Query 025324
Match_columns 254
No_of_seqs 138 out of 1130
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 08:02:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025324.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025324hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tht_A Alkylated DNA repair pr 100.0 8.3E-31 2.8E-35 245.1 13.8 150 2-166 154-331 (345)
2 3i3q_A Alpha-ketoglutarate-dep 100.0 1.3E-28 4.5E-33 216.2 14.3 132 5-150 64-205 (211)
3 3s57_A Alpha-ketoglutarate-dep 100.0 7.2E-29 2.5E-33 216.2 10.8 130 5-148 66-203 (204)
4 2iuw_A Alkylated repair protei 100.0 3.7E-29 1.3E-33 222.5 7.5 120 27-150 104-232 (238)
5 3lfm_A Protein FTO; FAT MASS a 96.5 0.0067 2.3E-07 58.5 8.3 95 51-148 188-315 (495)
6 2rg4_A Uncharacterized protein 95.2 0.083 2.8E-06 45.5 8.9 92 51-146 101-205 (216)
7 3dkq_A PKHD-type hydroxylase S 89.4 0.28 9.6E-06 43.3 3.9 80 53-145 99-192 (243)
8 2jig_A Prolyl-4 hydroxylase; h 86.9 1.2 4E-05 37.8 6.2 117 30-147 76-216 (224)
9 2hbt_A EGL nine homolog 1; pro 80.7 3 0.0001 36.4 6.3 85 54-147 118-212 (247)
10 2opw_A Phyhd1 protein; double- 78.4 3.7 0.00013 35.5 6.1 57 106-168 226-284 (291)
11 3itq_A Prolyl 4-hydroxylase, a 75.7 4.2 0.00014 34.9 5.6 107 30-146 89-210 (216)
12 3kt7_A PKHD-type hydroxylase T 59.7 52 0.0018 32.9 10.2 104 51-159 123-239 (633)
13 3rcq_A Aspartyl/asparaginyl be 54.9 11 0.00038 32.1 4.0 82 52-150 101-185 (197)
14 1w9y_A 1-aminocyclopropane-1-c 52.6 27 0.00091 31.3 6.4 81 54-148 156-253 (319)
15 4diq_A Lysine-specific demethy 46.4 55 0.0019 31.6 7.8 86 54-147 163-264 (489)
16 2a1x_A Phytanoyl-COA dioxygena 44.3 27 0.00092 30.3 4.9 41 106-150 214-256 (308)
17 3fjs_A Uncharacterized protein 42.9 40 0.0014 24.9 5.2 68 56-144 39-106 (114)
18 3eln_A Cysteine dioxygenase ty 33.4 1.8E+02 0.0063 24.2 8.3 86 55-148 72-158 (200)
19 2rdq_A 1-deoxypentalenic acid 33.2 31 0.0011 29.4 3.5 47 107-158 210-261 (288)
20 2fct_A Syringomycin biosynthes 32.3 40 0.0014 29.2 4.1 41 106-150 218-262 (313)
21 3uss_A Putative uncharacterize 31.0 1.5E+02 0.0052 25.1 7.4 85 55-148 75-160 (211)
22 2gm6_A Cysteine dioxygenase ty 30.8 1.9E+02 0.0064 24.3 7.9 86 54-148 80-166 (208)
23 4gjz_A Lysine-specific demethy 30.3 44 0.0015 27.1 3.8 34 107-145 200-233 (235)
24 2ozj_A Cupin 2, conserved barr 27.1 1.6E+02 0.0056 20.9 6.2 53 59-128 44-96 (114)
25 3rns_A Cupin 2 conserved barre 26.5 67 0.0023 26.8 4.3 67 57-144 157-224 (227)
26 3oox_A Putative 2OG-Fe(II) oxy 25.5 44 0.0015 29.5 3.2 42 107-148 217-271 (312)
27 3emr_A ECTD; double stranded b 22.6 1.2E+02 0.004 26.7 5.4 56 107-166 229-290 (310)
28 2xdv_A MYC-induced nuclear ant 22.3 2E+02 0.0068 27.1 7.2 36 107-146 198-235 (442)
29 3gja_A CYTC3; halogenase, beta 21.2 50 0.0017 29.3 2.6 40 107-150 221-264 (319)
30 4h7l_A Uncharacterized protein 20.4 1.2E+02 0.0041 24.7 4.6 54 62-133 54-107 (157)
31 2gu9_A Tetracenomycin polyketi 20.3 2.2E+02 0.0075 19.6 8.2 61 55-134 23-84 (113)
32 1v70_A Probable antibiotics sy 20.2 1.3E+02 0.0046 20.3 4.3 59 56-134 31-89 (105)
No 1
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=99.97 E-value=8.3e-31 Score=245.05 Aligned_cols=150 Identities=22% Similarity=0.385 Sum_probs=118.5
Q ss_pred ccCceeecCCCCCCCCCCccCCCCCCCCcHHHHHHHHHHHHcccCCCCCCCCeEEEeecCCCCCCCCCCCCC-CCCCCEE
Q 025324 2 QFGCCYNYSADKDGNPPGIIRDEEVDPLPPMFKQMIKRMVRWHILPPTCIPNSCIVNIYDEGDCIPPHIDHH-DFLRPFC 80 (254)
Q Consensus 2 ~fG~~Y~Y~~~~~~~~pgi~~~~~~~piP~~L~~Li~rLv~~~ilp~~~~pn~clIN~Y~~Gd~I~pH~D~~-~f~~pIv 80 (254)
+||+.|+|++..... ....+.+||+||..|++++.+.+++ +..||+|+||+|.+|++|+||+|++ .|+++|+
T Consensus 154 ~yG~~Y~Ys~~~~~~-----~~p~p~~~P~~L~~l~~r~~~~~~~--~~~~n~~lvN~Y~~G~~I~~H~D~~~~~~~~I~ 226 (345)
T 3tht_A 154 HFGYEFHYENNNVDK-----DKPLSGGLPDICESFLEKWLRKGYI--KHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIV 226 (345)
T ss_dssp CCC-----------------------CCCHHHHHHHHHHHHHTSC--SSCCSEEEEEEECTTCCEEEECCCTTTBCSCEE
T ss_pred EECCccccccccccc-----CCCCCcCcCHHHHHHHHHHHhcccC--CCCCCEEEEEEecCCCCEeeccCCchhcCCeEE
Confidence 799999999883210 1122467999999999998876776 4589999999999999999999986 4889999
Q ss_pred EEcCCCceeEEeecccccCCCCCCCccEEEEcCCCcEEEeCCCcccccceecCC-------C------------------
Q 025324 81 TVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVAKHCVPA-------V------------------ 135 (254)
Q Consensus 81 sLSLGs~~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlVMsG~aR~~w~H~Ip~-------~------------------ 135 (254)
+||||++|+|.|+.. .+ ..++|.|++||||||+|++|+.|+|+|++ .
T Consensus 227 slSLG~~~~f~f~~~-----~~---~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 298 (345)
T 3tht_A 227 SLSLGSEIVMDFKHP-----DG---IAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTL 298 (345)
T ss_dssp EEEESSCEEEEEECT-----TS---CEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEECCSSSSCEEE
T ss_pred EEECCCceeEEEccC-----CC---ceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCcccccccccccccCCCcee
Confidence 999999999999985 11 26899999999999999999999999998 1
Q ss_pred --CCCcEEEEEecccCCCCCCCCCCCCcccCCC
Q 025324 136 --PTKRISITFRKMDDSKLPYKFSPDPELMGIK 166 (254)
Q Consensus 136 --r~~RISLTFR~~~~~~~p~~~~~~~~~~~~~ 166 (254)
++.|||||||++....|.|+|.-.||.|.-.
T Consensus 299 ~~r~~RiSlT~R~v~~~~c~C~~~~~cd~~~~~ 331 (345)
T 3tht_A 299 SKRGLRTSFTFRKVRQTPCNCSYPLVCDSQRKE 331 (345)
T ss_dssp EECCCEEEEEEECBCSSCCCCSCTTTCTTTTTT
T ss_pred ccCCCEEEEEEEecCCCCcCCCCCCcccCCCcc
Confidence 5679999999999999999999999998633
No 2
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=99.96 E-value=1.3e-28 Score=216.22 Aligned_cols=132 Identities=22% Similarity=0.346 Sum_probs=107.4
Q ss_pred ceeecCCCCCCCCCCccCCCCCCCCcHHHHHHHHHHHHcccCCCCCCCCeEEEeecCCCCCCCCCCC-CC-CCCCCEEEE
Q 025324 5 CCYNYSADKDGNPPGIIRDEEVDPLPPMFKQMIKRMVRWHILPPTCIPNSCIVNIYDEGDCIPPHID-HH-DFLRPFCTV 82 (254)
Q Consensus 5 ~~Y~Y~~~~~~~~pgi~~~~~~~piP~~L~~Li~rLv~~~ilp~~~~pn~clIN~Y~~Gd~I~pH~D-~~-~f~~pIvsL 82 (254)
..|.|+.... .....++++|++|..+++++.....+ ..+.||+|+||+|.+|++|+||+| ++ .|+.+|++|
T Consensus 64 ~~Y~Ys~~~~------~~~~pw~~~P~~L~~l~~~~~~~~g~-~~~~pn~~LvN~Y~~G~~i~~H~D~~e~~~~~pI~sv 136 (211)
T 3i3q_A 64 QGYLYSPIDP------QTNKPWPAMPQSFHNLCQRAATAAGY-PDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSV 136 (211)
T ss_dssp TEEEEESBCT------TTSSBCCCCCHHHHHHHHHHHHHTTC-TTCCCCEEEEEEECTTCCEEEECCCCCSCTTSCEEEE
T ss_pred CCcCcCCCcc------CCCCCCCchHHHHHHHHHHHHHhcCC-CCcCCCEEEEEEEcCCCCcccccCCCccccCCCEEEE
Confidence 3677776620 12345788999999999997754322 246889999999999999999999 55 488899999
Q ss_pred cCCCceeEEeecccccCCCCCCCccEEEEcCCCcEEEeCCCcccccceecCCCC--------CCcEEEEEecccCC
Q 025324 83 SFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVAKHCVPAVP--------TKRISITFRKMDDS 150 (254)
Q Consensus 83 SLGs~~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlVMsG~aR~~w~H~Ip~~r--------~~RISLTFR~~~~~ 150 (254)
|||++|+|.|++.. .. .+.++|.|++||||||+|++|+ |+|+|++.. ++|||||||++.+.
T Consensus 137 SLG~~~~f~f~~~~----~~--~~~~~i~L~~GsllvM~G~~r~-~~H~I~~~~~~~~p~~~~~RIsLTFR~~~~~ 205 (211)
T 3i3q_A 137 SLGLPAIFQFGGLK----RN--DPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGFHPLTIDCRYNLTFRQAGKK 205 (211)
T ss_dssp EEESCEEEEECCSS----TT--SCCEEEEECTTCEEEECGGGTT-CCEEECCCCCCCBTTTBTCEEEEEEECCSCC
T ss_pred ECCCCeEEEEeccc----CC--CceEEEECCCCCEEEECchHHc-eEeccCcccCCcCCCCCCCEEEEEeeeccCC
Confidence 99999999999752 11 2478999999999999999997 999999944 47999999999854
No 3
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=99.95 E-value=7.2e-29 Score=216.19 Aligned_cols=130 Identities=23% Similarity=0.348 Sum_probs=106.3
Q ss_pred ceeecCCCCCCCCCCccCCCCCCCCcHHHHHHHHHHHHcccCCCCCCCCeEEEeecCCCC-CCCCCCCCCC---CCCCEE
Q 025324 5 CCYNYSADKDGNPPGIIRDEEVDPLPPMFKQMIKRMVRWHILPPTCIPNSCIVNIYDEGD-CIPPHIDHHD---FLRPFC 80 (254)
Q Consensus 5 ~~Y~Y~~~~~~~~pgi~~~~~~~piP~~L~~Li~rLv~~~ilp~~~~pn~clIN~Y~~Gd-~I~pH~D~~~---f~~pIv 80 (254)
+.|.|+... ....+||++|..+.+++.+ ++ +..||+|+||+|.+|+ +|+||+|++. ++.+|+
T Consensus 66 ~~Y~Ysg~~----------~~~~pwp~~L~~l~~~~~~--~~--g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~Ia 131 (204)
T 3s57_A 66 LTYTFSGLT----------LSPKPWIPVLERIRDHVSG--VT--GQTFNFVLINRYKDGSDHICEHRDDERELAPGSPIA 131 (204)
T ss_dssp CCEEETTEE----------ECCEECCHHHHHHHHHHHH--HH--CCCCSEEEEEEESSTTCCEEEECCCCTTBCTTCCEE
T ss_pred CCcccCCCc----------ccCCCCCHHHHHHHHHHHH--Hh--CCCCceeEEEEECCCCCcccceecChhhccCCCcEE
Confidence 678888771 2356899999999988754 22 3489999999999997 9999999864 577999
Q ss_pred EEcCCCceeEEeecccccC-CCCCCCccEEEEcCCCcEEEeCCCcccccceecCCCC---CCcEEEEEeccc
Q 025324 81 TVSFLTECNILFGSSLKIV-GPGEFSGPISIPLPVGSVLILNGNGADVAKHCVPAVP---TKRISITFRKMD 148 (254)
Q Consensus 81 sLSLGs~~~m~Fg~~~~~~-~~~~~~~~~~l~L~~GSLlVMsG~aR~~w~H~Ip~~r---~~RISLTFR~~~ 148 (254)
+||||++|+|.|+++...+ ......+.++|.|++||||||+|++|+.|+|+||+.. +.|||||||++.
T Consensus 132 svSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTFR~i~ 203 (204)
T 3s57_A 132 SVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKIL 203 (204)
T ss_dssp EEEEESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEEECBC
T ss_pred EEECCCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEeeeec
Confidence 9999999999999863211 1111224689999999999999999999999999955 899999999874
No 4
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=99.95 E-value=3.7e-29 Score=222.51 Aligned_cols=120 Identities=21% Similarity=0.310 Sum_probs=98.4
Q ss_pred CCCcHHHHHHHHHHHHcccCCCCCCCCeEEEeecCCCC-CCCCCCCCCC-CC--CCEEEEcCCCceeEEeecccccCCCC
Q 025324 27 DPLPPMFKQMIKRMVRWHILPPTCIPNSCIVNIYDEGD-CIPPHIDHHD-FL--RPFCTVSFLTECNILFGSSLKIVGPG 102 (254)
Q Consensus 27 ~piP~~L~~Li~rLv~~~ilp~~~~pn~clIN~Y~~Gd-~I~pH~D~~~-f~--~pIvsLSLGs~~~m~Fg~~~~~~~~~ 102 (254)
++||++|..|.+++.+. . +..||+|+||+|.+|+ +|+||+|++. |+ .+|++||||++|+|.|+.+...+..+
T Consensus 104 p~wp~~l~~l~~~~~~~--~--g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IaslSLG~~~~f~f~~~~~~~~~~ 179 (238)
T 2iuw_A 104 PHWHPVLRTLKNRIEEN--T--GHTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENG 179 (238)
T ss_dssp SSCCHHHHHHHHHHHHH--H--SCCCCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECCC-----
T ss_pred CCCCHHHHHHHHHHHHH--h--CCCCCEEEEEEECCCCCceeCCcCChhhcCCCCcEEEEECCCCEEEEEeccCCccccC
Confidence 58999999998886542 2 3479999999999995 9999999975 66 79999999999999999863211111
Q ss_pred C--CCccEEEEcCCCcEEEeCCCcccccceecCCC---CCCcEEEEEecccCC
Q 025324 103 E--FSGPISIPLPVGSVLILNGNGADVAKHCVPAV---PTKRISITFRKMDDS 150 (254)
Q Consensus 103 ~--~~~~~~l~L~~GSLlVMsG~aR~~w~H~Ip~~---r~~RISLTFR~~~~~ 150 (254)
+ ..+.+.|.|++||||||.|++|+.|+|+|++. ++.|||||||++.+.
T Consensus 180 ~~~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR~v~~~ 232 (238)
T 2iuw_A 180 DYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYPD 232 (238)
T ss_dssp ---CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEECCCC-
T ss_pred cccCCceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEeeecccc
Confidence 1 12468999999999999999999999999995 899999999999755
No 5
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=96.52 E-value=0.0067 Score=58.54 Aligned_cols=95 Identities=21% Similarity=0.190 Sum_probs=65.6
Q ss_pred CCCeEEEeecCCCC---------------CCCCCCCCCCCC-CC--EEEEcCCCce---------------eEEeecccc
Q 025324 51 IPNSCIVNIYDEGD---------------CIPPHIDHHDFL-RP--FCTVSFLTEC---------------NILFGSSLK 97 (254)
Q Consensus 51 ~pn~clIN~Y~~Gd---------------~I~pH~D~~~f~-~p--IvsLSLGs~~---------------~m~Fg~~~~ 97 (254)
.+|..+||++++-+ .++||.|...-. .+ |++.|+..+. ....+-+..
T Consensus 188 ~fNvTLlN~Mdp~~m~~LKeEpyfgMGKmaVsWHhDenL~~~StVAVY~~sc~~~~~~~~~~~~~~~~d~~~W~Vglkia 267 (495)
T 3lfm_A 188 AYNVTLLNFMDPQKMPYLKEEPYFGMGKMAVSWHHDENLVDRSAVAVYSYSCEGPEEESEDDSHLEGRDPDIWHVGFKIS 267 (495)
T ss_dssp CCCEEEEEEECSSCSSSCCBCSSSCCCBEEEEEECCCSBCTTCCEEEEEEECCC-------------CCTTSEEEEEEET
T ss_pred eeehhhhhccCcccccccccccccCCcceeeeeccccccccCcceEEEEeecCCccccccccccCCCCCccceeEeeeec
Confidence 68999999998742 278999975432 24 4455554321 111111100
Q ss_pred cCCCCCCCccEEEEcCCCcEEEeCCCcccccceecCCCCCCcEEEEEeccc
Q 025324 98 IVGPGEFSGPISIPLPVGSVLILNGNGADVAKHCVPAVPTKRISITFRKMD 148 (254)
Q Consensus 98 ~~~~~~~~~~~~l~L~~GSLlVMsG~aR~~w~H~Ip~~r~~RISLTFR~~~ 148 (254)
...+ ...+.|+|+.||++.|-++-...++|||-.-...|+|=|.|...
T Consensus 268 --wDi~-tP~L~vpL~sgd~Y~Mldd~N~~HqH~VlaG~~~RfSSTHRVA~ 315 (495)
T 3lfm_A 268 --WDIE-TPGLAIPLHQGDCYFMLDDLNATHQHCVLAGSQPRFSSTHRVAE 315 (495)
T ss_dssp --TCCS-SCEEEEEECTTCEEEECTTHHHHEEEEEECCSSCEEEEEEECBC
T ss_pred --ccCC-CCceeeecCCCCeeeecchhhhhhhhhhhcCCCccccccceeee
Confidence 1111 23578999999999999999999999999988899999999765
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=95.19 E-value=0.083 Score=45.53 Aligned_cols=92 Identities=22% Similarity=0.238 Sum_probs=60.2
Q ss_pred CCCeEEEeecCCCCCCCCCCCCCCCCCCEEEEcCCC-ceeEEeeccccc-----CCCC-CC---Ccc-EEEEcCCCcEEE
Q 025324 51 IPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLT-ECNILFGSSLKI-----VGPG-EF---SGP-ISIPLPVGSVLI 119 (254)
Q Consensus 51 ~pn~clIN~Y~~Gd~I~pH~D~~~f~~pIvsLSLGs-~~~m~Fg~~~~~-----~~~~-~~---~~~-~~l~L~~GSLlV 119 (254)
....|=+|.|.+|+....|.|...+...|+=|+... ...+.|...... ...+ +. ... ..|.-..|+|+|
T Consensus 101 ~i~~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvl 180 (216)
T 2rg4_A 101 RLEDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLL 180 (216)
T ss_dssp EEEEEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEE
T ss_pred EEeeEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEE
Confidence 335678899999999999999655544555566542 345677543110 0000 00 012 478889999999
Q ss_pred eCCCcccccceecCC--CCCCcEEEEEec
Q 025324 120 LNGNGADVAKHCVPA--VPTKRISITFRK 146 (254)
Q Consensus 120 MsG~aR~~w~H~Ip~--~r~~RISLTFR~ 146 (254)
+.+. ..|+|.+ ..+.||||+|=-
T Consensus 181 FpS~----l~H~V~p~~~~~~RiSIsFN~ 205 (216)
T 2rg4_A 181 WESW----LRHEVPMNMAEEDRISVSFNY 205 (216)
T ss_dssp EETT----SCEEECCCCSSSCEEEEEEEE
T ss_pred ECCC----CEEeccCCCCCCCEEEEEEEe
Confidence 9654 3599999 445899999943
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=89.36 E-value=0.28 Score=43.31 Aligned_cols=80 Identities=25% Similarity=0.326 Sum_probs=52.2
Q ss_pred CeEEEeecCCCCCCCCCCCCCCC---C---CCEEEE-cCCCc------eeEEeecccccCCCCCCCccEEEEcCCCcEEE
Q 025324 53 NSCIVNIYDEGDCIPPHIDHHDF---L---RPFCTV-SFLTE------CNILFGSSLKIVGPGEFSGPISIPLPVGSVLI 119 (254)
Q Consensus 53 n~clIN~Y~~Gd~I~pH~D~~~f---~---~pIvsL-SLGs~------~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlV 119 (254)
....++.|.+|+...+|.|.... + ..++++ =+.++ ..+.|-.. .+...|.++.|++++
T Consensus 99 e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~---------~~~~~V~P~~G~~v~ 169 (243)
T 3dkq_A 99 YPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDT---------YGQQSIKLSAGSLVL 169 (243)
T ss_dssp EEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEET---------TEEEEECCCTTCEEE
T ss_pred ccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeC---------CCcEEEecCCCEEEE
Confidence 34789999999999999997431 1 112221 11111 11111110 124679999999999
Q ss_pred eCCCcccccceecCCC-CCCcEEEEEe
Q 025324 120 LNGNGADVAKHCVPAV-PTKRISITFR 145 (254)
Q Consensus 120 MsG~aR~~w~H~Ip~~-r~~RISLTFR 145 (254)
+... ..|++.++ ++.|+++|+.
T Consensus 170 F~s~----~lH~v~pV~~G~R~~~~~W 192 (243)
T 3dkq_A 170 YPSS----SLHQVTPVLSGERTAAFMW 192 (243)
T ss_dssp EETT----SEEEECCEEEECEEEEEEE
T ss_pred ECCC----CeEcCccccccCEEEEEEe
Confidence 9864 46999994 7899999965
No 8
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=86.87 E-value=1.2 Score=37.81 Aligned_cols=117 Identities=16% Similarity=0.183 Sum_probs=68.2
Q ss_pred cHHHHHHHHHHHHcccCCCCCCCCeEEEeecCCCCCCCCCCCCCC---------CCCCEEEEcC-CCce----eEEeecc
Q 025324 30 PPMFKQMIKRMVRWHILPPTCIPNSCIVNIYDEGDCIPPHIDHHD---------FLRPFCTVSF-LTEC----NILFGSS 95 (254)
Q Consensus 30 P~~L~~Li~rLv~~~ilp~~~~pn~clIN~Y~~Gd~I~pH~D~~~---------f~~pIvsLSL-Gs~~----~m~Fg~~ 95 (254)
.+.+..|.+++.....++.. ..+...+..|.+|+.-.+|.|... -+..++|+-| .++. ...|-..
T Consensus 76 ~~~~~~i~~ri~~~~gl~~~-~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~ 154 (224)
T 2jig_A 76 DSVISKIEKRVAQVTMIPLE-NHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNA 154 (224)
T ss_dssp SHHHHHHHHHHHHHHTCCGG-GBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTS
T ss_pred CHHHHHHHHHHHHHhCCCcc-cccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCc
Confidence 34566777776554334321 235678889999999999999521 1335555431 1111 1222110
Q ss_pred cccCCCCCC----CccEEEEcCCCcEEEeC-----CCcccccceecCCC-CCCcEEEEEecc
Q 025324 96 LKIVGPGEF----SGPISIPLPVGSVLILN-----GNGADVAKHCVPAV-PTKRISITFRKM 147 (254)
Q Consensus 96 ~~~~~~~~~----~~~~~l~L~~GSLlVMs-----G~aR~~w~H~Ip~~-r~~RISLTFR~~ 147 (254)
......... ...+.|..+.|++|++. |..-....|++.++ .+.|+++|..-.
T Consensus 155 ~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~ 216 (224)
T 2jig_A 155 EQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIH 216 (224)
T ss_dssp SSCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEE
T ss_pred ccccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEE
Confidence 000000000 12578999999999995 44445667999995 688999987643
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=80.73 E-value=3 Score=36.36 Aligned_cols=85 Identities=16% Similarity=0.140 Sum_probs=52.4
Q ss_pred eEEEeecCC-CCCCCCCCCCCCCCCCEEE-EcCCCc--------eeEEeecccccCCCCCCCccEEEEcCCCcEEEeCCC
Q 025324 54 SCIVNIYDE-GDCIPPHIDHHDFLRPFCT-VSFLTE--------CNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGN 123 (254)
Q Consensus 54 ~clIN~Y~~-Gd~I~pH~D~~~f~~pIvs-LSLGs~--------~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlVMsG~ 123 (254)
.+.+..|.+ |+...+|.|...-....++ |=...+ ..+.|-.. ......+|.-..|.++++..+
T Consensus 118 e~~~~~Y~~~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~-------~~~~~~~v~P~~grlv~F~s~ 190 (247)
T 2hbt_A 118 KAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPE-------GKAQFADIEPKFDRLLFFWSD 190 (247)
T ss_dssp CEEEEEECSSSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCT-------TCSSCEEECCBTTEEEEEECS
T ss_pred eEEEEEecCCCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecC-------CCCceEEEEcCCCEEEEEecC
Confidence 367889996 9999999998332222222 111111 11111111 001246788888999999865
Q ss_pred cccccceecCCCCCCcEEEEEecc
Q 025324 124 GADVAKHCVPAVPTKRISITFRKM 147 (254)
Q Consensus 124 aR~~w~H~Ip~~r~~RISLTFR~~ 147 (254)
.+ ..|+|.+..+.|.+||..-.
T Consensus 191 ~~--~~H~V~p~~~~R~sit~W~~ 212 (247)
T 2hbt_A 191 RR--NPHEVQPAYATRYAITVWYF 212 (247)
T ss_dssp TT--CCEEECCBSSCEEEEEEEEE
T ss_pred CC--ceeeeccCCCEEEEEEEEEc
Confidence 32 35999998899999996533
No 10
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=78.35 E-value=3.7 Score=35.46 Aligned_cols=57 Identities=21% Similarity=0.311 Sum_probs=42.2
Q ss_pred ccEEEEcCCCcEEEeCCCcccccceecCC--CCCCcEEEEEecccCCCCCCCCCCCCcccCCCcc
Q 025324 106 GPISIPLPVGSVLILNGNGADVAKHCVPA--VPTKRISITFRKMDDSKLPYKFSPDPELMGIKAM 168 (254)
Q Consensus 106 ~~~~l~L~~GSLlVMsG~aR~~w~H~Ip~--~r~~RISLTFR~~~~~~~p~~~~~~~~~~~~~~~ 168 (254)
+.+.+.++.||++++.+.. -|+-.+ ....|+++++|-+... .+.|.+..-+|....+
T Consensus 226 ~~v~~~~~aGd~~~f~~~~----~H~s~~N~s~~~R~~~~~~~~~~~--~~~~~~~~~l~~~~~~ 284 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEV----VHKSKQNLSDRSRQAYTFHLMEAS--GTTWSPENWLQPTAEL 284 (291)
T ss_dssp GCEEECBCTTCEEEEETTC----EEEECCBCSSSCCCEEEEEEEECT--TCEECTTSSCCCCSSC
T ss_pred CeeecccCCCcEEEEcCCc----eecCCCCCCCCceEEEEEEEEcCC--CCccCccccccCCCCC
Confidence 3578999999999999963 388766 3467999999988753 4566666666665444
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=75.71 E-value=4.2 Score=34.93 Aligned_cols=107 Identities=12% Similarity=0.054 Sum_probs=64.7
Q ss_pred cHHHHHHHHHHHHcccCCCCCCCCeEEEeecCCCCCCCCCCCCCC------CCCCEEEEcCCCceeEEeecccccCCCCC
Q 025324 30 PPMFKQMIKRMVRWHILPPTCIPNSCIVNIYDEGDCIPPHIDHHD------FLRPFCTVSFLTECNILFGSSLKIVGPGE 103 (254)
Q Consensus 30 P~~L~~Li~rLv~~~ilp~~~~pn~clIN~Y~~Gd~I~pH~D~~~------f~~pIvsLSLGs~~~m~Fg~~~~~~~~~~ 103 (254)
.+....|.+|+...--++.. ..+..-+..|.+|+.-.+|.|... .+..++|+-+ -+... +.-|+
T Consensus 89 ~~~v~~i~~Ri~~~~gl~~~-~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~------YLnd~---~~GGe 158 (216)
T 3itq_A 89 NELTAKIEKRISSIMNVPAS-HGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVM------YLNDV---EEGGE 158 (216)
T ss_dssp CHHHHHHHHHHHHHHTSCGG-GBCCCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEE------ECSCC---SEECC
T ss_pred cHHHHHHHHHHHHhcCceec-cccceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEE------ecccC---CcCce
Confidence 55666777776543222211 235677889999999999999632 1334544421 11110 00011
Q ss_pred ---CCccEEEEcCCCcEEEeCCC-----cccccceecCC-CCCCcEEEEEec
Q 025324 104 ---FSGPISIPLPVGSVLILNGN-----GADVAKHCVPA-VPTKRISITFRK 146 (254)
Q Consensus 104 ---~~~~~~l~L~~GSLlVMsG~-----aR~~w~H~Ip~-~r~~RISLTFR~ 146 (254)
....+.|..+.|++|++..- ......|++.+ ..+.|+++|..-
T Consensus 159 T~Fp~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~ 210 (216)
T 3itq_A 159 TFFPKLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWV 210 (216)
T ss_dssp EEETTTTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEE
T ss_pred eEecCCCCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeE
Confidence 01247899999999999752 22345799999 468999998653
No 12
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=59.70 E-value=52 Score=32.90 Aligned_cols=104 Identities=14% Similarity=0.075 Sum_probs=59.5
Q ss_pred CCCeEEEeecCCCCCCCCCCCCCCCC-CCEEEEcCCCc----------eeEEeecccccCCCCCCCccEEEEcCCCcEEE
Q 025324 51 IPNSCIVNIYDEGDCIPPHIDHHDFL-RPFCTVSFLTE----------CNILFGSSLKIVGPGEFSGPISIPLPVGSVLI 119 (254)
Q Consensus 51 ~pn~clIN~Y~~Gd~I~pH~D~~~f~-~pIvsLSLGs~----------~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlV 119 (254)
.++ +.++.|.+|+.+..|.|. ++ +.|..|=...+ ..+.+-.......+ ...-..+|.=.-|.+++
T Consensus 123 ~~D-~~~a~Y~~G~fL~~H~D~--~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P-~~d~~~~I~P~fNrLV~ 198 (633)
T 3kt7_A 123 KTD-MSINTYTKGCHLLTHDDV--IGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVP-HSDPSAKLVPQFNQIAF 198 (633)
T ss_dssp CCC-EEEEEECTTCEEEEECCC--CTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEE-CSSCSEEECCCTTEEEE
T ss_pred cee-EEEEEeCCCCeeeecCCC--CCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCC-CCCceEEEecCCCeEEE
Confidence 344 788999999999999995 22 23332221111 11211111000000 00113467777799999
Q ss_pred eCCCcccccceecCCC--CCCcEEEEEecccCCCCCCCCCCC
Q 025324 120 LNGNGADVAKHCVPAV--PTKRISITFRKMDDSKLPYKFSPD 159 (254)
Q Consensus 120 MsG~aR~~w~H~Ip~~--r~~RISLTFR~~~~~~~p~~~~~~ 159 (254)
|.-.-...| |+|.++ ...|.|||-.-..|..-.-||-|-
T Consensus 199 F~vsp~~S~-H~V~eV~~~~~RlSItGWF~~p~~~~~gy~~g 239 (633)
T 3kt7_A 199 FKVLPGFSF-HDXEEVKVDKHRLSIQGWYHIPQVGEEGYIPG 239 (633)
T ss_dssp EECCTTTCC-EEECCBCSSCCEEEEEEEEECCCTTSTTCCTT
T ss_pred EEcCCCCCc-CCCCccCCCCCEEEEEEEeccCCCcccCcCcc
Confidence 986532345 998874 678999997777666555555554
No 13
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=54.89 E-value=11 Score=32.11 Aligned_cols=82 Identities=18% Similarity=0.205 Sum_probs=56.6
Q ss_pred CCeEEEeecCCCCCCCCCCCCCC-CCCCEEEEcCCC-ceeEEeecccccCCCCCCCccEEEEcCCCcEEEeCCCcccccc
Q 025324 52 PNSCIVNIYDEGDCIPPHIDHHD-FLRPFCTVSFLT-ECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVAK 129 (254)
Q Consensus 52 pn~clIN~Y~~Gd~I~pH~D~~~-f~~pIvsLSLGs-~~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlVMsG~aR~~w~ 129 (254)
.-++.+....+|..|.+|.|... .-+.-..|-.-. .|.|..+. .....+.|.++|+... +.
T Consensus 101 ~~~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~~-------------~~~~w~eGe~~~fDds----~~ 163 (197)
T 3rcq_A 101 RGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCAN-------------ETKTWEEGKVLIFDDS----FE 163 (197)
T ss_dssp TCEEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEETT-------------EEECCCBTCEEEECTT----SC
T ss_pred cceEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEECC-------------EEEEeeCCcEEEEcCC----eE
Confidence 35788899999999999999643 222222222222 45555432 3567899999999864 55
Q ss_pred eecCC-CCCCcEEEEEecccCC
Q 025324 130 HCVPA-VPTKRISITFRKMDDS 150 (254)
Q Consensus 130 H~Ip~-~r~~RISLTFR~~~~~ 150 (254)
|.+-. ..+.||.|.+--..|.
T Consensus 164 Hev~N~~d~~RvvL~~D~~rPd 185 (197)
T 3rcq_A 164 HEVWQDASSFRLIFIVDVWHPE 185 (197)
T ss_dssp EEEEECSSSCEEEEEEEEECTT
T ss_pred EEEEECCCCCEEEEEEeeeCCC
Confidence 77765 6778999999888654
No 14
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=52.59 E-value=27 Score=31.30 Aligned_cols=81 Identities=19% Similarity=0.133 Sum_probs=49.8
Q ss_pred eEEEeecCCC------CCCCCCCCCCCCCCCEEEEcCCC--ceeEEeecccccCCCCCCCccEEEEcCCCcEEEeCCCcc
Q 025324 54 SCIVNIYDEG------DCIPPHIDHHDFLRPFCTVSFLT--ECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGA 125 (254)
Q Consensus 54 ~clIN~Y~~G------d~I~pH~D~~~f~~pIvsLSLGs--~~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlVMsG~aR 125 (254)
.+-+|.|.+- -++++|+|.. +.||=+-. ..-+...+ .+ +=+.|.-.+|+++|.-|++-
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g-----~lTlL~qd~~v~GLQV~~------~g---~Wi~V~p~pgalvVNiGD~l 221 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAG-----GIILLFQDDKVSGLQLLK------DG---QWIDVPPMRHSIVVNLGDQL 221 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSS-----SEEEEEESSSCCCEEEEE------TT---EEEECCCCTTCEEEEECHHH
T ss_pred eeEEEecCCCcccccccccccccCCC-----ceEEEEecCCCCeeeEee------CC---eEEEcccCCCcEEEEhHHHH
Confidence 4568999752 3699999963 22221110 01111111 11 13577888999999999988
Q ss_pred ccccee--------cCC-CCCCcEEEEEeccc
Q 025324 126 DVAKHC--------VPA-VPTKRISITFRKMD 148 (254)
Q Consensus 126 ~~w~H~--------Ip~-~r~~RISLTFR~~~ 148 (254)
..|+.+ |.. ....|+|+.|-...
T Consensus 222 ~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p 253 (319)
T 1w9y_A 222 EVITNGKYKSVMHRVIAQKDGARMSLASFYNP 253 (319)
T ss_dssp HHHTTTSSCCCCEEECCCSSSCCEEEEEEEEC
T ss_pred HHHhCCeeecccceecCCCCCCceEEEEEecC
Confidence 888644 432 34579999998765
No 15
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=46.38 E-value=55 Score=31.64 Aligned_cols=86 Identities=12% Similarity=0.056 Sum_probs=49.4
Q ss_pred eEEEeecC-CCC--CCCCCCCCCCCCCCEEEEcCCCceeEEeeccccc------CCCCC------CCccEEEEcCCCcEE
Q 025324 54 SCIVNIYD-EGD--CIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKI------VGPGE------FSGPISIPLPVGSVL 118 (254)
Q Consensus 54 ~clIN~Y~-~Gd--~I~pH~D~~~f~~pIvsLSLGs~~~m~Fg~~~~~------~~~~~------~~~~~~l~L~~GSLl 118 (254)
.+-+|.|- +++ ++++|.|..+ +..+=+-+...+++...... ....+ ......+.|++||+|
T Consensus 163 ~v~~N~Y~tp~Gs~g~~pH~D~~D----vFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvL 238 (489)
T 4diq_A 163 MAGSNVYLTPPNSQGFAPHYDDIE----AFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLL 238 (489)
T ss_dssp CEEEEEEEECSSBCCSCCBCCSSE----EEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEE
T ss_pred cccceEEecCCCcccccCccCCcc----eEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEE
Confidence 36789994 333 5789999853 11222222333333321110 00011 122468999999999
Q ss_pred EeCCCcccccceecCCC-CCCcEEEEEecc
Q 025324 119 ILNGNGADVAKHCVPAV-PTKRISITFRKM 147 (254)
Q Consensus 119 VMsG~aR~~w~H~Ip~~-r~~RISLTFR~~ 147 (254)
.|.-. |-|.+... .+..++|||-..
T Consensus 239 YiP~g----~~H~~~s~~~~~SlhlTi~~~ 264 (489)
T 4diq_A 239 YFPRG----FIHQAECQDGVHSLHLTLSTY 264 (489)
T ss_dssp EECTT----CEEEEEBCSSCCEEEEEEEEC
T ss_pred EECCC----CceEEEecCCCceEEEeeccc
Confidence 99965 55777764 467788887654
No 16
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=44.26 E-value=27 Score=30.31 Aligned_cols=41 Identities=10% Similarity=0.081 Sum_probs=32.5
Q ss_pred ccEEEEcCCCcEEEeCCCcccccceecCC--CCCCcEEEEEecccCC
Q 025324 106 GPISIPLPVGSVLILNGNGADVAKHCVPA--VPTKRISITFRKMDDS 150 (254)
Q Consensus 106 ~~~~l~L~~GSLlVMsG~aR~~w~H~Ip~--~r~~RISLTFR~~~~~ 150 (254)
+.+.+.++.||++++.+.. | |+-.+ ....|.+++++-....
T Consensus 214 ~~v~~~~~aGd~vlf~~~~---~-H~s~~N~s~~~R~~~~~~y~~~~ 256 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPLL---I-HGSGQNKTQGFRKAISCHFASAD 256 (308)
T ss_dssp CCEEECBCTTCEEEECTTC---C-EEECCBCSSSCEEEEEEEEEETT
T ss_pred CeEEccCCCccEEEECCCc---c-ccCCCCCCCCceEEEEEEEECCC
Confidence 4578999999999999963 3 88776 4468999999987643
No 17
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=42.95 E-value=40 Score=24.89 Aligned_cols=68 Identities=19% Similarity=0.186 Sum_probs=40.9
Q ss_pred EEeecCCCCCCCCCCCCCCCCCCEEEEcCCCceeEEeecccccCCCCCCCccEEEEcCCCcEEEeCCCcccccceecCCC
Q 025324 56 IVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVAKHCVPAV 135 (254)
Q Consensus 56 lIN~Y~~Gd~I~pH~D~~~f~~pIvsLSLGs~~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlVMsG~aR~~w~H~Ip~~ 135 (254)
..-.+.+|..+++|.-. ....++.++ ....+..+ .....|++||++++..... |++...
T Consensus 39 ~~~~l~~G~~~~~H~H~--~~e~~~Vl~--G~~~~~i~-------------~~~~~l~~Gd~i~ip~~~~----H~~~~~ 97 (114)
T 3fjs_A 39 MRMVLPAGKQVGSHSVA--GPSTIQCLE--GEVEIGVD-------------GAQRRLHQGDLLYLGAGAA----HDVNAI 97 (114)
T ss_dssp EEEEECTTCEEEEECCS--SCEEEEEEE--SCEEEEET-------------TEEEEECTTEEEEECTTCC----EEEEES
T ss_pred EEEEECCCCccCceeCC--CcEEEEEEE--CEEEEEEC-------------CEEEEECCCCEEEECCCCc----EEEEeC
Confidence 34466889889998543 234444443 22233321 2367899999999998855 666554
Q ss_pred CCCcEEEEE
Q 025324 136 PTKRISITF 144 (254)
Q Consensus 136 r~~RISLTF 144 (254)
...++-+++
T Consensus 98 ~~~~~~~~~ 106 (114)
T 3fjs_A 98 TNTSLLVTV 106 (114)
T ss_dssp SSEEEEEEE
T ss_pred CCcEEEEEE
Confidence 444554444
No 18
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=33.35 E-value=1.8e+02 Score=24.22 Aligned_cols=86 Identities=16% Similarity=0.114 Sum_probs=50.4
Q ss_pred EEEeecCCCCCCCCCCCCC-CCCCCEEEEcCCCceeEEeecccccCCCCCCCccEEEEcCCCcEEEeCCCcccccceecC
Q 025324 55 CIVNIYDEGDCIPPHIDHH-DFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVAKHCVP 133 (254)
Q Consensus 55 clIN~Y~~Gd~I~pH~D~~-~f~~pIvsLSLGs~~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlVMsG~aR~~w~H~Ip 133 (254)
+++..+.||+..++| |+. .++ .|..| =|.-..-.|..... ........-...|.+|++..|.+... -|.|.
T Consensus 72 l~ll~W~PGq~SpiH-DH~~s~g-~i~VL-~G~l~e~~y~~~~~--~~~~l~~~~~~~l~~G~v~~~~~~~g---iH~V~ 143 (200)
T 3eln_A 72 LMILCWGEGHGSSIH-DHTDSHC-FLKLL-QGNLKETLFDWPDK--KSNEMIKKSERTLRENQCAYINDSIG---LHRVE 143 (200)
T ss_dssp EEEEEECTTCBCCEE-CCTTCEE-EEEEE-ESCEEEEEECCCCS--SCCCCCEEEEEEECTTCEEEECTTTC---EEEEE
T ss_pred EEEEEECCCCcCCCc-cCCCceE-EEEEE-eeeEEEEEeecCCC--CcccccccceEEeCCCCEEEecCCCc---EEEEE
Confidence 344578899999999 664 222 23333 25555545543210 01112223368899999999976532 58888
Q ss_pred CCCCCcEEEEEeccc
Q 025324 134 AVPTKRISITFRKMD 148 (254)
Q Consensus 134 ~~r~~RISLTFR~~~ 148 (254)
.....+.++++=-..
T Consensus 144 N~s~~~~avSlHvY~ 158 (200)
T 3eln_A 144 NVSHTEPAVSLHLYS 158 (200)
T ss_dssp CCCSSCCEEEEEEEE
T ss_pred CCCCCCCEEEEEeCC
Confidence 655456777776665
No 19
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=33.23 E-value=31 Score=29.36 Aligned_cols=47 Identities=17% Similarity=0.232 Sum_probs=33.0
Q ss_pred cEEEEcCCCcEEEeCCCcccccceecCCC-----CCCcEEEEEecccCCCCCCCCCC
Q 025324 107 PISIPLPVGSVLILNGNGADVAKHCVPAV-----PTKRISITFRKMDDSKLPYKFSP 158 (254)
Q Consensus 107 ~~~l~L~~GSLlVMsG~aR~~w~H~Ip~~-----r~~RISLTFR~~~~~~~p~~~~~ 158 (254)
.+.+.++.||++++.+.. | |+-.+. |..|+++++|-..+. .|..|.+
T Consensus 210 ~v~~~~~aGdv~lf~~~~---~-H~s~~N~s~~~R~~R~s~~~~~~~~~-~~~~~~~ 261 (288)
T 2rdq_A 210 LLHSPMEPGDILLFHAHM---C-HKSIPNLSKDPRLMRMSMDTRVQPAK-SHRGFNA 261 (288)
T ss_dssp EECCCCCTTCEEEEETTC---C-EEEECCCCCTTCCCEEEEEEEEEETT-SCCCHHH
T ss_pred eeecccCCCCEEEEeCCc---e-ecCCCCCCCCccceEEEEEEEEecCc-CCCCCCc
Confidence 367889999999999963 2 776652 234799999988763 2344443
No 20
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=32.31 E-value=40 Score=29.18 Aligned_cols=41 Identities=12% Similarity=0.190 Sum_probs=32.6
Q ss_pred ccEEEEcCCCcEEEeCCCcccccceecCCCC----CCcEEEEEecccCC
Q 025324 106 GPISIPLPVGSVLILNGNGADVAKHCVPAVP----TKRISITFRKMDDS 150 (254)
Q Consensus 106 ~~~~l~L~~GSLlVMsG~aR~~w~H~Ip~~r----~~RISLTFR~~~~~ 150 (254)
+.+.+.++.||++++.+.. -|+-.+.. ..|+++++|-+...
T Consensus 218 ~~v~~~~~aGd~v~f~~~l----~H~s~~N~~ss~~~R~a~~~~y~~~~ 262 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWSTL----MHASYPHSGESQEMRMGFASRYVPSF 262 (313)
T ss_dssp GCEEECBCTTEEEEEETTS----EEEECCBCSSSSSCEEEEEEEEEETT
T ss_pred ceeEeeeCCceEEEEeCCc----eeeCCCCCCCCCCceEEEEEEEECCC
Confidence 3578999999999999963 38877643 57999999988754
No 21
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=30.97 E-value=1.5e+02 Score=25.13 Aligned_cols=85 Identities=19% Similarity=0.164 Sum_probs=52.1
Q ss_pred EEEeecCCCCCCCCCCCCCCCCCCEEEEcCCCceeEEeecccccCCCCCCCc-cEEEEcCCCcEEEeCCCcccccceecC
Q 025324 55 CIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSG-PISIPLPVGSVLILNGNGADVAKHCVP 133 (254)
Q Consensus 55 clIN~Y~~Gd~I~pH~D~~~f~~pIvsLSLGs~~~m~Fg~~~~~~~~~~~~~-~~~l~L~~GSLlVMsG~aR~~w~H~Ip 133 (254)
+++..+.+|+..++| |+.. -.++.|==|....-.|... ..+.... .-...|..|++..|..... .-|.|.
T Consensus 75 v~~l~W~PGq~spiH-DH~s--wg~~~Vl~G~l~e~~y~~~----~~g~~~~~~~~~~l~~G~v~~~~p~~g--~IH~V~ 145 (211)
T 3uss_A 75 VVSFVWGPGQITPVH-DHRV--WGLIGMLRGAEYSQPYAFD----AGGRPHPSGARRRLEPGEVEALSPRIG--DVHQVS 145 (211)
T ss_dssp EEEEEECTTCBCCSB-CCSS--CEEEEEEESCEEEEEEEEC----TTSCEEECSCCEEECTTCEEEEBTTTB--CCEEEE
T ss_pred EEEEEECCCCcCCCC-CCCe--eEEEEeeeceEEEEEeeeC----CCCCcccccceEEecCCCEEEECCCCC--CEEEEc
Confidence 455678899999999 7652 2344443466655556543 1111000 1136799999999987643 248887
Q ss_pred CCCCCcEEEEEeccc
Q 025324 134 AVPTKRISITFRKMD 148 (254)
Q Consensus 134 ~~r~~RISLTFR~~~ 148 (254)
...+.+.++++--..
T Consensus 146 N~~~d~~avSLHvYg 160 (211)
T 3uss_A 146 NAFSDRTSISIHVYG 160 (211)
T ss_dssp ESCSSSCEEEEEEES
T ss_pred cCCCCCCEEEEEEcC
Confidence 555566777777665
No 22
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=30.75 E-value=1.9e+02 Score=24.25 Aligned_cols=86 Identities=21% Similarity=0.178 Sum_probs=51.9
Q ss_pred eEEEeecCCCCCCCCCCCCCCCCCCEEEEcCCCceeEEeecccccCCCCCC-CccEEEEcCCCcEEEeCCCcccccceec
Q 025324 54 SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIVGPGEF-SGPISIPLPVGSVLILNGNGADVAKHCV 132 (254)
Q Consensus 54 ~clIN~Y~~Gd~I~pH~D~~~f~~pIvsLSLGs~~~m~Fg~~~~~~~~~~~-~~~~~l~L~~GSLlVMsG~aR~~w~H~I 132 (254)
.+++..+.+|+..++| |+.. ..++.|==|.-..-.|... ..+.. ...-...|.+|++..|....- .-|.|
T Consensus 80 ~v~~l~w~PGq~spiH-dH~~--~~~~~VL~G~l~e~~y~~~----~~g~~l~~~~~~~l~~G~v~~~~~~~g--~iH~V 150 (208)
T 2gm6_A 80 SIVSFVWGPGQRTPIH-DHTV--WGLIGMLRGAEYSQPFVLD----GSGRPVLHGEPTRLEPGHVEAVSPTVG--DIHRV 150 (208)
T ss_dssp EEEEEEECTTCBCCSB-CCSS--CEEEEEEESCEEEEEEEEC----TTSCEEECSCCEEECTTCEEEEBTTTB--CCEEE
T ss_pred EEEEEEeCCCcccCcc-cCCc--ceEEEEecccEEEEEeecC----CCCccccccceEEeCCCCEEEECCCCC--CeEEe
Confidence 4677789999999999 6653 2344343366655556543 11110 011246799999999987422 34888
Q ss_pred CCCCCCcEEEEEeccc
Q 025324 133 PAVPTKRISITFRKMD 148 (254)
Q Consensus 133 p~~r~~RISLTFR~~~ 148 (254)
....+.+.++++--+.
T Consensus 151 ~N~~~~~~avsLHvY~ 166 (208)
T 2gm6_A 151 HNAYDDRVSISIHVYG 166 (208)
T ss_dssp EESCSSSCEEEEEEES
T ss_pred ccCCCCCcEEEEEEEc
Confidence 7544455666666554
No 23
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=30.33 E-value=44 Score=27.09 Aligned_cols=34 Identities=26% Similarity=0.307 Sum_probs=26.8
Q ss_pred cEEEEcCCCcEEEeCCCcccccceecCCCCCCcEEEEEe
Q 025324 107 PISIPLPVGSVLILNGNGADVAKHCVPAVPTKRISITFR 145 (254)
Q Consensus 107 ~~~l~L~~GSLlVMsG~aR~~w~H~Ip~~r~~RISLTFR 145 (254)
.+.+.|++||+|.+... |-|.|.... .-|||+|.
T Consensus 200 ~~~~~l~pGD~LyiP~g----W~H~V~~l~-~sisvn~w 233 (235)
T 4gjz_A 200 FLSCILSPGEILFIPVK----YWHYVRALD-LSFSVSFW 233 (235)
T ss_dssp CEEEEECTTCEEEECTT----CEEEEEESS-SEEEEEEE
T ss_pred cEEEEECCCCEEEeCCC----CcEEEEECC-CEEEEEEe
Confidence 46899999999999854 779987653 46888874
No 24
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=27.07 E-value=1.6e+02 Score=20.88 Aligned_cols=53 Identities=15% Similarity=0.178 Sum_probs=31.4
Q ss_pred ecCCCCCCCCCCCCCCCCCCEEEEcCCCceeEEeecccccCCCCCCCccEEEEcCCCcEEEeCCCccccc
Q 025324 59 IYDEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVA 128 (254)
Q Consensus 59 ~Y~~Gd~I~pH~D~~~f~~pIvsLSLGs~~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlVMsG~aR~~w 128 (254)
.+.+|..+.+|.-. ...-+..++ +...+.++ .....|.+||++++.......+
T Consensus 44 ~~~~g~~~~~H~h~--~~e~~~vl~--G~~~~~i~-------------~~~~~l~~Gd~i~i~~~~~H~~ 96 (114)
T 2ozj_A 44 SFADGESVSEEEYF--GDTLYLILQ--GEAVITFD-------------DQKIDLVPEDVLMVPAHKIHAI 96 (114)
T ss_dssp EEETTSSCCCBCCS--SCEEEEEEE--EEEEEEET-------------TEEEEECTTCEEEECTTCCBEE
T ss_pred EECCCCccccEECC--CCeEEEEEe--CEEEEEEC-------------CEEEEecCCCEEEECCCCcEEE
Confidence 35788888888532 233333333 22222221 2367799999999998876433
No 25
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=26.49 E-value=67 Score=26.77 Aligned_cols=67 Identities=15% Similarity=0.170 Sum_probs=39.3
Q ss_pred EeecCCCCCCCCCCCCCCCCCCEEEEcCCCceeEEeecccccCCCCCCCccEEEEcCCCcEEEeCCCcccccceecCC-C
Q 025324 57 VNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVAKHCVPA-V 135 (254)
Q Consensus 57 IN~Y~~Gd~I~pH~D~~~f~~pIvsLSLGs~~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlVMsG~aR~~w~H~Ip~-~ 135 (254)
+-.+++|..+.+|.-. +..-+..|+ +...+..+ .....|+.||.+++..... |++.. .
T Consensus 157 ~~~~~~G~~~~~H~H~--~~e~~~Vl~--G~~~~~i~-------------g~~~~l~~Gd~i~ip~~~~----H~~~~~~ 215 (227)
T 3rns_A 157 IMSFWKGESLDPHKAP--GDALVTVLD--GEGKYYVD-------------GKPFIVKKGESAVLPANIP----HAVEAET 215 (227)
T ss_dssp EEEECTTCEEEEECCS--SEEEEEEEE--EEEEEEET-------------TEEEEEETTEEEEECTTSC----EEEECCS
T ss_pred EEEECCCCccCCEECC--CcEEEEEEe--EEEEEEEC-------------CEEEEECCCCEEEECCCCc----EEEEeCC
Confidence 3455778888887532 333333333 22223221 2367899999999998755 65555 4
Q ss_pred CCCcEEEEE
Q 025324 136 PTKRISITF 144 (254)
Q Consensus 136 r~~RISLTF 144 (254)
..-++-+|+
T Consensus 216 ~~~~~ll~~ 224 (227)
T 3rns_A 216 ENFKMLLIL 224 (227)
T ss_dssp SCEEEEEEE
T ss_pred CCEEEEEEE
Confidence 555666654
No 26
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=25.47 E-value=44 Score=29.55 Aligned_cols=42 Identities=24% Similarity=0.158 Sum_probs=31.0
Q ss_pred cEEEEcCCCcEEEeCCCcccccc--------eecCCC-----CCCcEEEEEeccc
Q 025324 107 PISIPLPVGSVLILNGNGADVAK--------HCVPAV-----PTKRISITFRKMD 148 (254)
Q Consensus 107 ~~~l~L~~GSLlVMsG~aR~~w~--------H~Ip~~-----r~~RISLTFR~~~ 148 (254)
=+.|.-.+|+++|.-|++-..|+ |.|... ...|+|+.|-..-
T Consensus 217 W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P 271 (312)
T 3oox_A 217 WLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHF 271 (312)
T ss_dssp EEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECC
T ss_pred EEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecC
Confidence 46788889999999999888876 555432 3459999887653
No 27
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=22.57 E-value=1.2e+02 Score=26.74 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=37.4
Q ss_pred cEEEEcCCCcEEEeCCCcccccceecCC--CCCCcEEEEEecccCCCC---CC-CCCCCCcccCCC
Q 025324 107 PISIPLPVGSVLILNGNGADVAKHCVPA--VPTKRISITFRKMDDSKL---PY-KFSPDPELMGIK 166 (254)
Q Consensus 107 ~~~l~L~~GSLlVMsG~aR~~w~H~Ip~--~r~~RISLTFR~~~~~~~---p~-~~~~~~~~~~~~ 166 (254)
.+.+.++.||++++.+.. | |+-.+ ....|.+|+++-...+.. |+ +-+|.|+...-.
T Consensus 229 ~v~~~~~aGdvl~f~~~~---~-H~s~~N~S~~~R~~l~~~y~~~~~~~~~p~~~~~~rp~~~~~r 290 (310)
T 3emr_A 229 ISVPTGKAGSVTLFESNT---M-HGSTSNITPYPRNNLFMVYNSVKNRLVEPFSGGEKRPEYIAVR 290 (310)
T ss_dssp CBCCCBSTTCEEEEETTC---C-EEECCCCSSCCCCEEEEEEEEGGGCCCSCTTSCCCCCTTTSCC
T ss_pred eEEeeeCCceEEEEeCCc---e-ecCCCCCCCCCeEEEEEEEeCCcccccCcccCCCCCccceecC
Confidence 466889999999999963 3 77665 345798888887664422 22 235666655443
No 28
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=22.26 E-value=2e+02 Score=27.05 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=26.6
Q ss_pred cEEEEcCCCcEEEeCCCcccccceecCCCC--CCcEEEEEec
Q 025324 107 PISIPLPVGSVLILNGNGADVAKHCVPAVP--TKRISITFRK 146 (254)
Q Consensus 107 ~~~l~L~~GSLlVMsG~aR~~w~H~Ip~~r--~~RISLTFR~ 146 (254)
...+.|++||+|.|... |-|.+.... ..-+.||+..
T Consensus 198 ~~~~~L~pGD~LYiP~g----~~H~~~s~~~~~~SlhlT~~~ 235 (442)
T 2xdv_A 198 VHEFMLKPGDLLYFPRG----TIHQADTPAGLAHSTHVTIST 235 (442)
T ss_dssp SEEEEECTTCEEEECTT----CEEEEECCSSSCCEEEEEEEE
T ss_pred ceEEEECCCcEEEECCC----ceEEEEecCCCcceeeccccc
Confidence 46899999999999854 557776643 4567777775
No 29
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=21.15 E-value=50 Score=29.31 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=31.4
Q ss_pred cEEEEcCCCcEEEeCCCcccccceecCCCC----CCcEEEEEecccCC
Q 025324 107 PISIPLPVGSVLILNGNGADVAKHCVPAVP----TKRISITFRKMDDS 150 (254)
Q Consensus 107 ~~~l~L~~GSLlVMsG~aR~~w~H~Ip~~r----~~RISLTFR~~~~~ 150 (254)
.+.+.++.||++++.+..- |+-.+.. ..|.++++|-+...
T Consensus 221 ~v~~~~~aGd~v~f~~~~~----H~s~~N~~ts~~~R~a~~~~y~~~~ 264 (319)
T 3gja_A 221 AYPMVLKPGEAVIFWSNTM----HASLPHTGSKTDYRMGFAARYVPTQ 264 (319)
T ss_dssp CCBCCBCTTEEEEEETTSC----EEECCCCSCTTCCEEEEEEEEEETT
T ss_pred eeEeeECCCeEEEEcCCcc----ccCCCCCCCCCCcEEEEEEEEECCC
Confidence 4668899999999998743 7766643 57999999988654
No 30
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=20.44 E-value=1.2e+02 Score=24.72 Aligned_cols=54 Identities=11% Similarity=0.098 Sum_probs=36.6
Q ss_pred CCCCCCCCCCCCCCCCCEEEEcCCCceeEEeecccccCCCCCCCccEEEEcCCCcEEEeCCCcccccceecC
Q 025324 62 EGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVAKHCVP 133 (254)
Q Consensus 62 ~Gd~I~pH~D~~~f~~pIvsLSLGs~~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlVMsG~aR~~w~H~Ip 133 (254)
.+....+|.- ....+.++.|+.++...|.+.. ..+.|.+|+++++..... |.+.
T Consensus 54 ~g~~~~~H~H-~~~~E~~yVLe~~G~g~v~idg-------------e~~~l~~GD~v~IPpg~~----H~i~ 107 (157)
T 4h7l_A 54 ITKAARTHYH-REHQEIYVVLDHAAHATIELNG-------------QSYPLTKLLAISIPPLVR----HRIV 107 (157)
T ss_dssp ECSCCCCBBC-SSCEEEEEEEEECTTCEEEETT-------------EEEECCTTEEEEECTTCC----EEEE
T ss_pred CCCCccceEC-CCCcEEEEEEecCcEEEEEECC-------------EEEEeCCCCEEEECCCCe----EeeE
Confidence 3445666644 2334577788877777777633 257899999999998865 6653
No 31
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=20.33 E-value=2.2e+02 Score=19.64 Aligned_cols=61 Identities=15% Similarity=0.119 Sum_probs=35.2
Q ss_pred EEEeecCCCCCCCCCCCCCC-CCCCEEEEcCCCceeEEeecccccCCCCCCCccEEEEcCCCcEEEeCCCcccccceecC
Q 025324 55 CIVNIYDEGDCIPPHIDHHD-FLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVAKHCVP 133 (254)
Q Consensus 55 clIN~Y~~Gd~I~pH~D~~~-f~~pIvsLSLGs~~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlVMsG~aR~~w~H~Ip 133 (254)
+..-.+.+|..+++|.-.+. ..+.++.++ +...+.++ .....|.+||++++..... |.+.
T Consensus 23 ~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~--G~~~~~~~-------------~~~~~l~~Gd~~~i~~~~~----H~~~ 83 (113)
T 2gu9_A 23 AAEMVIAPGDREGGPDNRHRGADQWLFVVD--GAGEAIVD-------------GHTQALQAGSLIAIERGQA----HEIR 83 (113)
T ss_dssp EEEEEECTTCEEECCCSSSCCCEEEEEEEE--CCEEEEET-------------TEEEEECTTEEEEECTTCC----EEEE
T ss_pred EEEEEECCCCccCCcccccCCCcEEEEEEe--CEEEEEEC-------------CEEEEeCCCCEEEECCCCc----EEeE
Confidence 34446678888887732222 334444443 22223221 2357899999999998754 5555
Q ss_pred C
Q 025324 134 A 134 (254)
Q Consensus 134 ~ 134 (254)
.
T Consensus 84 ~ 84 (113)
T 2gu9_A 84 N 84 (113)
T ss_dssp C
T ss_pred c
Confidence 4
No 32
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=20.18 E-value=1.3e+02 Score=20.32 Aligned_cols=59 Identities=14% Similarity=0.124 Sum_probs=33.5
Q ss_pred EEeecCCCCCCCCCCCCCCCCCCEEEEcCCCceeEEeecccccCCCCCCCccEEEEcCCCcEEEeCCCcccccceecCC
Q 025324 56 IVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIVGPGEFSGPISIPLPVGSVLILNGNGADVAKHCVPA 134 (254)
Q Consensus 56 lIN~Y~~Gd~I~pH~D~~~f~~pIvsLSLGs~~~m~Fg~~~~~~~~~~~~~~~~l~L~~GSLlVMsG~aR~~w~H~Ip~ 134 (254)
.+-.+.+|..+++|.-. ...+.+..++ +...+.++ ...+.|.+||++++..... |.+..
T Consensus 31 ~~~~~~pg~~~~~H~H~-~~~e~~~v~~--G~~~~~~~-------------~~~~~l~~Gd~~~ip~~~~----H~~~~ 89 (105)
T 1v70_A 31 DLYALLPGQAQKVHVHE-GSDKVYYALE--GEVVVRVG-------------EEEALLAPGMAAFAPAGAP----HGVRN 89 (105)
T ss_dssp EEEEECTTCEEEEECCS-SCEEEEEEEE--SCEEEEET-------------TEEEEECTTCEEEECTTSC----EEEEC
T ss_pred EEEEECCCCcCCccCCC-CCcEEEEEEe--CEEEEEEC-------------CEEEEeCCCCEEEECCCCc----EEeEe
Confidence 34466788878887532 1122333333 22222221 2367899999999998754 55544
Done!