Your job contains 1 sequence.
>025324
MQFGCCYNYSADKDGNPPGIIRDEEVDPLPPMFKQMIKRMVRWHILPPTCIPNSCIVNIY
DEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLIL
NGNGADVAKHCVPAVPTKRISITFRKMDDSKLPYKFSPDPELMGIKAMVNSPSNKSPIEQ
NNRQKPLASYSPTTKSAFQQKNQNRNNKVPSGNTETPSRLKNNSFIIENDDFPPLGSSNS
GNRARFTRAGSRQL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025324
(254 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2060964 - symbol:AT2G17970 species:3702 "Arabi... 750 2.9e-76 2
TAIR|locus:2135124 - symbol:AT4G36090 species:3702 "Arabi... 758 3.5e-75 1
TAIR|locus:2028486 - symbol:AT1G48980 species:3702 "Arabi... 693 2.7e-68 1
TAIR|locus:2066385 - symbol:AT2G48080 species:3702 "Arabi... 238 1.5e-19 1
TAIR|locus:2139345 - symbol:AT4G02940 species:3702 "Arabi... 228 4.0e-18 1
TAIR|locus:2006717 - symbol:AT1G14710 "AT1G14710" species... 213 1.9e-16 1
UNIPROTKB|Q6P6C2 - symbol:ALKBH5 "RNA demethylase ALKBH5"... 207 2.9e-16 1
UNIPROTKB|E2RPR0 - symbol:ALKBH5 "Uncharacterized protein... 208 3.1e-16 1
UNIPROTKB|E1BH29 - symbol:ALKBH5 "RNA demethylase ALKBH5"... 201 1.3e-15 1
MGI|MGI:2144489 - symbol:Alkbh5 "alkB, alkylation repair ... 200 1.7e-15 1
RGD|1309496 - symbol:Alkbh5 "alkB, alkylation repair homo... 200 1.7e-15 1
UNIPROTKB|Q66JG8 - symbol:alkbh5 "RNA demethylase ALKBH5"... 192 9.7e-15 1
UNIPROTKB|F1NIA5 - symbol:ALKBH5 "Uncharacterized protein... 190 1.9e-14 1
UNIPROTKB|Q6GPB5 - symbol:alkbh5 "RNA demethylase ALKBH5"... 189 2.1e-14 1
ZFIN|ZDB-GENE-061013-602 - symbol:alkbh5 "alkB, alkylatio... 187 3.3e-14 1
UNIPROTKB|I3LGP5 - symbol:ALKBH5 "Uncharacterized protein... 139 3.7e-07 1
>TAIR|locus:2060964 [details] [associations]
symbol:AT2G17970 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR005123 Pfam:PF03171
PROSITE:PS51471 GO:GO:0009506 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016706 EMBL:AC006201
HOGENOM:HOG000015189 EMBL:BT010563 EMBL:AK175991 IPI:IPI00529507
PIR:F84558 PIR:T00828 RefSeq:NP_179387.1 UniGene:At.40074
ProteinModelPortal:Q9SL49 PRIDE:Q9SL49 ProMEX:Q9SL49
EnsemblPlants:AT2G17970.1 GeneID:816307 KEGG:ath:AT2G17970
TAIR:At2g17970 InParanoid:Q9SL49 OMA:NPERSSE PhylomeDB:Q9SL49
ProtClustDB:CLSN2683920 ArrayExpress:Q9SL49 Genevestigator:Q9SL49
Uniprot:Q9SL49
Length = 507
Score = 750 (269.1 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 126/168 (75%), Positives = 155/168 (92%)
Query: 1 MQFGCCYNYSADKDGNPPGIIRDEEVDPLPPMFKQMIKRMVRWHILPPTCIPNSCIVNIY 60
+QFGCCYNY+ D+ GNPPGI++ EEVDPLP +FK +I+++++WH+LPPTC+P+SCIVNIY
Sbjct: 267 IQFGCCYNYAPDRAGNPPGILQREEVDPLPHLFKVIIRKLIKWHVLPPTCVPDSCIVNIY 326
Query: 61 DEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLIL 120
DEGDCIPPHID+HDFLRPFCT+SFL+EC+ILFGS+LK+ GPG+FSG SIPLPVGSVL+L
Sbjct: 327 DEGDCIPPHIDNHDFLRPFCTISFLSECDILFGSNLKVEGPGDFSGSYSIPLPVGSVLVL 386
Query: 121 NGNGADVAKHCVPAVPTKRISITFRKMDDSKLPYKFSPDPELMGIKAM 168
NGNGADVAKHCVPAVPTKRISITFRKMD+SK P F+P+P+L GI+ +
Sbjct: 387 NGNGADVAKHCVPAVPTKRISITFRKMDESKRPVWFTPEPDLQGIEPL 434
Score = 37 (18.1 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 234 PLGSSNSGNRARFTR 248
PL + SG+ +RF+R
Sbjct: 435 PLDLNRSGSTSRFSR 449
>TAIR|locus:2135124 [details] [associations]
symbol:AT4G36090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005123
PROSITE:PS51471 EMBL:CP002687 GO:GO:0016706 Pfam:PF13532
EMBL:BT020221 EMBL:BT021118 IPI:IPI00657386 RefSeq:NP_001031794.1
UniGene:At.50399 ProteinModelPortal:Q5RJC7 PRIDE:Q5RJC7
EnsemblPlants:AT4G36090.3 GeneID:829765 KEGG:ath:AT4G36090
TAIR:At4g36090 HOGENOM:HOG000015189 InParanoid:Q5RJC7
PhylomeDB:Q5RJC7 ProtClustDB:CLSN2681466 Genevestigator:Q5RJC7
Uniprot:Q5RJC7
Length = 520
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 136/212 (64%), Positives = 166/212 (78%)
Query: 1 MQFGCCYNYSADKDGNPPGIIRDEEVDPLPPMFKQMIKRMVRWHILPPTCIPNSCIVNIY 60
+QFGCCYNY+ DK GNPPGI++ +VDP+P +FK +IKR+V WH+LPPTC+P+SCIVNIY
Sbjct: 271 IQFGCCYNYAPDKAGNPPGILQRGDVDPMPSIFKVIIKRLVGWHVLPPTCVPDSCIVNIY 330
Query: 61 DEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLIL 120
+E DCIPPHID+HDFLRPFCTVSFL+ECNILFGS+LK++GPGEFSG SIPLPVGSVL+L
Sbjct: 331 EEDDCIPPHIDNHDFLRPFCTVSFLSECNILFGSNLKVLGPGEFSGSYSIPLPVGSVLVL 390
Query: 121 NGNGADVAKHCVPAVPTKRISITFRKMDDSKLPYKFSPDPELMGIKAMVNSPSNKSPIEQ 180
GNGADVAKHCVPAVPTKRISITFRKMD+SK P F+P+P+L IK + P E
Sbjct: 391 KGNGADVAKHCVPAVPTKRISITFRKMDESKRPVGFTPEPDLEEIKPL--------PYEH 442
Query: 181 NNRQKPLASYSPTTKSAFQQKNQNRNNKVPSG 212
P + +++S+ Q N NN+ G
Sbjct: 443 TTPSTPADAVISSSRSSIDQNGSNHNNRTAHG 474
>TAIR|locus:2028486 [details] [associations]
symbol:AT1G48980 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR005123 PROSITE:PS51471 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0016706 Pfam:PF13532
HOGENOM:HOG000015189 EMBL:AY735531 EMBL:AY924702 IPI:IPI00526630
RefSeq:NP_175328.2 UniGene:At.50945 ProteinModelPortal:Q5XVJ1
EnsemblPlants:AT1G48980.1 GeneID:841320 KEGG:ath:AT1G48980
TAIR:At1g48980 InParanoid:Q5XVJ1 OMA:GILKHET PhylomeDB:Q5XVJ1
ProtClustDB:CLSN2681398 Genevestigator:Q5XVJ1 Uniprot:Q5XVJ1
Length = 331
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 120/169 (71%), Positives = 145/169 (85%)
Query: 1 MQFGCCYNYSADKDGNPPGIIRDEEVDPLPPMFKQMIKRMVRWHILPPTCIPNSCIVNIY 60
+QFGCC+NY K GN GI++ E VDPLP +FK +I+R+V+WH+LPPTC+P+ C+VNIY
Sbjct: 149 IQFGCCFNYRTSKTGNLAGILKHETVDPLPHLFKVIIRRLVKWHVLPPTCVPDCCVVNIY 208
Query: 61 DEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSG-PISIPLPVGSVLI 119
DEGDCIPPHIDHHDFLRPFCTVSFL+ECNILFGS+LK+ GE+SG S+PLPVGSVL+
Sbjct: 209 DEGDCIPPHIDHHDFLRPFCTVSFLSECNILFGSNLKVEETGEYSGGSYSLPLPVGSVLV 268
Query: 120 LNGNGADVAKHCVPAVPTKRISITFRKMDDSKLPYKFSPDPELMGIKAM 168
LNGNGADVAKHCVP VPTKRISITFRKMD+SK P ++P+P L GI+ +
Sbjct: 269 LNGNGADVAKHCVPEVPTKRISITFRKMDESKWPVWYTPEPYLQGIQPL 317
>TAIR|locus:2066385 [details] [associations]
symbol:AT2G48080 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005123 Pfam:PF03171
EMBL:CP002685 GO:GO:0016706 IPI:IPI00540530 RefSeq:NP_182329.2
UniGene:At.43581 ProteinModelPortal:F4IN63 PRIDE:F4IN63
EnsemblPlants:AT2G48080.1 GeneID:819420 KEGG:ath:AT2G48080
OMA:VMCPSPN ArrayExpress:F4IN63 Uniprot:F4IN63
Length = 438
Score = 238 (88.8 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 53/151 (35%), Positives = 86/151 (56%)
Query: 19 GIIRDEE-VDPLPPMFKQMIKRMVRWHILPPTCIPNSCIVNIYDEGDCI-----PPHIDH 72
G DE V+P+P + + +I +++W ++P PN C++N +DE + PPH+D
Sbjct: 227 GNTTDEHSVEPIPTLVQSVIDHLLQWRLIPEYKRPNGCVINFFDEDEHSQPFQKPPHVD- 285
Query: 73 HDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVAKHCV 132
+P T+ L+E ++FG L + G F G +++PL GS+L++ GN AD+A+H +
Sbjct: 286 ----QPISTL-VLSESTMVFGHRLGVDNDGNFRGSLTLPLKEGSLLVMRGNSADMARHVM 340
Query: 133 PAVPTKRISITFRKMD-DSKLPYKFSPDPEL 162
P KR++ITF K+ DS K P P L
Sbjct: 341 CPSPNKRVAITFFKLKPDSG---KVQPPPTL 368
>TAIR|locus:2139345 [details] [associations]
symbol:AT4G02940 species:3702 "Arabidopsis thaliana"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0080167 "response to karrikin" evidence=IEP]
InterPro:IPR005123 Pfam:PF03171 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0080167 EMBL:AF069442 EMBL:AL161495
GO:GO:0016706 EMBL:AY093043 EMBL:AY128924 IPI:IPI00523972
PIR:T01399 RefSeq:NP_192203.1 UniGene:At.20270
ProteinModelPortal:Q9ZT92 IntAct:Q9ZT92 STRING:Q9ZT92 PaxDb:Q9ZT92
PRIDE:Q9ZT92 EnsemblPlants:AT4G02940.1 GeneID:828132
KEGG:ath:AT4G02940 TAIR:At4g02940 eggNOG:NOG294942
HOGENOM:HOG000077461 InParanoid:Q9ZT92 OMA:SESTMAY PhylomeDB:Q9ZT92
ProtClustDB:CLSN2685922 Genevestigator:Q9ZT92 Uniprot:Q9ZT92
Length = 569
Score = 228 (85.3 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 47/159 (29%), Positives = 82/159 (51%)
Query: 11 ADKDGNPPGIIRDEEVDPLPPMFKQMIKRMVRWHILPPTCIPNSCIVNIYDEGDCIPPHI 70
AD++ N ++P+PP+ + +I V W ++P PN C++N ++EG+ P +
Sbjct: 305 ADENSNDTN--NSVNIEPIPPLLESVIDHFVTWRLIPEYKRPNGCVINFFEEGEYSQPFL 362
Query: 71 DHHDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVAKH 130
+P T+ L+E + +G L G F GP+++ L GS+L++ GN AD+A+H
Sbjct: 363 KPPHLEQPISTL-VLSESTMAYGRILSSDNEGNFRGPLTLSLKQGSLLVMRGNSADMARH 421
Query: 131 CVPAVPTKRISITFRKMDDSKLPYKFSPD-PELMGIKAM 168
+ KR+SITF ++ P+ P G+ M
Sbjct: 422 VMCPSQNKRVSITFFRIRPDTYHNHSQPNSPRNDGVMTM 460
>TAIR|locus:2006717 [details] [associations]
symbol:AT1G14710 "AT1G14710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR005123
EMBL:CP002684 GO:GO:0005829 GO:GO:0016706 Pfam:PF13532
IPI:IPI01019363 RefSeq:NP_563957.1 RefSeq:NP_849663.1
UniGene:At.21234 UniGene:At.67634 ProteinModelPortal:F4HWB0
PRIDE:F4HWB0 EnsemblPlants:AT1G14710.1 EnsemblPlants:AT1G14710.2
GeneID:838036 KEGG:ath:AT1G14710 OMA:DACIIDF Uniprot:F4HWB0
Length = 601
Score = 213 (80.0 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 44/126 (34%), Positives = 74/126 (58%)
Query: 21 IRDEEVDPLPPMFKQMIKRMVRWHILPPTCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFC 80
I+D ++P+P +I+R+V I+P P++CI++ + EGD PH+ F RP
Sbjct: 328 IKDRRIEPIPSALSDIIERLVSKQIIPVK--PDACIIDFFSEGDHSQPHMFVPWFGRPIS 385
Query: 81 TVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVAKHCVPAVPTKRI 140
+S L+EC+ FG + PG++ G + + L GSVL++ G A++AK+ + A +RI
Sbjct: 386 VLS-LSECDYTFGRVIVSENPGDYKGSLKLSLTPGSVLLVEGKSANLAKYAIHATRKQRI 444
Query: 141 SITFRK 146
I+F K
Sbjct: 445 LISFIK 450
>UNIPROTKB|Q6P6C2 [details] [associations]
symbol:ALKBH5 "RNA demethylase ALKBH5" species:9606 "Homo
sapiens" [GO:0016702 "oxidoreductase activity, acting on single
donors with incorporation of molecular oxygen, incorporation of two
atoms of oxygen" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0035515 "oxidative RNA demethylase activity" evidence=IDA]
[GO:0035553 "oxidative single-stranded RNA demethylation"
evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0006406
"mRNA export from nucleus" evidence=IMP] [GO:0006397 "mRNA
processing" evidence=IMP] [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IDA] [GO:0007283 "spermatogenesis" evidence=ISS]
InterPro:IPR005123 GO:GO:0046872 GO:GO:0016706 GO:GO:0016702
Pfam:PF13532 CTD:54890 KO:K10767 eggNOG:NOG264303
HOGENOM:HOG000007505 HOVERGEN:HBG080833 EMBL:AK000315 EMBL:AK301107
EMBL:AC087164 EMBL:AC109515 EMBL:CH471196 EMBL:BC062339
IPI:IPI00413659 IPI:IPI00759562 RefSeq:NP_060228.3
UniGene:Hs.740458 ProteinModelPortal:Q6P6C2 IntAct:Q6P6C2
STRING:Q6P6C2 PhosphoSite:Q6P6C2 DMDM:74749138 PaxDb:Q6P6C2
PRIDE:Q6P6C2 Ensembl:ENST00000399138 GeneID:54890 KEGG:hsa:54890
UCSC:uc010cpw.3 GeneCards:GC17P018086 HGNC:HGNC:25996 HPA:HPA007196
MIM:613303 neXtProt:NX_Q6P6C2 PharmGKB:PA142671230
InParanoid:Q6P6C2 GenomeRNAi:54890 NextBio:57883
ArrayExpress:Q6P6C2 Bgee:Q6P6C2 CleanEx:HS_ALKBH5
Genevestigator:Q6P6C2 GermOnline:ENSG00000091542 Uniprot:Q6P6C2
Length = 394
Score = 207 (77.9 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 72/240 (30%), Positives = 110/240 (45%)
Query: 3 FGCCYNYSADKDGNPPGIIR---DEEVDPLPPMFKQM-IKRMVRWHILPPTCIPNSCIVN 58
FG Y Y A PG R +VD +P Q+ I+++V ++P + NS ++N
Sbjct: 135 FGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFV-NSAVIN 193
Query: 59 IYDEGDCIPPHIDH-HDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPI-SIPLPVGS 116
Y G CI H+D H F RP +VSF ++ + FG + P S P+ S+P+ GS
Sbjct: 194 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFK-PIRVSEPVLSLPVRRGS 252
Query: 117 VLILNGNGADVAKHCV-PA-VPTKRISITFRKMDDSKLPYKFSPDPELMGIKAMVNSPSN 174
V +L+G AD HC+ P + +R I RK ++L +P E + + V PS
Sbjct: 253 VTVLSGYAADEITHCIRPQDIKERRAVIILRK---TRLD---APRLETKSLSSSVLPPSY 306
Query: 175 KSP-IEQNNRQ---KPLASYSPTTKSAFQQKNQNRNNKVPSGNTET-PSRLKNNSFIIEN 229
S + NNR KP S+ A + +K + + P+ + SF EN
Sbjct: 307 ASDRLSGNNRDPALKPKRSHRKADPDAAHRPRILEMDKEENRRSVLLPTHRRRGSFSSEN 366
>UNIPROTKB|E2RPR0 [details] [associations]
symbol:ALKBH5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR005123
GO:GO:0016706 Pfam:PF13532 GeneTree:ENSGT00390000009298 OMA:GAKRKYQ
EMBL:AAEX03003715 Ensembl:ENSCAFT00000029091 NextBio:20894983
Uniprot:E2RPR0
Length = 434
Score = 208 (78.3 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 72/240 (30%), Positives = 111/240 (46%)
Query: 3 FGCCYNYSADKDGNPPGIIR---DEEVDPLPPMFKQM-IKRMVRWHILPPTCIPNSCIVN 58
FG Y Y A PG R +VD +P Q+ I+++V ++P + NS ++N
Sbjct: 135 FGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFV-NSAVIN 193
Query: 59 IYDEGDCIPPHIDH-HDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPI-SIPLPVGS 116
Y G CI H+D H F RP +VSF ++ + FG + P S P+ S+P+ GS
Sbjct: 194 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFK-PIRVSEPVLSLPVRRGS 252
Query: 117 VLILNGNGADVAKHCV-PA-VPTKRISITFRKMDDSKLPYKFSPDPELMGIKAMVNSPSN 174
V +L+G AD HC+ P + +R I RK ++L +P E + + V PS
Sbjct: 253 VTVLSGYAADEITHCIRPQDIKERRAVIILRK---TRLD---APRLETKSLSSSVLPPSY 306
Query: 175 KSP-IEQNNRQ---KPLASYSPTTKSAFQQKNQNRNNKVPSGNTET-PSRLKNNSFIIEN 229
S + NNR KP S+ A + +K + + P+ + +SF EN
Sbjct: 307 ASDRLSGNNRDPALKPKRSHRKADPDAAHRPRILEMDKEENRRSVLLPTHRRRSSFSSEN 366
>UNIPROTKB|E1BH29 [details] [associations]
symbol:ALKBH5 "RNA demethylase ALKBH5" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=ISS] [GO:0016607
"nuclear speck" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035515 "oxidative RNA demethylase activity" evidence=ISS]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=ISS] [GO:0035553 "oxidative single-stranded RNA
demethylation" evidence=ISS] [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0006397 "mRNA processing" evidence=ISS]
[GO:0001666 "response to hypoxia" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] InterPro:IPR005123
GO:GO:0016706 Pfam:PF13532 EMBL:DAAA02048990 IPI:IPI00707099
RefSeq:NP_001192446.1 UniGene:Bt.6937 ProteinModelPortal:E1BH29
Ensembl:ENSBTAT00000034976 GeneID:533303 KEGG:bta:533303 CTD:54890
GeneTree:ENSGT00390000009298 KO:K10767 OMA:GAKRKYQ NextBio:20875992
Uniprot:E1BH29
Length = 394
Score = 201 (75.8 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 63/194 (32%), Positives = 94/194 (48%)
Query: 3 FGCCYNYSADKDGNPPGIIR---DEEVDPLPPMFKQM-IKRMVRWHILPPTCIPNSCIVN 58
FG Y Y A PG R +VD +P Q+ I+++V ++P + NS ++N
Sbjct: 135 FGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFV-NSAVIN 193
Query: 59 IYDEGDCIPPHIDH-HDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPI-SIPLPVGS 116
Y G CI H+D H F RP +VSF ++ + FG + P S P+ S+P+ GS
Sbjct: 194 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFK-PIRVSEPVLSLPVRRGS 252
Query: 117 VLILNGNGADVAKHCV-PA-VPTKRISITFRKMDDSKLPYKFSPDPELMGIKAMVNSPSN 174
V +L+G AD HC+ P + +R I RK ++L +P E + + V PS
Sbjct: 253 VTVLSGYAADEITHCIRPQDIKERRAVIILRK---TRLD---APRLETKSLSSSVLPPSY 306
Query: 175 KSP-IEQNNRQKPL 187
S + NNR L
Sbjct: 307 ASDRLSGNNRDPAL 320
>MGI|MGI:2144489 [details] [associations]
symbol:Alkbh5 "alkB, alkylation repair homolog 5 (E. coli)"
species:10090 "Mus musculus" [GO:0001666 "response to hypoxia"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA
processing" evidence=ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=ISO] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0035515 "oxidative RNA demethylase activity"
evidence=ISO] [GO:0035553 "oxidative single-stranded RNA
demethylation" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR005123 MGI:MGI:2144489 GO:GO:0046872
GO:GO:0016706 GO:GO:0016702 Pfam:PF13532 CTD:54890
GeneTree:ENSGT00390000009298 KO:K10767 OMA:GAKRKYQ eggNOG:NOG264303
HOGENOM:HOG000007505 HOVERGEN:HBG080833 OrthoDB:EOG45B1FW
EMBL:AK053695 EMBL:AK053700 EMBL:AK162072 EMBL:AK163294
EMBL:AL596386 EMBL:BC052076 IPI:IPI00453512 RefSeq:NP_766531.2
UniGene:Mm.262056 ProteinModelPortal:Q3TSG4 PhosphoSite:Q3TSG4
PaxDb:Q3TSG4 PRIDE:Q3TSG4 Ensembl:ENSMUST00000044250 GeneID:268420
KEGG:mmu:268420 UCSC:uc007jgd.2 InParanoid:Q3TSG4 NextBio:392283
Bgee:Q3TSG4 CleanEx:MM_ALKBH5 Genevestigator:Q3TSG4
GermOnline:ENSMUSG00000042650 Uniprot:Q3TSG4
Length = 395
Score = 200 (75.5 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 72/243 (29%), Positives = 111/243 (45%)
Query: 3 FGCCYNYSADKDGNPPGIIR---DEEVDPLPPMFKQM-IKRMVRWHILPPTCIPNSCIVN 58
FG Y Y A PG R +VD +P Q+ I+++V ++P + NS ++N
Sbjct: 136 FGEGYTYGAQLQKRGPGQERLYPPGDVDEIPDWVHQLVIQKLVEHRVIPEGFV-NSAVIN 194
Query: 59 IYDEGDCIPPHIDH-HDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPI-SIPLPVGS 116
Y G CI H+D H F RP +VSF ++ + FG + P S P+ S+P+ GS
Sbjct: 195 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFK-PIRVSEPVLSLPVRRGS 253
Query: 117 VLILNGNGADVAKHCV-PA-VPTKRISITFRK--MDDSKLPYK-FSPD---PELMGIKAM 168
V +L+G AD HC+ P + +R I RK +D +L K S P +
Sbjct: 254 VTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRLETKSLSSSTLPPSYASDRLS 313
Query: 169 VNS--PSNKSPIEQNNRQKPLASYSPTTKSAFQQKNQNRNNKVPSGNTETPSRLKNNSFI 226
N+ P+ K P + + P A++ P K +NR + + P+ + SF
Sbjct: 314 GNTRDPALK-PKRSHRKADPDAAHRPRILE--MDKEENRRSVL------LPTHRRRGSFS 364
Query: 227 IEN 229
EN
Sbjct: 365 SEN 367
>RGD|1309496 [details] [associations]
symbol:Alkbh5 "alkB, alkylation repair homolog 5 (E. coli)"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0006397 "mRNA processing" evidence=ISO;ISS] [GO:0006406 "mRNA
export from nucleus" evidence=ISO;ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0016607 "nuclear speck"
evidence=ISO;ISS] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0035515
"oxidative RNA demethylase activity" evidence=ISO;ISS] [GO:0035553
"oxidative single-stranded RNA demethylation" evidence=ISO;ISS]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR005123
RGD:1309496 GO:GO:0016706 Pfam:PF13532 CTD:54890
GeneTree:ENSGT00390000009298 KO:K10767 OMA:GAKRKYQ
OrthoDB:EOG45B1FW IPI:IPI00369534 RefSeq:NP_001178572.1
UniGene:Rn.8697 Ensembl:ENSRNOT00000034006 GeneID:303193
KEGG:rno:303193 UCSC:RGD:1309496 NextBio:650831 Uniprot:D3ZKD3
Length = 395
Score = 200 (75.5 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 72/243 (29%), Positives = 111/243 (45%)
Query: 3 FGCCYNYSADKDGNPPGIIR---DEEVDPLPPMFKQM-IKRMVRWHILPPTCIPNSCIVN 58
FG Y Y A PG R +VD +P Q+ I+++V ++P + NS ++N
Sbjct: 136 FGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFV-NSAVIN 194
Query: 59 IYDEGDCIPPHIDH-HDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPI-SIPLPVGS 116
Y G CI H+D H F RP +VSF ++ + FG + P S P+ S+P+ GS
Sbjct: 195 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFK-PIRVSEPVLSLPVRRGS 253
Query: 117 VLILNGNGADVAKHCV-PA-VPTKRISITFRK--MDDSKLPYK-FSPD---PELMGIKAM 168
V +L+G AD HC+ P + +R I RK +D +L K S P +
Sbjct: 254 VTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRLETKSLSSSTLPPSYASDRLS 313
Query: 169 VNS--PSNKSPIEQNNRQKPLASYSPTTKSAFQQKNQNRNNKVPSGNTETPSRLKNNSFI 226
N+ P+ K P + + P A++ P K +NR + + P+ + SF
Sbjct: 314 GNTRDPALK-PKRSHRKADPDAAHRPRILE--MDKEENRRSVL------LPTHRRRGSFS 364
Query: 227 IEN 229
EN
Sbjct: 365 SEN 367
>UNIPROTKB|Q66JG8 [details] [associations]
symbol:alkbh5 "RNA demethylase ALKBH5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006397 "mRNA
processing" evidence=ISS] [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=ISS] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=ISS] [GO:0035515 "oxidative RNA demethylase
activity" evidence=ISS] [GO:0035553 "oxidative single-stranded RNA
demethylation" evidence=ISS] InterPro:IPR005123 GO:GO:0046872
GO:GO:0016706 GO:GO:0016702 Pfam:PF13532 CTD:54890 KO:K10767
eggNOG:NOG264303 HOGENOM:HOG000007505 HOVERGEN:HBG080833
OrthoDB:EOG45B1FW EMBL:AAMC01050884 EMBL:AAMC01050885 EMBL:BC080920
RefSeq:NP_001008038.1 UniGene:Str.66664 ProteinModelPortal:Q66JG8
Ensembl:ENSXETT00000012702 Ensembl:ENSXETT00000060222 GeneID:493400
KEGG:xtr:493400 Xenbase:XB-GENE-987580 InParanoid:Q66JG8
OMA:RKFRESD Uniprot:Q66JG8
Length = 358
Score = 192 (72.6 bits), Expect = 9.7e-15, P = 9.7e-15
Identities = 66/219 (30%), Positives = 99/219 (45%)
Query: 3 FGCCYNYSADKDGNPPGIIR---DEEVDPLPPMFKQM-IKRMVRWHILPPTCIPNSCIVN 58
FG Y Y A PG R EVD +P ++ I+R+V ++P + NS ++N
Sbjct: 101 FGEGYTYGAQLQRRGPGQERLYPKGEVDEIPAWVNELVIRRLVEHRVIPEGFV-NSAVIN 159
Query: 59 IYDEGDCIPPHIDH-HDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPIS-IPLPVGS 116
Y G CI H+D H F RP +VSF ++ + FG + P S P+ +P+ GS
Sbjct: 160 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFK-PIRVSEPVFFLPVQRGS 218
Query: 117 VLILNGNGADVAKHCV-PA-VPTKRISITFRKM--DDSKLPYKF---SPDPE-LMGIKAM 168
V +L+G AD HC+ P + +R + RK + +L K S PE L G
Sbjct: 219 VTVLSGYAADEITHCIRPQDIKERRAVVILRKTRTEAPRLEMKSLSSSYQPERLQGS--- 275
Query: 169 VNSPSNKSPIEQNNRQKPLASYSPTTKSAFQQKNQNRNN 207
N P + + P A++ P K +NR +
Sbjct: 276 -NRQHILKPKRSHRKADPDAAHRPRILE--MDKEENRRS 311
>UNIPROTKB|F1NIA5 [details] [associations]
symbol:ALKBH5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR005123
GO:GO:0016706 Pfam:PF13532 GeneTree:ENSGT00390000009298 OMA:GAKRKYQ
EMBL:AADN02023711 IPI:IPI00580269 Ensembl:ENSGALT00000007980
Uniprot:F1NIA5
Length = 375
Score = 190 (71.9 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 70/242 (28%), Positives = 112/242 (46%)
Query: 3 FGCCYNYSADKDGNPPGIIR---DEEVDPLPPMFKQM-IKRMVRWHILPPTCIPNSCIVN 58
FG Y Y + PG R EVD +P + I+++V ++P + NS ++N
Sbjct: 114 FGEGYTYGSQLQRRGPGQERLYPRGEVDAIPEWVHDLVIRKLVEHRVIPEGFV-NSAVIN 172
Query: 59 IYDEGDCIPPHIDH-HDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPIS-IPLPVGS 116
Y G CI H+D H F RP +VSF ++ + FG + P S P+ +P+ GS
Sbjct: 173 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFK-PIRVSEPVLFLPVKRGS 231
Query: 117 VLILNGNGADVAKHCV-PA-VPTKRISITFRK--MDDSKLPYKFSPDPELM-GIKAMVNS 171
V +L+G AD HC+ P + +R I RK +D +L K L G + S
Sbjct: 232 VTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRLETKSLSSSVLPPGYTSDRLS 291
Query: 172 PSNKSPI---EQNNRQK-PLASYSPTTKSAFQQKNQNRNNKVPSGNTETPSRLKNNSFII 227
SN+ I ++++R+ P A++ P K +NR + + P + ++F
Sbjct: 292 GSNRDQILKPKRSHRKADPDAAHRPRILE--MDKEENRRSVL------LPKHRRRSNFSS 343
Query: 228 EN 229
EN
Sbjct: 344 EN 345
>UNIPROTKB|Q6GPB5 [details] [associations]
symbol:alkbh5 "RNA demethylase ALKBH5" species:8355
"Xenopus laevis" [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0016607 "nuclear
speck" evidence=ISS] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=ISS] [GO:0035515
"oxidative RNA demethylase activity" evidence=ISS] [GO:0035553
"oxidative single-stranded RNA demethylation" evidence=ISS]
InterPro:IPR005123 GO:GO:0046872 GO:GO:0016706 GO:GO:0016702
Pfam:PF13532 CTD:54890 KO:K10767 HOVERGEN:HBG080833 EMBL:BC073226
RefSeq:NP_001085704.1 UniGene:Xl.3522 ProteinModelPortal:Q6GPB5
GeneID:444130 KEGG:xla:444130 Xenbase:XB-GENE-987585 Uniprot:Q6GPB5
Length = 360
Score = 189 (71.6 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 67/219 (30%), Positives = 99/219 (45%)
Query: 3 FGCCYNYSADKDGNPPGIIR---DEEVDPLPPMFKQM-IKRMVRWHILPPTCIPNSCIVN 58
FG Y Y A PG R EVD +P ++ I+R+V I+P + NS ++N
Sbjct: 103 FGEGYTYGAQLQRRGPGQERLYPKGEVDEIPGWVHELVIRRLVERRIIPEGFV-NSAVIN 161
Query: 59 IYDEGDCIPPHIDH-HDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPIS-IPLPVGS 116
Y G CI H+D H F RP +VSF ++ + FG + P S P+ +P+ GS
Sbjct: 162 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFK-PIRVSEPVFFLPVRRGS 220
Query: 117 VLILNGNGADVAKHCV-PA-VPTKRISITFRKM--DDSKLPYKF---SPDPE-LMGIKAM 168
V +L+G AD HC+ P + +R + RK + +L K S PE L G
Sbjct: 221 VTVLSGYAADEITHCIRPQDIKERRAVVILRKTRTEAPRLEMKSLSSSYQPERLQGS--- 277
Query: 169 VNSPSNKSPIEQNNRQKPLASYSPTTKSAFQQKNQNRNN 207
N P + + P A++ P K +NR +
Sbjct: 278 -NRQHILKPKRSHRKADPDAAHRPRILE--MDKEENRRS 313
>ZFIN|ZDB-GENE-061013-602 [details] [associations]
symbol:alkbh5 "alkB, alkylation repair homolog 5
(E. coli)" species:7955 "Danio rerio" [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA;ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0035515 "oxidative RNA demethylase activity"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0016607 "nuclear
speck" evidence=ISS] [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0006397 "mRNA processing" evidence=ISS]
[GO:0035553 "oxidative single-stranded RNA demethylation"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] InterPro:IPR005123 ZFIN:ZDB-GENE-061013-602
GO:GO:0016706 Pfam:PF13532 CTD:54890 GeneTree:ENSGT00390000009298
KO:K10767 OMA:GAKRKYQ EMBL:AL928835 EMBL:BC124804 IPI:IPI00802177
RefSeq:NP_001070855.1 UniGene:Dr.81672 ProteinModelPortal:Q08BA6
STRING:Q08BA6 PRIDE:Q08BA6 Ensembl:ENSDART00000091683 GeneID:570158
KEGG:dre:570158 eggNOG:NOG264303 HOGENOM:HOG000007505
HOVERGEN:HBG080833 InParanoid:Q08BA6 OrthoDB:EOG45B1FW
NextBio:20890003 Bgee:Q08BA6 Uniprot:Q08BA6
Length = 352
Score = 187 (70.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 53/153 (34%), Positives = 77/153 (50%)
Query: 3 FGCCYNYSADKDGNPPG---IIRDEEVDPLPPMFKQM-IKRMVRWHILPPTCIPNSCIVN 58
FG Y Y A + PG + EVD +P ++ I R+V ++P + NS ++N
Sbjct: 103 FGEGYTYGAQLEKRGPGQERLYSKGEVDDIPDWVHELVIDRLVTHGVIPEGFV-NSAVIN 161
Query: 59 IYDEGDCIPPHIDH-HDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPV--G 115
Y G CI H+D H F RP +VSF ++ + FG + P S P+ + LPV G
Sbjct: 162 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKF-LFKPIRVSEPV-LHLPVRRG 219
Query: 116 SVLILNGNGADVAKHCV-PA-VPTKRISITFRK 146
SV +L+G AD HC+ P + +R I RK
Sbjct: 220 SVTVLSGYAADDITHCIRPQDIKERRAVIILRK 252
>UNIPROTKB|I3LGP5 [details] [associations]
symbol:ALKBH5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016706 "oxidoreductase activity, acting on paired
donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR005123
GO:GO:0016706 Pfam:PF13532 GeneTree:ENSGT00390000009298 OMA:RKFRESD
Ensembl:ENSSSCT00000024532 Uniprot:I3LGP5
Length = 327
Score = 139 (54.0 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 39/112 (34%), Positives = 58/112 (51%)
Query: 53 NSCIVNIYDEGDCIPPHIDH----HDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPI 108
+S ++N Y G CI H+ H H F RP +VSF ++ + FG + P S P+
Sbjct: 118 DSAVINDYQPGGCIVSHV-HVDPIHIFERPIVSVSFFSDSALCFGCKFQFK-PIRVSEPV 175
Query: 109 -SIPLPVGSVLILNGNGADVAKHCV-PA-VPTKRISITFRK--MDDSKLPYK 155
S+P+ GSV +L+G AD HC+ P + +R I RK +D +L K
Sbjct: 176 LSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRLETK 227
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.137 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 254 254 0.00084 114 3 11 22 0.48 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 605 (64 KB)
Total size of DFA: 203 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.19u 0.14s 29.33t Elapsed: 00:00:02
Total cpu time: 29.19u 0.14s 29.33t Elapsed: 00:00:02
Start: Fri May 10 04:04:21 2013 End: Fri May 10 04:04:23 2013