Query 025302
Match_columns 255
No_of_seqs 210 out of 686
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 07:37:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025302.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025302hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vr3_A Acireductone dioxygenas 100.0 6.1E-54 2.1E-58 373.3 21.2 178 10-187 12-189 (191)
2 1zrr_A E-2/E-2' protein; nicke 100.0 4.6E-36 1.6E-40 257.6 8.4 153 17-173 6-170 (179)
3 3h8u_A Uncharacterized conserv 98.9 5.4E-09 1.8E-13 80.4 9.2 81 74-168 41-123 (125)
4 1v70_A Probable antibiotics sy 98.9 3.2E-09 1.1E-13 77.3 7.5 63 95-162 41-104 (105)
5 1x82_A Glucose-6-phosphate iso 98.8 1.7E-08 5.7E-13 85.4 10.0 67 95-161 86-155 (190)
6 3fjs_A Uncharacterized protein 98.8 9.9E-09 3.4E-13 79.5 7.7 62 95-161 49-110 (114)
7 1yfu_A 3-hydroxyanthranilate-3 98.8 1.5E-08 5.2E-13 87.3 8.8 56 93-149 46-101 (174)
8 2b8m_A Hypothetical protein MJ 98.8 9.9E-09 3.4E-13 78.3 6.8 66 95-164 40-105 (117)
9 1fi2_A Oxalate oxidase, germin 98.8 3.2E-08 1.1E-12 84.0 9.6 82 70-162 71-156 (201)
10 2oa2_A BH2720 protein; 1017534 98.7 9.4E-08 3.2E-12 76.7 11.3 68 95-162 56-125 (148)
11 2gu9_A Tetracenomycin polyketi 98.7 2.2E-08 7.5E-13 74.3 7.0 62 95-161 34-98 (113)
12 4i4a_A Similar to unknown prot 98.7 2.8E-08 9.6E-13 76.5 7.8 61 95-160 47-107 (128)
13 1vj2_A Novel manganese-contain 98.7 2.1E-08 7.2E-13 78.3 6.9 63 95-162 61-123 (126)
14 4e2g_A Cupin 2 conserved barre 98.7 2.2E-08 7.5E-13 76.9 6.8 71 74-160 43-113 (126)
15 3d82_A Cupin 2, conserved barr 98.7 1.3E-08 4.5E-13 74.7 5.2 50 94-148 41-91 (102)
16 1yhf_A Hypothetical protein SP 98.7 2.9E-08 1E-12 74.9 7.2 51 95-150 53-103 (115)
17 2o8q_A Hypothetical protein; c 98.7 2.6E-08 9E-13 77.6 7.0 85 69-167 38-123 (134)
18 2ozj_A Cupin 2, conserved barr 98.7 1.7E-08 5.9E-13 76.6 5.7 50 95-149 51-100 (114)
19 3ibm_A Cupin 2, conserved barr 98.7 2.9E-08 9.8E-13 82.4 7.1 63 95-162 69-132 (167)
20 3d0j_A Uncharacterized protein 98.7 1.8E-08 6.3E-13 84.1 5.9 92 91-186 38-134 (140)
21 2pfw_A Cupin 2, conserved barr 98.7 4.3E-08 1.5E-12 74.1 7.2 59 95-160 47-105 (116)
22 1lr5_A Auxin binding protein 1 98.7 4.8E-08 1.6E-12 79.2 7.6 68 95-162 54-126 (163)
23 3ht1_A REMF protein; cupin fol 98.7 4E-08 1.4E-12 76.5 6.8 63 95-162 52-116 (145)
24 2i45_A Hypothetical protein; n 98.6 1.9E-08 6.4E-13 75.8 4.1 50 95-148 40-90 (107)
25 3l2h_A Putative sugar phosphat 98.6 7.3E-08 2.5E-12 77.9 7.8 79 75-167 49-129 (162)
26 3kgz_A Cupin 2 conserved barre 98.6 5.1E-08 1.7E-12 80.6 6.4 64 95-163 57-120 (156)
27 2vqa_A SLL1358 protein, MNCA; 98.6 2.3E-07 7.8E-12 83.8 11.0 79 73-161 53-132 (361)
28 2f4p_A Hypothetical protein TM 98.6 1E-07 3.5E-12 77.0 7.7 63 95-161 61-123 (147)
29 2q30_A Uncharacterized protein 98.6 8.6E-08 2.9E-12 71.2 6.5 62 95-162 46-109 (110)
30 2vqa_A SLL1358 protein, MNCA; 98.6 2.8E-07 9.6E-12 83.2 10.8 67 95-161 247-314 (361)
31 1zvf_A 3-hydroxyanthranilate 3 98.6 1.7E-07 5.7E-12 80.9 8.5 56 94-149 46-104 (176)
32 1dgw_A Canavalin; duplicated s 98.6 2.4E-07 8.2E-12 77.6 9.2 75 74-160 43-119 (178)
33 4b29_A Dimethylsulfoniopropion 98.5 2.5E-07 8.5E-12 82.1 9.4 65 94-163 144-208 (217)
34 3jzv_A Uncharacterized protein 98.5 1E-07 3.5E-12 79.7 6.0 63 95-162 66-128 (166)
35 2opk_A Hypothetical protein; p 98.5 1.4E-07 4.7E-12 73.1 6.4 62 96-160 47-109 (112)
36 1j58_A YVRK protein; cupin, de 98.5 2.4E-07 8.2E-12 84.7 9.0 77 74-161 81-157 (385)
37 3rns_A Cupin 2 conserved barre 98.5 3E-07 1E-11 79.2 8.6 71 73-160 38-108 (227)
38 3i7d_A Sugar phosphate isomera 98.5 2.4E-07 8.2E-12 76.3 7.7 75 75-163 46-123 (163)
39 3lwc_A Uncharacterized protein 98.5 1.4E-07 4.7E-12 74.7 5.9 76 73-167 41-116 (119)
40 2fqp_A Hypothetical protein BP 98.5 2.4E-07 8.3E-12 69.1 6.9 59 95-156 31-90 (97)
41 2bnm_A Epoxidase; oxidoreducta 98.5 3.6E-07 1.2E-11 75.5 7.9 61 97-158 135-196 (198)
42 1o5u_A Novel thermotoga mariti 98.5 3.9E-07 1.3E-11 70.5 7.3 50 95-149 43-92 (101)
43 1j58_A YVRK protein; cupin, de 98.4 1.1E-06 3.9E-11 80.2 11.3 67 95-161 270-337 (385)
44 3cew_A Uncharacterized cupin p 98.4 3.7E-07 1.3E-11 70.4 6.8 80 66-161 21-102 (125)
45 3rns_A Cupin 2 conserved barre 98.4 8.7E-07 3E-11 76.3 9.7 57 95-157 166-222 (227)
46 1o4t_A Putative oxalate decarb 98.4 3.8E-07 1.3E-11 72.0 6.8 57 95-156 70-127 (133)
47 1y9q_A Transcriptional regulat 98.4 6.1E-07 2.1E-11 74.2 8.3 58 96-159 120-177 (192)
48 2cav_A Protein (canavalin); vi 98.4 6.8E-07 2.3E-11 85.7 9.8 78 73-161 87-165 (445)
49 1sef_A Conserved hypothetical 98.4 1.2E-06 4.2E-11 77.3 10.7 59 95-158 195-255 (274)
50 2qnk_A 3-hydroxyanthranilate 3 98.4 5.1E-07 1.7E-11 83.0 8.3 56 95-152 44-100 (286)
51 3h7j_A Bacilysin biosynthesis 98.4 3.9E-07 1.3E-11 79.1 6.6 62 95-161 159-220 (243)
52 1fxz_A Glycinin G1; proglycini 98.4 2.1E-06 7.2E-11 83.1 11.7 71 94-165 350-423 (476)
53 4e2q_A Ureidoglycine aminohydr 98.4 7.7E-07 2.6E-11 80.5 8.1 72 75-161 189-260 (266)
54 2d5f_A Glycinin A3B4 subunit; 98.4 1.4E-06 4.8E-11 84.7 10.2 72 94-166 379-453 (493)
55 1uij_A Beta subunit of beta co 98.3 1.3E-06 4.4E-11 82.9 9.2 77 73-160 50-127 (416)
56 2ea7_A 7S globulin-1; beta bar 98.3 1.5E-06 5E-11 83.1 9.6 77 73-160 62-139 (434)
57 4h7l_A Uncharacterized protein 98.3 4.9E-07 1.7E-11 76.5 5.6 58 95-161 58-118 (157)
58 3c3v_A Arachin ARAH3 isoform; 98.3 2.3E-06 8E-11 83.7 11.0 72 94-166 384-458 (510)
59 1fxz_A Glycinin G1; proglycini 98.3 1.1E-06 3.9E-11 84.9 8.2 80 70-160 47-148 (476)
60 2arc_A ARAC, arabinose operon 98.3 7.9E-06 2.7E-10 64.0 11.5 49 96-149 32-80 (164)
61 3qac_A 11S globulin SEED stora 98.3 1.5E-06 5E-11 84.3 8.6 81 70-161 49-166 (465)
62 1juh_A Quercetin 2,3-dioxygena 98.3 1.8E-06 6.2E-11 79.4 8.7 63 97-160 65-128 (350)
63 2xlg_A SLL1785 protein, CUCA; 98.3 5E-07 1.7E-11 80.1 4.7 65 95-159 56-137 (239)
64 1y3t_A Hypothetical protein YX 98.3 1.4E-06 4.8E-11 77.1 7.3 61 95-161 231-292 (337)
65 3bcw_A Uncharacterized protein 98.3 6.7E-07 2.3E-11 71.6 4.6 65 70-149 47-111 (123)
66 1sfn_A Conserved hypothetical 98.3 3.8E-06 1.3E-10 73.3 9.7 73 74-161 167-239 (246)
67 2e9q_A 11S globulin subunit be 98.3 1.8E-06 6.1E-11 83.3 8.3 81 70-161 62-163 (459)
68 2d5f_A Glycinin A3B4 subunit; 98.3 2.4E-06 8.2E-11 83.1 9.0 79 69-160 43-148 (493)
69 4axo_A EUTQ, ethanolamine util 98.2 1.5E-06 5.1E-11 72.7 6.3 64 95-167 78-141 (151)
70 3c3v_A Arachin ARAH3 isoform; 98.2 2.4E-06 8.1E-11 83.7 8.5 82 69-161 46-162 (510)
71 2phl_A Phaseolin; plant SEED s 98.2 3.6E-06 1.2E-10 79.8 9.5 78 73-161 53-137 (397)
72 1y3t_A Hypothetical protein YX 98.2 2.2E-06 7.5E-11 75.8 7.5 60 95-160 59-119 (337)
73 3nw4_A Gentisate 1,2-dioxygena 98.2 1E-06 3.5E-11 83.1 5.6 57 95-156 116-173 (368)
74 3fz3_A Prunin; TREE NUT allerg 98.2 6.9E-06 2.4E-10 80.9 10.9 72 94-166 406-480 (531)
75 2d40_A Z3393, putative gentisa 98.2 2E-06 6.7E-11 79.6 6.7 59 95-158 113-172 (354)
76 1rc6_A Hypothetical protein YL 98.2 3.7E-06 1.3E-10 73.5 8.1 57 95-156 192-250 (261)
77 3bu7_A Gentisate 1,2-dioxygena 98.1 3.4E-06 1.2E-10 80.0 7.1 59 95-158 307-366 (394)
78 1juh_A Quercetin 2,3-dioxygena 98.1 5.4E-06 1.8E-10 76.2 7.7 58 94-156 264-321 (350)
79 3ksc_A LEGA class, prolegumin; 98.1 7.1E-06 2.4E-10 80.1 8.6 82 69-161 44-146 (496)
80 2pyt_A Ethanolamine utilizatio 98.1 2.8E-06 9.7E-11 68.5 4.8 47 96-148 70-116 (133)
81 3h7j_A Bacilysin biosynthesis 98.1 5.9E-06 2E-10 71.6 6.9 57 95-156 47-104 (243)
82 2vpv_A Protein MIF2, MIF2P; nu 98.1 6.1E-06 2.1E-10 70.0 6.6 54 96-154 104-157 (166)
83 1sq4_A GLXB, glyoxylate-induce 98.1 6.7E-06 2.3E-10 73.4 7.2 56 96-156 84-139 (278)
84 1uij_A Beta subunit of beta co 98.0 2.1E-05 7E-10 74.7 10.6 67 94-162 261-342 (416)
85 2phl_A Phaseolin; plant SEED s 98.0 2.2E-05 7.5E-10 74.4 10.8 68 93-162 250-325 (397)
86 3bu7_A Gentisate 1,2-dioxygena 98.0 9.8E-06 3.4E-10 76.9 8.2 58 95-156 136-194 (394)
87 3ksc_A LEGA class, prolegumin; 98.0 3.5E-05 1.2E-09 75.2 12.0 84 78-162 344-439 (496)
88 1sq4_A GLXB, glyoxylate-induce 98.0 1.4E-05 4.7E-10 71.4 8.4 68 75-156 194-261 (278)
89 3kgl_A Cruciferin; 11S SEED gl 98.0 2.2E-05 7.4E-10 76.2 10.1 86 76-162 307-404 (466)
90 2e9q_A 11S globulin subunit be 98.0 2.1E-05 7.3E-10 75.8 10.0 86 76-162 306-403 (459)
91 3es1_A Cupin 2, conserved barr 98.0 9.7E-06 3.3E-10 69.0 6.4 73 75-162 82-154 (172)
92 3s7i_A Allergen ARA H 1, clone 97.9 2.4E-05 8.3E-10 74.6 9.1 67 94-162 275-367 (418)
93 3s7i_A Allergen ARA H 1, clone 97.9 3.2E-05 1.1E-09 73.8 9.7 75 69-156 42-118 (418)
94 3qac_A 11S globulin SEED stora 97.9 3.2E-05 1.1E-09 75.0 9.8 86 76-162 307-404 (465)
95 3lag_A Uncharacterized protein 97.9 8.3E-06 2.9E-10 62.2 4.0 62 95-158 30-92 (98)
96 2ea7_A 7S globulin-1; beta bar 97.9 3.8E-05 1.3E-09 73.4 9.1 67 94-162 278-358 (434)
97 2d40_A Z3393, putative gentisa 97.8 1.5E-05 5.2E-10 73.6 5.2 49 95-148 281-329 (354)
98 2o1q_A Putative acetyl/propion 97.8 8.6E-06 2.9E-10 66.2 3.1 79 74-166 46-124 (145)
99 2ozi_A Hypothetical protein RP 97.8 2.1E-05 7.3E-10 60.4 4.3 62 95-158 30-92 (98)
100 2q1z_B Anti-sigma factor CHRR, 97.8 0.00013 4.3E-09 62.3 9.5 63 75-156 128-190 (195)
101 2cav_A Protein (canavalin); vi 97.7 0.00011 3.7E-09 70.5 10.0 68 93-162 292-371 (445)
102 3kgl_A Cruciferin; 11S SEED gl 97.7 7.7E-05 2.6E-09 72.3 7.8 79 70-160 42-180 (466)
103 1rc6_A Hypothetical protein YL 97.6 0.0001 3.4E-09 64.3 7.1 53 101-158 80-132 (261)
104 3nw4_A Gentisate 1,2-dioxygena 97.6 7.4E-05 2.5E-09 70.5 6.0 51 95-150 292-342 (368)
105 3es4_A Uncharacterized protein 97.5 0.00019 6.7E-09 57.7 6.9 64 72-150 42-105 (116)
106 1sef_A Conserved hypothetical 97.5 0.00019 6.5E-09 63.3 7.2 52 100-156 82-133 (274)
107 3ebr_A Uncharacterized RMLC-li 97.5 0.00013 4.3E-09 60.9 5.2 69 72-157 42-112 (159)
108 3gbg_A TCP pilus virulence reg 97.5 0.00021 7.1E-09 61.4 6.7 63 75-148 10-72 (276)
109 4e2q_A Ureidoglycine aminohydr 97.3 0.00022 7.5E-09 64.5 5.6 78 75-166 73-151 (266)
110 2y0o_A Probable D-lyxose ketol 97.2 0.00039 1.3E-08 59.6 5.5 58 94-151 65-145 (175)
111 3st7_A Capsular polysaccharide 97.2 0.0011 3.8E-08 58.9 8.6 62 95-156 285-350 (369)
112 3fz3_A Prunin; TREE NUT allerg 97.2 0.00061 2.1E-08 67.2 7.5 85 59-159 40-206 (531)
113 3myx_A Uncharacterized protein 97.1 0.0015 5.1E-08 58.3 8.4 69 99-173 62-135 (238)
114 1sfn_A Conserved hypothetical 97.0 0.00098 3.4E-08 58.0 6.0 42 102-148 68-109 (246)
115 3o14_A Anti-ecfsigma factor, C 96.9 0.0018 6.3E-08 56.6 6.8 54 75-147 46-99 (223)
116 3cjx_A Protein of unknown func 96.9 0.0009 3.1E-08 56.2 4.5 60 74-149 45-104 (165)
117 3bal_A Acetylacetone-cleaving 96.8 0.0012 4.2E-08 55.4 5.1 80 68-162 43-122 (153)
118 3myx_A Uncharacterized protein 95.9 0.0083 2.8E-07 53.4 5.3 47 99-149 183-229 (238)
119 2pa7_A DTDP-6-deoxy-3,4-keto-h 95.8 0.031 1.1E-06 45.9 7.8 66 95-163 48-115 (141)
120 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 94.3 0.11 3.7E-06 44.5 7.1 56 95-151 61-128 (185)
121 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 94.2 0.1 3.5E-06 45.2 6.8 57 95-151 73-135 (197)
122 1dzr_A DTDP-4-dehydrorhamnose 94.1 0.12 4.1E-06 44.1 7.0 56 95-151 60-128 (183)
123 1yud_A Hypothetical protein SO 94.0 0.11 3.8E-06 44.3 6.6 88 68-167 45-139 (170)
124 2ixk_A DTDP-4-dehydrorhamnose 93.9 0.15 5E-06 43.6 7.2 56 95-151 62-129 (184)
125 3o14_A Anti-ecfsigma factor, C 93.5 0.059 2E-06 47.0 4.1 47 95-151 159-205 (223)
126 3ejk_A DTDP sugar isomerase; Y 93.3 0.5 1.7E-05 40.0 9.5 56 95-150 66-131 (174)
127 3kmh_A D-lyxose isomerase; cup 93.2 0.12 4E-06 46.7 5.6 57 94-150 118-197 (246)
128 3ryk_A DTDP-4-dehydrorhamnose 93.1 0.23 7.8E-06 43.4 7.2 57 95-151 83-151 (205)
129 3bb6_A Uncharacterized protein 93.1 0.63 2.1E-05 38.1 9.3 75 88-162 20-102 (127)
130 1eyb_A Homogentisate 1,2-dioxy 93.1 0.11 3.6E-06 50.8 5.5 44 101-149 177-220 (471)
131 1oi6_A PCZA361.16; epimerase, 92.8 0.25 8.4E-06 43.0 6.9 55 96-151 61-128 (205)
132 2c0z_A NOVW; isomerase, epimer 92.8 0.25 8.4E-06 43.5 7.0 56 96-151 69-136 (216)
133 3eqe_A Putative cystein deoxyg 92.7 1 3.4E-05 37.9 10.4 68 95-162 82-154 (171)
134 2gm6_A Cysteine dioxygenase ty 92.4 1 3.6E-05 38.7 10.3 70 93-162 90-168 (208)
135 4gjz_A Lysine-specific demethy 91.3 0.28 9.5E-06 40.4 5.4 48 101-148 143-224 (235)
136 2vec_A YHAK, pirin-like protei 90.7 0.89 3E-05 40.5 8.4 63 95-161 77-143 (256)
137 1wlt_A 176AA long hypothetical 88.9 1.4 4.7E-05 38.1 7.8 56 95-151 78-146 (196)
138 2qjv_A Uncharacterized IOLB-li 88.8 0.75 2.6E-05 41.7 6.4 49 95-147 168-233 (270)
139 1upi_A DTDP-4-dehydrorhamnose 87.7 2.3 7.8E-05 37.6 8.6 56 96-151 80-147 (225)
140 2qnk_A 3-hydroxyanthranilate 3 87.0 0.81 2.8E-05 42.0 5.5 52 103-161 227-278 (286)
141 3d8c_A Hypoxia-inducible facto 86.8 2.1 7.2E-05 39.1 8.2 39 123-161 259-298 (349)
142 1tq5_A Protein YHHW; bicupin, 86.4 2.7 9.3E-05 36.9 8.4 63 95-161 54-120 (242)
143 4diq_A Lysine-specific demethy 86.2 6.3 0.00022 38.5 11.6 71 95-165 178-269 (489)
144 2xdv_A MYC-induced nuclear ant 86.2 2.4 8.2E-05 40.5 8.5 55 95-149 153-223 (442)
145 1dgw_X Canavalin; duplicated s 86.0 1.1 3.6E-05 33.3 4.7 40 73-122 37-77 (79)
146 1vrb_A Putative asparaginyl hy 81.5 3.9 0.00013 37.3 7.5 54 95-148 154-241 (342)
147 4hn1_A Putative 3-epimerase in 80.2 9 0.00031 33.2 9.0 56 96-151 58-125 (201)
148 3al5_A HTYW5, JMJC domain-cont 79.3 6.6 0.00022 35.5 8.2 38 124-163 239-277 (338)
149 1zx5_A Mannosephosphate isomer 77.1 1 3.5E-05 40.7 2.1 45 103-147 118-180 (300)
150 2p17_A Pirin-like protein; GK1 76.2 8.8 0.0003 34.2 8.0 62 95-160 52-116 (277)
151 3dl3_A Tellurite resistance pr 75.3 9.5 0.00033 30.7 7.2 71 92-163 26-101 (119)
152 1qwr_A Mannose-6-phosphate iso 75.0 1.2 4.2E-05 40.4 2.1 24 125-148 158-181 (319)
153 3eln_A Cysteine dioxygenase ty 70.6 48 0.0017 28.1 11.0 70 94-163 82-161 (200)
154 2wfp_A Mannose-6-phosphate iso 70.4 2.2 7.5E-05 40.1 2.7 23 126-148 241-263 (394)
155 2oyz_A UPF0345 protein VPA0057 68.4 8.4 0.00029 29.9 5.2 44 102-148 41-84 (94)
156 3k2o_A Bifunctional arginine d 67.1 5.7 0.0002 36.5 4.7 27 124-150 255-281 (336)
157 2rg4_A Uncharacterized protein 65.4 6.6 0.00022 33.5 4.5 56 92-147 113-191 (216)
158 3kv4_A PHD finger protein 8; e 64.8 6.4 0.00022 37.8 4.7 29 122-150 298-326 (447)
159 1j1l_A Pirin; beta sandwich, c 63.5 16 0.00056 32.8 6.9 62 95-160 53-118 (290)
160 2pqq_A Putative transcriptiona 63.1 19 0.00065 26.3 6.2 35 102-136 46-81 (149)
161 3uss_A Putative uncharacterize 62.5 75 0.0026 27.3 10.9 70 94-163 85-163 (211)
162 3pua_A GRC5, PHD finger protei 61.5 4.5 0.00015 38.4 2.9 25 122-146 241-265 (392)
163 1ywk_A 4-deoxy-L-threo-5-hexos 60.9 17 0.00059 33.3 6.6 49 95-144 196-249 (289)
164 3pur_A Lysine-specific demethy 60.1 5 0.00017 39.6 3.1 25 122-146 363-387 (528)
165 3k3o_A PHF8, PHD finger protei 60.0 5.1 0.00017 37.8 3.0 26 122-147 214-239 (371)
166 2qdr_A Uncharacterized protein 59.2 10 0.00035 34.9 4.7 51 97-159 106-159 (303)
167 1pmi_A PMI, phosphomannose iso 59.0 4.9 0.00017 38.4 2.7 22 126-147 267-288 (440)
168 2qdr_A Uncharacterized protein 58.4 12 0.00042 34.4 5.1 30 99-144 235-264 (303)
169 2xxz_A Lysine-specific demethy 57.8 5.1 0.00017 37.3 2.5 42 124-167 278-319 (332)
170 3dn7_A Cyclic nucleotide bindi 56.7 23 0.00078 27.6 5.9 35 102-136 48-83 (194)
171 1xru_A 4-deoxy-L-threo-5-hexos 56.5 14 0.00047 33.8 5.1 56 95-152 196-256 (282)
172 3kv5_D JMJC domain-containing 56.3 6.3 0.00022 38.2 3.0 43 105-147 291-358 (488)
173 1qwr_A Mannose-6-phosphate iso 56.3 14 0.00048 33.4 5.2 37 101-142 268-304 (319)
174 2yu1_A JMJC domain-containing 55.6 11 0.00036 36.4 4.4 26 123-148 264-289 (451)
175 3mdp_A Cyclic nucleotide-bindi 55.0 19 0.00066 26.1 4.9 63 59-136 19-85 (142)
176 3i3q_A Alpha-ketoglutarate-dep 54.7 15 0.00051 31.6 4.8 41 106-146 135-177 (211)
177 3avr_A Lysine-specific demethy 54.0 17 0.00059 35.8 5.7 44 124-169 337-380 (531)
178 1xe7_A YML079WP, hypothetical 54.0 25 0.00086 30.5 6.1 54 94-147 92-151 (203)
179 1dgw_Y Canavalin; duplicated s 53.9 27 0.00093 26.7 5.7 36 125-162 6-41 (93)
180 3loi_A Putative uncharacterize 53.0 26 0.00089 29.7 6.0 50 94-143 65-122 (172)
181 1zx5_A Mannosephosphate isomer 52.6 23 0.00078 31.8 5.9 50 102-159 247-297 (300)
182 2wfp_A Mannose-6-phosphate iso 52.3 22 0.00074 33.3 5.9 52 100-159 340-391 (394)
183 2fmy_A COOA, carbon monoxide o 52.1 58 0.002 25.8 7.7 35 102-137 45-80 (220)
184 1pmi_A PMI, phosphomannose iso 51.5 32 0.0011 32.7 7.0 57 101-160 378-438 (440)
185 2lcj_A PAB POLC intein; hydrol 51.2 44 0.0015 27.4 7.1 12 129-140 111-122 (185)
186 3dv8_A Transcriptional regulat 51.0 48 0.0016 26.1 7.0 62 59-135 16-78 (220)
187 3kv9_A JMJC domain-containing 50.8 8.5 0.00029 36.6 2.9 26 122-147 242-267 (397)
188 3eo6_A Protein of unknown func 50.7 19 0.00066 28.5 4.5 42 103-147 55-96 (106)
189 3idb_B CAMP-dependent protein 49.1 70 0.0024 24.0 7.5 34 102-136 79-113 (161)
190 2oz6_A Virulence factor regula 49.0 36 0.0012 26.5 6.0 36 102-137 31-67 (207)
191 3gyd_A CNMP-BD protein, cyclic 48.6 43 0.0015 26.4 6.4 34 102-135 80-114 (187)
192 3b02_A Transcriptional regulat 48.4 42 0.0014 26.2 6.3 36 102-137 17-53 (195)
193 1ft9_A Carbon monoxide oxidati 47.5 70 0.0024 25.4 7.6 34 102-136 41-75 (222)
194 4ask_A Lysine-specific demethy 46.9 23 0.00078 34.9 5.3 24 124-147 312-335 (510)
195 3ryp_A Catabolite gene activat 46.1 43 0.0015 26.1 6.0 35 102-136 37-72 (210)
196 3hqx_A UPF0345 protein aciad03 45.2 47 0.0016 26.5 6.0 44 103-149 58-101 (111)
197 2bgc_A PRFA; bacterial infecti 44.9 44 0.0015 27.1 6.0 38 102-139 36-73 (238)
198 4ev0_A Transcription regulator 44.7 39 0.0013 26.5 5.5 35 102-136 40-75 (216)
199 3tht_A Alkylated DNA repair pr 44.4 22 0.00074 32.8 4.5 37 109-145 230-266 (345)
200 3fx3_A Cyclic nucleotide-bindi 43.9 44 0.0015 26.8 5.8 62 59-135 24-86 (237)
201 3iwz_A CAP-like, catabolite ac 42.4 43 0.0015 26.5 5.5 63 59-136 24-87 (230)
202 3d0s_A Transcriptional regulat 42.2 48 0.0016 26.3 5.8 35 102-136 47-82 (227)
203 2a1x_A Phytanoyl-COA dioxygena 41.1 19 0.00064 31.2 3.4 46 122-167 213-261 (308)
204 3kcc_A Catabolite gene activat 40.0 55 0.0019 27.1 6.0 35 102-136 87-122 (260)
205 2iuw_A Alkylated repair protei 38.4 13 0.00045 32.1 1.9 37 108-144 160-206 (238)
206 3arc_X Photosystem II PSBX pro 38.2 20 0.00069 23.8 2.3 19 196-214 5-23 (39)
207 4ava_A Lysine acetyltransferas 36.7 52 0.0018 28.1 5.4 34 102-135 54-87 (333)
208 2lok_A Uncharacterized protein 36.2 1.1E+02 0.0039 26.3 7.5 80 31-138 33-116 (197)
209 1zyb_A Transcription regulator 35.8 48 0.0016 26.8 4.9 65 59-136 31-96 (232)
210 2z69_A DNR protein; beta barre 35.3 22 0.00075 26.2 2.5 34 102-135 53-87 (154)
211 3la7_A Global nitrogen regulat 35.2 64 0.0022 26.3 5.6 34 102-135 61-95 (243)
212 2zcw_A TTHA1359, transcription 35.1 1.6E+02 0.0054 22.9 8.9 56 103-158 26-84 (202)
213 3e97_A Transcriptional regulat 34.4 83 0.0028 25.0 6.0 62 59-135 19-81 (231)
214 3e6c_C CPRK, cyclic nucleotide 33.4 72 0.0024 25.9 5.6 36 102-137 50-86 (250)
215 1znp_A Hypothetical protein AT 32.6 71 0.0024 26.6 5.4 70 67-146 35-112 (154)
216 2ptm_A Hyperpolarization-activ 31.5 62 0.0021 25.4 4.7 31 102-135 112-142 (198)
217 1o5l_A Transcriptional regulat 30.8 54 0.0018 26.1 4.3 34 102-135 40-74 (213)
218 2gau_A Transcriptional regulat 30.5 50 0.0017 26.3 4.1 62 59-135 23-85 (232)
219 2lnu_A Uncharacterized protein 30.4 1.3E+02 0.0045 25.7 6.9 80 31-138 26-111 (190)
220 3pna_A CAMP-dependent protein 29.8 89 0.0031 23.3 5.2 30 102-135 79-108 (154)
221 2qcs_B CAMP-dependent protein 29.1 1E+02 0.0035 25.4 5.9 33 103-135 199-233 (291)
222 4dsd_A Putative periplasmic pr 28.7 74 0.0025 25.1 4.7 55 75-132 3-70 (129)
223 3s57_A Alpha-ketoglutarate-dep 28.7 35 0.0012 28.8 2.9 39 106-144 132-179 (204)
224 2lqo_A Putative glutaredoxin R 27.9 1.1E+02 0.0037 22.5 5.2 43 38-82 21-64 (92)
225 2ypd_A Probable JMJC domain-co 27.8 51 0.0017 31.4 4.1 37 125-162 293-330 (392)
226 3m3i_A Putative uncharacterize 27.7 1E+02 0.0034 27.3 5.7 67 68-144 56-157 (225)
227 3bz1_X Photosystem II PSBX pro 26.7 39 0.0013 23.5 2.3 20 195-214 14-33 (50)
228 2cw8_A Endonuclease PI-pkoii; 26.1 56 0.0019 31.4 4.2 16 129-144 114-129 (537)
229 4f8a_A Potassium voltage-gated 26.0 1.3E+02 0.0046 22.0 5.6 33 102-138 68-100 (160)
230 3shr_A CGMP-dependent protein 24.9 1.2E+02 0.0041 25.2 5.6 33 103-135 199-233 (299)
231 2qjv_A Uncharacterized IOLB-li 24.6 2.5E+02 0.0086 25.1 7.9 69 68-149 25-101 (270)
232 3bpz_A Potassium/sodium hyperp 23.1 75 0.0026 25.0 3.8 30 102-135 113-142 (202)
233 2d93_A RAP guanine nucleotide 22.7 1.4E+02 0.0047 21.6 5.0 52 103-158 59-114 (134)
234 2lj0_A Sorbin and SH3 domain-c 21.9 42 0.0014 23.3 1.8 35 127-168 23-57 (65)
235 1aba_A Glutaredoxin; electron 20.3 1.5E+02 0.0051 20.4 4.5 53 38-90 21-82 (87)
No 1
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=100.00 E-value=6.1e-54 Score=373.27 Aligned_cols=178 Identities=63% Similarity=1.129 Sum_probs=170.9
Q ss_pred cceeeEeecCCCCCCCCCCCCCCCCcCCHhHHhhcCeEEEEeCCCCcCCHHHHHHHHHhcCCCeeeEEEECCCCCCChHH
Q 025302 10 EVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEE 89 (255)
Q Consensus 10 ~m~~aw~~dd~~~d~rlph~~~p~~~vs~~~L~~lGV~yw~~d~~~~e~~~~ld~L~~erGY~~~DvVtlsp~~~Pn~e~ 89 (255)
-|+||||||++++|||+||+.+|+++||+++|+++||+||+++++.++.+.+|++|++++||++.|+++++|+++||+++
T Consensus 12 ~~~~~~~~~~~~~d~~~ph~~~~~~~v~~~~L~~~GV~~w~~~~~~~~~~~~l~~l~~~~gy~~~D~v~~~p~~~p~~~~ 91 (191)
T 1vr3_A 12 HMVQAWYMDESTADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEE 91 (191)
T ss_dssp -CCEEEEBCSCCSCTTSCCBCSSCCBCCHHHHHHTTCEEEECCGGGTTSCHHHHHHHHHHTCCEEEEEEESTTTSTTHHH
T ss_pred hhheeeeccCCccccCcccccCCCCccCHHHHHhcCcEEEECCCccccccHHHHHHHHhcCCCceeEEEECCCcCcchhh
Confidence 49999999999999999999999999999999999999999988777678899999999999999999999997799999
Q ss_pred HhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCCCCeeecC
Q 025302 90 KIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFN 169 (255)
Q Consensus 90 k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~~gWva~~ 169 (255)
|+++|+.||+|+++|++||++|+|+|.+++.+|+|+++.+++||+|+||+|++|||+++++++++++|+|.+++||+|++
T Consensus 92 k~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~~~W~~~~ 171 (191)
T 1vr3_A 92 KIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYN 171 (191)
T ss_dssp HHHHHHSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSSCCCCCEE
T ss_pred hhccCCcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCCCCccCCC
Confidence 99999999999999999999999999999877889999999999999999999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHhhh
Q 025302 170 RPHDHLPARDMFKISCRR 187 (255)
Q Consensus 170 R~~D~~~~R~~Yl~~~~~ 187 (255)
||+|++++|++||+++..
T Consensus 172 r~~~~~~~r~~y~~~~~~ 189 (191)
T 1vr3_A 172 RPADHFDARVQYMSFLEG 189 (191)
T ss_dssp SCCTTSHHHHHHHHHHHH
T ss_pred CchhccHHHHHHHHHhhh
Confidence 999999999999999764
No 2
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=100.00 E-value=4.6e-36 Score=257.63 Aligned_cols=153 Identities=25% Similarity=0.440 Sum_probs=133.2
Q ss_pred ecCCCCCCCCCCCCCCCCcCCHhHHhhcCeEEEEeCCC-----CcC-------CHHHHHHHHHhcCCCeeeEEEECCCCC
Q 025302 17 MDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDAD-----NYE-------TDEELKKIREDRGYSYMDFCEVCPEKL 84 (255)
Q Consensus 17 ~dd~~~d~rlph~~~p~~~vs~~~L~~lGV~yw~~d~~-----~~e-------~~~~ld~L~~erGY~~~DvVtlsp~~~ 84 (255)
++++++..++....+++.+ +++|+++||.||+++++ ..+ ++++|++|++++||+++|++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~i--~~~L~~~gV~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~l~~~~gy~~~D~i~~~~~~- 82 (179)
T 1zrr_A 6 FSVKDPQNSLWHSTNAEEI--QQQLNAKGVRFERWQADRDLGAAPTAETVIAAYQHAIDKLVAEKGYQSWDVISLRADN- 82 (179)
T ss_dssp ECSSCSSCEEEEECCSHHH--HHHHHHTTCCCCCCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHCCSEEEEECCCTTC-
T ss_pred ecCCCcCCcceeeCCHHHH--HHHHHHcCcEEEEcCCCCccCCcccHHHHHHHHHHHHHHHHHHhCCCcccEEEEcCCC-
Confidence 4455555555555566666 79999999999666553 111 45689999999999999999999985
Q ss_pred CChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCCCC
Q 025302 85 PNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPV 164 (255)
Q Consensus 85 Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~~g 164 (255)
|++++|+++|+.||.|+++|++||++|+|+|.++ .+|+|+++.+++||+|+||+|++|||+.+++++++++|+|.+++|
T Consensus 83 p~~~~~~~~~~~~H~H~~~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~~~ 161 (179)
T 1zrr_A 83 PQKEALREKFLNEHTHGEDEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNPEG 161 (179)
T ss_dssp THHHHHHHHHHSCBEESSCEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCGGG
T ss_pred CChhHhhcccccceECChheEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCCCC
Confidence 9999999999999999999999999999999998 678999999999999999999999999999999999999999999
Q ss_pred eeecCCCCC
Q 025302 165 WTPFNRPHD 173 (255)
Q Consensus 165 Wva~~R~~D 173 (255)
|++++|..+
T Consensus 162 w~~~~~g~~ 170 (179)
T 1zrr_A 162 WIAQFTGDD 170 (179)
T ss_dssp EESCSSCCC
T ss_pred ccccCCCch
Confidence 999988643
No 3
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.91 E-value=5.4e-09 Score=80.45 Aligned_cols=81 Identities=11% Similarity=0.146 Sum_probs=60.9
Q ss_pred eeEEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCc
Q 025302 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (255)
Q Consensus 74 ~DvVtlsp~~~Pn~e~k~~kF~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~ 152 (255)
.-.+++.|+. ...+|.|.. +|++||++|++.+.+. +++ .+.+++||.+.+|+|+.|++....+..
T Consensus 41 ~~~~~~~pg~----------~~~~H~H~~~~e~~~Vl~G~~~~~~~--~~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~ 106 (125)
T 3h8u_A 41 VVVWHAHPGQ----------EIASHVHPHGQDTWTVISGEAEYHQG--NGI--VTHLKAGDIAIAKPGQVHGAMNSGPEP 106 (125)
T ss_dssp EEEEEECTTC----------EECCC-CTTCEEEEEEEECEEEEECS--TTC--EEEEETTEEEEECTTCCCEEEECSSSC
T ss_pred EEEEEECCCC----------cCCcccCCCCeEEEEEEEeEEEEEEC--CCe--EEEeCCCCEEEECCCCEEEeEeCCCCC
Confidence 3456666653 367999996 8999999999999773 344 367999999999999999998877776
Q ss_pred EEEEEEecCC-CCeeec
Q 025302 153 IKAMRLFVGD-PVWTPF 168 (255)
Q Consensus 153 vkAiRlF~~~-~gWva~ 168 (255)
+..+-++... +++.+.
T Consensus 107 ~~~l~v~~p~~~~~~~~ 123 (125)
T 3h8u_A 107 FIFVSVVAPGNAGFALA 123 (125)
T ss_dssp EEEEEEEESTTCCCCCC
T ss_pred EEEEEEECCCcccchhh
Confidence 7777777653 555543
No 4
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.91 E-value=3.2e-09 Score=77.28 Aligned_cols=63 Identities=17% Similarity=0.253 Sum_probs=51.6
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCC
Q 025302 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 95 ~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~ 162 (255)
..+|.|+. +|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++....+.....+-++..+
T Consensus 41 ~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~p~ 104 (105)
T 1v70_A 41 QKVHVHEGSDKVYYALEGEVVVRVG---EE--EALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAPR 104 (105)
T ss_dssp EEEECCSSCEEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEESC
T ss_pred CCccCCCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeCCC
Confidence 46899996 7999999999999884 44 4679999999999999999987666667766666543
No 5
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.82 E-value=1.7e-08 Score=85.44 Aligned_cols=67 Identities=16% Similarity=0.224 Sum_probs=56.2
Q ss_pred ccccccCc---ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 95 FEEHLHTD---EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 95 ~~EH~H~d---dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
...|.|.. +|++||++|++.+.+.+..++++.+.+++||+|++|+|+.|++....+..++.+-++..
T Consensus 86 ~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~ 155 (190)
T 1x82_A 86 TKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPA 155 (190)
T ss_dssp CCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEET
T ss_pred CCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECC
Confidence 34688863 79999999999999997767888899999999999999999998766666666656544
No 6
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.81 E-value=9.9e-09 Score=79.54 Aligned_cols=62 Identities=18% Similarity=0.252 Sum_probs=50.4
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
..+|.|+.+|+.||++|++.+.+. ++ ...+++||.|.+|+|+.|++...++..+..+-+|..
T Consensus 49 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~p~ 110 (114)
T 3fjs_A 49 VGSHSVAGPSTIQCLEGEVEIGVD---GA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVLVD 110 (114)
T ss_dssp EEEECCSSCEEEEEEESCEEEEET---TE--EEEECTTEEEEECTTCCEEEEESSSEEEEEEEECC-
T ss_pred cCceeCCCcEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEeCC
Confidence 678999999999999999999884 44 467999999999999999998876655555444433
No 7
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.79 E-value=1.5e-08 Score=87.27 Aligned_cols=56 Identities=21% Similarity=0.270 Sum_probs=48.3
Q ss_pred ccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC
Q 025302 93 NFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (255)
Q Consensus 93 kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~ 149 (255)
..+.||.|+.||.||+++|+....++|. ++.-.+.+++||+++||+|++|+....+
T Consensus 46 ~r~d~H~h~~dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 46 HRTDYHDDPLEEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CCCCEEECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCccCcCCCCceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 3589999999999999999999999973 4445699999999999999999986543
No 8
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.79 E-value=9.9e-09 Score=78.31 Aligned_cols=66 Identities=9% Similarity=0.084 Sum_probs=52.9
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCCCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPV 164 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~~g 164 (255)
..+|.|+.+|+.||++|++.+.+. ++.+ +.+++||++.+|+|+.|++...++.....+-++...+.
T Consensus 40 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~~~-~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~ 105 (117)
T 2b8m_A 40 MPKHYSNSYVHLIIIKGEMTLTLE---DQEP-HNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPK 105 (117)
T ss_dssp CCCEECSSCEEEEEEESEEEEEET---TSCC-EEEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGG
T ss_pred CCCEeCCCcEEEEEEeCEEEEEEC---CEEE-EEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCC
Confidence 468999999999999999999885 3321 27999999999999999998877666676666454443
No 9
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=98.76 E-value=3.2e-08 Score=83.98 Aligned_cols=82 Identities=20% Similarity=0.201 Sum_probs=64.5
Q ss_pred CCCeeeEEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCC---CcEEEEEEecCCEEEeCCCCcccc
Q 025302 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRN---EKWIRIWVKKGGMIVLPAGCYHRF 145 (255)
Q Consensus 70 GY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~d-dEIryIleGsG~Fdvrd~d---d~wirI~ve~GDLIvVPAGt~HrF 145 (255)
|+ ..-.+.+.|+. ...+|.|+. +|+.||++|++.+.+.+.+ ++.++..+++||++++|+|+.|++
T Consensus 71 ~~-~~~~~~l~pg~----------~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~ 139 (201)
T 1fi2_A 71 GV-SMNRVDFAPGG----------TNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQ 139 (201)
T ss_dssp SC-EEEEEEECTTC----------EEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEE
T ss_pred ce-EEEEEEECCCC----------CCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEE
Confidence 44 33456777664 256899997 7999999999999997554 676678899999999999999999
Q ss_pred eeCCCCcEEEEEEecCC
Q 025302 146 TLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 146 tl~~~~~vkAiRlF~~~ 162 (255)
....+.....+-+|..+
T Consensus 140 ~N~g~~~~~~l~v~~~~ 156 (201)
T 1fi2_A 140 FNVGKTEAYMVVSFNSQ 156 (201)
T ss_dssp EECSSSCEEEEEEESSS
T ss_pred EeCCCCCEEEEEEECCC
Confidence 87665667777777553
No 10
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.74 E-value=9.4e-08 Score=76.66 Aligned_cols=68 Identities=16% Similarity=0.289 Sum_probs=54.6
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCC
Q 025302 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 95 ~~EH~H~d-dEIryIleGsG~Fdvrd~dd-~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~ 162 (255)
..+|.|.+ +|+.||++|++.+.+.+..+ .+++..+++||+|.+|+|+.|++....+..++.+-++..+
T Consensus 56 ~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 125 (148)
T 2oa2_A 56 IGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIYAPP 125 (148)
T ss_dssp CCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEEESC
T ss_pred cCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEEECCC
Confidence 56899985 79999999999999985432 2456789999999999999999987666667766666543
No 11
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.73 E-value=2.2e-08 Score=74.34 Aligned_cols=62 Identities=18% Similarity=0.247 Sum_probs=50.6
Q ss_pred cccc--ccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 95 FEEH--LHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 95 ~~EH--~H~-ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
..+| .|+ .+|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++...++...+.+-++..
T Consensus 34 ~~~h~~~H~~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~ 98 (113)
T 2gu9_A 34 EGGPDNRHRGADQWLFVVDGAGEAIVD---GH--TQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHP 98 (113)
T ss_dssp EECCCSSSCCCEEEEEEEECCEEEEET---TE--EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred cCCcccccCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 4567 999 79999999999999884 44 367999999999999999998766666666666544
No 12
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.73 E-value=2.8e-08 Score=76.50 Aligned_cols=61 Identities=16% Similarity=0.318 Sum_probs=50.1
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEec
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~ 160 (255)
...|.|+..|+.||++|++.+.+. ++ ...+++||++++|+|+.|++....+..++.+-++-
T Consensus 47 ~~~H~H~~~Ei~~v~~G~~~~~i~---~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~f 107 (128)
T 4i4a_A 47 SFRHSHNEYELFIVIQGNAIIRIN---DE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIWW 107 (128)
T ss_dssp CCCBCCSSEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEEEE
T ss_pred cCCEecCCeEEEEEEeCEEEEEEC---CE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEEEE
Confidence 578999999999999999999984 44 46799999999999999999876655555554443
No 13
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.72 E-value=2.1e-08 Score=78.28 Aligned_cols=63 Identities=21% Similarity=0.213 Sum_probs=51.3
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~ 162 (255)
+.+|.|+.+|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++....+.....+-++..+
T Consensus 61 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~~~ 123 (126)
T 1vj2_A 61 IDRHSHPWEHEIFVLKGKLTVLKE---QG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIPKE 123 (126)
T ss_dssp EEEECCSSCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEEGG
T ss_pred CCceeCCCcEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 568999999999999999999885 33 3679999999999999999987665556666555443
No 14
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.72 E-value=2.2e-08 Score=76.91 Aligned_cols=71 Identities=18% Similarity=0.307 Sum_probs=55.9
Q ss_pred eeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcE
Q 025302 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (255)
Q Consensus 74 ~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~v 153 (255)
.-.+++.|+. ...+|.|+.+|+.||++|++.+.+. ++ ...+++||.+.+|+|+.|++...++ ..
T Consensus 43 ~~~~~~~pg~----------~~~~H~H~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~ 106 (126)
T 4e2g_A 43 LNWVRIEPNT----------EMPAHEHPHEQAGVMLEGTLELTIG---EE--TRVLRPGMAYTIPGGVRHRARTFED-GC 106 (126)
T ss_dssp EEEEEECTTC----------EEEEECCSSEEEEEEEEECEEEEET---TE--EEEECTTEEEEECTTCCEEEECCTT-CE
T ss_pred EEEEEECCCC----------cCCCccCCCceEEEEEEeEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEECCC-CE
Confidence 3456666653 2468999999999999999999884 43 3679999999999999999987655 45
Q ss_pred EEEEEec
Q 025302 154 KAMRLFV 160 (255)
Q Consensus 154 kAiRlF~ 160 (255)
..+-+|.
T Consensus 107 ~~l~v~~ 113 (126)
T 4e2g_A 107 LVLDIFS 113 (126)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 6665654
No 15
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.71 E-value=1.3e-08 Score=74.66 Aligned_cols=50 Identities=28% Similarity=0.429 Sum_probs=43.9
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeC
Q 025302 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (255)
Q Consensus 94 F~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~ 148 (255)
.+.+|.|++ +|+.||++|++.+.+. ++ ...+++||.+.+|+|+.|++...
T Consensus 41 ~~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~ 91 (102)
T 3d82_A 41 EFVWHEHADTDEVFIVMEGTLQIAFR---DQ--NITLQAGEMYVIPKGVEHKPMAK 91 (102)
T ss_dssp ECCCBCCTTCCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCBEEEEE
T ss_pred CCCceeCCCCcEEEEEEeCEEEEEEC---CE--EEEEcCCCEEEECCCCeEeeEcC
Confidence 367999998 9999999999999885 33 46799999999999999999875
No 16
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.71 E-value=2.9e-08 Score=74.86 Aligned_cols=51 Identities=20% Similarity=0.308 Sum_probs=44.6
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~ 150 (255)
..+|.|+.+|+.||++|++.+.+. |+ ...+++||++.+|+|+.|++...++
T Consensus 53 ~~~H~H~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~ 103 (115)
T 1yhf_A 53 IGRHSSPGDAMVTILSGLAEITID---QE--TYRVAEGQTIVMPAGIPHALYAVEA 103 (115)
T ss_dssp EEEECCSSEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTSCEEEEESSC
T ss_pred cCCEECCCcEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEECCC
Confidence 568999999999999999999884 44 3679999999999999999987664
No 17
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.71 E-value=2.6e-08 Score=77.62 Aligned_cols=85 Identities=19% Similarity=0.253 Sum_probs=58.0
Q ss_pred cCCCeeeEEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCccccee
Q 025302 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 69 rGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
.|....-++.+... |+ ..+.+|.|+. +|+.||++|++.+.+.+ ++ ...+++||++++|+|+.|++..
T Consensus 38 ~g~~~~~~~~~~~~--~g------~~~~~H~H~~~~E~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~g~~H~~~~ 105 (134)
T 2o8q_A 38 GGMFGAHVIRAIPG--KE------AKPTWHTHTVGFQLFYVLRGWVEFEYED--IG--AVMLEAGGSAFQPPGVRHRELR 105 (134)
T ss_dssp TTSCEEEEEEECC-------------CCCEEECCSCEEEEEEESEEEEEETT--TE--EEEEETTCEEECCTTCCEEEEE
T ss_pred CCceEEEEEEEecC--CC------CCCCCEECCCCcEEEEEEeCEEEEEECC--cE--EEEecCCCEEEECCCCcEEeEe
Confidence 34444457776632 11 1257999998 99999999999998852 13 4679999999999999999987
Q ss_pred CCCCcEEEEEEecCCCCeee
Q 025302 148 DTDNYIKAMRLFVGDPVWTP 167 (255)
Q Consensus 148 ~~~~~vkAiRlF~~~~gWva 167 (255)
..+. .+.+-++. ++++..
T Consensus 106 ~~~~-~~~l~~~~-p~~~~~ 123 (134)
T 2o8q_A 106 HSDD-LEVLEIVS-PAGFAT 123 (134)
T ss_dssp ECTT-CEEEEEES-STTCCE
T ss_pred CCCC-eEEEEEEC-CCchhe
Confidence 4443 35454443 344443
No 18
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.70 E-value=1.7e-08 Score=76.60 Aligned_cols=50 Identities=12% Similarity=0.187 Sum_probs=43.7
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~ 149 (255)
..+|.|+.+|+.||++|++.+.+. ++ ...+++||.|.+|+|+.|++...+
T Consensus 51 ~~~H~h~~~e~~~vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~~~~ 100 (114)
T 2ozj_A 51 VSEEEYFGDTLYLILQGEAVITFD---DQ--KIDLVPEDVLMVPAHKIHAIAGKG 100 (114)
T ss_dssp CCCBCCSSCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECTTCCBEEEEEE
T ss_pred cccEECCCCeEEEEEeCEEEEEEC---CE--EEEecCCCEEEECCCCcEEEEeCC
Confidence 468999999999999999999884 44 467999999999999999998754
No 19
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.69 E-value=2.9e-08 Score=82.43 Aligned_cols=63 Identities=8% Similarity=0.096 Sum_probs=51.9
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC-CCcEEEEEEecCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKAMRLFVGD 162 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~-~~~vkAiRlF~~~ 162 (255)
...|.|..+|+.||++|++.+.+. |+ ...+++||+|.+|+|+.|++.... +..+..+-++..+
T Consensus 69 ~~~H~H~~~E~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 69 TTLERHEHTHVVMVVRGHAEVVLD---DR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp CCCBBCSSCEEEEEEESEEEEEET---TE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred CCCccCCCcEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 568999999999999999999884 44 467999999999999999998765 6666666665544
No 20
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.69 E-value=1.8e-08 Score=84.13 Aligned_cols=92 Identities=15% Similarity=0.153 Sum_probs=63.1
Q ss_pred hhccccccccCc-ceEEEEEeceEEEEEEeCCCc---EEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCC-CCe
Q 025302 91 IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD-PVW 165 (255)
Q Consensus 91 ~~kF~~EH~H~d-dEIryIleGsG~Fdvrd~dd~---wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~-~gW 165 (255)
+..+-..|.|++ ||+|++++|+....+++.++. --.+.+++|++++||+|+.|+..+.+.- +.| ++-.. .|=
T Consensus 38 ~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~--~vL-LiEp~nTGd 114 (140)
T 3d0j_A 38 IEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDT--KMM-YVQDSNCSM 114 (140)
T ss_dssp TTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTC--EEE-EEEESCCCG
T ss_pred cccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCce--EEE-EEEeCCCCC
Confidence 345667999997 999999999999999964211 1258899999999999999999986654 433 44322 111
Q ss_pred eecCCCCCCcHHHHHHHHHhh
Q 025302 166 TPFNRPHDHLPARDMFKISCR 186 (255)
Q Consensus 166 va~~R~~D~~~~R~~Yl~~~~ 186 (255)
..-.| ......+.++++.+.
T Consensus 115 ~~se~-t~~~~~~i~~i~~~~ 134 (140)
T 3d0j_A 115 DNSDF-CDLSKEEIEYIQTNA 134 (140)
T ss_dssp GGEEE-EECCHHHHHHHHHHH
T ss_pred CCCcc-ccCCHHHHHHHHHHH
Confidence 11011 134567777777654
No 21
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.68 E-value=4.3e-08 Score=74.06 Aligned_cols=59 Identities=19% Similarity=0.160 Sum_probs=48.6
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEec
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~ 160 (255)
..+|.|+.+|+.||++|++.+.+. ++ ...+++||.+.+|+|+.|++...+. ...+-+|.
T Consensus 47 ~~~H~H~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~v~~ 105 (116)
T 2pfw_A 47 GYVHAHRHSQVSYVVEGEFHVNVD---GV--IKVLTAGDSFFVPPHVDHGAVCPTG--GILIDTFS 105 (116)
T ss_dssp EEEECCSSEEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEEESSC--EEEEEEEE
T ss_pred CCcEECCcceEEEEEeeEEEEEEC---CE--EEEeCCCCEEEECcCCceeeEeCCC--cEEEEEEC
Confidence 568999999999999999999884 44 4679999999999999999987652 45555554
No 22
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.66 E-value=4.8e-08 Score=79.22 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=53.7
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCC----CcEEEEEEecCCEEEeCCCCcccceeCC-CCcEEEEEEecCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRN----EKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKAMRLFVGD 162 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~d----d~wirI~ve~GDLIvVPAGt~HrFtl~~-~~~vkAiRlF~~~ 162 (255)
...|.|..+|+.||++|++.+.+.+.+ ++.-++.+++||++.+|+|+.|++.... +..+..+-++..+
T Consensus 54 ~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 126 (163)
T 1lr5_A 54 TPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRP 126 (163)
T ss_dssp CCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEESS
T ss_pred CCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECCC
Confidence 468999999999999999999997421 1222578999999999999999998766 5566766666554
No 23
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.66 E-value=4e-08 Score=76.55 Aligned_cols=63 Identities=21% Similarity=0.199 Sum_probs=52.0
Q ss_pred ccccccCcceEEEEEeceEEEE--EEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFD--VRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fd--vrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~ 162 (255)
..+|.|...|+.||++|++.+. +. ++ ...+++||.+.+|+|+.|++...++.....+-++...
T Consensus 52 ~~~H~H~~~e~~~vl~G~~~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 52 TPPHFHEWEHEIYVLEGSMGLVLPDQ---GR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp CCCEECSSCEEEEEEEECEEEEEGGG---TE--EEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred CCCccCCCceEEEEEEeEEEEEEeEC---CE--EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 5699999999999999999998 53 44 4679999999999999999988766667766666443
No 24
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.64 E-value=1.9e-08 Score=75.81 Aligned_cols=50 Identities=24% Similarity=0.417 Sum_probs=41.5
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeC
Q 025302 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (255)
Q Consensus 95 ~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~ 148 (255)
+.+|.|+. +|+.||++|++.+.+.+ ++ ...+++||.+.+|+|+.|++...
T Consensus 40 ~~~H~H~~~~E~~~Vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~ 90 (107)
T 2i45_A 40 YGWHTHGYSDKVLFAVEGDMAVDFAD--GG--SMTIREGEMAVVPKSVSHRPRSE 90 (107)
T ss_dssp CCCBCC--CCEEEEESSSCEEEEETT--SC--EEEECTTEEEEECTTCCEEEEEE
T ss_pred CcceeCCCCCEEEEEEeCEEEEEECC--Cc--EEEECCCCEEEECCCCcEeeEeC
Confidence 45899998 99999999999998853 13 46799999999999999999874
No 25
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.63 E-value=7.3e-08 Score=77.89 Aligned_cols=79 Identities=19% Similarity=0.271 Sum_probs=61.8
Q ss_pred eEEEECCCCCCChHHHhhcccccccc-CcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCC-CcccceeCCCCc
Q 025302 75 DFCEVCPEKLPNYEEKIKNFFEEHLH-TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG-CYHRFTLDTDNY 152 (255)
Q Consensus 75 DvVtlsp~~~Pn~e~k~~kF~~EH~H-~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAG-t~HrFtl~~~~~ 152 (255)
-.+++.|+. ....+|.| ..+|+.||++|++.+.+. ++ .+.+++||.|.+|+| +.|++....+..
T Consensus 49 ~~~~l~pg~---------~~~~~H~H~~~~E~~~Vl~G~~~~~~~---~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~ 114 (162)
T 3l2h_A 49 HLIQIEPGK---------ESTEYHLHHYEEEAVYVLSGKGTLTME---ND--QYPIAPGDFVGFPCHAAAHSISNDGTET 114 (162)
T ss_dssp EEEEECTTC---------BSSSSBEESSCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTSCCEEEECCSSSC
T ss_pred EEEEECCCC---------cCCCCccCCCCCEEEEEEEEEEEEEEC---CE--EEEeCCCCEEEECCCCceEEeEeCCCCC
Confidence 446777764 12568999 679999999999999884 44 367999999999998 999998877777
Q ss_pred EEEEEEecCCCCeee
Q 025302 153 IKAMRLFVGDPVWTP 167 (255)
Q Consensus 153 vkAiRlF~~~~gWva 167 (255)
++.+-++...+.-+.
T Consensus 115 ~~~l~v~~p~~~~~~ 129 (162)
T 3l2h_A 115 LVCLVIGQRLDQDVV 129 (162)
T ss_dssp EEEEEEEECCSEEEE
T ss_pred EEEEEEECCCCCCeE
Confidence 887877776655443
No 26
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.61 E-value=5.1e-08 Score=80.63 Aligned_cols=64 Identities=16% Similarity=0.202 Sum_probs=53.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDP 163 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~~ 163 (255)
...|.|..+|+.||++|++.+.+. |+ ...+++||++.+|+|+.|.+....+..+..+-++..+.
T Consensus 57 ~~~H~H~~~E~~~Vl~G~~~v~v~---g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~ 120 (156)
T 3kgz_A 57 STLERHAHVHAVMIHRGHGQCLVG---ET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAAR 120 (156)
T ss_dssp CCCBBCSSCEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESSC
T ss_pred cCceeCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCC
Confidence 468999999999999999999884 44 36799999999999999999887776777777776554
No 27
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.60 E-value=2.3e-07 Score=83.80 Aligned_cols=79 Identities=22% Similarity=0.222 Sum_probs=61.7
Q ss_pred eeeEEEECCCCCCChHHHhhccccccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCC
Q 025302 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 151 (255)
Q Consensus 73 ~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~-ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~ 151 (255)
..-.+++.|+. ....|.|. .+|+.||++|++.+.+.+.+++.....+++||++.+|+|+.|++....+.
T Consensus 53 ~~~~~~l~pg~----------~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~ 122 (361)
T 2vqa_A 53 AGVYMSLEPGA----------IRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPD 122 (361)
T ss_dssp EEEEEEECTTC----------EEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSS
T ss_pred eeEEEEEcCCC----------CCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCC
Confidence 44566677654 34689999 79999999999999997665543347899999999999999999887655
Q ss_pred cEEEEEEecC
Q 025302 152 YIKAMRLFVG 161 (255)
Q Consensus 152 ~vkAiRlF~~ 161 (255)
.++.+-+|..
T Consensus 123 ~~~~l~v~~~ 132 (361)
T 2vqa_A 123 TAKFLLVFND 132 (361)
T ss_dssp CEEEEEEESS
T ss_pred CEEEEEEECC
Confidence 6676656544
No 28
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.60 E-value=1e-07 Score=77.01 Aligned_cols=63 Identities=21% Similarity=0.315 Sum_probs=52.2
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
..+|.|+.+|+.||++|++.+.+.+ +. ...+++||+|.+|+|+.|++....+..+..+-++..
T Consensus 61 ~~~H~H~~~E~~~Vl~G~~~~~~~~---~~-~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~ 123 (147)
T 2f4p_A 61 THWHSHPGGQILIVTRGKGFYQERG---KP-ARILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQ 123 (147)
T ss_dssp ECSEECTTCEEEEEEEEEEEEEETT---SC-CEEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECC
T ss_pred cCceECCCceEEEEEeCEEEEEECC---EE-EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 4689999999999999999998853 21 156999999999999999998877666777767655
No 29
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.59 E-value=8.6e-08 Score=71.19 Aligned_cols=62 Identities=23% Similarity=0.283 Sum_probs=48.8
Q ss_pred ccccccCc-ceE-EEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCC
Q 025302 95 FEEHLHTD-EEI-RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 95 ~~EH~H~d-dEI-ryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~ 162 (255)
..+|.|+. .|+ .||++|++.+.+.+ ++ ...+++||++.+|+|+.|++...++ .+.+-+|..+
T Consensus 46 ~~~H~H~~~~e~~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~~~~p~ 109 (110)
T 2q30_A 46 LPVHSHNIEGELNIVVLEGEGEFVGDG--DA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVLVTIAPP 109 (110)
T ss_dssp EEEECCSSSCEEEEEEEESCEEEECGG--GC--EEEECTTEEEEEETTSCEEEEESSS--EEEEEEEESC
T ss_pred CCcccCCCCccEEEEEEeCEEEEEeCC--CE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEEEEECCC
Confidence 57899996 688 89999999998741 23 3679999999999999999987654 4556566543
No 30
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.58 E-value=2.8e-07 Score=83.22 Aligned_cols=67 Identities=18% Similarity=0.253 Sum_probs=56.7
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 95 ~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
...|.|.. +|+.||++|++.+.+.+.+++.....+++||.+++|+|..|++....+..++.+-++..
T Consensus 247 ~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~ 314 (361)
T 2vqa_A 247 RQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFND 314 (361)
T ss_dssp EEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESS
T ss_pred cccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECC
Confidence 55799998 99999999999999976666645678999999999999999998766666777777754
No 31
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.56 E-value=1.7e-07 Score=80.93 Aligned_cols=56 Identities=25% Similarity=0.298 Sum_probs=48.1
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCC---CcEEEEEEecCCEEEeCCCCcccceeCC
Q 025302 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRN---EKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (255)
Q Consensus 94 F~~EH~H~ddEIryIleGsG~Fdvrd~d---d~wirI~ve~GDLIvVPAGt~HrFtl~~ 149 (255)
.+.||.|+.||.||+++|+....++|.+ .+...|.+.+||+++||+|++|+....+
T Consensus 46 r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~ 104 (176)
T 1zvf_A 46 RTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFA 104 (176)
T ss_dssp CSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECT
T ss_pred CCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccC
Confidence 4889988889999999999999999733 1455799999999999999999986543
No 32
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=98.56 E-value=2.4e-07 Score=77.58 Aligned_cols=75 Identities=12% Similarity=0.216 Sum_probs=57.2
Q ss_pred eeEEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCC-C
Q 025302 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD-N 151 (255)
Q Consensus 74 ~DvVtlsp~~~Pn~e~k~~kF~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~-~ 151 (255)
.-.+++.|+. ....| |.+ +|+.||++|++.+.+.+.++.. ...+++||.+++|+|+.|++....+ .
T Consensus 43 ~~~~~l~pg~----------~~~pH-h~~a~E~~yVl~G~~~v~v~~~~~~~-~~~l~~GDv~~~P~g~~H~~~N~g~~~ 110 (178)
T 1dgw_A 43 VLEYCSKPNT----------LLLPH-HSDSDLLVLVLEGQAILVLVNPDGRD-TYKLDQGDAIKIQAGTPFYLINPDNNQ 110 (178)
T ss_dssp EEEEEECTTE----------EEEEE-EESSEEEEEEEESEEEEEEEETTEEE-EEEEETTEEEEECTTCCEEEEECCSSS
T ss_pred EEEEEecCCc----------EecCc-CCCCCEEEEEEeEEEEEEEEeCCCcE-EEEECCCCEEEECCCCeEEEEeCCCCC
Confidence 4556677664 25789 765 9999999999999997654333 5689999999999999999977654 3
Q ss_pred cEEEEEEec
Q 025302 152 YIKAMRLFV 160 (255)
Q Consensus 152 ~vkAiRlF~ 160 (255)
.++.+-++.
T Consensus 111 ~l~~l~v~~ 119 (178)
T 1dgw_A 111 NLRILKFAI 119 (178)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEC
Confidence 666665543
No 33
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.55 E-value=2.5e-07 Score=82.05 Aligned_cols=65 Identities=28% Similarity=0.332 Sum_probs=54.1
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCCC
Q 025302 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDP 163 (255)
Q Consensus 94 F~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~~ 163 (255)
.|.+|.|..||++||++|++.|.+. +++| ..+++||.|.+|+|+.|+.++++ ..+.++-...+.+
T Consensus 144 ~yP~HsHp~EEiy~VLsG~~e~~v~--~g~~--~~l~pGd~v~ipsgv~Ha~rt~d-ePllalwvW~G~~ 208 (217)
T 4b29_A 144 DYGWHEHLPEELYSVVSGRALFHLR--NAPD--LMLEPGQTRFHPANAPHAMTTLT-DPILTLVLWRGAG 208 (217)
T ss_dssp EEEEEECSSEEEEEEEEECEEEEET--TSCC--EEECTTCEEEECTTCCEEEECCS-SCEEEEEEEESTT
T ss_pred cCCCCCCCCceEEEEEeCCEEEEEC--CCCE--EecCCCCEEEcCCCCceeEEECC-ccEEEEEEEeCCC
Confidence 4999999999999999999999995 4555 56999999999999999999655 4466666666654
No 34
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.53 E-value=1e-07 Score=79.68 Aligned_cols=63 Identities=14% Similarity=0.156 Sum_probs=52.3
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~ 162 (255)
...|.|..+|+.||++|++.+.+. |+ ...+++||.|.+|+|+.|++....+..+..+-++..+
T Consensus 66 ~~~H~H~~~E~~~Vl~G~~~~~v~---g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 128 (166)
T 3jzv_A 66 STLERHQHAHGVMILKGRGHAMVG---RA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAE 128 (166)
T ss_dssp CCCBBCSSCEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEESS
T ss_pred cCceeCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 568999999999999999999884 44 4679999999999999999987666666666666543
No 35
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.53 E-value=1.4e-07 Score=73.14 Aligned_cols=62 Identities=16% Similarity=0.163 Sum_probs=46.2
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCC-CcEEEEEEec
Q 025302 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD-NYIKAMRLFV 160 (255)
Q Consensus 96 ~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~-~~vkAiRlF~ 160 (255)
.+|.|..+|+.||++|++.+.+.+ +...+.+++||.|.+|+|+.|++...++ .....+-+|.
T Consensus 47 ~~~~~~~~E~~~Vl~G~~~l~~~~---~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 47 FWYDSPQDEWVMVVSGSAGIECEG---DTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp CCBCCSSEEEEEEEESCEEEEETT---CSSCEEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred ccccCCccEEEEEEeCeEEEEECC---EEEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 357788899999999999998863 2101679999999999999999976543 2344344443
No 36
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.52 E-value=2.4e-07 Score=84.69 Aligned_cols=77 Identities=19% Similarity=0.217 Sum_probs=60.4
Q ss_pred eeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcE
Q 025302 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (255)
Q Consensus 74 ~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~v 153 (255)
.-.+++.|+. ....|.|..+|+.||++|++.+.+.|.+++.+...+++||++++|+|+.|++...++ ..
T Consensus 81 ~~~~~l~pg~----------~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~-~~ 149 (385)
T 1j58_A 81 SVNMRLKPGA----------IRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEE-GA 149 (385)
T ss_dssp EEEEEECTTC----------EEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEE-EE
T ss_pred EEEEEECCCC----------CCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCC-CE
Confidence 3456666653 356899999999999999999999877777655689999999999999999976543 35
Q ss_pred EEEEEecC
Q 025302 154 KAMRLFVG 161 (255)
Q Consensus 154 kAiRlF~~ 161 (255)
..+-+|..
T Consensus 150 ~~~~v~~~ 157 (385)
T 1j58_A 150 EFLLVFDD 157 (385)
T ss_dssp EEEEEESC
T ss_pred EEEEEECC
Confidence 55555643
No 37
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.51 E-value=3e-07 Score=79.20 Aligned_cols=71 Identities=11% Similarity=0.276 Sum_probs=56.2
Q ss_pred eeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCc
Q 025302 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (255)
Q Consensus 73 ~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~ 152 (255)
..-.+++.|+. ...+|.|+.+|+.||++|++.|.+. |+ ...+++||++++|+|+.|.+...++
T Consensus 38 ~~~~~~~~~G~----------~~~~h~h~~~~~~~Vl~G~~~~~i~---~~--~~~l~~Gd~~~~p~~~~H~~~a~~~-- 100 (227)
T 3rns_A 38 YISLFSLAKDE----------EITAEAMLGNRYYYCFNGNGEIFIE---NN--KKTISNGDFLEITANHNYSIEARDN-- 100 (227)
T ss_dssp EEEEEEECTTC----------EEEECSCSSCEEEEEEESEEEEEES---SC--EEEEETTEEEEECSSCCEEEEESSS--
T ss_pred EEEEEEECCCC----------ccCccccCCCEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEECCC--
Confidence 44566677653 4789999999999999999999995 33 3679999999999999999987664
Q ss_pred EEEEEEec
Q 025302 153 IKAMRLFV 160 (255)
Q Consensus 153 vkAiRlF~ 160 (255)
.+.+-++.
T Consensus 101 ~~~l~i~~ 108 (227)
T 3rns_A 101 LKLIEIGE 108 (227)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEe
Confidence 55554443
No 38
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.51 E-value=2.4e-07 Score=76.27 Aligned_cols=75 Identities=19% Similarity=0.210 Sum_probs=59.1
Q ss_pred eEEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCC--CcccceeCCCC
Q 025302 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG--CYHRFTLDTDN 151 (255)
Q Consensus 75 DvVtlsp~~~Pn~e~k~~kF~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAG--t~HrFtl~~~~ 151 (255)
-++++.|+. .....|.|.. +|+.||++|++.+.+. ++ .+.+++||.|.+|+| +.|++....+.
T Consensus 46 ~~~~l~pG~---------~~~~~H~H~~~eE~~~Vl~G~~~~~~~---~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~ 111 (163)
T 3i7d_A 46 NLVRLEPGA---------KSSLRHYHMEQDEFVMVTEGALVLVDD---QG--EHPMVPGDCAAFPAGDPNGHQFVNRTDA 111 (163)
T ss_dssp EEEEECTTC---------BSSSSEEESSCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCCCBEEECCSSS
T ss_pred EEEEECCCC---------cCCCCccCCCCcEEEEEEECEEEEEEC---CE--EEEeCCCCEEEECCCCCcceEEEECCCC
Confidence 466777764 1235899998 7999999999999885 44 477999999999999 99999876666
Q ss_pred cEEEEEEecCCC
Q 025302 152 YIKAMRLFVGDP 163 (255)
Q Consensus 152 ~vkAiRlF~~~~ 163 (255)
.++.+-++...+
T Consensus 112 ~~~~l~v~~p~~ 123 (163)
T 3i7d_A 112 PATFLVVGTRTP 123 (163)
T ss_dssp CEEEEEEEECCS
T ss_pred CEEEEEEECCCC
Confidence 677776665544
No 39
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.50 E-value=1.4e-07 Score=74.69 Aligned_cols=76 Identities=13% Similarity=0.295 Sum_probs=52.8
Q ss_pred eeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCc
Q 025302 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (255)
Q Consensus 73 ~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~ 152 (255)
..-.+++.|+. -+.+|. ..+|+.||++|++.+.+ +|+ .+.+++||.|.+|+|+.|++.... ..
T Consensus 41 ~~~~~~~~pG~----------~~~~H~-~~~E~~~Vl~G~~~~~~---~g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~ 103 (119)
T 3lwc_A 41 TIGYGRYAPGQ----------SLTETM-AVDDVMIVLEGRLSVST---DGE--TVTAGPGEIVYMPKGETVTIRSHE-EG 103 (119)
T ss_dssp EEEEEEECTTC----------EEEEEC-SSEEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECTTCEEEEEEEE-EE
T ss_pred EEEEEEECCCC----------CcCccC-CCCEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCEEEEEcCC-CC
Confidence 34566677663 146775 77999999999999988 344 467999999999999999998653 33
Q ss_pred EEEEEEecCCCCeee
Q 025302 153 IKAMRLFVGDPVWTP 167 (255)
Q Consensus 153 vkAiRlF~~~~gWva 167 (255)
.+ .||.--|.|..
T Consensus 104 ~~--~l~v~~P~w~~ 116 (119)
T 3lwc_A 104 AL--TAYVTYPHWRP 116 (119)
T ss_dssp EE--EEEEEECC---
T ss_pred eE--EEEEECCCCcc
Confidence 33 34444344864
No 40
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.50 E-value=2.4e-07 Score=69.14 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=46.2
Q ss_pred ccccccCcc-eEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEE
Q 025302 95 FEEHLHTDE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 156 (255)
Q Consensus 95 ~~EH~H~dd-EIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAi 156 (255)
..+|.|+.+ |+.||++|++.+.+. ++. -...+++||.+.+|+|+.|++....+..++.+
T Consensus 31 ~~~H~H~~~~e~~~Vl~G~~~~~~~--~g~-~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l 90 (97)
T 2fqp_A 31 TGWHRHSMDYVVVPMTTGPLLLETP--EGS-VTSQLTRGVSYTRPEGVEHNVINPSDTEFVFV 90 (97)
T ss_dssp CCSEECCSCEEEEESSCEEEEEEET--TEE-EEEEECTTCCEEECTTCEEEEECCSSSCEEEE
T ss_pred CCCEECCCCcEEEEEeecEEEEEeC--CCC-EEEEEcCCCEEEeCCCCcccCEeCCCCcEEEE
Confidence 458999986 699999999999885 221 14679999999999999999987655444443
No 41
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.47 E-value=3.6e-07 Score=75.52 Aligned_cols=61 Identities=16% Similarity=0.196 Sum_probs=48.0
Q ss_pred ccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeC-CCCcEEEEEE
Q 025302 97 EHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD-TDNYIKAMRL 158 (255)
Q Consensus 97 EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~-~~~~vkAiRl 158 (255)
+|.|+.+|+.||++|++.+.+.+ ++..-...+++||.+.+|+|+.|++... .+...+.+-+
T Consensus 135 ~h~h~~~E~~~Vl~G~~~~~~~~-~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~v 196 (198)
T 2bnm_A 135 NSGHAGNEFLFVLEGEIHMKWGD-KENPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAV 196 (198)
T ss_dssp CCCCSSCEEEEEEESCEEEEESC-TTSCEEEEECTTCEEEECTTCCEEEEESTTSCCEEEEEE
T ss_pred cccCCCeEEEEEEeeeEEEEECC-cCCcccEEECCCCEEEeCCCCceEEEecCCCCCeEEEEE
Confidence 79999999999999999999963 1111246799999999999999999876 5544554433
No 42
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.46 E-value=3.9e-07 Score=70.51 Aligned_cols=50 Identities=20% Similarity=0.360 Sum_probs=41.7
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~ 149 (255)
+.+| |+.+|+.||++|++.+.+. +++ .+.+++||.|++|+|+.|++...+
T Consensus 43 ~~~h-H~~~E~~~Vl~G~~~~~i~--~g~--~~~l~~GD~i~ip~g~~H~~~n~~ 92 (101)
T 1o5u_A 43 FDWY-YDTNETCYILEGKVEVTTE--DGK--KYVIEKGDLVTFPKGLRCRWKVLE 92 (101)
T ss_dssp EEEE-CSSCEEEEEEEEEEEEEET--TCC--EEEEETTCEEEECTTCEEEEEEEE
T ss_pred cccc-CCceEEEEEEeCEEEEEEC--CCC--EEEECCCCEEEECCCCcEEEEeCC
Confidence 3467 8999999999999999884 244 367999999999999999987643
No 43
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.45 E-value=1.1e-06 Score=80.19 Aligned_cols=67 Identities=18% Similarity=0.204 Sum_probs=55.2
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 95 ~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
...|.|.. +|+.||++|++.+.+.+.+++--...+++||.+++|+|+.|++....+..++.+-++..
T Consensus 270 ~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~ 337 (385)
T 1j58_A 270 RELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKD 337 (385)
T ss_dssp EEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESS
T ss_pred cCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECC
Confidence 45799999 99999999999999975554323577999999999999999998766666777777764
No 44
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.44 E-value=3.7e-07 Score=70.39 Aligned_cols=80 Identities=15% Similarity=0.211 Sum_probs=55.9
Q ss_pred HHhcCCCeeeEEEECCCCCCChHHHhhcccc-ccccCcc-eEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcc
Q 025302 66 REDRGYSYMDFCEVCPEKLPNYEEKIKNFFE-EHLHTDE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYH 143 (255)
Q Consensus 66 ~~erGY~~~DvVtlsp~~~Pn~e~k~~kF~~-EH~H~dd-EIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~H 143 (255)
....++. .-++++.|+. ... .|.|+.. +++||++|++.+.+. ++ ...+++||++.+|+|+.|
T Consensus 21 ~~~~~~~-~~~~~~~pg~----------~~~~~H~H~~~e~~~~vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H 84 (125)
T 3cew_A 21 LALTGAE-VSINHLPAGA----------GVPFVHSHKQNEEIYGILSGKGFITID---GE--KIELQAGDWLRIAPDGKR 84 (125)
T ss_dssp HTCSSCE-EEEEEECTTC----------BCSSEEEESSEEEEEEEEEEEEEEEET---TE--EEEEETTEEEEECTTCCE
T ss_pred cCCCCcE-EEEEEECCCC----------CCCCCccCCCceEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcE
Confidence 3344443 3445666653 133 7999985 566699999999884 44 367999999999999999
Q ss_pred cceeCCCCcEEEEEEecC
Q 025302 144 RFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 144 rFtl~~~~~vkAiRlF~~ 161 (255)
++...++.....+-++..
T Consensus 85 ~~~~~~~~~~~~~~i~~~ 102 (125)
T 3cew_A 85 QISAASDSPIGFLCIQVK 102 (125)
T ss_dssp EEEEBTTBCEEEEEEEEE
T ss_pred EEEcCCCCCEEEEEEEcC
Confidence 998765544555544443
No 45
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.43 E-value=8.7e-07 Score=76.25 Aligned_cols=57 Identities=26% Similarity=0.360 Sum_probs=47.0
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEE
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMR 157 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiR 157 (255)
..+|.|+.+|+.||++|++.+.+. |++ ..+++||.|.+|+|+.|++..+ ...++.+-
T Consensus 166 ~~~H~H~~~e~~~Vl~G~~~~~i~---g~~--~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll 222 (227)
T 3rns_A 166 LDPHKAPGDALVTVLDGEGKYYVD---GKP--FIVKKGESAVLPANIPHAVEAE-TENFKMLL 222 (227)
T ss_dssp EEEECCSSEEEEEEEEEEEEEEET---TEE--EEEETTEEEEECTTSCEEEECC-SSCEEEEE
T ss_pred cCCEECCCcEEEEEEeEEEEEEEC---CEE--EEECCCCEEEECCCCcEEEEeC-CCCEEEEE
Confidence 579999999999999999999884 444 6799999999999999999883 33355443
No 46
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.43 E-value=3.8e-07 Score=72.00 Aligned_cols=57 Identities=23% Similarity=0.332 Sum_probs=46.6
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEE
Q 025302 95 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 156 (255)
Q Consensus 95 ~~EH~H~-ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAi 156 (255)
..+|.|+ .+|+.||++|++.+.+. ++ ...+++||.+.+|+|+.|++....+...+.+
T Consensus 70 ~~~H~H~~~~E~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l 127 (133)
T 1o4t_A 70 VGLHKHEGEFEIYYILLGEGVFHDN---GK--DVPIKAGDVCFTDSGESHSIENTGNTDLEFL 127 (133)
T ss_dssp EEEEECCSEEEEEEEEESEEEEEET---TE--EEEEETTEEEEECTTCEEEEECCSSSCEEEE
T ss_pred cCceECCCccEEEEEEeCEEEEEEC---CE--EEEeCCCcEEEECCCCcEEeEECCCCCEEEE
Confidence 4589998 59999999999999884 44 3679999999999999999987655444444
No 47
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.43 E-value=6.1e-07 Score=74.18 Aligned_cols=58 Identities=16% Similarity=0.129 Sum_probs=46.6
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEe
Q 025302 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 159 (255)
Q Consensus 96 ~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF 159 (255)
.+|.|..+|+.||++|++.+.+. |+. ..+++||.|.+|+|+.|++....+... .+-++
T Consensus 120 ~~H~h~~~E~~~Vl~G~~~~~~~---~~~--~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~ 177 (192)
T 1y9q_A 120 SPHALGVIEYIHVLEGIMKVFFD---EQW--HELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIV 177 (192)
T ss_dssp CCCSTTCEEEEEEEESCEEEEET---TEE--EEECTTCEEEEECSSSEEEEESSSCEE-EEEEE
T ss_pred CCCCCCCEEEEEEEEeEEEEEEC---CEE--EEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEE
Confidence 37888889999999999999884 444 579999999999999999987555444 44343
No 48
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.43 E-value=6.8e-07 Score=85.71 Aligned_cols=78 Identities=9% Similarity=0.142 Sum_probs=62.3
Q ss_pred eeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC-CC
Q 025302 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DN 151 (255)
Q Consensus 73 ~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~-~~ 151 (255)
..-.+++.|.. +...|.|..+|+.||++|+|.+.+-+.++. ....+++||++++|+|+.||+.... +.
T Consensus 87 s~~~~~l~Pgg----------~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~ 155 (445)
T 2cav_A 87 RVLEYCSKPNT----------LLLPHHSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQ 155 (445)
T ss_dssp EEEEEEECSSE----------EEEEEEESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEECTTCCEEEEECCSSC
T ss_pred EEEEEEECCCc----------CccCcCCCCceEEEEEeCEEEEEEEeCCCC-EEEEecCCCEEEECCCCcEEEEECCCCC
Confidence 34567777765 467885667999999999999998765544 4678999999999999999997765 66
Q ss_pred cEEEEEEecC
Q 025302 152 YIKAMRLFVG 161 (255)
Q Consensus 152 ~vkAiRlF~~ 161 (255)
.++++-+|..
T Consensus 156 ~l~~l~v~~~ 165 (445)
T 2cav_A 156 NLRILKFAIT 165 (445)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEecc
Confidence 7888887764
No 49
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.43 E-value=1.2e-06 Score=77.30 Aligned_cols=59 Identities=19% Similarity=0.271 Sum_probs=48.3
Q ss_pred ccc-cccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCC-CcEEEEEE
Q 025302 95 FEE-HLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD-NYIKAMRL 158 (255)
Q Consensus 95 ~~E-H~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~-~~vkAiRl 158 (255)
..+ |.|..+|+.||++|++.+.+. |++ ..+++||.|.+|+|+.|++....+ ..++.+-+
T Consensus 195 ~~~~H~H~~~E~~yVl~G~~~~~i~---~~~--~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~ 255 (274)
T 1sef_A 195 HAYIETHVQEHGAYLISGQGMYNLD---NEW--YPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYS 255 (274)
T ss_dssp CSSCBCCSCCEEEEEEECEEEEEET---TEE--EEEETTCEEEECTTCCEEEEEECSSSCEEEEEE
T ss_pred cCcceeccCeEEEEEEeCEEEEEEC---CEE--EEECCCCEEEECCCCCEEEEeCCCCCCEEEEEE
Confidence 345 999999999999999999884 555 679999999999999999987655 55555533
No 50
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.42 E-value=5.1e-07 Score=82.95 Aligned_cols=56 Identities=21% Similarity=0.307 Sum_probs=48.4
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCc
Q 025302 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (255)
Q Consensus 95 ~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~ 152 (255)
+.|| |++ ||.||+++|.....++| +++--.|.+.+||+++||+|++|+....++..
T Consensus 44 ~d~H-~~~~dE~FyqlkG~m~l~~~d-~g~~~~V~i~eGemfllP~gv~HsP~r~~et~ 100 (286)
T 2qnk_A 44 KDYH-IEEGEEVFYQLEGDMVLRVLE-QGKHRDVVIRQGEIFLLPARVPHSPQRFANTV 100 (286)
T ss_dssp CCEE-ECSSCEEEEEEESCEEEEEEE-TTEEEEEEECTTEEEEECTTCCEEEEECTTCE
T ss_pred ccCc-CCCCCeEEEEEeCeEEEEEEe-CCceeeEEECCCeEEEeCCCCCcCCcccCCeE
Confidence 7899 876 99999999999999997 35556799999999999999999997755533
No 51
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.40 E-value=3.9e-07 Score=79.07 Aligned_cols=62 Identities=19% Similarity=0.222 Sum_probs=53.9
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
..+|.|..+|+.||++|++.+.+. +++ ..+++||.|.+|+|+.|++....+...+.+-+|..
T Consensus 159 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~~--~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p 220 (243)
T 3h7j_A 159 MPFHKHRNEQIGICIGGGYDMTVE---GCT--VEMKFGTAYFCEPREDHGAINRSEKESKSINIFFP 220 (243)
T ss_dssp EEEECCSSEEEEEECSSCEEEEET---TEE--EEECTTCEEEECTTCCEEEEECSSSCEEEEEEEES
T ss_pred CCCEeCCCcEEEEEEECEEEEEEC---CEE--EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcC
Confidence 568999999999999999999884 444 56999999999999999999877777888888874
No 52
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.37 E-value=2.1e-06 Score=83.06 Aligned_cols=71 Identities=15% Similarity=0.305 Sum_probs=57.5
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCC-CcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC-CCCe
Q 025302 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG-DPVW 165 (255)
Q Consensus 94 F~~EH~H~d-dEIryIleGsG~Fdvrd~d-d~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~-~~gW 165 (255)
....|+|.. +|+.||++|++.+.+.+.+ .+++...+++||+++||+|..|+...+ +..+..+-|++. .++-
T Consensus 350 ~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng-~~~l~~l~f~~s~~p~~ 423 (476)
T 1fxz_A 350 MFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQ-SDNFEYVSFKTNDTPMI 423 (476)
T ss_dssp EEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-STTEEEEEEESSSSCCE
T ss_pred eecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeC-CCCEEEEEEECCCCCce
Confidence 478999995 8999999999999998654 356677799999999999999999885 566777777733 3443
No 53
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.37 E-value=7.7e-07 Score=80.55 Aligned_cols=72 Identities=13% Similarity=0.271 Sum_probs=57.4
Q ss_pred eEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEE
Q 025302 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (255)
Q Consensus 75 DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vk 154 (255)
-++++.|+.. +---|+|..+|..||++|+|.|.+ +++| +.+++||+|.+|+|..|+|..+.+..++
T Consensus 189 ~~~t~~PG~~---------~p~~e~H~~eh~~~vL~G~g~y~l---~~~~--~~V~~GD~i~~~~~~~h~~~n~G~e~~~ 254 (266)
T 4e2q_A 189 HTMDFQPGEF---------LNVKEVHYNQHGLLLLEGQGIYRL---GDNW--YPVQAGDVIWMAPFVPQWYAALGKTRSR 254 (266)
T ss_dssp EEEEECTTCB---------CSSCCCCSCCEEEEEEECEEEEEE---TTEE--EEEETTCEEEECTTCCEEEEEESSSCEE
T ss_pred EEEEECCCcC---------cCCceEcccceEEEEEeceEEEEE---CCEE--EEecCCCEEEECCCCcEEEEeCCCCCEE
Confidence 4666776641 122589999999999999999987 4677 5699999999999999999887777777
Q ss_pred EEEEecC
Q 025302 155 AMRLFVG 161 (255)
Q Consensus 155 AiRlF~~ 161 (255)
.+ ++++
T Consensus 255 yl-~ykd 260 (266)
T 4e2q_A 255 YL-LYKD 260 (266)
T ss_dssp EE-EEEE
T ss_pred EE-EEcc
Confidence 66 6665
No 54
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.36 E-value=1.4e-06 Score=84.67 Aligned_cols=72 Identities=13% Similarity=0.211 Sum_probs=57.8
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCC-CcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC-CCCee
Q 025302 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG-DPVWT 166 (255)
Q Consensus 94 F~~EH~H~d-dEIryIleGsG~Fdvrd~d-d~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~-~~gWv 166 (255)
....|+|+. +|+.||++|++.+.+.+.+ .+++...+++||+++||+|..|+...++ ..+..+-+|+. .++-.
T Consensus 379 ~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~~-e~~~~l~~~ts~~p~~~ 453 (493)
T 2d5f_A 379 IYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGE-QGLEYVVFKTHHNAVSS 453 (493)
T ss_dssp EEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEE-EEEEEEEEESSTTCCEE
T ss_pred eeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeCC-CCEEEEEEECCCCCcce
Confidence 378999995 8999999999999998764 4566678999999999999999987654 55777777754 34433
No 55
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.34 E-value=1.3e-06 Score=82.92 Aligned_cols=77 Identities=12% Similarity=0.178 Sum_probs=61.7
Q ss_pred eeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeC-CCC
Q 025302 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD-TDN 151 (255)
Q Consensus 73 ~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~-~~~ 151 (255)
..-.+++.|+. +...|.|..+|+.||++|+|.+.+-+. +.-....+++||++++|+|+.||+... .+.
T Consensus 50 s~~~~~l~PGg----------~~~pHh~~a~E~~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e 118 (416)
T 1uij_A 50 RIVQFQSKPNT----------ILLPHHADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQ 118 (416)
T ss_dssp EEEEEEECTTE----------EEEEEEESEEEEEEEEESCEEEEEECS-SCEEEEEECTTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEeccCc----------CcccccCCCceEEEEEeeEEEEEEEEC-CCCeEEEecCCCEEEECCCCeEEEEecCCCC
Confidence 45678888875 467894556999999999999998654 334467899999999999999999876 467
Q ss_pred cEEEEEEec
Q 025302 152 YIKAMRLFV 160 (255)
Q Consensus 152 ~vkAiRlF~ 160 (255)
.++++-++.
T Consensus 119 ~l~~l~~~~ 127 (416)
T 1uij_A 119 NLKMIWLAI 127 (416)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEec
Confidence 788887774
No 56
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.34 E-value=1.5e-06 Score=83.06 Aligned_cols=77 Identities=10% Similarity=0.179 Sum_probs=60.6
Q ss_pred eeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC-CC
Q 025302 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DN 151 (255)
Q Consensus 73 ~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~-~~ 151 (255)
..-.+++.|.. +...|.|..+|++||++|+|.+.+-+. +.-....+++||++++|+|+.||+.... +.
T Consensus 62 s~~~~~l~PGg----------~~~pHh~~a~Ei~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e 130 (434)
T 2ea7_A 62 RVVEFKSKPNT----------LLLPHHADADFLLVVLNGTAVLTLVNP-DSRDSYILEQGHAQKIPAGTTFFLVNPDDNE 130 (434)
T ss_dssp EEEEEEECTTE----------EEEEEEESEEEEEEEEESEEEEEEECS-SCEEEEEEETTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEecCCc----------CccCccCCCceEEEEEecEEEEEEEeC-CCCEEEEeCCCCEEEECCCccEEEEeCCCCC
Confidence 44677888875 467894455999999999999999753 3345678999999999999999997765 56
Q ss_pred cEEEEEEec
Q 025302 152 YIKAMRLFV 160 (255)
Q Consensus 152 ~vkAiRlF~ 160 (255)
.+.++-+|.
T Consensus 131 ~l~~l~~~~ 139 (434)
T 2ea7_A 131 NLRIIKLAI 139 (434)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEEec
Confidence 677777763
No 57
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.34 E-value=4.9e-07 Score=76.48 Aligned_cols=58 Identities=16% Similarity=0.178 Sum_probs=47.1
Q ss_pred ccccccCc-ceEEEEEe--ceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 95 FEEHLHTD-EEIRYCVA--GSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 95 ~~EH~H~d-dEIryIle--GsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
..+|.|.. +|++||++ |+|.|.+. |++ +.+++||.|+||+|+.|++. + .++.+-++..
T Consensus 58 ~~~H~H~~~~E~~yVLe~~G~g~v~id---ge~--~~l~~GD~v~IPpg~~H~i~-g---~l~~L~I~~P 118 (157)
T 4h7l_A 58 ARTHYHREHQEIYVVLDHAAHATIELN---GQS--YPLTKLLAISIPPLVRHRIV-G---EATIINIVSP 118 (157)
T ss_dssp CCCBBCSSCEEEEEEEEECTTCEEEET---TEE--EECCTTEEEEECTTCCEEEE-S---CEEEEEEEES
T ss_pred ccceECCCCcEEEEEEecCcEEEEEEC---CEE--EEeCCCCEEEECCCCeEeeE-C---CEEEEEEECC
Confidence 46899975 89999999 99999984 554 67999999999999999996 2 4666655553
No 58
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.33 E-value=2.3e-06 Score=83.69 Aligned_cols=72 Identities=18% Similarity=0.279 Sum_probs=58.1
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCC-CcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC-CCCee
Q 025302 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG-DPVWT 166 (255)
Q Consensus 94 F~~EH~H~d-dEIryIleGsG~Fdvrd~d-d~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~-~~gWv 166 (255)
....|+|.. +|+.||++|++.+.+.+.+ .+.+...+++||+++||+|+.|+...+ +..+..+-+++. .++-+
T Consensus 384 ~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~Ng-~e~l~~l~f~~s~~p~~~ 458 (510)
T 3c3v_A 384 LFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKSQ-SDNFEYVAFKTDSRPSIA 458 (510)
T ss_dssp EEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSSSCCEE
T ss_pred eecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEeC-CCCEEEEEEECCCCccee
Confidence 478999995 8999999999999998765 356667799999999999999999884 566777777743 34433
No 59
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.31 E-value=1.1e-06 Score=84.91 Aligned_cols=80 Identities=15% Similarity=0.230 Sum_probs=64.7
Q ss_pred CCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCc----------------------EEEE
Q 025302 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK----------------------WIRI 127 (255)
Q Consensus 70 GY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~----------------------wirI 127 (255)
|+. .-.++|.|.. +...|.|+.+|+.||++|+|++.+-+.+.. ....
T Consensus 47 gvs-~~r~~l~Pgg----------l~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~ 115 (476)
T 1fxz_A 47 GVA-LSRCTLNRNA----------LRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIY 115 (476)
T ss_dssp TCE-EEEEEECTTE----------EEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEE
T ss_pred ceE-EEEEEEcCCC----------EecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEE
Confidence 764 4456788765 577999999999999999999999864321 0125
Q ss_pred EEecCCEEEeCCCCcccceeCCCCcEEEEEEec
Q 025302 128 WVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (255)
Q Consensus 128 ~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~ 160 (255)
.+++||+|.+|+|+.||+..+.+..+.++-+|.
T Consensus 116 ~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d 148 (476)
T 1fxz_A 116 NFREGDLIAVPTGVAWWMYNNEDTPVVAVSIID 148 (476)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEEC
T ss_pred EEeCCCEEEECCCCcEEEEeCCCCCEEEEEEec
Confidence 699999999999999999887777888888885
No 60
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.30 E-value=7.9e-06 Score=64.02 Aligned_cols=49 Identities=12% Similarity=0.292 Sum_probs=43.1
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC
Q 025302 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (255)
Q Consensus 96 ~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~ 149 (255)
..|.|++-|+.||++|+|.+.+. ++ ...+++||++++|+|+.|.+...+
T Consensus 32 ~p~~h~~~~i~~v~~G~~~~~i~---~~--~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 32 RPLGMKGYILNLTIRGQGVVKNQ---GR--EFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp ETTCCSSEEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEEECT
T ss_pred cccCCCceEEEEEEEeEEEEEEC---CE--EEEecCCeEEEEcCCCCEEEEeCC
Confidence 47999999999999999999984 44 467999999999999999988755
No 61
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.29 E-value=1.5e-06 Score=84.32 Aligned_cols=81 Identities=19% Similarity=0.213 Sum_probs=64.9
Q ss_pred CCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCC-CcEE-----------------------
Q 025302 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRN-EKWI----------------------- 125 (255)
Q Consensus 70 GY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~d-d~wi----------------------- 125 (255)
|+.. =.++|.|.. +...|.|..+|+.||++|+|++.+-..+ .+.+
T Consensus 49 gvs~-~R~~i~P~g----------l~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~ 117 (465)
T 3qac_A 49 GVSV-IRRTIEPHG----------LLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKF 117 (465)
T ss_dssp TCEE-EEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEEECTTCCCCC-----------------------
T ss_pred ceEE-EEEEEcCCc----------CcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccccccccccc
Confidence 7644 456778775 5789999889999999999999987442 1211
Q ss_pred -------------EEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 126 -------------RIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 126 -------------rI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
...+++||+|.+|+|+.||+..+.+..+.++-+|..
T Consensus 118 ~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~ 166 (465)
T 3qac_A 118 GMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDT 166 (465)
T ss_dssp -------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECT
T ss_pred ccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcC
Confidence 246899999999999999998888888999988865
No 62
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.29 E-value=1.8e-06 Score=79.36 Aligned_cols=63 Identities=22% Similarity=0.294 Sum_probs=49.9
Q ss_pred ccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEec
Q 025302 97 EHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (255)
Q Consensus 97 EH~H~-ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~ 160 (255)
.|.|. .+|++||++|++.+.+.+.++..-...+++||.+.+|+|+.|+|....+.. +.+-++.
T Consensus 65 ~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~ 128 (350)
T 1juh_A 65 PHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIV 128 (350)
T ss_dssp CEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEE
T ss_pred cccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEc
Confidence 79998 799999999999999986444333578999999999999999998755443 5554443
No 63
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.28 E-value=5e-07 Score=80.06 Aligned_cols=65 Identities=17% Similarity=0.114 Sum_probs=49.9
Q ss_pred ccccccC-cceEEEEEeceEEEEE--------EeC-------CCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEE-EE
Q 025302 95 FEEHLHT-DEEIRYCVAGSGYFDV--------RDR-------NEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKA-MR 157 (255)
Q Consensus 95 ~~EH~H~-ddEIryIleGsG~Fdv--------rd~-------dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkA-iR 157 (255)
...|.|. .+|++||++|++.+.+ .+. +++...+.+++||++.+|+|+.|.|...++...+. +-
T Consensus 56 ~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~ 135 (239)
T 2xlg_A 56 PMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFV 135 (239)
T ss_dssp CCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEE
T ss_pred CCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 4689999 5999999999999998 322 11233578999999999999999998765554665 44
Q ss_pred Ee
Q 025302 158 LF 159 (255)
Q Consensus 158 lF 159 (255)
++
T Consensus 136 ~~ 137 (239)
T 2xlg_A 136 WM 137 (239)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 64
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.27 E-value=1.4e-06 Score=77.08 Aligned_cols=61 Identities=26% Similarity=0.487 Sum_probs=50.9
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 95 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 95 ~~EH~H~-ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
..+|.|. .+|+.||++|++.+.+. +++ +.+++||.+.+|+|+.|++....+ ..+.+-+|..
T Consensus 231 ~~~h~H~~~~e~~~vl~G~~~~~i~---~~~--~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 231 IVDHYHEYHTETFYCLEGQMTMWTD---GQE--IQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp CCCEECSSCEEEEEEEESCEEEEET---TEE--EEECTTCEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred CCCcCCCCCcEEEEEEeCEEEEEEC---CEE--EEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 4579999 59999999999999884 454 679999999999999999988766 6777766644
No 65
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.26 E-value=6.7e-07 Score=71.64 Aligned_cols=65 Identities=18% Similarity=0.214 Sum_probs=50.4
Q ss_pred CCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC
Q 025302 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (255)
Q Consensus 70 GY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~ 149 (255)
|-...-+..+.|.. +.+|.|..+|..||++|++.+.++ +++ .+.+++||.+++|+|..|++...+
T Consensus 47 g~~~~g~w~~~pG~-----------~~~~~~~~~E~~~Vl~G~~~l~~~--~g~--~~~l~~GD~~~ip~g~~h~~~~~~ 111 (123)
T 3bcw_A 47 GKVESGVWESTSGS-----------FQSNTTGYIEYCHIIEGEARLVDP--DGT--VHAVKAGDAFIMPEGYTGRWEVDR 111 (123)
T ss_dssp TTEEEEEEEEEEEE-----------EECCCTTEEEEEEEEEEEEEEECT--TCC--EEEEETTCEEEECTTCCCEEEEEE
T ss_pred CCEEEEEEEECCCc-----------eeeEcCCCcEEEEEEEEEEEEEEC--CCe--EEEECCCCEEEECCCCeEEEEECC
Confidence 44555666666553 457888669999999999998874 344 367999999999999999997643
No 66
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.26 E-value=3.8e-06 Score=73.33 Aligned_cols=73 Identities=19% Similarity=0.309 Sum_probs=55.8
Q ss_pred eeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcE
Q 025302 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (255)
Q Consensus 74 ~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~v 153 (255)
.-++++.|+. ..-..|+|..+|..||++|++.|.+ +++|+ .+++||.+.+++|..|+|....+..+
T Consensus 167 ~~~~tl~PG~---------~~~~~~~h~~ee~~~vLeG~~~~~~---~~~~~--~l~~GD~~~~~~~~pH~~~n~g~~~~ 232 (246)
T 1sfn_A 167 VSTMSFAPGA---------SLPYAEVHYMEHGLLMLEGEGLYKL---EENYY--PVTAGDIIWMGAHCPQWYGALGRNWS 232 (246)
T ss_dssp EEEEEECTTC---------BCSSCBCCSSCEEEEEEECEEEEEE---TTEEE--EEETTCEEEECTTCCEEEEEESSSCE
T ss_pred EEEEEECCCC---------ccCcccCCCceEEEEEEECEEEEEE---CCEEE--EcCCCCEEEECCCCCEEEEcCCCCCE
Confidence 4566777764 1122367999999999999999988 46774 69999999999999999987666556
Q ss_pred EEEEEecC
Q 025302 154 KAMRLFVG 161 (255)
Q Consensus 154 kAiRlF~~ 161 (255)
+.+ ++|+
T Consensus 233 ~yl-~~kd 239 (246)
T 1sfn_A 233 KYL-LYKD 239 (246)
T ss_dssp EEE-EEEE
T ss_pred EEE-EEEe
Confidence 544 5554
No 67
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.26 E-value=1.8e-06 Score=83.32 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=63.8
Q ss_pred CCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCc-EE--------------------EEE
Q 025302 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WI--------------------RIW 128 (255)
Q Consensus 70 GY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~-wi--------------------rI~ 128 (255)
|. ..-.++|.|.. +...|.|..+|+.||++|+|++.+-+.+.. .+ ...
T Consensus 62 gv-s~~r~~i~pgg----------l~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~ 130 (459)
T 2e9q_A 62 GV-NMIRHTIRPKG----------LLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRP 130 (459)
T ss_dssp TE-EEEEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEE
T ss_pred ce-EEEEEEEcCCC----------EecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEE
Confidence 55 34457788775 567999999999999999999999644321 11 246
Q ss_pred EecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 129 VKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 129 ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
+++||+|++|+|+.||+..+.+..+.++-+|..
T Consensus 131 l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~ 163 (459)
T 2e9q_A 131 FREGDLLVVPAGVSHWMYNRGQSDLVLIVFADT 163 (459)
T ss_dssp EETTEEEEECTTCCEEEEECSSSCEEEEEEEES
T ss_pred ecCCCEEEECCCCCEEEEeCCCCCEEEEEEecC
Confidence 999999999999999998877778888888754
No 68
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.25 E-value=2.4e-06 Score=83.08 Aligned_cols=79 Identities=15% Similarity=0.143 Sum_probs=64.5
Q ss_pred cCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCC------------------C--------
Q 025302 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRN------------------E-------- 122 (255)
Q Consensus 69 rGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~d------------------d-------- 122 (255)
.|| ..-.++|.|.. +...|.|+.+|+.||++|+|++.+-..+ .
T Consensus 43 ~gv-~~~r~~i~pgg----------l~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~ 111 (493)
T 2d5f_A 43 AGV-TVSKRTLNRNG----------LHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSH 111 (493)
T ss_dssp HTC-EEEEEEECTTE----------EEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEE
T ss_pred CCE-EEEEEEeCCCc----------EeCceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 465 45668888876 4679999999999999999999987432 1
Q ss_pred -cEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEec
Q 025302 123 -KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (255)
Q Consensus 123 -~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~ 160 (255)
++ ..+++||+|++|||+.||+..+.+..+.++-+|.
T Consensus 112 qkv--~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d 148 (493)
T 2d5f_A 112 QKI--RHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLD 148 (493)
T ss_dssp SCE--EEEETTEEEEECTTCCEEEEECSSSCEEEEEEEC
T ss_pred ceE--EEecCCCEEEECCCCcEEEEeCCCCCEEEEEEec
Confidence 23 3799999999999999999888777888888875
No 69
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.23 E-value=1.5e-06 Score=72.71 Aligned_cols=64 Identities=19% Similarity=0.448 Sum_probs=45.6
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCCCCeee
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 167 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~~gWva 167 (255)
+.+| |+.||+.||++|++.+.+ +|+ .+.+++||.+.+|+|+.|+|... ...+.+-+ ..+++|..
T Consensus 78 ~~~~-~~~eE~~yVLeG~~~l~i---~g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V-~~P~~~~~ 141 (151)
T 4axo_A 78 FDWT-LNYDEIDYVIDGTLDIII---DGR--KVSASSGELIFIPKGSKIQFSVP--DYARFIYV-TYPADWAS 141 (151)
T ss_dssp EEEE-CSSEEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEE-EECSCC--
T ss_pred ccEe-CCCcEEEEEEEeEEEEEE---CCE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEE-ECCCCccc
Confidence 3444 567999999999999887 344 47799999999999999999875 23443333 23455554
No 70
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.23 E-value=2.4e-06 Score=83.65 Aligned_cols=82 Identities=16% Similarity=0.171 Sum_probs=65.4
Q ss_pred cCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCc-------------------------
Q 025302 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK------------------------- 123 (255)
Q Consensus 69 rGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~------------------------- 123 (255)
.|+. .=.++|.|.. +...|.|..+|+.||++|+|++.+-+.+..
T Consensus 46 ~gvs-~~r~~i~p~g----------l~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~ 114 (510)
T 3c3v_A 46 AGVA-LSRLVLRRNA----------LRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEE 114 (510)
T ss_dssp HTCE-EEEEEECTTE----------EEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC----------------
T ss_pred CcEE-EEEEEECCCC----------CccceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 3764 4567788775 578999999999999999999999864320
Q ss_pred --E--------EEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 124 --W--------IRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 124 --w--------irI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
. ....+++||+|.+|||+.||+..+.+..+.++-+|..
T Consensus 115 ~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~ 162 (510)
T 3c3v_A 115 DQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDT 162 (510)
T ss_dssp ----CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECT
T ss_pred ccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCC
Confidence 0 0146999999999999999998877778888888844
No 71
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.23 E-value=3.6e-06 Score=79.82 Aligned_cols=78 Identities=12% Similarity=0.142 Sum_probs=64.6
Q ss_pred eeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCE------EEeCCCCcccce
Q 025302 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGM------IVLPAGCYHRFT 146 (255)
Q Consensus 73 ~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDL------IvVPAGt~HrFt 146 (255)
..-.+++.|.. +...|.|..+|+.||++|+|+..+-+.+++. ...+++||+ +++|+|+.||+.
T Consensus 53 s~~~~~l~pgg----------~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~-~~~l~~GDv~~~~~~~~iP~G~~h~~~ 121 (397)
T 2phl_A 53 RLVEFRSKPET----------LLLPQQADAELLLVVRSGSAILVLVKPDDRR-EYFFLTSDNPIFSDHQKIPAGTIFYLV 121 (397)
T ss_dssp EEEEEEECSSE----------EEEEEEESEEEEEEEEESEEEEEEEETTTEE-EEEEEESSCTTSCSEEEECTTCEEEEE
T ss_pred EEEEEEECCCc----------CccCEecCCCeEEEEEeeeEEEEEEeCCCcE-EEEECCCCcccccceEEECCCCcEEEE
Confidence 45677888875 4578889889999999999999998776664 578999999 999999999996
Q ss_pred eCC-CCcEEEEEEecC
Q 025302 147 LDT-DNYIKAMRLFVG 161 (255)
Q Consensus 147 l~~-~~~vkAiRlF~~ 161 (255)
... +..+.++.+|..
T Consensus 122 N~g~~~~l~~i~~~~~ 137 (397)
T 2phl_A 122 NPDPKEDLRIIQLAMP 137 (397)
T ss_dssp ECCSSCCEEEEEEEEE
T ss_pred eCCCCCCeEEEEeecC
Confidence 554 667888888853
No 72
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.22 E-value=2.2e-06 Score=75.83 Aligned_cols=60 Identities=17% Similarity=0.302 Sum_probs=49.0
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEec
Q 025302 95 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (255)
Q Consensus 95 ~~EH~H~-ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~ 160 (255)
...|.|. .+|++||++|++.+.+. ++. ..+++||++.+|+|+.|.+....++ .+.+-+|.
T Consensus 59 ~~~h~H~~~~e~~~Vl~G~~~~~~~---~~~--~~l~~Gd~~~~p~~~~H~~~n~~~~-~~~~~~~~ 119 (337)
T 1y3t_A 59 FPLHVHKDTHEGILVLDGKLELTLD---GER--YLLISGDYANIPAGTPHSYRMQSHR-TRLVSYTM 119 (337)
T ss_dssp EEEEECTTCCEEEEEEESCEEEEET---TEE--EEECTTCEEEECTTCCEEEEECSTT-EEEEEEEE
T ss_pred CCceeCCCceEEEEEEECEEEEEEC---CEE--EEECCCCEEEECCCCcEEEEECCCC-eEEEEEEC
Confidence 5679999 79999999999999884 443 6799999999999999999876553 55555543
No 73
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.22 E-value=1e-06 Score=83.10 Aligned_cols=57 Identities=28% Similarity=0.542 Sum_probs=47.9
Q ss_pred ccccccCcceEEEEEeceEE-EEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEE
Q 025302 95 FEEHLHTDEEIRYCVAGSGY-FDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 156 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~-Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAi 156 (255)
...|.|..+|++||++|+|. +.+ ||+ ++.+++||+|++|+|..|.+..+.+..+..+
T Consensus 116 ~~~HrH~~~ev~~VleG~G~~~~v---dG~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l 173 (368)
T 3nw4_A 116 APEHRHSQNAFRFVVEGEGVWTVV---NGD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWI 173 (368)
T ss_dssp EEEEEESSCEEEECSSCEEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred cCceecccceEEEEEecceEEEEE---CCE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEE
Confidence 67899999999999999994 555 344 6889999999999999999988776666654
No 74
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.19 E-value=6.9e-06 Score=80.89 Aligned_cols=72 Identities=11% Similarity=0.229 Sum_probs=56.2
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEec-CCCCee
Q 025302 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV-GDPVWT 166 (255)
Q Consensus 94 F~~EH~H~d-dEIryIleGsG~Fdvrd~dd-~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~-~~~gWv 166 (255)
....|+|+. +|+.||++|++++.+-+.++ +++...+++||+++||+|+.|....+ ++.+..+-|.+ ..++-.
T Consensus 406 m~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~ag-~e~l~flaF~ss~np~~~ 480 (531)
T 3fz3_A 406 IYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAG-NQGFEYFAFKTEENAFIN 480 (531)
T ss_dssp EEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEESSTTCCEE
T ss_pred cccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEecC-CCCEEEEEEecCCCCcce
Confidence 478999997 89999999999999987654 57788999999999999999976655 44555554444 344433
No 75
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.19 E-value=2e-06 Score=79.57 Aligned_cols=59 Identities=24% Similarity=0.374 Sum_probs=48.6
Q ss_pred ccccccCcceEEEEEeceEEE-EEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEE
Q 025302 95 FEEHLHTDEEIRYCVAGSGYF-DVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~F-dvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRl 158 (255)
...|.|..+|++||++|+|.| .+ +++ ++.+++||+|++|+|+.|++....+..+..+-+
T Consensus 113 ~~~H~H~~~e~~yVl~G~g~~t~v---~g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v 172 (354)
T 2d40_A 113 APSHRHNQSALRFIVEGKGAFTAV---DGE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDG 172 (354)
T ss_dssp EEEEEESSCEEEEEEECSSCEEEE---TTE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred cCCeecCcceEEEEEEEEEEEEEE---CCE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 568999999999999999988 55 344 477999999999999999998766555665544
No 76
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.19 E-value=3.7e-06 Score=73.47 Aligned_cols=57 Identities=21% Similarity=0.243 Sum_probs=45.1
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCC-CcEEEE
Q 025302 95 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD-NYIKAM 156 (255)
Q Consensus 95 ~~EH~H~-ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~-~~vkAi 156 (255)
..+|.|. .+|+.||++|++.+.+. +++ +.+++||.|.+|+|+.|++....+ ..++.+
T Consensus 192 ~~~h~H~~~~E~~~Vl~G~~~~~i~---~~~--~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 192 HGYIETHVQEHGAYILSGQGVYNLD---NNW--IPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp BEEEEEESSCEEEEEEESEEEEESS---SCE--EEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred cCcccCCCceEEEEEEEeEEEEEEC---CEE--EEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 4578885 68999999999999874 555 579999999999999999987665 556655
No 77
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.13 E-value=3.4e-06 Score=80.02 Aligned_cols=59 Identities=22% Similarity=0.248 Sum_probs=47.9
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC-CCcEEEEEE
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKAMRL 158 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~-~~~vkAiRl 158 (255)
-..|.|..+|++||++|+|++.+. ++ ++.+++||+|++|+|..|.+..++ +.....+.+
T Consensus 307 ~~~HrH~~~~v~~VleG~G~~~V~---ge--~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i 366 (394)
T 3bu7_A 307 TKAHRHTGNVIYNVAKGQGYSIVG---GK--RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSF 366 (394)
T ss_dssp CCCEEESSCEEEEEEECCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEE
T ss_pred CCCcccCCcEEEEEEeCeEEEEEC---CE--EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEe
Confidence 567999999999999999988873 44 578999999999999999997754 344444433
No 78
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.10 E-value=5.4e-06 Score=76.23 Aligned_cols=58 Identities=10% Similarity=0.135 Sum_probs=47.4
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEE
Q 025302 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 156 (255)
Q Consensus 94 F~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAi 156 (255)
...+|+|+.||++||++|++.+.+.+. + +..+++||.|+||||+.|.|...+. +.+.+
T Consensus 264 ~~~~h~~~~~~~~~vleG~~~i~i~g~--~--~~~l~~Gd~~~iPag~~h~~~~~~~-~~~~l 321 (350)
T 1juh_A 264 TVPTWSFPGACAFQVQEGRVVVQIGDY--A--ATELGSGDVAFIPGGVEFKYYSEAY-FSKVL 321 (350)
T ss_dssp CCCCBCCSSCEEEEEEESCEEEEETTS--C--CEEECTTCEEEECTTCCEEEEESSS-SEEEE
T ss_pred CCCcccCCCcEEEEEEeeEEEEEECCe--E--EEEeCCCCEEEECCCCCEEEEecCC-eEEEE
Confidence 466899999999999999999999531 3 3679999999999999999998643 44433
No 79
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.09 E-value=7.1e-06 Score=80.08 Aligned_cols=82 Identities=16% Similarity=0.186 Sum_probs=63.4
Q ss_pred cCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCC-CcEE--------------------EE
Q 025302 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRN-EKWI--------------------RI 127 (255)
Q Consensus 69 rGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~d-d~wi--------------------rI 127 (255)
.|. ..=.++|.|.+ +...|.|.-.|+.||++|+|++.+-..+ .+.+ .-
T Consensus 44 ~gv-s~~R~~i~pgg----------l~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~ 112 (496)
T 3ksc_A 44 AGV-ALSRATLQRNA----------LRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVN 112 (496)
T ss_dssp HTC-EEEEEEECTTE----------EEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEE
T ss_pred CCc-eEEEEEecCCC----------EeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheee
Confidence 465 34566777765 5789999779999999999999996543 2221 12
Q ss_pred EEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 128 WVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 128 ~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
.+++||+|+||+|+.||...+.+..+.++-+|..
T Consensus 113 ~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~ 146 (496)
T 3ksc_A 113 RFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDI 146 (496)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEECT
T ss_pred ccCCCCEEEECCCCcEEEEcCCCCCEEEEEEecc
Confidence 7899999999999999998877777888887743
No 80
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.09 E-value=2.8e-06 Score=68.49 Aligned_cols=47 Identities=19% Similarity=0.273 Sum_probs=38.8
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeC
Q 025302 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (255)
Q Consensus 96 ~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~ 148 (255)
.+|. ..+|+.||++|++.+.+. ++ .+.+++||.|.+|+|+.|++...
T Consensus 70 ~~h~-~~~E~~~VLeG~~~l~~~---g~--~~~l~~GD~i~~p~g~~h~~~~~ 116 (133)
T 2pyt_A 70 PWTL-NYDEIDMVLEGELHVRHE---GE--TMIAKAGDVMFIPKGSSIEFGTP 116 (133)
T ss_dssp EEEC-SSEEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCEEEEEEE
T ss_pred cccC-CCCEEEEEEECEEEEEEC---CE--EEEECCCcEEEECCCCEEEEEeC
Confidence 3443 479999999999998884 44 36799999999999999999753
No 81
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.07 E-value=5.9e-06 Score=71.60 Aligned_cols=57 Identities=23% Similarity=0.230 Sum_probs=46.6
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEE-EeCCCCcccceeCCCCcEEEE
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI-VLPAGCYHRFTLDTDNYIKAM 156 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLI-vVPAGt~HrFtl~~~~~vkAi 156 (255)
..+|.|+.+|+.||++|++.+.+. ++ ...+++||.| ++|+|+.|++....+.....+
T Consensus 47 ~~~H~H~~~e~~~Vl~G~~~~~~~---~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l 104 (243)
T 3h7j_A 47 VEPHQHKEVQIGMVVSGELMMTVG---DV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAI 104 (243)
T ss_dssp EEEECCSSEEEEEEEESEEEEEET---TE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred cCCEECCCcEEEEEEEeEEEEEEC---CE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEE
Confidence 578999999999999999999883 44 3679999999 599999999987665444433
No 82
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.06 E-value=6.1e-06 Score=70.02 Aligned_cols=54 Identities=13% Similarity=0.007 Sum_probs=44.8
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEE
Q 025302 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (255)
Q Consensus 96 ~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vk 154 (255)
.+|.|..+|++||++|+..+.+. ++ ...+++||.+.+|+|..|+|....+...+
T Consensus 104 ~~~~h~gEE~~yVLeG~v~vtl~---g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Ar 157 (166)
T 2vpv_A 104 LSNSFRTYITFHVIQGIVEVTVC---KN--KFLSVKGSTFQIPAFNEYAIANRGNDEAK 157 (166)
T ss_dssp EEECCSEEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCEEEEEECSSSCEE
T ss_pred CccCCCceEEEEEEEeEEEEEEC---CE--EEEEcCCCEEEECCCCCEEEEECCCCCEE
Confidence 34778889999999999999995 44 46799999999999999999876664433
No 83
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.06 E-value=6.7e-06 Score=73.44 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=45.9
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEE
Q 025302 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 156 (255)
Q Consensus 96 ~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAi 156 (255)
.+|.|..+|+.||++|++.+.+. |+ ...+++||.|.+|+|+.|++....+...+.+
T Consensus 84 ~~h~H~~eE~~~Vl~G~l~v~v~---g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l 139 (278)
T 1sq4_A 84 PEQDPNAEAVLFVVEGELSLTLQ---GQ--VHAMQPGGYAFIPPGADYKVRNTTGQHTRFH 139 (278)
T ss_dssp CCCCTTEEEEEEEEESCEEEEES---SC--EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CCcCCCceEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 46889999999999999999885 34 3679999999999999999987655444433
No 84
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.05 E-value=2.1e-05 Score=74.66 Aligned_cols=67 Identities=12% Similarity=0.174 Sum_probs=55.1
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCC--------------cEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEE
Q 025302 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNE--------------KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (255)
Q Consensus 94 F~~EH~H~d-dEIryIleGsG~Fdvrd~dd--------------~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRl 158 (255)
....|.|+. .|+.||++|+|++.+-+.++ +.+.-.+++||+++||+|..|+-..+ ..+..+-+
T Consensus 261 ~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f 338 (416)
T 1uij_A 261 LLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAF 338 (416)
T ss_dssp EEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEE
T ss_pred EecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEE
Confidence 478999996 89999999999999987654 35555899999999999999998777 34777777
Q ss_pred ecCC
Q 025302 159 FVGD 162 (255)
Q Consensus 159 F~~~ 162 (255)
|+..
T Consensus 339 ~~~~ 342 (416)
T 1uij_A 339 GINA 342 (416)
T ss_dssp EETC
T ss_pred EcCC
Confidence 7553
No 85
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.04 E-value=2.2e-05 Score=74.44 Aligned_cols=68 Identities=15% Similarity=0.143 Sum_probs=57.1
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeC------CC-cEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCC
Q 025302 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDR------NE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 93 kF~~EH~H~d-dEIryIleGsG~Fdvrd~------dd-~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~ 162 (255)
.....|.|.. .|+.||++|+|++.+-+. ++ +.+...+++||+++||+|..|+-...+ .+..+-|+...
T Consensus 250 ~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s 325 (397)
T 2phl_A 250 ALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINA 325 (397)
T ss_dssp EEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESC
T ss_pred cEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCC
Confidence 3478899996 899999999999999876 33 688899999999999999999987764 47767776654
No 86
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.04 E-value=9.8e-06 Score=76.88 Aligned_cols=58 Identities=16% Similarity=0.398 Sum_probs=48.1
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCccccee-CCCCcEEEE
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL-DTDNYIKAM 156 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl-~~~~~vkAi 156 (255)
...|.|..+|++||++|+|.|..- +++ ++.+++||+|++|+|..|.... +.+..+..+
T Consensus 136 ~~~HrH~~~ev~~IleG~G~~t~v--~G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 136 AGAHRHAASALRFIMEGSGAYTIV--DGH--KVELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp CCCEEESSCEEEEEEECSCEEEEE--TTE--EEEECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred cCCccCCcceEEEEEEeeEEEEEE--CCE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 678999999999999999977332 354 5789999999999999999988 666656655
No 87
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.02 E-value=3.5e-05 Score=75.22 Aligned_cols=84 Identities=15% Similarity=0.176 Sum_probs=65.3
Q ss_pred EECCCCCCChHHH----------hhccccccccCc-ceEEEEEeceEEEEEEeCC-CcEEEEEEecCCEEEeCCCCcccc
Q 025302 78 EVCPEKLPNYEEK----------IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYHRF 145 (255)
Q Consensus 78 tlsp~~~Pn~e~k----------~~kF~~EH~H~d-dEIryIleGsG~Fdvrd~d-d~wirI~ve~GDLIvVPAGt~HrF 145 (255)
.++...+|.+..+ -......|+|+. .|+.||++|+++..+-+.+ .+++.-.+++||+++||+|..|.-
T Consensus 344 ~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~ 423 (496)
T 3ksc_A 344 TVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAA 423 (496)
T ss_dssp EECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEE
T ss_pred EeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEEE
Confidence 4555667766654 124588999987 7999999999999998765 356677799999999999999965
Q ss_pred eeCCCCcEEEEEEecCC
Q 025302 146 TLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 146 tl~~~~~vkAiRlF~~~ 162 (255)
..+ +..+..+-+|+..
T Consensus 424 ~a~-~e~~~~l~f~~s~ 439 (496)
T 3ksc_A 424 KSL-SDRFSYVAFKTND 439 (496)
T ss_dssp EEC-SSEEEEEEEESST
T ss_pred EeC-CCCEEEEEEECCC
Confidence 555 5568888888653
No 88
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.02 E-value=1.4e-05 Score=71.40 Aligned_cols=68 Identities=18% Similarity=0.280 Sum_probs=53.0
Q ss_pred eEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEE
Q 025302 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (255)
Q Consensus 75 DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vk 154 (255)
-++++.|+. ..-..|.|..+|..||++|+|.|.+ +++| +.+++||.|.+++|..|+|....+..++
T Consensus 194 ~~~~l~pG~---------~i~~~~~h~~e~~~~il~G~~~~~~---~~~~--~~v~~GD~~~~~~~~~h~~~n~g~~~~~ 259 (278)
T 1sq4_A 194 NIVNFEPGG---------VIPFAETHVMEHGLYVLEGKAVYRL---NQDW--VEVEAGDFMWLRAFCPQACYSGGPGRFR 259 (278)
T ss_dssp EEEEECSSS---------EESCCCCCSEEEEEEEEECEEEEEE---TTEE--EEEETTCEEEEEESCCEEEECCSSSCEE
T ss_pred EEEEECCCC---------CcCCCCCCCccEEEEEEeCEEEEEE---CCEE--EEeCCCCEEEECCCCCEEEEcCCCCCEE
Confidence 456777764 1222456888999999999999987 4677 5699999999999999999876666566
Q ss_pred EE
Q 025302 155 AM 156 (255)
Q Consensus 155 Ai 156 (255)
.+
T Consensus 260 yl 261 (278)
T 1sq4_A 260 YL 261 (278)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 89
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.00 E-value=2.2e-05 Score=76.17 Aligned_cols=86 Identities=12% Similarity=0.160 Sum_probs=66.9
Q ss_pred EEEECCCCCCChHHHh----------hccccccccCc-ceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCcc
Q 025302 76 FCEVCPEKLPNYEEKI----------KNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYH 143 (255)
Q Consensus 76 vVtlsp~~~Pn~e~k~----------~kF~~EH~H~d-dEIryIleGsG~Fdvrd~dd-~wirI~ve~GDLIvVPAGt~H 143 (255)
+..++...+|.+..+- ......|+|+. .|+.||++|+++..+-+.++ +.+.-.+++||+++||+|..|
T Consensus 307 v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H 386 (466)
T 3kgl_A 307 ISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSV 386 (466)
T ss_dssp EEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeE
Confidence 4456666677665221 24478999987 79999999999999997754 567778999999999999999
Q ss_pred cceeCCCCcEEEEEEecCC
Q 025302 144 RFTLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 144 rFtl~~~~~vkAiRlF~~~ 162 (255)
.-.++ +..+..+-+|+..
T Consensus 387 ~~~ag-~e~~~~l~~f~s~ 404 (466)
T 3kgl_A 387 VKRAT-SEQFRWIEFKTNA 404 (466)
T ss_dssp EEEEC-SSEEEEEEEESSS
T ss_pred EEEcC-CCCEEEEEEECCC
Confidence 77555 4458888888764
No 90
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.00 E-value=2.1e-05 Score=75.79 Aligned_cols=86 Identities=13% Similarity=0.163 Sum_probs=65.2
Q ss_pred EEEECCCCCCChHHHh----------hccccccccCc-ceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCcc
Q 025302 76 FCEVCPEKLPNYEEKI----------KNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYH 143 (255)
Q Consensus 76 vVtlsp~~~Pn~e~k~----------~kF~~EH~H~d-dEIryIleGsG~Fdvrd~dd-~wirI~ve~GDLIvVPAGt~H 143 (255)
+..++...+|.+..+- ......|+|.. .|+.||++|+|+..+-+.++ +.+.-.+++||+++||+|..|
T Consensus 306 v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H 385 (459)
T 2e9q_A 306 ISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVV 385 (459)
T ss_dssp EEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEE
Confidence 4566666677655221 13478999997 79999999999999987654 455556999999999999999
Q ss_pred cceeCCCCcEEEEEEecCC
Q 025302 144 RFTLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 144 rFtl~~~~~vkAiRlF~~~ 162 (255)
+-..++ ..+..+-+|+..
T Consensus 386 ~~~ng~-~~~~~l~~~~s~ 403 (459)
T 2e9q_A 386 IKRASD-RGFEWIAFKTND 403 (459)
T ss_dssp EEEEEE-EEEEEEEEESSS
T ss_pred EEEeCC-CCeEEEEEecCC
Confidence 887753 457888788654
No 91
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=97.98 E-value=9.7e-06 Score=68.96 Aligned_cols=73 Identities=18% Similarity=0.244 Sum_probs=56.5
Q ss_pred eEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEE
Q 025302 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (255)
Q Consensus 75 DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vk 154 (255)
=++++.|+. .-..|.|..+|..||++|++.+.+.+ +++ ..+++||.+ +|+|+.|+|....+...+
T Consensus 82 ~~v~l~PG~----------~~~~H~H~~eE~~~VLeGel~l~ld~--ge~--~~L~~GDsi-~~~g~~H~~~N~g~~~ar 146 (172)
T 3es1_A 82 RVVDMLPGK----------ESPMHRTNSIDYGIVLEGEIELELDD--GAK--RTVRQGGII-VQRGTNHLWRNTTDKPCR 146 (172)
T ss_dssp EEEEECTTC----------BCCCBCCSEEEEEEEEESCEEEECGG--GCE--EEECTTCEE-EECSCCBEEECCSSSCEE
T ss_pred EEEEECCCC----------CCCCeecCceEEEEEEeCEEEEEECC--CeE--EEECCCCEE-EeCCCcEEEEeCCCCCEE
Confidence 455666664 13689999999999999999998852 343 569999999 999999999876666677
Q ss_pred EEEEecCC
Q 025302 155 AMRLFVGD 162 (255)
Q Consensus 155 AiRlF~~~ 162 (255)
.+-++...
T Consensus 147 ~l~V~~P~ 154 (172)
T 3es1_A 147 IAFILIEA 154 (172)
T ss_dssp EEEEEEEC
T ss_pred EEEEEcCC
Confidence 77666554
No 92
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=97.94 E-value=2.4e-05 Score=74.61 Aligned_cols=67 Identities=12% Similarity=0.264 Sum_probs=53.6
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCC-------------------------cEEEEEEecCCEEEeCCCCccccee
Q 025302 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-------------------------KWIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 94 F~~EH~H~d-dEIryIleGsG~Fdvrd~dd-------------------------~wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
....|+|+. .|+.||++|+|++.+-+.++ +.+.-.+++||+++||+|..||...
T Consensus 275 ~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~ 354 (418)
T 3s7i_A 275 LMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINA 354 (418)
T ss_dssp EEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEE
T ss_pred eeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEEC
Confidence 478899975 89999999999999986433 4667889999999999999999877
Q ss_pred CCCCcEEEEEEecCC
Q 025302 148 DTDNYIKAMRLFVGD 162 (255)
Q Consensus 148 ~~~~~vkAiRlF~~~ 162 (255)
++ + +..+-|++..
T Consensus 355 ~~-~-l~~v~f~~~~ 367 (418)
T 3s7i_A 355 SS-E-LHLLGFGINA 367 (418)
T ss_dssp SS-C-EEEEEEEESC
T ss_pred CC-C-EEEEEEEcCC
Confidence 54 3 6666555443
No 93
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=97.94 E-value=3.2e-05 Score=73.80 Aligned_cols=75 Identities=15% Similarity=0.256 Sum_probs=57.1
Q ss_pred cCCCeeeEEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCccccee
Q 025302 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 69 rGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
.+|.-. .+++.|.. ++..| |.+ +|+.||++|+|+..+-+.++. ....+++||++++|+|+.||...
T Consensus 42 ~~~~l~-~~~l~p~g----------l~~Ph-h~~A~ei~yV~~G~g~~g~V~~~~~-~~~~l~~GDv~~~P~G~~h~~~N 108 (418)
T 3s7i_A 42 QNHRIV-QIEAKPNT----------LVLPK-HADADNILVIQQGQATVTVANGNNR-KSFNLDEGHALRIPSGFISYILN 108 (418)
T ss_dssp TTCEEE-EEEECTTE----------EEEEE-EESEEEEEEEEESEEEEEEECSSCE-EEEEEETTEEEEECTTCEEEEEE
T ss_pred cceEEE-EEEecCCc----------eeeee-eCCCCeEEEEEEeeEEEEEEecCCE-EEEEecCCCEEEECCCCeEEEEe
Confidence 456543 66777765 57788 766 999999999999999876544 45789999999999999999866
Q ss_pred -CCCCcEEEE
Q 025302 148 -DTDNYIKAM 156 (255)
Q Consensus 148 -~~~~~vkAi 156 (255)
+++..+..+
T Consensus 109 ~g~~~~l~i~ 118 (418)
T 3s7i_A 109 RHDNQNLRVA 118 (418)
T ss_dssp CCSSCCEEEE
T ss_pred cCCCccEEEE
Confidence 444444443
No 94
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=97.93 E-value=3.2e-05 Score=74.96 Aligned_cols=86 Identities=15% Similarity=0.284 Sum_probs=66.5
Q ss_pred EEEECCCCCCChHHH-h---------hccccccccCc-ceEEEEEeceEEEEEEeCC-CcEEEEEEecCCEEEeCCCCcc
Q 025302 76 FCEVCPEKLPNYEEK-I---------KNFFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYH 143 (255)
Q Consensus 76 vVtlsp~~~Pn~e~k-~---------~kF~~EH~H~d-dEIryIleGsG~Fdvrd~d-d~wirI~ve~GDLIvVPAGt~H 143 (255)
+..++...+|.+..+ + ......|+|+. .|+.||++|+++..+-+.+ .+.+.-.+++||+++||+|..|
T Consensus 307 v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h 386 (465)
T 3qac_A 307 LTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAI 386 (465)
T ss_dssp EEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEE
Confidence 445666677776653 1 13478899987 8999999999999998765 4577778999999999999999
Q ss_pred cceeCCCCcEEEEEEecCC
Q 025302 144 RFTLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 144 rFtl~~~~~vkAiRlF~~~ 162 (255)
.-.++ +..+..+-+|+..
T Consensus 387 ~~~ag-~e~~~~l~f~~s~ 404 (465)
T 3qac_A 387 VKQAF-EDGFEWVSFKTSE 404 (465)
T ss_dssp EEEEE-EEEEEEEEEESST
T ss_pred EEEcC-CCCeEEEEEecCC
Confidence 77655 4457788888653
No 95
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=97.89 E-value=8.3e-06 Score=62.21 Aligned_cols=62 Identities=15% Similarity=0.058 Sum_probs=48.1
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEE
Q 025302 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (255)
Q Consensus 95 ~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRl 158 (255)
..+|.|.. .|+++|++|++.+... |+....+.+++||.+.+|+|+.|+.....+..+..+.+
T Consensus 30 ~~~H~H~~~~e~~~v~~G~~~v~~~--d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 30 TGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEE
T ss_pred cCcEECCCcEEEEEEeccEEEEEeC--CCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEE
Confidence 56999987 5788888999987653 44444567899999999999999998777766776655
No 96
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=97.87 E-value=3.8e-05 Score=73.36 Aligned_cols=67 Identities=10% Similarity=0.151 Sum_probs=54.4
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCC-------------cEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEe
Q 025302 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-------------KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 159 (255)
Q Consensus 94 F~~EH~H~d-dEIryIleGsG~Fdvrd~dd-------------~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF 159 (255)
....|+|+. .|+.||++|+|++.+-+.++ +.+.-.+++||+++||+|..|+-..++ .+..+-||
T Consensus 278 m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~~--~~~~v~f~ 355 (434)
T 2ea7_A 278 LLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINATS--NLNFFAFG 355 (434)
T ss_dssp EEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEE
T ss_pred eeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcCC--CeEEEEEE
Confidence 478999996 89999999999999986543 155558999999999999999987773 47777777
Q ss_pred cCC
Q 025302 160 VGD 162 (255)
Q Consensus 160 ~~~ 162 (255)
...
T Consensus 356 ~~~ 358 (434)
T 2ea7_A 356 INA 358 (434)
T ss_dssp ETC
T ss_pred CCC
Confidence 554
No 97
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=97.82 E-value=1.5e-05 Score=73.62 Aligned_cols=49 Identities=20% Similarity=0.170 Sum_probs=42.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~ 148 (255)
-..|.|...|++||++|+|++.|. ++ ++.+++||+++||++..|.+..+
T Consensus 281 ~~~H~h~~~ev~~v~~G~g~~~v~---~~--~~~~~~GD~~~vP~~~~H~~~n~ 329 (354)
T 2d40_A 281 SRVARTTDSTIYHVVEGSGQVIIG---NE--TFSFSAKDIFVVPTWHGVSFQTT 329 (354)
T ss_dssp CCCBEESSCEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCCEEEEEE
T ss_pred CCceecCCcEEEEEEeCeEEEEEC---CE--EEEEcCCCEEEECCCCeEEEEeC
Confidence 456999989999999999999993 43 57899999999999999999764
No 98
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=97.82 E-value=8.6e-06 Score=66.22 Aligned_cols=79 Identities=13% Similarity=0.002 Sum_probs=55.6
Q ss_pred eeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcE
Q 025302 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (255)
Q Consensus 74 ~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~v 153 (255)
.-++++.|+. -+..|.|..+|..|||+|+..+...+..+ ...+++||++.+|+|..|.+....+. .
T Consensus 46 ~~~~~~~pG~----------~~p~H~H~~~ee~~VL~G~~~~~~g~~~~---~~~~~~Gd~~~~p~g~~H~p~~~~e~-~ 111 (145)
T 2o1q_A 46 TAIFDCPAGS----------SFAAHVHVGPGEYFLTKGKMDVRGGKAAG---GDTAIAPGYGYESANARHDKTEFPVA-S 111 (145)
T ss_dssp EEEEEECTTE----------EECCEEESSCEEEEEEEEEEEETTCGGGT---SEEEESSEEEEECTTCEESCCEEEEE-E
T ss_pred EEEEEECCCC----------CCCccCCCCCEEEEEEEeEEEEcCCCEec---ceEeCCCEEEEECcCCccCCeECCCC-e
Confidence 4578888774 36799999988899999998864332111 15689999999999999995432332 4
Q ss_pred EEEEEecCCCCee
Q 025302 154 KAMRLFVGDPVWT 166 (255)
Q Consensus 154 kAiRlF~~~~gWv 166 (255)
..+-+|.++-.|+
T Consensus 112 ~~l~~~~gp~~f~ 124 (145)
T 2o1q_A 112 EFYMSFLGPLTFV 124 (145)
T ss_dssp EEEEEEESCEEEE
T ss_pred EEEEEECCcceec
Confidence 5566677664443
No 99
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=97.76 E-value=2.1e-05 Score=60.36 Aligned_cols=62 Identities=15% Similarity=0.087 Sum_probs=44.9
Q ss_pred ccccccCcc-eEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEE
Q 025302 95 FEEHLHTDE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (255)
Q Consensus 95 ~~EH~H~dd-EIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRl 158 (255)
..||.|..+ ++.++.+|++.+..+ |+++..+.+++||.+.+|+|..|++....+..+..+-+
T Consensus 30 ~~~H~H~~~~~iv~v~~G~~~~~~~--dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 30 TGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cCcEeCCCCEEEEEEeeEEEEEEeC--CCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEE
Confidence 479999976 455566777776553 45433468999999999999999998766655555443
No 100
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.75 E-value=0.00013 Score=62.30 Aligned_cols=63 Identities=14% Similarity=0.173 Sum_probs=48.0
Q ss_pred eEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEE
Q 025302 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (255)
Q Consensus 75 DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vk 154 (255)
-.+.+.|+. .+..|.|..+|+.||++|+ | .|.++ .+.+||++.+|+|..|.+..+......
T Consensus 128 ~l~~~~pG~----------~~p~H~H~g~E~~~VL~G~--f--~de~~-----~~~~Gd~~~~p~g~~H~p~a~~~~gc~ 188 (195)
T 2q1z_B 128 RLLWIPGGQ----------AVPDHGHRGLELTLVLQGA--F--RDETD-----RFGAGDIEIADQELEHTPVAERGLDCI 188 (195)
T ss_dssp EEEEECTTC----------BCCCCCCSSCEEEEEEESE--E--ECSSS-----EEETTCEEEECSSCCCCCEECSSSCEE
T ss_pred EEEEECCCC----------CCCCcCCCCeEEEEEEEEE--E--ECCcE-----EECCCeEEEeCcCCccCCEeCCCCCEE
Confidence 456666554 3789999999999999998 3 34332 488999999999999999887554455
Q ss_pred EE
Q 025302 155 AM 156 (255)
Q Consensus 155 Ai 156 (255)
++
T Consensus 189 ~l 190 (195)
T 2q1z_B 189 CL 190 (195)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 101
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=97.75 E-value=0.00011 Score=70.51 Aligned_cols=68 Identities=13% Similarity=0.204 Sum_probs=54.7
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC---------c--EEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEec
Q 025302 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE---------K--WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (255)
Q Consensus 93 kF~~EH~H~d-dEIryIleGsG~Fdvrd~dd---------~--wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~ 160 (255)
.....|+|+. .|+.||++|+|+..+-+.++ + .+.-.+++||+++||+|..|+-..+ + .+..+-|++
T Consensus 292 ~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~-~-~~~~v~f~~ 369 (445)
T 2cav_A 292 ALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA-S-DLNMVGIGV 369 (445)
T ss_dssp EEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEES-S-SEEEEEEEE
T ss_pred ceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC-C-CeEEEEEEc
Confidence 3488999987 89999999999999987653 3 5788899999999999999988777 3 366666764
Q ss_pred CC
Q 025302 161 GD 162 (255)
Q Consensus 161 ~~ 162 (255)
..
T Consensus 370 ~~ 371 (445)
T 2cav_A 370 NA 371 (445)
T ss_dssp SC
T ss_pred cC
Confidence 44
No 102
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=97.68 E-value=7.7e-05 Score=72.32 Aligned_cols=79 Identities=11% Similarity=0.189 Sum_probs=62.3
Q ss_pred CCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCC-c-------------------------
Q 025302 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNE-K------------------------- 123 (255)
Q Consensus 70 GY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd-~------------------------- 123 (255)
||. .=.+++.|.. +...|+|+-.|+.||++|+|++.+-..+. +
T Consensus 42 gvs-~~r~~i~p~G----------l~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~ 110 (466)
T 3kgl_A 42 GVS-FVRYIIESKG----------LYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQ 110 (466)
T ss_dssp TEE-EEEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC-------------
T ss_pred CeE-EEEEEECCCC----------EeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhcccccccccccccccccccccc
Confidence 774 4566777765 68899999999999999999999864310 0
Q ss_pred ----------------------------------EEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEec
Q 025302 124 ----------------------------------WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (255)
Q Consensus 124 ----------------------------------wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~ 160 (255)
.+ ..+++||+|.||||+.||...+.+..++++-++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv-~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d 180 (466)
T 3kgl_A 111 GQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKV-EHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLD 180 (466)
T ss_dssp ----------------------------CCEEESCE-EEEETTEEEEECTTCEEEEECCSSSCEEEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccceee-ccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEc
Confidence 11 3789999999999999999887777788887773
No 103
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.63 E-value=0.0001 Score=64.34 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=42.2
Q ss_pred CcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEE
Q 025302 101 TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (255)
Q Consensus 101 ~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRl 158 (255)
..+|+.||++|++.+.+. ++ ...+++||.+.+|+|+.|+|....+...+.+-+
T Consensus 80 ~~ee~~~Vl~G~l~~~~~---~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v 132 (261)
T 1rc6_A 80 GIETFLYVISGNITAKAE---GK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLY 132 (261)
T ss_dssp TEEEEEEEEESEEEEEET---TE--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred CceEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 458999999999999884 44 367999999999999999998765544444433
No 104
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=97.58 E-value=7.4e-05 Score=70.47 Aligned_cols=51 Identities=16% Similarity=0.214 Sum_probs=45.0
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~ 150 (255)
-..|.|...+|++|++|+|+..|. ++ ++..++||.++||++..|++..+++
T Consensus 292 t~~hRht~s~Vy~V~eG~G~~~I~---~~--~~~w~~gD~fvvP~w~~h~~~n~~~ 342 (368)
T 3nw4_A 292 TATRNEVGSTVFQVFEGAGAVVMN---GE--TTKLEKGDMFVVPSWVPWSLQAETQ 342 (368)
T ss_dssp CCCEEESSCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCEEEEESSS
T ss_pred cCCeeccccEEEEEEeCcEEEEEC---CE--EEEecCCCEEEECCCCcEEEEeCCC
Confidence 578999999999999999999884 43 5789999999999999999987643
No 105
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.52 E-value=0.00019 Score=57.69 Aligned_cols=64 Identities=13% Similarity=0.210 Sum_probs=48.5
Q ss_pred CeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCC
Q 025302 72 SYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (255)
Q Consensus 72 ~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~ 150 (255)
...-+-...|.. |.++.+.++|..|||+|++.+... ++. .+.+++||++++|+|..-..+..+.
T Consensus 42 ~~~GvWe~tPG~-----------~~~~~~~~~E~~~iLeG~~~lt~d--dG~--~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 42 TIVAVWMAEPGI-----------YNYAGRDLEETFVVVEGEALYSQA--DAD--PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp CEEEEEEECSEE-----------EEECCCSEEEEEEEEECCEEEEET--TCC--CEEECTTEEEEECTTCCEEEEECSC
T ss_pred EEEEEEecCCce-----------eECeeCCCcEEEEEEEeEEEEEeC--CCe--EEEECCCCEEEECCCCeEEEEEeEE
Confidence 344556666664 556667778999999999998764 343 4789999999999999987766544
No 106
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=97.50 E-value=0.00019 Score=63.25 Aligned_cols=52 Identities=8% Similarity=0.058 Sum_probs=41.4
Q ss_pred cCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEE
Q 025302 100 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 156 (255)
Q Consensus 100 H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAi 156 (255)
|..+|+.||++|++.+.+. ++. ..+++||.+.+|+|+.|+|....+...+.+
T Consensus 82 ~~~ee~~~Vl~G~l~~~~~---~~~--~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l 133 (274)
T 1sef_A 82 DGIQTLVYVIDGRLRVSDG---QET--HELEAGGYAYFTPEMKMYLANAQEADTEVF 133 (274)
T ss_dssp TTEEEEEEEEESEEEEECS---SCE--EEEETTEEEEECTTSCCEEEESSSSCEEEE
T ss_pred CCceEEEEEEEeEEEEEEC---CEE--EEECCCCEEEECCCCCEEEEeCCCCCEEEE
Confidence 3458999999999999884 443 679999999999999999987655444433
No 107
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.46 E-value=0.00013 Score=60.89 Aligned_cols=69 Identities=17% Similarity=0.175 Sum_probs=53.0
Q ss_pred CeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeC--C
Q 025302 72 SYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD--T 149 (255)
Q Consensus 72 ~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~--~ 149 (255)
...-++.+.|+. -+..|.|...|..|||+|+..|+ .++ ..+++||++..|+|..|..... +
T Consensus 42 ~~v~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~~~~~---e~~----~~~~~Gd~~~~P~g~~H~~~~~~~~ 104 (159)
T 3ebr_A 42 ETITLLKAPAGM----------EMPRHHHTGTVIVYTVQGSWRYK---EHD----WVAHAGSVVYETASTRHTPQSAYAE 104 (159)
T ss_dssp EEEEEEEECSSC----------BCCCEEESSCEEEEEEESCEEET---TSS----CCBCTTCEEEECSSEEECEEESSSS
T ss_pred eEEEEEEECCCC----------CcccccCCCCEEEEEEEeEEEEe---CCC----eEECCCeEEEECCCCcceeEeCCCC
Confidence 455778888875 37899999999999999998774 223 2488999999999999999876 4
Q ss_pred CCcEEEEE
Q 025302 150 DNYIKAMR 157 (255)
Q Consensus 150 ~~~vkAiR 157 (255)
+.....+-
T Consensus 105 ~e~~~~~~ 112 (159)
T 3ebr_A 105 GPDIITFN 112 (159)
T ss_dssp SSCEEEEE
T ss_pred CCCEEEEE
Confidence 44455444
No 108
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.46 E-value=0.00021 Score=61.37 Aligned_cols=63 Identities=13% Similarity=0.166 Sum_probs=48.7
Q ss_pred eEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeC
Q 025302 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (255)
Q Consensus 75 DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~ 148 (255)
+++.++... ...|..|.|++-|+.||.+|+|. .+.+.+... ..+++||++++|+|..|.+...
T Consensus 10 ~~~~~~~~~--------~~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~--~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 10 NVYRMSKFD--------TYIFNNLYINDYKMFWIDSGIAK-LIDKNCLVS--YEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEEECTTC--------EEEEEEEECSSCEEEEESSSCEE-EEETTTTEE--EEECTTEEEEECTTCEEEEEEE
T ss_pred hhhhhhccc--------chhccHhhhcceEEEEEecCceE-EECCcccee--EEEcCCCEEEEcCCCceeeccc
Confidence 566665443 24478999999999999999999 876211103 5699999999999999999765
No 109
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=97.34 E-value=0.00022 Score=64.49 Aligned_cols=78 Identities=10% Similarity=-0.028 Sum_probs=54.2
Q ss_pred eEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEE
Q 025302 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (255)
Q Consensus 75 DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vk 154 (255)
=++++.|+.- -..|.|..||..||++|++...+.+ ++. ..+++||.+.+|+|..|++..++...+.
T Consensus 73 ~lv~l~PGg~----------s~~~~h~~EEfiyVleG~l~l~l~~--g~~--~~L~~Gds~y~p~~~~H~~~N~~~Ar~l 138 (266)
T 4e2q_A 73 YLAKMKEMSS----------SGLPPQDIERLIFVVEGAVTLTNTS--SSS--KKLTVDSYAYLPPNFHHSLDCVESATLV 138 (266)
T ss_dssp EEEEECSSEE----------CCCCCTTEEEEEEEEEECEEEEC----CCC--EEECTTEEEEECTTCCCEEEESSCEEEE
T ss_pred EEEEECcCCc----------CCCCCCCCeEEEEEEEEEEEEEECC--CcE--EEEcCCCEEEECCCCCEEEEeCCCEEEE
Confidence 3667777641 2457888899999999999988851 333 5799999999999999999875433222
Q ss_pred -EEEEecCCCCee
Q 025302 155 -AMRLFVGDPVWT 166 (255)
Q Consensus 155 -AiRlF~~~~gWv 166 (255)
..+-|..-+|..
T Consensus 139 ~V~k~y~~~~g~~ 151 (266)
T 4e2q_A 139 VFERRYEYLGSHT 151 (266)
T ss_dssp EEEEECCCCTTCC
T ss_pred EEEeEeeeCCCCC
Confidence 223354545533
No 110
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.21 E-value=0.00039 Score=59.64 Aligned_cols=58 Identities=26% Similarity=0.448 Sum_probs=44.3
Q ss_pred cccccccCc-------ceEEEEEeceEEEEEEeCCC----------------cEEEEEEecCCEEEeCCCCcccceeCCC
Q 025302 94 FFEEHLHTD-------EEIRYCVAGSGYFDVRDRNE----------------KWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (255)
Q Consensus 94 F~~EH~H~d-------dEIryIleGsG~Fdvrd~dd----------------~wirI~ve~GDLIvVPAGt~HrFtl~~~ 150 (255)
...+|.|.. +|-++++.|.+++.+.+..- .+-.+.++|||.+.||+|++|||.+++.
T Consensus 65 ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H~f~agee 144 (175)
T 2y0o_A 65 TCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAGEE 144 (175)
T ss_dssp EEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCEEEEEEEE
T ss_pred cCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcEEEEeCCC
Confidence 367899975 56677999999998853211 1245789999999999999999988544
Q ss_pred C
Q 025302 151 N 151 (255)
Q Consensus 151 ~ 151 (255)
.
T Consensus 145 g 145 (175)
T 2y0o_A 145 G 145 (175)
T ss_dssp E
T ss_pred C
Confidence 3
No 111
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.20 E-value=0.0011 Score=58.89 Aligned_cols=62 Identities=24% Similarity=0.351 Sum_probs=48.3
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCC-CcEEEEEE--ecCCEEEeCCCCcccceeCCCCcEEEE
Q 025302 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWV--KKGGMIVLPAGCYHRFTLDTDNYIKAM 156 (255)
Q Consensus 95 ~~EH~H~d-dEIryIleGsG~Fdvrd~d-d~wirI~v--e~GDLIvVPAGt~HrFtl~~~~~vkAi 156 (255)
-.+|.|.. .|.++|++|++.+++++.. ++|+.+.. +..|.+.+|+|..|-|...++.....|
T Consensus 285 rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 285 KGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred eccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 56899986 7999999999999999763 56765554 223999999999999987665545444
No 112
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=97.20 E-value=0.00061 Score=67.19 Aligned_cols=85 Identities=16% Similarity=0.244 Sum_probs=64.0
Q ss_pred HHHHHHHHHhcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCC-----------------
Q 025302 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRN----------------- 121 (255)
Q Consensus 59 ~~~ld~L~~erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~d----------------- 121 (255)
.+.|+-+ |. ..-.++|.|.. +...|+|+-.|+.||++|+|++.+-..+
T Consensus 40 ~p~l~~~----Gv-s~~R~~i~p~G----------l~lPh~~~a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~ 104 (531)
T 3fz3_A 40 QGDFQCA----GV-AASRITIQRNG----------LHLPSYSNAPQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQ 104 (531)
T ss_dssp SHHHHHH----TE-EEEEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEECCTTCCCCEECCCC-------
T ss_pred ChhhccC----cc-eEEEEEecCCC----------EeCCccCCCCeEEEEEECcEEEEEEcCCCcccccccccccccccc
Confidence 3555554 43 44566777765 5789999999999999999999875321
Q ss_pred ---------------------------------------------------------------C--cEEEEEEecCCEEE
Q 025302 122 ---------------------------------------------------------------E--KWIRIWVKKGGMIV 136 (255)
Q Consensus 122 ---------------------------------------------------------------d--~wirI~ve~GDLIv 136 (255)
| +.| ..+++||.|.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv-~~vr~GDvia 183 (531)
T 3fz3_A 105 QEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKT-RRIREGDVVA 183 (531)
T ss_dssp ------------------------------------------------------------CCSCEESCC-EEEETTEEEE
T ss_pred ccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceee-ecccCCcEEE
Confidence 1 112 3689999999
Q ss_pred eCCCCcccceeCCCCcEEEEEEe
Q 025302 137 LPAGCYHRFTLDTDNYIKAMRLF 159 (255)
Q Consensus 137 VPAGt~HrFtl~~~~~vkAiRlF 159 (255)
||||+.||...+.+..+.++-++
T Consensus 184 iPaG~~~w~yN~G~~~l~iv~~~ 206 (531)
T 3fz3_A 184 IPAGVAYWSYNDGDQELVAVNLF 206 (531)
T ss_dssp ECTTCCEEEECCSSSCEEEEEEE
T ss_pred ECCCCeEEEEeCCCceEEEEEEE
Confidence 99999999998887777777666
No 113
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.10 E-value=0.0015 Score=58.25 Aligned_cols=69 Identities=13% Similarity=0.054 Sum_probs=49.1
Q ss_pred ccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEec-----CCCCeeecCCCCC
Q 025302 99 LHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV-----GDPVWTPFNRPHD 173 (255)
Q Consensus 99 ~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~-----~~~gWva~~R~~D 173 (255)
.++.||+.||++|+..... +++ .+.+++||++++|+|+.|++...+.-....++ +. +.+|=+++.+..+
T Consensus 62 ~~p~dE~~~VleG~~~lt~---~g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~-~~~~~~p~~~~~~~i~~~~~ 135 (238)
T 3myx_A 62 AYPYTEMLVMHRGSVTLTS---GTD--SVTLSTGESAVIGRGTQVRIDAQPESLWAFCA-STQASGPDKSGITALDRLAL 135 (238)
T ss_dssp SCSSEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECTTEEEEEEE-ECSCCSCCCCSEEEECTTCC
T ss_pred cCCCcEEEEEEEeEEEEEC---CCe--EEEEcCCCEEEECCCCEEEEEecCCeEEEEEe-ccCCCCCCCCccEEecCCCC
Confidence 3445899999999988765 344 47799999999999999999887664433333 33 2355566655443
No 114
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=96.98 E-value=0.00098 Score=57.98 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=36.9
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeC
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~ 148 (255)
.+|..||++|++.+.+. ++. ..+++||.+.+|+|+.|+|...
T Consensus 68 ~ee~~~Vl~G~~~~~~~---~~~--~~l~~Gd~~~~p~~~~H~~~n~ 109 (246)
T 1sfn_A 68 YQRFAFVLSGEVDVAVG---GET--RTLREYDYVYLPAGEKHMLTAK 109 (246)
T ss_dssp SEEEEEEEEEEEEEECS---SCE--EEECTTEEEEECTTCCCEEEEE
T ss_pred eeEEEEEEECEEEEEEC---CEE--EEECCCCEEEECCCCCEEEEeC
Confidence 78999999999999884 443 6799999999999999999775
No 115
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=96.87 E-value=0.0018 Score=56.60 Aligned_cols=54 Identities=19% Similarity=0.113 Sum_probs=43.8
Q ss_pred eEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCccccee
Q 025302 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 75 DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
-++.+.|+. .+..|.|...|..|||+|+.. |. + -.+.+||++..|+|+.|.+..
T Consensus 46 ~lvr~~pG~----------~~p~H~H~g~Ee~~VL~G~f~----d~-~----~~~~~Gd~~~~P~g~~H~p~a 99 (223)
T 3o14_A 46 SIVRYAPGS----------RFSAHTHDGGEEFIVLDGVFQ----DE-H----GDYPAGTYVRNPPTTSHVPGS 99 (223)
T ss_dssp EEEEECTTE----------ECCCEECTTCEEEEEEEEEEE----ET-T----EEEETTEEEEECTTCEECCEE
T ss_pred EEEEECCCC----------CcccccCCCCEEEEEEEeEEE----EC-C----eEECCCeEEEeCCCCccccEe
Confidence 467777764 477899999999999999843 32 3 258899999999999999877
No 116
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=96.85 E-value=0.0009 Score=56.22 Aligned_cols=60 Identities=20% Similarity=0.323 Sum_probs=46.9
Q ss_pred eeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC
Q 025302 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (255)
Q Consensus 74 ~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~ 149 (255)
.-++.+.|+. .+..|.|...|..|||+|+..+. +..+ ..+++||.+..|+|..|.+...+
T Consensus 45 v~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~f~~~--~~~~----~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 45 VMRASFAPGL----------TLPLHFHTGTVHMYTISGCWYYT--EYPG----QKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp EEEEEECTTC----------BCCEEEESSCEEEEEEESEEEET--TCTT----SCEETTEEEEECTTCEECEECCT
T ss_pred EEEEEECCCC----------cCCcccCCCCEEEEEEEEEEEEC--CCce----EEECCCeEEEeCCCCceeeEeCC
Confidence 4677777775 36799999999999999997762 1112 24789999999999999987754
No 117
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=96.84 E-value=0.0012 Score=55.39 Aligned_cols=80 Identities=13% Similarity=0.075 Sum_probs=55.5
Q ss_pred hcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCccccee
Q 025302 68 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 68 erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
+.| .+.-++...|+. .|..|.|+..|..|||+|+-.+...|..+.| ..++|+++.-|+|..|....
T Consensus 43 e~g-~~t~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~~~---~~~aGsYv~ePpGs~H~p~~ 108 (153)
T 3bal_A 43 ETS-SWTAIFNCPAGS----------SFASHIHAGPGEYFLTKGKMEVRGGEQEGGS---TAYAPSYGFESSGALHGKTF 108 (153)
T ss_dssp TTT-EEEEEEEECTTE----------EECCEEESSCEEEEEEESEEEETTCGGGTSE---EEESSEEEEECTTCEESCCE
T ss_pred ccc-eEEEEEEeCCCC----------CccCccCCCCEEEEEEEEEEEecCccccCcc---ccCCCeEEEcCCCCccccee
Confidence 345 456788888775 4889999999999999999877544321234 36899999999999998544
Q ss_pred CCCCcEEEEEEecCC
Q 025302 148 DTDNYIKAMRLFVGD 162 (255)
Q Consensus 148 ~~~~~vkAiRlF~~~ 162 (255)
.++..+. +-.+.++
T Consensus 109 ~~~~~~~-~~~~~Gp 122 (153)
T 3bal_A 109 FPVESQF-YMTFLGP 122 (153)
T ss_dssp ESSCEEE-EEEEESC
T ss_pred CCCCeEE-EEEEECC
Confidence 3333322 3334444
No 118
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=95.93 E-value=0.0083 Score=53.45 Aligned_cols=47 Identities=17% Similarity=0.271 Sum_probs=37.7
Q ss_pred ccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC
Q 025302 99 LHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (255)
Q Consensus 99 ~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~ 149 (255)
.|+.+|..|||+|+..+... +++ .+++++||.+++|+|..=.++..+
T Consensus 183 ~~~~~E~~~ILeG~v~lt~~--~G~--~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 183 PHKIHELMNLIEGRVVLSLE--NGS--SLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp ECSSCEEEEEEECCEEEEET--TSC--EEEECTTCEEEECTTCEEEEEESS
T ss_pred cCCCCEEEEEEEeEEEEEeC--CCC--EEEECCCCEEEECCCCEEEEEECc
Confidence 34678999999999887653 454 478999999999999988776653
No 119
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=95.78 E-value=0.031 Score=45.95 Aligned_cols=66 Identities=18% Similarity=0.235 Sum_probs=47.7
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCE-EEeCCCCcccceeCCCCcEEEEEEecCCC
Q 025302 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGM-IVLPAGCYHRFTLDTDNYIKAMRLFVGDP 163 (255)
Q Consensus 95 ~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDL-IvVPAGt~HrFtl~~~~~vkAiRlF~~~~ 163 (255)
-.||.|.. .|.+++++|+..+.+.|... .-++.+...+. +.||+|+.|-+..-+++ ...+ .+++.+
T Consensus 48 RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~-~~~~~L~~~~~gL~IppgvWh~~~~~s~~-avll-vlas~~ 115 (141)
T 2pa7_A 48 RGFHAHKKLEQVLVCLNGSCRVILDDGNI-IQEITLDSPAVGLYVGPAVWHEMHDFSSD-CVMM-VLASDY 115 (141)
T ss_dssp EEEEEESSCCEEEEEEESCEEEEEECSSC-EEEEEECCTTEEEEECTTCEEEEECCCTT-CEEE-EEESSC
T ss_pred ECcCcCCCceEEEEEEccEEEEEEECCcE-EEEEEECCCCcEEEeCCCEEEEEEEcCCC-eEEE-EECCCC
Confidence 45899986 89999999999999965433 34566666666 99999999999765554 3333 444443
No 120
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=94.29 E-value=0.11 Score=44.49 Aligned_cols=56 Identities=20% Similarity=0.424 Sum_probs=43.6
Q ss_pred cccccc---CcceEEEEEeceEE---EEEEeCC----CcEEEEEEec--CCEEEeCCCCcccceeCCCC
Q 025302 95 FEEHLH---TDEEIRYCVAGSGY---FDVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (255)
Q Consensus 95 ~~EH~H---~ddEIryIleGsG~---Fdvrd~d----d~wirI~ve~--GDLIvVPAGt~HrFtl~~~~ 151 (255)
-..|.| ...+...++.|+.+ +|+| ++ ++|..+.+.+ +-.+.||+|.-|-|..-+++
T Consensus 61 RGlH~q~p~~q~klv~vv~G~v~dV~VD~R-~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (185)
T 1ep0_A 61 RGLHFQREKPQGKLVRVIRGEIFDVAVDLR-KNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE 128 (185)
T ss_dssp EEEEEESSSCCCEEEEEEESEEEEEEEECC-TTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred ecceecCCccccEEEEEeCCeEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 346766 66899999999986 5555 22 4799999876 57899999999999766554
No 121
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=94.16 E-value=0.1 Score=45.20 Aligned_cols=57 Identities=14% Similarity=0.055 Sum_probs=46.9
Q ss_pred ccccccCcceEEEEEe-ceEEEEEEeCC-----CcEEEEEEecCCEEEeCCCCcccceeCCCC
Q 025302 95 FEEHLHTDEEIRYCVA-GSGYFDVRDRN-----EKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 151 (255)
Q Consensus 95 ~~EH~H~ddEIryIle-GsG~Fdvrd~d-----d~wirI~ve~GDLIvVPAGt~HrFtl~~~~ 151 (255)
-.+|.|.......++. |+.+--+-|.. ++|..+.+.++-.+.||+|.-|-|..-+++
T Consensus 73 RGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~ 135 (197)
T 1nxm_A 73 RGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF 135 (197)
T ss_dssp EEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE
T ss_pred ceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC
Confidence 4588898899999999 99755555544 679999999999999999999999765554
No 122
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=94.08 E-value=0.12 Score=44.12 Aligned_cols=56 Identities=18% Similarity=0.469 Sum_probs=43.1
Q ss_pred cccccc----CcceEEEEEeceEE---EEEEeCC----CcEEEEEEecC--CEEEeCCCCcccceeCCCC
Q 025302 95 FEEHLH----TDEEIRYCVAGSGY---FDVRDRN----EKWIRIWVKKG--GMIVLPAGCYHRFTLDTDN 151 (255)
Q Consensus 95 ~~EH~H----~ddEIryIleGsG~---Fdvrd~d----d~wirI~ve~G--DLIvVPAGt~HrFtl~~~~ 151 (255)
-..|.| .......++.|+.+ +|+| ++ ++|..+.+.+. -.+.||+|.-|-|..-+++
T Consensus 60 RGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R-~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (183)
T 1dzr_A 60 RGLHFQRGENAQGKLVRCAVGEVFDVAVDIR-KESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY 128 (183)
T ss_dssp EEEEEECGGGCCCEEEEEEESEEEEEEEECC-TTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eeeEccCCCCCCcEEEEEeCCeEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 346766 55899999999986 5555 23 56999998874 7899999999999765554
No 123
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=93.98 E-value=0.11 Score=44.27 Aligned_cols=88 Identities=16% Similarity=0.209 Sum_probs=61.4
Q ss_pred hcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceE-EEEEEeCCCcEEEEE----EecCCE--EEeCCC
Q 025302 68 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSG-YFDVRDRNEKWIRIW----VKKGGM--IVLPAG 140 (255)
Q Consensus 68 erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG-~Fdvrd~dd~wirI~----ve~GDL--IvVPAG 140 (255)
.|...+.=-+-|.++. +-.||...-|||+++..|++ ...+-+.|++..++. +.+|+. ++||+|
T Consensus 45 ~R~~~T~IYfLL~~g~----------~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G 114 (170)
T 1yud_A 45 SRQLWSSIYFLLRTGE----------VSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKG 114 (170)
T ss_dssp SSBSCEEEEEEEETTC----------CEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTT
T ss_pred CCccceEEEEEECCCC----------CCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCC
Confidence 5666666566666553 35789988899999999997 666655666655555 457888 999999
Q ss_pred CcccceeCCCCcEEEEEEecCCCCeee
Q 025302 141 CYHRFTLDTDNYIKAMRLFVGDPVWTP 167 (255)
Q Consensus 141 t~HrFtl~~~~~vkAiRlF~~~~gWva 167 (255)
+.+.-...+..+ ++--..-.|||.-
T Consensus 115 ~wqaa~~~~g~~--~LV~C~VaPGF~f 139 (170)
T 1yud_A 115 CIFGSAMNQDGF--SLVGCMVSPGFTF 139 (170)
T ss_dssp CEEEEEESSSSE--EEEEEEESSCCCG
T ss_pred CEEEEEECCCCc--EEEEEEECCCccC
Confidence 988776543332 3445566788865
No 124
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=93.88 E-value=0.15 Score=43.60 Aligned_cols=56 Identities=20% Similarity=0.392 Sum_probs=43.4
Q ss_pred cccccc---CcceEEEEEeceEE---EEEEeCC----CcEEEEEEec--CCEEEeCCCCcccceeCCCC
Q 025302 95 FEEHLH---TDEEIRYCVAGSGY---FDVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (255)
Q Consensus 95 ~~EH~H---~ddEIryIleGsG~---Fdvrd~d----d~wirI~ve~--GDLIvVPAGt~HrFtl~~~~ 151 (255)
-..|.| .......++.|+.+ +|+| ++ ++|..+.+.+ +-.+.||+|.-|-|..-+++
T Consensus 62 RG~H~q~p~~q~Klv~vv~G~v~dV~vD~R-~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 129 (184)
T 2ixk_A 62 RGLHYQIRQAQGKLVRATLGEVFDVAVDLR-RGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY 129 (184)
T ss_dssp EEEEEESSSCCCEEEEEEESEEEEEEEECB-TTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eeEEeCCCCCcCEEEEEeCCeEEEEEEECC-CCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC
Confidence 346777 56899999999986 5555 22 4799999887 47899999999999766554
No 125
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=93.52 E-value=0.059 Score=47.03 Aligned_cols=47 Identities=13% Similarity=0.119 Sum_probs=37.3
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 151 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~ 151 (255)
+..|.|..+|+ |||+|+.. |. + -.+.+||.|.+|+|..|.+.++++.
T Consensus 159 ~~~~~hgG~Ei-lVL~G~~~----d~-~----~~~~~GsWlR~P~gs~h~~~ag~~g 205 (223)
T 3o14_A 159 LTSEAAGGIEV-LVLDGDVT----VN-D----EVLGRNAWLRLPEGEALSATAGARG 205 (223)
T ss_dssp EEECCSSCEEE-EEEEEEEE----ET-T----EEECTTEEEEECTTCCEEEEEEEEE
T ss_pred cCCCCCCcEEE-EEEEeEEE----EC-C----ceECCCeEEEeCCCCccCcEECCCC
Confidence 78899967887 99999943 33 3 3588999999999999998885543
No 126
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=93.35 E-value=0.5 Score=40.02 Aligned_cols=56 Identities=11% Similarity=0.097 Sum_probs=45.1
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCC------CcEEEEEEe---cCCEEEeCCCCcccceeCCC
Q 025302 95 FEEHLHT-DEEIRYCVAGSGYFDVRDRN------EKWIRIWVK---KGGMIVLPAGCYHRFTLDTD 150 (255)
Q Consensus 95 ~~EH~H~-ddEIryIleGsG~Fdvrd~d------d~wirI~ve---~GDLIvVPAGt~HrFtl~~~ 150 (255)
=..|.|. ..+...+++|+...-+-|.. ++|..+.+. ++-.+.||+|..|-|..-++
T Consensus 66 RG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 66 KAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGD 131 (174)
T ss_dssp EEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTT
T ss_pred ECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccC
Confidence 4578776 48999999999998886542 568999998 55689999999999976555
No 127
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=93.15 E-value=0.12 Score=46.65 Aligned_cols=57 Identities=25% Similarity=0.249 Sum_probs=40.5
Q ss_pred cccccccCc-ceEEEEEec---eEEEEEEeCC-------------CcE------EEEEEecCCEEEeCCCCcccceeCCC
Q 025302 94 FFEEHLHTD-EEIRYCVAG---SGYFDVRDRN-------------EKW------IRIWVKKGGMIVLPAGCYHRFTLDTD 150 (255)
Q Consensus 94 F~~EH~H~d-dEIryIleG---sG~Fdvrd~d-------------d~w------irI~ve~GDLIvVPAGt~HrFtl~~~ 150 (255)
--.+|.|.. .|-++..-| ..+....+.+ +.. -.|.+.||+-|.+|+|++|||-..+.
T Consensus 118 ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~~H~F~ae~g 197 (246)
T 3kmh_A 118 VTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWAEAG 197 (246)
T ss_dssp EEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEECTTEEEEEEECTT
T ss_pred CCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecCCCCEEEEEecCC
Confidence 367999987 677666666 3444444322 111 24578999999999999999998876
No 128
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=93.13 E-value=0.23 Score=43.37 Aligned_cols=57 Identities=16% Similarity=0.308 Sum_probs=43.9
Q ss_pred ccccccC----cceEEEEEeceE---EEEEEeCC---CcEEEEEEec--CCEEEeCCCCcccceeCCCC
Q 025302 95 FEEHLHT----DEEIRYCVAGSG---YFDVRDRN---EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (255)
Q Consensus 95 ~~EH~H~----ddEIryIleGsG---~Fdvrd~d---d~wirI~ve~--GDLIvVPAGt~HrFtl~~~~ 151 (255)
-..|.|. ..+...+++|+. .+|+|... ++|..+.+.+ +-.+.||+|..|-|..-+++
T Consensus 83 RGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~ 151 (205)
T 3ryk_A 83 RGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH 151 (205)
T ss_dssp EEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS
T ss_pred eEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC
Confidence 3466664 689999999997 56666222 5799999986 68899999999999765554
No 129
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=93.09 E-value=0.63 Score=38.07 Aligned_cols=75 Identities=17% Similarity=0.203 Sum_probs=54.3
Q ss_pred HHHhhcccccc----ccCc-ceEEEEEeceEEEEEEeCCCc---EEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEe
Q 025302 88 EEKIKNFFEEH----LHTD-EEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 159 (255)
Q Consensus 88 e~k~~kF~~EH----~H~d-dEIryIleGsG~Fdvrd~dd~---wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF 159 (255)
+..-+.|...| ||.. -+-.-|++|+..|..-+.++. --.+...+|+..++|++..|+...-+++-.--+.||
T Consensus 20 ~tlP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leFy 99 (127)
T 3bb6_A 20 QTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFF 99 (127)
T ss_dssp TTSCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEEE
T ss_pred ccChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEEEEEEE
Confidence 33447788888 6877 588889999998875333332 234778899999999999999986444444448887
Q ss_pred cCC
Q 025302 160 VGD 162 (255)
Q Consensus 160 ~~~ 162 (255)
..+
T Consensus 100 c~~ 102 (127)
T 3bb6_A 100 VAP 102 (127)
T ss_dssp ECH
T ss_pred eCC
Confidence 665
No 130
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=93.08 E-value=0.11 Score=50.75 Aligned_cols=44 Identities=9% Similarity=0.062 Sum_probs=37.7
Q ss_pred CcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC
Q 025302 101 TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (255)
Q Consensus 101 ~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~ 149 (255)
+.||+.++-+|++.+.-+ - + .+.+++||+++||.||.++..+.+
T Consensus 177 DGD~Livpq~G~l~i~TE-f-G---~L~v~pgei~VIPRGi~frv~l~~ 220 (471)
T 1eyb_A 177 DGDFLIVPQKGNLLIYTE-F-G---KMLVQPNEICVIQRGMRFSIDVFE 220 (471)
T ss_dssp SEEEEEEEEESCEEEEET-T-E---EEEECTTEEEEECTTCCEEEECSS
T ss_pred CCCEEEEEEeCCEEEEEe-c-c---cEEeccCCEEEECCccEEEEeeCC
Confidence 449999999999988765 2 3 488999999999999999998866
No 131
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=92.77 E-value=0.25 Score=43.01 Aligned_cols=55 Identities=24% Similarity=0.503 Sum_probs=42.0
Q ss_pred cccccC----cceEEEEEeceEE---EEEEeCC----CcEEEEEEecC--CEEEeCCCCcccceeCCCC
Q 025302 96 EEHLHT----DEEIRYCVAGSGY---FDVRDRN----EKWIRIWVKKG--GMIVLPAGCYHRFTLDTDN 151 (255)
Q Consensus 96 ~EH~H~----ddEIryIleGsG~---Fdvrd~d----d~wirI~ve~G--DLIvVPAGt~HrFtl~~~~ 151 (255)
..|.|. ......++.|+.+ +|+| ++ ++|..+.+.+. -.+.||+|.-|-|..-+++
T Consensus 61 GlH~q~~p~~q~Klv~vv~G~v~dV~VDlR-~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (205)
T 1oi6_A 61 GIHYTVTPPGTAKYVYCARGKAMDIVIDIR-VGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD 128 (205)
T ss_dssp EEEEECTTTCCCEEEEEEESCEEEEEECCC-BTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT
T ss_pred eeeccCCCCCCceEEEEeCCEEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC
Confidence 466664 5899999999986 4444 22 46999998874 7899999999999765555
No 132
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=92.76 E-value=0.25 Score=43.46 Aligned_cols=56 Identities=21% Similarity=0.322 Sum_probs=43.0
Q ss_pred cccccC----cceEEEEEeceEE---EEEEeC---CCcEEEEEEecC--CEEEeCCCCcccceeCCCC
Q 025302 96 EEHLHT----DEEIRYCVAGSGY---FDVRDR---NEKWIRIWVKKG--GMIVLPAGCYHRFTLDTDN 151 (255)
Q Consensus 96 ~EH~H~----ddEIryIleGsG~---Fdvrd~---dd~wirI~ve~G--DLIvVPAGt~HrFtl~~~~ 151 (255)
-.|.|. ......+++|+.+ +|+|.. -++|..+.+.+. -.+.||+|.-|-|..-+++
T Consensus 69 GlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 136 (216)
T 2c0z_A 69 GIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE 136 (216)
T ss_dssp EEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred cCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC
Confidence 466665 5899999999986 555521 156999998875 6899999999999765554
No 133
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=92.72 E-value=1 Score=37.85 Aligned_cols=68 Identities=13% Similarity=0.192 Sum_probs=52.0
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEe-CCCc---EEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCC
Q 025302 95 FEEHLHTD-EEIRYCVAGSGYFDVRD-RNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 95 ~~EH~H~d-dEIryIleGsG~Fdvrd-~dd~---wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~ 162 (255)
-..|-|.. ..+..|++|+....+-+ .+++ .-+..+++||.++.|+|-.|++....+.....+-+|..+
T Consensus 82 S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVSlHvY~pp 154 (171)
T 3eqe_A 82 TTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVSLHVYSPP 154 (171)
T ss_dssp CCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEEEEEEESC
T ss_pred cccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEEEEEeCCC
Confidence 45799997 68888999999865422 1221 124568999999999999999987666677888888876
No 134
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=92.35 E-value=1 Score=38.66 Aligned_cols=70 Identities=16% Similarity=0.150 Sum_probs=52.2
Q ss_pred ccccccccCcceEEEEEeceEEEEE--EeCCCcEE----EEEEecCCEEEeCC--CCcccceeC-CCCcEEEEEEecCC
Q 025302 93 NFFEEHLHTDEEIRYCVAGSGYFDV--RDRNEKWI----RIWVKKGGMIVLPA--GCYHRFTLD-TDNYIKAMRLFVGD 162 (255)
Q Consensus 93 kF~~EH~H~ddEIryIleGsG~Fdv--rd~dd~wi----rI~ve~GDLIvVPA--Gt~HrFtl~-~~~~vkAiRlF~~~ 162 (255)
+.-..|-|....+..|++|+..-.+ +..++... +..+.+||.+.+++ |--|+.... .+.....+.+|..+
T Consensus 90 q~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsLHvY~~~ 168 (208)
T 2gm6_A 90 QRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHVYGAN 168 (208)
T ss_dssp CBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSC
T ss_pred cccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCCcEEEEEEEcCC
Confidence 3467899999999999999886554 22223222 46799999999999 888988744 45567888888664
No 135
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=91.34 E-value=0.28 Score=40.39 Aligned_cols=48 Identities=13% Similarity=0.299 Sum_probs=36.5
Q ss_pred CcceEEEEEeceEEEEEEeCC----------------------------------CcEEEEEEecCCEEEeCCCCcccce
Q 025302 101 TDEEIRYCVAGSGYFDVRDRN----------------------------------EKWIRIWVKKGGMIVLPAGCYHRFT 146 (255)
Q Consensus 101 ~ddEIryIleGsG~Fdvrd~d----------------------------------d~wirI~ve~GDLIvVPAGt~HrFt 146 (255)
..+-+...+.|+=.+.+-..+ -..+++.+++||+|.||+|-.|.-.
T Consensus 143 ~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~gW~H~V~ 222 (235)
T 4gjz_A 143 PQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVR 222 (235)
T ss_dssp SSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEEEECTTCEEEEE
T ss_pred cccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEEEeCCCCcEEEE
Confidence 346777788999998884211 1357899999999999999999765
Q ss_pred eC
Q 025302 147 LD 148 (255)
Q Consensus 147 l~ 148 (255)
.-
T Consensus 223 ~l 224 (235)
T 4gjz_A 223 AL 224 (235)
T ss_dssp ES
T ss_pred EC
Confidence 43
No 136
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=90.73 E-value=0.89 Score=40.51 Aligned_cols=63 Identities=16% Similarity=0.288 Sum_probs=46.0
Q ss_pred ccccccCcc-eEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCC--Ccccce-eCCCCcEEEEEEecC
Q 025302 95 FEEHLHTDE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG--CYHRFT-LDTDNYIKAMRLFVG 161 (255)
Q Consensus 95 ~~EH~H~dd-EIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAG--t~HrFt-l~~~~~vkAiRlF~~ 161 (255)
|..|.|.+. .|-|+++|+..+ +|.-+. .-.+++||+-..-|| +.|-=. ..++..+..+.|...
T Consensus 77 f~~HPHrg~EtvTyvl~G~~~H--~DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlWi~ 143 (256)
T 2vec_A 77 FQPRTYPKVDILNVILDGEAEY--RDSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLD 143 (256)
T ss_dssp EEEECCSSEEEEEEEEESEEEE--EETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEEEE
T ss_pred cCCcCCCCcEEEEEEEeeEEEE--EeCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEEEe
Confidence 789999995 589999999775 555343 356899999998665 789743 344456787877655
No 137
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=88.87 E-value=1.4 Score=38.12 Aligned_cols=56 Identities=23% Similarity=0.338 Sum_probs=42.4
Q ss_pred ccccccC----cceEEEEEeceEEE---EEEeCC----CcEEEEEEec--CCEEEeCCCCcccceeCCCC
Q 025302 95 FEEHLHT----DEEIRYCVAGSGYF---DVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (255)
Q Consensus 95 ~~EH~H~----ddEIryIleGsG~F---dvrd~d----d~wirI~ve~--GDLIvVPAGt~HrFtl~~~~ 151 (255)
-..|.|. ......++.|+.+. |+| ++ ++|..+.+.+ +-.+.||+|.-|-|..-+++
T Consensus 78 RGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR-~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~ 146 (196)
T 1wlt_A 78 RGLHYQRTPKEQGKIIFVPKGRILDVAVDVR-KSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS 146 (196)
T ss_dssp EEEEEECTTSCCEEEEEEEESEEEEEEEECB-TTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE
T ss_pred eeEEccCCCCCCceEEEEeCCEEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 3466665 58999999999855 444 22 4699999886 68899999999999765553
No 138
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=88.81 E-value=0.75 Score=41.72 Aligned_cols=49 Identities=22% Similarity=0.356 Sum_probs=35.9
Q ss_pred ccccccCcc---------eEEEE-Ee---ceEEEEE----EeCCCcEEEEEEecCCEEEeCCCCccccee
Q 025302 95 FEEHLHTDE---------EIRYC-VA---GSGYFDV----RDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 95 ~~EH~H~dd---------EIryI-le---GsG~Fdv----rd~dd~wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
|..|+|+.+ |++|+ ++ |.|+-.+ + ..|+ .+.++.||.++||.|- |--.+
T Consensus 168 yPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~-~~de--~~~V~~~d~VlvP~Gy-Hp~~a 233 (270)
T 2qjv_A 168 WPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDR-SLDE--CMAVYNRDVVXVPXGY-HPVAT 233 (270)
T ss_dssp CSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTS-SSEE--EEEEETTCEEEESSSB-CCEEE
T ss_pred CCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCC-CCce--EEEEECCCEEecCCCc-CCCcC
Confidence 789999975 99987 44 5555444 2 1232 4889999999999999 97443
No 139
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=87.74 E-value=2.3 Score=37.56 Aligned_cols=56 Identities=25% Similarity=0.451 Sum_probs=42.3
Q ss_pred cccccC----cceEEEEEeceEE---EEEEeC---CCcEEEEEEecC--CEEEeCCCCcccceeCCCC
Q 025302 96 EEHLHT----DEEIRYCVAGSGY---FDVRDR---NEKWIRIWVKKG--GMIVLPAGCYHRFTLDTDN 151 (255)
Q Consensus 96 ~EH~H~----ddEIryIleGsG~---Fdvrd~---dd~wirI~ve~G--DLIvVPAGt~HrFtl~~~~ 151 (255)
-.|.|. ......++.|+.+ +|+|.. -++|..+.+.+. -.+.||+|.-|-|..-+++
T Consensus 80 GlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 147 (225)
T 1upi_A 80 GLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN 147 (225)
T ss_dssp EEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS
T ss_pred eeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC
Confidence 466664 5899999999986 444421 146999998875 6899999999999765555
No 140
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=87.02 E-value=0.81 Score=42.05 Aligned_cols=52 Identities=12% Similarity=0.181 Sum_probs=39.9
Q ss_pred ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecC
Q 025302 103 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 103 dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~ 161 (255)
|=..++++|+....+ +++ ...+++||.|.||||+.|.+..+++. +++.+-.+
T Consensus 227 d~wiWqLEGss~Vt~---~~q--~~~L~~~DsLLIpa~~~y~~~r~~gs--v~L~I~~~ 278 (286)
T 2qnk_A 227 DVWLWQLEGSSVVTM---GGR--RLSLAPDDSLLVLAGTSYAWERTQGS--VALSVTQD 278 (286)
T ss_dssp CEEEEEEESCEEEEE---TTE--EEEECTTEEEEECTTCCEEEEECTTC--EEEEEEEC
T ss_pred cEEEEEEcCceEEEE---CCe--EEeccCCCEEEecCCCeEEEEecCCe--EEEEEEEC
Confidence 667889999987665 454 36799999999999999998876663 55655544
No 141
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=86.75 E-value=2.1 Score=39.11 Aligned_cols=39 Identities=10% Similarity=0.125 Sum_probs=31.1
Q ss_pred cEEEEEEecCCEEEeCCCCcccceeCC-CCcEEEEEEecC
Q 025302 123 KWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKAMRLFVG 161 (255)
Q Consensus 123 ~wirI~ve~GDLIvVPAGt~HrFtl~~-~~~vkAiRlF~~ 161 (255)
..+.+.+++||+|.||+|-.|.-...+ ...-.++.++..
T Consensus 259 ~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~~ 298 (349)
T 3d8c_A 259 VGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYK 298 (349)
T ss_dssp CEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEEEE
T ss_pred CcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEEcC
Confidence 578999999999999999999887654 345667777544
No 142
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=86.40 E-value=2.7 Score=36.89 Aligned_cols=63 Identities=21% Similarity=0.407 Sum_probs=45.3
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCC--CCccc-ceeCCCCcEEEEEEecC
Q 025302 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPA--GCYHR-FTLDTDNYIKAMRLFVG 161 (255)
Q Consensus 95 ~~EH~H~d-dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPA--Gt~Hr-Ftl~~~~~vkAiRlF~~ 161 (255)
|..|.|.+ |.|-|+++|+... +|.-+. .-.+++||+-..-| |+.|- +...++..+..+.|...
T Consensus 54 f~~HPHrg~EtvTyvl~G~~~H--~DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlWv~ 120 (242)
T 1tq5_A 54 FGTHPHKDMEILTYVLEGTVEH--QDSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIM 120 (242)
T ss_dssp EEEEEECSCEEEEEEEESEEEE--EESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEEEC
T ss_pred CCCcCCCCcEEEEEEEEeEEEE--EeCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEEEc
Confidence 68999998 5599999998765 555333 35689999988855 58896 33344466888877753
No 143
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=86.22 E-value=6.3 Score=38.47 Aligned_cols=71 Identities=17% Similarity=0.279 Sum_probs=47.1
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCC--------------------CcEEEEEEecCCEEEeCCCCcccceeCCCCcEE
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRN--------------------EKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~d--------------------d~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vk 154 (255)
|..|.-+.|=+..-+.|+=...+.... ...+.+.+++||++.||+|..|.-+..++.+-.
T Consensus 178 ~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~Sl 257 (489)
T 4diq_A 178 FAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSL 257 (489)
T ss_dssp SCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEE
T ss_pred ccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEecCCCceE
Confidence 344554556666667777777776432 123578999999999999999998876544444
Q ss_pred EEEEecCC-CCe
Q 025302 155 AMRLFVGD-PVW 165 (255)
Q Consensus 155 AiRlF~~~-~gW 165 (255)
.+.+-... .-|
T Consensus 258 hlTi~~~~~~tw 269 (489)
T 4diq_A 258 HLTLSTYQRNTW 269 (489)
T ss_dssp EEEEEECTTCBH
T ss_pred EEeecccCcccH
Confidence 55554432 345
No 144
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=86.18 E-value=2.4 Score=40.47 Aligned_cols=55 Identities=15% Similarity=0.245 Sum_probs=41.0
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCC----------------CcEEEEEEecCCEEEeCCCCcccceeCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVRDRN----------------EKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvrd~d----------------d~wirI~ve~GDLIvVPAGt~HrFtl~~ 149 (255)
|..|.-..|=+.+.+.|+=.+.+-..+ ...+.+.+++||++.||+|..|.-...+
T Consensus 153 ~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 153 LPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp SCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred ccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 456665556677778898888875432 1235789999999999999999986654
No 145
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=85.99 E-value=1.1 Score=33.30 Aligned_cols=40 Identities=10% Similarity=0.184 Sum_probs=29.9
Q ss_pred eeeEEEECCCCCCChHHHhhccccccccCc-ceEEEEEeceEEEEEEeCCC
Q 025302 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE 122 (255)
Q Consensus 73 ~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~d-dEIryIleGsG~Fdvrd~dd 122 (255)
+.-.+.+.++. .+..|+|.- -||.||++|++++.+-+..+
T Consensus 37 s~~r~~l~~gg----------~~~PH~hprA~ei~~V~~G~~~v~~V~~~g 77 (79)
T 1dgw_X 37 LLNCLQMNEGA----------LFVPHYNSRATVILVANEGRAEVELVGLEQ 77 (79)
T ss_dssp EEEEEEECTTC----------EEEEEEESSCEEEEEEEESCEEEEEEEEC-
T ss_pred ceEEEEEcCCc----------CcCCccCCCCcEEEEEEeceEEEEEecCCC
Confidence 34455566654 478999997 79999999999998875443
No 146
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=81.50 E-value=3.9 Score=37.34 Aligned_cols=54 Identities=20% Similarity=0.413 Sum_probs=40.0
Q ss_pred ccccccCcceEEEEEeceEEEEEE-eCC---------------------------------CcEEEEEEecCCEEEeCCC
Q 025302 95 FEEHLHTDEEIRYCVAGSGYFDVR-DRN---------------------------------EKWIRIWVKKGGMIVLPAG 140 (255)
Q Consensus 95 ~~EH~H~ddEIryIleGsG~Fdvr-d~d---------------------------------d~wirI~ve~GDLIvVPAG 140 (255)
...|....+-+...+.|+=.+.+- ..+ ...+.+.+++||++.||+|
T Consensus 154 ~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pGD~LyiP~g 233 (342)
T 1vrb_A 154 FKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRG 233 (342)
T ss_dssp CCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCEEEECTT
T ss_pred CCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCCcEEEeCCC
Confidence 345665556677778898888776 211 1246789999999999999
Q ss_pred CcccceeC
Q 025302 141 CYHRFTLD 148 (255)
Q Consensus 141 t~HrFtl~ 148 (255)
..|.-...
T Consensus 234 wwH~v~s~ 241 (342)
T 1vrb_A 234 LWHSTKSD 241 (342)
T ss_dssp CEEEEECS
T ss_pred ccEEEEEC
Confidence 99988765
No 147
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=80.21 E-value=9 Score=33.22 Aligned_cols=56 Identities=23% Similarity=0.297 Sum_probs=41.5
Q ss_pred ccccc----CcceEEEEEeceEEEEEEe--CC----CcEEEEEEec--CCEEEeCCCCcccceeCCCC
Q 025302 96 EEHLH----TDEEIRYCVAGSGYFDVRD--RN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (255)
Q Consensus 96 ~EH~H----~ddEIryIleGsG~Fdvrd--~d----d~wirI~ve~--GDLIvVPAGt~HrFtl~~~~ 151 (255)
..|.| .......++.|+.+--+-| ++ ++|..+.+.+ +-.+.||+|.-|-|..-+++
T Consensus 58 GlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~ 125 (201)
T 4hn1_A 58 GINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD 125 (201)
T ss_dssp EEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT
T ss_pred EEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC
Confidence 45665 4689999999997433333 12 5799888886 67899999999999765544
No 148
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=79.33 E-value=6.6 Score=35.53 Aligned_cols=38 Identities=13% Similarity=0.304 Sum_probs=29.1
Q ss_pred EEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEE-ecCCC
Q 025302 124 WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL-FVGDP 163 (255)
Q Consensus 124 wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRl-F~~~~ 163 (255)
.+.+.+++||+|.||+|-.|.-...+ .-.++.+ |.+.+
T Consensus 239 ~~~~~L~pGD~LyiP~gWwH~v~~l~--~sisvn~~~~~~~ 277 (338)
T 3al5_A 239 RYECSLEAGDVLFIPALWFHNVISEE--FGVGVNIFWKHLP 277 (338)
T ss_dssp EEEEEECTTCEEEECTTCEEEEEESS--CEEEEEEEECSSC
T ss_pred CEEEEECCCCEEEECCCCeEEEeeCC--CEEEEEEEecCCc
Confidence 78999999999999999999886653 2356664 55544
No 149
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=77.07 E-value=1 Score=40.75 Aligned_cols=45 Identities=16% Similarity=0.127 Sum_probs=33.1
Q ss_pred ceEEEEEe-ceEEEEEEeC-----------CCc------EEEEEEecCCEEEeCCCCccccee
Q 025302 103 EEIRYCVA-GSGYFDVRDR-----------NEK------WIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 103 dEIryIle-GsG~Fdvrd~-----------dd~------wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
.|..|+++ .+++++++.. ++. --++.+++||.+.||||+.|-.-.
T Consensus 118 pE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~~ 180 (300)
T 1zx5_A 118 ESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGEG 180 (300)
T ss_dssp CEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEES
T ss_pred cEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcCC
Confidence 67778777 4667776521 112 457889999999999999997654
No 150
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=76.21 E-value=8.8 Score=34.22 Aligned_cols=62 Identities=21% Similarity=0.360 Sum_probs=43.4
Q ss_pred ccccccCcce-EEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCC--CCcccceeCCCCcEEEEEEec
Q 025302 95 FEEHLHTDEE-IRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPA--GCYHRFTLDTDNYIKAMRLFV 160 (255)
Q Consensus 95 ~~EH~H~ddE-IryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPA--Gt~HrFtl~~~~~vkAiRlF~ 160 (255)
|..|.|.+-| |-|+++|+... +|.-+. .-.+++||+=..=| |+.|-=...++..+..+.|..
T Consensus 52 f~~HPHrg~EtVTyvl~G~~~H--~DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWv 116 (277)
T 2p17_A 52 FDVHPHRGIETVTYVISGELEH--FDSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWV 116 (277)
T ss_dssp CCCEEECSEEEEEEEEESCEEE--EETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEE
T ss_pred CCCCCCCCcEEEEEEEEeEEEE--eeCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEEe
Confidence 8899999955 99999999665 555443 35688999955555 577864333445577776665
No 151
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=75.28 E-value=9.5 Score=30.68 Aligned_cols=71 Identities=14% Similarity=0.225 Sum_probs=47.5
Q ss_pred hccccccccCc--ceEEEEEeceEEEEEEeCCCc---EEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCCC
Q 025302 92 KNFFEEHLHTD--EEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDP 163 (255)
Q Consensus 92 ~kF~~EH~H~d--dEIryIleGsG~Fdvrd~dd~---wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~~ 163 (255)
+.|..-|.=.. =.-.-|++|+..|..=+.++. -..+...+|+.-++|+...|+-.++++-.+. +.||..++
T Consensus 26 ~~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f~-leFyc~~~ 101 (119)
T 3dl3_A 26 EALLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQFN-INFWSDQD 101 (119)
T ss_dssp HHHHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEEE-EEEEECC-
T ss_pred HHHHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEEE-EEEEECch
Confidence 55555553332 134557999999986332221 1346788999999999999999965555444 77887664
No 152
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=75.03 E-value=1.2 Score=40.40 Aligned_cols=24 Identities=29% Similarity=0.508 Sum_probs=20.5
Q ss_pred EEEEEecCCEEEeCCCCcccceeC
Q 025302 125 IRIWVKKGGMIVLPAGCYHRFTLD 148 (255)
Q Consensus 125 irI~ve~GDLIvVPAGt~HrFtl~ 148 (255)
-++.+++||.+.||||+.|-.-.+
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~G 181 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCKG 181 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECSS
T ss_pred eEEEcCCCCEEEcCCCCceEecCC
Confidence 368899999999999999987433
No 153
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=70.61 E-value=48 Score=28.06 Aligned_cols=70 Identities=14% Similarity=0.005 Sum_probs=51.1
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeC-CC------cEEEEEEecCCEEEe-CCCCcccceeCC-CCcEEEEEEecCCC
Q 025302 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDR-NE------KWIRIWVKKGGMIVL-PAGCYHRFTLDT-DNYIKAMRLFVGDP 163 (255)
Q Consensus 94 F~~EH~H~d-dEIryIleGsG~Fdvrd~-dd------~wirI~ve~GDLIvV-PAGt~HrFtl~~-~~~vkAiRlF~~~~ 163 (255)
.-..|-|.. -.+..|++|+..-.+=+. ++ ..-...+.+||...+ |++--|+..... +.....+-+|..+-
T Consensus 82 ~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~~avSlHvY~pp~ 161 (200)
T 3eln_A 82 GSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYSPPF 161 (200)
T ss_dssp BCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSCCEEEEEEEESCC
T ss_pred cCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCCCEEEEEeCCCCc
Confidence 356899996 799999999988665221 11 122467899999999 777789987654 56677888887763
No 154
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=70.41 E-value=2.2 Score=40.07 Aligned_cols=23 Identities=17% Similarity=0.193 Sum_probs=20.1
Q ss_pred EEEEecCCEEEeCCCCcccceeC
Q 025302 126 RIWVKKGGMIVLPAGCYHRFTLD 148 (255)
Q Consensus 126 rI~ve~GDLIvVPAGt~HrFtl~ 148 (255)
++.++|||.+.||||+.|-.-.|
T Consensus 241 ~v~l~pGd~~fipAG~~HAy~~G 263 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAYLQG 263 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEEE
T ss_pred EEECCCCCEEEcCCCCceEcCCC
Confidence 58899999999999999987543
No 155
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=68.38 E-value=8.4 Score=29.91 Aligned_cols=44 Identities=11% Similarity=0.129 Sum_probs=34.8
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeC
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~ 148 (255)
..|+-=|++|+..+.+.+ ++.| ....+||-+.||++..-.-...
T Consensus 41 ~~E~M~vvsG~~~V~lpg-~~ew--~~~~aGesF~Vpans~F~l~v~ 84 (94)
T 2oyz_A 41 APERMTVVKGALVVKRVG-EADW--TTYSSGESFDVEGNSSFELQVK 84 (94)
T ss_dssp SCEEEEEEESEEEEEETT-CSSC--EEEETTCEEEECSSEEEEEEES
T ss_pred CeEEEEEEEeEEEEEcCC-CCcC--EEECCCCEEEECCCCEEEEEEc
Confidence 478888999999998863 4567 5689999999999987555443
No 156
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=67.10 E-value=5.7 Score=36.45 Aligned_cols=27 Identities=22% Similarity=0.327 Sum_probs=23.1
Q ss_pred EEEEEEecCCEEEeCCCCcccceeCCC
Q 025302 124 WIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (255)
Q Consensus 124 wirI~ve~GDLIvVPAGt~HrFtl~~~ 150 (255)
.+++.+++||++.||+|-.|.-...+.
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSC
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCC
Confidence 468899999999999999998766554
No 157
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=65.44 E-value=6.6 Score=33.51 Aligned_cols=56 Identities=14% Similarity=0.296 Sum_probs=37.5
Q ss_pred hccccccccCcce---EEEEEe--ceEEEEEEeCC------------------CcEEEEEEecCCEEEeCCCCccccee
Q 025302 92 KNFFEEHLHTDEE---IRYCVA--GSGYFDVRDRN------------------EKWIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 92 ~kF~~EH~H~ddE---IryIle--GsG~Fdvrd~d------------------d~wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
..|+..|.|..-- |+|+-- +.|.+.+.+.. ..+..|.-++||+|+-|+-+.|.-..
T Consensus 113 G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l~H~V~p 191 (216)
T 2rg4_A 113 GGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPM 191 (216)
T ss_dssp TCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTSCEEECC
T ss_pred CCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCCEEeccC
Confidence 4689999998643 334422 23344444321 23457889999999999999998765
No 158
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=64.83 E-value=6.4 Score=37.83 Aligned_cols=29 Identities=28% Similarity=0.475 Sum_probs=23.6
Q ss_pred CcEEEEEEecCCEEEeCCCCcccceeCCC
Q 025302 122 EKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (255)
Q Consensus 122 d~wirI~ve~GDLIvVPAGt~HrFtl~~~ 150 (255)
++++++.+++||.|.||+|-.|.-...++
T Consensus 298 ~~~~~v~l~pGetlfIPsGWwH~V~nled 326 (447)
T 3kv4_A 298 DKCYKCSVKQGQTLFIPTGWIHAVLTPVD 326 (447)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEESSC
T ss_pred cceEEEEECCCcEEecCCCCeEEEecCCC
Confidence 45789999999999999999997544333
No 159
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=63.55 E-value=16 Score=32.81 Aligned_cols=62 Identities=21% Similarity=0.283 Sum_probs=43.3
Q ss_pred ccccccCcce-EEEEE-eceEEEEEEeCCCcEEEEEEecCCEEEeC--CCCcccceeCCCCcEEEEEEec
Q 025302 95 FEEHLHTDEE-IRYCV-AGSGYFDVRDRNEKWIRIWVKKGGMIVLP--AGCYHRFTLDTDNYIKAMRLFV 160 (255)
Q Consensus 95 ~~EH~H~ddE-IryIl-eGsG~Fdvrd~dd~wirI~ve~GDLIvVP--AGt~HrFtl~~~~~vkAiRlF~ 160 (255)
|..|.|.+-| |-|++ +|+..+ +|.-+. .-.+++||+=..= .|+.|-=...++..+..+.|..
T Consensus 53 f~~HPHrg~EtVTyvl~~G~~~H--~DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWv 118 (290)
T 1j1l_A 53 FPDHPHRGFETVSYLLEGGSMAH--EDFCGH--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWV 118 (290)
T ss_dssp EEEEEEBSEEEEEEECSSSCEEE--EETTSC--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEEEE
T ss_pred CCCCCCCCeEEEEEECcceEEEE--eeCCCC--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEEEe
Confidence 7999999955 89999 999765 554343 3568899985554 4577853333445677777765
No 160
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=63.14 E-value=19 Score=26.28 Aligned_cols=35 Identities=9% Similarity=0.063 Sum_probs=26.3
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIv 136 (255)
.+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 46 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 81 (149)
T 2pqq_A 46 GDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIG 81 (149)
T ss_dssp ECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEES
T ss_pred CCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEec
Confidence 3679999999998877765554 4445788999873
No 161
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=62.54 E-value=75 Score=27.30 Aligned_cols=70 Identities=14% Similarity=0.105 Sum_probs=51.0
Q ss_pred cccccccCcceEEEEEeceEEEEE--EeCCCcEE----EEEEecCCEEEeCCC--CcccceeC-CCCcEEEEEEecCCC
Q 025302 94 FFEEHLHTDEEIRYCVAGSGYFDV--RDRNEKWI----RIWVKKGGMIVLPAG--CYHRFTLD-TDNYIKAMRLFVGDP 163 (255)
Q Consensus 94 F~~EH~H~ddEIryIleGsG~Fdv--rd~dd~wi----rI~ve~GDLIvVPAG--t~HrFtl~-~~~~vkAiRlF~~~~ 163 (255)
.-..|-|.---+..|++|+..-.+ +..++... +..+++||.+.++++ --|+-... .+.....+.+|..+-
T Consensus 85 ~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avSLHvYg~pl 163 (211)
T 3uss_A 85 ITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANI 163 (211)
T ss_dssp BCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSCG
T ss_pred cCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCCCEEEEEEcCCCC
Confidence 456899998899999999876544 22233321 267999999999988 68887743 455678888988764
No 162
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=61.52 E-value=4.5 Score=38.43 Aligned_cols=25 Identities=24% Similarity=0.402 Sum_probs=21.9
Q ss_pred CcEEEEEEecCCEEEeCCCCcccce
Q 025302 122 EKWIRIWVKKGGMIVLPAGCYHRFT 146 (255)
Q Consensus 122 d~wirI~ve~GDLIvVPAGt~HrFt 146 (255)
++++++.+++||.+.||+|-.|.-.
T Consensus 241 ~~~~ev~l~pGEtlfIPsGWwH~V~ 265 (392)
T 3pua_A 241 DKCYKCIVKQGQTLFIPSGWIYATL 265 (392)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEE
T ss_pred cceEEEEECCCcEEeeCCCceEEEe
Confidence 3578999999999999999999754
No 163
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=60.87 E-value=17 Score=33.26 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=25.7
Q ss_pred ccccccCc--ceEEEEE---eceEEEEEEeCCCcEEEEEEecCCEEEeCCCCccc
Q 025302 95 FEEHLHTD--EEIRYCV---AGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHR 144 (255)
Q Consensus 95 ~~EH~H~d--dEIryIl---eGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~Hr 144 (255)
|..|+|+. |+.+|+- +|.++-..+ .-|+...+.++-||.+++|.|-+|-
T Consensus 196 yPpHkHDrr~E~yyYF~l~p~~~v~h~~g-~pdEtrh~~V~n~daVlvP~wgyHp 249 (289)
T 1ywk_A 196 MPCHTHERRMEAYVYFDMEEDTRIFHMMG-KPDETKHLVMSNEQAAISPSWSIHS 249 (289)
T ss_dssp --------CEEEEEEESCCTTCCEEEEES-STTSCEEEEECTTEEEEECTTSCCC
T ss_pred CCCccCCCCCeeEEEEEeCCCCeEEEECC-CCCceEEEEEECCCEEEeCCCcccC
Confidence 78999985 4444432 133333333 2344445789999999999998996
No 164
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=60.14 E-value=5 Score=39.61 Aligned_cols=25 Identities=28% Similarity=0.511 Sum_probs=21.8
Q ss_pred CcEEEEEEecCCEEEeCCCCcccce
Q 025302 122 EKWIRIWVKKGGMIVLPAGCYHRFT 146 (255)
Q Consensus 122 d~wirI~ve~GDLIvVPAGt~HrFt 146 (255)
+.++++.+++||.+.||+|-.|.-.
T Consensus 363 ~~~~~v~l~pGEtlfIPsGW~HaV~ 387 (528)
T 3pur_A 363 GAVKRVVIKEGQTLLIPAGWIHAVL 387 (528)
T ss_dssp TCCEEEEEETTCEEEECTTCEEEEE
T ss_pred ccEEEEEECCCCEEEecCCceEEEe
Confidence 4578999999999999999999743
No 165
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=59.98 E-value=5.1 Score=37.77 Aligned_cols=26 Identities=27% Similarity=0.479 Sum_probs=22.4
Q ss_pred CcEEEEEEecCCEEEeCCCCccccee
Q 025302 122 EKWIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 122 d~wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
++++++.+++||.+.||+|-.|.-..
T Consensus 214 ~~~~ev~l~pGEtLfIPsGWwH~V~n 239 (371)
T 3k3o_A 214 DKCYKCSVKQGQTLFIPTGWIHAVLT 239 (371)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEE
T ss_pred CceEEEEECCCcEEEeCCCCeEEEec
Confidence 45789999999999999999997543
No 166
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=59.16 E-value=10 Score=34.88 Aligned_cols=51 Identities=20% Similarity=0.271 Sum_probs=33.6
Q ss_pred ccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcc--cceeCCCCcEEEEEEe
Q 025302 97 EHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYH--RFTLDTDNYIKAMRLF 159 (255)
Q Consensus 97 EH~H~-ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~H--rFtl~~~~~vkAiRlF 159 (255)
+=+|. +-| +||++|+..+ ++ -.+.+|+++.+|||+.- |-.+++.+ +..+ +|
T Consensus 106 ~Gi~~ad~E-~fVL~G~i~~-----G~----~~l~~h~Y~f~PaGV~~~~~kv~~~~g-~~iL-~f 159 (303)
T 2qdr_A 106 SGIFTADLE-IFVIKGAIQL-----GE----WQLNKHSYSFIPAGVRIGSWKVLGGEE-AEIL-WM 159 (303)
T ss_dssp CBEESSCEE-EEEEESEEEE-----TT----EEECTTEEEEECTTCCBCCEEEETTSC-EEEE-EE
T ss_pred CcccccceE-EEEEEeEEEe-----CC----EEecCCceEEecCCCccCceeecCCCC-cEEE-EE
Confidence 44454 446 9999999875 33 25899999999999854 33344433 4444 44
No 167
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=59.03 E-value=4.9 Score=38.41 Aligned_cols=22 Identities=23% Similarity=0.301 Sum_probs=19.6
Q ss_pred EEEEecCCEEEeCCCCccccee
Q 025302 126 RIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 126 rI~ve~GDLIvVPAGt~HrFtl 147 (255)
.|.++|||.|.||||+.|-.--
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred eEecCCCCEEecCCCCccccCC
Confidence 5889999999999999997743
No 168
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=58.37 E-value=12 Score=34.40 Aligned_cols=30 Identities=17% Similarity=0.348 Sum_probs=24.0
Q ss_pred ccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCccc
Q 025302 99 LHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHR 144 (255)
Q Consensus 99 ~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~Hr 144 (255)
+|+.-|=-|+++|.. .+|++..-|+|+.|.
T Consensus 235 iHdy~EEvY~LeG~~----------------d~G~Y~~RPpg~~HG 264 (303)
T 2qdr_A 235 IQPYNEEGYCLTGYC----------------DVGDYRIVKDHYWYC 264 (303)
T ss_dssp EECSCEEEEEEEEEE----------------EETTEEEETTEEEEE
T ss_pred eeccceeEEEEeeec----------------cCceeeEcCCCCccC
Confidence 578766667888754 359999999999997
No 169
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=57.78 E-value=5.1 Score=37.30 Aligned_cols=42 Identities=17% Similarity=0.199 Sum_probs=27.3
Q ss_pred EEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCCCCeee
Q 025302 124 WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 167 (255)
Q Consensus 124 wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~~gWva 167 (255)
++++.=++||++++++|++||.-... +-..+-.=.+++-|..
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G--~~~n~awN~a~~~~~q 319 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATG--WCNNIAWNVGPLTAYQ 319 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESS--SEEEEEEEEESCTTGG
T ss_pred eEEEEECCCCEEEECCCceEEEEecc--eeeEEEEEeCCCcHHH
Confidence 45777889999999999999954322 2233333344555543
No 170
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=56.66 E-value=23 Score=27.55 Aligned_cols=35 Identities=9% Similarity=-0.080 Sum_probs=27.0
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIv 136 (255)
.+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 48 ~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 48 CRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred eeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 3789999999998887666554 4445689999985
No 171
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=56.49 E-value=14 Score=33.77 Aligned_cols=56 Identities=16% Similarity=0.216 Sum_probs=36.2
Q ss_pred ccccccCc--ceEEEEE---eceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCc
Q 025302 95 FEEHLHTD--EEIRYCV---AGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (255)
Q Consensus 95 ~~EH~H~d--dEIryIl---eGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~ 152 (255)
|..|+|+. ||.+|+- +|.+.-.+. ..++-..+.++-||.+++|..=.|- ..+.++|
T Consensus 196 yPpHkHDrr~EeyyYF~l~~~gfv~q~~g-~p~Etrhi~V~n~daVlvP~wh~h~-~~G~~~Y 256 (282)
T 1xru_A 196 MPCHTHERRMEVYFYFNMDDDACVFHMMG-QPQETRHIVMHNEQAVISPSWSIHS-GVGTKAY 256 (282)
T ss_dssp CSEEECTTEEEEEEEESCCTTCCEEEEEE-ETTEEEEEEECSSEEEEECTTCEEE-EEESSCC
T ss_pred CCCccCCCCceEEEEEEeCCCCEEEEEeC-CCCCeeEEEEECCCEEEeCCCCCCC-CCCccce
Confidence 78999985 7777764 244443343 4455556789999999999543443 3344443
No 172
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=56.33 E-value=6.3 Score=38.16 Aligned_cols=43 Identities=21% Similarity=0.273 Sum_probs=32.8
Q ss_pred EEEEEeceEEEEEEeC-------------------------CCcEEEEEEecCCEEEeCCCCccccee
Q 025302 105 IRYCVAGSGYFDVRDR-------------------------NEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 105 IryIleGsG~Fdvrd~-------------------------dd~wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
-..++.|+=.|.+-.. .++++++.+++||.|.||+|-.|.-..
T Consensus 291 w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWwH~V~n 358 (488)
T 3kv5_D 291 WYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAVLT 358 (488)
T ss_dssp EEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCEEEEEE
T ss_pred eeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCceEEeeC
Confidence 3467888877776521 235789999999999999999997543
No 173
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=56.25 E-value=14 Score=33.38 Aligned_cols=37 Identities=30% Similarity=0.368 Sum_probs=29.6
Q ss_pred CcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCc
Q 025302 101 TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCY 142 (255)
Q Consensus 101 ~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~ 142 (255)
....|..+++|+|.... +++ .+.+++||-++|||+..
T Consensus 268 ~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 268 ESFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQMP 304 (319)
T ss_dssp SSCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCC
T ss_pred CccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCCc
Confidence 34689999999998754 233 46799999999999874
No 174
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=55.57 E-value=11 Score=36.38 Aligned_cols=26 Identities=31% Similarity=0.423 Sum_probs=22.4
Q ss_pred cEEEEEEecCCEEEeCCCCcccceeC
Q 025302 123 KWIRIWVKKGGMIVLPAGCYHRFTLD 148 (255)
Q Consensus 123 ~wirI~ve~GDLIvVPAGt~HrFtl~ 148 (255)
+.+++.+++||+|.||+|=.|.-..-
T Consensus 264 ~~~~v~l~pGE~LfIPsGWwH~V~nl 289 (451)
T 2yu1_A 264 DCQRIELKQGYTFVIPSGWIHAVYTP 289 (451)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEECS
T ss_pred cceEEEECCCcEEEeCCCceEEEecC
Confidence 57899999999999999999976543
No 175
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=54.98 E-value=19 Score=26.13 Aligned_cols=63 Identities=16% Similarity=0.084 Sum_probs=35.6
Q ss_pred HHHHHHHHHhcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCc-EE---EEEEecCCE
Q 025302 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WI---RIWVKKGGM 134 (255)
Q Consensus 59 ~~~ld~L~~erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~-wi---rI~ve~GDL 134 (255)
++.+++|... .......++. ..+.+.. ..+.+++|++|.......+.+++ .+ --.+.+||+
T Consensus 19 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~ 83 (142)
T 3mdp_A 19 DEQLKDIALI-----SEEKSFPTGS---------VIFKENS-KADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAI 83 (142)
T ss_dssp HHHHHHHHHT-----EEEEEECTTC---------EEECTTS-BCCEEEEEEESCEEEECC---------CEEEEECTTCE
T ss_pred HHHHHHHHHh-----hcEEecCCCC---------EEEeCCC-CCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCE
Confidence 5667777643 3555555553 1222221 24789999999988776555443 33 346799998
Q ss_pred EE
Q 025302 135 IV 136 (255)
Q Consensus 135 Iv 136 (255)
+-
T Consensus 84 fG 85 (142)
T 3mdp_A 84 FG 85 (142)
T ss_dssp EC
T ss_pred ec
Confidence 84
No 176
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=54.73 E-value=15 Score=31.58 Aligned_cols=41 Identities=12% Similarity=0.209 Sum_probs=33.0
Q ss_pred EEEEeceEEEEEEeC--CCcEEEEEEecCCEEEeCCCCcccce
Q 025302 106 RYCVAGSGYFDVRDR--NEKWIRIWVKKGGMIVLPAGCYHRFT 146 (255)
Q Consensus 106 ryIleGsG~Fdvrd~--dd~wirI~ve~GDLIvVPAGt~HrFt 146 (255)
-+=+-++..|.++.. ++..+++.++.||+++.+.+..+|+.
T Consensus 135 svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~~~H 177 (211)
T 3i3q_A 135 SVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYH 177 (211)
T ss_dssp EEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTTCCE
T ss_pred EEECCCCeEEEEecccCCCceEEEECCCCCEEEECchHHceEe
Confidence 344678999999853 35678999999999999999888763
No 177
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=54.00 E-value=17 Score=35.79 Aligned_cols=44 Identities=16% Similarity=0.152 Sum_probs=29.3
Q ss_pred EEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCCCCeeecC
Q 025302 124 WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFN 169 (255)
Q Consensus 124 wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~~gWva~~ 169 (255)
++++.=++||+|++++|++||.-...- -.++-.=.+++-|.++.
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~--~~n~awN~a~~~~~q~~ 380 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGW--CNNIAWNVGPLTACQYK 380 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSS--EEEEEEEECCSSHHHHH
T ss_pred eEEEEECCCCEEEECCCceEEEEecce--eeeeEEEeccCchHHHH
Confidence 345667899999999999999644332 33344444556676653
No 178
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=53.96 E-value=25 Score=30.54 Aligned_cols=54 Identities=19% Similarity=0.198 Sum_probs=37.7
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEec----CCE--EEeCCCCccccee
Q 025302 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKK----GGM--IVLPAGCYHRFTL 147 (255)
Q Consensus 94 F~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~----GDL--IvVPAGt~HrFtl 147 (255)
+-.||.-.-|||.+...|++...+-+.++...++.+.+ |+. ++||+|+...-..
T Consensus 92 ~S~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~ 151 (203)
T 1xe7_A 92 IGKFHKNINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFL 151 (203)
T ss_dssp EEEEEEESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEE
T ss_pred cccceeeCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEe
Confidence 34567767799999999977665555666665666654 443 8999997665433
No 179
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=53.90 E-value=27 Score=26.66 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=25.8
Q ss_pred EEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCC
Q 025302 125 IRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (255)
Q Consensus 125 irI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~ 162 (255)
++=.+++||+++||+|-.=-..++. .+..+-|.++.
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna 41 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNA 41 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESC
T ss_pred hhceecCCcEEEECCCCceeEEecC--CeEEEEEEecC
Confidence 3456899999999999666555654 37766665555
No 180
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=53.00 E-value=26 Score=29.67 Aligned_cols=50 Identities=10% Similarity=0.042 Sum_probs=37.3
Q ss_pred cccccccCcceEEEEEeceE-EEEEEeCCCcEEEEEEe----cCC---EEEeCCCCcc
Q 025302 94 FFEEHLHTDEEIRYCVAGSG-YFDVRDRNEKWIRIWVK----KGG---MIVLPAGCYH 143 (255)
Q Consensus 94 F~~EH~H~ddEIryIleGsG-~Fdvrd~dd~wirI~ve----~GD---LIvVPAGt~H 143 (255)
+-.||.-.-||+++...|.. .+.+-+.|++..++.+. +|+ -.+||+|+..
T Consensus 65 ~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~Wq 122 (172)
T 3loi_A 65 PDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWF 122 (172)
T ss_dssp CEEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEE
T ss_pred CccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEE
Confidence 45677777799999999976 45555567777777765 577 5899999843
No 181
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=52.65 E-value=23 Score=31.81 Aligned_cols=50 Identities=20% Similarity=0.353 Sum_probs=33.8
Q ss_pred cc-eEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEe
Q 025302 102 DE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 159 (255)
Q Consensus 102 dd-EIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF 159 (255)
.- .|..+++| |.... +++ ...+++||-++|||++.. +++..+ .++.+|.|
T Consensus 247 ~~~~il~v~~G-~~i~~---~~~--~~~l~~G~~~~ipa~~~~-~~i~g~-~~~~~~a~ 297 (300)
T 1zx5_A 247 GVMNILYAAEG-YFILR---GKE--TADLHRGYSCLVPASTDS-FTVESE-RGKIVRIY 297 (300)
T ss_dssp SBCEEEEEEES-CEEEE---SSS--EEEECTTCEEEECTTCCE-EEEEEE-EEEEEEEE
T ss_pred CceEEEEEccc-EEEEe---CCe--EEEEccceEEEEeCCCce-EEEEeC-ceEEEEEE
Confidence 35 88999999 88655 233 357999999999999854 222211 35666655
No 182
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=52.27 E-value=22 Score=33.32 Aligned_cols=52 Identities=19% Similarity=0.320 Sum_probs=35.6
Q ss_pred cCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCCCCcEEEEEEe
Q 025302 100 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 159 (255)
Q Consensus 100 H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF 159 (255)
++...|.++++|+|..... ++ .+.+++||-++|||+..- +++.. ..+.+|.|
T Consensus 340 ~~~~~il~v~~G~~~l~~~---~~--~~~l~~G~~~fvpa~~~~-~~i~g--~~~~~~~~ 391 (394)
T 2wfp_A 340 QHSAAILFCVEGEAVLRKD---EQ--RLVLKPGESAFIGADESP-VNASG--TGRLARVY 391 (394)
T ss_dssp CSSCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECGGGCC-EEEEE--EEEEEEEE
T ss_pred CCCcEEEEEEeceEEEEEC---Ce--EEEEccCcEEEEeCCCce-EEEEe--eeEEEEEE
Confidence 3446899999999986442 32 368999999999998633 33322 25566655
No 183
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=52.11 E-value=58 Score=25.80 Aligned_cols=35 Identities=9% Similarity=0.078 Sum_probs=25.7
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEe
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL 137 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIvV 137 (255)
.+.+++|++|..... .+.+++ .+--.+.+||++-.
T Consensus 45 ~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~ 80 (220)
T 2fmy_A 45 RNLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCT 80 (220)
T ss_dssp SCEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEES
T ss_pred CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCC
Confidence 378999999998874 434444 44457889999866
No 184
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=51.52 E-value=32 Score=32.74 Aligned_cols=57 Identities=19% Similarity=0.334 Sum_probs=37.0
Q ss_pred CcceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCcccceeCC---CCcEEEEEEec
Q 025302 101 TDEEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDT---DNYIKAMRLFV 160 (255)
Q Consensus 101 ~ddEIryIleGsG~Fdvrd~dd-~wirI~ve~GDLIvVPAGt~HrFtl~~---~~~vkAiRlF~ 160 (255)
....|.++++|+|..... ++ +- ...+++||-++|||+..=.++... +..+++.|-|.
T Consensus 378 ~~~~illv~~G~g~i~~~--~~~~~-~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~~~~a~~ 438 (440)
T 1pmi_A 378 NGPSIVIATNGKGTIQIT--GDDST-KQKIDTGYVFFVAPGSSIELTADSANQDQDFTTYRAFV 438 (440)
T ss_dssp SSCEEEEEEESEEEEEET--TCGGG-CEEEETTCEEEECTTCCEEEEECSSCCSSCCEEEEEEC
T ss_pred CCcEEEEEEeCeEEEEeC--Ccccc-eEEeccCCEEEEeCCCcEEEEEecccCCCcEEEEEEEe
Confidence 447899999999998663 22 10 046899999999999433344331 33466666553
No 185
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=51.24 E-value=44 Score=27.36 Aligned_cols=12 Identities=25% Similarity=0.440 Sum_probs=10.5
Q ss_pred EecCCEEEeCCC
Q 025302 129 VKKGGMIVLPAG 140 (255)
Q Consensus 129 ve~GDLIvVPAG 140 (255)
+++||.|.+|.|
T Consensus 111 Lk~GD~v~v~~~ 122 (185)
T 2lcj_A 111 VKEGDKVLVSEL 122 (185)
T ss_dssp CCTTCEEEECCC
T ss_pred CCCCCEEEEccc
Confidence 788999999973
No 186
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=51.02 E-value=48 Score=26.05 Aligned_cols=62 Identities=8% Similarity=-0.035 Sum_probs=39.8
Q ss_pred HHHHHHHHHhcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEE
Q 025302 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (255)
Q Consensus 59 ~~~ld~L~~erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLI 135 (255)
+++++.|... ....++.++. ..+.+.. ..+.+++|++|.......+.+++ .+--.+.+||++
T Consensus 16 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 78 (220)
T 3dv8_A 16 TAQKKLISDN-----LITQHVKKGT---------IIHNGNM-DCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMC 78 (220)
T ss_dssp HHHHHHHHTT-----CEEEEECTTC---------EEEEGGG-CCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred HHHHHHHHhh-----CceEEeCCCC---------EEECCCC-CcceEEEEEeceEEEEEECCCCCEEEEEecCCCCee
Confidence 5667777632 2456666653 1222221 24789999999998887766655 334467899996
No 187
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=50.76 E-value=8.5 Score=36.56 Aligned_cols=26 Identities=27% Similarity=0.470 Sum_probs=22.5
Q ss_pred CcEEEEEEecCCEEEeCCCCccccee
Q 025302 122 EKWIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 122 d~wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
++++++.+++||.+.||+|-.|.-..
T Consensus 242 ~~~~~v~l~pGe~lfIPsGW~H~V~n 267 (397)
T 3kv9_A 242 DKCYKCVVKQGHTLFVPTGWIHAVLT 267 (397)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEE
T ss_pred CceEEEEECCCCEEEeCCCCeEEccC
Confidence 45789999999999999999997543
No 188
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=50.75 E-value=19 Score=28.51 Aligned_cols=42 Identities=19% Similarity=0.334 Sum_probs=33.6
Q ss_pred ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCccccee
Q 025302 103 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 103 dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
.|+-=|++|+..+.+.+ ++.| ....+|+-+.|||+..-....
T Consensus 55 ~E~MevvsG~l~V~LpG-~~eW--~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 55 AETIRVLSGMAYYHAEG-ANDV--QELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp CEEEEEEEEEEEEECTT-CSSC--EEEETTCEEEECSSSCEEEEE
T ss_pred cEEEEEEEeEEEEECCC-CccC--EEECCCCEEEECCCCcEEEEE
Confidence 68888999999988863 3567 568999999999998755443
No 189
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=49.13 E-value=70 Score=24.01 Aligned_cols=34 Identities=9% Similarity=-0.132 Sum_probs=24.9
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIv 136 (255)
.+.+++|++|...... +.+++ .+--.+.+||++-
T Consensus 79 ~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~fG 113 (161)
T 3idb_B 79 GDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSFG 113 (161)
T ss_dssp CCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEEC
T ss_pred CcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEec
Confidence 4789999999988877 44554 3334688999773
No 190
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=49.03 E-value=36 Score=26.49 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=27.0
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEe
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL 137 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIvV 137 (255)
.+.+++|++|.......+.+|+ .+--.+.+||++-.
T Consensus 31 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 67 (207)
T 2oz6_A 31 CETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGE 67 (207)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESC
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCccc
Confidence 3679999999998887666554 44457889998843
No 191
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=48.57 E-value=43 Score=26.38 Aligned_cols=34 Identities=15% Similarity=0.033 Sum_probs=26.6
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLI 135 (255)
.+.+++|++|.......+.+++ .+--.+.+||++
T Consensus 80 ~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 80 GDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 4789999999998887766665 334478999987
No 192
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=48.43 E-value=42 Score=26.23 Aligned_cols=36 Identities=8% Similarity=-0.165 Sum_probs=26.7
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEe
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL 137 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIvV 137 (255)
.+.+++|++|.......+.+++ .+--.+.+||++--
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge 53 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGE 53 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECG
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEech
Confidence 3679999999998877655554 44456889998843
No 193
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=47.52 E-value=70 Score=25.40 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=25.1
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIv 136 (255)
.+.+++|++|..... .+.+++ .+--.+.+||++-
T Consensus 41 ~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG 75 (222)
T 1ft9_A 41 ENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC 75 (222)
T ss_dssp CCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE
T ss_pred CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec
Confidence 367999999998875 444554 4445788999987
No 194
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=46.93 E-value=23 Score=34.88 Aligned_cols=24 Identities=21% Similarity=0.321 Sum_probs=19.7
Q ss_pred EEEEEEecCCEEEeCCCCccccee
Q 025302 124 WIRIWVKKGGMIVLPAGCYHRFTL 147 (255)
Q Consensus 124 wirI~ve~GDLIvVPAGt~HrFtl 147 (255)
++++.=++||++++++|++||.-.
T Consensus 312 vyr~iQkPGdfVit~PgtyH~Vqs 335 (510)
T 4ask_A 312 VYRFVQRPGDLVWINAGTVHWVQA 335 (510)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEe
Confidence 345667899999999999999654
No 195
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=46.14 E-value=43 Score=26.08 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=27.0
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIv 136 (255)
.+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 37 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 37 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp CCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 4789999999999887766655 3444689999984
No 196
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=45.20 E-value=47 Score=26.46 Aligned_cols=44 Identities=14% Similarity=0.223 Sum_probs=35.4
Q ss_pred ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccceeCC
Q 025302 103 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (255)
Q Consensus 103 dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrFtl~~ 149 (255)
.|+-=|++|+....+.+ ++.| ....+|+-+.||++..-.....+
T Consensus 58 ~E~MevvsG~l~V~Lpg-~~eW--~~~~aGesF~VpanssF~lkv~~ 101 (111)
T 3hqx_A 58 PERMEIISGECRVKIAD-STES--ELFRAGQSFYVPGNSLFKIETDE 101 (111)
T ss_dssp CEEEEEEESEEEEEETT-CSSC--EEEETTCEEEECTTCEEEEECSS
T ss_pred cEEEEEEEeEEEEEcCC-cccC--EEeCCCCEEEECCCCcEEEEECc
Confidence 68888999999998863 4567 56899999999999876665543
No 197
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=44.88 E-value=44 Score=27.11 Aligned_cols=38 Identities=13% Similarity=0.216 Sum_probs=26.6
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCC
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPA 139 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVPA 139 (255)
.+.+++|++|.......+.+|+...+..-+||++--.+
T Consensus 36 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~G~~~Ge~~ 73 (238)
T 2bgc_A 36 QEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSG 73 (238)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEESSEEEESB
T ss_pred CceEEEEEecEEEEEEECCCCCEEEEEEcCCCEecchh
Confidence 37799999999988776666653333333899986543
No 198
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=44.68 E-value=39 Score=26.50 Aligned_cols=35 Identities=6% Similarity=0.009 Sum_probs=26.9
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIv 136 (255)
.+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 40 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 75 (216)
T 4ev0_A 40 GQALYLVASGKVRLFRTHLGGQERTLALLGPGELFG 75 (216)
T ss_dssp CCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEEC
T ss_pred CCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 3789999999998887766554 4445689999874
No 199
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=44.35 E-value=22 Score=32.84 Aligned_cols=37 Identities=5% Similarity=0.167 Sum_probs=32.1
Q ss_pred EeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcccc
Q 025302 109 VAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRF 145 (255)
Q Consensus 109 leGsG~Fdvrd~dd~wirI~ve~GDLIvVPAGt~HrF 145 (255)
+-++..|.++..+++.+++.++.||+++.+...++.+
T Consensus 230 LG~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w 266 (345)
T 3tht_A 230 LGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLW 266 (345)
T ss_dssp ESSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTS
T ss_pred CCCceeEEEccCCCceEEEEcCCCcEEEEChHHhhce
Confidence 6679999999777778999999999999999988643
No 200
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=43.86 E-value=44 Score=26.76 Aligned_cols=62 Identities=6% Similarity=0.042 Sum_probs=39.8
Q ss_pred HHHHHHHHHhcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEE
Q 025302 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (255)
Q Consensus 59 ~~~ld~L~~erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLI 135 (255)
+++++.|... ....++.++. ..+.+-. ..+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 24 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 24 EQHVDALLSQ-----AVWRSYDRGE---------TLFLQEE-KAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp HHHHHHHHTT-----CEEEEECTTC---------EEECTTS-CCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred HHHHHHHHhh-----CEEEEECCCC---------EEEcCCC-ccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 5667777633 3456666553 1222211 23689999999998887766655 444567999988
No 201
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=42.44 E-value=43 Score=26.50 Aligned_cols=63 Identities=8% Similarity=0.151 Sum_probs=40.2
Q ss_pred HHHHHHHHHhcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 025302 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (255)
Q Consensus 59 ~~~ld~L~~erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIv 136 (255)
+++++.|... ....++.++. ..+.+-- ..+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 24 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 24 AGTIERFLAH-----SHRRRYPTRT---------DVFRPGD-PAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp HHHHHHHHTT-----SEEEEECTTC---------EEECTTS-BCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred HHHHHHHHHh-----CeEEEeCCCC---------EEECCCC-CCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 6777877642 3455666553 1222211 23789999999998877666554 3445679999983
No 202
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=42.19 E-value=48 Score=26.35 Aligned_cols=35 Identities=9% Similarity=0.113 Sum_probs=26.4
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIv 136 (255)
.+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 82 (227)
T 3d0s_A 47 GDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFG 82 (227)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEe
Confidence 4779999999998887765554 3344688999873
No 203
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=41.08 E-value=19 Score=31.20 Aligned_cols=46 Identities=9% Similarity=0.052 Sum_probs=34.1
Q ss_pred CcEEEEEEecCCEEEeCCCCcccceeC---CCCcEEEEEEecCCCCeee
Q 025302 122 EKWIRIWVKKGGMIVLPAGCYHRFTLD---TDNYIKAMRLFVGDPVWTP 167 (255)
Q Consensus 122 d~wirI~ve~GDLIvVPAGt~HrFtl~---~~~~vkAiRlF~~~~gWva 167 (255)
..++.+.+++||+++.=..+.|+-... .......+++......|.+
T Consensus 213 ~~~v~~~~~aGd~vlf~~~~~H~s~~N~s~~~R~~~~~~y~~~~~~y~~ 261 (308)
T 2a1x_A 213 KARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYID 261 (308)
T ss_dssp SCCEEECBCTTCEEEECTTCCEEECCBCSSSCEEEEEEEEEETTCEECC
T ss_pred CCeEEccCCCccEEEECCCccccCCCCCCCCceEEEEEEEECCCceEcc
Confidence 457889999999999999999997532 2344667777777655554
No 204
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=39.96 E-value=55 Score=27.09 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=27.1
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIv 136 (255)
.+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 87 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 87 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 122 (260)
T ss_dssp CCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEe
Confidence 4789999999998887766555 3445689999984
No 205
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=38.38 E-value=13 Score=32.11 Aligned_cols=37 Identities=11% Similarity=0.341 Sum_probs=30.3
Q ss_pred EEeceEEEEEEeCC----------CcEEEEEEecCCEEEeCCCCccc
Q 025302 108 CVAGSGYFDVRDRN----------EKWIRIWVKKGGMIVLPAGCYHR 144 (255)
Q Consensus 108 IleGsG~Fdvrd~d----------d~wirI~ve~GDLIvVPAGt~Hr 144 (255)
=+.+...|.++... +..++|.++.||+++....+++.
T Consensus 160 SLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r~~ 206 (238)
T 2iuw_A 160 SFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGATQAD 206 (238)
T ss_dssp EEESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEETHHHH
T ss_pred ECCCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEChhhhCc
Confidence 36689999998654 36889999999999999998653
No 206
>3arc_X Photosystem II PSBX protein; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 3prq_X* 3prr_X* 3kzi_X* 3a0b_X* 3a0h_X*
Probab=38.20 E-value=20 Score=23.78 Aligned_cols=19 Identities=37% Similarity=0.564 Sum_probs=15.5
Q ss_pred HHHHHHhhhhHHHhhhhhh
Q 025302 196 LLRNLCNSLLIGSIVLALI 214 (255)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~ 214 (255)
-|.|...||+.|.+|+.+|
T Consensus 5 SL~nFl~Sl~aG~vvvv~i 23 (39)
T 3arc_X 5 SLKGFFIGLLSGAVVLGLT 23 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 4789999999999877664
No 207
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=36.73 E-value=52 Score=28.07 Aligned_cols=34 Identities=12% Similarity=0.005 Sum_probs=27.1
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI 135 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLI 135 (255)
.+.+++|++|.......+.+++.+--.+.+||++
T Consensus 54 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 54 AVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp CCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 4779999999998887766665555678999987
No 208
>2lok_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Halobacterium SP} PDB: 4dlh_A
Probab=36.22 E-value=1.1e+02 Score=26.32 Aligned_cols=80 Identities=11% Similarity=0.144 Sum_probs=53.1
Q ss_pred CCCCcCCHhHHhhc-CeEEEEeCCCCcCCHHHHHHHHHhcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEE
Q 025302 31 DPKEFVSLDQLSEL-GVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCV 109 (255)
Q Consensus 31 ~p~~~vs~~~L~~l-GV~yw~~d~~~~e~~~~ld~L~~erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIl 109 (255)
+|..+++.+++++. |+.|+..|+. |...-.++-.++. +.+-.+.. ++-+..|..
T Consensus 33 ~p~sPl~~~~r~~F~Gl~~fp~Dp~----------------wrv~a~~~p~~~~--------~~~~v~t~-~g~~~~~~~ 87 (197)
T 2lok_A 33 HDQSPIPPADRGAFDGLRYFDIDAS----------------FRVAARYQPARDP--------EAVELETT-RGPPAEYTR 87 (197)
T ss_dssp CTTSCCCHHHHHTCCCCCCCCCCST----------------TEEEEEEEECSSC--------CEEEEBCS-SSSCEEEEE
T ss_pred CccCCCChhHHhcCCCCccCCCCCC----------------EEEEEEEEECCCC--------cEEEEEec-CCceEEEEE
Confidence 45667778888876 9999877752 4444444444332 23334454 678889999
Q ss_pred eceEEEEEEeCCCcEEEEEE---ecCCEEEeC
Q 025302 110 AGSGYFDVRDRNEKWIRIWV---KKGGMIVLP 138 (255)
Q Consensus 110 eGsG~Fdvrd~dd~wirI~v---e~GDLIvVP 138 (255)
-|...|.+. |+.+++.+ +.|+-+.||
T Consensus 88 ~G~v~F~l~---G~~~~L~~~~~~~~~~Lflp 116 (197)
T 2lok_A 88 AAVLGFDLG---DSHHTLTAFRVEGESSLFVP 116 (197)
T ss_dssp EEEEEEEET---TEEEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEC---CEEEEEEEEecCCCCeEEEE
Confidence 999999884 56666666 566767766
No 209
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=35.83 E-value=48 Score=26.75 Aligned_cols=65 Identities=8% Similarity=0.087 Sum_probs=39.3
Q ss_pred HHHHHHHHHhcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 025302 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (255)
Q Consensus 59 ~~~ld~L~~erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIv 136 (255)
++++++|....+ ....++.++. ..+.+-- ..+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 31 ~~~~~~l~~~~~---~~~~~~~~ge---------~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG 96 (232)
T 1zyb_A 31 HEDFTSILDKVK---LHFIKHKAGE---------TIIKSGN-PCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIE 96 (232)
T ss_dssp HHHHHHHHHTSC---CEEEEECTTC---------EEECTTS-BCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEEC
T ss_pred HHHHHHHHhhCC---cEEEEECCCC---------EEECCCC-cccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeee
Confidence 677888875411 2455555543 1122111 24789999999998776554443 4445678999873
No 210
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=35.33 E-value=22 Score=26.19 Aligned_cols=34 Identities=9% Similarity=0.008 Sum_probs=23.1
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLI 135 (255)
.+.+++|++|.......+.+++ .+--.+.+||++
T Consensus 53 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 53 AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred cceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 4779999999998776544443 334468899987
No 211
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=35.21 E-value=64 Score=26.26 Aligned_cols=34 Identities=6% Similarity=0.117 Sum_probs=26.3
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLI 135 (255)
.+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 61 ~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~ 95 (243)
T 3la7_A 61 AERVYFLLKGAVKLSRVYEAGEEITVALLRENSVF 95 (243)
T ss_dssp CCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEE
T ss_pred CceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEE
Confidence 3789999999998877666554 444568899987
No 212
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=35.14 E-value=1.6e+02 Score=22.89 Aligned_cols=56 Identities=13% Similarity=0.135 Sum_probs=35.2
Q ss_pred ceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEeC--CCCcccceeCCCCcEEEEEE
Q 025302 103 EEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLP--AGCYHRFTLDTDNYIKAMRL 158 (255)
Q Consensus 103 dEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIvVP--AGt~HrFtl~~~~~vkAiRl 158 (255)
+.+++|++|.......+.+++ .+--.+.+||++-.+ .|..+.++.......+.+++
T Consensus 26 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~i 84 (202)
T 2zcw_A 26 DRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEPL 84 (202)
T ss_dssp CCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEEC
T ss_pred CeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEEE
Confidence 678999999998877655554 444468899988541 12333344433344566665
No 213
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=34.37 E-value=83 Score=24.97 Aligned_cols=62 Identities=8% Similarity=0.111 Sum_probs=38.7
Q ss_pred HHHHHHHHHhcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEE
Q 025302 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (255)
Q Consensus 59 ~~~ld~L~~erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLI 135 (255)
++++++|... ....++.++. ..+.+- -..+.+++|++|.......+.+++ .+--.+.+||++
T Consensus 19 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G-~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 81 (231)
T 3e97_A 19 EDAMREALKV-----VTERNFQPDE---------LVVEQD-AEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVV 81 (231)
T ss_dssp HHHHHHHHHT-----EEEEEECTTC---------BCCCTT-CTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEE
T ss_pred HHHHHHHHHh-----cEEEEECCCC---------EEEeCC-CCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEE
Confidence 5677777643 3566666653 112221 124789999999998877655554 444578999987
No 214
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=33.38 E-value=72 Score=25.93 Aligned_cols=36 Identities=11% Similarity=0.085 Sum_probs=27.0
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEe
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL 137 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLIvV 137 (255)
.+.+++|++|.......+.+|+ .+--.+.+||++-.
T Consensus 50 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~ 86 (250)
T 3e6c_C 50 ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGK 86 (250)
T ss_dssp CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECC
T ss_pred CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEee
Confidence 3789999999998877766655 34446889999843
No 215
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=32.57 E-value=71 Score=26.58 Aligned_cols=70 Identities=16% Similarity=0.191 Sum_probs=44.4
Q ss_pred HhcCCCeeeEEEECCCCCCChHHHhhcccccccc-CcceEEEEEeceE-EEEEEeCCCcEEEEEEe----cCCE--EEeC
Q 025302 67 EDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLH-TDEEIRYCVAGSG-YFDVRDRNEKWIRIWVK----KGGM--IVLP 138 (255)
Q Consensus 67 ~erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H-~ddEIryIleGsG-~Fdvrd~dd~wirI~ve----~GDL--IvVP 138 (255)
..|...+.=-+-+.++. +-.||.- .-|||.+...|.. ...+-+.++..-++.+. +|+. ++||
T Consensus 35 ~~R~~~TaIYfLL~~g~----------~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~pQ~vVP 104 (154)
T 1znp_A 35 GERGHSTAIYYLLEKGV----------RSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGERPQVIVP 104 (154)
T ss_dssp TTTCSCEEEEEEEESSC----------CEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEESEEEEC
T ss_pred CCCcceeEEEEEecCCC----------CCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcccEEEEc
Confidence 35666555555555432 4568886 7799999999974 44444445555455564 3554 8999
Q ss_pred CCCcccce
Q 025302 139 AGCYHRFT 146 (255)
Q Consensus 139 AGt~HrFt 146 (255)
+|+...-.
T Consensus 105 ~G~WqaA~ 112 (154)
T 1znp_A 105 ANCWQSAE 112 (154)
T ss_dssp TTCEEEEE
T ss_pred CCEEEEee
Confidence 99765443
No 216
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=31.51 E-value=62 Score=25.38 Aligned_cols=31 Identities=10% Similarity=0.126 Sum_probs=23.4
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI 135 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLI 135 (255)
.+.+++|++|+..... .+++ +--.+++||++
T Consensus 112 ~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 112 GDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred CcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 4679999999987665 4555 34578899987
No 217
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=30.79 E-value=54 Score=26.05 Aligned_cols=34 Identities=18% Similarity=0.024 Sum_probs=25.4
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLI 135 (255)
.+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 40 ~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 40 IEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred cceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 3679999999998877655554 334467899987
No 218
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=30.48 E-value=50 Score=26.32 Aligned_cols=62 Identities=16% Similarity=0.145 Sum_probs=35.7
Q ss_pred HHHHHHHHHhcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEE
Q 025302 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMI 135 (255)
Q Consensus 59 ~~~ld~L~~erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~-wirI~ve~GDLI 135 (255)
++++++|... ....++.++. ..+.+.. ..+.+++|++|.......+.+++ .+--.+.+||++
T Consensus 23 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 23 EEERELLDKE-----IQPFPCKKAS---------TVFSEGD-IPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFF 85 (232)
T ss_dssp HHHHHHHHHH-----CEEEEECTTC---------EEECTTC-CCCEEEEEEESCEEEEC-----CCCEEEEECTTCEE
T ss_pred HHHHHHHHhh-----CeEEEECCCC---------EEEeCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 5677777652 3555555553 1222211 23679999999988765544333 344578899987
No 219
>2lnu_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Haloarcula marismortui}
Probab=30.41 E-value=1.3e+02 Score=25.72 Aligned_cols=80 Identities=15% Similarity=0.233 Sum_probs=50.6
Q ss_pred CCCCcCCHhHHhhc-CeEEEEeCCCCcCCHHHHHHHHHhcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEE
Q 025302 31 DPKEFVSLDQLSEL-GVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCV 109 (255)
Q Consensus 31 ~p~~~vs~~~L~~l-GV~yw~~d~~~~e~~~~ld~L~~erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIl 109 (255)
+|..+++.++++.. |+.|+..|+. |...-.++-.++. +.+-.+.. ++-+..|..
T Consensus 26 ~p~sPl~~~~r~~F~Gl~~fp~Dp~----------------wrv~a~~~~~~~~--------~~~~v~t~-~g~~~~~~~ 80 (190)
T 2lnu_A 26 HRQSPIPPEERDDFDGLSYFDPDPD----------------YRVEATVTVHETP--------ESVDLETS-DDRTVRYLH 80 (190)
T ss_dssp TSCCCSCTTHHHHCCSCCCCCCCGG----------------GEEEEEEEECSSC--------CEEEEECS-SSSEEEEEE
T ss_pred CccCCCChhHHhcCCCCccCCCCCC----------------EEEEEEEEECCCC--------cEEEEEec-CCceEEEEE
Confidence 35556667888776 9999877642 3333344444332 23334445 678889999
Q ss_pred eceEEEEEEeCCCcEEEEEE-----ecCCEEEeC
Q 025302 110 AGSGYFDVRDRNEKWIRIWV-----KKGGMIVLP 138 (255)
Q Consensus 110 eGsG~Fdvrd~dd~wirI~v-----e~GDLIvVP 138 (255)
-|...|.+. |+.+++.+ +.|+-+.||
T Consensus 81 ~G~~~F~l~---G~~~~L~~~~~~~~~~~~Lflp 111 (190)
T 2lnu_A 81 VATLSFDLD---GESRDLHAFRQAADESRTLFVP 111 (190)
T ss_dssp EEEEEEEET---TEEEEEEEEESSSCCSCCEEEE
T ss_pred eEEEEEEEC---CEEEEEEEEecccCCCCeEEEE
Confidence 999999884 56666666 345655555
No 220
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=29.84 E-value=89 Score=23.27 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=23.0
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI 135 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLI 135 (255)
.+.+++|++|...... +++.+. .+.+||++
T Consensus 79 ~~~~y~i~~G~v~~~~---~~~~~~-~~~~G~~f 108 (154)
T 3pna_A 79 GDNFYVIDQGEMDVYV---NNEWAT-SVGEGGSF 108 (154)
T ss_dssp CCEEEEEEESCEEEEE---TTEEEE-EECTTCEE
T ss_pred CCeEEEEEecEEEEEE---CCEEEE-EecCCCEe
Confidence 4789999999988765 455444 58999987
No 221
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=29.10 E-value=1e+02 Score=25.36 Aligned_cols=33 Identities=12% Similarity=-0.033 Sum_probs=25.0
Q ss_pred ceEEEEEeceEEEEEEeCCC--cEEEEEEecCCEE
Q 025302 103 EEIRYCVAGSGYFDVRDRNE--KWIRIWVKKGGMI 135 (255)
Q Consensus 103 dEIryIleGsG~Fdvrd~dd--~wirI~ve~GDLI 135 (255)
+.+++|++|+........++ ...--.+.+||++
T Consensus 199 ~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 199 DEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred CEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 67999999998887654443 2455678999998
No 222
>4dsd_A Putative periplasmic protein; BLIP-like fold, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; 1.75A {Bacteroides ovatus}
Probab=28.74 E-value=74 Score=25.08 Aligned_cols=55 Identities=20% Similarity=0.355 Sum_probs=29.3
Q ss_pred eEEEECCCCCCChHHHhhccccccccCcceEEEEEece----EEEEEE---------eCCCcEEEEEEecC
Q 025302 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGS----GYFDVR---------DRNEKWIRIWVKKG 132 (255)
Q Consensus 75 DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGs----G~Fdvr---------d~dd~wirI~ve~G 132 (255)
|..+|.+..+| +....|...|.-...-+..-.+.. +.|.|. |.+|.|..|.++.+
T Consensus 3 ~d~~i~~~~LP---~~a~~fi~~~Fp~~~i~~ve~e~~~~~~~~YeV~l~~G~ei~Fd~~G~W~ev~~~~~ 70 (129)
T 4dsd_A 3 DVITKDMNQLP---LPARNFINSNFTKPQVAHIKIDKDMMESTKYEVVLMDGTEIDFDSKGNWEEVSAKKG 70 (129)
T ss_dssp CEEECCGGGSC---HHHHHHHHHHSSSCCEEEEEEEECTTSCEEEEEEETTSCEEEECTTSCEEEEECCTT
T ss_pred CceEcChhhCC---HHHHHHHHHHCCCCceEEEEEecCcCCCccEEEEECCCcEEEEeCCCCEEEEecCcC
Confidence 55667777666 555566666654433333333321 344443 24667777776555
No 223
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=28.66 E-value=35 Score=28.77 Aligned_cols=39 Identities=13% Similarity=0.235 Sum_probs=30.7
Q ss_pred EEEEeceEEEEEEeCC---------CcEEEEEEecCCEEEeCCCCccc
Q 025302 106 RYCVAGSGYFDVRDRN---------EKWIRIWVKKGGMIVLPAGCYHR 144 (255)
Q Consensus 106 ryIleGsG~Fdvrd~d---------d~wirI~ve~GDLIvVPAGt~Hr 144 (255)
-+=+-++..|.++..+ +..+++.++.||+++.+.++.+.
T Consensus 132 svSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~~ 179 (204)
T 3s57_A 132 SVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTH 179 (204)
T ss_dssp EEEEESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETTHHHH
T ss_pred EEECCCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECchhhhe
Confidence 3446789999998542 24678999999999999998773
No 224
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=27.93 E-value=1.1e+02 Score=22.46 Aligned_cols=43 Identities=7% Similarity=0.013 Sum_probs=29.4
Q ss_pred HhHHhhcCeEEEEeCCCCcCCHHHHHHHHHh-cCCCeeeEEEECCC
Q 025302 38 LDQLSELGVLSWRLDADNYETDEELKKIRED-RGYSYMDFCEVCPE 82 (255)
Q Consensus 38 ~~~L~~lGV~yw~~d~~~~e~~~~ld~L~~e-rGY~~~DvVtlsp~ 82 (255)
-+.|++.||.|-.+|.+. ..+..+.+.+. .|.++.=+|.+.-+
T Consensus 21 K~~L~~~gi~y~~idi~~--d~~~~~~~~~~~~G~~tVP~I~i~Dg 64 (92)
T 2lqo_A 21 KTALTANRIAYDEVDIEH--NRAAAEFVGSVNGGNRTVPTVKFADG 64 (92)
T ss_dssp HHHHHHTTCCCEEEETTT--CHHHHHHHHHHSSSSSCSCEEEETTS
T ss_pred HHHHHhcCCceEEEEcCC--CHHHHHHHHHHcCCCCEeCEEEEeCC
Confidence 467899999997777653 23444555543 38888888888533
No 225
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=27.77 E-value=51 Score=31.42 Aligned_cols=37 Identities=24% Similarity=0.300 Sum_probs=26.0
Q ss_pred EEEEEecCCEEEeCCCCcccceeCCCCcEE-EEEEecCC
Q 025302 125 IRIWVKKGGMIVLPAGCYHRFTLDTDNYIK-AMRLFVGD 162 (255)
Q Consensus 125 irI~ve~GDLIvVPAGt~HrFtl~~~~~vk-AiRlF~~~ 162 (255)
+.+.=++||.|+||||-+|--..-.+ -++ |.-|++.+
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~-~i~va~df~spe 330 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHS-CIQVTEDFVSPE 330 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSE-EEEEEEEECCGG
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccc-hhhHhhhhcChh
Confidence 46888999999999999997654333 344 44444443
No 226
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=27.71 E-value=1e+02 Score=27.33 Aligned_cols=67 Identities=19% Similarity=0.223 Sum_probs=43.3
Q ss_pred hcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceE-EEEEEeCCC------------------------
Q 025302 68 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSG-YFDVRDRNE------------------------ 122 (255)
Q Consensus 68 erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG-~Fdvrd~dd------------------------ 122 (255)
.|...+.=-+-+.++. +-.||.-.-||+++...|.. .+.+-+.|+
T Consensus 56 ~R~~~TaIYfLL~~g~----------~S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~ 125 (225)
T 3m3i_A 56 RRHAYTTIYFLCTPES----------PSHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADAR 125 (225)
T ss_dssp EEESCEEEEEEECSSS----------CEEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC------------------C
T ss_pred CcccceeEEEEecCCC----------CcccEEecCCEEEEEECCCCEEEEEEcCCCcccccccccccccccccccccccc
Confidence 3555555555666553 35577767799999999986 444444455
Q ss_pred ----cEEEEEEe----cCCE--EEeCCCCccc
Q 025302 123 ----KWIRIWVK----KGGM--IVLPAGCYHR 144 (255)
Q Consensus 123 ----~wirI~ve----~GDL--IvVPAGt~Hr 144 (255)
..-++.+. +|+. .+||+|+...
T Consensus 126 ~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~Wqa 157 (225)
T 3m3i_A 126 PKYQVYRRVLVGARVERGELLQYTVPGGAIFG 157 (225)
T ss_dssp CSSCEEEEEEESSCGGGTCBSEEEECTTCEEE
T ss_pred cccCceEEEEeCCCccCCceeEEEeCCCEEEE
Confidence 44556663 4664 7999998443
No 227
>3bz1_X Photosystem II PSBX protein; electron transport photosystem, membrane complex, transmembrane alpha-helix; HET: CLA PHO HEM PL9 BCR DGD LHG SQD LMG LMT; 2.90A {Thermosynechococcus elongatus} PDB: 1s5l_X* 3bz2_X*
Probab=26.66 E-value=39 Score=23.52 Aligned_cols=20 Identities=35% Similarity=0.496 Sum_probs=15.9
Q ss_pred HHHHHHHhhhhHHHhhhhhh
Q 025302 195 MLLRNLCNSLLIGSIVLALI 214 (255)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~ 214 (255)
--|.|...||+.|.+|+.+|
T Consensus 14 pSL~NFl~SlvaG~vVvv~i 33 (50)
T 3bz1_X 14 PSLKGFFIGLLSGAVVLGLT 33 (50)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999877654
No 228
>2cw8_A Endonuclease PI-pkoii; hydrolase; 2.50A {Thermococcus kodakarensis} PDB: 2cw7_A
Probab=26.13 E-value=56 Score=31.40 Aligned_cols=16 Identities=19% Similarity=0.374 Sum_probs=13.6
Q ss_pred EecCCEEEeCCCCccc
Q 025302 129 VKKGGMIVLPAGCYHR 144 (255)
Q Consensus 129 ve~GDLIvVPAGt~Hr 144 (255)
+++||.|.+|..+.+-
T Consensus 114 lk~GD~v~~~~~~~~~ 129 (537)
T 2cw8_A 114 LKPGDLVAVPRRLELP 129 (537)
T ss_dssp CCTTCEEEEESCCCCC
T ss_pred CCCCCEEEEeeecCCc
Confidence 6789999999988764
No 229
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=25.96 E-value=1.3e+02 Score=21.96 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=24.1
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeC
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLP 138 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVP 138 (255)
.+.+++|++|...... ++. +--.+.+||++--.
T Consensus 68 ~~~~y~i~~G~v~~~~---~~~-~~~~~~~G~~fG~~ 100 (160)
T 4f8a_A 68 VDSLCFVVSGSLEVIQ---DDE-VVAILGKGDVFGDV 100 (160)
T ss_dssp CCEEEEEEESEEEEEE---TTE-EEEEEETTCEEECC
T ss_pred ccEEEEEEeeEEEEEE---CCE-EEEEecCCCEeCcH
Confidence 4789999999988755 233 34578899998543
No 230
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=24.92 E-value=1.2e+02 Score=25.21 Aligned_cols=33 Identities=18% Similarity=0.095 Sum_probs=24.5
Q ss_pred ceEEEEEeceEEEEEEe-CCC-cEEEEEEecCCEE
Q 025302 103 EEIRYCVAGSGYFDVRD-RNE-KWIRIWVKKGGMI 135 (255)
Q Consensus 103 dEIryIleGsG~Fdvrd-~dd-~wirI~ve~GDLI 135 (255)
+.+++|++|+......+ .++ ..+--.+.+||++
T Consensus 199 ~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 199 DTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp CEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred CEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 67899999999887764 233 3444578999987
No 231
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=24.59 E-value=2.5e+02 Score=25.13 Aligned_cols=69 Identities=14% Similarity=0.103 Sum_probs=43.2
Q ss_pred hcCCCeeeEEEECCCCCCChHHHhhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEec--------CCEEEeCC
Q 025302 68 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKK--------GGMIVLPA 139 (255)
Q Consensus 68 erGY~~~DvVtlsp~~~Pn~e~k~~kF~~EH~H~ddEIryIleGsG~Fdvrd~dd~wirI~ve~--------GDLIvVPA 139 (255)
.-.|..-+++.|.++.. +...+-..|=..+.+.|++.+.+. ++.+...... .|-+.||.
T Consensus 25 ~~~y~~f~~~~L~~Ge~----------~~~~~~~~E~~iv~l~G~~~V~~~---g~~~~~~g~R~svF~~~~p~~lYvp~ 91 (270)
T 2qjv_A 25 GWEYVGFDVWQLXAGES----------ITLPSDERERCLVLVAGLASVXAA---DSFFYRIGQRMSPFERIPAYSVYLPH 91 (270)
T ss_dssp TSSSCEEEEEEECTTCE----------EEECCSSEEEEEEEEESCEEEEET---TEEEEEECCCSSGGGCSCCCEEEECS
T ss_pred CcEEeEEEEEEecCCCE----------EEecCCCcEEEEEEecceEEEEEC---CEEEeccccccccccCCCCcEEEECC
Confidence 34566678888887641 222222335556668899988774 4433333333 59999999
Q ss_pred CCcccceeCC
Q 025302 140 GCYHRFTLDT 149 (255)
Q Consensus 140 Gt~HrFtl~~ 149 (255)
|..=.|+..+
T Consensus 92 g~~v~i~a~~ 101 (270)
T 2qjv_A 92 HTEAXVTAET 101 (270)
T ss_dssp SCCEEEEESS
T ss_pred CCEEEEEecC
Confidence 9966666654
No 232
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=23.08 E-value=75 Score=25.05 Aligned_cols=30 Identities=10% Similarity=0.152 Sum_probs=21.9
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEE
Q 025302 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI 135 (255)
Q Consensus 102 ddEIryIleGsG~Fdvrd~dd~wirI~ve~GDLI 135 (255)
.+.++||++|...... .+++. ..+.+||++
T Consensus 113 ~~~ly~I~~G~v~v~~--~~g~~--~~l~~G~~f 142 (202)
T 3bpz_A 113 GKKMYFIQHGVVSVLT--KGNKE--MKLSDGSYF 142 (202)
T ss_dssp CCEEEEEEECEEEEEC--TTSCC--EEEETTCEE
T ss_pred CCeEEEEeccEEEEEE--CCCeE--EEEcCCCEe
Confidence 3689999999987643 34443 358999987
No 233
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=22.71 E-value=1.4e+02 Score=21.56 Aligned_cols=52 Identities=8% Similarity=-0.033 Sum_probs=30.5
Q ss_pred ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeC---CCCccccee-CCCCcEEEEEE
Q 025302 103 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLP---AGCYHRFTL-DTDNYIKAMRL 158 (255)
Q Consensus 103 dEIryIleGsG~Fdvrd~dd~wirI~ve~GDLIvVP---AGt~HrFtl-~~~~~vkAiRl 158 (255)
+.+++|++|...... .+++. ..+.+||++-.- .+..+.++. ........+++
T Consensus 59 ~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~fG~~~~~~~~~~~~~~~~a~~~~~~~~i 114 (134)
T 2d93_A 59 DSWYVILNGTVEISH--PDGKV--ENLFMGNSFGITPTLDKQYMHGIVRTKVDDCQFVCI 114 (134)
T ss_dssp CEEEECCBSCEEEEC--SSSCE--EEECTTCEESCCSSSCCEECCSEEEESSSSEEEEEE
T ss_pred CeEEEEEeCEEEEEc--CCCcE--EEecCCCccChhHhcCCCcceeEEEEEecceEEEEE
Confidence 679999999988653 44544 448899987322 233333344 33344454544
No 234
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=21.89 E-value=42 Score=23.31 Aligned_cols=35 Identities=9% Similarity=-0.006 Sum_probs=17.5
Q ss_pred EEEecCCEEEeCCCCcccceeCCCCcEEEEEEecCCCCeeec
Q 025302 127 IWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPF 168 (255)
Q Consensus 127 I~ve~GDLIvVPAGt~HrFtl~~~~~vkAiRlF~~~~gWva~ 168 (255)
+.+++||+|.|= ...++....+...-.+..||.|-
T Consensus 23 Ls~~~Gd~i~v~-------~~~~~gWw~g~~~~~g~~G~~P~ 57 (65)
T 2lj0_A 23 LELRDGDIVDVM-------EKCDDGWFVGTSRRTKQFGTFPG 57 (65)
T ss_dssp CCBCTTCEEEEE-------EECTTSEEEEEETTTCCEEEEET
T ss_pred cCCCCCCEEEEe-------EeCCCCEEEEEECCCCCEEEEeh
Confidence 566777776652 11222333333333456677764
No 235
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=20.34 E-value=1.5e+02 Score=20.39 Aligned_cols=53 Identities=9% Similarity=-0.038 Sum_probs=34.2
Q ss_pred HhHHhhcCeEEEEeCCCCc---CCHHHHHHHHHhcCCC-----eeeEEEE-CCCCCCChHHH
Q 025302 38 LDQLSELGVLSWRLDADNY---ETDEELKKIREDRGYS-----YMDFCEV-CPEKLPNYEEK 90 (255)
Q Consensus 38 ~~~L~~lGV~yw~~d~~~~---e~~~~ld~L~~erGY~-----~~DvVtl-sp~~~Pn~e~k 90 (255)
.+.|++.||.|-.++.+.. +..+..++|++..|+. +.=+|.+ ..+.+..+++.
T Consensus 21 k~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~~igG~d~l 82 (87)
T 1aba_A 21 KRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGGFDQL 82 (87)
T ss_dssp HHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEESHHHH
T ss_pred HHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCEEEeCHHHH
Confidence 4678899999977777632 1234557788788887 6666666 54433445543
Done!