BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025303
(255 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q945M9|NFYA9_ARATH Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana
GN=NFYA9 PE=2 SV=1
Length = 303
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 98/142 (69%), Gaps = 8/142 (5%)
Query: 46 ELVGHSI-VLTSYPYTDPQHVGVITPYV--PQAMIPPQLYGMHQARMPLPLEMEEEPVYV 102
+LVGH++ +S PY DP + GV+ Y P +P GM +RMPLP EM +EPV+V
Sbjct: 113 QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVP--YGGMPHSRMPLPPEMAQEPVFV 170
Query: 103 NAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKLNDN 162
NAKQY+ ILRRRQ+RAKAELEKK+IK+RKPYLHESRHQHAMRR RG GGRF KK N
Sbjct: 171 NAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF--AKKTNTE 228
Query: 163 AAN-SAEKGMNSGADSSKGSTN 183
A+ AE+ N S S+N
Sbjct: 229 ASKRKAEEKSNGHVTQSPSSSN 250
>sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana
GN=NFYA1 PE=2 SV=1
Length = 272
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 95/144 (65%), Gaps = 10/144 (6%)
Query: 46 ELVGHSIVLTSYPYTDPQHVGVITPYVPQAMIPPQLYGMHQARMPLPLEMEEEPVYVNAK 105
ELVGH I PY DP + G++ Y Q + GM + R LPL+M +EPVYVNAK
Sbjct: 120 ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAK 179
Query: 106 QYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKLNDNAAN 165
QY GILRRR++RAKAELE+KVI+ RKPYLHESRH+HAMRRAR GGRF ++
Sbjct: 180 QYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEV------ 233
Query: 166 SAEKGMNSGA-DSSKGS-TNGTGS 187
E G ++G D +GS TN +GS
Sbjct: 234 --EAGEDAGGRDRERGSATNSSGS 255
>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana
GN=NFYA7 PE=2 SV=1
Length = 190
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 57 YPYTDPQHVGVITPYV-PQAMIPPQLYGMHQARMPLPLEMEEEPVYVNAKQYRGILRRRQ 115
YPY DP + + P P + QL G+ Q +PLP + EEPV+VNAKQY GILRRRQ
Sbjct: 58 YPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQ 117
Query: 116 SRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKLNDNAANSA--EKGMNS 173
SRA+ E + KVIK+RKPYLHESRH HA+RR RGCGGRFLN KK +++ +S+ EK S
Sbjct: 118 SRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSHEEKSNLS 177
Query: 174 GADSSKGSTNGT 185
S+ +++GT
Sbjct: 178 AGKSAMAASSGT 189
>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana
GN=NFYA3 PE=2 SV=2
Length = 340
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 79/107 (73%), Gaps = 3/107 (2%)
Query: 56 SYPYTDPQHVGVITP-YVPQA-MIPPQLYGMHQARMPLPLEMEE-EPVYVNAKQYRGILR 112
S+ Y DP + G++ Y+PQA PQ+ M R+PLP E+ E +PV+VNAKQY I+R
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMR 193
Query: 113 RRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKL 159
RRQ RAK E + K+I+ARKPYLHESRH HA++R RG GGRFLNTKKL
Sbjct: 194 RRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKL 240
>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana
GN=NFYA4 PE=2 SV=1
Length = 198
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 86/131 (65%), Gaps = 6/131 (4%)
Query: 57 YPYTDPQHVGVIT--PYVPQAM--IPPQLYGMHQARMPLPLEMEEEPVYVNAKQYRGILR 112
YPY DP + V Y+P + QL GM Q +PL + EEPV+VNAKQY GILR
Sbjct: 53 YPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILR 112
Query: 113 RRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKLNDNAANSAEKGMN 172
RRQSRAK E + IKA+KPY+HESRH HA+RR RGCGGRFLN KK +N + E+
Sbjct: 113 RRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKK--ENGDHKEEEEAT 170
Query: 173 SGADSSKGSTN 183
S ++S+ S++
Sbjct: 171 SDENTSEASSS 181
>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana
GN=NFYA8 PE=2 SV=2
Length = 328
Score = 127 bits (320), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 8/111 (7%)
Query: 56 SYPYTDPQHVGVITP--YVPQAMIPPQLYGMHQARMPLPLEM-EEEPVYVNAKQYRGILR 112
S+ Y DP H G + P Y+PQA I + R+PLP ++ E EPV+VNAKQ+ I+R
Sbjct: 132 SFHYADP-HFGGLMPAAYLPQATI----WNPQMTRVPLPFDLIENEPVFVNAKQFHAIMR 186
Query: 113 RRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKLNDNA 163
RRQ RAK E + K+IKARKPYLHESRH HA++R RG GGRFLNTKKL ++
Sbjct: 187 RRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQEST 237
>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana
GN=NFYA5 PE=2 SV=1
Length = 308
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Query: 72 VPQAMIPPQLYGMHQARMPLPLEMEE-EPVYVNAKQYRGILRRRQSRAKAELEKKVIKAR 130
P A+ ++ G+ +R+PLP ++E EP++VNAKQY ILRRR+ RAK E + K+IK R
Sbjct: 151 TPTALPHLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCR 210
Query: 131 KPYLHESRHQHAMRRARGCGGRFLNTKKLNDNAANSAEKGMNSGADSS 178
KPYLHESRH HA++RARG GGRFLNTKKL +++ + M +G + S
Sbjct: 211 KPYLHESRHLHALKRARGSGGRFLNTKKLQESSNSLCSSQMANGQNFS 258
>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana
GN=NFYA6 PE=2 SV=1
Length = 308
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 80/118 (67%), Gaps = 10/118 (8%)
Query: 51 SIVL----TSYPY---TDPQHVGVIT-PYVPQAMIP-PQLYGMHQARMPLPLEM-EEEPV 100
S+VL S+P P G ++ PY Q + PQ+ G+ +RMPLP + E EP+
Sbjct: 114 SVVLPIEAASWPLHGNVTPHFNGFLSFPYASQHTVQHPQIRGLVPSRMPLPHNIPENEPI 173
Query: 101 YVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKK 158
+VNAKQY+ ILRRR+ RAK E + K+IK RKPYLHESRH HA++R RG GGRFLNTKK
Sbjct: 174 FVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKK 231
>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana
GN=NFYA2 PE=2 SV=1
Length = 295
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 92/149 (61%), Gaps = 15/149 (10%)
Query: 53 VLTSYPYTDPQHVGVITPYVPQAMIPPQLYGMHQARMPLPLEMEEEPVYVNAKQYRGILR 112
+ T YPY + Q+ GV++ Y Q+ + +PL +E E+ +YVN+KQY GI+R
Sbjct: 101 IYTKYPYGEQQYYGVVSAYGSQSRV----------MLPLNMETEDSTIYVNSKQYHGIIR 150
Query: 113 RRQSRAKAE--LEKKVI--KARKPYLHESRHQHAMRRARGCGGRFLNTKKLN-DNAANSA 167
RRQSRAKA L++K + + RKPY+H SRH HA+RR RG GGRFLNTK N +N+ +A
Sbjct: 151 RRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNA 210
Query: 168 EKGMNSGADSSKGSTNGTGSVDSSIVQQE 196
+KG S S+ + S +S +V E
Sbjct: 211 KKGDGSMQIQSQPKPQQSNSQNSEVVHPE 239
>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana
GN=NFYA10 PE=2 SV=2
Length = 269
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 83/131 (63%), Gaps = 21/131 (16%)
Query: 52 IVLTSYPYTDPQHVGVITPYVPQAMIPPQLYGMHQARMPLPLEMEEE---PVYVNAKQYR 108
++ T +P+ + Q+ GV++ Y Q R+ +PL+ME E +YVN+KQY
Sbjct: 95 MMYTKHPHVE-QYYGVVSAYGSQ---------RSSGRVMIPLKMETEEDGTIYVNSKQYH 144
Query: 109 GILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKLNDNAANSAE 168
GI+RRRQSRAKAE K+ + RKPY+H SRH HAMRR RG GGRFLNTK A++A+
Sbjct: 145 GIIRRRQSRAKAE---KLSRCRKPYMHHSRHLHAMRRPRGSGGRFLNTK-----TADAAK 196
Query: 169 KGMNSGADSSK 179
+ S + SS+
Sbjct: 197 QSKPSNSQSSE 207
>sp|P23708|NFYA_MOUSE Nuclear transcription factor Y subunit alpha OS=Mus musculus
GN=Nfya PE=1 SV=2
Length = 346
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 88 RMPLP-LEM-EEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRR 145
R+PLP EM EEEP+YVNAKQY IL+RRQ+RAK E E K+ K R+ YLHESRH+HAM R
Sbjct: 250 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 309
Query: 146 ARGCGGRFLNTKK 158
RG GGRF + K+
Sbjct: 310 KRGEGGRFFSPKE 322
>sp|P23511|NFYA_HUMAN Nuclear transcription factor Y subunit alpha OS=Homo sapiens
GN=NFYA PE=1 SV=2
Length = 347
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 88 RMPLP-LEM-EEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRR 145
R+PLP EM EEEP+YVNAKQY IL+RRQ+RAK E E K+ K R+ YLHESRH+HAM R
Sbjct: 251 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 310
Query: 146 ARGCGGRFLNTKK 158
RG GGRF + K+
Sbjct: 311 KRGEGGRFFSPKE 323
>sp|P18576|NFYA_RAT Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus
GN=Nfya PE=1 SV=1
Length = 341
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 88 RMPLP-LEM-EEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRR 145
R+PLP EM EEEP+YVNAKQY IL+RRQ+RAK E E K+ K R+ YLHESRH+HAM R
Sbjct: 245 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 304
Query: 146 ARGCGGRFLNTKK 158
RG GGRF + K+
Sbjct: 305 KRGEGGRFFSPKE 317
>sp|Q5E9S2|NFYA_BOVIN Nuclear transcription factor Y subunit alpha OS=Bos taurus GN=NFYA
PE=2 SV=1
Length = 341
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 88 RMPLP-LEM-EEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRR 145
R+PLP EM EEEP+YVNAKQY IL+RRQ+RAK E E K+ K R+ YLHESRH+HAM R
Sbjct: 245 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 304
Query: 146 ARGCGGRFLNTKK 158
RG GGRF + K+
Sbjct: 305 KRGEGGRFFSPKE 317
>sp|Q54S29|NFYA_DICDI Nuclear transcription factor Y subunit alpha OS=Dictyostelium
discoideum GN=nfyA PE=3 SV=1
Length = 517
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 55/77 (71%), Gaps = 7/77 (9%)
Query: 78 PPQLYGMHQARMPLPLEMEEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHES 137
P LY ARM E+ EEP+YVNAKQY IL+RR +RAK E E K+ K RK Y HES
Sbjct: 216 PHMLY----ARMA---EIVEEPLYVNAKQYNRILKRRAARAKLESENKLPKTRKAYQHES 268
Query: 138 RHQHAMRRARGCGGRFL 154
RHQHA+RR RGCGGRFL
Sbjct: 269 RHQHAIRRQRGCGGRFL 285
>sp|P06774|HAP2_YEAST Transcriptional activator HAP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAP2 PE=1 SV=1
Length = 265
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 97 EEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNT 156
E+P YVNAKQY IL+RR +RAK E + ++ + RKPYLHESRH+HAMRR RG GGRFL
Sbjct: 158 EQPFYVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRRPRGEGGRFLTA 217
Query: 157 KKLNDNAANSAEKGMNSGADSSKGSTNGTGSVDSSIVQQE 196
++ A K SGA ++ + + I+Q++
Sbjct: 218 AEIK------AMKSKKSGASDDPDDSHEDKKITTKIIQEQ 251
>sp|P53768|HAP2_KLULA Transcriptional activator HAP2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=HAP2 PE=3 SV=1
Length = 300
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%)
Query: 85 HQARMPLPLEMEEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMR 144
H + P E E+P YVNAKQY IL+RR +RAK E K+ + R+PYLHESRH+HAMR
Sbjct: 172 HDMNIISPSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMR 231
Query: 145 RARGCGGRFLNTKKL 159
R RG GGRFL ++
Sbjct: 232 RPRGQGGRFLTAAEM 246
>sp|P24488|HAP2_SCHPO Transcriptional activator hap2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hap2 PE=3 SV=1
Length = 334
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Query: 98 EPV---YVNAKQYRGILRRRQSRAKAELE-KKVIKARKPYLHESRHQHAMRRARGCGGRF 153
EPV YVNAKQY IL+RR++RAK E + V +KPYLHESRH+HAMRR RG GGRF
Sbjct: 5 EPVEGLYVNAKQYHRILKRREARAKLEERLRGVQTTKKPYLHESRHKHAMRRPRGPGGRF 64
Query: 154 LNTKKL 159
L K+
Sbjct: 65 LTADKV 70
>sp|Q18F10|AROC_HALWD Chorismate synthase OS=Haloquadratum walsbyi (strain DSM 16790)
GN=aroC PE=3 SV=1
Length = 383
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 12/137 (8%)
Query: 131 KPYLHESRHQHAM--------RRARGCGGRFLNTKKLNDNAANS-AEKGMNSGADSSKGS 181
+PY+ R H R G GGR + +N AA + A+K + +K
Sbjct: 96 EPYVTAPRPSHGDFTYSAKFGTRNWGGGGRSSARETVNWVAAGAIAQKILTEYGIKAKAH 155
Query: 182 TNGTGSVDSSIVQQERAMEENAHMEHTSSNSNSNNR--SLLSMYNTSSGSVEGNFLGQQR 239
N G + + V E +E E ++ + R + Y T S+ G+ + R
Sbjct: 156 VNQIGDIKAPPVTFEEMLEHTEENEVRCAHPETAERMRERIDEYQTEGDSIGGSIYFEAR 215
Query: 240 GSMQGNGAPR-GALPVK 255
G G GAPR +LP +
Sbjct: 216 GVPAGLGAPRFDSLPAR 232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.127 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,698,956
Number of Sequences: 539616
Number of extensions: 3978241
Number of successful extensions: 20484
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 16041
Number of HSP's gapped (non-prelim): 3734
length of query: 255
length of database: 191,569,459
effective HSP length: 115
effective length of query: 140
effective length of database: 129,513,619
effective search space: 18131906660
effective search space used: 18131906660
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)