BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025328
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2
SV=2
Length = 410
Score = 178 bits (452), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 146/251 (58%), Gaps = 13/251 (5%)
Query: 7 CGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLGD 65
CGYNQ P G+LGLGRG+++++SQL+ G+I ++V+GHCI G+G LF GD
Sbjct: 152 CGYNQGKNNHNVPTPVNGILGLGRGKVTLLSQLKSQGVITKHVLGHCISSKGKGFLFFGD 211
Query: 66 GKVPSSGVAWTPMLQNSADLKHYI--LGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123
KVP+SGV W+PM + + KHY G + + K + +IFDSGA+Y YF +
Sbjct: 212 AKVPTSGVTWSPM---NREHKHYSPRQGTLQFNSNSKPISAAPMEVIFDSGATYTYFALQ 268
Query: 124 VYQEIVSLIMRDLIGTP---LKLAPDDKTLPICWRG--PFKALGQVTEYFKPLALSFTNR 178
Y +S++ L ++ D+ L +CW+G + + +V + F+ L+L F +
Sbjct: 269 PYHATLSVVKSTLSKECKFLTEVKEKDRALTVCWKGKDKIRTIDEVKKCFRSLSLKFADG 328
Query: 179 RNSVRLVVPPEAYLVISGRKNVCLGILNGSEAE--VGENNIIGEIFMQDKMVIYDNEKQR 236
L +PPE YL+IS +VCLGIL+GS+ + N+IG I M D+MVIYD+E+
Sbjct: 329 DKKATLEIPPEHYLIISQEGHVCLGILDGSKEHPSLAGTNLIGGITMLDQMVIYDSERSL 388
Query: 237 IGWKPEDCNTL 247
+GW C+ +
Sbjct: 389 LGWVNYQCDRI 399
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1
PE=2 SV=1
Length = 410
Score = 176 bits (446), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 147/251 (58%), Gaps = 13/251 (5%)
Query: 7 CGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLGD 65
CGY+Q P +LGL RG+++++SQL+ G+I ++V+GHCI G G LF GD
Sbjct: 152 CGYDQGKKNRNVPIPVDSILGLSRGKVTLLSQLKSQGVITKHVLGHCISSKGGGFLFFGD 211
Query: 66 GKVPSSGVAWTPMLQNSADLKHYILGPAELLY--SGKSCGLKDLTLIFDSGASYAYFTSR 123
+VP+SGV WTPM + + K+Y G L + + K+ + +IFDSGA+Y YF ++
Sbjct: 212 AQVPTSGVTWTPM---NREHKYYSPGHGTLHFDSNSKAISAAPMAVIFDSGATYTYFAAQ 268
Query: 124 VYQEIVSLIMRDLIGTP---LKLAPDDKTLPICWRGPFK--ALGQVTEYFKPLALSFTNR 178
YQ +S++ L ++ D+ L +CW+G K + +V + F+ L+L F +
Sbjct: 269 PYQATLSVVKSTLNSECKFLTEVTEKDRALTVCWKGKDKIVTIDEVKKCFRSLSLEFADG 328
Query: 179 RNSVRLVVPPEAYLVISGRKNVCLGILNGSEAE--VGENNIIGEIFMQDKMVIYDNEKQR 236
L +PPE YL+IS +VCLGIL+GS+ + N+IG I M D+MVIYD+E+
Sbjct: 329 DKKATLEIPPEHYLIISQEGHVCLGILDGSKEHLSLAGTNLIGGITMLDQMVIYDSERSL 388
Query: 237 IGWKPEDCNTL 247
+GW C+ +
Sbjct: 389 LGWVNYQCDRI 399
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana
GN=At1g65240 PE=1 SV=2
Length = 475
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 26/253 (10%)
Query: 7 CGYNQHNPGPLSPPDTA--GVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLG 64
CG +Q G L D+A GV+G G+ S++SQL G + V HC+ N +G
Sbjct: 197 CGSDQ--SGQLGNGDSAVDGVMGFGQSNTSVLSQLAATGDAKRVFSHCL-DNVKGGGIFA 253
Query: 65 DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-----KDLTLIFDSGASYAY 119
G V S V TPM+ N HY + + G S L ++ I DSG + AY
Sbjct: 254 VGVVDSPKVKTTPMVPNQM---HYNVMLMGMDVDGTSLDLPRSIVRNGGTIVDSGTTLAY 310
Query: 120 FTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRR 179
F +Y ++ I L P+KL ++T F V E F P++ F
Sbjct: 311 FPKVLYDSLIETI---LARQPVKLHIVEETFQC-----FSFSTNVDEAFPPVSFEF---E 359
Query: 180 NSVRLVVPPEAYLVISGRKNVCLGILNG--SEAEVGENNIIGEIFMQDKMVIYDNEKQRI 237
+SV+L V P YL + C G G + E E ++G++ + +K+V+YD + + I
Sbjct: 360 DSVKLTVYPHDYLFTLEEELYCFGWQAGGLTTDERSEVILLGDLVLSNKLVVYDLDNEVI 419
Query: 238 GWKPEDCNTLLSL 250
GW +C++ + +
Sbjct: 420 GWADHNCSSSIKI 432
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana
GN=At5g10080 PE=1 SV=1
Length = 528
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 20 PDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPML 79
PD G++GLG IS+ S L + GL+RN C + G ++ GD + S TP L
Sbjct: 244 PD--GLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGD--MGPSIQQSTPFL 299
Query: 80 Q-NSADLKHYILGPAELLYSGKSC-GLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLI 137
Q ++ YI+G E G SC T DSG S+ Y +Y+++ I R +
Sbjct: 300 QLDNNKYSGYIVG-VEACCIGNSCLKQTSFTTFIDSGQSFTYLPEEIYRKVALEIDRHIN 358
Query: 138 GTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR 197
T + W +++ + + L F++ N+ + P + G
Sbjct: 359 ATSKNFE------GVSWEYCYESSAEPK--VPAIKLKFSH-NNTFVIHKPLFVFQQSQGL 409
Query: 198 KNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDC 244
CL I + +G IG+ +M+ +++D E ++GW P C
Sbjct: 410 VQFCLPISPSGQEGIGS---IGQNYMRGYRMVFDRENMKLGWSPSKC 453
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1
Length = 453
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 31/249 (12%)
Query: 22 TAGVLGLGRGRISIVSQLREYGLIRNVIGHCIG--QNGRGVLFLGDGKVP-SSGVAWTPM 78
T G+LG+ RG +S +SQ+ G + +CI + G L LGD + + +TP+
Sbjct: 201 TTGLLGMNRGSLSFISQM---GFPK--FSYCISGTDDFPGFLLLGDSNFTWLTPLNYTPL 255
Query: 79 LQNSADLKHY-----------ILGPAELLYSGKSCGLKDLT----LIFDSGASYAYFTSR 123
++ S L ++ I +LL KS + D T + DSG + +
Sbjct: 256 IRISTPLPYFDRVAYTVQLTGIKVNGKLLPIPKSVLVPDHTGAGQTMVDSGTQFTFLLGP 315
Query: 124 VYQEIVSLIMRDLIGT-PLKLAPD---DKTLPICWR-GPFKALGQVTEYFKPLALSFTNR 178
VY + S + G + PD T+ +C+R P + + ++L F
Sbjct: 316 VYTALRSHFLNRTNGILTVYEDPDFVFQGTMDLCYRISPVRIRSGILHRLPTVSLVFEGA 375
Query: 179 RNSV--RLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQR 236
+V + ++ +L + C N S+ E +IG Q+ + +D ++ R
Sbjct: 376 EIAVSGQPLLYRVPHLTVGNDSVYCFTFGN-SDLMGMEAYVIGHHHQQNMWIEFDLQRSR 434
Query: 237 IGWKPEDCN 245
IG P +C+
Sbjct: 435 IGLAPVECD 443
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana
GN=At2g35615 PE=3 SV=1
Length = 447
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 41/241 (17%)
Query: 32 RISIVSQLREYGLIRNVIGHCIGQ-----NGRGVLFLGDGKVPS-----SGVAWTPMLQN 81
+S++SQL I +C+ NG V+ LG +PS SGV TP++
Sbjct: 224 HLSLISQLGSS--ISKKFSYCLSHKSATTNGTSVINLGTNSIPSSLSKDSGVVSTPLVDK 281
Query: 82 SADLKHYI------LGPAELLYSGKSCGLKDL--------TLIFDSGASYAYFTSRVYQE 127
+Y+ +G ++ Y+G S D +I DSG + + + +
Sbjct: 282 EPLTYYYLTLEAISVGKKKIPYTGSSYNPNDDGILSETSGNIIIDSGTTLTLLEAGFFDK 341
Query: 128 IVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP 187
S + + G +++ L C++ +G + + FT VRL P
Sbjct: 342 FSSAVEESVTGAK-RVSDPQGLLSHCFKSGSAEIG-----LPEITVHFTGA--DVRL-SP 392
Query: 188 PEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTL 247
A++ +S VCL ++ +E I G D +V YD E + + ++ DC+
Sbjct: 393 INAFVKLS-EDMVCLSMVPTTEVA-----IYGNFAQMDFLVGYDLETRTVSFQHMDCSAN 446
Query: 248 L 248
L
Sbjct: 447 L 447
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1
PE=1 SV=1
Length = 437
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 97/255 (38%), Gaps = 40/255 (15%)
Query: 7 CGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQL--REYGLIRNVIGHCIGQNGRGVLFLG 64
CG N G + AG++G+GRG +S+ SQL ++ IG N L LG
Sbjct: 203 CGENNQGFGQ---GNGAGLVGMGRGPLSLPSQLDVTKFSYCMTPIGSSTPSN----LLLG 255
Query: 65 D-GKVPSSGVAWTPMLQNSADLKHYIL-------GPAELLYSGKSCGLKDLT----LIFD 112
++G T ++Q+S Y + G L + L +I D
Sbjct: 256 SLANSVTAGSPNTTLIQSSQIPTFYYITLNGLSVGSTRLPIDPSAFALNSNNGTGGIIID 315
Query: 113 SGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLA 172
SG + YF + YQ + + I P+ + +C++ P P
Sbjct: 316 SGTTLTYFVNNAYQSVRQEFISQ-INLPV-VNGSSSGFDLCFQTP----------SDPSN 363
Query: 173 L---SFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVI 229
L +F + L +P E Y + +CL + + S+ +I G I Q+ +V+
Sbjct: 364 LQIPTFVMHFDGGDLELPSENYFISPSNGLICLAMGSSSQGM----SIFGNIQQQNMLVV 419
Query: 230 YDNEKQRIGWKPEDC 244
YD + + C
Sbjct: 420 YDTGNSVVSFASAQC 434
>sp|D4ANC3|PEPA_ARTBC Aspartic protease PEP1 OS=Arthroderma benhamiae (strain ATCC
MYA-4681 / CBS 112371) GN=PEP1 PE=3 SV=1
Length = 403
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 185 VVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPE 242
V P ++ +VC G L + G NI G++F++ + V++D E RIG+ P+
Sbjct: 345 AVVPGKFMNYQAVGSVCFGGLQSVGSSGGVPNIFGDVFLKSQFVVWDTEGPRIGFAPQ 402
>sp|D4D7C5|PEPA_TRIVH Aspartic endopeptidase PEP1 OS=Trichophyton verrucosum (strain HKI
0517) GN=PEP1 PE=3 SV=1
Length = 403
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 185 VVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPE 242
V P ++ +VC G L + G NI G++F++ + V++D E RIG+ P+
Sbjct: 345 AVVPGKFMNYQAVGSVCFGGLQSVGSSGGVPNIFGDVFLKSQFVVWDTEGPRIGFAPQ 402
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2
PE=1 SV=1
Length = 438
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 93/238 (39%), Gaps = 35/238 (14%)
Query: 23 AGVLGLGRGRISIVSQLREYGLIRNVIGHCI---GQNGRGVLFLGDGK--VPSSGVAWTP 77
AG++G+G G +S+ SQL +C+ G + L LG VP G T
Sbjct: 217 AGLIGMGWGPLSLPSQLG-----VGQFSYCMTSYGSSSPSTLALGSAASGVP-EGSPSTT 270
Query: 78 MLQNSADLKHYILGPAELLYSGKSCGLKDLT----------LIFDSGASYAYFTSRVYQE 127
++ +S + +Y + + G + G+ T +I DSG + Y Y
Sbjct: 271 LIHSSLNPTYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAY-N 329
Query: 128 IVSLIMRDLIGTPLKLAPDDKTLPICWRGPFK-ALGQVTEYFKPLALSFTNRRNSVRLVV 186
V+ D I P + L C++ P + QV E N L+
Sbjct: 330 AVAQAFTDQINLP-TVDESSSGLSTCFQQPSDGSTVQVPEISMQFDGGVLNLGEQNILIS 388
Query: 187 PPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDC 244
P E +CL + GS +++G +I G I Q+ V+YD + + + P C
Sbjct: 389 PAEGV--------ICLAM--GSSSQLGI-SIFGNIQQQETQVLYDLQNLAVSFVPTQC 435
>sp|P56272|PEP2B_GADMO Pepsin-2B OS=Gadus morhua PE=1 SV=1
Length = 324
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 49/252 (19%)
Query: 8 GYNQHNPGPL---SPPDTAGVLGLG------RGRISIVSQLREYGLI-RNVIGHCI---G 54
G +Q PGP +P D G+LGL G + + + L+ +++ + G
Sbjct: 102 GESQTEPGPFQAAAPFD--GILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGG 159
Query: 55 QNGRGVLFLG-DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDS 113
NG V+ G D + + W P+ K++ + + +G++ + I D+
Sbjct: 160 ANGSEVMLGGVDNSHYTGSIHWIPVTAE----KYWQVALDGITVNGQTAACEGCQAIVDT 215
Query: 114 GASYAYFTSRVYQEIVSL--IMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPL 171
G TS++ + +L IM+D+ + + +G
Sbjct: 216 G------TSKIVAPVSALANIMKDIGAS---------------ENQGEMMGNCASVQSLP 254
Query: 172 ALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGIL--NGSEAEVGENNIIGEIFMQDKMVI 229
++FT N V+ +PP AY I G + C L +G + E I G++F+++ I
Sbjct: 255 DITFT--INGVKQPLPPSAY--IEGDQAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTI 310
Query: 230 YDNEKQRIGWKP 241
YD ++G+ P
Sbjct: 311 YDRTNNKVGFAP 322
>sp|P00793|PEPA_CHICK Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1
Length = 367
Score = 38.1 bits (87), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 176 TNRRNSVRLVVPPEAYLVISGRKNVCLGILN-GSEAEVGENNIIGEIFMQDKMVIYDNEK 234
T N +P AY V++ + LG N G+ E+GE I+G++F+++ VI+D
Sbjct: 300 TFHINGHAFTLPASAY-VLNEDGSCMLGFENMGTPTELGEQWILGDVFIREYYVIFDRAN 358
Query: 235 QRIGWKP 241
++G P
Sbjct: 359 NKVGLSP 365
>sp|Q28057|PAG2_BOVIN Pregnancy-associated glycoprotein 2 OS=Bos taurus GN=PAG2 PE=2 SV=1
Length = 376
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 24 GVLGLG------RGRISIVSQLREYGLIRN-VIGHCIGQN---GRGVLFLG-DGKVPSSG 72
G+LGL I I L +G V + N G V+F G D +
Sbjct: 171 GILGLAFPAMGIEDTIPIFDNLWSHGAFSEPVFAFYLNTNKPEGSVVMFGGVDHRYYKGE 230
Query: 73 VAWTPMLQNSADLKHYILGPAELLYSGK----SCGLKDLTLIFDSGASYAYFTSRVYQEI 128
+ W P+ Q S H+ + + +G SCG + L D+G S Y +++ I
Sbjct: 231 LNWIPVSQTS----HWQISMNNISMNGTVTACSCGCEAL---LDTGTSMIYGPTKLVTNI 283
Query: 129 VSLIMRDLIGTPLKLAPDD-KTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP 187
L+ L + ++ D KTLP P+ + N + +
Sbjct: 284 HKLMNARLENSEYVVSCDAVKTLP------------------PVIFNI----NGIDYPLR 321
Query: 188 PEAYLVISGRKNVCLGILNGSEAEVGENN-IIGEIFMQDKMVIYDNEKQRIGWKP 241
P+AY++ +N C + G N I+G+IF++ ++D + +RIG P
Sbjct: 322 PQAYII--KIQNSCRSVFQGGTENSSLNTWILGDIFLRQYFSVFDRKNRRIGLAP 374
>sp|Q29078|PAG1_PIG Pregnancy-associated glycoprotein 1 OS=Sus scrofa PE=2 SV=1
Length = 389
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 87/231 (37%), Gaps = 39/231 (16%)
Query: 24 GVLGLG------RGRISIVSQLREYGLI-RNVIGHCIGQNGR--GVLFLG--DGKVPSSG 72
GVLGLG +G + LR+ G I V + N + VL +G D +
Sbjct: 181 GVLGLGYPSLAIQGTTPVFDNLRKQGQIPEPVFALYLSTNTKKGSVLMIGGVDNNFFTGN 240
Query: 73 VAWTPMLQNSADLKHYILGPAELLYSGKSCG-LKDLTLIFDSGASYAYFTSRVYQEIVSL 131
+ W P+ + ++ + + + G G + I DSG+++ SR I +
Sbjct: 241 LKWVPL----SARNYWQITLDRITWRGVVVGCTRGCQAILDSGSAFLLGPSRQISSIQKI 296
Query: 132 IMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAY 191
I I ++ + C R F N+V+ VP AY
Sbjct: 297 IQARFI-------ENEYQVRCCARTTLA--------------DFIFTINNVQYPVPARAY 335
Query: 192 LVISGRKNVCLGILNGSEAEVG--ENNIIGEIFMQDKMVIYDNEKQRIGWK 240
+ C +G +G E I+GE+F++ ++D + RIG +
Sbjct: 336 IRKGSTPRRCYSNFSGGTESLGKEETWILGEVFLRLYFTVFDRGQNRIGLR 386
>sp|P27677|PEPA2_MACFU Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1
Length = 388
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 180 NSVRLVVPPEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRI 237
N ++ VPP AY++ S + C+ G + E GE I+G++F++ ++D ++
Sbjct: 325 NGIQYPVPPSAYILQS--QGSCISGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQV 382
Query: 238 GWKP 241
G P
Sbjct: 383 GLAP 386
>sp|Q28755|PAG1_SHEEP Pregnancy-associated glycoprotein 1 OS=Ovis aries PE=2 SV=1
Length = 382
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 136 LIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLAL-----SFTNRRNSVRLVVPPEA 190
L+GT L +T+ + A Q EYF + S N + VPP+A
Sbjct: 270 LVGTGTSLILGPRTVVENIQKHIGATQQCFEYFVSCSAVYALPSIVFTINGINYPVPPQA 329
Query: 191 YLVISGRKNVCLGILNGSEAE-VGENNIIGEIFMQDKMVIYDNEKQRIG 238
YLV R C + A EN I+G++F++ ++D RIG
Sbjct: 330 YLVKDSRGQ-CYSPFQVNRANPSAENWILGDVFLRRYFSVFDRGNDRIG 377
>sp|O93885|PEPA_EMENI Aspartic protease pep1 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pep1 PE=3
SV=1
Length = 386
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 174 SFTNRRNSVRLVVPPE--AYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYD 231
SFT N VVP E Y ++ + C G + ++ +I+G++F++ + V++D
Sbjct: 317 SFTVTINGYDAVVPGEHIKYAPVTDGSSTCFGGIQDNQGL--PFSILGDVFLKSQYVVFD 374
Query: 232 NEKQRIGWKPE 242
+E ++G+ P+
Sbjct: 375 SEGPQLGFAPQ 385
>sp|P0DJD8|PEPA3_HUMAN Pepsin A-3 OS=Homo sapiens GN=PGA3 PE=1 SV=1
Length = 388
Score = 35.4 bits (80), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 180 NSVRLVVPPEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRI 237
N V+ VPP AY++ S + C+ G E GE I+G++F++ ++D ++
Sbjct: 325 NGVQYPVPPSAYILQS--EGSCISGFQGMNLPTESGELWILGDVFIRQYFTVFDRANNQV 382
Query: 238 GWKP 241
G P
Sbjct: 383 GLAP 386
>sp|P0DJD7|PEPA4_HUMAN Pepsin A-4 OS=Homo sapiens GN=PGA4 PE=1 SV=1
Length = 388
Score = 35.4 bits (80), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 180 NSVRLVVPPEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRI 237
N V+ VPP AY++ S + C+ G E GE I+G++F++ ++D ++
Sbjct: 325 NGVQYPVPPSAYILQS--EGSCISGFQGMNLPTESGELWILGDVFIRQYFTVFDRANNQV 382
Query: 238 GWKP 241
G P
Sbjct: 383 GLAP 386
>sp|P0DJD9|PEPA5_HUMAN Pepsin A-5 OS=Homo sapiens GN=PGA5 PE=1 SV=1
Length = 388
Score = 35.4 bits (80), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 180 NSVRLVVPPEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRI 237
N V+ VPP AY++ S + C+ G E GE I+G++F++ ++D ++
Sbjct: 325 NGVQYPVPPSAYILQS--EGSCISGFQGMNVPTESGELWILGDVFIRQYFTVFDRANNQV 382
Query: 238 GWKP 241
G P
Sbjct: 383 GLAP 386
>sp|P03954|PEPA1_MACFU Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2
Length = 388
Score = 35.0 bits (79), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 180 NSVRLVVPPEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRI 237
N ++ VPP AY++ S + C G + E GE I+G++F++ ++D ++
Sbjct: 325 NGIQYPVPPSAYILQS--QGSCTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQV 382
Query: 238 GWKP 241
G P
Sbjct: 383 GLAP 386
>sp|Q29079|PAG2_PIG Pregnancy-associated glycoprotein 2 OS=Sus scrofa GN=PAG2 PE=2 SV=1
Length = 420
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 95/241 (39%), Gaps = 32/241 (13%)
Query: 24 GVLGLG------RGRISIVSQLREYGLIRN-VIGHCIG---QNGRGVLFLG-DGKVPSSG 72
G+LGL +G +++ L++ I V + + G V+F G D K
Sbjct: 181 GILGLAYPSIAIKGTTTVIDNLKKQDQISEPVFAFYLSSDKEEGSVVMFGGVDKKYYKGD 240
Query: 73 VAWTPMLQNSADLKHYILGPAELLYSGKSCGL-KDLTLIFDSGASYAYFTSRVYQEIVSL 131
+ W P+ Q S ++ + + G+ G + I D+G S + S+ +I SL
Sbjct: 241 LKWVPLTQTS----YWQIALDRITCRGRVIGCPRGCQAIVDTGTSMLHGPSKAVAKIHSL 296
Query: 132 IM---RDLI--GTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPL-------ALSFTNRR 179
I ++ + K PD P A + +Y P + FT
Sbjct: 297 IKHFEKEYVVPCNARKALPDIVFTINNVDYPVPAQAYIRKYVVPCNARKALPDIVFT--I 354
Query: 180 NSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNI--IGEIFMQDKMVIYDNEKQRI 237
N+V VP +AY+ + N C + + I +G++F++ +YD + RI
Sbjct: 355 NNVDYPVPAQAYIRKNANNNRCYSTFEDIMDTLNQREIWILGDVFLRLYFTVYDEGQNRI 414
Query: 238 G 238
G
Sbjct: 415 G 415
>sp|A1CBR4|PEPA_ASPCL Aspartic protease pep1 OS=Aspergillus clavatus (strain ATCC 1007 /
CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=pep1 PE=3
SV=1
Length = 394
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 174 SFTNRRNSVRLVVPPE--AYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYD 231
SFT + V P + Y ++ + C G + S VG+N I G+IF++ + V++D
Sbjct: 325 SFTTIIGGYKAVTPGKLINYGPVTDGSSTCYGGIQ-SSGGVGQN-IFGDIFLKSQFVVFD 382
Query: 232 NEKQRIGWKPE 242
+E R+G+ +
Sbjct: 383 SEGPRLGFAAQ 393
>sp|A1DDK1|PEPA_NEOFI Aspartic protease pep1 OS=Neosartorya fischeri (strain ATCC 1020 /
DSM 3700 / FGSC A1164 / NRRL 181) GN=pep1 PE=3 SV=1
Length = 395
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 174 SFTNRRNSVRLVVPPE--AYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYD 231
SFT VVP E Y ++ + C G + S + +G + I G++F++ + V++D
Sbjct: 326 SFTTVIGGYNAVVPGEYINYAPVTDGSSTCFGGIQ-SNSGLGFS-IFGDVFLKSQYVVFD 383
Query: 232 NEKQRIGWKPE 242
++ R+G+ P+
Sbjct: 384 SQGPRLGFAPQ 394
>sp|P11489|PEPA_MACMU Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1
Length = 388
Score = 34.7 bits (78), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 180 NSVRLVVPPEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRI 237
N V+ +PP AY++ S + C G + E GE I+G++F++ ++D ++
Sbjct: 325 NGVQYPLPPSAYILQS--QGSCTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQV 382
Query: 238 GWKP 241
G P
Sbjct: 383 GLAP 386
>sp|P41748|PEPA_ASPFU Aspartic protease pep1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pep1 PE=1
SV=2
Length = 395
Score = 34.3 bits (77), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 174 SFTNRRNSVRLVVPPE--AYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYD 231
SFT VVP E Y ++ + C G + S + +G + I G+IF++ + V++D
Sbjct: 326 SFTTVIGGYNAVVPGEYINYAPVTDGSSTCYGGIQ-SNSGLGFS-IFGDIFLKSQYVVFD 383
Query: 232 NEKQRIGWKPE 242
++ R+G+ P+
Sbjct: 384 SQGPRLGFAPQ 394
>sp|B0Y1V8|PEPA_ASPFC Aspartic protease pep1 OS=Neosartorya fumigata (strain CEA10 / CBS
144.89 / FGSC A1163) GN=pep1 PE=3 SV=1
Length = 395
Score = 34.3 bits (77), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 174 SFTNRRNSVRLVVPPE--AYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYD 231
SFT VVP E Y ++ + C G + S + +G + I G+IF++ + V++D
Sbjct: 326 SFTTVIGGYNAVVPGEYINYAPVTDGSSTCYGGIQ-SNSGLGFS-IFGDIFLKSQYVVFD 383
Query: 232 NEKQRIGWKPE 242
++ R+G+ P+
Sbjct: 384 SQGPRLGFAPQ 394
>sp|P27678|PEPA4_MACFU Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1
Length = 388
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 180 NSVRLVVPPEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRI 237
N V+ +PP AY++ S + C G + E GE I+G++F++ ++D ++
Sbjct: 325 NGVQYPLPPSAYILQS--QGSCTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQV 382
Query: 238 GWKP 241
G P
Sbjct: 383 GLAP 386
>sp|Q28389|PAG_HORSE Pregnancy-associated glycoprotein OS=Equus caballus GN=PAG PE=2
SV=1
Length = 388
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 186 VPPEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRIG 238
VP AY+ +C G+E + E I+G++F++ ++D E RIG
Sbjct: 329 VPANAYIQKDAALGICFSSFEGNEDISNNSEEWILGDVFLRLYFTVFDRENDRIG 383
>sp|C5FEK4|CTSD_ARTOC Probable aspartic-type endopeptidase CTSD (Fragment) OS=Arthroderma
otae (strain ATCC MYA-4605 / CBS 113480) GN=CTSD PE=3
SV=2
Length = 377
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 45/231 (19%)
Query: 24 GVLGLG----RGRISIVSQL--REYGLIRNVIGHCIGQNGRGV----LFLGD-GKVPSSG 72
G+LG+G + ++ V QL ++ L N+IG + +N G + GD K SG
Sbjct: 89 GILGIGPQDSKAKVPTVIQLLMQQKLLKSNIIGINLQRNSDGATDGQITFGDVDKSKFSG 148
Query: 73 -VAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSL 131
+A++ ++ + + +++ GK + + I D+G S+
Sbjct: 149 ELAYSNVVSGGY---QWEIAVDDIIVDGKPLNFQGRSGIVDTGTSF-------------- 191
Query: 132 IMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNS---VRLVVPP 188
L L PDD L I + P A V Y P + + TN S V+ + P
Sbjct: 192 ---------LLLPPDDADL-IHSKIPKSAKSSVF-YTVPCSTT-TNIELSISGVKYAIKP 239
Query: 189 EAYL-VISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIG 238
+ Y+ S K +C ++ G +A + ++G++F+++ +YD +K R+G
Sbjct: 240 KDYVGYESTTKGICNSLIIGRQAIGPKQWLLGDVFLKNVYSVYDFDKNRVG 290
>sp|P00798|PENP_PENJA Penicillopepsin OS=Penicillium janthinellum PE=1 SV=2
Length = 323
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 195 SGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPE 242
SG + CLG + S + +G + I G+IF++ + V++D++ ++G+ P+
Sbjct: 277 SGDGSTCLGGIQ-SNSGIGFS-IFGDIFLKSQYVVFDSDGPQLGFAPQ 322
>sp|C5FBS2|PEPA_ARTOC Aspartic protease PEP1 OS=Arthroderma otae (strain ATCC MYA-4605 /
CBS 113480) GN=PEP1 PE=3 SV=1
Length = 389
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 216 NIIGEIFMQDKMVIYDNEKQRIGWKPE 242
NI G++F++ + V++D + RIG+ P+
Sbjct: 362 NIFGDVFLKSQFVVWDTQGPRIGFAPQ 388
>sp|E5R1B9|PEPA_ARTGP Aspartic protease PEP1 OS=Arthroderma gypseum (strain ATCC MYA-4604
/ CBS 118893) GN=PEP1 PE=3 SV=1
Length = 403
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 216 NIIGEIFMQDKMVIYDNEKQRIGWKPE 242
NI G++F++ + V++D + RIG+ P+
Sbjct: 376 NIFGDVFLKSQFVVWDTQGPRIGFAPQ 402
>sp|P00792|PEPA_BOVIN Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2
Length = 372
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 180 NSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENN--IIGEIFMQDKMVIYDNEKQRI 237
N V+ VPP AY++ S +C G + + I+G++F++ ++D +I
Sbjct: 309 NGVQYPVPPSAYILQS--NGICSSGFEGMDISTSSGDLWILGDVFIRQYFTVFDRGNNQI 366
Query: 238 GWKP 241
G P
Sbjct: 367 GLAP 370
>sp|Q9GMY6|PEPA_CANFA Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1
Length = 386
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 180 NSVRLVVPPEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRI 237
N ++ +PP AY++ S + C+ G GE I+G++F++ ++D ++
Sbjct: 323 NGIQYPLPPSAYILQSQQG--CVSGFQGMNLPTASGELWILGDVFIRQYFAVFDRANNQV 380
Query: 238 GWKP 241
G P
Sbjct: 381 GLAP 384
>sp|Q9GMY7|PEPA_RHIFE Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1
Length = 386
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 180 NSVRLVVPPEAYLVISGRKNVCLGILNGSE--AEVGENNIIGEIFMQDKMVIYDNEKQRI 237
N V+ +PP AY++ S + C G + GE I+G++F++ ++D ++
Sbjct: 323 NGVQYPLPPSAYVLQSQQG--CTSGFQGMDIPTSSGELWILGDVFIRQYFTVFDRGNNQV 380
Query: 238 GWKP 241
G P
Sbjct: 381 GLAP 384
>sp|Q60BT7|Y378_METCA Maf-like protein MCA0378 OS=Methylococcus capsulatus (strain ATCC
33009 / NCIMB 11132 / Bath) GN=MCA0378 PE=3 SV=1
Length = 202
Score = 30.8 bits (68), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 56 NGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELL 96
GRG LF+ + + SGV P+L+ + L+H LG A LL
Sbjct: 157 QGRGELFVAELQGSFSGVMGLPLLETARLLRHLGLGTARLL 197
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.141 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,907,670
Number of Sequences: 539616
Number of extensions: 4551516
Number of successful extensions: 9364
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 9321
Number of HSP's gapped (non-prelim): 52
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)