Query 025316
Match_columns 254
No_of_seqs 161 out of 487
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 07:53:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025316.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025316hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tzt_A Glycosyl transferase fa 100.0 2E-40 6.7E-45 296.5 9.2 224 17-245 3-272 (276)
2 1g9r_A Glycosyl transferase; a 100.0 6.5E-37 2.2E-41 277.4 12.1 221 20-245 1-271 (311)
3 1ll2_A Glycogenin-1; protein-s 99.9 2.3E-27 7.9E-32 217.2 11.3 206 18-245 3-257 (333)
4 3u2u_A Glycogenin-1, GN-1, GN1 99.9 5.8E-26 2E-30 201.7 8.3 202 21-244 7-257 (263)
5 2p6w_A VP54, putative glycosyl 22.3 79 0.0027 26.2 3.8 16 89-104 71-86 (213)
6 3o6q_A Stage II sporulation pr 19.0 33 0.0011 27.1 0.8 39 17-55 35-73 (157)
7 2ffu_A Ppgalnact-2, polypeptid 19.0 2.9E+02 0.01 24.9 7.5 91 18-113 66-170 (501)
8 2fy7_A Beta-1,4-galactosyltran 17.4 4.6E+02 0.016 22.1 9.1 77 17-107 64-146 (287)
9 1xv5_A AGT, DNA alpha-glucosyl 16.9 33 0.0011 29.3 0.4 74 19-107 3-84 (401)
10 2d7i_A Polypeptide N-acetylgal 16.6 3.6E+02 0.012 25.1 7.6 92 18-113 112-220 (570)
No 1
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=100.00 E-value=2e-40 Score=296.49 Aligned_cols=224 Identities=15% Similarity=0.140 Sum_probs=151.9
Q ss_pred CceeEEEEEecCCchhhhHHHHHHHhHhCC-CCeEEEEeeccc-------ccc----cC--ceeecc---------CCCC
Q 025316 17 NKPFKIFVGYDPREDLAYRVCHRSILKRSS-IPVKITPIVQSD-------LRK----SG--LYWRER---------GQTE 73 (254)
Q Consensus 17 ~~~i~I~~g~D~~~~~~~~v~i~SI~~~~~-~~v~i~~i~~~~-------l~~----~~--~~~~~~---------~~~~ 73 (254)
.++|||++++|.+|+.+++|++.||++|++ .++.|+++...- ++. .+ +..... ...+
T Consensus 3 ~m~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 82 (276)
T 3tzt_A 3 AMADALLLTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSFAKVTDR 82 (276)
T ss_dssp --CEEEEEECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC------------
T ss_pred ceeEEEEEEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhcCccccc
Confidence 367999999999999999999999999997 589999996421 110 01 100000 0113
Q ss_pred CCcceeehhehhhhcC-CCCeEEEEeCCEEEecChHHHHccCCCCceeEEEeccCCcc--ccccccCC-ccCCCCCccee
Q 025316 74 STEFSFSRFLTPYLAG-FDGWAVFVDCDFLYLADIKELCDLIDDKYAIMCVHHDYTPK--ETTKMDGA-VQTVYPRKNWS 149 (254)
Q Consensus 74 ~t~~ty~R~~ip~l~~-~~~k~LYLD~DiIv~~dl~eL~~~dl~~~~vaaV~d~~~~~--~~~~~~g~-~~~~Y~~fN~s 149 (254)
.+..+|+||++|+++| ..+|+||||||+||++||+|||++|++++.+|||+|..... ...+..+. ... .||| |
T Consensus 83 ~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~--~yfN-s 159 (276)
T 3tzt_A 83 YPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDT--DYYN-S 159 (276)
T ss_dssp -CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC----------------------CEE-E
T ss_pred cCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCC--CeEE-e
Confidence 4568999999999998 57999999999999999999999999999999998632111 11111121 112 4499 9
Q ss_pred eEEEEeCCccccccccHHHHHhccccccccccccc--------CCcccccCC-CcccccCCCcc----cCC-----CCCC
Q 025316 150 SMVLYNCGHPKNKILTPEVVNTQTGAFLHRFQWLE--------DEEIGSIPF-VWNFLEGHNMV----VEN-----DPTT 211 (254)
Q Consensus 150 GVmLiNl~~~~~~~l~~~~~~~~~~~~~~~f~~~~--------~~~i~~L~~-~wN~~~~~~~~----~~~-----~~~~ 211 (254)
||||||+++||..++++++.+..... ...+.+.| ++++..||. +||++.++... ... ...+
T Consensus 160 GV~linl~~~R~~~~~~~~~~~~~~~-~~~~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~~~~~~~~~~~~~~~~ 238 (276)
T 3tzt_A 160 GLLLINLKRAREEIDPDEIFSFVEDN-HMNLLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSYLIRSKKQADLAWLMD 238 (276)
T ss_dssp EEEEEEHHHHHHHCCHHHHHHHHHHC---------CHHHHHHHGGGEEEEEHHHHSEETTCHHHHHHHTTTCCSHHHHHH
T ss_pred eEEEEEHHHHHhhhHHHHHHHHHHhc-cccccCCChhHHHHHHhCCEEECCchheeeecccchhhhccccchhhhhhhcc
Confidence 99999988877667777665432211 01112233 346789998 99999875421 000 1234
Q ss_pred CCeEEEeCC-CCCCcCCCCCCccHHhHHHHHHHHH
Q 025316 212 FPKAIHYTR-GGPWFEAWKHCEFADLWLKEMEEYK 245 (254)
Q Consensus 212 ~p~IIHyt~-~KPW~~~~~~~p~~~~w~~y~~~~~ 245 (254)
+|+||||+| .|||+.. +.++|+++||+|++.+.
T Consensus 239 ~~~iiHy~g~~KPW~~~-~~~~~~~~w~~Y~~~~~ 272 (276)
T 3tzt_A 239 HTVVLHFCGRDKPWKKN-HRNKFTSLYKHYMSLTK 272 (276)
T ss_dssp HCCEEECCSSCCTTSTT-CCSTTHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCcCCC-CCCchHHHHHHHHHHHH
Confidence 799999999 9999964 58999999999988654
No 2
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=100.00 E-value=6.5e-37 Score=277.41 Aligned_cols=221 Identities=10% Similarity=0.067 Sum_probs=152.8
Q ss_pred eEEEEEecCCchhhhHHHHHHH-hHhCCCCeEEEEeecc-------cccc------cCceeec---------c-CCCCCC
Q 025316 20 FKIFVGYDPREDLAYRVCHRSI-LKRSSIPVKITPIVQS-------DLRK------SGLYWRE---------R-GQTEST 75 (254)
Q Consensus 20 i~I~~g~D~~~~~~~~v~i~SI-~~~~~~~v~i~~i~~~-------~l~~------~~~~~~~---------~-~~~~~t 75 (254)
+||++++|.+|+.++.|++.|| ++|++.++.|+++... .++. ..+.... . .....+
T Consensus 1 m~I~~~~d~~Y~~~~~vli~Sl~l~~~~~~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~s 80 (311)
T 1g9r_A 1 MDIVFAADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLNIRHIS 80 (311)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHTCTTSCCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEECCGGGGTTSCCCCTTCC
T ss_pred CeEEEECCHhHHHHHHHHHHHHHHHcCCCCceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEcCHHHHhcCccccccCC
Confidence 6899999999999999999999 8898889999998642 0110 0011100 0 012346
Q ss_pred cceeehhehhhhcCCCCeEEEEeCCEEEecChHHHHccCCCCceeEEEeccCCc--cccccccCCccCCCCCcceeeEEE
Q 025316 76 EFSFSRFLTPYLAGFDGWAVFVDCDFLYLADIKELCDLIDDKYAIMCVHHDYTP--KETTKMDGAVQTVYPRKNWSSMVL 153 (254)
Q Consensus 76 ~~ty~R~~ip~l~~~~~k~LYLD~DiIv~~dl~eL~~~dl~~~~vaaV~d~~~~--~~~~~~~g~~~~~Y~~fN~sGVmL 153 (254)
.++|+||++|++++..+|+|||||||||++||+|||++|++++.+|||+|.... ....+..|.... .++|| |||||
T Consensus 81 ~~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~-~~yfN-sGv~l 158 (311)
T 1g9r_A 81 ITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADG-EYYFN-AGVLL 158 (311)
T ss_dssp GGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTT-SCCEE-EEEEE
T ss_pred HHHHHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCC-CceEe-eeeee
Confidence 789999999999988899999999999999999999999999999999863211 111223443211 23499 99999
Q ss_pred EeCCccccccccHHHHHhccccccccccccc--------CCcccccCCCcccccCCCcc-------c--------CCCCC
Q 025316 154 YNCGHPKNKILTPEVVNTQTGAFLHRFQWLE--------DEEIGSIPFVWNFLEGHNMV-------V--------ENDPT 210 (254)
Q Consensus 154 iNl~~~~~~~l~~~~~~~~~~~~~~~f~~~~--------~~~i~~L~~~wN~~~~~~~~-------~--------~~~~~ 210 (254)
||+++||..++++++++..... ...+.+.| .+++..||.+||++.+.... . .....
T Consensus 159 inl~~~r~~~~~~~~~~~~~~~-~~~~~~~DQd~lN~~f~~~~~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 1g9r_A 159 INLKKWRRHDIFKMSSEWVEQY-KDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTV 237 (311)
T ss_dssp ECHHHHTTSCHHHHHHHHHHHH-TTTCSSHHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC----CSCCCHHHHHHHSCC
T ss_pred eeHHHHHhcchHHHHHHHHHhc-cCcCccCCcCHHHHHHcCCEEEcChhhccCcchhhHHhhhcccccchhhhhHHhhcc
Confidence 9988877667777665532211 11122333 35688999999998643210 0 01133
Q ss_pred CCCeEEEeCC-CCCCcCCCCCCccHHhHHHHHHHHH
Q 025316 211 TFPKAIHYTR-GGPWFEAWKHCEFADLWLKEMEEYK 245 (254)
Q Consensus 211 ~~p~IIHyt~-~KPW~~~~~~~p~~~~w~~y~~~~~ 245 (254)
++|+||||+| .|||+.. +.+|.++.| +|+.+.+
T Consensus 238 ~~~~iiHy~g~~KPW~~~-~~~~~~~~~-~~~~~~~ 271 (311)
T 1g9r_A 238 MPVAVSHYCGPAKPWHRD-CTAWGAERF-TELAGSL 271 (311)
T ss_dssp SSCSEEECCSSCCTTSSS-CCSTTTHHH-HHHHHTC
T ss_pred CCCEEEEeCCcCCCCCCC-CCCccHHHH-HHHHHhh
Confidence 4789999999 8999964 578887555 4444333
No 3
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=99.94 E-value=2.3e-27 Score=217.18 Aligned_cols=206 Identities=14% Similarity=0.163 Sum_probs=132.8
Q ss_pred ceeEEEEEecCCchhhhHHHHHHHhHhCCCCeEEEEeeccccc--------ccCceeeccC----C---------CCCCc
Q 025316 18 KPFKIFVGYDPREDLAYRVCHRSILKRSSIPVKITPIVQSDLR--------KSGLYWRERG----Q---------TESTE 76 (254)
Q Consensus 18 ~~i~I~~g~D~~~~~~~~v~i~SI~~~~~~~v~i~~i~~~~l~--------~~~~~~~~~~----~---------~~~t~ 76 (254)
+...|++++|.+|+.++.|+++||+++++ ...++++...+++ ..+...+... . .+...
T Consensus 3 ~~a~vt~~~d~~Yl~~a~vl~~SL~~~~s-~~~l~vlv~~~is~~~~~~L~~~~~~v~~v~~l~~~~~~~~~~~~~~~~~ 81 (333)
T 1ll2_A 3 DQAFVTLTTNDAYAKGALVLGSSLKQHRT-SRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPELG 81 (333)
T ss_dssp SEEEEEEESSHHHHHHHHHHHHHHHHTTC-CSEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGGGH
T ss_pred ceEEEEEEeCHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCCHHHHHHHHHhCCEEEEEeecCCcchhhcccccccchH
Confidence 45789999999999999999999999975 3455544432221 1100000000 0 01134
Q ss_pred ceeehhehhhhcCCCCeEEEEeCCEEEecChHHHHccCCCCceeEEEeccCCccccccccCCccCCCCCcceeeEEEEeC
Q 025316 77 FSFSRFLTPYLAGFDGWAVFVDCDFLYLADIKELCDLIDDKYAIMCVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNC 156 (254)
Q Consensus 77 ~ty~R~~ip~l~~~~~k~LYLD~DiIv~~dl~eL~~~dl~~~~vaaV~d~~~~~~~~~~~g~~~~~Y~~fN~sGVmLiNl 156 (254)
.+|+||++|.| ...+||||||||+||++||+|||+++ .+|||.|. |. +. +|| |||||||+
T Consensus 82 ~t~~Kl~i~~l-~~ydrvlYLDaD~lv~~di~eLf~~~----~~aAv~d~----------~~--~~--~fN-sGvmlin~ 141 (333)
T 1ll2_A 82 VTLTKLHCWSL-TQYSKCVFMDADTLVLANIDDLFERE----ELSAAPDP----------GW--PD--CFN-SGVFVYQP 141 (333)
T ss_dssp HHHHHGGGGGC-TTCSEEEEECTTEEECSCCGGGGGSC----SSEEEECS----------SS--TT--SEE-EEEEEECC
T ss_pred HHHHHHHHhHh-cCCCeEEEEeCCEEeccCHHHHhCCC----ceeEEecC----------CC--Cc--cee-eeEEEEeC
Confidence 78999999997 45799999999999999999999997 47778742 21 12 499 99999998
Q ss_pred CccccccccHHHHHh------ccccccccc-ccccCCcccccCCCcccccCCCcc-c--CCCCCCCCeEEEeCC-CCCCc
Q 025316 157 GHPKNKILTPEVVNT------QTGAFLHRF-QWLEDEEIGSIPFVWNFLEGHNMV-V--ENDPTTFPKAIHYTR-GGPWF 225 (254)
Q Consensus 157 ~~~~~~~l~~~~~~~------~~~~~~~~f-~~~~~~~i~~L~~~wN~~~~~~~~-~--~~~~~~~p~IIHyt~-~KPW~ 225 (254)
+...|+++.+..... .++..+.-| .|...+.+..||.+||++.+.... . .....++|+||||+| .|||+
T Consensus 142 ~~~~~~~l~~~~~~~~~~~~~DQ~~LN~~f~~~~~~~~~~~Lp~~yN~~~~~~~~~~p~~~~~~~~~~IiHf~g~~KPW~ 221 (333)
T 1ll2_A 142 SVETYNQLLHVASEQGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGANAKVVHFLGQTKPWN 221 (333)
T ss_dssp CHHHHHHHHHHHHHTCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTHHHHTHHHHHHHGGGCSEEECCSSCCGGG
T ss_pred CHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHhhcccCccccCCcHHhcccccchhccHHHHhhcCCCEEEEECCCCCCCC
Confidence 766665543322211 011111112 222223337899999998653110 0 001134799999999 99999
Q ss_pred CCCCCC-----------------ccHHhHHHHHHHHH
Q 025316 226 EAWKHC-----------------EFADLWLKEMEEYK 245 (254)
Q Consensus 226 ~~~~~~-----------------p~~~~w~~y~~~~~ 245 (254)
..+ +| ++.+.||.+..+..
T Consensus 222 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~WW~~~~~~~ 257 (333)
T 1ll2_A 222 YTY-DTKTKSVRSEGHDPTMTHPQFLNVWWDIFTTSV 257 (333)
T ss_dssp SCE-ETTTTEEC--------CCHHHHHHHHHHHHHTH
T ss_pred CCC-CCCccccccccccccccHHHHHHHHHHHHHhhc
Confidence 654 22 56789999987554
No 4
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=99.92 E-value=5.8e-26 Score=201.70 Aligned_cols=202 Identities=16% Similarity=0.187 Sum_probs=128.8
Q ss_pred EEEEEecCCchhhhHHHHHHHhHhCCCCeEEEEeeccccc--------ccCceeecc---C----------CCCCCccee
Q 025316 21 KIFVGYDPREDLAYRVCHRSILKRSSIPVKITPIVQSDLR--------KSGLYWRER---G----------QTESTEFSF 79 (254)
Q Consensus 21 ~I~~g~D~~~~~~~~v~i~SI~~~~~~~v~i~~i~~~~l~--------~~~~~~~~~---~----------~~~~t~~ty 79 (254)
=|.+.+|.+|+.++.|+++||+++++ ...++++...+++ ..+...+.. . ..+.-..+|
T Consensus 7 yvTl~td~~Yl~ga~vL~~SL~~~~s-~~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~~~~~~ 85 (263)
T 3u2u_A 7 FVTLTTNDAYAKGALVLGSSLKQHRT-TRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPELGVTL 85 (263)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTTC-CSEEEEEECTTSCHHHHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTTGGGGG
T ss_pred EEEEEECHHHHHHHHHHHHHHHHhCC-CCCEEEEecCCCCHHHHHHHHHcCCeEEEeeecCCcchhhhhhhcCcchhHHh
Confidence 35577999999999999999999876 4556555433222 100000000 0 111124689
Q ss_pred ehhehhhhcCCCCeEEEEeCCEEEecChHHHHccCCCCceeEEEeccCCccccccccCCccCCCCCcceeeEEEEeCCcc
Q 025316 80 SRFLTPYLAGFDGWAVFVDCDFLYLADIKELCDLIDDKYAIMCVHHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHP 159 (254)
Q Consensus 80 ~R~~ip~l~~~~~k~LYLD~DiIv~~dl~eL~~~dl~~~~vaaV~d~~~~~~~~~~~g~~~~~Y~~fN~sGVmLiNl~~~ 159 (254)
.|+.++.+.+ .+|+||||||++|+++|+|||+++ .+|||.|. |. +.| || |||||||.+..
T Consensus 86 ~kl~~~~l~~-~~~vlylD~D~~v~~~~~~Lf~~~----~~aA~~d~----------~~--~~~--fN-sGv~li~p~~~ 145 (263)
T 3u2u_A 86 TKLHCWSLTQ-YSKCVFMDADTLVLANIDDLFDRE----ELSAAPDP----------GW--PDC--FN-SGVFVYQPSVE 145 (263)
T ss_dssp GGGGGGGCTT-CSEEEEECTTEEECSCCGGGGGSC----SSEEEECT----------TS--TTS--EE-EEEEEECCCHH
T ss_pred HHHHhccccC-cceEEEEcCCEeeccCHHHHhCCC----cceEeccC----------CC--Ccc--cc-CeEEEEcccHH
Confidence 9999999876 689999999999999999999997 46777752 11 234 99 99999997654
Q ss_pred ccccccHHHHHh------cccccccc-c-ccccCCcccccCCCcccccCCCcc-c--CCCCCCCCeEEEeCC-CCCCcCC
Q 025316 160 KNKILTPEVVNT------QTGAFLHR-F-QWLEDEEIGSIPFVWNFLEGHNMV-V--ENDPTTFPKAIHYTR-GGPWFEA 227 (254)
Q Consensus 160 ~~~~l~~~~~~~------~~~~~~~~-f-~~~~~~~i~~L~~~wN~~~~~~~~-~--~~~~~~~p~IIHyt~-~KPW~~~ 227 (254)
.++++-+..... .++. ++. | +|...+.+..||.+||++.+.... . +....++|+||||+| .|||+..
T Consensus 146 ~~~~l~~~~~~~~~~~~~DQd~-LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~~~~~~~~~~~~~IIHf~g~~KPW~~~ 224 (263)
T 3u2u_A 146 TYNQLLHLASEQGSFDGGDQGI-LNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFKVFGASAKVVHFLGRVKPWNYT 224 (263)
T ss_dssp HHHHHHHHHHHHCCTTSSHHHH-HHHHTTTTTTSCGGGBCCGGGSEEHHHHHSSHHHHHHHGGGCSEEECCSSSCGGGSE
T ss_pred HHHHHHHHHHhcCCCCcccHHH-HHHHhccccccCeeEeCCcccccccchhccccHHHHhhcCCeEEEEECCCCcCCCCC
Confidence 333322211111 0111 111 2 233334678999999998642110 0 001234799999999 9999964
Q ss_pred CCC----------------CccHHhHHHHHHHH
Q 025316 228 WKH----------------CEFADLWLKEMEEY 244 (254)
Q Consensus 228 ~~~----------------~p~~~~w~~y~~~~ 244 (254)
+.. ..+-+.||....+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~ww~~~~~~ 257 (263)
T 3u2u_A 225 YDPKTKSVKSEAHDPNMTHPEFLILWWNIFTTN 257 (263)
T ss_dssp EETTTTEEECCSSCGGGSSTHHHHHHHHHHHHH
T ss_pred CCCCCCcccccCCCcchhHHHHHHHHHHHHHhh
Confidence 320 25668999876653
No 5
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=22.34 E-value=79 Score=26.24 Aligned_cols=16 Identities=19% Similarity=0.405 Sum_probs=15.1
Q ss_pred CCCCeEEEEeCCEEEe
Q 025316 89 GFDGWAVFVDCDFLYL 104 (254)
Q Consensus 89 ~~~~k~LYLD~DiIv~ 104 (254)
|..+.+-|||+|.++.
T Consensus 71 PeAEWfWWLDsDAlIM 86 (213)
T 2p6w_A 71 PSTEWFLWLDSDVYVN 86 (213)
T ss_dssp TTCSEEEEECTTEEEC
T ss_pred CCceEEEEecCCceee
Confidence 7789999999999998
No 6
>3o6q_A Stage II sporulation protein SA; GAF domain, toxin-antitoxin, toxin - antitoxin toxin-antitoxin complex; HET: MSE; 2.50A {Bacillus subtilis}
Probab=19.02 E-value=33 Score=27.08 Aligned_cols=39 Identities=8% Similarity=0.148 Sum_probs=32.7
Q ss_pred CceeEEEEEecCCchhhhHHHHHHHhHhCCCCeEEEEee
Q 025316 17 NKPFKIFVGYDPREDLAYRVCHRSILKRSSIPVKITPIV 55 (254)
Q Consensus 17 ~~~i~I~~g~D~~~~~~~~v~i~SI~~~~~~~v~i~~i~ 55 (254)
+.+|++++|.++.|+.|..-+++|--+.+...+.+.+..
T Consensus 35 ne~I~vyygs~eaY~~Gi~~lL~~yaeK~~i~asl~~fs 73 (157)
T 3o6q_A 35 NEPIHVYYGSIDAYAEGIDKLLKTYADKMNLTASLCHYS 73 (157)
T ss_dssp HSCEEEEESSHHHHHHHHHHHHHHHHHTTTSEEEEEECS
T ss_pred CCceEEEeccHHHHHHHHHHHHHHHHHhcCceeeeccCC
Confidence 578999999999999999999999888776666666554
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=19.00 E-value=2.9e+02 Score=24.93 Aligned_cols=91 Identities=15% Similarity=0.066 Sum_probs=49.8
Q ss_pred ceeEEEEEecCCchhhhHHHHHHHhHhCCCC--eEEEEeeccc-c----------cccCceeeccCCCCCCcceeehheh
Q 025316 18 KPFKIFVGYDPREDLAYRVCHRSILKRSSIP--VKITPIVQSD-L----------RKSGLYWRERGQTESTEFSFSRFLT 84 (254)
Q Consensus 18 ~~i~I~~g~D~~~~~~~~v~i~SI~~~~~~~--v~i~~i~~~~-l----------~~~~~~~~~~~~~~~t~~ty~R~~i 84 (254)
..+-|+|.+=....-...-++.||+..+..+ .++.+++... - +...+.....+ ...+.+|-.-
T Consensus 66 p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~~v~vi~~~~n----~G~~~A~N~G 141 (501)
T 2ffu_A 66 PATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRR----EGLMRSRVRG 141 (501)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGBTTEEEEECSSC----CHHHHHHHHH
T ss_pred CCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcCCCEEEEECCCC----cCHHHHHHHH
Confidence 4588887754332226777899999987655 4888887421 1 00001100110 1122223222
Q ss_pred hhhcCCCCeEEEEeCCEEEec-ChHHHHcc
Q 025316 85 PYLAGFDGWAVFVDCDFLYLA-DIKELCDL 113 (254)
Q Consensus 85 p~l~~~~~k~LYLD~DiIv~~-dl~eL~~~ 113 (254)
-... ..+-+++||+|.++.. -|.+|.+.
T Consensus 142 ~~~A-~gd~i~flD~D~~~~p~~L~~ll~~ 170 (501)
T 2ffu_A 142 ADAA-QAKVLTFLDSHCECNEHWLEPLLER 170 (501)
T ss_dssp HHHC-CSSEEEECCSSEEECTTCHHHHHHH
T ss_pred HHhc-CCCEEEEECCCcccCccHHHHHHHH
Confidence 2222 3589999999999954 46666554
No 8
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=17.44 E-value=4.6e+02 Score=22.12 Aligned_cols=77 Identities=13% Similarity=-0.016 Sum_probs=46.4
Q ss_pred CceeEEEEEecCCchhhhHHHHHHHh---HhCCCCeEEEEeecccccccCceeeccCCCCCCcceeeh-hehhh--hcCC
Q 025316 17 NKPFKIFVGYDPREDLAYRVCHRSIL---KRSSIPVKITPIVQSDLRKSGLYWRERGQTESTEFSFSR-FLTPY--LAGF 90 (254)
Q Consensus 17 ~~~i~I~~g~D~~~~~~~~v~i~SI~---~~~~~~v~i~~i~~~~l~~~~~~~~~~~~~~~t~~ty~R-~~ip~--l~~~ 90 (254)
...|-|+|-+ .|.......++.|+. .....+.++.+++.+.-.. ...+ -.| .-+-+ -...
T Consensus 64 ~~~VSIIIP~-yN~~~~L~~~L~sl~~~l~q~~~~~EIiVVdds~d~~------------f~~a-~a~N~G~~~al~~A~ 129 (287)
T 2fy7_A 64 PHKVAIIIPF-RNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTI------------FNRA-KLLNVGFQEALKDYD 129 (287)
T ss_dssp SCEEEEEEEE-SSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSSC------------CCHH-HHHHHHHHHHHHHSC
T ss_pred CCcEEEEEee-CCCHHHHHHHHHHHHHHHHHhcCCceEEEEEeCCCCc------------cchh-hhhhhHHHHHHHhCC
Confidence 3458888775 455667888899998 5566678888887531100 0000 000 00100 0123
Q ss_pred CCeEEEEeCCEEEecCh
Q 025316 91 DGWAVFVDCDFLYLADI 107 (254)
Q Consensus 91 ~~k~LYLD~DiIv~~dl 107 (254)
.+-+++||+|+++..+-
T Consensus 130 gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 130 YTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp CCEEEEECTTEEESBTT
T ss_pred CCEEEEECCCcccCCCc
Confidence 57899999999998883
No 9
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=16.93 E-value=33 Score=29.27 Aligned_cols=74 Identities=19% Similarity=0.268 Sum_probs=43.8
Q ss_pred eeEEEEEecCCchhhhHHHHHHHhHhC-----CCCeEEEEeecccccccCceeeccCCCCCCcceeehhehhhhcC-CCC
Q 025316 19 PFKIFVGYDPREDLAYRVCHRSILKRS-----SIPVKITPIVQSDLRKSGLYWRERGQTESTEFSFSRFLTPYLAG-FDG 92 (254)
Q Consensus 19 ~i~I~~g~D~~~~~~~~v~i~SI~~~~-----~~~v~i~~i~~~~l~~~~~~~~~~~~~~~t~~ty~R~~ip~l~~-~~~ 92 (254)
.|-||.+ +-+.+++|+-.|+.+.. ...+++..-.++.+...+ .-.---|-||-++. ..+
T Consensus 3 ricifma---rglegcgvtkfsleqrdwfiknghevtlvyakdksftrts------------shdhksfsipvilakeyd 67 (401)
T 1xv5_A 3 RICIFMA---RGLEGCGVTKFSLEQRDWFIKNGHEVTLVYAKDKSFTRTS------------SHDHKSFSIPVILAKEYD 67 (401)
T ss_dssp EEEEEET---TCCCSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTTT------------SSSCTTTCEEECTTTCHH
T ss_pred eEEEEee---ccccccCceeeehhhhhhhhcCCcEEEEEEeccccccccc------------cccCccccceeEehhhhH
Confidence 3445555 67889999999998753 344554444443332110 01112356786663 457
Q ss_pred eEEEE--eCCEEEecCh
Q 025316 93 WAVFV--DCDFLYLADI 107 (254)
Q Consensus 93 k~LYL--D~DiIv~~dl 107 (254)
|+|=| |||+++..++
T Consensus 68 kalklvndcdiliinsv 84 (401)
T 1xv5_A 68 KALKLVNDCDILIINSV 84 (401)
T ss_dssp HHHHHHTSCSEEEEEEC
T ss_pred HHhhhhccCcEEEEccC
Confidence 87655 9999987654
No 10
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=16.58 E-value=3.6e+02 Score=25.09 Aligned_cols=92 Identities=15% Similarity=0.114 Sum_probs=51.2
Q ss_pred ceeEEEEEecCCchhhhHHHHHHHhHhCCCCe--EEEEeeccc-ccc-c-----------Cc-eeeccCCCCCCcceeeh
Q 025316 18 KPFKIFVGYDPREDLAYRVCHRSILKRSSIPV--KITPIVQSD-LRK-S-----------GL-YWRERGQTESTEFSFSR 81 (254)
Q Consensus 18 ~~i~I~~g~D~~~~~~~~v~i~SI~~~~~~~v--~i~~i~~~~-l~~-~-----------~~-~~~~~~~~~~t~~ty~R 81 (254)
..+-|+|.+=...+....-++.||+..+..+. +|.+++... -+. . .+ +.+...+ ...+-.|
T Consensus 112 P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n---~G~~~A~ 188 (570)
T 2d7i_A 112 PNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKR---EGLIRTR 188 (570)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSC---CCHHHHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCC---CCHHHHH
Confidence 45888887644444667888999999886554 888887421 110 0 00 0010000 1122223
Q ss_pred hehhhhcCCCCeEEEEeCCEEEec-ChHHHHcc
Q 025316 82 FLTPYLAGFDGWAVFVDCDFLYLA-DIKELCDL 113 (254)
Q Consensus 82 ~~ip~l~~~~~k~LYLD~DiIv~~-dl~eL~~~ 113 (254)
-.--... ..+-+++||+|+++.. -|++|.+.
T Consensus 189 N~G~~~A-~gd~i~fLD~D~~~~p~~L~~ll~~ 220 (570)
T 2d7i_A 189 MLGASVA-TGDVITFLDSHCEANVNWLPPLLDR 220 (570)
T ss_dssp HHHHHHC-CSSEEEECCSSEEECTTCSHHHHHH
T ss_pred HHHHHhc-CCCEEEEEcCCccccccHHHHHHHH
Confidence 2222222 3589999999999954 45556554
Done!