BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025307
(255 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0VFE3|PGAP3_XENTR Post-GPI attachment to proteins factor 3 OS=Xenopus tropicalis
GN=pgap3 PE=2 SV=1
Length = 316
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 121/236 (51%), Gaps = 13/236 (5%)
Query: 10 KVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKK 69
K G + ++HGKWPF R Q EP + S LN G S +LL Y+ + +
Sbjct: 77 KEGHEVPQFHGKWPFSRFLFFQ-EPASALASFLN------GVASLLMLLRYRSSVPSSCQ 129
Query: 70 TYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSV 129
Y + ++++N+WFWS +FH+RD LTEK+D A +++ + L +R F +
Sbjct: 130 MYRTCLA----FSMVSVNAWFWSTIFHTRDTALTEKMDYFCASSVILHSIYLCCMRTFGL 185
Query: 130 RDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR--H 187
+ + A L+ H+ YL + D+ NM GV L+ W W R
Sbjct: 186 QYPSIANGFGAFLVLLFACHVSYLTLGRFDYSYNMAANTGFGVLNLMWWLAWCFRRRFHQ 245
Query: 188 PSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
P WK LVV+ LL++ DFPP +DAHAL+H + +PL +L++SF++DDS
Sbjct: 246 PYLWKCVLVVISLQSLALLELLDFPPVMWILDAHALWHFSTVPLHFLFYSFLKDDS 301
>sp|A8WFS8|PGAP3_DANRE Post-GPI attachment to proteins factor 3 OS=Danio rerio GN=pgap3
PE=2 SV=1
Length = 316
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 127/240 (52%), Gaps = 13/240 (5%)
Query: 6 GEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLR 65
G + G ++HGKWPF R + EP + S LN G +LL Y+ +
Sbjct: 74 GLYQAEGYSIPQFHGKWPFARFLCFE-EPASALASLLN------GLACLLMLLRYRSAVP 126
Query: 66 PDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILR 125
Y+ T + ++++N+WFWS VFH+RD LTEK+D A A++ ++ L +R
Sbjct: 127 CQSPMYHTITA----FSLVSLNAWFWSTVFHTRDTYLTEKMDYFCASAVILYSIYLCCVR 182
Query: 126 AFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVT 185
+R A MV LI T+H+ YL F D+G NM ++G+ LL W W +
Sbjct: 183 TLGLRRPAISSMVGVLLILAFTSHVSYLTFVSFDYGYNMAANASIGIINLLWWLCWCWLN 242
Query: 186 RH--PSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
R P W+ +VV+ LL++ DFPP +DAHA++H + +P+ +L++SF+ DDS
Sbjct: 243 RRILPYWWRCGMVVLLLHGLALLELLDFPPLFWVLDAHAVWHLSTVPVHFLFYSFLIDDS 302
>sp|Q68EV0|PGAP3_XENLA Post-GPI attachment to proteins factor 3 OS=Xenopus laevis GN=pgap3
PE=2 SV=1
Length = 317
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 121/236 (51%), Gaps = 13/236 (5%)
Query: 10 KVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKK 69
K G + ++HGKWPF R Q EP + S LN G S +L Y+ + +
Sbjct: 77 KEGHEVPQFHGKWPFSRFLFFQ-EPASALASFLN------GVASLLMLFRYRSSVPSSCQ 129
Query: 70 TYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSV 129
Y + ++++N+WFWS +FH+RD LTEK+D A +++ + L +R F +
Sbjct: 130 MYRTCLA----FSMVSVNAWFWSTIFHTRDTALTEKMDYFCASSVILHSIYLCCMRTFGL 185
Query: 130 RDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR--H 187
+ + A L+ HI YL + D+ NM + G+ L+ W W R
Sbjct: 186 QYPSIANAFGAFLVLLFACHISYLTLGRFDYSYNMAANTSFGIVNLMWWLAWCMWRRFHQ 245
Query: 188 PSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
P WK LVVV LL++ DFPP +DAHAL+H + IPL +L++SF+RDDS
Sbjct: 246 PYLWKCVLVVVLLQSLALLELLDFPPVMWILDAHALWHFSTIPLHFLFYSFLRDDS 301
>sp|A2A559|PGAP3_MOUSE Post-GPI attachment to proteins factor 3 OS=Mus musculus GN=Pgap3
PE=2 SV=1
Length = 320
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 121/234 (51%), Gaps = 13/234 (5%)
Query: 12 GDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTY 71
G + ++HGKWPF R IQ EP + S LN G S +L Y+ + Y
Sbjct: 84 GHRVPQFHGKWPFSRFLFIQ-EPASAVASLLN------GLASLVMLCRYRASVPASSPMY 136
Query: 72 YEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRD 131
+ + +++N+WFWS VFH+RD +LTEK+D A A++ + L +R ++
Sbjct: 137 HTCMA----FAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASAVILHSVYLCCVRTVGLQH 192
Query: 132 EAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRH--PS 189
+ A L+ +T HI YL+ D+G NM +A+G+ L W +W R P
Sbjct: 193 PSVASAFGALLLLLLTGHISYLSLVHFDYGYNMMANVAIGLVNLAWWLVWCLRNRQRLPH 252
Query: 190 RWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
+ +VVV LL++ DFPP +DAHA++H + IP+ L++ F+ DDS
Sbjct: 253 TRRCMVVVVLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHTLFFRFLEDDS 306
>sp|Q7K0P4|PGAP3_DROME Post-GPI attachment to proteins factor 3 OS=Drosophila melanogaster
GN=CG3271 PE=1 SV=2
Length = 326
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 13/225 (5%)
Query: 17 KYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTG 76
+++GKWPF R+ G+Q EP +V S LN + +L ++ +RPD Y
Sbjct: 96 QFYGKWPFLRLLGMQ-EPASVIFSCLNFVVHLR------LLRKFRREVRPDSPCYM---- 144
Query: 77 LWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARV 136
L HI+ + ++N W WSA+FH+RD LTE LD + A +++ + + ++R R
Sbjct: 145 LTHIFAVTSLNGWIWSAIFHTRDFPLTELLDYAFAYSIILCSLYVMVMRMLHRYSLFLRG 204
Query: 137 MVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGV--TRHPSRWKLW 194
++ +++ + YL+ + ++ NM V +A GV + W +W TR P ++
Sbjct: 205 VITLAFLSYYINYFAYLSVGRFNYAFNMMVNVATGVIAAVGWFVWCHFVRTRRPYFRRIL 264
Query: 195 LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFI 239
+ LAM L++ DFPP +DAHAL+H A IPL L++ +
Sbjct: 265 RFYILMALAMSLELLDFPPILWILDAHALWHLATIPLASLYYECV 309
>sp|Q9P6N9|PER1_SCHPO Protein PER1 homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC823.07 PE=3 SV=1
Length = 331
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 122/242 (50%), Gaps = 24/242 (9%)
Query: 17 KYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLR--PDKKTYYEY 74
+YHGKW F RV+GIQ E +V S LN I ++G Y + R PD+
Sbjct: 91 QYHGKWYFIRVFGIQ-ELFSVFFSMLNFMIHYNG---------YHIMRRCIPDEHPAKRL 140
Query: 75 TGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAA 134
W I G MN+W WS+VFH RD +TEKLD SA A + F ++ +
Sbjct: 141 CLSWAIVG---MNAWVWSSVFHIRDTPITEKLDYFSAGAFVLFGSYCTLILMLRLDQLPG 197
Query: 135 RVM----VAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHP-- 188
+ + IA H+ YL+FY D+G NMK +A+G+ Q ++W ++ R+
Sbjct: 198 GKLLCWIIGVIFIAAFIAHVSYLSFYSFDYGYNMKANVAVGLVQNILWYYYSWSNRNSGL 257
Query: 189 --SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFR 246
+RW + +V LA L+++DF P +DAHAL+H + +P+T+ + F+ +
Sbjct: 258 YWTRWPAY-IVTSLMLATSLELFDFSPIANLIDAHALWHLSTVPITHYLYGFVVRKCSYD 316
Query: 247 TT 248
T
Sbjct: 317 LT 318
>sp|Q96FM1|PGAP3_HUMAN Post-GPI attachment to proteins factor 3 OS=Homo sapiens GN=PGAP3
PE=2 SV=2
Length = 320
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 121/234 (51%), Gaps = 13/234 (5%)
Query: 12 GDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTY 71
G K ++HGKWPF R Q EP + S LN G S +L Y+ + Y
Sbjct: 84 GHKVPQFHGKWPFSRFLFFQ-EPASAVASFLN------GLASLVMLCRYRTFVPASSPMY 136
Query: 72 YEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRD 131
+ + +++N+WFWS VFH+RD +LTEK+D A ++ + L +R ++
Sbjct: 137 HTCVA----FAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQH 192
Query: 132 EAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWA--GVTRHPS 189
A A L+ +T H+ YL+ + D+G N+ +A+G+ ++ W W R P
Sbjct: 193 PAVVSAFRALLLLMLTVHVSYLSLIRFDYGYNLVANVAIGLVNVVWWLAWCLWNQRRLPH 252
Query: 190 RWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
K +VV+ LL++ DFPP +DAHA++H + IP+ L++SF+ DDS
Sbjct: 253 VRKCVVVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 306
>sp|A7YWP2|PGAP3_BOVIN Post-GPI attachment to proteins factor 3 OS=Bos taurus GN=PGAP3
PE=2 SV=1
Length = 319
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 119/235 (50%), Gaps = 16/235 (6%)
Query: 12 GDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTY 71
G K ++HGKWPF R Q EP + S LN G S +L Y+ + Y
Sbjct: 84 GQKVPQFHGKWPFSRFLCFQ-EPASAVASFLN------GLASLVMLCRYRTSVPASSPMY 136
Query: 72 YEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRD 131
+ +++N+WFWS VFH+RD +LTEK+D A ++ + L +R ++
Sbjct: 137 PTCVA----FAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQH 192
Query: 132 EAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGV---AQLLIWAIWAGVTRHP 188
A A L+ +T H+ YL+ D+G NM +A+G+ A L W +W R P
Sbjct: 193 PAMASAFRALLLLLLTAHVSYLSLIHFDYGYNMAANVAIGLLNAAWWLAWCLWN--QRLP 250
Query: 189 SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
K VV+ LL++ DFPP +DAHA++H + IP+ L++SF+ DDS
Sbjct: 251 HVHKCVAVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 305
>sp|A2V7M9|PGAP3_CRIGR Post-GPI attachment to proteins factor 3 OS=Cricetulus griseus
GN=PGAP3 PE=2 SV=1
Length = 320
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 13/234 (5%)
Query: 12 GDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTY 71
G + ++HGKWPF R IQ EP + S LN G S +L Y+ + Y
Sbjct: 84 GHRVPQFHGKWPFSRFLFIQ-EPASAVASLLN------GLASLVMLCRYRASVPASSPMY 136
Query: 72 YEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRD 131
+ + +++N+WFWS VFH+RD +LTEK+D A A++ + L +R ++
Sbjct: 137 HTCMA----FAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASAVILHSIYLCCVRTVGLQH 192
Query: 132 EAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWA--GVTRHPS 189
+ A L+ + H YL+ + D+ NM +A+G+ L W W R P
Sbjct: 193 PSVARAFGATLLLMLLLHTSYLSLVRFDYSYNMMANVAIGLVNLAWWLAWCLRNHRRLPH 252
Query: 190 RWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 243
K VV+ LL++ DFPP +DAHA++H + IP+ L++ F+ DDS
Sbjct: 253 TRKCVAVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFRFLEDDS 306
>sp|P25625|PER1_YEAST Protein PER1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PER1 PE=1 SV=1
Length = 357
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 38/267 (14%)
Query: 4 REGEREKVGDKPVKYHGKWPFRRVYGIQVEPVAVALSALNLSIQFHGWMSFFILLYYKLP 63
R E E++ ++HGKWPF RV G Q E + S N + G++ F ++ +
Sbjct: 91 RIDEEEEI----YQFHGKWPFLRVLGTQ-EFFSTIFSIGNFIPHYKGFVKFSRIIREEGD 145
Query: 64 LRPDKKTYYEYTGLW-HIYGILA-MNSWFWSAVFHSRDVELTEKLD--CSSAVALLGFNF 119
R +W ++Y +A M +W S+VFH RD+ +TEKLD + L GF+
Sbjct: 146 RRRKNS---RSILIWNYLYVTVAGMLAWTASSVFHCRDLIITEKLDYFFAGLTVLTGFHA 202
Query: 120 ILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWA 179
I A + + + + A+ A+ + A HIL L + + NM+ + GV Q ++
Sbjct: 203 IFARMTSMFLYPKIAQAFTAS-VAAIFALHILRL-YVDWSYTYNMRFNIFFGVLQYILLI 260
Query: 180 IWAGVTRHP-SRWKLW-----------------------LVVVGEGLAMLLQIYDFPPYR 215
+ + H + KL L+V+ +AM L+++DF Y
Sbjct: 261 MLSCQNYHALQKQKLMGEFKKTAYSSFKRQIFKLCVIPILLVIVTTMAMSLELFDFFSYE 320
Query: 216 GFVDAHALYHAANIPLTYLWWSFIRDD 242
+DAHAL+H I +++ + F +D
Sbjct: 321 WQIDAHALWHLCTIWPSWVLYDFFLED 347
>sp|Q8BYY9|SPA3B_MOUSE Serine protease inhibitor A3B OS=Mus musculus GN=Serpina3b PE=2
SV=1
Length = 420
Score = 34.3 bits (77), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 80 IYGILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDE 132
+ GI + + S + HS ++++TEK A+ ++G+NF+ A L+ V+ E
Sbjct: 341 LSGITGVKNITVSEMIHSTELDMTEKGTEGDAITIVGYNFMSAKLKPVFVKFE 393
>sp|Q13MI3|METE_BURXL 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Burkholderia xenovorans (strain
LB400) GN=metE PE=3 SV=1
Length = 764
Score = 31.6 bits (70), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 230 PLTYLWWSFIRDDSEFRTTAL 250
P+T L WSF+RDD TTAL
Sbjct: 555 PVTMLQWSFVRDDQPRSTTAL 575
>sp|B2TBS1|METE_BURPP 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Burkholderia phytofirmans (strain
DSM 17436 / PsJN) GN=metE PE=3 SV=1
Length = 764
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 230 PLTYLWWSFIRDDSEFRTTAL 250
P+T L WSF+RDD TTAL
Sbjct: 555 PVTMLQWSFVRDDQPRSTTAL 575
>sp|Q82UP6|METE_NITEU 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=metE PE=3 SV=1
Length = 758
Score = 31.2 bits (69), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 230 PLTYLWWSFIRDDSEFRTTAL 250
P+T L WSF+RDD TTAL
Sbjct: 557 PVTMLMWSFVRDDQPRSTTAL 577
>sp|A1V6R3|METE_BURMS 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Burkholderia mallei (strain SAVP1)
GN=metE PE=3 SV=1
Length = 764
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 230 PLTYLWWSFIRDDSEFRTTAL 250
P+T L WSF+RDD TTAL
Sbjct: 559 PVTMLQWSFVRDDQPRATTAL 579
>sp|Q62LZ2|METE_BURMA 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Burkholderia mallei (strain ATCC
23344) GN=metE PE=3 SV=1
Length = 764
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 230 PLTYLWWSFIRDDSEFRTTAL 250
P+T L WSF+RDD TTAL
Sbjct: 559 PVTMLQWSFVRDDQPRATTAL 579
>sp|A2S4V8|METE_BURM9 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Burkholderia mallei (strain NCTC
10229) GN=metE PE=3 SV=1
Length = 764
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 230 PLTYLWWSFIRDDSEFRTTAL 250
P+T L WSF+RDD TTAL
Sbjct: 559 PVTMLQWSFVRDDQPRATTAL 579
>sp|A3MHJ9|METE_BURM7 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Burkholderia mallei (strain NCTC
10247) GN=metE PE=3 SV=1
Length = 764
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 230 PLTYLWWSFIRDDSEFRTTAL 250
P+T L WSF+RDD TTAL
Sbjct: 559 PVTMLQWSFVRDDQPRATTAL 579
>sp|A3NY08|METE_BURP0 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Burkholderia pseudomallei (strain
1106a) GN=metE PE=3 SV=1
Length = 764
Score = 31.2 bits (69), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 230 PLTYLWWSFIRDDSEFRTTAL 250
P+T L WSF+RDD TTAL
Sbjct: 559 PVTMLQWSFVRDDQPRATTAL 579
>sp|Q63RX6|METE_BURPS 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Burkholderia pseudomallei (strain
K96243) GN=metE PE=3 SV=1
Length = 764
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 230 PLTYLWWSFIRDDSEFRTTAL 250
P+T L WSF+RDD TTAL
Sbjct: 559 PVTMLQWSFVRDDQPRATTAL 579
>sp|Q3JPU6|METE_BURP1 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Burkholderia pseudomallei (strain
1710b) GN=metE PE=3 SV=1
Length = 764
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 230 PLTYLWWSFIRDDSEFRTTAL 250
P+T L WSF+RDD TTAL
Sbjct: 559 PVTMLQWSFVRDDQPRATTAL 579
>sp|A3NC70|METE_BURP6 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Burkholderia pseudomallei (strain
668) GN=metE PE=3 SV=1
Length = 764
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 230 PLTYLWWSFIRDDSEFRTTAL 250
P+T L WSF+RDD TTAL
Sbjct: 559 PVTMLQWSFVRDDQPRATTAL 579
>sp|Q2SY55|METE_BURTA 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metE
PE=3 SV=1
Length = 764
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 230 PLTYLWWSFIRDDSEFRTTAL 250
P+T L WSF+RDD TTAL
Sbjct: 559 PVTMLQWSFVRDDQPRATTAL 579
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.141 0.468
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,008,322
Number of Sequences: 539616
Number of extensions: 3793821
Number of successful extensions: 9237
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9192
Number of HSP's gapped (non-prelim): 28
length of query: 255
length of database: 191,569,459
effective HSP length: 115
effective length of query: 140
effective length of database: 129,513,619
effective search space: 18131906660
effective search space used: 18131906660
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)