BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025306
MGLLSNRIDKESLKPGDHIYSWRAYVYAHHGIYIGDDKVIHFTRQGQEVGTGTVIDVLLV
SSGTTRLPTPCPTCASNEVGHGVVLSCLNCFLSGGNLYRFEYGVSPALFLGKARGGTCTL
AVADPDDVVIHRAKYLLENGFGCYNVFKNNCEDFAIYCKTGLLVVDQGTMGQSGQAVSII
GGPLAAVLSTPLRLVTTNVYGMAATAVTVYCASRYAADIGMRRDVVKISAEDLTRRLATG
LLQVLEPQISATPVQ

High Scoring Gene Products

Symbol, full name Information P value
AT5G06370 protein from Arabidopsis thaliana 1.2e-106
AT3G02700 protein from Arabidopsis thaliana 7.0e-70
AT1G01225 protein from Arabidopsis thaliana 2.1e-68
AT4G00905 protein from Arabidopsis thaliana 1.7e-66
AT5G16330 protein from Arabidopsis thaliana 5.9e-57
AT5G16360 protein from Arabidopsis thaliana 3.0e-53

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025306
        (255 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2164260 - symbol:AT5G06370 "AT5G06370" species...  1055  1.2e-106  1
TAIR|locus:2076964 - symbol:AT3G02700 "AT3G02700" species...   708  7.0e-70   1
TAIR|locus:505006091 - symbol:AT1G01225 species:3702 "Ara...   694  2.1e-68   1
TAIR|locus:504955372 - symbol:AT4G00905 "AT4G00905" speci...   676  1.7e-66   1
TAIR|locus:2171347 - symbol:AT5G16330 "AT5G16330" species...   586  5.9e-57   1
TAIR|locus:2171387 - symbol:AT5G16360 "AT5G16360" species...   551  3.0e-53   1


>TAIR|locus:2164260 [details] [associations]
            symbol:AT5G06370 "AT5G06370" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0006635 "fatty acid
            beta-oxidation" evidence=RCA] [GO:0007165 "signal transduction"
            evidence=RCA] [GO:0009755 "hormone-mediated signaling pathway"
            evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR007053 Pfam:PF04970 HOGENOM:HOG000241343
            ProtClustDB:CLSN2686151 EMBL:AF380637 EMBL:AY054134 EMBL:AK226465
            IPI:IPI00538028 RefSeq:NP_568167.1 UniGene:At.7283 UniGene:At.74071
            ProteinModelPortal:Q93V51 SMR:Q93V51 IntAct:Q93V51 STRING:Q93V51
            PaxDb:Q93V51 PRIDE:Q93V51 EnsemblPlants:AT5G06370.1 GeneID:830525
            KEGG:ath:AT5G06370 TAIR:At5g06370 eggNOG:NOG324094
            InParanoid:Q93V51 OMA:LNCFLAG PhylomeDB:Q93V51
            Genevestigator:Q93V51 Uniprot:Q93V51
        Length = 259

 Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
 Identities = 195/252 (77%), Positives = 225/252 (89%)

Query:     1 MGLLSNRIDKESLKPGDHIYSWR-AYVYAHHGIYIGDDKVIHFTRQGQEVGTGTVIDVLL 59
             MGLLSNRID+ SLKPGDHIYSWR AY+YAHHGIY+GDD+VIHFTR+GQEVGTGTV+D++L
Sbjct:     1 MGLLSNRIDRSSLKPGDHIYSWRTAYIYAHHGIYVGDDRVIHFTRRGQEVGTGTVLDLIL 60

Query:    60 VSSGTTRLPTPCPTCASNEVGHGVVLSCLNCFLSGGNLYRFEYGVSPALFLGKARGGTCT 119
             VSSG +R  T CPTC     GHGVV SCLNCFL+GG LYRFEY V+ A FL KARGGTCT
Sbjct:    61 VSSGPSRNHTHCPTCVPPNEGHGVVSSCLNCFLAGGVLYRFEYSVNAAHFLVKARGGTCT 120

Query:   120 LAVADPDDVVIHRAKYLLENGFGCYNVFKNNCEDFAIYCKTGLLVVDQGTMGQSGQAVSI 179
             LAVADP+++V+HRAK+LL+NGFGCY+VFKNNCEDFAIYCKT LLV++  TMGQSGQAVSI
Sbjct:   121 LAVADPNEIVVHRAKHLLQNGFGCYDVFKNNCEDFAIYCKTALLVLEGRTMGQSGQAVSI 180

Query:   180 IGGPLAAVLSTPLRLVTTNVYGMAATAVTVYCASRYAADIGMRRDVVKISAEDLTRRLAT 239
             IGGP+AAVLSTP+RL+TTNVYGMAATA+ VYCASRYA DIGMR DV K+ AEDLTRRL++
Sbjct:   181 IGGPIAAVLSTPMRLLTTNVYGMAATAIGVYCASRYATDIGMRADVAKVEAEDLTRRLSS 240

Query:   240 GLLQVLEPQISA 251
             GL QVL+P ++A
Sbjct:   241 GLFQVLDPPLAA 252


>TAIR|locus:2076964 [details] [associations]
            symbol:AT3G02700 "AT3G02700" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:AC021640 EMBL:CP002686
            InterPro:IPR007053 Pfam:PF04970 UniGene:At.18824 UniGene:At.75116
            ProtClustDB:CLSN2686151 EMBL:BT006225 EMBL:AK117161 IPI:IPI00548769
            RefSeq:NP_566181.1 ProteinModelPortal:Q9M872 SMR:Q9M872
            EnsemblPlants:AT3G02700.1 GeneID:820843 KEGG:ath:AT3G02700
            TAIR:At3g02700 InParanoid:Q9M872 OMA:HFTRGAG PhylomeDB:Q9M872
            Genevestigator:Q9M872 Uniprot:Q9M872
        Length = 252

 Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
 Identities = 137/240 (57%), Positives = 170/240 (70%)

Query:     1 MGLLSNRIDKESLKPGDHIYSWR-AYVYAHHGIYIGDDKVIHFTR-QGQEVGTGTVIDVL 58
             MG LSN+I ++ +KPGDHIYSWR AY+YAHHGIY+G+ +V HFTR  GQE GTGT +D +
Sbjct:     1 MGFLSNKISRDDVKPGDHIYSWRQAYIYAHHGIYVGNGQVNHFTRGDGQETGTGTFLDNI 60

Query:    59 LVSSGTTRLPTPCPTCASNEVGHGVVLSCLNCFLSGGNLYRFEYGVSPALFLGKARGGTC 118
             +VSS       PCP C       GV+ SCL CFL+GG+LY FEY VSPA+FL K RGG C
Sbjct:    61 IVSSSHNHGDNPCPDCGDRSNLGGVISSCLECFLAGGDLYVFEYSVSPAIFLAKPRGGVC 120

Query:   119 TLAVADPDDVVIHRAKYLLENGFGCYNVFKNNCEDFAIYCKTGLLVVDQGTMGQSGQAVS 178
             T+A +DP + VI+RA +LL+NGFG YNVFKNNCEDFAIYCKTGLLV +   +G+SGQA S
Sbjct:   121 TIASSDPPEEVIYRANFLLQNGFGVYNVFKNNCEDFAIYCKTGLLVANTD-VGRSGQAAS 179

Query:   179 IIGGPLAAVLSTPLRLVTTNVYGMAATAVTVYCASRYAADIGMRRDVVKISAEDLTRRLA 238
             I+    + +LS+PLR V     G+A     +YC SR  +DIGMR DV K+  E L   +A
Sbjct:   180 IVAAA-SVLLSSPLRFVA-GFGGLAVAGYGMYCTSRLVSDIGMRWDVSKVPVERLVADVA 237


>TAIR|locus:505006091 [details] [associations]
            symbol:AT1G01225 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0010089 "xylem development"
            evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
            process" evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
            InterPro:IPR007053 Pfam:PF04970 EMBL:BT024776 IPI:IPI00522787
            RefSeq:NP_563621.1 UniGene:At.42658 ProteinModelPortal:Q29PY0
            SMR:Q29PY0 PaxDb:Q29PY0 PRIDE:Q29PY0 EnsemblPlants:AT1G01225.1
            GeneID:839358 KEGG:ath:AT1G01225 TAIR:At1g01225 eggNOG:NOG287992
            HOGENOM:HOG000241343 InParanoid:Q29PY0 OMA:VHRAMYL PhylomeDB:Q29PY0
            ProtClustDB:CLSN2686151 Genevestigator:Q29PY0 Uniprot:Q29PY0
        Length = 260

 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 130/238 (54%), Positives = 174/238 (73%)

Query:     1 MGLLSNRIDKESLKPGDHIYSWRA-YVYAHHGIYIGDDKVIHFTRQGQEVGTGTVIDVLL 59
             MGLL+N+I++E LKPGDHIY++RA + Y+HHGI++G  KV+HF  +   + + T     +
Sbjct:     1 MGLLTNKIEREELKPGDHIYTYRAIFAYSHHGIFVGGSKVVHFRPEHNPMDSSTSS---I 57

Query:    60 VSSGTTRLPTPCPTCASNEVGHGVVLSCLNCFLSGGNLYRFEYGVSPALFLGKARGGTCT 119
              SS +  + +  P C   +   GVVLSCL+CFL  G+LY FEYGVSP++FL K RGGTCT
Sbjct:    58 SSSSSEDICSIFPDCGFRQPDSGVVLSCLDCFLKNGSLYCFEYGVSPSVFLTKVRGGTCT 117

Query:   120 LAVADPDDVVIHRAKYLLENGFGCYNVFKNNCEDFAIYCKTGLLVVDQGTMGQSGQAVSI 179
              A +D  D VIHRA YLL+NGFG Y++FKNNCEDFA+YCKTGLL++D+  +G+SGQA SI
Sbjct:   118 TAQSDTTDSVIHRAMYLLQNGFGNYDIFKNNCEDFALYCKTGLLIMDKLGVGRSGQASSI 177

Query:   180 IGGPLAAVLSTPLRLVTTNVYGMAATAVTVYCASRYAADIGMRRDVVKISAEDLTRRL 237
             +G PLAA+LS+P +L+  +  G+A     +YC SRYA DIG+R DV+K+S EDL   L
Sbjct:   178 VGAPLAALLSSPFKLLIPSPIGVATVTAGMYCMSRYATDIGVRSDVIKVSVEDLALNL 235


>TAIR|locus:504955372 [details] [associations]
            symbol:AT4G00905 "AT4G00905" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161472
            InterPro:IPR007053 Pfam:PF04970 HOGENOM:HOG000241343
            ProtClustDB:CLSN2686151 IPI:IPI00524982 RefSeq:NP_680550.1
            UniGene:At.45468 ProteinModelPortal:Q3EAE0 SMR:Q3EAE0
            EnsemblPlants:AT4G00905.1 GeneID:827986 KEGG:ath:AT4G00905
            TAIR:At4g00905 eggNOG:NOG259933 InParanoid:Q3EAE0 OMA:DSSEAPC
            PhylomeDB:Q3EAE0 Genevestigator:Q3EAE0 Uniprot:Q3EAE0
        Length = 263

 Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 128/245 (52%), Positives = 171/245 (69%)

Query:     1 MGLLSNRIDKESLKPGDHIYSWRA-YVYAHHGIYIGDDKVIHFTRQGQEVGTGTVIDVLL 59
             MG+L+N+++++ LKPGDHIY++RA + Y+HHG+++G  KV+HF  +   +          
Sbjct:     1 MGVLTNKVERDELKPGDHIYTYRAVFAYSHHGVFVGGCKVVHFKPEHSLISPTLASSSSS 60

Query:    60 VSSGTTRL----PTPCPT---CASNEVGHGVVLSCLNCFLSGGNLYRFEYGVSPALFLGK 112
              SS  + +      PCPT   C       GVVLSCL+CFL  G+LYRF+YGVS ++FL +
Sbjct:    61 SSSSVSEVNDSSEAPCPTYPDCGYKRPKSGVVLSCLDCFLKKGSLYRFDYGVSSSIFLTR 120

Query:   113 ARGGTCTLAVADPDDVVIHRAKYLLENGFGCYNVFKNNCEDFAIYCKTGLLVVDQGTMGQ 172
              RGGTCT A +DP   VIHRA +LL+NGFG YNVF+NNCEDFA+YCKTGLL++D+  +G+
Sbjct:   121 FRGGTCTTAPSDPLQTVIHRAMHLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKNGVGR 180

Query:   173 SGQAVSIIGGPLAAVLSTPLRLVTTNVYGMAATAVTVYCASRYAADIGMRRDVVKISAED 232
             SGQA SIIG PLAA+LS+PL L+  N  G+A     +YC SRYA DIG+R DV+K+  ED
Sbjct:   181 SGQASSIIGAPLAALLSSPLTLLIPNPVGVATVTAGMYCMSRYATDIGVRNDVIKVPVED 240

Query:   233 LTRRL 237
             L   L
Sbjct:   241 LALNL 245


>TAIR|locus:2171347 [details] [associations]
            symbol:AT5G16330 "AT5G16330" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB005242
            InterPro:IPR007053 Pfam:PF04970 HOGENOM:HOG000241343
            ProtClustDB:CLSN2686151 IPI:IPI00538367 RefSeq:NP_197137.1
            UniGene:At.54864 ProteinModelPortal:Q9FFF0 SMR:Q9FFF0
            EnsemblPlants:AT5G16330.1 GeneID:831494 KEGG:ath:AT5G16330
            TAIR:At5g16330 eggNOG:NOG272845 InParanoid:Q9FFF0 OMA:LENNCED
            PhylomeDB:Q9FFF0 Genevestigator:Q9FFF0 Uniprot:Q9FFF0
        Length = 242

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 127/245 (51%), Positives = 159/245 (64%)

Query:     1 MGLLSNRIDKESLKPGDHIYSWR-AYVYAHHGIYIGDDKVIHFT-RQGQEVGTGTVIDVL 58
             +G +SN+I ++ LKPGDHIYSWR AY+Y+HHGIYIGD+KVIHFT   G E GTGT +D +
Sbjct:     9 IGFISNQISRDKLKPGDHIYSWRNAYIYSHHGIYIGDEKVIHFTCGGGLETGTGTFLDKI 68

Query:    59 LVSS-GTTRLPTPCPTCASNEVGHGVVLSCLNCFLSGGNLYRFEYGVSPALFLGKARGGT 117
             +VS     +   PC  C       GV+ SCL+CFL+GGN+Y FEY VSPA F+ K R GT
Sbjct:    69 VVSVIPNHKGDNPCSNCEEQLNLEGVISSCLDCFLAGGNIYLFEYSVSPAAFIAKPRRGT 128

Query:   118 CTLAVADPDDVVIHRAKYLL-ENGFGCYNVFKNNCEDFAIYCKTGLLVVDQGTMGQSGQA 176
             CT+A +DP D VI RAKYLL  NGFG Y+  +NNCEDFAIYCKT LLV     +G+ GQA
Sbjct:   129 CTIAPSDPCDEVISRAKYLLLRNGFGDYHALENNCEDFAIYCKTSLLVGKDYVLGRGGQA 188

Query:   177 VSIIGGPLAAVLSTPLRLVTTNVYGMAATAVTVYCASRYAADIGMRRDVVKISAEDLT-R 235
              S+      A LS P        +G  + A+ ++      ADIGMR+D +K+  E L  R
Sbjct:   189 SSVSAAAWLAQLS-P--------FG--SKAIQLF------ADIGMRKDAIKVPVESLVPR 231

Query:   236 RLATG 240
               ATG
Sbjct:   232 AYATG 236


>TAIR|locus:2171387 [details] [associations]
            symbol:AT5G16360 "AT5G16360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB005242
            InterPro:IPR007053 Pfam:PF04970 HOGENOM:HOG000241343
            ProtClustDB:CLSN2686151 EMBL:BT002837 EMBL:BT004369 IPI:IPI00535688
            RefSeq:NP_197140.1 UniGene:At.31683 UniGene:At.67082
            ProteinModelPortal:Q9FFE7 SMR:Q9FFE7 PaxDb:Q9FFE7 PRIDE:Q9FFE7
            EnsemblPlants:AT5G16360.1 GeneID:831497 KEGG:ath:AT5G16360
            TAIR:At5g16360 eggNOG:NOG291165 InParanoid:Q9FFE7 OMA:ISSTVKY
            PhylomeDB:Q9FFE7 Genevestigator:Q9FFE7 Uniprot:Q9FFE7
        Length = 283

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 113/196 (57%), Positives = 139/196 (70%)

Query:     1 MGLLSNRIDKESLKPGDHIYSWR-AYVYAHHGIYIGDDKVIHFTRQGQ-EVGTGTVIDVL 58
             MGL S++I ++ LKPGDHIYSWR AY+Y+HHG+Y+GD+KVIHFTR G  E GTGTV+D +
Sbjct:     1 MGLFSHKISRDDLKPGDHIYSWRNAYIYSHHGVYVGDEKVIHFTRGGGLEFGTGTVLDKI 60

Query:    59 LVSS--GTTRLPTPCPTCASNEVGHGVVLSCLNCFLSGGNLYRFEYGVSPALFLGKARGG 116
             +  S     R    C  C       GV+ SCL+CFL+GGNL+ FEY  SP++FL K RGG
Sbjct:    61 IDISIPNHGRRDKKCIDCGDQSNLGGVISSCLDCFLAGGNLHLFEYSASPSIFLAK-RGG 119

Query:   117 TCTLAVADPDDVVIHRAKYLL-ENGFGCYNVFKNNCEDFAIYCKTGLLVVDQGT-MGQSG 174
             TCT+A +DP D VI RAK+LL +NGFG Y++  NNCEDFAIYCKTGL V+   T  G SG
Sbjct:   120 TCTIASSDPCDEVISRAKFLLLQNGFGEYDLLDNNCEDFAIYCKTGLFVLSVATKFGCSG 179

Query:   175 QA--VSIIGGPLAAVL 188
             QA  VS  GG +A  L
Sbjct:   180 QANSVSAAGGVVALTL 195


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.138   0.421    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      255       255   0.00085  114 3  11 22  0.43    33
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  187 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.03u 0.10s 21.13t   Elapsed:  00:00:01
  Total cpu time:  21.03u 0.10s 21.13t   Elapsed:  00:00:01
  Start:  Fri May 10 03:10:33 2013   End:  Fri May 10 03:10:34 2013

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