Query 025317
Match_columns 254
No_of_seqs 261 out of 1707
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 07:53:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025317.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025317hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yat_A FK506 binding protein; 99.9 1.2E-26 4.1E-31 178.2 14.2 109 130-238 3-113 (113)
2 2y78_A Peptidyl-prolyl CIS-tra 99.9 1.5E-26 5.1E-31 182.9 14.2 111 127-237 22-133 (133)
3 4dip_A Peptidyl-prolyl CIS-tra 99.9 2.4E-26 8.2E-31 179.6 14.1 114 127-240 6-124 (125)
4 3o5q_A Peptidyl-prolyl CIS-tra 99.9 2.7E-26 9.2E-31 180.2 13.9 110 130-239 16-127 (128)
5 1jvw_A Macrophage infectivity 99.9 7.7E-27 2.6E-31 191.2 11.2 114 126-241 30-145 (167)
6 3o5e_A Peptidyl-prolyl CIS-tra 99.9 3.8E-26 1.3E-30 182.9 14.5 109 131-239 33-143 (144)
7 2ppn_A FK506-binding protein 1 99.9 3.4E-26 1.2E-30 173.8 13.3 105 134-238 1-107 (107)
8 2lgo_A FKBP; infectious diseas 99.9 3.1E-26 1.1E-30 180.4 13.2 111 127-237 16-130 (130)
9 3kz7_A FK506-binding protein 3 99.9 5.1E-26 1.7E-30 176.1 13.9 108 131-238 2-119 (119)
10 3oe2_A Peptidyl-prolyl CIS-tra 99.9 2.4E-26 8E-31 195.4 11.7 117 118-239 102-219 (219)
11 2lkn_A AH receptor-interacting 99.9 1E-26 3.5E-31 189.6 8.2 113 130-242 7-161 (165)
12 1fd9_A Protein (macrophage inf 99.9 4.4E-26 1.5E-30 193.5 12.2 116 122-239 95-211 (213)
13 1u79_A FKBP-type peptidyl-prol 99.9 4.6E-26 1.6E-30 179.1 10.9 111 127-237 6-128 (129)
14 3b7x_A FK506-binding protein 6 99.9 2.9E-26 1E-30 181.4 9.6 110 130-239 23-134 (134)
15 2vn1_A 70 kDa peptidylprolyl i 99.9 2.1E-25 7.2E-30 175.2 14.4 114 127-240 9-128 (129)
16 1r9h_A FKB-6, FK506 binding pr 99.9 2E-25 6.8E-30 176.8 13.6 110 131-240 12-123 (135)
17 3uf8_A Ubiquitin-like protein 99.9 1.9E-25 6.4E-30 189.3 14.3 110 128-237 99-209 (209)
18 2f4e_A ATFKBP42; FKBP-like, al 99.9 2.6E-25 9E-30 184.3 14.8 116 127-242 43-163 (180)
19 2jwx_A FKBP38NTD, FK506-bindin 99.9 2.5E-25 8.4E-30 180.5 14.2 110 130-243 39-153 (157)
20 1q6h_A FKBP-type peptidyl-prol 99.9 2E-25 6.9E-30 190.7 12.5 117 120-238 108-224 (224)
21 2awg_A 38 kDa FK-506 binding p 99.9 2.3E-24 8E-29 166.7 13.6 105 131-239 10-118 (118)
22 2d9f_A FK506-binding protein 8 99.9 2E-24 7E-29 171.0 10.9 115 130-248 13-132 (135)
23 2pbc_A FK506-binding protein 2 99.9 2.2E-23 7.6E-28 156.9 11.0 97 145-241 3-100 (102)
24 1q1c_A FK506-binding protein 4 99.9 1.8E-22 6.3E-27 178.1 15.9 110 131-240 49-160 (280)
25 3jxv_A 70 kDa peptidyl-prolyl 99.9 1.6E-21 5.4E-26 177.5 15.3 131 109-239 218-355 (356)
26 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 6.8E-22 2.3E-26 184.6 11.1 110 131-240 29-140 (457)
27 2if4_A ATFKBP42; FKBP-like, al 99.9 2.5E-21 8.6E-26 173.9 13.2 116 127-242 43-163 (338)
28 3jxv_A 70 kDa peptidyl-prolyl 99.9 4.7E-23 1.6E-27 187.6 0.7 112 130-241 8-121 (356)
29 1q1c_A FK506-binding protein 4 99.8 4.3E-20 1.5E-24 162.9 14.4 131 108-244 140-279 (280)
30 4dt4_A FKBP-type 16 kDa peptid 99.7 3.8E-18 1.3E-22 139.5 10.1 70 147-216 24-93 (169)
31 1hxv_A Trigger factor; FKBP fo 99.7 3.2E-18 1.1E-22 131.3 7.6 87 145-238 27-113 (113)
32 3pr9_A FKBP-type peptidyl-prol 99.7 2.3E-17 8E-22 133.4 9.9 69 148-217 2-83 (157)
33 2k8i_A SLYD, peptidyl-prolyl C 99.7 8.8E-17 3E-21 131.8 12.5 96 147-243 2-145 (171)
34 2kr7_A FKBP-type peptidyl-prol 99.7 1E-16 3.5E-21 128.9 11.9 70 146-216 5-75 (151)
35 2kfw_A FKBP-type peptidyl-prol 99.7 1.9E-16 6.4E-21 132.4 11.1 69 147-216 2-70 (196)
36 1ix5_A FKBP; ppiase, isomerase 99.7 5.4E-17 1.8E-21 130.6 6.9 72 147-218 1-85 (151)
37 3prb_A FKBP-type peptidyl-prol 99.7 3.1E-16 1.1E-20 134.1 11.6 94 148-242 2-153 (231)
38 1p5q_A FKBP52, FK506-binding p 99.6 6.6E-15 2.3E-19 131.7 14.5 108 129-242 21-134 (336)
39 3cgm_A SLYD, peptidyl-prolyl C 99.6 2.7E-15 9.4E-20 121.4 8.7 63 148-216 3-65 (158)
40 1w26_A Trigger factor, TF; cha 99.5 9.1E-14 3.1E-18 129.3 9.0 89 145-240 155-243 (432)
41 1t11_A Trigger factor, TF; hel 99.3 4.5E-13 1.5E-17 123.2 5.2 98 145-249 158-257 (392)
42 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 1.4E-11 4.9E-16 114.6 14.2 129 108-242 120-255 (457)
43 3gty_X Trigger factor, TF; cha 98.3 1.3E-06 4.5E-11 81.1 7.6 75 147-240 154-228 (433)
44 4edp_A ABC transporter, substr 71.1 0.84 2.9E-05 39.0 0.0 27 56-82 2-28 (351)
45 2p4v_A Transcription elongatio 65.9 36 0.0012 26.4 8.6 23 188-210 121-143 (158)
46 3bmb_A Regulator of nucleoside 59.2 54 0.0018 24.6 8.7 23 188-210 91-113 (136)
47 2f23_A Anti-cleavage anti-GREA 53.2 52 0.0018 25.3 7.5 23 188-210 122-144 (156)
48 4gd5_A Phosphate ABC transport 52.8 2.9 9.9E-05 35.2 0.0 27 56-82 3-29 (279)
49 2pn0_A Prokaryotic transcripti 52.2 35 0.0012 25.9 6.2 36 189-240 95-130 (141)
50 3ucp_A UNDA; beta-barrel, C-ty 38.1 20 0.00069 34.2 3.4 17 153-169 67-83 (874)
51 1grj_A GREA protein; transcrip 31.0 55 0.0019 25.3 4.3 23 188-210 123-145 (158)
52 3tlk_A Ferrienterobactin-bindi 22.8 18 0.00061 31.0 0.0 23 58-81 1-23 (326)
53 4hd5_A Polysaccharide deacetyl 21.7 34 0.0011 30.5 1.6 14 133-146 73-86 (360)
54 3htx_A HEN1; HEN1, small RNA m 20.8 1.2E+02 0.0042 30.3 5.5 59 147-209 560-650 (950)
55 2a3m_A COG3005: nitrate/TMAO r 20.7 21 0.00071 26.7 0.0 8 58-65 1-8 (130)
No 1
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.94 E-value=1.2e-26 Score=178.19 Aligned_cols=109 Identities=31% Similarity=0.526 Sum_probs=101.5
Q ss_pred eCCCceEEEEEeccCCCC-CCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEE
Q 025317 130 KRDSGLIYRDFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIII 208 (254)
Q Consensus 130 ~~~~Gl~y~i~~~G~G~~-~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~i 208 (254)
.+++|++|+++++|+|.. ++.||.|++||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++|+++++.|
T Consensus 3 ~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~i 82 (113)
T 1yat_A 3 VIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTI 82 (113)
T ss_dssp ECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEE
T ss_pred CCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence 367899999999999997 9999999999999999999999998767899999999999999999999999999999999
Q ss_pred CCCCCCCC-CCCCCCCCCceEEEEEEEEeee
Q 025317 209 PPELGPPV-GPSTFFSAKQFEVFDVELLSVQ 238 (254)
Q Consensus 209 P~~layG~-~~~~~ip~~s~Lvf~vel~~i~ 238 (254)
|++++||. +.+..||||++|+|+|+|++|+
T Consensus 83 p~~~ayG~~~~~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 83 PGPYAYGPRGFPGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp CGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred CHHHCcCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 99999994 4455699999999999999984
No 2
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.94 E-value=1.5e-26 Score=182.88 Aligned_cols=111 Identities=34% Similarity=0.643 Sum_probs=103.7
Q ss_pred CceeCCCceEEEEEeccCCCCCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEE
Q 025317 127 NYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRI 206 (254)
Q Consensus 127 ~~~~~~~Gl~y~i~~~G~G~~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i 206 (254)
++.++++|++|+++++|+|..++.||.|++||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++||+++|
T Consensus 22 ~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v 101 (133)
T 2y78_A 22 TVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 101 (133)
T ss_dssp CCEECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEE
T ss_pred CcEECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence 56778999999999999999999999999999999999999999987778999999999999999999999999999999
Q ss_pred EECCCCCCCCC-CCCCCCCCceEEEEEEEEee
Q 025317 207 IIPPELGPPVG-PSTFFSAKQFEVFDVELLSV 237 (254)
Q Consensus 207 ~iP~~layG~~-~~~~ip~~s~Lvf~vel~~i 237 (254)
.||++++||.. ....||||++|+|+|+|++|
T Consensus 102 ~ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 102 TIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred EECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 99999999944 44569999999999999986
No 3
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.94 E-value=2.4e-26 Score=179.59 Aligned_cols=114 Identities=25% Similarity=0.431 Sum_probs=104.8
Q ss_pred CceeCCCceEEEEEeccC--CCCCCCCCeEEEEEEEEEc-CCcEEecccc--CCCCeeEecCCCCchhHHHHHHccCCCc
Q 025317 127 NYTKRDSGLIYRDFEVGK--GDCPKDGQQVIFHYIGYNE-SGRRIDSTYL--QGSPARIRMGTNALVPGFEEGIRDMRPG 201 (254)
Q Consensus 127 ~~~~~~~Gl~y~i~~~G~--G~~~~~gd~V~v~Y~~~~~-dG~v~dst~~--~~~p~~~~lG~~~~i~Gl~~aL~~mk~G 201 (254)
+...+++|++|+++++|+ |..++.||.|++||++++. ||++|++++. .++|+.|.+|.+++++||+++|.+|++|
T Consensus 6 ~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~G 85 (125)
T 4dip_A 6 GALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVG 85 (125)
T ss_dssp GGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTT
T ss_pred ceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCC
Confidence 345578999999999998 7899999999999999998 9999999984 4689999999999999999999999999
Q ss_pred cEEEEEECCCCCCCCCCCCCCCCCceEEEEEEEEeeecC
Q 025317 202 GKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQDC 240 (254)
Q Consensus 202 e~~~i~iP~~layG~~~~~~ip~~s~Lvf~vel~~i~~~ 240 (254)
++++|+||+++|||......||||++|+|+|+|++|++.
T Consensus 86 e~~~~~ip~~~aYG~~g~~~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 86 EKRKLIIPPALGYGKEGKGKIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp CEEEEEECGGGTTTTTCBTTBCTTCCEEEEEEEEEEECC
T ss_pred CEEEEEEChHHhcCCCCCCCCCCCCeEEEEEEEEEEEcC
Confidence 999999999999996555689999999999999999864
No 4
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.94 E-value=2.7e-26 Score=180.17 Aligned_cols=110 Identities=25% Similarity=0.468 Sum_probs=103.0
Q ss_pred eCCCceEEEEEeccCCC-CCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEE
Q 025317 130 KRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIII 208 (254)
Q Consensus 130 ~~~~Gl~y~i~~~G~G~-~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~i 208 (254)
+.++|++|+++++|+|. .|+.||.|++||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++|++++|+|
T Consensus 16 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i 95 (128)
T 3o5q_A 16 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC 95 (128)
T ss_dssp SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEE
T ss_pred cCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEEE
Confidence 36799999999999997 68999999999999999999999998878899999999999999999999999999999999
Q ss_pred CCCCCCC-CCCCCCCCCCceEEEEEEEEeeec
Q 025317 209 PPELGPP-VGPSTFFSAKQFEVFDVELLSVQD 239 (254)
Q Consensus 209 P~~layG-~~~~~~ip~~s~Lvf~vel~~i~~ 239 (254)
|+++||| .+....||||++|+|+|+|++|+.
T Consensus 96 p~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 96 KPEYAYGSAGSLPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp CGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred ChHHcCCCCCCCCCcCCCCEEEEEEEEEEecC
Confidence 9999999 455568999999999999999974
No 5
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.94 E-value=7.7e-27 Score=191.20 Aligned_cols=114 Identities=31% Similarity=0.508 Sum_probs=105.0
Q ss_pred cCceeCCCceEEEEEeccCCCC-CCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEE
Q 025317 126 ENYTKRDSGLIYRDFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKR 204 (254)
Q Consensus 126 ~~~~~~~~Gl~y~i~~~G~G~~-~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~ 204 (254)
+++.++++|++|+++++|+|.. ++.||.|+|||++++.||++|++++..+.|+.|.+ +++|+||+++|.+|++|+++
T Consensus 30 ~~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~ 107 (167)
T 1jvw_A 30 PDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRP--NEVIKGWTEALQLMREGDRW 107 (167)
T ss_dssp TTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECG--GGSCHHHHHHHTTCCTTCEE
T ss_pred CCcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEe--CchhHHHHHHHcCCCCCCEE
Confidence 3677889999999999999998 99999999999999889999999987778999999 58999999999999999999
Q ss_pred EEEECCCCCCCC-CCCCCCCCCceEEEEEEEEeeecCC
Q 025317 205 RIIIPPELGPPV-GPSTFFSAKQFEVFDVELLSVQDCQ 241 (254)
Q Consensus 205 ~i~iP~~layG~-~~~~~ip~~s~Lvf~vel~~i~~~~ 241 (254)
+|+||+++|||. +..+.||||++|+|+|+|++|++.+
T Consensus 108 ~~~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~~~ 145 (167)
T 1jvw_A 108 RLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDGG 145 (167)
T ss_dssp EEEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGGGC
T ss_pred EEEECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEcCC
Confidence 999999999994 4455799999999999999998654
No 6
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.94 E-value=3.8e-26 Score=182.87 Aligned_cols=109 Identities=24% Similarity=0.462 Sum_probs=102.9
Q ss_pred CCCceEEEEEeccCCC-CCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEEC
Q 025317 131 RDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIP 209 (254)
Q Consensus 131 ~~~Gl~y~i~~~G~G~-~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP 209 (254)
.++|++|+++++|+|. .|+.||.|+|||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++||+++|+||
T Consensus 33 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip 112 (144)
T 3o5e_A 33 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCK 112 (144)
T ss_dssp CSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEEC
Confidence 6799999999999997 799999999999999999999999998889999999999999999999999999999999999
Q ss_pred CCCCCC-CCCCCCCCCCceEEEEEEEEeeec
Q 025317 210 PELGPP-VGPSTFFSAKQFEVFDVELLSVQD 239 (254)
Q Consensus 210 ~~layG-~~~~~~ip~~s~Lvf~vel~~i~~ 239 (254)
|++||| .+.+..||||++|+|+|+|++|+.
T Consensus 113 p~~aYG~~g~~~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 113 PEYAYGSAGSLPKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred hHHCcCCCCCCCCcCCCCeEEEEEEEEEecC
Confidence 999999 455568999999999999999974
No 7
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.94 E-value=3.4e-26 Score=173.81 Aligned_cols=105 Identities=30% Similarity=0.605 Sum_probs=98.2
Q ss_pred ceEEEEEeccCCCC-CCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCC
Q 025317 134 GLIYRDFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPEL 212 (254)
Q Consensus 134 Gl~y~i~~~G~G~~-~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~l 212 (254)
|++|+++++|+|.. ++.||.|++||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++|+++++.||+++
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ 80 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY 80 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence 78999999999987 99999999999999999999999987678999999999999999999999999999999999999
Q ss_pred CCCC-CCCCCCCCCceEEEEEEEEeee
Q 025317 213 GPPV-GPSTFFSAKQFEVFDVELLSVQ 238 (254)
Q Consensus 213 ayG~-~~~~~ip~~s~Lvf~vel~~i~ 238 (254)
+||. +.+..||||++|+|+|+|++|+
T Consensus 81 ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 81 AYGATGHPGIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp TTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred ccCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 9994 4456799999999999999884
No 8
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.94 E-value=3.1e-26 Score=180.35 Aligned_cols=111 Identities=28% Similarity=0.472 Sum_probs=102.9
Q ss_pred CceeCCCceEEE--EEeccCCCC-CCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccE
Q 025317 127 NYTKRDSGLIYR--DFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGK 203 (254)
Q Consensus 127 ~~~~~~~Gl~y~--i~~~G~G~~-~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~ 203 (254)
++.++++|++|+ ++++|+|.. ++.||.|++||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++||+
T Consensus 16 ~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~ 95 (130)
T 2lgo_A 16 TQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEK 95 (130)
T ss_dssp SCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEE
T ss_pred cceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCE
Confidence 566688999999 999999997 99999999999999889999999988778999999999999999999999999999
Q ss_pred EEEEECCCCCCCC-CCCCCCCCCceEEEEEEEEee
Q 025317 204 RRIIIPPELGPPV-GPSTFFSAKQFEVFDVELLSV 237 (254)
Q Consensus 204 ~~i~iP~~layG~-~~~~~ip~~s~Lvf~vel~~i 237 (254)
++|.||++++||. +.+..||||++|+|+|+|++|
T Consensus 96 ~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 96 ALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EEEEECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred EEEEECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 9999999999994 445569999999999999975
No 9
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.94 E-value=5.1e-26 Score=176.15 Aligned_cols=108 Identities=22% Similarity=0.370 Sum_probs=98.9
Q ss_pred CCCceEEEEEeccCCC-CCCCCCeEEEEEEEEEcCCcEEeccccC-------CCCeeEecCCCCchhHHHHHHccCCCcc
Q 025317 131 RDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQ-------GSPARIRMGTNALVPGFEEGIRDMRPGG 202 (254)
Q Consensus 131 ~~~Gl~y~i~~~G~G~-~~~~gd~V~v~Y~~~~~dG~v~dst~~~-------~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge 202 (254)
.++|++|+++++|+|. .|+.||.|++||++++.||++|++++.. ++|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 5789999999999996 6999999999999999999999999853 4799999999999999999999999999
Q ss_pred EEEEEECCCCCCCCCCC--CCCCCCceEEEEEEEEeee
Q 025317 203 KRRIIIPPELGPPVGPS--TFFSAKQFEVFDVELLSVQ 238 (254)
Q Consensus 203 ~~~i~iP~~layG~~~~--~~ip~~s~Lvf~vel~~i~ 238 (254)
+++|+||+++|||.... ..||||++|+|+|+|++|.
T Consensus 82 ~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 82 KARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp EEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred EEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEeC
Confidence 99999999999995433 2699999999999999974
No 10
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.93 E-value=2.4e-26 Score=195.45 Aligned_cols=117 Identities=21% Similarity=0.466 Sum_probs=105.7
Q ss_pred ceeeeeeccCceeCCCceEEEEEeccCCCCCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHcc
Q 025317 118 FEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRD 197 (254)
Q Consensus 118 ~~~~~~~~~~~~~~~~Gl~y~i~~~G~G~~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~ 197 (254)
|...+...+++.++++|++|+++++|+|..|+.||.|+|||++++.||++||++ +.|+.|.+| ++|+||+++|.+
T Consensus 102 fl~~n~~~~gv~~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~g 176 (219)
T 3oe2_A 102 FMAGEKAKPGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQN 176 (219)
T ss_dssp HHHHHHTSTTCEECGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTT
T ss_pred HHHHhccCCCcEECCCCeEEEEEecCCCccCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhC
Confidence 344445566788899999999999999999999999999999999999999999 689999997 899999999999
Q ss_pred CCCccEEEEEECCCCCCCC-CCCCCCCCCceEEEEEEEEeeec
Q 025317 198 MRPGGKRRIIIPPELGPPV-GPSTFFSAKQFEVFDVELLSVQD 239 (254)
Q Consensus 198 mk~Ge~~~i~iP~~layG~-~~~~~ip~~s~Lvf~vel~~i~~ 239 (254)
|++|++++|+|||++|||. +..+.||||++|+|+|+|++|+.
T Consensus 177 Mk~Gek~~v~IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik~ 219 (219)
T 3oe2_A 177 MPTGAKWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVSQ 219 (219)
T ss_dssp CCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCCCEEEEEECchhcCCCCCCCCCCCCCCeEEEEEEEEEEeC
Confidence 9999999999999999994 44446999999999999999863
No 11
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.93 E-value=1e-26 Score=189.60 Aligned_cols=113 Identities=22% Similarity=0.333 Sum_probs=98.7
Q ss_pred eCCCceEEEEEeccCCCC--CCCCCeEEEEEEEEEcC--CcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEE
Q 025317 130 KRDSGLIYRDFEVGKGDC--PKDGQQVIFHYIGYNES--GRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRR 205 (254)
Q Consensus 130 ~~~~Gl~y~i~~~G~G~~--~~~gd~V~v~Y~~~~~d--G~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~ 205 (254)
.+++||+|+++++|+|+. +++||.|+|||++++.| |++||||+.+++|+.|.+|.+++|+||++||.+|++||+++
T Consensus 7 ~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~~ 86 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIAQ 86 (165)
T ss_dssp HHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEEE
T ss_pred ccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCceEE
Confidence 367999999999999975 46899999999999864 99999999999999999999999999999999999999999
Q ss_pred EEECCCCCCCC---------CCCCC-----------------------------CCCCceEEEEEEEEeeecCCc
Q 025317 206 IIIPPELGPPV---------GPSTF-----------------------------FSAKQFEVFDVELLSVQDCQR 242 (254)
Q Consensus 206 i~iP~~layG~---------~~~~~-----------------------------ip~~s~Lvf~vel~~i~~~~~ 242 (254)
|+|||++|||. ..... |+++++|+|+|||++|+++.+
T Consensus 87 ~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~e 161 (165)
T 2lkn_A 87 FLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGT 161 (165)
T ss_dssp EECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTT
T ss_pred EEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCcc
Confidence 99999999981 11111 334478999999999998865
No 12
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.93 E-value=4.4e-26 Score=193.47 Aligned_cols=116 Identities=25% Similarity=0.399 Sum_probs=106.2
Q ss_pred eeeccCceeCCCceEEEEEeccCCCCCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCc
Q 025317 122 VVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPG 201 (254)
Q Consensus 122 ~~~~~~~~~~~~Gl~y~i~~~G~G~~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~G 201 (254)
+...+++.++++|++|+++++|+|..|+.||.|+|||++++.||++||+++..+.|+.|.+ +++|+||+++|.+|++|
T Consensus 95 ~~~~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~G 172 (213)
T 1fd9_A 95 NKNKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQV--SQVIPGWTEALQLMPAG 172 (213)
T ss_dssp HHHSTTEEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEG--GGSCHHHHHHHTTCCTT
T ss_pred hcccCCcEECCCccEEEEEecCCCccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEc--CchhhHHHHHHcCCCCC
Confidence 3445577889999999999999999999999999999999999999999998788999999 58999999999999999
Q ss_pred cEEEEEECCCCCCCC-CCCCCCCCCceEEEEEEEEeeec
Q 025317 202 GKRRIIIPPELGPPV-GPSTFFSAKQFEVFDVELLSVQD 239 (254)
Q Consensus 202 e~~~i~iP~~layG~-~~~~~ip~~s~Lvf~vel~~i~~ 239 (254)
++++|+||++++||. +....||||++|+|+|+|++|++
T Consensus 173 ek~~v~IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 173 STWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp CEEEEEECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEEC
T ss_pred CEEEEEECchhccCccCCCCCCCCCCeEEEEEEEEEEEc
Confidence 999999999999994 44457999999999999999985
No 13
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.93 E-value=4.6e-26 Score=179.09 Aligned_cols=111 Identities=33% Similarity=0.603 Sum_probs=103.2
Q ss_pred CceeCCCceEEEEEeccCCCCCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHcc------CCC
Q 025317 127 NYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRD------MRP 200 (254)
Q Consensus 127 ~~~~~~~Gl~y~i~~~G~G~~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~------mk~ 200 (254)
++.++++|++|+++++|+|..++.||.|++||++++.||++|++++..++|+.|.+|.+++++||+++|.+ |++
T Consensus 6 ~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~ 85 (129)
T 1u79_A 6 EFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLT 85 (129)
T ss_dssp CCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBT
T ss_pred ccEECCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCC
Confidence 56778999999999999999999999999999999889999999987678999999999999999999998 999
Q ss_pred ccEEEEEECCCCCCCCCCC------CCCCCCceEEEEEEEEee
Q 025317 201 GGKRRIIIPPELGPPVGPS------TFFSAKQFEVFDVELLSV 237 (254)
Q Consensus 201 Ge~~~i~iP~~layG~~~~------~~ip~~s~Lvf~vel~~i 237 (254)
|++++|+||++++||.... ..||||++|+|+|+|++|
T Consensus 86 Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 86 GGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 9999999999999995432 469999999999999987
No 14
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.93 E-value=2.9e-26 Score=181.38 Aligned_cols=110 Identities=27% Similarity=0.504 Sum_probs=94.7
Q ss_pred eCCCceEEEEEeccCCCCCCCCCeEEEEEEEEEc-CCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEE
Q 025317 130 KRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNE-SGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIII 208 (254)
Q Consensus 130 ~~~~Gl~y~i~~~G~G~~~~~gd~V~v~Y~~~~~-dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~i 208 (254)
++++|++|+++++|+|..++.||.|++||++++. +|++|++++..++|+.|.+|.+++++||+++|.+|++|++++|+|
T Consensus 23 ~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v~i 102 (134)
T 3b7x_A 23 SGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLF 102 (134)
T ss_dssp SSSSSEEEEEEECCEEEECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCEETCEEEEEE
T ss_pred eCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCCCCCEEEEEE
Confidence 4689999999999999999999999999999988 699999998777899999999999999999999999999999999
Q ss_pred CCCCCCC-CCCCCCCCCCceEEEEEEEEeeec
Q 025317 209 PPELGPP-VGPSTFFSAKQFEVFDVELLSVQD 239 (254)
Q Consensus 209 P~~layG-~~~~~~ip~~s~Lvf~vel~~i~~ 239 (254)
|+++||| .+.+..||||++|+|+|+|++|++
T Consensus 103 p~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~d 134 (134)
T 3b7x_A 103 KPNYAYGTLGCPPLIPPNTTVLFEIELLDFLD 134 (134)
T ss_dssp CGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC-
T ss_pred CHHHCcCCCCCCCCcCcCCeEEEEEEEEEEeC
Confidence 9999999 444556999999999999999863
No 15
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.93 E-value=2.1e-25 Score=175.21 Aligned_cols=114 Identities=22% Similarity=0.406 Sum_probs=100.7
Q ss_pred CceeCCCceEE-EEEecc---CCCCCCCCCeEEEEEEEEE-cCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCc
Q 025317 127 NYTKRDSGLIY-RDFEVG---KGDCPKDGQQVIFHYIGYN-ESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPG 201 (254)
Q Consensus 127 ~~~~~~~Gl~y-~i~~~G---~G~~~~~gd~V~v~Y~~~~-~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~G 201 (254)
+...+++|+.| +++++| +|..++.||.|++||++++ .||++|++++..+.|+.|.+|.+++++||+++|.+|++|
T Consensus 9 ~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~G 88 (129)
T 2vn1_A 9 KVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKN 88 (129)
T ss_dssp EEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTT
T ss_pred CcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCC
Confidence 44456677665 688865 5679999999999999998 799999999877789999999999999999999999999
Q ss_pred cEEEEEECCCCCCCC-CCCCCCCCCceEEEEEEEEeeecC
Q 025317 202 GKRRIIIPPELGPPV-GPSTFFSAKQFEVFDVELLSVQDC 240 (254)
Q Consensus 202 e~~~i~iP~~layG~-~~~~~ip~~s~Lvf~vel~~i~~~ 240 (254)
++++|+||++++||. +.+..||||++|+|+|+|++|+++
T Consensus 89 e~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~~ 128 (129)
T 2vn1_A 89 EKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFREL 128 (129)
T ss_dssp CEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECC
T ss_pred CEEEEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEecC
Confidence 999999999999994 445569999999999999999864
No 16
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.93 E-value=2e-25 Score=176.83 Aligned_cols=110 Identities=25% Similarity=0.436 Sum_probs=102.6
Q ss_pred CCCceEEEEEeccCCC-CCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEEC
Q 025317 131 RDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIP 209 (254)
Q Consensus 131 ~~~Gl~y~i~~~G~G~-~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP 209 (254)
+++|++|+++++|+|. .++.||.|++||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++|++++|+||
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip 91 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIR 91 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 6799999999999996 699999999999999989999999987678999999999999999999999999999999999
Q ss_pred CCCCCC-CCCCCCCCCCceEEEEEEEEeeecC
Q 025317 210 PELGPP-VGPSTFFSAKQFEVFDVELLSVQDC 240 (254)
Q Consensus 210 ~~layG-~~~~~~ip~~s~Lvf~vel~~i~~~ 240 (254)
+++||| .+.+..||+|++|+|+|+|++|+..
T Consensus 92 ~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 92 SDYGYGDAGSPPKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-
T ss_pred hHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC
Confidence 999999 4555779999999999999999865
No 17
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.93 E-value=1.9e-25 Score=189.33 Aligned_cols=110 Identities=35% Similarity=0.666 Sum_probs=103.9
Q ss_pred ceeCCCceEEEEEeccCCCCCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEE
Q 025317 128 YTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRII 207 (254)
Q Consensus 128 ~~~~~~Gl~y~i~~~G~G~~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~ 207 (254)
+.++++|++|+++++|+|..++.||.|++||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++||+++|+
T Consensus 99 ~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v~ 178 (209)
T 3uf8_A 99 VVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT 178 (209)
T ss_dssp CEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEEE
T ss_pred ccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEEE
Confidence 67789999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ECCCCCCC-CCCCCCCCCCceEEEEEEEEee
Q 025317 208 IPPELGPP-VGPSTFFSAKQFEVFDVELLSV 237 (254)
Q Consensus 208 iP~~layG-~~~~~~ip~~s~Lvf~vel~~i 237 (254)
|||++||| .+....||||++|+|+|+|++|
T Consensus 179 Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 179 IPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred ECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99999999 4455569999999999999986
No 18
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.93 E-value=2.6e-25 Score=184.30 Aligned_cols=116 Identities=16% Similarity=0.291 Sum_probs=107.4
Q ss_pred CceeCCCceEEEEEeccCCCCCCCCCeEEEEEEEEEc-CCcEEeccccCCCCeeEecCCC-CchhHHHHHHccCCCccEE
Q 025317 127 NYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNE-SGRRIDSTYLQGSPARIRMGTN-ALVPGFEEGIRDMRPGGKR 204 (254)
Q Consensus 127 ~~~~~~~Gl~y~i~~~G~G~~~~~gd~V~v~Y~~~~~-dG~v~dst~~~~~p~~~~lG~~-~~i~Gl~~aL~~mk~Ge~~ 204 (254)
.+.++++|++|+++++|+|..++.||.|+|||++++. ||++|++++..+.|+.|.+|.+ ++++||+++|.+|++|+++
T Consensus 43 ~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~ 122 (180)
T 2f4e_A 43 EAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERA 122 (180)
T ss_dssp CCEEEETTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCCBTCEE
T ss_pred CcEECCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCCCCCEE
Confidence 4667889999999999999999999999999999998 6999999998788999999998 9999999999999999999
Q ss_pred EEEECCCCCCCCCC---CCCCCCCceEEEEEEEEeeecCCc
Q 025317 205 RIIIPPELGPPVGP---STFFSAKQFEVFDVELLSVQDCQR 242 (254)
Q Consensus 205 ~i~iP~~layG~~~---~~~ip~~s~Lvf~vel~~i~~~~~ 242 (254)
+|+||++++||... ...||||++|+|+|+|++|+++..
T Consensus 123 ~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e 163 (180)
T 2f4e_A 123 LVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKE 163 (180)
T ss_dssp EEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCC
T ss_pred EEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCcc
Confidence 99999999999443 357999999999999999988775
No 19
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.93 E-value=2.5e-25 Score=180.47 Aligned_cols=110 Identities=17% Similarity=0.237 Sum_probs=100.9
Q ss_pred eCCCce-EEEEEeccCCC--CCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEE
Q 025317 130 KRDSGL-IYRDFEVGKGD--CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRI 206 (254)
Q Consensus 130 ~~~~Gl-~y~i~~~G~G~--~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i 206 (254)
++++|+ +|+++++|+|. .++.||.|+|||++++.||++||++ +|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 39 ~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v 114 (157)
T 2jwx_A 39 ILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAMV 114 (157)
T ss_dssp SSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTTCEEEE
T ss_pred ECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence 678897 79999999997 8999999999999999899999984 6999999999999999999999999999999
Q ss_pred EECCCCCCCC-C-CCCCCCCCceEEEEEEEEeeecCCcc
Q 025317 207 IIPPELGPPV-G-PSTFFSAKQFEVFDVELLSVQDCQRR 243 (254)
Q Consensus 207 ~iP~~layG~-~-~~~~ip~~s~Lvf~vel~~i~~~~~~ 243 (254)
+||++++||. + ....||||++|+|+|+|++|++....
T Consensus 115 ~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~~~~ 153 (157)
T 2jwx_A 115 TADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDLEHH 153 (157)
T ss_dssp EECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEECSCC
T ss_pred EECchhcCCcccccCCCcCCCCeEEEEEEEEEEEccccc
Confidence 9999999994 3 34579999999999999999887654
No 20
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.93 E-value=2e-25 Score=190.68 Aligned_cols=117 Identities=34% Similarity=0.690 Sum_probs=105.5
Q ss_pred eeeeeccCceeCCCceEEEEEeccCCCCCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCC
Q 025317 120 VKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMR 199 (254)
Q Consensus 120 ~~~~~~~~~~~~~~Gl~y~i~~~G~G~~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk 199 (254)
..+...+++.++++|++|+++++|+|..|+.||.|+|||++++.||++||+++..+.|+.|.+ +++|+||+++|.+|+
T Consensus 108 ~~~~~~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk 185 (224)
T 1q6h_A 108 EKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKNIK 185 (224)
T ss_dssp HHHHHSTTEEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGGSC
T ss_pred HHhCcCCCeEECCCceEEEEEecccCccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEc--CCcchhHHHHHcCCC
Confidence 333444567778999999999999999999999999999999999999999998788999999 589999999999999
Q ss_pred CccEEEEEECCCCCCCCCCCCCCCCCceEEEEEEEEeee
Q 025317 200 PGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQ 238 (254)
Q Consensus 200 ~Ge~~~i~iP~~layG~~~~~~ip~~s~Lvf~vel~~i~ 238 (254)
+|++++|+||++++||....+.||||++|+|+|+|++|+
T Consensus 186 ~Gek~~v~IP~~laYG~~g~~~IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 186 KGGKIKLVIPPELAYGKAGVPGIPPNSTLVFDVELLDVK 224 (224)
T ss_dssp TTCEEEEEECGGGTTTTTCBTTBCTTCCEEEEEEEEEEC
T ss_pred CCCEEEEEECchhhcCcCCCCCCCCCCEEEEEEEEEEeC
Confidence 999999999999999955444599999999999999984
No 21
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.92 E-value=2.3e-24 Score=166.68 Aligned_cols=105 Identities=18% Similarity=0.250 Sum_probs=96.4
Q ss_pred CCCc-eEEEEEeccCCC--CCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEE
Q 025317 131 RDSG-LIYRDFEVGKGD--CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRII 207 (254)
Q Consensus 131 ~~~G-l~y~i~~~G~G~--~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~ 207 (254)
+++| ++|+++++|+|. .++.||.|++||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|+++++.
T Consensus 10 ~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~~~ 85 (118)
T 2awg_A 10 LGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAMVT 85 (118)
T ss_dssp SSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCTTCEEEEE
T ss_pred CCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCCCCEEEEE
Confidence 5567 999999999997 7999999999999998899999974 69999999999999999999999999999999
Q ss_pred ECCCCCCCC-CCCCCCCCCceEEEEEEEEeeec
Q 025317 208 IPPELGPPV-GPSTFFSAKQFEVFDVELLSVQD 239 (254)
Q Consensus 208 iP~~layG~-~~~~~ip~~s~Lvf~vel~~i~~ 239 (254)
||++++||. +.+..||||++|+|+|+|++|++
T Consensus 86 ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~d 118 (118)
T 2awg_A 86 ADSKYCYGPQGRSPYIPPHAALCLEVTLKTAVD 118 (118)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred EChHHccCCCCCCCccCCCCeEEEEEEEEEecC
Confidence 999999994 44457999999999999999864
No 22
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=2e-24 Score=170.98 Aligned_cols=115 Identities=17% Similarity=0.193 Sum_probs=102.9
Q ss_pred eCCCc-eEEEEEeccCCC--CCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEE
Q 025317 130 KRDSG-LIYRDFEVGKGD--CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRI 206 (254)
Q Consensus 130 ~~~~G-l~y~i~~~G~G~--~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i 206 (254)
.+++| ++|+++++|+|. .++.||.|++||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 13 ~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~v 88 (135)
T 2d9f_A 13 ILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAMV 88 (135)
T ss_dssp SSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGGSCTTCEEEE
T ss_pred ECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhCCCCCCEEEE
Confidence 35666 999999999997 8999999999999999999999973 6999999999999999999999999999999
Q ss_pred EECCCCCCCC-C-CCCCCCCCceEEEEEEEEeeecCCcccCcee
Q 025317 207 IIPPELGPPV-G-PSTFFSAKQFEVFDVELLSVQDCQRRTIGFY 248 (254)
Q Consensus 207 ~iP~~layG~-~-~~~~ip~~s~Lvf~vel~~i~~~~~~~~~~~ 248 (254)
+||++++||. + ....||||++|+|+|+|++|++........+
T Consensus 89 ~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~~e~~s~ 132 (135)
T 2d9f_A 89 TADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPDLEMSGP 132 (135)
T ss_dssp EECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCSSSSCCC
T ss_pred EEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCchhhcCc
Confidence 9999999994 3 4557999999999999999998776655443
No 23
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.90 E-value=2.2e-23 Score=156.94 Aligned_cols=97 Identities=31% Similarity=0.532 Sum_probs=89.2
Q ss_pred CCCCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCCCCC-CCCCCCC
Q 025317 145 GDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELGPPV-GPSTFFS 223 (254)
Q Consensus 145 G~~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~-~~~~~ip 223 (254)
|.+++.||.|++||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++|+++++.||++++||. +....||
T Consensus 3 g~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip 82 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIP 82 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTBC
T ss_pred CCcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcC
Confidence 467999999999999998899999999877789999999999999999999999999999999999999994 4445799
Q ss_pred CCceEEEEEEEEeeecCC
Q 025317 224 AKQFEVFDVELLSVQDCQ 241 (254)
Q Consensus 224 ~~s~Lvf~vel~~i~~~~ 241 (254)
+|++|+|+|+|++|++++
T Consensus 83 ~~~~l~f~v~l~~v~~~~ 100 (102)
T 2pbc_A 83 GGATLVFEVELLKIERRT 100 (102)
T ss_dssp TTCCEEEEEEEEEEGGGC
T ss_pred cCCeEEEEEEEEEecccC
Confidence 999999999999998753
No 24
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.89 E-value=1.8e-22 Score=178.07 Aligned_cols=110 Identities=24% Similarity=0.389 Sum_probs=103.1
Q ss_pred CCCceEEEEEeccCCCC-CCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEEC
Q 025317 131 RDSGLIYRDFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIP 209 (254)
Q Consensus 131 ~~~Gl~y~i~~~G~G~~-~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP 209 (254)
+++|++|+++++|+|.. ++.||.|+|||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++|++++|+||
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ip 128 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCK 128 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEEC
Confidence 57899999999999986 99999999999999999999999987778999999999999999999999999999999999
Q ss_pred CCCCCC-CCCCCCCCCCceEEEEEEEEeeecC
Q 025317 210 PELGPP-VGPSTFFSAKQFEVFDVELLSVQDC 240 (254)
Q Consensus 210 ~~layG-~~~~~~ip~~s~Lvf~vel~~i~~~ 240 (254)
+++||| .+.+..||+|++|+|+|+|++++..
T Consensus 129 p~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~~ 160 (280)
T 1q1c_A 129 PEYAYGSAGSPPKIPPNATLVFEVELFEFKGE 160 (280)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE
T ss_pred cHHhCCCcCccCCCCCCCcEEEEEEeeeeccc
Confidence 999999 4556679999999999999999764
No 25
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.87 E-value=1.6e-21 Score=177.51 Aligned_cols=131 Identities=17% Similarity=0.309 Sum_probs=116.5
Q ss_pred CCCccccccceeeeeeccCc--eeCCCceEEEEEeccCC-CCCCCCCeEEEEEEEEEcCCcEEeccc-cCCCCeeEecCC
Q 025317 109 GFPNFIREGFEVKVVTSENY--TKRDSGLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTY-LQGSPARIRMGT 184 (254)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~--~~~~~Gl~y~i~~~G~G-~~~~~gd~V~v~Y~~~~~dG~v~dst~-~~~~p~~~~lG~ 184 (254)
.+|+.....++..++.+... ...+.+++|+++++|+| ..++.||.|++||++++.||++|+++. ..++|+.|.+|.
T Consensus 218 ~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~~p~~f~~G~ 297 (356)
T 3jxv_A 218 AVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDE 297 (356)
T ss_dssp CBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTSCCCEEETTT
T ss_pred cCCCCcEEEEEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccccCCcCEEEEECC
Confidence 47778888888888888663 23578999999999999 789999999999999999999999884 557899999999
Q ss_pred CCchhHHHHHHccCCCccEEEEEECCCCCCCCCC---CCCCCCCceEEEEEEEEeeec
Q 025317 185 NALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGP---STFFSAKQFEVFDVELLSVQD 239 (254)
Q Consensus 185 ~~~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~~~---~~~ip~~s~Lvf~vel~~i~~ 239 (254)
+++|+||+++|.+|++||+++|+|||++|||... ...||+|++|+|+|+|++|++
T Consensus 298 g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 298 EAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp TSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred CccchHHHHHHhCCCCCCEEEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence 9999999999999999999999999999999443 356899999999999999975
No 26
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.86 E-value=6.8e-22 Score=184.60 Aligned_cols=110 Identities=24% Similarity=0.440 Sum_probs=82.8
Q ss_pred CCCceEEEEEeccCCCC-CCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEEC
Q 025317 131 RDSGLIYRDFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIP 209 (254)
Q Consensus 131 ~~~Gl~y~i~~~G~G~~-~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP 209 (254)
+++|++|+++++|+|.. ++.||.|+|||++++.||++|++++..+.|+.|.+|.+.+++||+++|.+|++||+++|+||
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~ 108 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCK 108 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEC
Confidence 67999999999999986 99999999999999889999999998788999999999999999999999999999999999
Q ss_pred CCCCCC-CCCCCCCCCCceEEEEEEEEeeecC
Q 025317 210 PELGPP-VGPSTFFSAKQFEVFDVELLSVQDC 240 (254)
Q Consensus 210 ~~layG-~~~~~~ip~~s~Lvf~vel~~i~~~ 240 (254)
++++|| .+.++.||+|++|+|+|+|++|+..
T Consensus 109 ~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~ 140 (457)
T 1kt0_A 109 PEYAYGSAGSLPKIPSNATLFFEIELLDFKGE 140 (457)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE
T ss_pred hHHhccccCCCCCCCCCCcEEEEEeeceeecc
Confidence 999999 5556789999999999999999764
No 27
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.86 E-value=2.5e-21 Score=173.94 Aligned_cols=116 Identities=15% Similarity=0.287 Sum_probs=105.4
Q ss_pred CceeCCCceEEEEEeccCCCCCCCCCeEEEEEEEEEcC-CcEEeccccCCCCeeEecCCC-CchhHHHHHHccCCCccEE
Q 025317 127 NYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNES-GRRIDSTYLQGSPARIRMGTN-ALVPGFEEGIRDMRPGGKR 204 (254)
Q Consensus 127 ~~~~~~~Gl~y~i~~~G~G~~~~~gd~V~v~Y~~~~~d-G~v~dst~~~~~p~~~~lG~~-~~i~Gl~~aL~~mk~Ge~~ 204 (254)
...++++|+.|+++++|+|..|+.||.|+|||++++.+ |++|++++..+.|+.|.+|.+ ++|+||+++|.+|++||++
T Consensus 43 ~~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~ 122 (338)
T 2if4_A 43 EAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERA 122 (338)
T ss_dssp CCEEEETTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEE
T ss_pred CceeCCCCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeE
Confidence 34556799999999999999999999999999999984 999999988788999999998 8999999999999999999
Q ss_pred EEEECCCCCCCCCC---CCCCCCCceEEEEEEEEeeecCCc
Q 025317 205 RIIIPPELGPPVGP---STFFSAKQFEVFDVELLSVQDCQR 242 (254)
Q Consensus 205 ~i~iP~~layG~~~---~~~ip~~s~Lvf~vel~~i~~~~~ 242 (254)
+|+||++++||... ...||++++++|+|+|+++.....
T Consensus 123 ~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e 163 (338)
T 2if4_A 123 LVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKE 163 (338)
T ss_dssp EEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCC
T ss_pred EEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCcc
Confidence 99999999999433 367999999999999999987654
No 28
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.85 E-value=4.7e-23 Score=187.59 Aligned_cols=112 Identities=30% Similarity=0.532 Sum_probs=2.2
Q ss_pred eCCCceEEEEEeccCC-CCCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEE
Q 025317 130 KRDSGLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIII 208 (254)
Q Consensus 130 ~~~~Gl~y~i~~~G~G-~~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~i 208 (254)
.+++|++|+++++|+| ..|+.||.|++||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++|++++|+|
T Consensus 8 ~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~Ge~~~~~i 87 (356)
T 3jxv_A 8 IGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTI 87 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCCCEEEEEE
Confidence 3689999999999999 689999999999999999999999999878899999999999999999999999999999999
Q ss_pred CCCCCCC-CCCCCCCCCCceEEEEEEEEeeecCC
Q 025317 209 PPELGPP-VGPSTFFSAKQFEVFDVELLSVQDCQ 241 (254)
Q Consensus 209 P~~layG-~~~~~~ip~~s~Lvf~vel~~i~~~~ 241 (254)
|+++||| .+....||||++|+|+|+|++++++.
T Consensus 88 p~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~~~ 121 (356)
T 3jxv_A 88 PPELAYGESGSPPTIPANATLQFDVELLSWTSVR 121 (356)
T ss_dssp ------------------------------CCEE
T ss_pred ChHHhCCCCCCCCCcCCCCEEEEEeeEEeeeccc
Confidence 9999999 55556899999999999999997543
No 29
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.83 E-value=4.3e-20 Score=162.88 Aligned_cols=131 Identities=21% Similarity=0.281 Sum_probs=109.7
Q ss_pred CCCCccccccceeeeeeccCc-ee--CCCceEEEEEeccCCC-CCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecC
Q 025317 108 EGFPNFIREGFEVKVVTSENY-TK--RDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMG 183 (254)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~-~~--~~~Gl~y~i~~~G~G~-~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG 183 (254)
..+|......|..++..+... .. .+.|++|+++++|+|. .++.||.|++||++++ ||++|++ +|+.|.+|
T Consensus 140 ~~Ip~~~~lvf~Vel~~i~~~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~~fd~-----~~~~f~lG 213 (280)
T 1q1c_A 140 PKIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQ-----RELRFEIG 213 (280)
T ss_dssp TTBCTTCCEEEEEEEEEEECEECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTEEEEE-----EEEEEETT
T ss_pred CCCCCCCcEEEEEEeeeecccccccccccceeEEeeecccccccccCCceEEEEEEEEe-CCEEEec-----CCeEEEec
Confidence 346666777777776665442 12 5789999999999997 6899999999999998 9999997 38999999
Q ss_pred CCC---chhHHHHHHccCCCccEEEEEECCCCCCCCCC-CC-CCCCCceEEEEEEEEeeecCCccc
Q 025317 184 TNA---LVPGFEEGIRDMRPGGKRRIIIPPELGPPVGP-ST-FFSAKQFEVFDVELLSVQDCQRRT 244 (254)
Q Consensus 184 ~~~---~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~~~-~~-~ip~~s~Lvf~vel~~i~~~~~~~ 244 (254)
.++ +++||+++|.+|++||+++|+||++++||... +. .||+|++|+|+|+|++|+++++.+
T Consensus 214 ~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~~~~~W 279 (280)
T 1q1c_A 214 EGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESW 279 (280)
T ss_dssp CGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEECCCC--
T ss_pred CCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeCCCCCC
Confidence 887 59999999999999999999999999999543 33 599999999999999999877543
No 30
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.75 E-value=3.8e-18 Score=139.49 Aligned_cols=70 Identities=24% Similarity=0.422 Sum_probs=67.2
Q ss_pred CCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCCCCC
Q 025317 147 CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELGPPV 216 (254)
Q Consensus 147 ~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~ 216 (254)
++++||.|++||++++.||++||+++..++|+.|.+|.+++|+||+++|.+|++|++++|.|||++|||.
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~ 93 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGV 93 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCC
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCC
Confidence 6899999999999999999999999887789999999999999999999999999999999999999984
No 31
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.74 E-value=3.2e-18 Score=131.28 Aligned_cols=87 Identities=18% Similarity=0.345 Sum_probs=75.9
Q ss_pred CCCCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCCCCCCCCCCCCC
Q 025317 145 GDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSA 224 (254)
Q Consensus 145 G~~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~~~~~~ip~ 224 (254)
+.+++.||.|++||++++ ||++|++++ ++|+.|.+|.+++|+||+++|.+|++|++++|.||+...||... .+
T Consensus 27 ~~~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~----~~ 99 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKE----LQ 99 (113)
T ss_dssp --CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSG----GG
T ss_pred CCCCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCC----CC
Confidence 457999999999999998 999999995 68999999999999999999999999999999997444498543 26
Q ss_pred CceEEEEEEEEeee
Q 025317 225 KQFEVFDVELLSVQ 238 (254)
Q Consensus 225 ~s~Lvf~vel~~i~ 238 (254)
+++|+|+|+|++|+
T Consensus 100 g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 100 SKPVTFEVVLKAIK 113 (113)
T ss_dssp SCCCEEEEEECCBC
T ss_pred CCEEEEEEEEEEEC
Confidence 79999999999874
No 32
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.71 E-value=2.3e-17 Score=133.41 Aligned_cols=69 Identities=30% Similarity=0.551 Sum_probs=64.5
Q ss_pred CCCCCeEEEEEEEEEcCCcEEeccccC-------------CCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCCC
Q 025317 148 PKDGQQVIFHYIGYNESGRRIDSTYLQ-------------GSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELGP 214 (254)
Q Consensus 148 ~~~gd~V~v~Y~~~~~dG~v~dst~~~-------------~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~lay 214 (254)
+++||.|++||++++ ||++||+++.. ++|+.|.+|.+++++||+++|.+|++|+++++.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 689999999999999 99999999863 3799999999999999999999999999999999999999
Q ss_pred CCC
Q 025317 215 PVG 217 (254)
Q Consensus 215 G~~ 217 (254)
|..
T Consensus 81 G~~ 83 (157)
T 3pr9_A 81 GKR 83 (157)
T ss_dssp CCC
T ss_pred CCC
Confidence 853
No 33
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.71 E-value=8.8e-17 Score=131.80 Aligned_cols=96 Identities=18% Similarity=0.239 Sum_probs=83.4
Q ss_pred CCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCCCCCCCCCC-----
Q 025317 147 CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTF----- 221 (254)
Q Consensus 147 ~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~~~~~~----- 221 (254)
+++.||.|+++|++++.||++|++++. .+|+.|.+|.+++++||+++|.+|++|++++|.|||++|||...+..
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~-~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~ 80 (171)
T 2k8i_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPV-SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVP 80 (171)
T ss_dssp CCCTTEEEEEEEEEEETTSCEEEECCS-SSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCCTTSEEEEE
T ss_pred cCCCCCEEEEEEEEEECCCCEEeeccC-CcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCChhhEEEee
Confidence 378999999999999889999999976 47999999999999999999999999999999999999999542211
Q ss_pred -------------------------------------------CCCCceEEEEEEEEeeecCCcc
Q 025317 222 -------------------------------------------FSAKQFEVFDVELLSVQDCQRR 243 (254)
Q Consensus 222 -------------------------------------------ip~~s~Lvf~vel~~i~~~~~~ 243 (254)
--+|.+|.|+|+|++|++...+
T Consensus 81 ~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~~at~e 145 (171)
T 2k8i_A 81 KDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEE 145 (171)
T ss_dssp GGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEEEESCCSSCCCEEEEEEEEEEEEECCSH
T ss_pred HHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEEEEEEEeccCCHH
Confidence 1267899999999999887643
No 34
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.70 E-value=1e-16 Score=128.94 Aligned_cols=70 Identities=24% Similarity=0.351 Sum_probs=65.9
Q ss_pred CCCCCCCeEEEEEEEEEc-CCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCCCCC
Q 025317 146 DCPKDGQQVIFHYIGYNE-SGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELGPPV 216 (254)
Q Consensus 146 ~~~~~gd~V~v~Y~~~~~-dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~ 216 (254)
++++.||.|++||++++. ||++|++++. ++|+.|.+|.+++++||+++|.+|++|+++++.|||++|||.
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~-~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~ 75 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNIS-KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGV 75 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTT-TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCS
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCC-CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCC
Confidence 468899999999999988 9999999976 479999999999999999999999999999999999999984
No 35
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.68 E-value=1.9e-16 Score=132.42 Aligned_cols=69 Identities=17% Similarity=0.219 Sum_probs=65.0
Q ss_pred CCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCCCCC
Q 025317 147 CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELGPPV 216 (254)
Q Consensus 147 ~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~ 216 (254)
++++||.|+|||++++.||++|++++. .+|+.|.+|.+++|+||+++|.+|++|++++|.|||++|||.
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~-~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe 70 (196)
T 2kfw_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPV-SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQ 70 (196)
T ss_dssp CCCSSCEEEEEEEEEETTTEEEEECCT-TSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSC
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecCC-CCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCC
Confidence 378999999999999889999999976 479999999999999999999999999999999999999984
No 36
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.67 E-value=5.4e-17 Score=130.58 Aligned_cols=72 Identities=29% Similarity=0.465 Sum_probs=65.9
Q ss_pred CCCCCCeEEEEEEEEEcCCcEEecccc-------------CCCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCC
Q 025317 147 CPKDGQQVIFHYIGYNESGRRIDSTYL-------------QGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELG 213 (254)
Q Consensus 147 ~~~~gd~V~v~Y~~~~~dG~v~dst~~-------------~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~la 213 (254)
++++||.|++||++++.||++||+++. ..+|+.|.+|.+++++||+++|.+|++|+++++.|||++|
T Consensus 1 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~a 80 (151)
T 1ix5_A 1 MVDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKA 80 (151)
T ss_dssp CCCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTS
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHH
Confidence 368999999999999889999999974 2469999999999999999999999999999999999999
Q ss_pred CCCCC
Q 025317 214 PPVGP 218 (254)
Q Consensus 214 yG~~~ 218 (254)
||...
T Consensus 81 YG~~~ 85 (151)
T 1ix5_A 81 YGNRN 85 (151)
T ss_dssp SCSCC
T ss_pred CCCCC
Confidence 99543
No 37
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.67 E-value=3.1e-16 Score=134.05 Aligned_cols=94 Identities=26% Similarity=0.427 Sum_probs=82.1
Q ss_pred CCCCCeEEEEEEEEEcCCcEEeccccC-------------CCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCCC
Q 025317 148 PKDGQQVIFHYIGYNESGRRIDSTYLQ-------------GSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELGP 214 (254)
Q Consensus 148 ~~~gd~V~v~Y~~~~~dG~v~dst~~~-------------~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~lay 214 (254)
++.||.|++||++++ ||++||+++.. +.|+.|.+|.+++++||+++|.+|++|+++++.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 689999999999999 99999999863 3799999999999999999999999999999999999999
Q ss_pred CCCCC---------------------------------------------CCCCCCceEEEEEEEEeeecCCc
Q 025317 215 PVGPS---------------------------------------------TFFSAKQFEVFDVELLSVQDCQR 242 (254)
Q Consensus 215 G~~~~---------------------------------------------~~ip~~s~Lvf~vel~~i~~~~~ 242 (254)
|...+ +.--+|.+|.|+|+|++|++...
T Consensus 81 Ge~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~eat~ 153 (231)
T 3prb_A 81 GKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVVDDKK 153 (231)
T ss_dssp CCCCGGGEEEEETHHHHTTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEECCSHH
T ss_pred CCCChHHEEecCHHHCCcccCCCCCCcEEEecCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEecCCH
Confidence 84221 11226899999999999987754
No 38
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.61 E-value=6.6e-15 Score=131.75 Aligned_cols=108 Identities=21% Similarity=0.329 Sum_probs=96.0
Q ss_pred eeCCCceEEEEEeccCCC-CCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCC---chhHHHHHHccCCCccEE
Q 025317 129 TKRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNA---LVPGFEEGIRDMRPGGKR 204 (254)
Q Consensus 129 ~~~~~Gl~y~i~~~G~G~-~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~---~i~Gl~~aL~~mk~Ge~~ 204 (254)
++.++|+.|+++++|+|. .|..||.|+|||++++ +|++||++ |+.|.+|.+. ++++|+++|.+|++|+++
T Consensus 21 ~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~ 94 (336)
T 1p5q_A 21 MEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQRMEKGEHS 94 (336)
T ss_dssp -CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred ecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-----CeEEEeCCCCccccchHHHHHHhcCCCCCeE
Confidence 346799999999999997 7999999999999998 99999987 8999999875 589999999999999999
Q ss_pred EEEECCCCCCCCCC-CC-CCCCCceEEEEEEEEeeecCCc
Q 025317 205 RIIIPPELGPPVGP-ST-FFSAKQFEVFDVELLSVQDCQR 242 (254)
Q Consensus 205 ~i~iP~~layG~~~-~~-~ip~~s~Lvf~vel~~i~~~~~ 242 (254)
.+.|+|+++||... .. .||+++++.|+++|.++.....
T Consensus 95 ~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~ 134 (336)
T 1p5q_A 95 IVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKE 134 (336)
T ss_dssp EEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCC
T ss_pred EEEECCccccCcCCCCccCCCCCCeEEEEEEEeecccccc
Confidence 99999999999433 32 5999999999999999987643
No 39
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.59 E-value=2.7e-15 Score=121.40 Aligned_cols=63 Identities=21% Similarity=0.272 Sum_probs=60.3
Q ss_pred CCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCCCCC
Q 025317 148 PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELGPPV 216 (254)
Q Consensus 148 ~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~ 216 (254)
+++||.|++||+++ .||++|++++ +.|.+|.+++++||+++|.+|++|++++|.|||++|||.
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~ 65 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGP 65 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCC
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCC
Confidence 68999999999999 8999999996 899999999999999999999999999999999999984
No 40
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.47 E-value=9.1e-14 Score=129.35 Aligned_cols=89 Identities=19% Similarity=0.324 Sum_probs=81.2
Q ss_pred CCCCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCCCCCCCCCCCCC
Q 025317 145 GDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSA 224 (254)
Q Consensus 145 G~~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~~~~~~ip~ 224 (254)
+.+++.||.|++||+++. ||+.|++++ +.|+.|.+|.+.+++||+++|.||++|+++.|.+|++.+||.... +
T Consensus 155 ~~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l----a 227 (432)
T 1w26_A 155 DGAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL----K 227 (432)
T ss_dssp SSCCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT----S
T ss_pred CCCCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC----C
Confidence 457899999999999995 999999986 579999999999999999999999999999999999999996543 6
Q ss_pred CceEEEEEEEEeeecC
Q 025317 225 KQFEVFDVELLSVQDC 240 (254)
Q Consensus 225 ~s~Lvf~vel~~i~~~ 240 (254)
|.+++|+|+|++|+..
T Consensus 228 g~~~~F~V~v~~v~~~ 243 (432)
T 1w26_A 228 GKAAKFAINLKKVEER 243 (432)
T ss_dssp SCEEEEEEECCEECCE
T ss_pred CceEEEEEEEEEEecc
Confidence 8999999999999765
No 41
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.35 E-value=4.5e-13 Score=123.17 Aligned_cols=98 Identities=17% Similarity=0.288 Sum_probs=83.3
Q ss_pred CCCCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCCCCCCCCCCCCC
Q 025317 145 GDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSA 224 (254)
Q Consensus 145 G~~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~~~~~~ip~ 224 (254)
+..++.||.|++||+++ .||+.|+++. +.++.|.+|.+.+++||+++|.||++|++++|.||+...||.... +
T Consensus 158 ~~~~~~gD~V~i~y~g~-~dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l----a 230 (392)
T 1t11_A 158 DEAAENGKRVSIDFVGS-IDGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL----K 230 (392)
T ss_dssp SCCCCTTCEEEEEEEEE-SSSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT----S
T ss_pred CCCCCCCCEEEEEEEEE-ECCEEccCCC--ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC----C
Confidence 34689999999999999 5999999883 579999999999999999999999999999999987778885443 6
Q ss_pred CceEEEEEEEEeeecC--CcccCceee
Q 025317 225 KQFEVFDVELLSVQDC--QRRTIGFYS 249 (254)
Q Consensus 225 ~s~Lvf~vel~~i~~~--~~~~~~~~~ 249 (254)
|.+++|+|+|++|+.. +.-++.|..
T Consensus 231 Gk~~~F~V~v~~i~~~~lpeldDEfak 257 (392)
T 1t11_A 231 GKAAKFAIKVNKVEARELPELNDEFVA 257 (392)
T ss_dssp SCEEEECCCEEEEEEEECCCCSTGGGG
T ss_pred CCeEEEEEEEEEEEcCCCCCcCHHHHH
Confidence 8999999999999755 344445553
No 42
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.33 E-value=1.4e-11 Score=114.60 Aligned_cols=129 Identities=19% Similarity=0.315 Sum_probs=106.9
Q ss_pred CCCCccccccceeeeeeccCce-eCCCceEEEEEeccCC-CCCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCC
Q 025317 108 EGFPNFIREGFEVKVVTSENYT-KRDSGLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTN 185 (254)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~Gl~y~i~~~G~G-~~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~ 185 (254)
..+|......|.++++.+.... ..+.++.++++++|.| +.|..||.|++||++++ +|++|++. ++.|.+|.+
T Consensus 120 ~~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f~~~-----~~~f~~g~g 193 (457)
T 1kt0_A 120 PKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GGRMFDCR-----DVAFTVGEG 193 (457)
T ss_dssp TTBCTTCCEEEEEEEEEEECEETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCG
T ss_pred CCCCCCCcEEEEEeeceeecccccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CCeEEecC-----ceEEEeCCC
Confidence 3566777777887777665532 2467889999999988 47999999999999998 99999974 589999965
Q ss_pred ---CchhHHHHHHccCCCccEEEEEECCCCCCCCCC--CCCCCCCceEEEEEEEEeeecCCc
Q 025317 186 ---ALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGP--STFFSAKQFEVFDVELLSVQDCQR 242 (254)
Q Consensus 186 ---~~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~~~--~~~ip~~s~Lvf~vel~~i~~~~~ 242 (254)
.++++|+.|+..|++|+++.|.++|.++|+... ...||+++.+.|++++.++.+...
T Consensus 194 ~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~ 255 (457)
T 1kt0_A 194 EDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKE 255 (457)
T ss_dssp GGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCCC
T ss_pred ccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCcc
Confidence 589999999999999999999999999998433 235999999999999999887653
No 43
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=98.28 E-value=1.3e-06 Score=81.06 Aligned_cols=75 Identities=13% Similarity=0.091 Sum_probs=64.6
Q ss_pred CCCCCCeEEEEEEEEEcCCcEEeccccCCCCeeEecCCCCchhHHHHHHccCCCccEEEEEECCCCCCCCCCCCCCCCCc
Q 025317 147 CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSAKQ 226 (254)
Q Consensus 147 ~~~~gd~V~v~Y~~~~~dG~v~dst~~~~~p~~~~lG~~~~i~Gl~~aL~~mk~Ge~~~i~iP~~layG~~~~~~ip~~s 226 (254)
.++.||.|+++|.++ .||..|+++. +.++.+.+|.+. + |+++|.||++|++++|.+.. +|.
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~~--~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF-------------aGk 214 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTSR--EYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY-------------EGK 214 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEEE--EEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE-------------TTE
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCCC--CCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee-------------CCC
Confidence 578999999999998 5999999873 367888888876 3 99999999999999999854 477
Q ss_pred eEEEEEEEEeeecC
Q 025317 227 FEVFDVELLSVQDC 240 (254)
Q Consensus 227 ~Lvf~vel~~i~~~ 240 (254)
+..|+|+|.+|+..
T Consensus 215 ~a~F~VtV~~Ik~~ 228 (433)
T 3gty_X 215 KYTYKLEVEEVYKR 228 (433)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred eEEEEEEEEEEEEe
Confidence 89999999999765
No 44
>4edp_A ABC transporter, substrate-binding protein; clostridium PERF ATCC 13124, center for structural genomics of infectious DI csgid; 1.85A {Clostridium perfringens}
Probab=71.07 E-value=0.84 Score=39.04 Aligned_cols=27 Identities=30% Similarity=0.358 Sum_probs=0.0
Q ss_pred cchhhhHHHHHHHHHhhhhhhcccCCC
Q 025317 56 VKLKRRVVPFLLFSSGLFPTLSASGKT 82 (254)
Q Consensus 56 ~~Mrrr~l~~ll~~~~l~~~~~sc~~~ 82 (254)
..||||.++.+++++++++++++|+..
T Consensus 2 ~~Mkk~~~~~~~~~~~~~~~lagC~~~ 28 (351)
T 4edp_A 2 NAMKKKILATLLTGLVLGTSLVGCGKT 28 (351)
T ss_dssp ---------------------------
T ss_pred chHHHHHHHHHHHHHHHHHHhheeCCC
Confidence 368888776666655555568899854
No 45
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=65.90 E-value=36 Score=26.39 Aligned_cols=23 Identities=9% Similarity=0.094 Sum_probs=20.1
Q ss_pred hhHHHHHHccCCCccEEEEEECC
Q 025317 188 VPGFEEGIRDMRPGGKRRIIIPP 210 (254)
Q Consensus 188 i~Gl~~aL~~mk~Ge~~~i~iP~ 210 (254)
...+-.||.|.++|+.+.+..|.
T Consensus 121 ~SPlg~ALlGk~vGD~v~v~~P~ 143 (158)
T 2p4v_A 121 DSPMARALLKKEVGDLAVVNTPA 143 (158)
T ss_dssp TSHHHHHSTTCCTTCEEEEECSS
T ss_pred CCHHHHHhcCCCCCCEEEEEcCC
Confidence 45688999999999999998875
No 46
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=59.21 E-value=54 Score=24.58 Aligned_cols=23 Identities=13% Similarity=0.231 Sum_probs=20.1
Q ss_pred hhHHHHHHccCCCccEEEEEECC
Q 025317 188 VPGFEEGIRDMRPGGKRRIIIPP 210 (254)
Q Consensus 188 i~Gl~~aL~~mk~Ge~~~i~iP~ 210 (254)
...+-.||.|.++|+.+.+..|.
T Consensus 91 ~SPlG~ALlGk~~GD~v~v~~p~ 113 (136)
T 3bmb_A 91 MAPVGAALLGLRVGDSIHWELPG 113 (136)
T ss_dssp TSHHHHHHTTCBTTCEEEEEETT
T ss_pred CCHHHHHHcCCCCCCEEEEEcCC
Confidence 34688999999999999998875
No 47
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=53.21 E-value=52 Score=25.31 Aligned_cols=23 Identities=13% Similarity=0.172 Sum_probs=20.1
Q ss_pred hhHHHHHHccCCCccEEEEEECC
Q 025317 188 VPGFEEGIRDMRPGGKRRIIIPP 210 (254)
Q Consensus 188 i~Gl~~aL~~mk~Ge~~~i~iP~ 210 (254)
...+-.||.|.++|+.+.+-.|.
T Consensus 122 ~SPlG~ALlGk~~GD~v~~~~p~ 144 (156)
T 2f23_A 122 ASPMGKALLGHRVGDVLSLDTPK 144 (156)
T ss_dssp TSHHHHHHTTCCTTCEEEEEETT
T ss_pred CCHHHHHHcCCCCCCEEEEEcCC
Confidence 34688999999999999998875
No 48
>4gd5_A Phosphate ABC transporter, phosphate-binding PROT; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE; 1.70A {Clostridium perfringens}
Probab=52.78 E-value=2.9 Score=35.23 Aligned_cols=27 Identities=7% Similarity=0.007 Sum_probs=0.0
Q ss_pred cchhhhHHHHHHHHHhhhhhhcccCCC
Q 025317 56 VKLKRRVVPFLLFSSGLFPTLSASGKT 82 (254)
Q Consensus 56 ~~Mrrr~l~~ll~~~~l~~~~~sc~~~ 82 (254)
.+||||+++.+++++...+.+++|+..
T Consensus 3 ~M~kk~~~~~~~~~~l~~~~l~gc~~~ 29 (279)
T 4gd5_A 3 AMFKKRLIAIIGTIFIGATAMVGCNSG 29 (279)
T ss_dssp ---------------------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 467777766544443334557788653
No 49
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=52.18 E-value=35 Score=25.87 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=26.4
Q ss_pred hHHHHHHccCCCccEEEEEECCCCCCCCCCCCCCCCCceEEEEEEEEeeecC
Q 025317 189 PGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQDC 240 (254)
Q Consensus 189 ~Gl~~aL~~mk~Ge~~~i~iP~~layG~~~~~~ip~~s~Lvf~vel~~i~~~ 240 (254)
..+-.||.|.++|+.+.+..|.. . ...++|++|.-.
T Consensus 95 SPlG~ALlGk~vGD~v~v~~P~G--------------~--~~~~~I~~I~~~ 130 (141)
T 2pn0_A 95 APVGSALLGLAQGDEIEWPKPGG--------------G--VLRVRIVEVTYQ 130 (141)
T ss_dssp STTHHHHTTCBTTCEEEEECTTS--------------S--EEEEEEEEEEC-
T ss_pred CHHHHHHcCCCCCCEEEEEcCCC--------------C--EEEEEEEEEEeC
Confidence 45778999999999999988752 1 256677777643
No 50
>3ucp_A UNDA; beta-barrel, C-type cytochrome, electron transport, C-type H cell surface, transport protein; HET: HEC; 1.76A {Shewanella SP} PDB: 3ufh_A* 3ufk_A*
Probab=38.05 E-value=20 Score=34.17 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=12.6
Q ss_pred eEEEEEEEEEcCCcEEe
Q 025317 153 QVIFHYIGYNESGRRID 169 (254)
Q Consensus 153 ~V~v~Y~~~~~dG~v~d 169 (254)
.|+|.|++.+.+|..+.
T Consensus 67 ~~~v~f~~~n~~g~~v~ 83 (874)
T 3ucp_A 67 TVSVDIVLTNANGVPVT 83 (874)
T ss_dssp EEEEEEEEECTTCCBEE
T ss_pred cEEEEEEEECCCCCeee
Confidence 57788888887776654
No 51
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=31.00 E-value=55 Score=25.29 Aligned_cols=23 Identities=13% Similarity=0.081 Sum_probs=16.9
Q ss_pred hhHHHHHHccCCCccEEEEEECC
Q 025317 188 VPGFEEGIRDMRPGGKRRIIIPP 210 (254)
Q Consensus 188 i~Gl~~aL~~mk~Ge~~~i~iP~ 210 (254)
...+-.||.|.++|+.+.+..|.
T Consensus 123 ~SPlG~ALlGk~~GD~v~v~~p~ 145 (158)
T 1grj_A 123 NSPIARGLIGKEEDDVVVIKTPG 145 (158)
T ss_dssp SSHHHHHHTTCBTTCEECC----
T ss_pred CCHHHHHHcCCCCCCEEEEEcCC
Confidence 45688999999999999988875
No 52
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=22.82 E-value=18 Score=30.95 Aligned_cols=23 Identities=9% Similarity=-0.249 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHhhhhhhcccCC
Q 025317 58 LKRRVVPFLLFSSGLFPTLSASGK 81 (254)
Q Consensus 58 Mrrr~l~~ll~~~~l~~~~~sc~~ 81 (254)
||++.++.+++ +++.++|++|+.
T Consensus 1 m~~~~~~~~~~-l~~~~~l~gc~~ 23 (326)
T 3tlk_A 1 MRLAPLYRNAL-LLTGLLLSGIAA 23 (326)
T ss_dssp ------------------------
T ss_pred CcchHHHHHHH-HHHHHHHhcccc
Confidence 77777666544 333455788874
No 53
>4hd5_A Polysaccharide deacetylase; TIM barrel, hydrolase; 1.90A {Bacillus cereus}
Probab=21.68 E-value=34 Score=30.46 Aligned_cols=14 Identities=14% Similarity=0.449 Sum_probs=9.9
Q ss_pred CceEEEEEeccCCC
Q 025317 133 SGLIYRDFEVGKGD 146 (254)
Q Consensus 133 ~Gl~y~i~~~G~G~ 146 (254)
..+.|++-+-++|+
T Consensus 73 ~~~~~~~~~~~~~~ 86 (360)
T 4hd5_A 73 NEVQYKIWRTADGK 86 (360)
T ss_dssp EEEEEEEEETTTCG
T ss_pred HHHHhHHhhccCCc
Confidence 45778877777774
No 54
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=20.77 E-value=1.2e+02 Score=30.34 Aligned_cols=59 Identities=19% Similarity=0.256 Sum_probs=46.6
Q ss_pred CCCCCCeEEEEEEEEEc-CCc-------------------------------EEeccccCCCCeeEecCCCCchhHHHHH
Q 025317 147 CPKDGQQVIFHYIGYNE-SGR-------------------------------RIDSTYLQGSPARIRMGTNALVPGFEEG 194 (254)
Q Consensus 147 ~~~~gd~V~v~Y~~~~~-dG~-------------------------------v~dst~~~~~p~~~~lG~~~~i~Gl~~a 194 (254)
.+..|+.|.|.|+..+. +|+ .+++ ...+.|.+|.+.+.+-++..
T Consensus 560 ~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies----~~e~~fe~g~g~~~~~le~v 635 (950)
T 3htx_A 560 SITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIES----NEEIEFEVGTGSMNPHIESE 635 (950)
T ss_dssp CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEE----EEEEEEEETTTCBCHHHHHH
T ss_pred ccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccc----cHHHHHHHhcCCccchhhhe
Confidence 46899999999999875 332 1222 24678999999999999999
Q ss_pred HccCCCccEEEEEEC
Q 025317 195 IRDMRPGGKRRIIIP 209 (254)
Q Consensus 195 L~~mk~Ge~~~i~iP 209 (254)
+..|..|+...|..-
T Consensus 636 V~qms~gqT~~F~~~ 650 (950)
T 3htx_A 636 VTQMTVGEYASFKMT 650 (950)
T ss_dssp HTTCCTTCEEEEEES
T ss_pred eeeccccceeEEecc
Confidence 999999999888743
No 55
>2a3m_A COG3005: nitrate/TMAO reductases, membrane-bound cytochrome C subunit; tetraheme cytochrome, electron transport; HET: HEM; 1.50A {Desulfovibrio desulfuricans subsp} PDB: 2a3p_A*
Probab=20.70 E-value=21 Score=26.73 Aligned_cols=8 Identities=0% Similarity=0.430 Sum_probs=0.0
Q ss_pred hhhhHHHH
Q 025317 58 LKRRVVPF 65 (254)
Q Consensus 58 Mrrr~l~~ 65 (254)
||||+++.
T Consensus 1 Mkk~~~~~ 8 (130)
T 2a3m_A 1 MRKSLFAV 8 (130)
T ss_dssp --------
T ss_pred CchhHHHH
Confidence 88877665
Done!