ss_pred CCCeEEEccCCHHHHH----HHHhcCCceEEEc-------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccc
Q 025297 30 TPVKIILGSSSMPRRK----ILAEMGYEFSVMA-------ADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLG 98 (255)
Q Consensus 30 ~~~~iILASsSprR~~----lL~~lgi~f~v~~-------s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~ 98 (255)
...+|++||+-+.-.+ ||..++-.+++++ .++.|.. .+ -..+|..|
T Consensus 7 ~~~~i~~aT~N~~K~~E~~~iL~~~~~~i~v~~~~~~~~~~~~~E~~---~t----f~eNA~~K---------------- 63 (222)
T PRK14826 7 ETITIVLATGNRDKVRELRPLLEHISPLFSVRSLADLGVEVDIEETE---ET----LEGNALLK---------------- 63 (222)
T ss_pred CCCEEEEEcCChhHHHHHHHHHHhcCCCeEEEehhHcCCCCCCCCCC---CC----HHHHHHHH----------------
Confidence 3568999999987654 4444421244443 1233332 12 44678889
Q ss_pred cchhhhhccHHHHHHHHhhCCCCCCccCCCCceEEecceEEEeC---C-------EEe----cC-CCCHHHHHHHHHHhc
Q 025297 99 NVKQTILIVADTAEAILNRLPIGDYIKEAEPTILITGDQVVVYE---G-------VIR----EK-PSSREEARRFIKDYS 163 (255)
Q Consensus 99 ~~~~~~~~~~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~d---g-------~Il----~K-P~d~eeA~~~L~~lS 163 (255)
|..+++..... .+..+||+=||=+.++ | +.. |+ ..|.+....+|+.|.
T Consensus 64 ------------A~~~~~~~~~~-----~~~~~vlaDDSGL~vdAL~G~PGvySarf~~~~~G~~~~d~~~~~~LL~~l~ 126 (222)
T PRK14826 64 ------------ADAIFELLSDR-----FPFLIALADDTGLEVDALGGAPGVYSARFAPVPEGEKPTYEDNVRHLLSEME 126 (222)
T ss_pred ------------HHHHHHHhCCc-----ccCCcEEEecCcEEEcccCCCCceehHhhhhhccCCCcCHHHHHHHHHHHcc
Confidence 44444443210 0124788888877653 3 122 32 234455677888888
Q ss_pred C---CcEEEEEEEEEEe
Q 025297 164 G---GQCATVSSVLVTN 177 (255)
Q Consensus 164 G---~~h~v~T~v~l~~ 177 (255)
+ |+.++++++|++.
T Consensus 127 ~~~~R~A~f~c~ia~~~ 143 (222)
T PRK14826 127 GKTERSARFRTVIALKG 143 (222)
T ss_pred CCCCCcEEEEEEEEEEE
Confidence 6 6788888888874
No 39
>COG0127 Xanthosine triphosphate pyrophosphatase [Nucleotide transport and metabolism]
Probab=67.63 E-value=88 Score=27.64 Aligned_cols=112 Identities=19% Similarity=0.149 Sum_probs=67.4
Q ss_pred CeEEEccCCHHHHH----HHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhcc
Q 025297 32 VKIILGSSSMPRRK----ILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIV 107 (255)
Q Consensus 32 ~~iILASsSprR~~----lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~ 107 (255)
++|+|||+=+--.+ ||...|+++.......+|- .-+.....-.+.|..|
T Consensus 2 ~ki~~AT~N~~K~~E~~~il~~~~~ei~~~~~~~~~~--e~eEtg~tf~enA~~K------------------------- 54 (194)
T COG0127 2 MKIVLATGNKGKLRELKSILAPGGIEIESLKELGVEI--EVEETGLTFEENALLK------------------------- 54 (194)
T ss_pred cEEEEEcCChHHHHHHHHHhcccCceEEEccccCCCC--CccchhhHHHHHHHHH-------------------------
Confidence 47999999887644 3444334444333222221 1112334566788889
Q ss_pred HHHHHHHHhhCCCCCCccCCCCceEEecceEEEeC---C-------EEecCCCCHHHHHHHHHHhcCC---cEEEEEEEE
Q 025297 108 ADTAEAILNRLPIGDYIKEAEPTILITGDQVVVYE---G-------VIREKPSSREEARRFIKDYSGG---QCATVSSVL 174 (255)
Q Consensus 108 ~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~d---g-------~Il~KP~d~eeA~~~L~~lSG~---~h~v~T~v~ 174 (255)
|.++++.. ...||+=||=+..+ | ...|-..|.......|+.|+|. +.+.+|.++
T Consensus 55 ---a~~~a~~~----------g~pviaDDSGL~v~aL~G~PGvYSar~~~~~~d~~~~~klL~~l~~~~~R~A~F~~vi~ 121 (194)
T COG0127 55 ---ARAAAKAT----------GLPVIADDSGLCVDALNGFPGVYSARFAGEADDTIGNEKLLKLLEGVPDRSAYFVCVIV 121 (194)
T ss_pred ---HHHHHhhc----------CCcEEEecCceEEeccCCCCcceeehhcccCchhhhHHHHHHHhcCCCCceEEEEEEEE
Confidence 55554431 35788888877643 3 3555556677788889999854 678888888
Q ss_pred EEecCCCcEE
Q 025297 175 VTNLKTGFRK 184 (255)
Q Consensus 175 l~~~~~g~~~ 184 (255)
+.. +.+...
T Consensus 122 ~~~-~~~~~~ 130 (194)
T COG0127 122 LAR-DGGEPI 130 (194)
T ss_pred EEe-CCCcEE
Confidence 865 444433
No 40
>PRK14825 putative deoxyribonucleotide triphosphate pyrophosphatase; Provisional
Probab=66.17 E-value=93 Score=27.35 Aligned_cols=115 Identities=12% Similarity=0.120 Sum_probs=64.5
Q ss_pred eEEEccCCHHHHHHHHh-cC-CceEE-EcCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhcc
Q 025297 33 KIILGSSSMPRRKILAE-MG-YEFSV-MAAD--IDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIV 107 (255)
Q Consensus 33 ~iILASsSprR~~lL~~-lg-i~f~v-~~s~--iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~ 107 (255)
+|++||+-+.-.+=++. ++ ..+.+ ...+ +.|.. . --..+|..|
T Consensus 3 ~i~~aT~N~~K~~E~~~il~~~~~~i~~~~~~~~~E~~---~----tf~enA~~K------------------------- 50 (199)
T PRK14825 3 TLFFATTNINKINEVKQILDIPNIKIEIPQNFDIKETG---K----TFKENSLLK------------------------- 50 (199)
T ss_pred eEEEECCChhHHHHHHHHHhhcCceEeecccCCCCCCC---C----CHHHHHHHH-------------------------
Confidence 59999998876544443 33 22322 2233 33332 1 245678889
Q ss_pred HHHHHHHHhhCCCCCCccCCCCceEEecceEEEeC---C-------E----EecCC-CCHHHHHHHHHHhcC---CcEEE
Q 025297 108 ADTAEAILNRLPIGDYIKEAEPTILITGDQVVVYE---G-------V----IREKP-SSREEARRFIKDYSG---GQCAT 169 (255)
Q Consensus 108 ~~~a~~v~~~~~~~~~~~~~~~~iVI~aDTVV~~d---g-------~----Il~KP-~d~eeA~~~L~~lSG---~~h~v 169 (255)
|..+++.... ..+||+=||=+.++ | . .+|+- .+.+....+|+.|.+ |+.++
T Consensus 51 ---A~~~~~~~~~--------~~pvlaDDSGL~vdAL~G~PGvysar~~~~~~G~~~~~~~~~~~lL~~l~~~~~R~A~f 119 (199)
T PRK14825 51 ---AKALFEILNN--------KQPVFSEDSGLCIEALNLEPGIYSKRYDQYKLGKKLSTNEKNHLIIDLMKNEKNRTAYF 119 (199)
T ss_pred ---HHHHHHHHCC--------CCcEEEecCeEEEhhhCCCCceeeHhhhhhccCCCCCHHHHHHHHHHHcCCCCCCcEEE
Confidence 4444443220 13577778776643 3 1 22432 455566778888876 77888
Q ss_pred EEEEEEEecCCCcEEEEEEEEE
Q 025297 170 VSSVLVTNLKTGFRKGEWDRVE 191 (255)
Q Consensus 170 ~T~v~l~~~~~g~~~~~~~~T~ 191 (255)
++++|++. +.+....+.....
T Consensus 120 ~~~l~~~~-~~~~~~~f~G~~~ 140 (199)
T PRK14825 120 ICNISYIS-KDGTILNFEGIIK 140 (199)
T ss_pred EEEEEEEE-CCCCEEEEEEEEE
Confidence 89888885 3444444433333
No 41
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=65.17 E-value=4.3 Score=29.31 Aligned_cols=34 Identities=29% Similarity=0.452 Sum_probs=28.0
Q ss_pred CChHHHHhhhcccccCCCCCeEEEccCCHHHHHHHHhcCCceEEEcCCCCCCC
Q 025297 13 VSPSEFRQSLGNMEASATPVKIILGSSSMPRRKILAEMGYEFSVMAADIDEKS 65 (255)
Q Consensus 13 ~~~~~~~~~l~~~~~~~~~~~iILASsSprR~~lL~~lgi~f~v~~s~iDE~~ 65 (255)
.||-++|+.|-- ...|.+.||.|..+|...||+.
T Consensus 4 asPv~LR~~lE~-------------------A~~La~~GIRFVpiPv~~dee~ 37 (61)
T PF07131_consen 4 ASPVDLRKALEM-------------------AHSLAHIGIRFVPIPVVTDEEF 37 (61)
T ss_pred ccHHHHHHHHHH-------------------HHHHHHcCceeeccccccHHHH
Confidence 578888888765 4579999999999999888863
No 42
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase. multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).
Probab=44.71 E-value=38 Score=31.45 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=30.7
Q ss_pred CCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHH
Q 025297 39 SSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAE 80 (255)
Q Consensus 39 sSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~ 80 (255)
+-..|.++|+++|++..++. +|++. +...+|++++..+-.
T Consensus 55 ~~~~k~~~l~~~Gvd~~~~~-~F~~~-~a~ls~e~Fi~~~l~ 94 (288)
T TIGR00083 55 PLEDKARQLQIKGVEQLLVV-VFDEE-FANLSALQFIDQLIV 94 (288)
T ss_pred CHHHHHHHHHHcCCCEEEEe-CCCHH-HHcCCHHHHHHHHHH
Confidence 34789999999999876553 48774 667899999987654
No 43
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme. FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.
Probab=44.12 E-value=38 Score=28.78 Aligned_cols=38 Identities=13% Similarity=0.348 Sum_probs=26.9
Q ss_pred CCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHH
Q 025297 39 SSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAI 78 (255)
Q Consensus 39 sSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~l 78 (255)
+-..|.++|+++|++..++ .+|++. +...+|+++...+
T Consensus 57 ~~e~R~~~l~~l~vd~v~~-~~f~~~-~~~~s~~~Fi~~i 94 (180)
T cd02064 57 TLEEKLELLESLGVDYLLV-LPFDKE-FASLSAEEFVEDL 94 (180)
T ss_pred CHHHHHHHHHHcCCCEEEE-eCCCHH-HHcCCHHHHHHHH
Confidence 4478999999999765444 467774 4556788777654
No 44
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=41.75 E-value=1.1e+02 Score=25.31 Aligned_cols=55 Identities=18% Similarity=0.222 Sum_probs=36.1
Q ss_pred eCCEEecCCCCHHHHHHHHHHhcCCcEE----EE--------EEEEEEecCCCcEEEEEEEEEEEEc
Q 025297 141 YEGVIREKPSSREEARRFIKDYSGGQCA----TV--------SSVLVTNLKTGFRKGEWDRVEIQFH 195 (255)
Q Consensus 141 ~dg~Il~KP~d~eeA~~~L~~lSG~~h~----v~--------T~v~l~~~~~g~~~~~~~~T~V~F~ 195 (255)
++---++.|.++.||.+.+..|..+... |. .+|.|++..++..+..+...++.|-
T Consensus 9 LGct~V~aP~sE~e~~r~m~~l~~~s~~~~i~Vtl~Vp~~seG~V~l~D~~t~~~ias~~I~rI~fC 75 (125)
T cd01211 9 LGCSQLVNPDSENEMKRLMKVLDEQSGAQTINVTLVVPNNIEGTVKLIDAQSNKVIASFSIVNIRFC 75 (125)
T ss_pred eeeEEecCCCCHHHHHHHHHHHHhhcccCCeEEEEEecCCCCceEEEEcCCCCcEEEEEEEEEEEEE
Confidence 4445678999999999988887544322 11 2366666555566666677777773
No 45
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=41.37 E-value=59 Score=24.98 Aligned_cols=30 Identities=23% Similarity=0.312 Sum_probs=24.0
Q ss_pred eEEEccCCHHHHHHHHhcCCceEEEcCCCC
Q 025297 33 KIILGSSSMPRRKILAEMGYEFSVMAADID 62 (255)
Q Consensus 33 ~iILASsSprR~~lL~~lgi~f~v~~s~iD 62 (255)
+||....|+.|+++++++|....+...+.|
T Consensus 16 ~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~ 45 (130)
T PF00107_consen 16 KVIATDRSEEKLELAKELGADHVIDYSDDD 45 (130)
T ss_dssp EEEEEESSHHHHHHHHHTTESEEEETTTSS
T ss_pred EEEEEECCHHHHHHHHhhcccccccccccc
Confidence 689999999999999999976665544444
No 46
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=39.56 E-value=33 Score=29.50 Aligned_cols=28 Identities=39% Similarity=0.500 Sum_probs=23.5
Q ss_pred CeEEEccCCHHH-----HHHHHhcCCceEEEcC
Q 025297 32 VKIILGSSSMPR-----RKILAEMGYEFSVMAA 59 (255)
Q Consensus 32 ~~iILASsSprR-----~~lL~~lgi~f~v~~s 59 (255)
.-||.+|.|-+. .++|+++|++|++...
T Consensus 5 V~IIMGS~SD~~~mk~Aa~~L~~fgi~ye~~Vv 37 (162)
T COG0041 5 VGIIMGSKSDWDTMKKAAEILEEFGVPYEVRVV 37 (162)
T ss_pred EEEEecCcchHHHHHHHHHHHHHcCCCeEEEEE
Confidence 459999999886 5899999999987644
No 47
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed
Probab=38.94 E-value=53 Score=30.72 Aligned_cols=37 Identities=22% Similarity=0.468 Sum_probs=29.4
Q ss_pred CHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHH
Q 025297 40 SMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAI 78 (255)
Q Consensus 40 SprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~l 78 (255)
=..|.++|+.+|+++.++ .+|+|+ +.+.+|++++..+
T Consensus 72 ~eeR~~~l~~~gVD~~~~-~~F~~~-~~~ls~e~Fi~~~ 108 (305)
T PRK05627 72 LRDKAELLAELGVDYVLV-LPFDEE-FAKLSAEEFIEDL 108 (305)
T ss_pred HHHHHHHHHHcCCCEEEE-ecCCHH-HhcCCHHHHHHHH
Confidence 377999999999887766 668875 6668899998763
No 48
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=38.18 E-value=2e+02 Score=26.42 Aligned_cols=40 Identities=15% Similarity=0.301 Sum_probs=31.5
Q ss_pred CceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEE
Q 025297 129 PTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVS 171 (255)
Q Consensus 129 ~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T 171 (255)
+.+++|||+|. .||-++.|-.+.. ..++.+..|.+..|.+
T Consensus 153 d~VlvGAd~V~-~nG~v~nkvGT~~--~Al~A~~~~vPv~V~~ 192 (253)
T PRK06372 153 DAVIVGSDSVL-YDGGLIHKNGTFP--LALCARYLKKPFYSLT 192 (253)
T ss_pred CEEEECccEEe-cCCCEeehhhHHH--HHHHHHHcCCCEEEEe
Confidence 47999999965 7888999999887 4467777788777743
No 49
>PF01379 Porphobil_deam: Porphobilinogen deaminase, dipyromethane cofactor binding domain; InterPro: IPR022417 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. Porphobilinogen deaminase (also known as hydroxymethylbilane synthase, 2.5.1.61 from EC) functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses the polymerisation of four PBG molecules into the tetrapyrrole structure, preuroporphyrinogen, with the concomitant release of four molecules of ammonia. This enzyme uses a unique dipyrro-methane cofactor made from two molecules of PBG, which is covalently attached to a cysteine side chain. The tetrapyrrole product is synthesized in an ordered, sequential fashion, by initial attachment of the first pyrrole unit (ring A) to the cofactor, followed by subsequent additions of the remaining pyrrole units (rings B, C, D) to the growing pyrrole chain []. The link between the pyrrole ring and the cofactor is broken once all the pyrroles have been added. This enzyme is folded into three distinct domains that enclose a single, large active site that makes use of an aspartic acid as its one essential catalytic residue, acting as a general acid/base during catalysis [, ]. A deficiency of hydroxymethylbilane synthase is implicated in the neuropathic disease, Acute Intermittent Porphyria (AIP) []. This entry represents the N-terminal domains 1 and 2 of porphobilinogen deaminase, an enzyme involved in tetrapyrrole biosynthesis. The structure of this domain consists of a duplication of two similar intertwined domains with three layers of (a/b/a) each. Porphobilinogen deaminase has a three-domain structure. Domains 1 (N-terminal) and 2 are duplications with the same structure, resembling the transferrins and periplasmic binding proteins. The dipyrromethane cofactor is covalently linked to domain 3 (C-terminal), but is bound by extensive salt-bridges and hydrogen-bonds within the cleft between domains 1 and 2, at a position corresponding to the binding sites for small-molecule ligands in the analogous proteins []. The enzyme has a single catalytic site, and the flexibility between domains is thought to aid elongation of the polypyrrole product in the active-site cleft of the enzyme.; GO: 0033014 tetrapyrrole biosynthetic process; PDB: 1GTK_A 1AH5_A 2YPN_A 1PDA_A 1YPN_A 3EQ1_B 3ECR_A.
Probab=34.95 E-value=32 Score=30.82 Aligned_cols=26 Identities=27% Similarity=0.423 Sum_probs=16.9
Q ss_pred eEEEccCCHHHHHHHHhcCCceEEEc
Q 025297 33 KIILGSSSMPRRKILAEMGYEFSVMA 58 (255)
Q Consensus 33 ~iILASsSprR~~lL~~lgi~f~v~~ 58 (255)
.-+.+++|+||+..|+.+.-++++.+
T Consensus 120 ga~IGTsS~RR~aql~~~~pdl~~~~ 145 (215)
T PF01379_consen 120 GARIGTSSLRRRAQLKRLRPDLEVVP 145 (215)
T ss_dssp T-EEE---HHHHHHHHHH-TTSEEE-
T ss_pred ccccCCCCHHHHHHHHHhccCCeEEE
Confidence 36789999999999999887776664
No 50
>PF05125 Phage_cap_P2: Phage major capsid protein, P2 family ; InterPro: IPR006441 This entry is represented by Bacteriophage P2, GpN. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family represents the major capsid protein component of the heads (capsids) of bacteriophage P2 and related phage including prophage. These sequences represent one of several analogous families lacking detectable sequence similarity. The gene encoding this component is typically located in an operon encoding the small and large terminase subunits, the portal protein and the prohead or maturation protease. ; GO: 0019028 viral capsid
Probab=33.93 E-value=1.6e+02 Score=28.24 Aligned_cols=98 Identities=14% Similarity=0.134 Sum_probs=54.8
Q ss_pred ceEEecceEEEeCCEEecC--CCCHHHHHHHH---HHhcCCcEEEE-----EEEEEEecCCCcEEEEEEEEEEEEcCCCH
Q 025297 130 TILITGDQVVVYEGVIREK--PSSREEARRFI---KDYSGGQCATV-----SSVLVTNLKTGFRKGEWDRVEIQFHEIPD 199 (255)
Q Consensus 130 ~iVI~aDTVV~~dg~Il~K--P~d~eeA~~~L---~~lSG~~h~v~-----T~v~l~~~~~g~~~~~~~~T~V~F~~l~d 199 (255)
.+|+|.|-+...--.++.+ |.++..|.+++ +++-|.+.... .++.|...++-.+...-..-+=+..+-|+
T Consensus 224 VvivGrdLladk~~~l~n~~~~ptE~~A~~~i~~~k~iGGlpa~~vPfFP~~~~lIT~l~NLSIY~Q~gs~RR~~~d~p~ 303 (333)
T PF05125_consen 224 VVIVGRDLLADKYFPLINAANKPTEKLAAQLIISQKRIGGLPAVTVPFFPANALLITSLDNLSIYWQEGSRRRKIKDNPK 303 (333)
T ss_pred EEEEChhHHhhhhhhhhccCCCchHHHHHHHHHHHhhhcCCceeecCCCCCCeEEEEecCceeEEEEcCcEEeecccCch
Confidence 4556666665544455655 45566677764 56777765432 34444444432222112222222333333
Q ss_pred -HHHHHHHHcCCCcccceeeeeccCCcccceeeee
Q 025297 200 -EVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVV 233 (255)
Q Consensus 200 -~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~Ie 233 (255)
+.|+.|-...| ||.||+-...++||.|+
T Consensus 304 r~rie~y~s~Ne------~YvVEd~~~~a~iE~i~ 332 (333)
T PF05125_consen 304 RDRIENYESRNE------AYVVEDYGKAALIENIE 332 (333)
T ss_pred hhhhhhhhhccc------cEEecccceEEEEeecc
Confidence 56777776665 79999977777888774
No 51
>COG0181 HemC Porphobilinogen deaminase [Coenzyme metabolism]
Probab=33.89 E-value=30 Score=32.69 Aligned_cols=48 Identities=23% Similarity=0.455 Sum_probs=31.3
Q ss_pred EEEccCCHHHHHHHHhcCCceEEE--cCCCCCCCCCCC---CHHHHHHHHHHHH
Q 025297 34 IILGSSSMPRRKILAEMGYEFSVM--AADIDEKSIRKE---KPEDLVMAIAEAK 82 (255)
Q Consensus 34 iILASsSprR~~lL~~lgi~f~v~--~s~iDE~~~~~~---~p~~~v~~lA~~K 82 (255)
-+++++|.||+..|+.+..++++. .-++|-+ +++. .-...++.-|-.|
T Consensus 121 a~VGTSSlRR~aql~~~rPdl~i~~lRGNVdTR-L~KL~~g~yDAIILA~AGL~ 173 (307)
T COG0181 121 AVVGTSSLRRQAQLKALRPDLKIEPLRGNVDTR-LRKLDEGEYDAIILAAAGLK 173 (307)
T ss_pred CccccchHHHHHHHHHhCCCCeEEeccCcHHHH-HHHhhcCCccHHHHHHHHHH
Confidence 467999999999999987766555 4567764 3332 2334455444444
No 52
>PRK07143 hypothetical protein; Provisional
Probab=32.82 E-value=79 Score=29.27 Aligned_cols=38 Identities=18% Similarity=0.417 Sum_probs=28.9
Q ss_pred CCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHH
Q 025297 39 SSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAI 78 (255)
Q Consensus 39 sSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~l 78 (255)
+-..|.++|+++|++..++ .+||++ +.+.+|++++..+
T Consensus 66 ~~~er~~~l~~~Gvd~~~~-~~F~~~-~a~ls~e~Fi~~l 103 (279)
T PRK07143 66 DLNSRLQTLANLGFKNIIL-LDFNEE-LQNLSGNDFIEKL 103 (279)
T ss_pred CHHHHHHHHHHCCCCEEEE-eCCCHH-HhCCCHHHHHHHH
Confidence 3357999999999976444 457765 6678899998875
No 53
>cd00494 HMBS Hydroxymethylbilane synthase (HMBS), also known as porphobilinogen deaminase (PBGD), is an intermediate enzyme in the biosynthetic pathway of tetrapyrrolic ring systems, such as heme, chlorophylls, and vitamin B12. HMBS catalyzes the conversion of porphobilinogen (PBG) into hydroxymethylbilane (HMB). HMBS consists of three domains, and is believed to bind substrate through a hinge-bending motion of domains I and II. HMBS is found in all organisms except viruses.
Probab=32.38 E-value=42 Score=31.47 Aligned_cols=30 Identities=20% Similarity=0.423 Sum_probs=23.6
Q ss_pred EEccCCHHHHHHHHhcCCceEEEc--CCCCCC
Q 025297 35 ILGSSSMPRRKILAEMGYEFSVMA--ADIDEK 64 (255)
Q Consensus 35 ILASsSprR~~lL~~lgi~f~v~~--s~iDE~ 64 (255)
+.+++|+||+..|+.+..++++++ -++|.+
T Consensus 119 ~IGTsS~RR~aql~~~rpdl~~~~iRGNV~TR 150 (292)
T cd00494 119 VVGTSSLRRQAQLKRKRPDLKFEPLRGNVDTR 150 (292)
T ss_pred EEecCCHHHHHHHHHHCCCCEEEEcCCCHHHH
Confidence 779999999999999877666664 456654
No 54
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism]
Probab=31.99 E-value=22 Score=35.65 Aligned_cols=46 Identities=26% Similarity=0.281 Sum_probs=36.5
Q ss_pred HHHHHHHHHc-CCCcccceeeeeccCCcccceeeeecccCCcccCCHH
Q 025297 199 DEVIEKLIEE-GIVLNVAGGLIIEHSLILPYVKQVVGAMDSVMGLPKA 245 (255)
Q Consensus 199 d~~I~~Yi~t-ge~~dkAGgy~Iqg~~g~~~I~~IeG~~~nV~GLPl~ 245 (255)
+++|..|+.. +..++-||||.+=| .--.=...|||....+=|||+-
T Consensus 315 d~~i~~~~~~~~~viGICGG~QmLG-~~i~Dp~g~Eg~~~~~~GLgLl 361 (486)
T COG1492 315 DEKILEYARKGGDVIGICGGYQMLG-RRLKDPSGIEGAKGEAEGLGLL 361 (486)
T ss_pred HHHHHHHHhCCCCEEEEcchHHhhh-hhhcCcccccCcccccCCccce
Confidence 4578899995 58899999999988 3344456899998888899974
No 55
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=31.98 E-value=76 Score=28.65 Aligned_cols=57 Identities=12% Similarity=0.189 Sum_probs=40.1
Q ss_pred EEecCCCCHHHHHHHHHHhcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEEcCCCHHHHHHHHHcC
Q 025297 144 VIREKPSSREEARRFIKDYSGGQCATVSSVLVTNLKTGFRKGEWDRVEIQFHEIPDEVIEKLIEEG 209 (255)
Q Consensus 144 ~Il~KP~d~eeA~~~L~~lSG~~h~v~T~v~l~~~~~g~~~~~~~~T~V~F~~l~d~~I~~Yi~tg 209 (255)
-++-=|...++|.+.|.++..+...+++--+... +..--=.|+.++++|+.+||..-
T Consensus 155 IviAVPV~p~~a~~~l~s~~D~vvc~~~P~~F~A---------Vg~~Y~dF~q~sdeEV~~lL~~a 211 (220)
T COG1926 155 IVIAVPVAPEDAAAELESEADEVVCLYMPAPFEA---------VGEFYRDFRQVSDEEVRALLRRA 211 (220)
T ss_pred EEEEcccCCHHHHHHHHhhcCeEEEEcCCccHHH---------HHHHHHHHhhcCHHHHHHHHHhc
Confidence 4667799999999999999887655554333221 11112357889999999999853
No 56
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.
Probab=31.54 E-value=2.6e+02 Score=22.06 Aligned_cols=49 Identities=27% Similarity=0.387 Sum_probs=30.4
Q ss_pred EEEccCCHHHHHHH---HhcCCceEEEcC-CCCCCC---C-------------CCCCHHHHHHHHHHHH
Q 025297 34 IILGSSSMPRRKIL---AEMGYEFSVMAA-DIDEKS---I-------------RKEKPEDLVMAIAEAK 82 (255)
Q Consensus 34 iILASsSprR~~lL---~~lgi~f~v~~s-~iDE~~---~-------------~~~~p~~~v~~lA~~K 82 (255)
|=|..+..||..+. ..+|++|+.++. |-.+.. . +..+|-++...++..+
T Consensus 5 InL~~~~~Rr~~~~~~~~~~~~~~~~~~Avd~~~~~~~~~~~~~~~~~~~~~~~~l~~gEiGC~lSH~~ 73 (128)
T cd06532 5 INLDRSTDRRERMEAQLAALGLDFEFFDAVDGKDLSEEELAALYDALFLPRYGRPLTPGEIGCFLSHYK 73 (128)
T ss_pred EECCCCHHHHHHHHHHHHHcCCCeEEEeccccccCCHHHHHHHhHHHhhhhcCCCCChhhHHHHHHHHH
Confidence 45777777777774 457999987743 222111 0 1245677777777777
No 57
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
Probab=31.06 E-value=47 Score=27.92 Aligned_cols=40 Identities=20% Similarity=0.433 Sum_probs=27.6
Q ss_pred cCCHHHHHHHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHH
Q 025297 38 SSSMPRRKILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIA 79 (255)
Q Consensus 38 SsSprR~~lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA 79 (255)
++-..|.++|+.+|+++.++. +|+++ +...+|++++..+-
T Consensus 62 ~s~~ek~~~l~~~Gvd~~~~~-~F~~~-~~~ls~~~Fi~~iL 101 (157)
T PF06574_consen 62 TSLEEKLELLESLGVDYVIVI-PFTEE-FANLSPEDFIEKIL 101 (157)
T ss_dssp S-HHHHHHHHHHTTESEEEEE--CCCH-HCCS-HHHHHHHHC
T ss_pred CCHHHHHHHHHHcCCCEEEEe-cchHH-HHcCCHHHHHHHHH
Confidence 456789999999999875543 67775 55678998887643
No 58
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=30.97 E-value=47 Score=24.97 Aligned_cols=22 Identities=36% Similarity=0.596 Sum_probs=19.0
Q ss_pred HHHHhcCCceEEEcCCCCCCCC
Q 025297 45 KILAEMGYEFSVMAADIDEKSI 66 (255)
Q Consensus 45 ~lL~~lgi~f~v~~s~iDE~~~ 66 (255)
++|+..|+.|+-+|+.+|--.+
T Consensus 23 ~I~E~~~is~Eh~PSGID~~Si 44 (76)
T cd04911 23 SILEDNGISYEHMPSGIDDISI 44 (76)
T ss_pred HHHHHcCCCEeeecCCCccEEE
Confidence 6899999999999999997443
No 59
>PHA02538 N capsid protein; Provisional
Probab=30.95 E-value=1.8e+02 Score=28.13 Aligned_cols=98 Identities=18% Similarity=0.139 Sum_probs=52.4
Q ss_pred ceEEecceEEEeCCEEecC--CCCHHHHHHHH---HHhcCCcEEEE-----EEEEEEecCCCcEEEEEEEEEEEEcCCCH
Q 025297 130 TILITGDQVVVYEGVIREK--PSSREEARRFI---KDYSGGQCATV-----SSVLVTNLKTGFRKGEWDRVEIQFHEIPD 199 (255)
Q Consensus 130 ~iVI~aDTVV~~dg~Il~K--P~d~eeA~~~L---~~lSG~~h~v~-----T~v~l~~~~~g~~~~~~~~T~V~F~~l~d 199 (255)
.+|+|+|-+....-.++.| |-++.-|.+++ +++-|...... -++.|...++-.+...-.+.+=+..+-++
T Consensus 229 VvivG~dLla~~~~~l~n~~~~ptE~~Aa~~i~~~k~iGGlpa~~~PffP~~~l~VT~L~NLsIY~Q~gs~RR~~~d~p~ 308 (348)
T PHA02538 229 VVIVGRDLLADKYFPIVNKAQKPTEKIAADLIISQKRIGGLPAVRVPFFPANAMLVTTLENLSIYTQEGSRRRSLKDNPD 308 (348)
T ss_pred EEEEChhhhhhhhhhhhhcCCCcHHHHHHHHHHHHhhcCCCcceecCCCCCCeEEEEeccceeEEEEcCcEEeecccchh
Confidence 4556666655544455544 44566777776 55667765432 34445444432222222222223333333
Q ss_pred -HHHHHHHHcCCCcccceeeeeccCCcccceeeee
Q 025297 200 -EVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVV 233 (255)
Q Consensus 200 -~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~Ie 233 (255)
+.|+.|-...| ||.||+....++|+.|+
T Consensus 309 r~riEny~s~Ne------~YvVEd~~~~a~iE~i~ 337 (348)
T PHA02538 309 KKRIENYESRNE------AYVVEDYGCGCLVENIK 337 (348)
T ss_pred hhhhhhhhhccc------cEEeccccceEEeecce
Confidence 55666665555 78899866667777663
No 60
>COG4090 Uncharacterized protein conserved in archaea [Function unknown]
Probab=30.36 E-value=97 Score=26.12 Aligned_cols=41 Identities=20% Similarity=0.367 Sum_probs=33.2
Q ss_pred ecceEEEeCCEEecCC-CCHHHHHHHHHHhcCCcEEEEEEEEEEe
Q 025297 134 TGDQVVVYEGVIREKP-SSREEARRFIKDYSGGQCATVSSVLVTN 177 (255)
Q Consensus 134 ~aDTVV~~dg~Il~KP-~d~eeA~~~L~~lSG~~h~v~T~v~l~~ 177 (255)
.+|+||.++|--.-|= .+.++|++++..++++. +-|||..+
T Consensus 85 ~aDvvVLlGGLaMP~~gv~~d~~kel~ee~~~kk---liGvCfm~ 126 (154)
T COG4090 85 SADVVVLLGGLAMPKIGVTPDDAKELLEELGNKK---LIGVCFMN 126 (154)
T ss_pred cccEEEEEcccccCcCCCCHHHHHHHHHhcCCCc---eEEeeHHH
Confidence 5899999999766553 68899999999999993 34888854
No 61
>PRK00072 hemC porphobilinogen deaminase; Reviewed
Probab=29.66 E-value=50 Score=31.03 Aligned_cols=31 Identities=19% Similarity=0.473 Sum_probs=25.0
Q ss_pred EEEccCCHHHHHHHHhcCCceEEEc--CCCCCC
Q 025297 34 IILGSSSMPRRKILAEMGYEFSVMA--ADIDEK 64 (255)
Q Consensus 34 iILASsSprR~~lL~~lgi~f~v~~--s~iDE~ 64 (255)
-+.+++|+||+..|+.+..++++.+ -++|.+
T Consensus 122 a~IGTsS~RR~aql~~~~Pdl~~~~iRGNV~TR 154 (295)
T PRK00072 122 AVVGTSSLRRQAQLLALRPDLEIKPLRGNVDTR 154 (295)
T ss_pred CEEecCcHHHHHHHHHHCcCCEEEECccCHHHH
Confidence 4679999999999999988777775 456654
No 62
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=28.41 E-value=1.2e+02 Score=25.97 Aligned_cols=54 Identities=20% Similarity=0.284 Sum_probs=39.2
Q ss_pred cCCCCCCCCChHHHHhhhcccccCCCCCeEEEccCC--------HHHHHHHHh-cCCceEEEc
Q 025297 5 SLTRPDSPVSPSEFRQSLGNMEASATPVKIILGSSS--------MPRRKILAE-MGYEFSVMA 58 (255)
Q Consensus 5 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iILASsS--------prR~~lL~~-lgi~f~v~~ 58 (255)
.||.|.+.-=|.++.+.+-..-..-...+|++-|.| ..|.+.+++ +|+++....
T Consensus 51 TL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl~h~ 113 (168)
T PF09419_consen 51 TLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVLRHR 113 (168)
T ss_pred CCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEEEeC
Confidence 478888887778887777665543333369999998 688888876 999865553
No 63
>TIGR01551 major_capsid_P2 phage major capsid protein, P2 family. This model family represents the major capsid protein component of the heads (capsids) of bacteriophage P2 and related phage. This model represents one of several analogous families lacking detectable sequence similarity. The gene encoding this component is typically located in an operon encoding the small and large terminase subunits, the portal protein and the prohead or maturation protease.
Probab=27.99 E-value=2.2e+02 Score=27.28 Aligned_cols=98 Identities=17% Similarity=0.144 Sum_probs=53.1
Q ss_pred ceEEecceEEEeCCEEecC--CCCHHHHHHHHH---HhcCCcEEEE-----EEEEEEecCCCcEEEEEEEEEEEEcCCCH
Q 025297 130 TILITGDQVVVYEGVIREK--PSSREEARRFIK---DYSGGQCATV-----SSVLVTNLKTGFRKGEWDRVEIQFHEIPD 199 (255)
Q Consensus 130 ~iVI~aDTVV~~dg~Il~K--P~d~eeA~~~L~---~lSG~~h~v~-----T~v~l~~~~~g~~~~~~~~T~V~F~~l~d 199 (255)
.+|+|+|-+....-.++.| |-++.-|.+++. ++-|...... .++.|...++-.+...-.+.+=+..+-++
T Consensus 218 VvivG~dLla~~~~~l~n~~~~ptE~~Aa~~~~~~k~igGl~a~~~PffP~~~l~VT~L~NLsIY~Q~gs~RR~~~~~~~ 297 (327)
T TIGR01551 218 VVLVGADLVSKETKLIQQKHLTPSEKIALGSHNLMGSFGGMNAITPPNLPDRAAAVTTLKNLSVYTQAGSVRRSLRNDED 297 (327)
T ss_pred EEEEChhhhhhhhhhhhhcCCCcHHHHHHHHHHHHHhhCCCcceecCCCCCCeEEEEeccceeEEEEcCcEEeecccchh
Confidence 4455666655544444433 445666777765 7778865442 44555544432222222222223333333
Q ss_pred -HHHHHHHHcCCCcccceeeeeccCCcccceeeee
Q 025297 200 -EVIEKLIEEGIVLNVAGGLIIEHSLILPYVKQVV 233 (255)
Q Consensus 200 -~~I~~Yi~tge~~dkAGgy~Iqg~~g~~~I~~Ie 233 (255)
+.|+.|-...| ||.||+....++|+.|+
T Consensus 298 r~riEn~~s~Ne------~YvVEd~~~~a~ie~i~ 326 (327)
T TIGR01551 298 RKRLVTSYYRQE------GYVVEDLGLMTAIDHTK 326 (327)
T ss_pred hhhhhhhhhccc------ceEEccCcceEEeeccc
Confidence 55777666555 79999976667777653
No 64
>PF09897 DUF2124: Uncharacterized protein conserved in archaea (DUF2124); InterPro: IPR009183 There are currently no experimental data for members of this group of archaeal proteins, nor do they exhibit features indicative of any function.; PDB: 2R47_D.
Probab=27.84 E-value=53 Score=27.86 Aligned_cols=39 Identities=23% Similarity=0.307 Sum_probs=32.2
Q ss_pred cceEEEeCCEEecC-CCCHHHHHHHHHHhcCCcEEEEEEEEEE
Q 025297 135 GDQVVVYEGVIREK-PSSREEARRFIKDYSGGQCATVSSVLVT 176 (255)
Q Consensus 135 aDTVV~~dg~Il~K-P~d~eeA~~~L~~lSG~~h~v~T~v~l~ 176 (255)
+|.||.++|--.-| +.+.|++.+++.+++.+. +-|||..
T Consensus 81 ~D~vVlmGGLAMP~~~v~~e~v~~li~ki~~~~---iiGiCFm 120 (147)
T PF09897_consen 81 PDVVVLMGGLAMPKSGVTPEDVNELIKKISPKK---IIGICFM 120 (147)
T ss_dssp EEEEEEEGGGGSTTTS--HHHHHHHHHHHEEEE---EEEEEET
T ss_pred CCEEEEEcccccCCCCCCHHHHHHHHHHhCcCC---EEEEehH
Confidence 89999999976655 779999999999999888 6689985
No 65
>PRK05772 translation initiation factor IF-2B subunit alpha; Provisional
Probab=27.32 E-value=3.7e+02 Score=26.02 Aligned_cols=93 Identities=14% Similarity=0.177 Sum_probs=54.9
Q ss_pred HHHhcCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHHHHHHhhCCCCCCcc
Q 025297 46 ILAEMGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTAEAILNRLPIGDYIK 125 (255)
Q Consensus 46 lL~~lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~~~~~~~~~~ 125 (255)
.+...|..|.|+ ++|.........-.+.+|++.. =+..++.+..+-.+.++-.
T Consensus 194 ~a~~~gk~f~V~---v~EsRP~~qG~rlta~eL~~~G------------------IpvtlI~Dsa~~~~m~~~~------ 246 (363)
T PRK05772 194 LAKALGMSVSVI---APETRPWLQGSRLTVYELMEEG------------------IKVTLITDTAVGLVMYKDM------ 246 (363)
T ss_pred HHHHCCCeEEEE---ECCCCccchhHHHHHHHHHHCC------------------CCEEEEehhHHHHHHhhcC------
Confidence 344578899998 6675432222222233444333 1122234444544544311
Q ss_pred CCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEE
Q 025297 126 EAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATV 170 (255)
Q Consensus 126 ~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~ 170 (255)
=+.+|+|||.|+ .||-++.|-.+.. ..++.+..|.+-.|.
T Consensus 247 --Vd~VivGAD~I~-~NG~v~NKiGTy~--lA~~Ak~~~vPfyV~ 286 (363)
T PRK05772 247 --VNNVMVGADRIL-RDGHVFNKIGTFK--EAVIAHELGIPFYAL 286 (363)
T ss_pred --CCEEEECccEEe-cCCCEeehhhhHH--HHHHHHHhCCCEEEE
Confidence 257999999975 6777999999887 557778888876554
No 66
>PRK13843 conjugal transfer protein TraH; Provisional
Probab=26.18 E-value=1.2e+02 Score=27.15 Aligned_cols=26 Identities=31% Similarity=0.538 Sum_probs=22.4
Q ss_pred eCCE--EecCCCCHHHHHHHHHHhcCCc
Q 025297 141 YEGV--IREKPSSREEARRFIKDYSGGQ 166 (255)
Q Consensus 141 ~dg~--Il~KP~d~eeA~~~L~~lSG~~ 166 (255)
.+|. +..||++.+||...++.|-|+-
T Consensus 39 ~ggr~~L~~~P~s~~EA~~~vr~l~~~g 66 (207)
T PRK13843 39 SGGRLVLVPKPKTPDEAMALIRQYVGQA 66 (207)
T ss_pred eCCeeeecCCCCCHHHHHHHHHHHHhcC
Confidence 3565 4699999999999999999886
No 67
>TIGR00212 hemC porphobilinogen deaminase. Biosynthesis of cofactors, prosthetic groups, and carriers: Heme and porphyrin
Probab=26.08 E-value=63 Score=30.30 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=24.0
Q ss_pred EEEccCCHHHHHHHHhcCCceEEEc--CCCCCC
Q 025297 34 IILGSSSMPRRKILAEMGYEFSVMA--ADIDEK 64 (255)
Q Consensus 34 iILASsSprR~~lL~~lgi~f~v~~--s~iDE~ 64 (255)
-+.+++|+||+..|+.+-.++++++ -++|.+
T Consensus 118 a~VGTsS~RR~aql~~~rPdl~i~~iRGNV~TR 150 (292)
T TIGR00212 118 AKVGTSSLRRKAQLKAIRPDLKIEPLRGNIDTR 150 (292)
T ss_pred CEeccCCHHHHHHHHHHCCCCEEEECcCCHHHH
Confidence 4779999999999999887776664 355543
No 68
>PF10288 DUF2392: Protein of unknown function (DUF2392); InterPro: IPR019407 Cytoplasmic thiouridylase is a highly conserved complex responsible for the 2-thiolation of cytosolic tRNAs []. Inactivation of this complex leads to a loss of thiolation on tRNAs, decreased viability and aberrant cell development. This entry represents the second subunit of this complex.
Probab=25.87 E-value=13 Score=29.26 Aligned_cols=46 Identities=9% Similarity=0.083 Sum_probs=35.5
Q ss_pred EcCCCHHHHHHHHHcCCCc--------------ccceeeeeccCCcccceeeeecccCCcc
Q 025297 194 FHEIPDEVIEKLIEEGIVL--------------NVAGGLIIEHSLILPYVKQVVGAMDSVM 240 (255)
Q Consensus 194 F~~l~d~~I~~Yi~tge~~--------------dkAGgy~Iqg~~g~~~I~~IeG~~~nV~ 240 (255)
+|++...||..|......- ....--.|+. +...||..++.+|.+++
T Consensus 38 LRd~l~kEi~~Y~~~~~l~~~~~~~~~~~~~~~~~~~~~SI~~-L~~~fi~~Le~~ypstv 97 (107)
T PF10288_consen 38 LRDLLKKEIAFYNRLCGLESVLVPSLDTDSSQSKSSKNMSINE-LTEDFIDNLEENYPSTV 97 (107)
T ss_pred hHhCCHHHHHHHHHHhCcchhhcccccccccccccCcCCCHHH-HHHHHHHHHhCcCcchH
Confidence 3789999999999843211 2355677899 89999999999997765
No 69
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=25.87 E-value=1.6e+02 Score=24.55 Aligned_cols=42 Identities=14% Similarity=0.093 Sum_probs=27.0
Q ss_pred CCCeEEEccCCHHH--------------HHHHHhcCCce-EEEcCCCCCCCCCCCCHHH
Q 025297 30 TPVKIILGSSSMPR--------------RKILAEMGYEF-SVMAADIDEKSIRKEKPED 73 (255)
Q Consensus 30 ~~~~iILASsSprR--------------~~lL~~lgi~f-~v~~s~iDE~~~~~~~p~~ 73 (255)
..+++.++|+.+.. ..+|+.+|+.+ .++.++ +...++.+|.-
T Consensus 57 ~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~--~~~~~KP~p~~ 113 (166)
T TIGR01664 57 EGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATH--AGLYRKPMTGM 113 (166)
T ss_pred CCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEEEEEecC--CCCCCCCccHH
Confidence 46789999998763 57899999976 343343 22234444543
No 70
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=25.32 E-value=52 Score=25.04 Aligned_cols=17 Identities=29% Similarity=0.571 Sum_probs=14.3
Q ss_pred HHHHHHHHHHhcCCcEE
Q 025297 152 REEARRFIKDYSGGQCA 168 (255)
Q Consensus 152 ~eeA~~~L~~lSG~~h~ 168 (255)
++.|.++.+++||.+|-
T Consensus 21 rdAAlQfVRKlSGtT~P 37 (88)
T COG5552 21 RDAALQFVRKLSGTTHP 37 (88)
T ss_pred HHHHHHHHHHhcCCCCc
Confidence 35688999999999885
No 71
>PRK01066 porphobilinogen deaminase; Provisional
Probab=25.27 E-value=64 Score=29.32 Aligned_cols=31 Identities=26% Similarity=0.320 Sum_probs=23.7
Q ss_pred EEEccCCHHHHHHHHhcCCceEEEc--CCCCCC
Q 025297 34 IILGSSSMPRRKILAEMGYEFSVMA--ADIDEK 64 (255)
Q Consensus 34 iILASsSprR~~lL~~lgi~f~v~~--s~iDE~ 64 (255)
-+.+++|+||+..|..+-.++++++ -++|.+
T Consensus 133 a~IGTSS~RR~aql~~~rPdl~v~~iRGNV~TR 165 (231)
T PRK01066 133 PRIGSSSLRREELLKLLFPSGIILDIRGTIEER 165 (231)
T ss_pred CEEeCChHHHHHHHHHHCCCCEEEeCcCCHHHH
Confidence 4779999999999999877776664 345543
No 72
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=24.20 E-value=5e+02 Score=24.13 Aligned_cols=101 Identities=12% Similarity=0.168 Sum_probs=58.7
Q ss_pred ccCCHHHHHHHHh---cCCceEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccchhhhhccHHHHHH
Q 025297 37 GSSSMPRRKILAE---MGYEFSVMAADIDEKSIRKEKPEDLVMAIAEAKAAAIISKLQITDSQLGNVKQTILIVADTAEA 113 (255)
Q Consensus 37 ASsSprR~~lL~~---lgi~f~v~~s~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~~~~~~~~~~a~~ 113 (255)
=|.|..=..+|.. .|-+|+|+ +.|...... -..++..|++.. =+.....+..+-.
T Consensus 122 ~~~S~tv~~~l~~a~~~~~~f~V~---v~EsrP~~~-G~~~a~~L~~~g------------------I~vtlI~Dsa~~~ 179 (301)
T TIGR00511 122 HCNSEAALSVIKTAFEQGKDIEVI---ATETRPRKQ-GHITAKELRDYG------------------IPVTLIVDSAVRY 179 (301)
T ss_pred ECCcHHHHHHHHHHHHcCCcEEEE---EecCCCcch-HHHHHHHHHHCC------------------CCEEEEehhHHHH
Confidence 4444333334443 57889988 455543222 244555555433 1122234444445
Q ss_pred HHhhCCCCCCccCCCCceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEEE
Q 025297 114 ILNRLPIGDYIKEAEPTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVSS 172 (255)
Q Consensus 114 v~~~~~~~~~~~~~~~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T~ 172 (255)
+.++. +.+++|||.|+ .||-++.|-.+.. ..++.+..+.+..|.+.
T Consensus 180 ~m~~v----------d~VivGad~v~-~nG~v~nkiGT~~--lA~~Ak~~~vPv~V~a~ 225 (301)
T TIGR00511 180 FMKEV----------DHVVVGADAIT-ANGALINKIGTSQ--LALAAREARVPFMVAAE 225 (301)
T ss_pred HHHhC----------CEEEECccEEe-cCCCEEEHHhHHH--HHHHHHHhCCCEEEEcc
Confidence 55542 47999999966 6788889999887 44566667777666543
No 73
>PLN02691 porphobilinogen deaminase
Probab=23.46 E-value=75 Score=30.64 Aligned_cols=31 Identities=13% Similarity=0.333 Sum_probs=24.0
Q ss_pred EEEccCCHHHHHHHHhcCCceEEEc--CCCCCC
Q 025297 34 IILGSSSMPRRKILAEMGYEFSVMA--ADIDEK 64 (255)
Q Consensus 34 iILASsSprR~~lL~~lgi~f~v~~--s~iDE~ 64 (255)
-+++++|+||+..|+.+-.++++.+ -++|.+
T Consensus 165 a~IGTSS~RR~aql~~~rPdl~v~~iRGNVdTR 197 (351)
T PLN02691 165 SVVGTASLRRQSQILHKYPHLKVVNFRGNVQTR 197 (351)
T ss_pred CEeccCcHHHHHHHHHHCCCCEEEeccCCHHHH
Confidence 4789999999999999877666664 455554
No 74
>PF05729 NACHT: NACHT domain
Probab=23.02 E-value=71 Score=25.14 Aligned_cols=19 Identities=11% Similarity=0.319 Sum_probs=16.9
Q ss_pred EEEEEcCCCHHHHHHHHHc
Q 025297 190 VEIQFHEIPDEVIEKLIEE 208 (255)
Q Consensus 190 T~V~F~~l~d~~I~~Yi~t 208 (255)
..+....|++++++.|++.
T Consensus 143 ~~~~l~~~~~~~~~~~~~~ 161 (166)
T PF05729_consen 143 QILELEPFSEEDIKQYLRK 161 (166)
T ss_pred cEEEECCCCHHHHHHHHHH
Confidence 5788899999999999975
No 75
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=22.30 E-value=3e+02 Score=22.96 Aligned_cols=24 Identities=21% Similarity=0.330 Sum_probs=19.5
Q ss_pred CCCeEEEccCCHHH--HHHHHhcCCc
Q 025297 30 TPVKIILGSSSMPR--RKILAEMGYE 53 (255)
Q Consensus 30 ~~~~iILASsSprR--~~lL~~lgi~ 53 (255)
..+++.++|++++. ..+|+.+|+.
T Consensus 121 ~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 121 APKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred cCCcEEEECCCCHHHHHHHHHHcCch
Confidence 35789999999887 6778999984
No 76
>smart00417 H4 Histone H4.
Probab=22.30 E-value=62 Score=24.24 Aligned_cols=17 Identities=24% Similarity=0.581 Sum_probs=15.0
Q ss_pred CCcccCCHHHHHHHHHH
Q 025297 237 DSVMGLPKAVTEKLIKE 253 (255)
Q Consensus 237 ~nV~GLPl~~l~~lL~~ 253 (255)
+|+.|+|.+.+.++++.
T Consensus 9 d~i~gI~k~~IrRLaRr 25 (74)
T smart00417 9 DNIQGITKPAIRRLARR 25 (74)
T ss_pred hhhcCCCHHHHHHHHHH
Confidence 68999999999998865
No 77
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=21.85 E-value=4.3e+02 Score=24.64 Aligned_cols=40 Identities=8% Similarity=0.114 Sum_probs=31.0
Q ss_pred CceEEecceEEEeCCEEecCCCCHHHHHHHHHHhcCCcEEEEE
Q 025297 129 PTILITGDQVVVYEGVIREKPSSREEARRFIKDYSGGQCATVS 171 (255)
Q Consensus 129 ~~iVI~aDTVV~~dg~Il~KP~d~eeA~~~L~~lSG~~h~v~T 171 (255)
+.+++|||.|. -||-++.|-.+.. ..++.+..|.+..|.+
T Consensus 199 d~VlvGAd~v~-~nG~v~nk~GT~~--lA~~Ak~~~vPv~V~a 238 (303)
T TIGR00524 199 DAVIVGADRIA-RNGDVANKIGTYQ--LAVLAKEFRIPFFVAA 238 (303)
T ss_pred CEEEEcccEEe-cCCCEeEhhhHHH--HHHHHHHhCCCEEEec
Confidence 57999999975 7888899999887 4566777777766644
Done!