BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025314
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WWQ1|ATG3_ARATH Autophagy-related protein 3 OS=Arabidopsis thaliana GN=ATG3 PE=1
SV=2
Length = 313
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/254 (75%), Positives = 222/254 (87%), Gaps = 6/254 (2%)
Query: 1 MELQQKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPS 60
M L QK + FKGTVE+IT RT+SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESG+ S
Sbjct: 1 MVLSQKLHEAFKGTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDAS 60
Query: 61 KRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCD 120
KRK YLP+DKQFLITRNVPCLRRAASV E+YE AGGE+LVD+EDNDGWLATHGKPK K
Sbjct: 61 KRKPYLPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKDKG- 119
Query: 121 EDEDDNLPSMEAVEISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATL 180
E+DNLPSM+A++I++ N +++I TYFGG EE++DIPDM E++E D+++EN DPATL
Sbjct: 120 -KEEDNLPSMDALDINEKNTIQSIPTYFGG--EEDDDIPDMEEFDEADNVVEN--DPATL 174
Query: 181 PSTYLVAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQD 240
STYLVAHEPDDDNILRTRTYD+SITYDKYYQTPRVWLTGYDESRMLL+ EL++EDVSQD
Sbjct: 175 QSTYLVAHEPDDDNILRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQD 234
Query: 241 HARKTVRGVLYVHL 254
HARKTV + HL
Sbjct: 235 HARKTVTIEDHPHL 248
>sp|Q550A8|ATG3_DICDI Autophagy-related protein 3 OS=Dictyostelium discoideum GN=atg3
PE=3 SV=3
Length = 338
Score = 181 bits (459), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 153/278 (55%), Gaps = 30/278 (10%)
Query: 3 LQQKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKR 62
QQ + + TVEK+T + S F E+GVL+ EFV AGD L KC TW+WESG+PS+
Sbjct: 5 FQQAVHKAYVKTVEKVTPTLSTSKFLEEGVLTPEEFVQAGDLLTDKCQTWTWESGDPSRN 64
Query: 63 KSYLPADKQFLITRNVPCLRRAASVEEEYEGAGG-EILVDNEDNDGWLATHGKPKAKCDE 121
SYLP +KQFL+TRNVPC R ++E E + + EI ++++ D W+A +P D+
Sbjct: 65 VSYLPKEKQFLLTRNVPCYNRVRTLENESKASKADEIQIEDDGEDSWVA--PQPVGNQDD 122
Query: 122 DEDDNLPSMEAVEISKNNNVRAISTYFGGEEEEEEDIPDMAEYN----------EPDSII 171
ED+ + + +++I +T + D E + D+II
Sbjct: 123 IEDEKV-DISSLKIDDKKPNTTTTTTAKPTNNNNNNNDDEDEDEDGDIPDLDDFQDDNII 181
Query: 172 ENETDPATLPSTYLVAHEP---------------DDDNILRTRTYDISITYDKYYQTPRV 216
E E DPA L D+DNILRTRTYDISITYDKYYQTPRV
Sbjct: 182 EEE-DPAVLSKNNKTTTTTTANNNNNNNSENKVEDNDNILRTRTYDISITYDKYYQTPRV 240
Query: 217 WLTGYDESRMLLKTELILEDVSQDHARKTVRGVLYVHL 254
WL GYDE+R LK E I ED+S+DHA KTV + HL
Sbjct: 241 WLFGYDENRKPLKPEEIFEDISEDHAHKTVTIDSHPHL 278
>sp|Q6PFS7|ATG3_DANRE Ubiquitin-like-conjugating enzyme ATG3 OS=Danio rerio GN=atg3 PE=2
SV=1
Length = 317
Score = 164 bits (415), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/255 (43%), Positives = 141/255 (55%), Gaps = 33/255 (12%)
Query: 9 GIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPA 68
G G E +T S FKE GV++ EFV AGD+LV CPTW W SGE +K K YLP
Sbjct: 10 GTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEEAKVKPYLPN 69
Query: 69 DKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLAT-HGKPKAKCDE----- 121
DKQFL+TRNVPC +R +E E E +++ +D D GW+ T H E
Sbjct: 70 DKQFLLTRNVPCYKRCKQMEYSDE---LEAIIEEDDGDGGWVDTFHNSGVTGVTEAVREI 126
Query: 122 --DEDDNLPSMEAVEISKNNNVR--AISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDP 177
D DN+ N NV+ A +++EE + DM EY E + ETD
Sbjct: 127 SLDNKDNM----------NMNVKTGACGNSGDDDDDEEGEAADMEEYEESGLL---ETDD 173
Query: 178 ATLPSTYLV------AHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTE 231
ATL ++ + A +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L +
Sbjct: 174 ATLDTSKMADLSKTKAEAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVD 233
Query: 232 LILEDVSQDHARKTV 246
+ ED+SQDH +KTV
Sbjct: 234 QMYEDISQDHVKKTV 248
>sp|Q5I0S6|ATG3_XENTR Ubiquitin-like-conjugating enzyme ATG3 OS=Xenopus tropicalis
GN=atg3 PE=2 SV=1
Length = 312
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 132/232 (56%), Gaps = 8/232 (3%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRA 84
S FKE GV++ EF+ AGD+LV CPTW W +GE SK K YLP DKQFL+T+NVPC +R
Sbjct: 26 SKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEESKIKPYLPNDKQFLMTKNVPCYKRC 85
Query: 85 ASVEEEYEGAGGEILVDNEDNDGWLAT-HGKPKAKCDEDEDDNLPSMEAVEISKNNNVRA 143
+ EY I+ +++ + GW+ T H + ++ L + + + + N V
Sbjct: 86 KQM--EYSDEQEAIIEEDDGDGGWVDTFHHSLTGVTEAVKEITLETQDCGKTTSNIAVDD 143
Query: 144 ISTYFGGEEEEEEDIPDMAEYNEPDSIIE-NETDPATLPSTYLVAHEPDDDNILRTRTYD 202
GE + ED + + D+ ++ ++ A P L +D IL+TRTYD
Sbjct: 144 DDDDDEGEAADMEDYEESGLLDNDDATVDTSKIKEACKPKADLGG----EDAILQTRTYD 199
Query: 203 ISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTVRGVLYVHL 254
+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +KTV + HL
Sbjct: 200 LYITYDKYYQTPRLWLFGYDEQRRPLTVENMYEDISQDHVKKTVTIENHPHL 251
>sp|Q6GQE7|ATG3_XENLA Ubiquitin-like-conjugating enzyme ATG3 OS=Xenopus laevis GN=atg3
PE=2 SV=1
Length = 313
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 146/263 (55%), Gaps = 25/263 (9%)
Query: 5 QKFYGIFKGTVEKITSHRTV----SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPS 60
Q + KG ++ + T S FKE GV++ EF+ AGD+LV CPTW W +GE S
Sbjct: 2 QNVFNTVKGKALEVAEYLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEES 61
Query: 61 KRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLAT--HGKPKA 117
K K YLP DKQFL+T+NVPC +R +E E E +++ +D D GW+ T H
Sbjct: 62 KIKPYLPNDKQFLMTKNVPCYKRCKQMEYSDE---QEAIIEEDDGDGGWVDTFHHTGLSG 118
Query: 118 KCDEDEDDNLPSMEAVEISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDP 177
+ ++ L + + + + N V GE DM +Y E ++EN D
Sbjct: 119 VTEAVKEITLETQDCGKTTDNIAVCDDDDDDEGE------AADMEDYEE-SGLLEN--DD 169
Query: 178 ATLPSTYLV-AHEPD-----DDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTE 231
AT+ ++ + A +P +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L E
Sbjct: 170 ATVDTSKIKEACKPKADLGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRRPLAVE 229
Query: 232 LILEDVSQDHARKTVRGVLYVHL 254
+ ED+SQDH +KTV + HL
Sbjct: 230 NMYEDISQDHVKKTVTIENHPHL 252
>sp|Q9CPX6|ATG3_MOUSE Ubiquitin-like-conjugating enzyme ATG3 OS=Mus musculus GN=Atg3 PE=1
SV=1
Length = 314
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 136/228 (59%), Gaps = 14/228 (6%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRA 84
S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP DKQFL+T+NVPC +R
Sbjct: 26 SKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTDKQFLVTKNVPCYKRC 85
Query: 85 ASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEISKNNNVRAI 144
+ EY I+ +++ + GW+ T+ + + ++E+ + K + A+
Sbjct: 86 KQM--EYSDELEAIIEEDDGDGGWVDTYHNTGITGITEAVKEI-TLESKDSIKLQDCSAL 142
Query: 145 STYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPDDDNILRT 198
+EE+E + DM EY E + ETD ATL + +V A +D IL+T
Sbjct: 143 CD--EEDEEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAKADAGGEDAILQT 197
Query: 199 RTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
RTYD+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +KTV
Sbjct: 198 RTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTV 245
>sp|Q0VCL3|ATG3_BOVIN Ubiquitin-like-conjugating enzyme ATG3 OS=Bos taurus GN=ATG3 PE=2
SV=1
Length = 314
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 137/230 (59%), Gaps = 18/230 (7%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRA 84
S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP+ KQFL+T+NVPC +R
Sbjct: 26 SKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPSGKQFLVTKNVPCYKRC 85
Query: 85 ASVEEEYEGAGGEILVDNEDND-GWLAT-HGKPKAKCDEDEDDNLPSMEAVEISKNNNVR 142
+E E E +++ +D D GW+ T H A E + ++E+ + K +
Sbjct: 86 KQMEYSDE---LEAIIEEDDGDGGWVDTYHNTGIAGITEAVKEI--TLESKDSIKLQDCS 140
Query: 143 AISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPDDDNIL 196
A+ EEE+E + DM EY E + ETD ATL + +V +D IL
Sbjct: 141 ALCE--EEEEEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAKTDAGGEDAIL 195
Query: 197 RTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
+TRTYD+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +KTV
Sbjct: 196 QTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTV 245
>sp|Q9NT62|ATG3_HUMAN Ubiquitin-like-conjugating enzyme ATG3 OS=Homo sapiens GN=ATG3 PE=1
SV=1
Length = 314
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 135/233 (57%), Gaps = 24/233 (10%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRA 84
S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP KQFL+T+NVPC +R
Sbjct: 26 SKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRC 85
Query: 85 ASVEEEYEGAGGEILVDNEDND-GWLAT-HGKPKAKCDEDEDDNLPSMEAVEISKNNNVR 142
+E E E +++ +D D GW+ T H E +++ + + +N+R
Sbjct: 86 KQMEYSDE---LEAIIEEDDGDGGWVDTYHNTGITGITE-------AVKEITLENKDNIR 135
Query: 143 ---AISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPDDD 193
+ E+E+E + DM EY E + ETD ATL + +V +D
Sbjct: 136 LQDCSALCEEEEDEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAKTDAGGED 192
Query: 194 NILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +KTV
Sbjct: 193 AILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTV 245
>sp|Q6AZ50|ATG3_RAT Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus GN=Atg3
PE=2 SV=1
Length = 314
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 136/231 (58%), Gaps = 20/231 (8%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRA 84
S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP KQFL+T+NVPC +R
Sbjct: 26 SKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRC 85
Query: 85 ASVEEEYEGAGGEILVDNEDND-GWLATHGKP--KAKCDEDEDDNLPSMEAVEISKNNNV 141
+E E E +++ +D D GW+ T+ + ++ L S +++++ + +
Sbjct: 86 KQMEYSDE---LEAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLESKDSIKLQDCSVL 142
Query: 142 RAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPDDDNI 195
EEEE + DM EY E + ETD ATL + +V A +D I
Sbjct: 143 CDEEE-----EEEEGEAADMEEYEESGLL---ETDEATLDTRRIVEACKAKADAGGEDAI 194
Query: 196 LRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
L+TRTYD+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +KTV
Sbjct: 195 LQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTV 245
>sp|P0CM34|ATG3_CRYNJ Autophagy-related protein 3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ATG3 PE=3 SV=1
Length = 385
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 127/243 (52%), Gaps = 16/243 (6%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRA 84
S FKE G ++ EFV AGD L K P W WE GE S+ + +LP DKQ+L+TRNVPCLRRA
Sbjct: 26 SKFKEHGRITPEEFVAAGDFLTFKFPVWQWEKGESSRARDFLPPDKQYLVTRNVPCLRRA 85
Query: 85 ASVEEEYEGAGGEILVDNED--------NDGWLATH---GKPKAKCDEDEDDNLPSMEAV 133
+V+ E L+ D +D W+ATH P D DE ++P ++
Sbjct: 86 TAVDYTNADEDAEKLLSFLDDAEEAPGPDDDWVATHINRSPPHRPTDMDEIPDIP--DSP 143
Query: 134 EISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDD- 192
+ + ++ GG+ EE+E + + +E+ D A + + E +
Sbjct: 144 TTAPTREMAGLNVSSGGKLEEDEIPDIDDIPDMDEEGLEDLEDDAAVRIVHPSEAEVNST 203
Query: 193 --DNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTVRGVL 250
N+L+ RTYD I+YDK+YQTPR WL GYDE + L + +DV DHA KT+
Sbjct: 204 AGKNLLQVRTYDCIISYDKHYQTPRFWLFGYDEHKNPLTPAQVFQDVPADHAFKTMTMES 263
Query: 251 YVH 253
+ H
Sbjct: 264 FPH 266
>sp|P0CM35|ATG3_CRYNB Autophagy-related protein 3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ATG3 PE=3 SV=1
Length = 385
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 127/243 (52%), Gaps = 16/243 (6%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRA 84
S FKE G ++ EFV AGD L K P W WE GE S+ + +LP DKQ+L+TRNVPCLRRA
Sbjct: 26 SKFKEHGRITPEEFVAAGDFLTFKFPVWQWEKGESSRARDFLPPDKQYLVTRNVPCLRRA 85
Query: 85 ASVEEEYEGAGGEILVDNED--------NDGWLATH---GKPKAKCDEDEDDNLPSMEAV 133
+V+ E L+ D +D W+ATH P D DE ++P ++
Sbjct: 86 TAVDYTNADEDAEKLLSFLDDAEEAPGPDDDWVATHINRSPPHRPTDMDEIPDIP--DSP 143
Query: 134 EISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDD- 192
+ + ++ GG+ EE+E + + +E+ D A + + E +
Sbjct: 144 TTAPTREMAGLNVSSGGKLEEDEIPDIDDIPDMDEEGLEDLEDDAAVRIVHPSEAEVNST 203
Query: 193 --DNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTVRGVL 250
N+L+ RTYD I+YDK+YQTPR WL GYDE + L + +DV DHA KT+
Sbjct: 204 AGKNLLQVRTYDCIISYDKHYQTPRFWLFGYDEHKNPLTPAQVFQDVPADHAFKTMTMES 263
Query: 251 YVH 253
+ H
Sbjct: 264 FPH 266
>sp|A7KAL4|ATG3_PENCW Autophagy-related protein 3 OS=Penicillium chrysogenum (strain ATCC
28089 / DSM 1075 / Wisconsin 54-1255) GN=atg3 PE=3 SV=1
Length = 363
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 122/239 (51%), Gaps = 41/239 (17%)
Query: 24 VSAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFLITRNVPCLR 82
S F+ G ++ EFVLAGD LV K PTWSW ++ P+KR SYLP KQFL+TR VPC R
Sbjct: 21 TSTFRNTGQITPEEFVLAGDYLVYKFPTWSWADASSPAKRVSYLPDGKQFLVTRGVPCHR 80
Query: 83 RA-------ASVEEEY------EGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPS 129
R A +E+E G GGE V ++ DGWL T G A D D+ +
Sbjct: 81 RLNDNFAGDAGLEDEIVRDFLSGGDGGEGTVADDGEDGWLRTGGGRDAGADHDKQE---- 136
Query: 130 MEAVEISKNNNVRAI--STYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVA 187
++ +VR + S G +EE+++ E ++ ++II D + PS
Sbjct: 137 ------ARIRDVRTVDESGNLGEQEEDDDIPDMEDEDDDEEAIIRETDDQSGTPSL---- 186
Query: 188 HEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
RTY + ITY +Y+TPR++L+GY L L++ED+ D+ KTV
Sbjct: 187 -----------RTYTLYITYSNFYRTPRLYLSGYLSPSEPLPPHLMMEDIVGDYKDKTV 234
>sp|A7F172|ATG3_SCLS1 Autophagy-related protein 3 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=atg3 PE=3 SV=1
Length = 362
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 118/247 (47%), Gaps = 46/247 (18%)
Query: 15 VEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEP-SKRKSYLPADKQFL 73
+ + T S F+ G ++ EFV AGD LV K PTWSW P SKR SYLPA KQFL
Sbjct: 11 LREFTPVSNTSTFRTNGQITPEEFVAAGDYLVFKFPTWSWADASPTSKRASYLPAGKQFL 70
Query: 74 ITRNVPCLRRAASVEEEYEGAGGE---ILVDNED-----------NDGWLATHGKPKAKC 119
+TR VPC RR +++++ G G ++ D ED DGWL T G
Sbjct: 71 VTRGVPCHRR---LDDDFAGEAGHDETVVGDGEDFRGTGHSPGDDEDGWLRTGG------ 121
Query: 120 DEDEDDNLPSMEAVEISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPAT 179
+ A + ++ +VR + ++ +M E + + I + D
Sbjct: 122 ----------LAASQEARARDVRTV-----------DESGEMGEREDDEDDIPDMEDEDD 160
Query: 180 LPSTYLVAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQ 239
+ + D+ N R RTY I I Y YY+TPR++L+GY S L L++ED+
Sbjct: 161 DDEAIIRDPKADNANSSR-RTYTIYIAYTPYYRTPRLYLSGYLSSSQPLPPHLMMEDIVG 219
Query: 240 DHARKTV 246
D+ KTV
Sbjct: 220 DYKDKTV 226
>sp|Q0U388|ATG3_PHANO Autophagy-related protein 3 OS=Phaeosphaeria nodorum (strain SN15 /
ATCC MYA-4574 / FGSC 10173) GN=ATG3 PE=3 SV=1
Length = 350
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 123/243 (50%), Gaps = 45/243 (18%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFLI 74
E+ + S F+E G ++ EFVLAGD LV K P+W W ++ KR YLP KQ+L+
Sbjct: 15 ERTAAISHTSTFRETGQITPEEFVLAGDFLVFKFPSWQWGDASSAGKRVPYLPEGKQYLM 74
Query: 75 TRNVPCLRRAASVEEEYEGAGG--EILV-------DNEDNDGWLATHGKPKAKCDEDEDD 125
TR VPC RR +++ + G G E +V + D+DGWL T G
Sbjct: 75 TRGVPCHRR---LDDNFAGEAGQDETIVGDGFAGSEGADDDGWLRTGG------------ 119
Query: 126 NLPSMEAVEISKNNNVRAI--STYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPST 183
M A + +K +VR + S G EEE+E IPDM + ++ + I + + +
Sbjct: 120 ----MAASQEAKVRDVRTVDESGNLGAAEEEDE-IPDMEDMDDDEEAIIRDPQGGSSSTA 174
Query: 184 YLVAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHAR 243
L RTY + I Y +Y+TPR++L+GY + + LK + ++ED+ D+
Sbjct: 175 PL-------------RTYTLYICYSAHYRTPRLYLSGYGATSVPLKPQEMMEDIVGDYKD 221
Query: 244 KTV 246
KTV
Sbjct: 222 KTV 224
>sp|A1DF15|ATG3_NEOFI Autophagy-related protein 3 OS=Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg3 PE=3
SV=1
Length = 353
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 123/232 (53%), Gaps = 38/232 (16%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFLITRNVPCLRR 83
S F+ G ++ EFVLAGD LV K PTW+W ++ P+KR SYLP KQFL+TR VPC RR
Sbjct: 22 STFRTTGQITPEEFVLAGDYLVYKFPTWAWADASSPAKRVSYLPPGKQFLVTRGVPCHRR 81
Query: 84 AASVEEEYEGAGG---EIL------VDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVE 134
+ E + G G EI+ D +D DGWL T G E + + + + V+
Sbjct: 82 ---LNENFAGDAGHEDEIVRDMLSGADADDGDGWLRTGGG--RDLAEKQAERIKDVRTVD 136
Query: 135 ISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDN 194
S N G E++EEDIPDM + ++ + I E PA +T +
Sbjct: 137 ESGN---------MGEREDDEEDIPDMEDDDDDEEAIIRE--PAGKSTTQPI-------- 177
Query: 195 ILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
RTY++ ITY +Y+TPR++L+GY L L++ED+ D+ KTV
Sbjct: 178 ----RTYNLYITYSNFYRTPRLYLSGYLSPSEPLPPHLMMEDIVGDYKDKTV 225
>sp|A1CAN8|ATG3_ASPCL Autophagy-related protein 3 OS=Aspergillus clavatus (strain ATCC
1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=atg3 PE=3 SV=1
Length = 358
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 120/229 (52%), Gaps = 30/229 (13%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFLITRNVPCLRR 83
S F+ G ++ EFVLAGD LV K P+WSW ++ P+KR SYLP KQFL+TR VPC RR
Sbjct: 22 STFRTTGQITPEEFVLAGDYLVYKFPSWSWADASSPAKRVSYLPPGKQFLVTRGVPCHRR 81
Query: 84 AASVEEEYEGAGG---EILVD---NEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEISK 137
+ E + G G EI+ D +D DGWL T G E D + V+ +
Sbjct: 82 ---LNENFAGDAGHEDEIVRDMLAGDDGDGWLRTGGG--RDLAEGHADRTGDVRTVDEAG 136
Query: 138 NNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNILR 197
N R +EEEEE E ++ ++II +PA ST +P
Sbjct: 137 NIGEREEGD----DEEEEEIPDMEDEDDDEEAIIR---EPAGTSSTT----QP------- 178
Query: 198 TRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
RTY++ ITY +Y+TPR++L+GY L L++ED+ D+ KTV
Sbjct: 179 IRTYNLYITYSNFYRTPRLYLSGYLSPSEPLPPHLMMEDIVGDYKDKTV 227
>sp|O43035|ATG3_SCHPO Autophagy-related protein 3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=atg3 PE=3 SV=1
Length = 275
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 118/251 (47%), Gaps = 51/251 (20%)
Query: 3 LQQKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKR 62
+ Q+ F E IT S F+ G++S EFVLAGD LVSK PTWSWE G+ +
Sbjct: 1 MAQRLTSAFLNWREHITPASKTSDFENTGMISPEEFVLAGDYLVSKFPTWSWECGD--RI 58
Query: 63 KSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDED 122
+ +LP DKQ+L+TR+V C++R ++ E VD E +D T K
Sbjct: 59 RGFLPKDKQYLVTRHVFCVQRNINI------GVNEEWVDIETDD----TRNK-------- 100
Query: 123 EDDNLPSMEAVEISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPS 182
+ + AIS+ D D+A + +D LP
Sbjct: 101 -------------DDDQDDDAISSI-------HSDTSDIASAERLKGQSKELSDSGPLP- 139
Query: 183 TYLVAHEPDDDNILRT-------RTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILE 235
+ E DDD ++ R YD+ I YDKYY+TPR++L G++ LL + I E
Sbjct: 140 ---LKDEEDDDQMVSPVIKEDEGRYYDLYIVYDKYYRTPRLFLRGWNAGGQLLTMKDIYE 196
Query: 236 DVSQDHARKTV 246
DVS +HA KTV
Sbjct: 197 DVSGEHAGKTV 207
>sp|Q51LD2|ATG3_MAGO7 Autophagy-related protein 3 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=ATG3 PE=3 SV=1
Length = 350
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 104/231 (45%), Gaps = 35/231 (15%)
Query: 24 VSAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFLITRNVPCLR 82
S F++ G ++ EFV AGD LV K PTWSW ++ S+R S+LP KQFL+TRNVPC R
Sbjct: 21 TSTFRQTGEITPEEFVAAGDYLVFKFPTWSWGDADSESRRASHLPPGKQFLVTRNVPCNR 80
Query: 83 RA-------ASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEI 135
R A +EE G E D+DGWL T G + + +
Sbjct: 81 RLNENFAGDAGLEEAVVDDGDEFKGSKGDDDGWLRTGG----------------LSSSQP 124
Query: 136 SKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNI 195
K VR + +D + E +PD + ++
Sbjct: 125 LKAREVRTV-----------DDAGNAGERAQPDDDDDIPDMEDEEDDEAIIRDTDASGQT 173
Query: 196 LRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
RTY + I Y YY+TPR++L+GY + L ++ED+ D+ KTV
Sbjct: 174 SSRRTYTLYIMYSPYYRTPRLYLSGYGANGQPLPPHNMMEDIMGDYKDKTV 224
>sp|A7KAI2|ATG3_PICAN Autophagy-related protein 3 OS=Pichia angusta GN=ATG3 PE=3 SV=1
Length = 339
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 123/241 (51%), Gaps = 23/241 (9%)
Query: 11 FKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADK 70
F E +T S F + G ++ EFV AGD LV K PTW W SK++ +LP DK
Sbjct: 10 FSSLREYLTPISHKSTFTDTGEITPEEFVAAGDYLVYKFPTWQWSPAPESKKRDFLPNDK 69
Query: 71 QFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKA--KCDEDEDDNLP 128
QFL+TR+VP RAA E + A E+ DGW +T+ A +C+ ED+
Sbjct: 70 QFLVTRHVPSYVRAADYEHTEKEA-----EMMEEEDGWTSTNVDSVAPQRCNT-EDERRH 123
Query: 129 SMEAVEISKNNNV---RAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYL 185
S++ +E++++ ++ + G + E DI ++ + +S + N+
Sbjct: 124 SIKYIEMTESGASSPEEGLAQHEGSGKHEINDIDELIDETAEESDLANDAGQGG------ 177
Query: 186 VAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKT 245
+ ++P + R YD+ ITY Y+ P+++L G++ + + L + ED++ D+ +KT
Sbjct: 178 IINDP------KKRNYDLYITYSTSYRVPKMYLVGFNSNGVPLSPNEMFEDIASDYRQKT 231
Query: 246 V 246
V
Sbjct: 232 V 232
>sp|Q4WUE5|ATG3_ASPFU Autophagy-related protein 3 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=atg3 PE=3
SV=1
Length = 353
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 127/232 (54%), Gaps = 38/232 (16%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFLITRNVPCLRR 83
S F+ G ++ EFVLAGD LV K PTWSW ++ P+KR SYLP KQFL+TR VPC RR
Sbjct: 22 STFRTTGQITPEEFVLAGDYLVYKFPTWSWADASSPAKRVSYLPPGKQFLVTRGVPCHRR 81
Query: 84 AASVEEEYEGAGG---EILVD------NEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVE 134
+ E + G G EI+ D +D+DGWL T G E + + + + V+
Sbjct: 82 ---LNENFAGDAGHEDEIVRDMLSGADADDDDGWLRTGGG--RDLAEKQAERIKDVRTVD 136
Query: 135 ISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDN 194
S N G +E++EEDIPDM + ++ + I E PA +T +P
Sbjct: 137 ESGN---------MGEQEDDEEDIPDMEDDDDDEEAIIRE--PAGKSTT-----QP---- 176
Query: 195 ILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
TRTY++ ITY +Y+TPR++L+GY L L++ED+ D+ KTV
Sbjct: 177 ---TRTYNLYITYSNFYRTPRLYLSGYLSPSEPLPPHLMMEDIVGDYKDKTV 225
>sp|Q2H427|ATG3_CHAGB Autophagy-related protein 3 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=ATG3 PE=3 SV=1
Length = 338
Score = 100 bits (250), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 37/246 (15%)
Query: 7 FYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGE-PSKRKSY 65
Y ++ T S F+ G ++ EFV AGD LV K P+W+W E P+KR ++
Sbjct: 4 IYSTVNSLRDRYTPASHTSTFRNTGEITPEEFVAAGDYLVFKFPSWTWSDAETPAKRVAH 63
Query: 66 LPADKQFLITRNVPCLRRAASVEEEYEGAGG--EILVD---NEDNDGWLATHGKPKAKCD 120
LP +KQ+L+TRNVPC RR + +++ G G E +V+ N +DGWL T G
Sbjct: 64 LPPEKQYLVTRNVPCHRR---LNDDFAGDAGHEEAVVEGGKNSGDDGWLRTGG------- 113
Query: 121 EDEDDNLPSMEAVEISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATL 180
+ + + K +VR + ++ ++ D ++ D I + E +
Sbjct: 114 ---------LASSQPLKARDVRTV--------DDAGNVADRGAIDDEDDIPDMEEEEDDE 156
Query: 181 PSTYLVAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQD 240
+H +RTY + ITY +Y+TPR+++ GY + L L++ED+ D
Sbjct: 157 AIIQDGSHGKHSG----SRTYSLYITYSPWYKTPRMYMLGYQPNGQALIPHLMMEDIVGD 212
Query: 241 HARKTV 246
+ KTV
Sbjct: 213 YKDKTV 218
>sp|Q2U7R4|ATG3_ASPOR Autophagy-related protein 3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=atg3 PE=3 SV=1
Length = 356
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 119/233 (51%), Gaps = 40/233 (17%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFLITRNVPCLRR 83
S F+ G ++ EFVLAGD LV K P+WSW ++ P+KR SYLP KQFL+TR VPC RR
Sbjct: 22 STFRNTGQITPEEFVLAGDYLVYKFPSWSWADASNPAKRVSYLPPGKQFLVTRGVPCHRR 81
Query: 84 AASVEEEYEGAGG---EILVD-------NEDNDGWLATHGKPKAKCDEDEDDNLPSMEAV 133
+ + + G G E++ D D+DGWL T G + + +++ + + V
Sbjct: 82 ---LNDNFAGDAGHDDELVRDMLSGGTGGVDDDGWLRTGGGQDSA--DRQENRIKDVRTV 136
Query: 134 EISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDD 193
+ S N R + E+E+ ++ ++II + T P
Sbjct: 137 DESGNMGEREEEEDEIPDMEDED--------DDEEAIIRDPASGTTQP------------ 176
Query: 194 NILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
TRTY++ ITY +Y+TPR++++GY L L++EDV D+ KTV
Sbjct: 177 ----TRTYNLYITYSNFYRTPRLYMSGYLSPSEPLPPHLMMEDVVGDYKDKTV 225
>sp|Q7SDY2|ATG3_NEUCR Autophagy-related protein 3 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=atg-3 PE=3 SV=1
Length = 352
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 111/246 (45%), Gaps = 47/246 (19%)
Query: 15 VEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFL 73
++K T S F+ G ++ EFV AGD L K P+WSW ++ PSKR +LP KQFL
Sbjct: 12 LDKYTPVSHTSTFRNTGQITPEEFVAAGDYLTFKFPSWSWADADSPSKRLPFLPPGKQFL 71
Query: 74 ITRNVPCLRRAASVEEEYEGAGG--EILVDNE----DNDGWLATHGKPKAKCDEDEDDNL 127
+TR+VPC RR + +++ G G E LV+ D+DGWL T
Sbjct: 72 VTRHVPCHRR---LNDDFAGDAGHEEALVEGNKGGADDDGWLRTG--------------- 113
Query: 128 PSMEAVEISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVA 187
SM + + + VR + D + + + E++
Sbjct: 114 -SMTSSQPLRVREVRTVD--------------DAGNVGDREVVDEDDIPDMEDDDDDEAI 158
Query: 188 HEPDDDNILRT-------RTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQD 240
+ DN R RTY + ITY Y+ PR++++GY + L L++ED+ D
Sbjct: 159 IRAEGDNSNRQDNISTGKRTYTLYITYANAYKCPRMYMSGYLSNGQPLPPHLMMEDIVGD 218
Query: 241 HARKTV 246
+ KTV
Sbjct: 219 YKDKTV 224
>sp|A3LX85|ATG3_PICST Autophagy-related protein 3 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=ATG3 PE=3 SV=2
Length = 318
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 114/241 (47%), Gaps = 67/241 (27%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRA 84
S F G +S EFV AGD LV K PTW W + + +KS+LPADKQFLITR+VP +RA
Sbjct: 20 SNFSTTGEISPEEFVQAGDYLVYKFPTWQWSTCPKNLQKSFLPADKQFLITRHVPSYQRA 79
Query: 85 ASVEEEYEGAGGEI-------LVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEISK 137
++ GG + D+E+ DGW+ S + V ++K
Sbjct: 80 SNYL-----TGGNVDFDDDEEYEDDEEGDGWVK------------------SRKVVSVTK 116
Query: 138 NNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNI-- 195
+ G+EEE ++I D+ D +I+ + A E D DN+
Sbjct: 117 PQD---------GQEEEPQEINDI------DDLIDVTAEGA----------EDDGDNLED 151
Query: 196 -----LR-----TRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKT 245
+R R YD+ ITY Y+ P+++L G++ + + L + + ED++ D+ KT
Sbjct: 152 FDDLDIRNDGGSVRKYDMYITYSTSYRVPKMYLVGFNANGIPLTPDQMFEDINADYKDKT 211
Query: 246 V 246
Sbjct: 212 A 212
>sp|Q6BSC4|ATG3_DEBHA Autophagy-related protein 3 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=ATG3 PE=3 SV=2
Length = 324
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 110/232 (47%), Gaps = 26/232 (11%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLIT 75
E +T R S F G +S EFV AGD LV K PTW W S +K +LP DKQ+LIT
Sbjct: 11 EYLTPIRHTSDFTTTGEISPEEFVEAGDYLVYKFPTWQWSSAPDKLKKDFLPPDKQYLIT 70
Query: 76 RNVPCLRRAASVEEEYEG-AGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVE 134
++V +RA + Y G + E DGW+ +H K + D PS +
Sbjct: 71 KHVSSYQRAVT----YLGIKSDLDEDEEELEDGWVKSH-----KINND-----PSRLKTD 116
Query: 135 ISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDN 194
S N+ +T + E DI ++ + N + E+E D L T ++
Sbjct: 117 ASGENS--GGNTNDNDDTNEINDIDELIDENAEEQSSEDENDFEELVETNANSN------ 168
Query: 195 ILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
R YD+ ITY Y+ P+++L G++ + + L + + ED+S D+ KT
Sbjct: 169 ---LRKYDLYITYSTSYRVPKMYLVGFNSNGIPLLPKQMFEDISGDYRDKTA 217
>sp|Q5ABQ7|ATG3_CANAL Autophagy-related protein 3 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=ATG3 PE=3 SV=1
Length = 333
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 29/228 (12%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSK-RKSYLPADKQFLITRNVPCLRR 83
S F G +S EFV AGD LV K PTW W + P +KS+LP DKQ+L+TR+VP +R
Sbjct: 21 SNFVTTGEISPEEFVKAGDYLVYKFPTWQWGNDCPKNLQKSFLPPDKQYLVTRHVPSYQR 80
Query: 84 AAS--VEEEYEGAG---GEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEISKN 138
A++ E+ +GA + + ED +GW+ + K K +D D+ +I+K
Sbjct: 81 ASNYLTGEDKKGANPEEDDEEEEEEDEEGWVKS--KKIHKVIDDTHDS-------QINKG 131
Query: 139 NNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNILRT 198
+ I + EE+E D I ++E D ++ +D +
Sbjct: 132 EEINDIDDFIDENAEEQEH----------DQIGDHELDDDEFDDLDII----NDSKNNKL 177
Query: 199 RTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
R +D+ ITY Y+ P+++L G+D + + L + + ED++ D+ KT
Sbjct: 178 RRFDLYITYSTSYRVPKLYLVGFDSNGIPLLPQQMFEDINSDYKDKTA 225
>sp|A6S8P6|ATG3_BOTFB Autophagy-related protein 3 OS=Botryotinia fuckeliana (strain
B05.10) GN=atg3 PE=3 SV=1
Length = 347
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 62/115 (53%), Gaps = 19/115 (16%)
Query: 15 VEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEP-SKRKSYLPADKQFL 73
+ + T S F+ G ++ EFV AGD LV K PTWSW P SKR +YLPA KQFL
Sbjct: 11 LREFTPVSNTSTFRTNGQITPEEFVAAGDYLVFKFPTWSWADASPTSKRANYLPAGKQFL 70
Query: 74 ITRNVPCLRRAASVEEEYEGAGGE---ILVDNE------------DNDGWLATHG 113
+TR VPC RR +++++ G G ++ D E D DGWL T G
Sbjct: 71 VTRGVPCHRR---LDDDFAGDAGHDETVVRDGEDFRGDGPHSPGDDEDGWLRTGG 122
>sp|A5DN42|ATG3_PICGU Autophagy-related protein 3 OS=Meyerozyma guilliermondii (strain
ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 /
NRRL Y-324) GN=ATG3 PE=3 SV=3
Length = 293
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 44/223 (19%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRA 84
S ++ G +S EFV AGD LV K PTW W S +K +LP DKQFLIT++VP +RA
Sbjct: 20 SNYETSGEISPEEFVQAGDYLVYKFPTWQWGSAPKKLQKDFLPPDKQFLITKHVPSYQRA 79
Query: 85 ASVEEEYEG-AGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEISKNNNVRA 143
S Y G + E +DGW+ +H ++ + R
Sbjct: 80 QS----YLGNTEDLAEDEEELDDGWVKSH---------------------RLTHEDPKRD 114
Query: 144 ISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNILRTRTYDI 203
I+T ++ +PD+ + D I+ + + A E D R YD+
Sbjct: 115 IAT--------DKKVPDIEDL---DDFIDEDAEDAD-------GEEFQDLGNSNLRRYDL 156
Query: 204 SITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
ITY Y+ P+++L G++++ + L + ED+S D+ KT
Sbjct: 157 YITYSTSYRVPKMYLVGFNDNGIPLLPHQMFEDISGDYRDKTA 199
>sp|Q6CL19|ATG3_KLULA Autophagy-related protein 3 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=ATG3 PE=3 SV=1
Length = 302
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 100/238 (42%), Gaps = 45/238 (18%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESG--EPSKRKSYLPADKQFL 73
E +T S F+ G L+ EFV AGD LV PTW W + K +LP DKQFL
Sbjct: 11 EYLTPISHTSTFETSGQLTPEEFVKAGDYLVHMFPTWKWNGNDFQNVHHKDFLPNDKQFL 70
Query: 74 ITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWL-----ATHGKPKAKCDEDEDDNLP 128
+T+ VPC RA + E + ++ DGW + + K+ + D+ +
Sbjct: 71 VTKKVPCKLRANNYLELDDTETKDV------GDGWALQEEHSQDSERKSTNNADDSELPE 124
Query: 129 SMEAVEISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAH 188
+E + I + + E ++DI D+ P+TL
Sbjct: 125 ELEELHIVDDGDDEEYDDQLYDNEFADDDIVDIR--------------PSTL-------- 162
Query: 189 EPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
R YD+ ITY Y+ P+++L GYD L + + ED++ D+ KT
Sbjct: 163 ----------RFYDLYITYSTSYRVPKMYLCGYDNDGTPLSPDQMFEDIAADYRSKTA 210
>sp|A7TK16|ATG3_VANPO Autophagy-related protein 3 OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=ATG3 PE=3 SV=1
Length = 318
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 43/236 (18%)
Query: 20 SHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFLITRNV 78
SH+ S F G ++ EFV AGD L PTW W ++G +++LP DKQFL+ R V
Sbjct: 17 SHK--STFLSSGQITPDEFVQAGDYLCHMFPTWEWNKAGNDVLFRNFLPEDKQFLVMRKV 74
Query: 79 PCLRRAASVEEEYEGAGGEIL--VDNEDN---DGWLATHGKPKAKCDEDEDDNLP--SME 131
PC RA + A + +++ED +GW+ G E D+L S+
Sbjct: 75 PCNVRAKQFVNIDDSASEAFVQGINDEDGSIENGWMIGGG---------ETDHLSKHSLS 125
Query: 132 AVEIS-KNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEP 190
+ +++ NN + + +E DI D+ E IE+ D P
Sbjct: 126 SGDVTPSGNNTKTM-------DETTPDIDDLME----SMGIEDTDDIIDTPQ-------- 166
Query: 191 DDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
N R R YD+ ITY Y+ P++++ G++ S L E + ED++ D+ KT
Sbjct: 167 ---NTDR-RYYDLYITYSTSYKVPKMYIVGFNGSGSPLTPEEMFEDIAPDYRSKTA 218
>sp|Q6C4Q9|ATG3_YARLI Autophagy-related protein 3 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=ATG3 PE=3 SV=1
Length = 366
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLIT 75
E +T S F+ G ++ EFV AGD LV K PTWSW S SK + +LP DKQ L+T
Sbjct: 89 EYLTPVSNTSTFRTTGEITPDEFVKAGDYLVEKFPTWSWASASKSKVRDFLPPDKQVLVT 148
Query: 76 RNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDDN 126
R+VP RA++V G + + E+ DGW + G K D D DD
Sbjct: 149 RHVPSHVRASTV-------SGPVTL-GEEEDGW-TSFGVANTK-DADGDDT 189
>sp|P40344|ATG3_YEAST Autophagy-related protein 3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ATG3 PE=1 SV=1
Length = 310
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 31/223 (13%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSW--ESGEPSKRKSYLPADKQFLITRNVPCLR 82
S F G ++ EFV AGD L PTW W ES + S R +LP +KQFLI R VPC +
Sbjct: 20 STFLTTGQITPEEFVQAGDYLCHMFPTWKWNEESSDISYR-DFLPKNKQFLIIRKVPCDK 78
Query: 83 RAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEISKNNNVR 142
RA E+ E G ++++ DG DEDD L + S+ +V+
Sbjct: 79 RA---EQCVEVEGPDVIMKGFAEDG--------------DEDDVLEYIG----SETEHVQ 117
Query: 143 AISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNILRTRTYD 202
ST GG ++ D + +E +E + + + A ++ + R YD
Sbjct: 118 --STPAGGTKDSSID-----DIDELIQDMEIKEEDENDDTEEFNAKGGLAKDMAQERYYD 170
Query: 203 ISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKT 245
+ I Y Y+ P++++ G++ + L E + ED+S D+ KT
Sbjct: 171 LYIAYSTSYRVPKMYIVGFNSNGSPLSPEQMFEDISADYRTKT 213
>sp|A6ZS81|ATG3_YEAS7 Autophagy-related protein 3 OS=Saccharomyces cerevisiae (strain
YJM789) GN=ATG3 PE=3 SV=1
Length = 310
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 31/223 (13%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSW--ESGEPSKRKSYLPADKQFLITRNVPCLR 82
S F G ++ EFV AGD L PTW W ES + S R +LP +KQFLI R VPC +
Sbjct: 20 STFLTTGQITPEEFVQAGDYLCHMFPTWKWNEESSDISYR-DFLPKNKQFLIIRKVPCDK 78
Query: 83 RAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEISKNNNVR 142
RA E+ E G ++++ DG DEDD L + S+ +V+
Sbjct: 79 RA---EQCVEVEGPDVIMKGFAEDG--------------DEDDVLEYIG----SETEHVQ 117
Query: 143 AISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNILRTRTYD 202
ST GG ++ D + +E +E + + + A ++ + R YD
Sbjct: 118 --STPAGGTKDSSID-----DIDELIQDMEIKEEDENDDTEEFNAKGGLAKDMAQERYYD 170
Query: 203 ISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKT 245
+ I Y Y+ P++++ G++ + L E + ED+S D+ KT
Sbjct: 171 LYIAYSTSYRVPKMYIVGFNSNGSPLSPEQMFEDISADYRTKT 213
>sp|Q6FQJ2|ATG3_CANGA Autophagy-related protein 3 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ATG3 PE=3
SV=1
Length = 309
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 43/227 (18%)
Query: 20 SHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFLITRNV 78
SH+ S F G ++ EFV AGD L PTW W + + +K + +LP DKQFL+ R V
Sbjct: 17 SHK--STFLTTGQITPEEFVQAGDYLCHMFPTWKWNDMADDNKYRDFLPKDKQFLVIRKV 74
Query: 79 PCLRRAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEISKN 138
PC RA +V E G D + A + S+E + +SK+
Sbjct: 75 PCSERAQAVVTMDEIENGT------STDAFSAADDEDNDDD---------SIEIIPVSKS 119
Query: 139 NNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNILRT 198
++ G + N+ + I E + +VA++ ++
Sbjct: 120 SS--------GAD-------------NDVNDIDELMEEMELEEDDDIVANKTNE----ML 154
Query: 199 RTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKT 245
R YD+ ITY Y+ P++++ G++ + L + + ED++ D+ +KT
Sbjct: 155 RYYDLFITYSTSYRVPKMYIVGFNGNGTPLTPKEMFEDITPDYRKKT 201
>sp|A5DVH6|ATG3_LODEL Autophagy-related protein 3 OS=Lodderomyces elongisporus (strain
ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL
YB-4239) GN=ATG3 PE=3 SV=1
Length = 362
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRA 84
S F G +S EFV AGD LV K PTW W S +K +LP DKQ L+TR+VP +RA
Sbjct: 20 SNFLTTGEISPEEFVKAGDYLVYKFPTWQWASCPKDLQKLFLPTDKQVLVTRHVPSHQRA 79
Query: 85 ASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDD 125
E +EG E+ +D +D D L K + + DD
Sbjct: 80 ---NEYFEGE-FEVEIDEKDRDLALGNESNLKNGENGENDD 116
>sp|Q755K1|ATG3_ASHGO Autophagy-related protein 3 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ATG3 PE=3 SV=2
Length = 282
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 91/223 (40%), Gaps = 56/223 (25%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSK-RKSYLPADKQFLITRNVPC-LR 82
S F+ G ++ EF+ AGD L PTW W + + +LP D+QFL+TR VP +R
Sbjct: 20 STFENTGQITPEEFIKAGDYLCHMFPTWRWNQQQGGMVYRDFLPQDRQFLVTRKVPSNMR 79
Query: 83 RAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEISKNNNVR 142
A SV GGE + + W+ + A E+ D +
Sbjct: 80 AADSV-----NVGGE--EETSAGEYWVLQPQQESADGGEEIDID---------------- 116
Query: 143 AISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNILRTRTYD 202
E +E DI D + E D L ++ TR YD
Sbjct: 117 --------EMLQEMDIEDQS----------GEQDIIQLRPSH-------------TRFYD 145
Query: 203 ISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKT 245
+ ITY Y+ P+++L G++ L + + +D++ D+ KT
Sbjct: 146 LYITYSTSYRVPKMYLVGFNNDGTPLTPQQMFQDIAPDYRTKT 188
>sp|C8VDI2|ATG3_EMENI Autophagy-related protein 3 OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=atg3
PE=3 SV=1
Length = 365
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 201 YDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
Y++ ITY +Y+TPR++L+GY L +L++ED+ D+ KTV
Sbjct: 182 YNLYITYSNFYRTPRLYLSGYLSPSEPLPPKLMMEDIVGDYKDKTV 227
>sp|Q47FA0|DNLJ_DECAR DNA ligase OS=Dechloromonas aromatica (strain RCB) GN=ligA PE=3
SV=1
Length = 683
Score = 34.3 bits (77), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 53 SWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWLATH 112
SW GEP++ L A K ++T +P L+R + + E AGG++ ++
Sbjct: 593 SWPEGEPAQAGPQLLAGKTLVLTGTLPTLKRDEA-KALVEAAGGKVAGSVSKKTDYVVAG 651
Query: 113 GKPKAKCDEDEDDNLPSMEAVEISK 137
+ +K ++ ++ +P ++ E+ K
Sbjct: 652 EEAGSKLEKAQELGVPVIDEAELMK 676
>sp|Q6FVT7|MMM1_CANGA Maintenance of mitochondrial morphology protein 1 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=MMM1 PE=3 SV=1
Length = 431
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 59 PSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAK 118
P K + LP D + R CL + EE E G + DNE N +L P+ K
Sbjct: 297 PKKCTAALPIDLAVSMVRFQACLTVSLITAEELEFTTGNKIDDNEKNGYYLVFSFTPEYK 356
Query: 119 CDED 122
D D
Sbjct: 357 IDFD 360
>sp|Q12163|NBP2_YEAST NAP1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NBP2 PE=1 SV=1
Length = 236
Score = 31.2 bits (69), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 23/90 (25%)
Query: 147 YFGGEEEEEEDIPDMAE----YNEPDSIIENETDPATLPSTYLVAH--------EPDDDN 194
YF G+ EE+E + D + YN+ SI TLP Y+V EP++DN
Sbjct: 76 YFDGDNEEDEMVSDSSNGEDTYNKRQSI--------TLPDDYIVNQRAVALYDFEPENDN 127
Query: 195 ILRTRTYDISITYDKYYQTPRVWLTGYDES 224
LR DI Y+ + WL +ES
Sbjct: 128 ELRLAEGDIVFI---SYKHGQGWLVAENES 154
>sp|Q12AD4|DNLJ_POLSJ DNA ligase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=ligA
PE=3 SV=1
Length = 706
Score = 30.8 bits (68), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 54 WESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEI 98
WE GEP+ + K F+IT +P L R + +++ E AGG++
Sbjct: 616 WEEGEPAAVAPKPLSGKTFVITGTLPTLSRDEA-KDKVEAAGGKV 659
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,831,154
Number of Sequences: 539616
Number of extensions: 4832292
Number of successful extensions: 12235
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 12016
Number of HSP's gapped (non-prelim): 196
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)