BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025315
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q67ZM7|PHYK2_ARATH Probable phytol kinase 2, chloroplastic OS=Arabidopsis thaliana
GN=At5g58560 PE=2 SV=2
Length = 307
Score = 281 bits (720), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/238 (57%), Positives = 173/238 (72%), Gaps = 7/238 (2%)
Query: 2 PLTTANFSICPSIFLRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVC 61
P + A FS P RI + S + RF I + +L AA++ P+N VLSDVC
Sbjct: 26 PPSLAFFSPIPRFLTVRI---ATSFRSSSRFPATKIRKSSL----AAVMFPENSVLSDVC 78
Query: 62 ASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILAS 121
A V++ VA SCL W E +R +FDQKL RKLVHI+IGL+FMLCWPLFSSG +GA+ AS
Sbjct: 79 AFGVTSIVAFSCLGFWGEIGKRGIFDQKLIRKLVHINIGLVFMLCWPLFSSGIQGALFAS 138
Query: 122 LTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPN 181
L PG+NI+RMLL+G G++ DE T+KSMSR+GDRRELL GPLYY ++IT AC+ YW++SP
Sbjct: 139 LVPGLNIVRMLLLGLGVYHDEGTIKSMSRHGDRRELLKGPLYYVLSITSACIYYWKSSPI 198
Query: 182 GIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGSRHQVSS 239
IA ICNLCAGDG AD+VGRRFG KLPYN+NKS AGS MA+AGFL+S+ + +S
Sbjct: 199 AIAVICNLCAGDGMADIVGRRFGTEKLPYNKNKSFAGSIGMATAGFLASVAYMYYFAS 256
>sp|Q2N2K0|PHYK3_SOYBN Probable phytol kinase 3, chloroplastic OS=Glycine max PE=2 SV=1
Length = 319
Score = 276 bits (705), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/195 (67%), Positives = 156/195 (80%)
Query: 45 PSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFM 104
P + +L +P++SDV A+A+S VA S LRL++ETA+RDLFDQKLNRKLVHISIGLIFM
Sbjct: 74 PPRSTMLHHDPLVSDVYATAISGVVALSFLRLFQETAKRDLFDQKLNRKLVHISIGLIFM 133
Query: 105 LCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYY 164
LC PLFS+ + A+L PG+NI RML++G G+ KDEATVKSMSR+GD RELL GPLYY
Sbjct: 134 LCXPLFSTETWASFFAALIPGINIFRMLVIGLGILKDEATVKSMSRFGDYRELLKGPLYY 193
Query: 165 AITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMAS 224
A TITLA +IYWR SP IAAICNLCAGDG AD+VGRR G K+PYN+NKS AGS AMA+
Sbjct: 194 AATITLAAIIYWRTSPISIAAICNLCAGDGMADIVGRRLGGEKIPYNKNKSFAGSIAMAT 253
Query: 225 AGFLSSIGSRHQVSS 239
AGFL+SIG SS
Sbjct: 254 AGFLTSIGYMWYFSS 268
>sp|Q5N9J9|PHYK2_ORYSJ Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp.
japonica GN=Os01g0832000 PE=2 SV=3
Length = 304
Score = 246 bits (628), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 141/181 (77%)
Query: 59 DVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAI 118
D+ ++AV+A VA + LR +EE A+R +F+QKLNRKLVHI+IG++F+L WPLFSSG
Sbjct: 73 DLGSAAVTAGVALALLRFFEELAKRGVFEQKLNRKLVHITIGMVFLLFWPLFSSGSYAPF 132
Query: 119 LASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRN 178
LA++ PG+NIIRMLL+G G+ K+EA VKSMSR GD RELL GPLYYA TIT A I+WR
Sbjct: 133 LAAVAPGINIIRMLLLGLGVMKNEAMVKSMSRSGDPRELLKGPLYYATTITFATSIFWRT 192
Query: 179 SPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGSRHQVS 238
SP IA ICNLCAGDG AD+VGRR G+ KLPYN NKS AGS AMA AGF++SIG H
Sbjct: 193 SPIAIALICNLCAGDGIADIVGRRLGQEKLPYNPNKSYAGSIAMALAGFMASIGYMHYFQ 252
Query: 239 S 239
S
Sbjct: 253 S 253
>sp|Q2N2K1|PHYK1_SOYBN Probable phytol kinase 1, chloroplastic OS=Glycine max PE=2 SV=1
Length = 302
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 130/216 (60%), Gaps = 9/216 (4%)
Query: 25 SPKFPP--RFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETAR 82
SP PP R Q P P A +L + A+ + +R ++E R
Sbjct: 39 SPGVPPAVRLDQ---RLPRFVVPGAG----AEDLLYNAGATVGVLGGGYALVRAFDELTR 91
Query: 83 RDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDE 142
R++ Q L+RKLVHI GL+F++ WP+FS+ P+ A+ P VN +R+L+ G + DE
Sbjct: 92 RNILQQGLSRKLVHILSGLLFLVSWPIFSNSPKARYFAAFVPLVNCLRLLVNGLSLASDE 151
Query: 143 ATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRR 202
+KS++R GD ELL GPLYY + + L+ +++WR SP G+ ++ +CAGDG AD++GRR
Sbjct: 152 GLIKSVTREGDPLELLRGPLYYVLILILSALVFWRESPIGVISLAMMCAGDGIADIIGRR 211
Query: 203 FGKRKLPYNQNKSIAGSCAMASAGFLSSIGSRHQVS 238
+G K+PYN++KS+AGS +M GFL SIG + S
Sbjct: 212 YGSMKIPYNEHKSLAGSMSMLVFGFLVSIGMLYYYS 247
>sp|Q2N2K4|PHYK_MAIZE Probable phytol kinase, chloroplastic OS=Zea mays PE=2 SV=1
Length = 303
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 113/172 (65%)
Query: 59 DVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAI 118
D + + A A S +R+++E R L ++ L+RK+VH+ G++FM WPLFS+
Sbjct: 63 DGAVTVLITAGAYSLVRVFDELTERRLIEKSLSRKVVHVLSGVLFMSSWPLFSNSTEARY 122
Query: 119 LASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRN 178
A++ P +N +R+L+ G ++ DEA VKS++R G ELL GPLYY + + + +++WR
Sbjct: 123 FAAVVPFLNSMRLLIYGLRLYTDEALVKSVTREGKPEELLRGPLYYVLVLLFSVLVFWRE 182
Query: 179 SPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSS 230
SP GI ++ + GDGFAD+VGRR+G KLP+N+ KS AGS +M +GFL S
Sbjct: 183 SPIGIVSLSMMSGGDGFADIVGRRYGSAKLPFNRKKSWAGSISMFISGFLLS 234
>sp|Q2N2K3|PHYK_WHEAT Probable phytol kinase, chloroplastic OS=Triticum aestivum PE=2
SV=1
Length = 300
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 112/175 (64%)
Query: 56 VLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPR 115
+L D A+ + A A S +R ++ R L Q L+RK+VH+ G+ FM WPLFS+
Sbjct: 60 LLRDGGATLLVTAGAYSLVRAFDALTERRLVQQSLSRKVVHVLSGVFFMASWPLFSNSTS 119
Query: 116 GAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIY 175
A++ P +N +R+L G G + DEA VKS++R G R ELL GPLYY I + + +++
Sbjct: 120 ARFFAAVVPFLNCVRLLTYGLGFYSDEALVKSVTREGKREELLRGPLYYVIVLLIIVLVF 179
Query: 176 WRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSS 230
WR+SP GI ++ + GDGFAD+VGRRFG KLP+N+ KS GS AM +GFL S
Sbjct: 180 WRDSPIGIVSLSMMSGGDGFADIVGRRFGSLKLPFNKKKSWVGSAAMFISGFLLS 234
>sp|Q9LZ76|PHYK1_ARATH Phytol kinase 1, chloroplastic OS=Arabidopsis thaliana GN=VTE5 PE=1
SV=1
Length = 304
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 110/186 (59%)
Query: 54 NPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSG 113
N +L DV A+ A + + +E +R++ Q L+RKLVHI GL+F+L WP+FS
Sbjct: 65 NSLLHDVGATVAVLGGAYALVLSFESLTKRNVIQQSLSRKLVHILSGLLFVLAWPIFSGS 124
Query: 114 PRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACV 173
A+ P VN +R+++ G + + +KS++R G ELL GPL+Y + + + V
Sbjct: 125 TEARYFAAFVPLVNGLRLVINGLSISPNSMLIKSVTREGRAEELLKGPLFYVLALLFSAV 184
Query: 174 IYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGS 233
+WR SP G+ ++ +C GDG AD++GR+FG K+PYN KS AGS +M GF SI
Sbjct: 185 FFWRESPIGMISLAMMCGGDGIADIMGRKFGSTKIPYNPRKSWAGSISMFIFGFFISIAL 244
Query: 234 RHQVSS 239
+ SS
Sbjct: 245 LYYYSS 250
>sp|Q7XR51|PHYK1_ORYSJ Probable phytol kinase 1, chloroplastic OS=Oryza sativa subsp.
japonica GN=Os04g0670700 PE=2 SV=1
Length = 314
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 112/174 (64%)
Query: 57 LSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRG 116
L D A+ + A A S +R ++ R L +Q L+RK+VH+ G++FM WPLFS+
Sbjct: 74 LRDCAATLLITAGAYSLVRAFDGLTARRLIEQNLSRKIVHVLSGVLFMSSWPLFSNSTEA 133
Query: 117 AILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYW 176
A++ P +N IR+L G + DEA VKS++R G ELL GPLYY I + ++ +++W
Sbjct: 134 RFFAAIVPLLNCIRLLTYGLRLSTDEALVKSVTREGKPEELLRGPLYYVIVLLVSVLVFW 193
Query: 177 RNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSS 230
R SP GI ++ + GDGFAD+VGRR+G KLP+N+NKS GS +M +GFL S
Sbjct: 194 RQSPIGIVSLSMMSGGDGFADIVGRRYGSAKLPFNENKSWIGSISMFISGFLLS 247
>sp|Q2N2K2|PHYK2_SOYBN Probable phytol kinase 2, chloroplastic OS=Glycine max PE=2 SV=1
Length = 292
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 106/172 (61%), Gaps = 11/172 (6%)
Query: 59 DVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAI 118
D + + A A S +R+++E R L ++ L+RK+VH+ G++FM WPLFS+
Sbjct: 63 DGAVTVLITAGAYSLVRVFDELTERRLIEKSLSRKVVHVLSGVLFMSSWPLFSNSTEARY 122
Query: 119 LASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRN 178
A++ P +N +R+L+ G ++ DEA ELL GPLYY + + + +++WR
Sbjct: 123 FAAVVPFLNSMRLLIYGLRLYTDEAL-----------ELLRGPLYYVLVLLFSVLVFWRE 171
Query: 179 SPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSS 230
SP GI ++ + GDGFAD+VGRR+G KLP+N+ KS AGS +M +GFL S
Sbjct: 172 SPIGIVSLSMMSGGDGFADIVGRRYGSAKLPFNRKKSWAGSISMFISGFLLS 223
>sp|Q9Y7T6|SEC59_SCHPO Dolichol kinase sec59 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sec59 PE=3 SV=3
Length = 504
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 87 DQKLN--RKLVHISIGLIFMLCWPLFSSGPR-------GAILASL-TPGVNIIRMLLVGS 136
D+ LN RK H + +F+ P+ P G + L G+ I+R+ G
Sbjct: 301 DEVLNFRRKTYHALVVFLFL---PVCCLDPHFLHLSFSGVLFIFLFVEGIRILRLKPFG- 356
Query: 137 GMWKDEATVKSMSRYGDRRELLTGPLYYA-ITITLACVI--YWRNSPNG--------IAA 185
+ + + Y D R+ GPL + I + + C I + N+ G +
Sbjct: 357 -----KMIHEFLWEYTDNRDH-KGPLIISHIYLLIGCAIPIWLSNALKGPVASVELLVGV 410
Query: 186 ICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFL 228
+C C GD A ++G+RFGK ++ NKSI G A + + FL
Sbjct: 411 LCLGC-GDSMASIIGKRFGKHRIS-KTNKSIEGVFAFSISVFL 451
>sp|P20048|SEC59_YEAST Dolichol kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SEC59 PE=1 SV=1
Length = 519
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 147 SMSRYGDRRELLTGPL---YYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRF 203
+ R+ D R+ +GPL Y + ++ + NSP G+ L GD A ++G+R+
Sbjct: 383 QLRRFADDRDH-SGPLIISYLYLLFGISTPLLMNNSPMGLIG---LGIGDSLASIIGKRY 438
Query: 204 GKRKLPYNQNKSIAGSCAMASAGFL 228
G+ + Q K++ G+ A F+
Sbjct: 439 GRIRWKGTQ-KTLEGTLAFIVTSFI 462
>sp|Q9UU96|GRC3_SCHPO Polynucleotide 5'-hydroxyl-kinase grc3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=grc3 PE=1 SV=1
Length = 736
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 29 PPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARR 83
P +S+FS++ P SPS + L V +V S S+ A +++ EE + R
Sbjct: 103 PQEYSEFSVASPQTISPSLPLNLDDETVSENVPHSPQSSNDAIPVIKITEENSFR 157
>sp|P33015|YEEE_ECOLI UPF0394 inner membrane protein YeeE OS=Escherichia coli (strain
K12) GN=yeeE PE=1 SV=1
Length = 352
Score = 31.2 bits (69), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 85 LFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVG 135
LF+++ + + + IGLI +L WPL + R L +P NI++ L+ G
Sbjct: 193 LFEKRWHPFVTAVLIGLIALLAWPLSEATGRMFGLGITSPTANILQFLVAG 243
>sp|Q86XE5|HOGA1_HUMAN Probable 4-hydroxy-2-oxoglutarate aldolase, mitochondrial OS=Homo
sapiens GN=HOGA1 PE=1 SV=1
Length = 327
Score = 30.8 bits (68), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 107 WPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVK---SMSRYGDRRELLTGPLY 163
+P +S R +++ + + R+LL GSG +ATV+ SM++ G ++ P Y
Sbjct: 81 FPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCY 140
Query: 164 YAITITLACVIY 175
Y ++ A +I+
Sbjct: 141 YRGRMSSAALIH 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,177,496
Number of Sequences: 539616
Number of extensions: 3468766
Number of successful extensions: 7177
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7163
Number of HSP's gapped (non-prelim): 21
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)