Query 025304
Match_columns 255
No_of_seqs 119 out of 140
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 07:40:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025304.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025304hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bcv_A Putative glycosyltransf 98.4 6.6E-08 2.3E-12 81.5 2.3 99 14-123 5-111 (240)
2 1qg8_A Protein (spore coat pol 98.3 9.3E-08 3.2E-12 81.5 1.3 96 15-123 2-115 (255)
3 2fy7_A Beta-1,4-galactosyltran 98.1 1E-06 3.5E-11 79.6 3.5 77 7-113 58-146 (287)
4 1xhb_A Polypeptide N-acetylgal 97.9 1.4E-06 4.9E-11 81.9 0.2 102 13-124 28-142 (472)
5 3l7i_A Teichoic acid biosynthe 97.9 1.5E-06 5.1E-11 86.8 0.0 102 15-122 3-109 (729)
6 2ffu_A Ppgalnact-2, polypeptid 97.9 2.9E-06 1E-10 80.7 1.4 98 13-124 65-174 (501)
7 3ckj_A Putative uncharacterize 97.8 6.4E-06 2.2E-10 74.4 2.9 103 13-120 47-156 (329)
8 2d7i_A Polypeptide N-acetylgal 97.7 3.6E-06 1.2E-10 82.0 -0.3 99 14-124 112-224 (570)
9 4fix_A UDP-galactofuranosyl tr 97.7 4.9E-06 1.7E-10 83.1 0.3 109 7-124 173-296 (657)
10 2z86_A Chondroitin synthase; G 97.7 1.3E-05 4.5E-10 77.8 2.8 97 14-123 375-481 (625)
11 3f1y_A Mannosyl-3-phosphoglyce 97.7 4.7E-06 1.6E-10 78.2 -0.4 104 14-122 94-206 (387)
12 2z86_A Chondroitin synthase; G 97.5 2.5E-05 8.6E-10 75.8 2.1 97 14-123 93-201 (625)
13 2nxv_A ATP synthase subunits r 97.4 7.7E-05 2.6E-09 64.7 3.2 78 15-123 17-101 (249)
14 4hg6_A Cellulose synthase subu 97.0 0.00026 9E-09 71.8 3.4 109 14-122 140-264 (802)
15 2wvl_A Mannosyl-3-phosphoglyce 96.2 0.0012 4E-08 62.3 1.1 34 14-47 53-88 (391)
16 1fo8_A Alpha-1,3-mannosyl-glyc 95.1 0.018 6.2E-07 53.3 4.5 97 15-125 3-124 (343)
17 1v84_A Galactosylgalactosylxyl 92.0 0.081 2.8E-06 47.3 2.9 32 16-47 5-42 (253)
18 2d0j_A Galactosylgalactosylxyl 91.8 0.096 3.3E-06 46.6 3.2 32 16-47 5-42 (246)
19 3cu0_A Galactosylgalactosylxyl 91.3 0.12 4E-06 46.9 3.3 32 16-47 23-60 (281)
20 2bo4_A Mannosylglycerate synth 83.5 0.55 1.9E-05 44.0 2.7 90 18-113 4-110 (397)
21 2zu9_A Mannosyl-3-phosphoglyce 80.9 0.37 1.3E-05 45.5 0.4 34 14-47 51-86 (394)
22 3lw6_A FI08434P, beta-4-galact 73.9 1.3 4.4E-05 40.2 1.9 80 3-112 40-129 (287)
No 1
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=98.42 E-value=6.6e-08 Score=81.48 Aligned_cols=99 Identities=16% Similarity=0.248 Sum_probs=67.0
Q ss_pred CCeEEEEecccCh----hHHHhhhhc-cCCeEEEEEecCCCCcccccCCCccccccChhhhhhhhCCCcccc---ccCcc
Q 025304 14 DELDIVIPTIRNL----DFLEMWRPF-FEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCI---SFKDS 85 (255)
Q Consensus 14 ~~v~IVItTi~~p----~~L~~~~~~-~~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~~~~~~l---P~~s~ 85 (255)
-.++|||||+++. +||+++.+. .+.+++|||-|....++.+....+ .++ .....++ ..+..
T Consensus 5 p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~---------~~~--~~~i~~i~~~n~G~~ 73 (240)
T 3bcv_A 5 PKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDY---------AAQ--YPNIKVIHKKNAGLG 73 (240)
T ss_dssp CSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHH---------HHH--CSSEEEEECCCCCHH
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHH---------Hhh--CCCEEEEECCCCChH
Confidence 3699999999986 688888765 789999999998322221111000 000 0001111 24567
Q ss_pred cccceeeEEEcceEEEeecCCCcccCCCCCccchhhhh
Q 025304 86 ACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQ 123 (255)
Q Consensus 86 arRN~GyL~A~a~~I~~~DDDn~p~~~~~g~~~d~~~~ 123 (255)
+++|.|.-.|.++||+++|+|..+.++++.+.+..+++
T Consensus 74 ~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 74 MACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQK 111 (240)
T ss_dssp HHHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHh
Confidence 88999999999999999999999998875555555443
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=98.34 E-value=9.3e-08 Score=81.46 Aligned_cols=96 Identities=16% Similarity=0.220 Sum_probs=66.1
Q ss_pred CeEEEEecccCh----hHHHhhhhc-cCCeEEEEEecCCCCcccccCCCccccccChhhhhhhh-CCCcccc--------
Q 025304 15 ELDIVIPTIRNL----DFLEMWRPF-FEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRIL-GPKASCI-------- 80 (255)
Q Consensus 15 ~v~IVItTi~~p----~~L~~~~~~-~~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l-~~~~~~l-------- 80 (255)
.++|||||+++. +||+++.+. .+.+++|||-|....++...- +++. .....++
T Consensus 2 ~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~-------------~~~~~~~~i~~i~~~~~~~~ 68 (255)
T 1qg8_A 2 KVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVI-------------RPFLNDNRVRFYQSDISGVK 68 (255)
T ss_dssp CEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHH-------------GGGGGSTTEEEEECCCCSHH
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHH-------------HHHhhcCCEEEEeccccccc
Confidence 489999999986 688888765 789999999998322221111 1110 0111111
Q ss_pred ----ccCcccccceeeEEEcceEEEeecCCCcccCCCCCccchhhhh
Q 025304 81 ----SFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQ 123 (255)
Q Consensus 81 ----P~~s~arRN~GyL~A~a~~I~~~DDDn~p~~~~~g~~~d~~~~ 123 (255)
..+..+++|.|+-.|.++||+++|+|..+.++++.+.+..+.+
T Consensus 69 ~~~~n~G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~ 115 (255)
T 1qg8_A 69 ERTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDT 115 (255)
T ss_dssp HHHSSCHHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHh
Confidence 1345778999998899999999999999998876665555554
No 3
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=98.13 E-value=1e-06 Score=79.57 Aligned_cols=77 Identities=13% Similarity=0.126 Sum_probs=59.4
Q ss_pred CCCCCCCCCeEEEEecccCh----hHHHhhh----hccCCeEEEEEecCCCCcccccCCCccccccChhhhhhhhCCCcc
Q 025304 7 KPTPLLKDELDIVIPTIRNL----DFLEMWR----PFFEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKAS 78 (255)
Q Consensus 7 ~~~~~~~~~v~IVItTi~~p----~~L~~~~----~~~~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~~~~~ 78 (255)
+..|...-.++|||||+++. +||+++. +....+++|||-|.++ .
T Consensus 58 p~~c~~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~~EIiVVdds~d-------~--------------------- 109 (287)
T 2fy7_A 58 PRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGD-------T--------------------- 109 (287)
T ss_dssp CSSSBCSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSS-------S---------------------
T ss_pred CCCCCcCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEeCCC-------C---------------------
Confidence 44455566799999999997 5888887 3477899999998511 0
Q ss_pred ccccCcccccceee----EEEcceEEEeecCCCcccCCC
Q 025304 79 CISFKDSACRCFGY----MVSKKKYIFTIDDDCFVAKDP 113 (255)
Q Consensus 79 ~lP~~s~arRN~Gy----L~A~a~~I~~~DDDn~p~~~~ 113 (255)
+|+....+|.|+ ..|.++||+|+|+|+.|.+++
T Consensus 110 --~f~~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 110 --IFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp --CCCHHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTT
T ss_pred --ccchhhhhhhHHHHHHHhCCCCEEEEECCCcccCCCc
Confidence 123456699999 666799999999999999985
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=97.92 E-value=1.4e-06 Score=81.87 Aligned_cols=102 Identities=12% Similarity=0.051 Sum_probs=67.8
Q ss_pred CCCeEEEEecccCh-----hHHHhhhhc-cCC--eEEEEEecCCCCc-ccccCCCccccccChhhhhhhhCCCccccc--
Q 025304 13 KDELDIVIPTIRNL-----DFLEMWRPF-FEP--YHLIIVQDGDPSK-TIKVPDGFDYELYNRNDINRILGPKASCIS-- 81 (255)
Q Consensus 13 ~~~v~IVItTi~~p-----~~L~~~~~~-~~~--~~lVVV~D~~~~~-~~ktp~~~~~~~~~~~~q~~~l~~~~~~lP-- 81 (255)
.-.++||||++++. +||+++.+. .+. +++|||-|....+ +...- .+..+++.. ...+|.
T Consensus 28 ~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l---------~~~~~~~~~-~v~vi~~~ 97 (472)
T 1xhb_A 28 LPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPL---------ESYVKKLKV-PVHVIRME 97 (472)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHH---------HHHHHSSSS-CEEEEECS
T ss_pred CCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHH---------HHHHHHCCC-cEEEEECC
Confidence 34699999999986 577777664 445 6999999982221 11110 000011110 122221
Q ss_pred --cCcccccceeeEEEcceEEEeecCCCcccCCCCCccchhhhhh
Q 025304 82 --FKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQH 124 (255)
Q Consensus 82 --~~s~arRN~GyL~A~a~~I~~~DDDn~p~~~~~g~~~d~~~~~ 124 (255)
.+-.+++|.|...|.++||+++|+|+.+.++|+.+.++.+.++
T Consensus 98 ~n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~ 142 (472)
T 1xhb_A 98 QRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHD 142 (472)
T ss_dssp SCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHC
T ss_pred CCCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhC
Confidence 3467889999999999999999999999999977777776643
No 5
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=97.90 E-value=1.5e-06 Score=86.75 Aligned_cols=102 Identities=19% Similarity=0.235 Sum_probs=0.0
Q ss_pred CeEEEEecccCh----hHHHhhhhc-cCCeEEEEEecCCCCcccccCCCccccccChhhhhhhhCCCccccccCcccccc
Q 025304 15 ELDIVIPTIRNL----DFLEMWRPF-FEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCISFKDSACRC 89 (255)
Q Consensus 15 ~v~IVItTi~~p----~~L~~~~~~-~~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~~~~~~lP~~s~arRN 89 (255)
.++|||||+++. +||+++.+. .+++++|||-|...-++......+... + ..+-+++..... .+..+++|
T Consensus 3 ~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~-~--~~~i~~i~~~~n---~G~~~arN 76 (729)
T 3l7i_A 3 KLTIIVTYYNAEEYITGCLESIKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKD-Y--DKNIRFIDLDEN---SGHAHARN 76 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCcHHHHHHHHHHh-C--CCCEEEEECCCC---CCHHHHHH
Confidence 589999999986 688887765 789999999998333332222111100 0 001111111111 35788999
Q ss_pred eeeEEEcceEEEeecCCCcccCCCCCccchhhh
Q 025304 90 FGYMVSKKKYIFTIDDDCFVAKDPSGKEINALE 122 (255)
Q Consensus 90 ~GyL~A~a~~I~~~DDDn~p~~~~~g~~~d~~~ 122 (255)
.|.-.|.++||+++|+|..+.++++.+.++.++
T Consensus 77 ~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 77 IALEEVETPYFMFLDADDELASYAITFYLEKFN 109 (729)
T ss_dssp ---------------------------------
T ss_pred HHHHhccCCEEEEECCCCCCChhHHHHHHHHhc
Confidence 999999999999999999999998887777766
No 6
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=97.87 E-value=2.9e-06 Score=80.73 Aligned_cols=98 Identities=13% Similarity=0.057 Sum_probs=66.9
Q ss_pred CCCeEEEEecccCh-----hHHHhhhhc-cCC--eEEEEEecCCCCcccccCCCccccccChhhhhhhhCCCccccc---
Q 025304 13 KDELDIVIPTIRNL-----DFLEMWRPF-FEP--YHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCIS--- 81 (255)
Q Consensus 13 ~~~v~IVItTi~~p-----~~L~~~~~~-~~~--~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~~~~~~lP--- 81 (255)
.-.++||||++++. +||+++.+. .+. +++|||-|....++.+. .+ ++. ....++.
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~-------~~-----~~~--~~v~vi~~~~ 130 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGA-------LL-----GKI--EKVRVLRNDR 130 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHH-------GG-----GGB--TTEEEEECSS
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHH-------HH-----hcC--CCEEEEECCC
Confidence 34699999999985 367776654 444 59999999832222110 00 011 1122222
Q ss_pred -cCcccccceeeEEEcceEEEeecCCCcccCCCCCccchhhhhh
Q 025304 82 -FKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQH 124 (255)
Q Consensus 82 -~~s~arRN~GyL~A~a~~I~~~DDDn~p~~~~~g~~~d~~~~~ 124 (255)
.+..+++|.|...|.++||+++|+|+.+.++|+...+..+.++
T Consensus 131 n~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~ 174 (501)
T 2ffu_A 131 REGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAED 174 (501)
T ss_dssp CCHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhC
Confidence 3467889999999999999999999999999977777766654
No 7
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=97.83 E-value=6.4e-06 Score=74.42 Aligned_cols=103 Identities=12% Similarity=0.093 Sum_probs=63.2
Q ss_pred CCCeEEEEecccCh----hHHHhhhhc-cC-CeEEEEEecCCCCcccccCCCccccccChhhhhhhhCCCccccccCccc
Q 025304 13 KDELDIVIPTIRNL----DFLEMWRPF-FE-PYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCISFKDSA 86 (255)
Q Consensus 13 ~~~v~IVItTi~~p----~~L~~~~~~-~~-~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~~~~~~lP~~s~a 86 (255)
+-.++||||++++. +||+++.+. .+ .+++|||.|...-.+.+.-..+...+. .+.+++... --..+..+
T Consensus 47 ~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~---~~~~~~~~~--~~n~G~~~ 121 (329)
T 3ckj_A 47 GRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVV---SREQALPEV--PIRPGKGE 121 (329)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEE---EHHHHCTTS--CCCCSHHH
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhc---cceeeeccC--CCCCCHHH
Confidence 34699999999986 588888765 45 499999999832222221111100000 011111000 01134567
Q ss_pred ccceeeEEEcceEEEeecCCCc-ccCCCCCccchh
Q 025304 87 CRCFGYMVSKKKYIFTIDDDCF-VAKDPSGKEINA 120 (255)
Q Consensus 87 rRN~GyL~A~a~~I~~~DDDn~-p~~~~~g~~~d~ 120 (255)
++|.|+..|.++||+++|+|.. +.++++.+.+..
T Consensus 122 a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~ 156 (329)
T 3ckj_A 122 ALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGP 156 (329)
T ss_dssp HHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHH
Confidence 8899998889999999999999 788764444443
No 8
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=97.74 E-value=3.6e-06 Score=82.05 Aligned_cols=99 Identities=12% Similarity=0.146 Sum_probs=67.8
Q ss_pred CCeEEEEecccCh-----hHHHhhhhc-cCCe--EEEEEecCCCCcccccCCCccccccChhhhhhhhC--CCcccc---
Q 025304 14 DELDIVIPTIRNL-----DFLEMWRPF-FEPY--HLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILG--PKASCI--- 80 (255)
Q Consensus 14 ~~v~IVItTi~~p-----~~L~~~~~~-~~~~--~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~--~~~~~l--- 80 (255)
-.++||||++++. +||+++.+. .+.+ ++|||-|.....+. .+..+++.. ....+|
T Consensus 112 P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl------------~~~l~~~~~~~~~v~vi~~~ 179 (570)
T 2d7i_A 112 PNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHL------------KKPLEDYMALFPSVRILRTK 179 (570)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGG------------THHHHHHHTTSTTEEEEECS
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHH------------HHHHHHHHHhCCeEEEEECC
Confidence 4699999999985 477777654 4554 99999998322220 011111111 112222
Q ss_pred -ccCcccccceeeEEEcceEEEeecCCCcccCCCCCccchhhhhh
Q 025304 81 -SFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQH 124 (255)
Q Consensus 81 -P~~s~arRN~GyL~A~a~~I~~~DDDn~p~~~~~g~~~d~~~~~ 124 (255)
..+-.+++|.|...|.++||+++|+|+.+.++|+...+..+.++
T Consensus 180 ~n~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~ 224 (570)
T 2d7i_A 180 KREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARN 224 (570)
T ss_dssp SCCCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhC
Confidence 14567889999999999999999999999999988777776653
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=97.72 E-value=4.9e-06 Score=83.12 Aligned_cols=109 Identities=15% Similarity=0.092 Sum_probs=67.8
Q ss_pred CCCCCCCCCeEEEEecccCh----hHHHhhhhc-c---CCeEEEEEecCCCCcccccCCCccccccChhhhhhhhCCCcc
Q 025304 7 KPTPLLKDELDIVIPTIRNL----DFLEMWRPF-F---EPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKAS 78 (255)
Q Consensus 7 ~~~~~~~~~v~IVItTi~~p----~~L~~~~~~-~---~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~~~~~ 78 (255)
+.+....-.++|||||++++ +||+++.+. . ..+++|||-|...-.. .++ ...+..+-.+....
T Consensus 173 ~~~~~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s-~~~--------~~~e~~~~~~~~I~ 243 (657)
T 4fix_A 173 TSPAPGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVR-DHP--------DFPAAAARLGSRLS 243 (657)
T ss_dssp SSCCCSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGG-GST--------THHHHHHHHGGGEE
T ss_pred CCCCCCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCcc-chH--------HHHHHHHhcCCCEE
Confidence 33445567899999999987 588887664 3 5569999998721100 000 00001000111112
Q ss_pred cc---ccCcccccceeeEEEc----ceEEEeecCCCcccCCCCCccchhhhhh
Q 025304 79 CI---SFKDSACRCFGYMVSK----KKYIFTIDDDCFVAKDPSGKEINALEQH 124 (255)
Q Consensus 79 ~l---P~~s~arRN~GyL~A~----a~~I~~~DDDn~p~~~~~g~~~d~~~~~ 124 (255)
+| ..+..+.+|.|...|. ++||+++|||+.+.++++...+.+++.+
T Consensus 244 vI~~~N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~ 296 (657)
T 4fix_A 244 IHDQPNLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFA 296 (657)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHB
T ss_pred EEECCCCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhC
Confidence 22 1346678899988873 5899999999999998866666665543
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=97.69 E-value=1.3e-05 Score=77.82 Aligned_cols=97 Identities=16% Similarity=0.238 Sum_probs=66.5
Q ss_pred CCeEEEEecccCh----hHHHhhhhc-cCCeEEEEEecCCCCcccccCCCccccccChhhhhhhhC--CCcccc---ccC
Q 025304 14 DELDIVIPTIRNL----DFLEMWRPF-FEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILG--PKASCI---SFK 83 (255)
Q Consensus 14 ~~v~IVItTi~~p----~~L~~~~~~-~~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~--~~~~~l---P~~ 83 (255)
-.++|||||+++. +||+++.+. .+.+++|||.|...-.+... .+++.. ....++ ..+
T Consensus 375 ~~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~-------------~~~~~~~~~~i~~~~~~n~G 441 (625)
T 2z86_A 375 PLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRI-------------LQEHYANHPRVRFISQKNKG 441 (625)
T ss_dssp CSEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHH-------------HHHHHTTCTTEEEEEECCCC
T ss_pred CeEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHH-------------HHHHHhhCCcEEEEeCCCCC
Confidence 4699999999986 688888765 88999999999822221111 111111 011111 235
Q ss_pred cccccceeeEEEcceEEEeecCCCcccCCCCCccchhhhh
Q 025304 84 DSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQ 123 (255)
Q Consensus 84 s~arRN~GyL~A~a~~I~~~DDDn~p~~~~~g~~~d~~~~ 123 (255)
..+++|.|+-.|.++||+++|+|..+.++++.+.+..+.+
T Consensus 442 ~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~ 481 (625)
T 2z86_A 442 IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRK 481 (625)
T ss_dssp HHHHHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHh
Confidence 6778899998889999999999999998876655555543
No 11
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=97.69 E-value=4.7e-06 Score=78.18 Aligned_cols=104 Identities=12% Similarity=0.111 Sum_probs=64.6
Q ss_pred CCeEEEEecccCh----hHHHhhhhc----cCCeEEEEEecCCCCcccccCCCccccccChhhhhhhhCCCccccccCcc
Q 025304 14 DELDIVIPTIRNL----DFLEMWRPF----FEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCISFKDS 85 (255)
Q Consensus 14 ~~v~IVItTi~~p----~~L~~~~~~----~~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~~~~~~lP~~s~ 85 (255)
-.++||||++++. +||+++.+. ...+++|||-|...-.+......+...+... ..+++... -..+-.
T Consensus 94 p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~--~~~~i~~~---~n~G~g 168 (387)
T 3f1y_A 94 LTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAEVYSE--NELMSGYG---DAHGKG 168 (387)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCEEEEG--GGTTGGGC---SCCSHH
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCchhccc--ceeEecCC---ccCCHH
Confidence 4699999999986 588887652 2579999999983222222211111100000 00000000 023467
Q ss_pred cccceeeEEEcceEEEeecCCCc-ccCCCCCccchhhh
Q 025304 86 ACRCFGYMVSKKKYIFTIDDDCF-VAKDPSGKEINALE 122 (255)
Q Consensus 86 arRN~GyL~A~a~~I~~~DDDn~-p~~~~~g~~~d~~~ 122 (255)
+++|.|+..|.++||+++|.|.. +.++|+.+.+..+.
T Consensus 169 ~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~ 206 (387)
T 3f1y_A 169 DAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVL 206 (387)
T ss_dssp HHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHH
Confidence 78899999999999999999999 78777655555554
No 12
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=97.53 E-value=2.5e-05 Score=75.80 Aligned_cols=97 Identities=21% Similarity=0.219 Sum_probs=65.2
Q ss_pred CCeEEEEecccCh----hHHHhhhhc-c-CCeEEEEEecCCCCcccccCCCccccccChhhhhhhhC-CCcccc--c---
Q 025304 14 DELDIVIPTIRNL----DFLEMWRPF-F-EPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILG-PKASCI--S--- 81 (255)
Q Consensus 14 ~~v~IVItTi~~p----~~L~~~~~~-~-~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~-~~~~~l--P--- 81 (255)
-.++|||||++++ +||+++.+. . ..+++|||.|....++.... +++.. .....+ +
T Consensus 93 p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~-------------~~~~~~~~i~~i~~~~~~ 159 (625)
T 2z86_A 93 DGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIV-------------REFESLLNIKYVRQKDYG 159 (625)
T ss_dssp CCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHH-------------HTTTTTSCEEEEEECCCS
T ss_pred CcEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHH-------------HHhhhcCCeEEEEeCCCC
Confidence 3699999999997 577887765 2 48999999998322221111 11110 001111 1
Q ss_pred cCcccccceeeEEEcceEEEeecCCCcccCCCCCccchhhhh
Q 025304 82 FKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQ 123 (255)
Q Consensus 82 ~~s~arRN~GyL~A~a~~I~~~DDDn~p~~~~~g~~~d~~~~ 123 (255)
.+..+++|.|+..|.++||+++|+|+.+.++|+...+..+.+
T Consensus 160 ~g~~~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~ 201 (625)
T 2z86_A 160 YQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAV 201 (625)
T ss_dssp CCHHHHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHH
T ss_pred cchhHHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhc
Confidence 224578999999999999999999999998876666655553
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=97.39 E-value=7.7e-05 Score=64.68 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=56.5
Q ss_pred CeEEEEecccCh----hHHHhhhhc--cCC-eEEEEEecCCCCcccccCCCccccccChhhhhhhhCCCccccccCcccc
Q 025304 15 ELDIVIPTIRNL----DFLEMWRPF--FEP-YHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCISFKDSAC 87 (255)
Q Consensus 15 ~v~IVItTi~~p----~~L~~~~~~--~~~-~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~~~~~~lP~~s~ar 87 (255)
.++|| |++++. +||+++.+. .+. +|+|||-+. .+. + .+.+++
T Consensus 17 ~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~------s~d--~----------------------~g~a~a 65 (249)
T 2nxv_A 17 MFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLAADNR------EGN--Q----------------------FHGFSW 65 (249)
T ss_dssp SEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECT------TSC--S----------------------CCTTTH
T ss_pred eEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECC------CCC--c----------------------ccHHHH
Confidence 47765 568876 578866542 222 899999876 111 0 124688
Q ss_pred cceeeEEEcceEEEeecCCCcccCCCCCccchhhhh
Q 025304 88 RCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQ 123 (255)
Q Consensus 88 RN~GyL~A~a~~I~~~DDDn~p~~~~~g~~~d~~~~ 123 (255)
+|.|.-.|.++||+++|.|+.+.++|+.+.+..+++
T Consensus 66 ~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 66 HKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp HHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 999999999999999999999988886666655554
No 14
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=97.05 E-value=0.00026 Score=71.85 Aligned_cols=109 Identities=13% Similarity=0.195 Sum_probs=63.4
Q ss_pred CCeEEEEecccCh-----hHHHhhhhc-cCC--eEEEEEecCCCCccccc--CCCccccccChhhhhhhh---CCCcccc
Q 025304 14 DELDIVIPTIRNL-----DFLEMWRPF-FEP--YHLIIVQDGDPSKTIKV--PDGFDYELYNRNDINRIL---GPKASCI 80 (255)
Q Consensus 14 ~~v~IVItTi~~p-----~~L~~~~~~-~~~--~~lVVV~D~~~~~~~kt--p~~~~~~~~~~~~q~~~l---~~~~~~l 80 (255)
-.++|||||++++ +||+++.+. +++ +++|||.|+....+... |+-........+..+++. +-..-..
T Consensus 140 P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~i~~ 219 (802)
T 4hg6_A 140 PTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYSTR 219 (802)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEEC
T ss_pred CcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEEEEe
Confidence 3699999999986 377787654 555 99999999832222111 100000000000001110 1100011
Q ss_pred ccC---cccccceeeEEEcceEEEeecCCCcccCCCCCccchhhh
Q 025304 81 SFK---DSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALE 122 (255)
Q Consensus 81 P~~---s~arRN~GyL~A~a~~I~~~DDDn~p~~~~~g~~~d~~~ 122 (255)
+-+ ...++|.|+-.|.+|||+++|+|+.+.++++.+.+..++
T Consensus 220 ~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~ 264 (802)
T 4hg6_A 220 ERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFV 264 (802)
T ss_dssp SSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHH
T ss_pred cCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHh
Confidence 221 344689999989999999999999999887555555543
No 15
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=96.20 E-value=0.0012 Score=62.31 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=30.3
Q ss_pred CCeEEEEecccCh-hHHHhhhhc-cCCeEEEEEecC
Q 025304 14 DELDIVIPTIRNL-DFLEMWRPF-FEPYHLIIVQDG 47 (255)
Q Consensus 14 ~~v~IVItTi~~p-~~L~~~~~~-~~~~~lVVV~D~ 47 (255)
.+++||||.++.- .+|+++.+. ..++++|+|.|+
T Consensus 53 ~klSIVVPvYNEe~~lLesVl~qi~~d~eIIlVdDG 88 (391)
T 2wvl_A 53 EQTAIVVPTRNERLKLLEGVLSGIPHEALILVASNS 88 (391)
T ss_dssp TTEEEEEEESSCCHHHHHHHHHTSCTTSEEEEEECC
T ss_pred hceEEEEeccCcHHHHHHHHHhcCCCCceEEEEECC
Confidence 4589999999976 899998886 779999999999
No 16
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=95.06 E-value=0.018 Score=53.29 Aligned_cols=97 Identities=16% Similarity=0.163 Sum_probs=54.4
Q ss_pred CeEEEEecccChh---HHHhhhhc---cCCeEEEEEecCCCCcccccCCCccccccChhhhhhhh-CCCccccccCcccc
Q 025304 15 ELDIVIPTIRNLD---FLEMWRPF---FEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRIL-GPKASCISFKDSAC 87 (255)
Q Consensus 15 ~v~IVItTi~~p~---~L~~~~~~---~~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l-~~~~~~lP~~s~ar 87 (255)
.+.|||+|+++|+ ||+++.+. .....+||..|+...++.+.-..+.. +-.+. ..-...+ ....
T Consensus 3 ~~pViI~~yNRp~l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~-------~I~~~~~~d~~~~---~~~~ 72 (343)
T 1fo8_A 3 VIPILVIACDRSTVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGS-------AVTHIRQPDLSNI---AVQP 72 (343)
T ss_dssp CCCEEEEESSCTTHHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGG-------GSEEEECSCCCCC---CCCT
T ss_pred cccEEEEECCcHHHHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCC-------ceEEEEcCCcccc---ccch
Confidence 3679999999994 78777764 23467777778743333222211100 00000 0000111 1234
Q ss_pred cceee----------EEE--------cceEEEeecCCCcccCCCCCccchhhhhhh
Q 025304 88 RCFGY----------MVS--------KKKYIFTIDDDCFVAKDPSGKEINALEQHI 125 (255)
Q Consensus 88 RN~Gy----------L~A--------~a~~I~~~DDDn~p~~~~~g~~~d~~~~~~ 125 (255)
+|.|. .+| .+++++++|||+.|.++ .+.++.+..
T Consensus 73 ~N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spd----F~~y~~~~l 124 (343)
T 1fo8_A 73 DHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPD----FFEYFQATY 124 (343)
T ss_dssp TCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTT----HHHHHHHHH
T ss_pred hhcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHH----HHHHHHHHH
Confidence 45552 122 48999999999999998 566666543
No 17
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=91.96 E-value=0.081 Score=47.26 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=27.7
Q ss_pred eEEEEecccCh---hHHHhhhh---ccCCeEEEEEecC
Q 025304 16 LDIVIPTIRNL---DFLEMWRP---FFEPYHLIIVQDG 47 (255)
Q Consensus 16 v~IVItTi~~p---~~L~~~~~---~~~~~~lVVV~D~ 47 (255)
|-||-||+.++ ..|.++++ ..++++-|||-|.
T Consensus 5 I~vVTPTy~R~~Q~a~LtRLa~TL~~Vp~L~WIVVEd~ 42 (253)
T 1v84_A 5 IHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDA 42 (253)
T ss_dssp EEEEEEECCSTTHHHHHHHHHHHHTTSSSEEEEEEESS
T ss_pred EEEEeCCCCccchhHHHHHHhhhhccCCceEEEEEeCC
Confidence 56888999999 58899988 3799999999997
No 18
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=91.80 E-value=0.096 Score=46.61 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=27.7
Q ss_pred eEEEEecccCh---hHHHhhhh---ccCCeEEEEEecC
Q 025304 16 LDIVIPTIRNL---DFLEMWRP---FFEPYHLIIVQDG 47 (255)
Q Consensus 16 v~IVItTi~~p---~~L~~~~~---~~~~~~lVVV~D~ 47 (255)
|-||-||+.++ ..|.++++ ..+.++-|||-|.
T Consensus 5 I~vVTPTy~R~~Q~a~LtRLa~TL~~Vp~l~WIVVEd~ 42 (246)
T 2d0j_A 5 IYAITPTYSRPVQKAELTRLANTFRQVAQLHWILVEDA 42 (246)
T ss_dssp EEEEEEECCSTTHHHHHHHHHHHHTTSTTEEEEEEESS
T ss_pred EEEEeCCCCccchhHHHHHHHHHHhcCCceEEEEEcCC
Confidence 56888999999 58999988 3688999999997
No 19
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=91.30 E-value=0.12 Score=46.86 Aligned_cols=32 Identities=25% Similarity=0.376 Sum_probs=27.8
Q ss_pred eEEEEecccCh---hHHHhhhh---ccCCeEEEEEecC
Q 025304 16 LDIVIPTIRNL---DFLEMWRP---FFEPYHLIIVQDG 47 (255)
Q Consensus 16 v~IVItTi~~p---~~L~~~~~---~~~~~~lVVV~D~ 47 (255)
|-||.||+.++ ..|.++++ ..++++.|||-|.
T Consensus 23 IivVTPTy~R~~Q~a~LtRLa~TL~~Vp~L~WIVVEd~ 60 (281)
T 3cu0_A 23 IYVVTPTYARLVQKAELVRLSQTLSLVPRLHWLLVEDA 60 (281)
T ss_dssp EEEEEEECCSTTHHHHHHHHHHHHTTSSSEEEEEEESS
T ss_pred EEEEeCCCCCcchhHHHHHHHHHHhcCCceEEEEEcCC
Confidence 77888899998 58999988 3789999999997
No 20
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=83.48 E-value=0.55 Score=44.00 Aligned_cols=90 Identities=12% Similarity=0.011 Sum_probs=48.1
Q ss_pred EEEecccC--hhHHHhhhh--ccCCeEEEEEecCCCCcccccCCCccccccChhhhhhhhCCCc-ccc-------ccCcc
Q 025304 18 IVIPTIRN--LDFLEMWRP--FFEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKA-SCI-------SFKDS 85 (255)
Q Consensus 18 IVItTi~~--p~~L~~~~~--~~~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~~~~-~~l-------P~~s~ 85 (255)
||||+.++ +.+++.+.. ..+.+++|||-|+..-.+...... +..+...+ .+... .+. .++..
T Consensus 4 VIiP~~eE~I~~vl~~l~~~~~~~~~EIIVVDDGStD~T~eia~~-----la~~~~~~-~g~~vi~~~~~r~~~~n~GkG 77 (397)
T 2bo4_A 4 VVFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVER-----AAPEISRA-TGTPVSVRLQERLGTLRPGKG 77 (397)
T ss_dssp EEEECCSSCHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHHH-----HHHHHHHH-HSCCEEEEECCCCSSSSSSHH
T ss_pred EEEeCCccCHHHHHHHHHHhccCCCeEEEEEECcCCccHHHHHHH-----hhhhcccc-cCCeEEEEecccCCCCCCCHH
Confidence 56666554 267777653 256899999999822222111100 00000000 11111 011 24566
Q ss_pred cccceee----EEEcceEEEeecCCCc-ccCCC
Q 025304 86 ACRCFGY----MVSKKKYIFTIDDDCF-VAKDP 113 (255)
Q Consensus 86 arRN~Gy----L~A~a~~I~~~DDDn~-p~~~~ 113 (255)
++-+.|+ ..|.+++|+++|-|.. ..+.+
T Consensus 78 ~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~ 110 (397)
T 2bo4_A 78 DGMNTALRYFLEETQWERIHFYDADITSFGPDW 110 (397)
T ss_dssp HHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHH
Confidence 6677777 5678999999999996 34443
No 21
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=80.91 E-value=0.37 Score=45.52 Aligned_cols=34 Identities=12% Similarity=0.271 Sum_probs=24.1
Q ss_pred CCeEEEEecccCh-hHHHhhhh-ccCCeEEEEEecC
Q 025304 14 DELDIVIPTIRNL-DFLEMWRP-FFEPYHLIIVQDG 47 (255)
Q Consensus 14 ~~v~IVItTi~~p-~~L~~~~~-~~~~~~lVVV~D~ 47 (255)
..++||||.+++- ..+....+ .-..+++|||.|.
T Consensus 51 ~~iSVVIP~yNEE~~lI~~vL~~i~~~~eIIvVDDg 86 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHLVDGVLKAIPHKCPIIIVSNS 86 (394)
T ss_dssp TTEEEEEEESSCCHHHHHHHHHHSCTTSCEEEEECC
T ss_pred CCEEEEEecCcccHHHHHHHHHcCCCCcEEEEEECc
Confidence 4699999999986 33444322 3347899999776
No 22
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=73.90 E-value=1.3 Score=40.20 Aligned_cols=80 Identities=15% Similarity=0.262 Sum_probs=54.9
Q ss_pred CCCCCCCCCCCCCeEEEEecccChh----HHHhhhhcc----CCeEEEEEecCCCCcccccCCCccccccChhhhhhhhC
Q 025304 3 TPSTKPTPLLKDELDIVIPTIRNLD----FLEMWRPFF----EPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILG 74 (255)
Q Consensus 3 ~~~~~~~~~~~~~v~IVItTi~~p~----~L~~~~~~~----~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~~q~~~l~ 74 (255)
|+-.|..|...-++.||||=..+.+ +|.-+.++| =.++++||--.
T Consensus 40 G~~~P~~c~~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l~y~I~VieQ~--------------------------- 92 (287)
T 3lw6_A 40 GRYTPMDGASVHKMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVLNQV--------------------------- 92 (287)
T ss_dssp -------CCCCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEC---------------------------
T ss_pred CEECCCccCCcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCCceEEEEEecC---------------------------
Confidence 3434566888889999999998874 555554432 24566666533
Q ss_pred CCccccccCcccccceeeEEEc--ceEEEeecCCCcccCC
Q 025304 75 PKASCISFKDSACRCFGYMVSK--KKYIFTIDDDCFVAKD 112 (255)
Q Consensus 75 ~~~~~lP~~s~arRN~GyL~A~--a~~I~~~DDDn~p~~~ 112 (255)
.-.||+-..--|+||+.|. .++++|-|=|-+|.++
T Consensus 93 ---~~~~FNRa~LlNvGf~ea~~~~d~~ifHDVDLlP~dd 129 (287)
T 3lw6_A 93 ---DRFRFNRASLINVGFQFASDVYDYIAMHDVDLLPLND 129 (287)
T ss_dssp ---SSSCCCHHHHHHHHHHHSCTTCCEEEEECTTEEECCT
T ss_pred ---CCCccchhheecccHHHHhccCCEEEEecccccccCC
Confidence 0235778888899999984 7999999999999987
Done!