BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025301
MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL
LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR
GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA
VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT
KNWQIPVYTMEDQEC

High Scoring Gene Products

Symbol, full name Information P value
AT3G56750 protein from Arabidopsis thaliana 2.2e-98
AT2G41150 protein from Arabidopsis thaliana 2.0e-95
AT4G12700 protein from Arabidopsis thaliana 2.3e-10
AT2G04280 protein from Arabidopsis thaliana 7.6e-09
SUB1
AT4G08810
protein from Arabidopsis thaliana 1.5e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025301
        (255 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2103640 - symbol:AT3G56750 "AT3G56750" species...   977  2.2e-98   1
TAIR|locus:2063192 - symbol:AT2G41150 species:3702 "Arabi...   949  2.0e-95   1
TAIR|locus:2135773 - symbol:AT4G12700 "AT4G12700" species...   169  2.3e-10   1
TAIR|locus:2059767 - symbol:AT2G04280 "AT2G04280" species...   157  7.6e-09   1
TAIR|locus:2138228 - symbol:SUB1 "AT4G08810" species:3702...   146  1.5e-07   1


>TAIR|locus:2103640 [details] [associations]
            symbol:AT3G56750 "AT3G56750" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0009616 "virus induced gene silencing"
            evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA]
            [GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
            network" evidence=IDA] [GO:0016757 "transferase activity,
            transferring glycosyl groups" evidence=ISM] GO:GO:0005794
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005768 GO:GO:0005802
            EMBL:AL390921 EMBL:AY059818 EMBL:AY094482 EMBL:BT000051
            IPI:IPI00522885 PIR:T51263 RefSeq:NP_191234.1 UniGene:At.26610
            UniGene:At.48777 ProteinModelPortal:Q9LET2 PaxDb:Q9LET2
            PRIDE:Q9LET2 EnsemblPlants:AT3G56750.1 GeneID:824842
            KEGG:ath:AT3G56750 TAIR:At3g56750 eggNOG:NOG289691
            HOGENOM:HOG000006082 InParanoid:Q9LET2 OMA:TRPEFIL PhylomeDB:Q9LET2
            ProtClustDB:CLSN2684208 ArrayExpress:Q9LET2 Genevestigator:Q9LET2
            Uniprot:Q9LET2
        Length = 403

 Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
 Identities = 184/253 (72%), Positives = 222/253 (87%)

Query:     1 MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
             MDSLYD++LISE +PVILD+SK W+ VL TSMKLG RG+AHV GV+R  L ++  YSNLL
Sbjct:   148 MDSLYDIDLISEKIPVILDDSKTWHIVLSTSMKLGERGIAHVSGVTRHRLKESH-YSNLL 206

Query:    61 LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
             +INRTASPL+WF+ECKDR N SA+MLP+SFLP+MAA KLR+AA+KIKA L DYD+IHVRR
Sbjct:   207 IINRTASPLAWFVECKDRSNRSAVMLPYSFLPNMAAAKLRNAAEKIKAQLGDYDAIHVRR 266

Query:   121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
             GD+LKTRKDR+GV+R  FPHLDRDTRPE IL RI+  +P GRTLFI SNER PGFFSPLA
Sbjct:   267 GDKLKTRKDRFGVERIQFPHLDRDTRPEFILRRIEKRIPRGRTLFIGSNERKPGFFSPLA 326

Query:   181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
             VRY LAYSSNFS+ILD ++ENNYQLFM+ERL++MGA+T+ KT+KE + DL+LTDDPKKN 
Sbjct:   327 VRYKLAYSSNFSEILDPIIENNYQLFMMERLVMMGAKTYFKTFKEYETDLTLTDDPKKN- 385

Query:   241 KNWQIPVYTMEDQ 253
             KNW+IPVYTM+++
Sbjct:   386 KNWEIPVYTMDER 398


>TAIR|locus:2063192 [details] [associations]
            symbol:AT2G41150 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005768 "endosome"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0005802 "trans-Golgi network" evidence=IDA] [GO:0016757
            "transferase activity, transferring glycosyl groups" evidence=ISM]
            GO:GO:0005794 EMBL:CP002685 GO:GO:0005768 GO:GO:0005802
            UniGene:At.11329 IPI:IPI00518086 RefSeq:NP_181648.2
            UniGene:At.27719 UniGene:At.66425 ProteinModelPortal:F4IJX5
            PRIDE:F4IJX5 EnsemblPlants:AT2G41150.2 GeneID:818714
            KEGG:ath:AT2G41150 OMA:SSCAMES Uniprot:F4IJX5
        Length = 404

 Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
 Identities = 178/252 (70%), Positives = 218/252 (86%)

Query:     1 MDSLYDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLL 60
             M+SLYD++LISE +PVILD+S+ W+ +L TSMKL  RG AHV G +R  LND+  ++NLL
Sbjct:   148 MESLYDIDLISEKIPVILDDSETWHIMLSTSMKLKERGSAHVYGANRHELNDSSDFTNLL 207

Query:    61 LINRTASPLSWFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLVDYDSIHVRR 120
             LINRTASPL+WF+ECKDR N S +MLP+SFL +MAA +LRDAA+KIKA L DYD+IHVRR
Sbjct:   208 LINRTASPLAWFVECKDRGNRSDVMLPYSFLQTMAASRLRDAAEKIKAKLGDYDAIHVRR 267

Query:   121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
             GD+LKTRKDR+ V+RS FPHLDRDTRPE I+ RI+  +PPGRTLFI SNERTP FFSPLA
Sbjct:   268 GDKLKTRKDRFRVERSQFPHLDRDTRPEFIIGRIQKQIPPGRTLFIGSNERTPDFFSPLA 327

Query:   181 VRYNLAYSSNFSDILDLVVENNYQLFMVERLILMGARTFIKTYKEDDNDLSLTDDPKKNT 240
             +RY +AYSSNFS+ILD ++ENNYQLFMVERLI+MGA+TF KT++E + DL+LTDDPKKN 
Sbjct:   328 IRYKVAYSSNFSEILDPIIENNYQLFMVERLIMMGAKTFFKTFREYETDLTLTDDPKKN- 386

Query:   241 KNWQIPVYTMED 252
             KNW+IPVYTM++
Sbjct:   387 KNWEIPVYTMDE 398


>TAIR|locus:2135773 [details] [associations]
            symbol:AT4G12700 "AT4G12700" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0016757
            "transferase activity, transferring glycosyl groups" evidence=ISM]
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL049640 EMBL:AL161534
            HOGENOM:HOG000238373 ProtClustDB:CLSN2685765 eggNOG:NOG294715
            EMBL:BT010366 EMBL:AK227814 IPI:IPI00534392 PIR:T06628
            RefSeq:NP_193006.1 UniGene:At.28234 PaxDb:Q9SU16 PRIDE:Q9SU16
            EnsemblPlants:AT4G12700.1 GeneID:826882 KEGG:ath:AT4G12700
            TAIR:At4g12700 InParanoid:Q9SU16 OMA:FKEGHYL PhylomeDB:Q9SU16
            ArrayExpress:Q9SU16 Genevestigator:Q9SU16 Uniprot:Q9SU16
        Length = 561

 Score = 169 (64.5 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 52/196 (26%), Positives = 95/196 (48%)

Query:     5 YDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINR 64
             +D E + E   + LD  + W        K G +   H+    RV         + L++ +
Sbjct:   318 FDFEHLKEAASM-LDQVQFWADWGKWYKKNGLK--LHLVEDFRVTPMKLVDVKDTLIMRK 374

Query:    65 --TASPLS-WFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLV-DYDSIHVRR 120
               T  P + W+  C+  +  S +  P + L    +++L +    I + L  DYD+IH+ R
Sbjct:   375 FGTVEPDNYWYRVCEG-ETESVVQRPWNLL--WKSKRLMEIVSAIASRLNWDYDAIHIER 431

Query:   121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
             GD+ + ++        ++P+L++DT P +IL  +++ +  GR L+IA+NE    FF+PL 
Sbjct:   432 GDKARNKE--------VWPNLEKDTSPSSILSTLQDKIEQGRNLYIATNEPELSFFNPLK 483

Query:   181 VRYNLAYSSNFSDILD 196
              +Y   +   F D+ D
Sbjct:   484 DKYKPHFLDEFKDLWD 499


>TAIR|locus:2059767 [details] [associations]
            symbol:AT2G04280 "AT2G04280" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0005794
            "Golgi apparatus" evidence=IDA] [GO:0007020 "microtubule
            nucleation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
            [GO:0005802 "trans-Golgi network" evidence=IDA] [GO:0016757
            "transferase activity, transferring glycosyl groups" evidence=ISM]
            GO:GO:0005794 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005768
            GO:GO:0005802 EMBL:AC007213 HOGENOM:HOG000238373
            ProtClustDB:CLSN2685765 EMBL:AY056207 EMBL:BT015416 IPI:IPI00544511
            PIR:G84455 RefSeq:NP_565310.1 UniGene:At.41329 UniGene:At.70130
            STRING:Q9SI07 PaxDb:Q9SI07 PRIDE:Q9SI07 ProMEX:Q9SI07
            EnsemblPlants:AT2G04280.1 GeneID:814966 KEGG:ath:AT2G04280
            TAIR:At2g04280 eggNOG:NOG294715 InParanoid:Q9SI07 OMA:RHLYIAT
            PhylomeDB:Q9SI07 ArrayExpress:Q9SI07 Genevestigator:Q9SI07
            Uniprot:Q9SI07
        Length = 568

 Score = 157 (60.3 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 51/196 (26%), Positives = 92/196 (46%)

Query:     5 YDLELISETVPVILDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNLLLINR 64
             +D E + E   V LD ++ W        K   R   H+    RV         + L++ +
Sbjct:   323 FDFEHLKEAASV-LDEAQFWAQWGKLRKKRRNRLNLHLVEDFRVTPMKLAAVKDTLIMRK 381

Query:    65 TAS--PLS-WFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLV-DYDSIHVRR 120
               S  P + W+  C+     S +  P   L    + +L +    I + L  DYD++H+ R
Sbjct:   382 FGSVEPDNYWYRVCEGDAE-SVVKRPWHLL--WKSRRLMEIVSAIASRLNWDYDAVHIER 438

Query:   121 GDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFFSPLA 180
             G++ + ++        ++P+L+ DT P A+L  +++ V  GR L+IA+NE    FF+PL 
Sbjct:   439 GEKARNKE--------VWPNLEADTSPSALLSTLQDKVEEGRHLYIATNEGELSFFNPLK 490

Query:   181 VRYNLAYSSNFSDILD 196
              +Y   +  ++ D+ D
Sbjct:   491 DKYATHFLYDYKDLWD 506


>TAIR|locus:2138228 [details] [associations]
            symbol:SUB1 "AT4G08810" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0005509
            "calcium ion binding" evidence=IDA] [GO:0042175 "nuclear outer
            membrane-endoplasmic reticulum membrane network" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016757
            "transferase activity, transferring glycosyl groups" evidence=ISM]
            GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005509
            GO:GO:0042175 EMBL:AL161512 EMBL:AL161813 EMBL:AY056392
            EMBL:BT002655 IPI:IPI00523921 PIR:F85088 RefSeq:NP_192621.1
            UniGene:At.26331 PaxDb:Q9LE45 PRIDE:Q9LE45
            EnsemblPlants:AT4G08810.1 GeneID:826452 KEGG:ath:AT4G08810
            TAIR:At4g08810 eggNOG:NOG266543 HOGENOM:HOG000238373
            InParanoid:Q9LE45 OMA:NCSDPRV PhylomeDB:Q9LE45
            ProtClustDB:CLSN2685765 Genevestigator:Q9LE45 Uniprot:Q9LE45
        Length = 552

 Score = 146 (56.5 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 52/196 (26%), Positives = 94/196 (47%)

Query:     5 YDLELISETVPVI-----LDNSKIWYHVLMTSMKLGARGVAHVEGVSRVNLNDNRRYSNL 59
             +D E + ET  ++     L + K W    +   K+  R V     VS + L+ ++  S +
Sbjct:   312 FDFEHLKETASIVEEGEFLRDWKKWNR--LHKRKVPVRKVK-THRVSPLQLSKDK--STI 366

Query:    60 LLIN-RTASPLS-WFMECKDRKNHSALMLPHSFLPSMAAEKLRDAADKIKALLV-DYDSI 116
             +     T  P + W+  C+ + +       H+   S   ++L +   +I   +  D+D++
Sbjct:   367 IWRQFDTPEPENYWYRVCEGQASKYVERPWHALWKS---KRLMNIVSEISGKMDWDFDAV 423

Query:   117 HVRRGDRLKTRKDRYGVDRSLFPHLDRDTRPEAILCRIKNWVPPGRTLFIASNERTPGFF 176
             HV RG++ K +K        L+PHLD DT P+AIL ++K  V   R L++A+NE    +F
Sbjct:   424 HVVRGEKAKNKK--------LWPHLDADTWPDAILTKLKGLVQVWRNLYVATNEPFYNYF 475

Query:   177 SPLAVRYNLAYSSNFS 192
               L  +Y +    ++S
Sbjct:   476 DKLRSQYKVHLLDDYS 491


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      255       255   0.00085  114 3  11 22  0.43    33
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  203 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.94u 0.08s 22.02t   Elapsed:  00:00:06
  Total cpu time:  21.94u 0.08s 22.02t   Elapsed:  00:00:06
  Start:  Fri May 10 03:01:13 2013   End:  Fri May 10 03:01:19 2013

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