Query 025328
Match_columns 254
No_of_seqs 138 out of 1102
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 08:07:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025328.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025328hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.6E-45 5.5E-50 331.9 21.7 236 2-242 133-398 (413)
2 1t6e_X Xylanase inhibitor; two 100.0 2.7E-44 9.1E-49 321.1 21.7 236 3-244 120-374 (381)
3 3aup_A SBG7S, BG, basic 7S glo 100.0 2E-42 6.7E-47 311.2 21.6 232 2-250 136-400 (403)
4 1lya_B Cathepsin D; lysosomal 100.0 2E-42 6.8E-47 290.7 19.3 217 2-243 7-241 (241)
5 1tzs_A Cathepsin E; hydrolase, 100.0 1.2E-40 4.1E-45 294.5 20.0 224 2-251 109-350 (351)
6 1am5_A Pepsin, acid proteinase 100.0 6.3E-40 2.1E-44 286.8 19.6 214 2-243 98-324 (324)
7 1mpp_A Pepsin; hydrolase(acid 100.0 1.3E-40 4.3E-45 295.3 14.9 227 2-248 105-360 (361)
8 1j71_A Candidapepsin, aspartic 100.0 2.1E-40 7.3E-45 290.9 15.1 210 2-251 108-332 (334)
9 3psg_A Pepsinogen; hydrolase(a 100.0 6.7E-40 2.3E-44 291.5 17.2 215 2-243 142-370 (370)
10 1htr_B Gastricsin; aspartyl pr 100.0 8E-40 2.7E-44 286.7 17.4 215 2-243 98-329 (329)
11 2qzx_A Candidapepsin-5; aspart 100.0 4.8E-40 1.6E-44 289.6 15.4 214 2-251 108-339 (342)
12 1yg9_A Aspartic protease BLA G 100.0 3.1E-40 1.1E-44 289.5 13.9 212 2-243 102-329 (330)
13 2x0b_A Renin; hydrolase-hormon 100.0 3E-40 1E-44 294.7 13.9 215 3-243 149-383 (383)
14 1dpj_A Proteinase A; proteinas 100.0 1.8E-39 6.2E-44 284.4 18.4 213 2-243 99-329 (329)
15 2apr_A Rhizopuspepsin; hydrola 100.0 1.7E-39 5.8E-44 284.2 16.8 210 2-243 101-324 (325)
16 2ewy_A Beta-secretase 2; BACE2 100.0 2.8E-39 9.6E-44 288.7 18.5 233 2-249 97-361 (383)
17 3cms_A Chymosin B; hydrolase, 100.0 6.6E-40 2.3E-44 286.6 14.1 212 2-243 100-323 (323)
18 1ibq_A Aspergillopepsin; aspar 100.0 1.7E-39 5.9E-44 284.2 15.3 214 2-243 98-325 (325)
19 3vf3_A Beta-secretase 1; struc 100.0 6.4E-39 2.2E-43 288.1 19.3 234 3-251 113-382 (402)
20 3fv3_A SAPP1P-secreted asparti 100.0 2.7E-39 9.3E-44 284.3 15.8 214 2-251 102-337 (339)
21 2qp8_A Beta-secretase 1; BACE1 100.0 4.9E-39 1.7E-43 288.3 17.5 232 3-251 106-375 (395)
22 4aa9_A Chymosin; hydrolase, as 100.0 1.6E-39 5.6E-44 283.6 13.6 212 2-243 97-320 (320)
23 3pvk_A Candidapepsin-2; hydrol 100.0 2.4E-39 8.2E-44 284.9 14.5 213 2-250 108-338 (342)
24 3lpj_A Beta-secretase 1; alzhe 100.0 9.4E-39 3.2E-43 291.3 18.9 233 3-250 159-427 (455)
25 1izd_A Aspartic proteinase; su 100.0 2.2E-39 7.4E-44 283.3 13.4 212 2-242 99-322 (323)
26 1wkr_A Polyporopepsin; hydrola 100.0 7.3E-39 2.5E-43 281.8 16.7 221 2-248 86-338 (340)
27 3k1w_A Renin; protease, altern 100.0 4.7E-39 1.6E-43 282.9 14.5 215 2-243 105-340 (341)
28 1bxo_A Protein (penicillopepsi 100.0 4.7E-39 1.6E-43 281.2 14.4 211 2-242 99-322 (323)
29 3c9x_A Trichoderma reesei aspa 100.0 6.4E-39 2.2E-43 281.0 15.1 213 2-242 103-329 (329)
30 1oew_A Endothiapepsin; hydrola 100.0 6.7E-39 2.3E-43 280.9 12.8 213 2-242 102-329 (329)
31 1miq_A Plasmepsin; aspartic pr 100.0 1.8E-38 6E-43 282.8 15.5 208 4-243 149-374 (375)
32 1qdm_A Prophytepsin; aspartic 100.0 2E-37 6.7E-42 283.6 16.5 231 2-242 139-477 (478)
33 2bju_A Plasmepsin II; aspartic 100.0 2.2E-37 7.6E-42 281.0 10.5 210 3-243 224-450 (453)
34 3qvc_A Histo-aspartic protease 100.0 7.6E-37 2.6E-41 277.6 12.5 209 3-243 223-449 (451)
35 1b5f_A Protein (cardosin A); h 99.9 3.2E-23 1.1E-27 173.5 9.0 127 2-133 100-237 (239)
36 1b5f_B Protein (cardosin A); h 99.7 6E-18 2E-22 119.4 7.0 74 166-243 11-87 (87)
37 3s8i_A Protein DDI1 homolog 1; 92.1 0.18 6.3E-06 38.0 4.6 28 215-242 108-135 (148)
38 2i1a_A DNA damage-inducible pr 78.8 2.3 7.8E-05 31.5 4.3 27 215-241 109-135 (148)
39 1lya_A Cathepsin D; lysosomal 49.7 8.6 0.00029 26.3 2.1 40 76-123 5-44 (97)
40 1mpp_A Pepsin; hydrolase(acid 42.2 32 0.0011 29.1 5.0 45 71-123 5-49 (361)
41 1t6e_X Xylanase inhibitor; two 40.3 23 0.00079 30.4 3.8 35 76-122 5-39 (381)
42 2hs1_A HIV-1 protease; ultra-h 38.3 31 0.0011 23.8 3.4 31 87-122 5-35 (99)
43 1bxo_A Protein (penicillopepsi 38.1 23 0.00079 29.5 3.4 43 71-125 4-46 (323)
44 1fmb_A EIAV protease; hydrolas 35.6 31 0.0011 24.0 3.1 34 87-125 5-38 (104)
45 1izd_A Aspartic proteinase; su 35.4 27 0.00092 29.1 3.4 42 72-125 5-46 (323)
46 3cms_A Chymosin B; hydrolase, 35.2 24 0.00082 29.4 3.0 43 73-123 3-45 (323)
47 1ibq_A Aspergillopepsin; aspar 34.1 28 0.00096 29.0 3.3 42 72-125 4-45 (325)
48 1j71_A Candidapepsin, aspartic 33.7 52 0.0018 27.4 5.0 39 76-123 5-43 (334)
49 3ec0_A Protease; HIV-2, inhibi 32.2 37 0.0013 23.4 3.0 30 87-121 5-34 (99)
50 2qzx_A Candidapepsin-5; aspart 31.7 58 0.002 27.2 4.9 32 86-123 12-43 (342)
51 3fv3_A SAPP1P-secreted asparti 31.0 30 0.001 28.9 3.0 39 76-123 5-43 (339)
52 3aup_A SBG7S, BG, basic 7S glo 30.7 32 0.0011 29.7 3.2 41 76-123 12-52 (403)
53 2i1a_A DNA damage-inducible pr 30.7 11 0.00037 27.6 0.1 35 86-128 25-59 (148)
54 2hah_A Protease, retropepsin; 30.7 41 0.0014 23.9 3.1 31 86-122 10-40 (116)
55 3slz_A GAG-Pro-POL polyprotein 29.9 51 0.0017 24.0 3.6 29 89-122 21-49 (132)
56 1yg9_A Aspartic protease BLA G 29.4 50 0.0017 27.6 4.1 30 86-123 17-46 (330)
57 3vla_A EDGP; extracellular, in 28.5 50 0.0017 28.7 4.0 46 71-123 6-51 (413)
58 1oew_A Endothiapepsin; hydrola 28.1 78 0.0027 26.3 5.1 32 86-123 15-46 (329)
59 3c9x_A Trichoderma reesei aspa 27.9 74 0.0025 26.4 4.9 34 86-125 15-48 (329)
60 4aa9_A Chymosin; hydrolase, as 26.4 35 0.0012 28.2 2.6 32 86-123 11-42 (320)
61 3pvk_A Candidapepsin-2; hydrol 25.2 44 0.0015 27.9 3.0 32 86-123 12-43 (342)
62 3psg_A Pepsinogen; hydrolase(a 23.9 37 0.0013 29.0 2.3 43 73-123 45-87 (370)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.6e-45 Score=331.85 Aligned_cols=236 Identities=18% Similarity=0.333 Sum_probs=189.0
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCCChHHHHHHhCCccCeEEEEecC--CCcEEEEECCCCC-------CCCC
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQ--NGRGVLFLGDGKV-------PSSG 72 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~i~~~Fs~~l~~--~~~G~l~fGg~~~-------~~~~ 72 (254)
+++|||++++..... ...+|||||||++++|++.||.++++++++||+||.+ +.+|+|+||+.+. +.++
T Consensus 133 ~~~FGc~~~~~~~g~--~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~ 210 (413)
T 3vla_A 133 RFIFSCAPTSLLQNL--ASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDK 210 (413)
T ss_dssp EEEEEEECGGGGTTS--CTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTT
T ss_pred CEEEECcccccccCc--ccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCC
Confidence 579999998732211 2578999999999999999999988789999999986 4689999999874 3567
Q ss_pred -ceEEecccCCCC----------CCCeEEeeeEEEECCEEecCC----------CCeEEEecCCccEEeChHHHHHHHHH
Q 025328 73 -VAWTPMLQNSAD----------LKHYILGPAELLYSGKSCGLK----------DLTLIFDSGASYAYFTSRVYQEIVSL 131 (254)
Q Consensus 73 -i~~~pi~~~~~~----------~~~y~v~l~~i~v~~~~~~~~----------~~~~iiDSGTt~~~lp~~~~~~l~~~ 131 (254)
+.|||++.++.. ..+|.|.|++|+||++.+.++ ...+||||||++++||+++|++|.++
T Consensus 211 ~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a 290 (413)
T 3vla_A 211 TLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEA 290 (413)
T ss_dssp TSEEEECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHH
T ss_pred ceeEeecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHH
Confidence 999999987422 269999999999999998764 36899999999999999999999999
Q ss_pred HHHHhcCCCCccCCCCCCCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEEEEEcCCcCC
Q 025328 132 IMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAE 211 (254)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~ 211 (254)
|.+++...+++++.....+..||..+......+...+|+|+|+|+|. ++.|+|++++|+++...+.+|++++.....
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~--~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~- 367 (413)
T 3vla_A 291 FIKESAARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSE--SVVWTITGSNSMVYINDNVVCLGVVDGGSN- 367 (413)
T ss_dssp HHHHHHHTTCCEECCCTTCSCEEECTTCCEETTEECCCCEEEECSST--TCEEEECHHHHEEEEETTEEEECEEEEESS-
T ss_pred HHHHhcccCCCcCCCCCCCcceeccCCccccccccCCCcEEEEEcCC--cEEEEeCccceEEEeCCCcEEEEEEecCCC-
Confidence 99887532244443334567899863211111224799999999973 389999999999987667799998865421
Q ss_pred CCCceeeccceeeceEEEEeCCCCEEeeecC
Q 025328 212 VGENNIIGEIFMQDKMVIYDNEKQRIGWKPE 242 (254)
Q Consensus 212 ~~~~~iLG~~f~~~~~vvfD~~~~rIGfa~~ 242 (254)
....||||++|||++|+|||++++|||||++
T Consensus 368 ~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 368 LRTSIVIGGHQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp CSSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cccceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence 1358999999999999999999999999974
No 2
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.7e-44 Score=321.13 Aligned_cols=236 Identities=15% Similarity=0.290 Sum_probs=183.6
Q ss_pred eEEeeccCCCCCCCCCCCCcceEeecCCCCCChHHHHHHhCCccCeEEEEecCCCcEEEEECCCCC----CCCCceEEec
Q 025328 3 SFCSCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKV----PSSGVAWTPM 78 (254)
Q Consensus 3 ~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~i~~~Fs~~l~~~~~G~l~fGg~~~----~~~~i~~~pi 78 (254)
++|||++++..... ....|||||||++++|++.||.++++++++||+||.+..+|+|+|||++. +.+++.|+|+
T Consensus 120 ~~Fg~~~~~~~~~~--~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl 197 (381)
T 1t6e_X 120 VLAACAPSKLLASL--PRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPL 197 (381)
T ss_dssp EEEEECCGGGGTTS--CTTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEEC
T ss_pred eEeecCcccccCCC--CCCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeecc
Confidence 47899988621111 25789999999999999999999887799999999976799999999874 3689999999
Q ss_pred ccCCCCCCCeEEeeeEEEECCEEecCC-----CCeEEEecCCccEEeChHHHHHHHHHHHHHhcC-----CCCccC-CCC
Q 025328 79 LQNSADLKHYILGPAELLYSGKSCGLK-----DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIG-----TPLKLA-PDD 147 (254)
Q Consensus 79 ~~~~~~~~~y~v~l~~i~v~~~~~~~~-----~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~-----~~~~~~-~~~ 147 (254)
+.++. ..+|.|.|++|+|+++.+.++ ...+||||||++++||+++|++|.+++.++... .++++. ...
T Consensus 198 ~~~~~-~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 276 (381)
T 1t6e_X 198 VTKGG-SPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAV 276 (381)
T ss_dssp BCCTT-CCSCEECEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCC
T ss_pred ccCCC-CcceEEEEEEEEEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCC
Confidence 97642 246779999999999988654 257999999999999999999999999887641 112222 223
Q ss_pred CCCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEEEEEcCCcC----CCCCceeecccee
Q 025328 148 KTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEA----EVGENNIIGEIFM 223 (254)
Q Consensus 148 ~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~~~~~~~~~----~~~~~~iLG~~f~ 223 (254)
..+..|+..+..........+|+|+|+|+| +++++||+++|++...++..|++++..... +..+.||||+.||
T Consensus 277 ~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g---g~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl 353 (381)
T 1t6e_X 277 APFGVCYDTKTLGNNLGGYAVPNVQLGLDG---GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQM 353 (381)
T ss_dssp TTCSCEEEGGGCCEETTEECCCCEEEEETT---SCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHH
T ss_pred CCCCccCCCCCCcccccCCcCCeEEEEECC---CcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHh
Confidence 456789875311000011368999999987 599999999999987656789998865421 1125799999999
Q ss_pred eceEEEEeCCCCEEeeecCCC
Q 025328 224 QDKMVIYDNEKQRIGWKPEDC 244 (254)
Q Consensus 224 ~~~~vvfD~~~~rIGfa~~~c 244 (254)
|++|+|||++++|||||++..
T Consensus 354 ~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 354 EDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp TTEEEEEETTTTEEEEEECCT
T ss_pred CCcEEEEECCCCEEEEecccC
Confidence 999999999999999998654
No 3
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2e-42 Score=311.16 Aligned_cols=232 Identities=19% Similarity=0.362 Sum_probs=183.5
Q ss_pred ceEEeeccCCCCC-CCCCCCCcceEeecCCCCCChHHHHHHhCCccCeEEEEecC--CCcEEEEECCCCC--C--C-C--
Q 025328 2 LSFCSCGYNQHNP-GPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQ--NGRGVLFLGDGKV--P--S-S-- 71 (254)
Q Consensus 2 ~~~fGc~~~~~~~-~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~i~~~Fs~~l~~--~~~G~l~fGg~~~--~--~-~-- 71 (254)
+++|||++++... + .....+||||||++++|++.|+.+..+.+++||+||.+ ..+|.|+||| |. + . +
T Consensus 136 ~~~Fg~~~~~~~~~~--~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~ 212 (403)
T 3aup_A 136 QFLFSCAPSFLVQKG--LPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQD 212 (403)
T ss_dssp EEEEEEECGGGGSSS--SSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCC
T ss_pred CEEEECCcccccccC--CCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-Cchhcccccccc
Confidence 5799999987433 2 13578999999999999999997654448999999986 4689999999 73 3 3 4
Q ss_pred ---CceEEecccCCCCCCCeEEeeeEEEECCEEe-cCCC----------CeEEEecCCccEEeChHHHHHHHHHHHHHhc
Q 025328 72 ---GVAWTPMLQNSADLKHYILGPAELLYSGKSC-GLKD----------LTLIFDSGASYAYFTSRVYQEIVSLIMRDLI 137 (254)
Q Consensus 72 ---~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~-~~~~----------~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~ 137 (254)
++.|+|++.++ ..+|.|.|++|+|+++.+ .++. ..+||||||++++||+++|++|.+++.+++.
T Consensus 213 ~~~~l~~~Pl~~~~--~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~ 290 (403)
T 3aup_A 213 IFHDLAFTPLTITL--QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLP 290 (403)
T ss_dssp TTTTEEEEECEECT--TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSC
T ss_pred ccCceeecccccCC--CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhc
Confidence 99999999874 269999999999999988 5432 3599999999999999999999999987654
Q ss_pred CCCCccCCCCCCCCcccCCCCCCcccccccCCcEEEEEccCCcc--eEEEecCCceEEEeCCCceEEEEEcCCcCCCCCc
Q 025328 138 GTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNS--VRLVVPPEAYLVISGRKNVCLGILNGSEAEVGEN 215 (254)
Q Consensus 138 ~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~--~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ 215 (254)
. ++++.....+..|+. |..+ +.+|+|+|+|+| + +.++||+++|++...++..|++|+..... ....
T Consensus 291 ~--~~~~~~~~~~~~c~~-----c~~~-~~~P~i~f~f~g---~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~-~~~~ 358 (403)
T 3aup_A 291 K--QAQVKSVAPFGLCFN-----SNKI-NAYPSVDLVMDK---PNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQ-PRAE 358 (403)
T ss_dssp G--GGEECCCTTCSCEEC-----GGGC-CCCCCEEEEESS---TTCCEEEECHHHHEEEC---CEEECEEECCSC-CSSS
T ss_pred c--ccccCCCCCCCceEE-----CCCc-CcCCcEEEEEcC---CCceEEEEcccceEEEcCCCeEEEEEEcCCCC-CCCc
Confidence 3 223222223456876 3333 378999999998 4 69999999999987656789988876531 1357
Q ss_pred eeeccceeeceEEEEeCCCCEEee-------ecCCCCccccc
Q 025328 216 NIIGEIFMQDKMVIYDNEKQRIGW-------KPEDCNTLLSL 250 (254)
Q Consensus 216 ~iLG~~f~~~~~vvfD~~~~rIGf-------a~~~c~~~~~~ 250 (254)
||||+.|||++|+|||++++|||| ++++|+.+.+.
T Consensus 359 ~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~~~~~~ 400 (403)
T 3aup_A 359 ITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCADLFNF 400 (403)
T ss_dssp EEECHHHHTTSCEEEETTTTEEEEESSCGGGGTCCGGGSCCT
T ss_pred EEEChHHhcCeEEEEECCCCEEEEecccccccCCCccccccc
Confidence 999999999999999999999999 78899887654
No 4
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=2e-42 Score=290.65 Aligned_cols=217 Identities=16% Similarity=0.279 Sum_probs=174.3
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCC------ChHHHHHHhCCc-cCeEEEEecCC--C--cEEEEECCCCC--
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI------SIVSQLREYGLI-RNVIGHCIGQN--G--RGVLFLGDGKV-- 68 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~------s~~~ql~~~~~i-~~~Fs~~l~~~--~--~G~l~fGg~~~-- 68 (254)
+++|||++++.+.+. .....|||||||++.+ +++.+|.++++| +++||+||.+. . .|+|+|||+|+
T Consensus 7 ~~~Fg~~~~~~~~~f-~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~ 85 (241)
T 1lya_B 7 RQVFGEATKQPGITF-IAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDSKY 85 (241)
T ss_dssp EEEEEEEEECCSSTT-TSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCCGGG
T ss_pred CeEEEEEEEccCCcc-ccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcCHHH
Confidence 689999999876432 3467899999999765 467899999998 79999999864 2 89999999984
Q ss_pred CCCCceEEecccCCCCCCCeEEeeeEEEECCEEe-cCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCC
Q 025328 69 PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSC-GLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDD 147 (254)
Q Consensus 69 ~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~-~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~ 147 (254)
+.+++.|+|+.+ +.+|.|.+++|+|+++.+ ......+|+||||+++++|++++++|.+++.+... . ..
T Consensus 86 ~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~--~g 154 (241)
T 1lya_B 86 YKGSLSYLNVTR----KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL-----I--QG 154 (241)
T ss_dssp EEEEEEEEECSS----BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE-----E--TT
T ss_pred cCCceEEEECcc----ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec-----c--CC
Confidence 568999999985 379999999999999764 23457899999999999999999999998854321 0 11
Q ss_pred CCCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCC--CceEE-EEEcCCcC-CCCCceeecccee
Q 025328 148 KTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCL-GILNGSEA-EVGENNIIGEIFM 223 (254)
Q Consensus 148 ~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~~-~~~~~~iLG~~f~ 223 (254)
.+...|+.. +.+|+|+|+|+| .+++|||++|++.... +..|+ ++...+.. +..+.||||++||
T Consensus 155 ~~~~~C~~~---------~~~p~i~f~f~g----~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl 221 (241)
T 1lya_B 155 EYMIPCEKV---------STLPAITLKLGG----KGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFI 221 (241)
T ss_dssp EEEEEGGGG---------GGSCCEEEEETT----EEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHH
T ss_pred cEEEECCCC---------ccCCeEEEEECC----EEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHh
Confidence 122357652 368999999977 9999999999998753 46898 57764321 1246899999999
Q ss_pred eceEEEEeCCCCEEeeecCC
Q 025328 224 QDKMVIYDNEKQRIGWKPED 243 (254)
Q Consensus 224 ~~~~vvfD~~~~rIGfa~~~ 243 (254)
|++|+|||++++|||||+++
T Consensus 222 ~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 222 GRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp TTEEEEEETTTTEEEEEEEC
T ss_pred cceEEEEECCCCEEEEEEcC
Confidence 99999999999999999863
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=294.45 Aligned_cols=224 Identities=16% Similarity=0.253 Sum_probs=173.3
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCCC------hHHHHHHhCCc-cCeEEEEecCCC----cEEEEECCCCC--
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRIS------IVSQLREYGLI-RNVIGHCIGQNG----RGVLFLGDGKV-- 68 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~s------~~~ql~~~~~i-~~~Fs~~l~~~~----~G~l~fGg~~~-- 68 (254)
+++|||++++.+.. +.....+||||||++.++ ++.+|.++++| +++||+||.+.. .|.|+|||+|+
T Consensus 109 ~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~ 187 (351)
T 1tzs_A 109 GQQFGESVTEPGQT-FVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSH 187 (351)
T ss_dssp EEEEEEECSCCCGG-GGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGG
T ss_pred CeEEEEEEeccccc-cccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHH
Confidence 57999999886642 124578999999998654 77899999998 799999998642 89999999984
Q ss_pred CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecC-CCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCC
Q 025328 69 PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDD 147 (254)
Q Consensus 69 ~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~-~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~ 147 (254)
+.+++.|+|+... .+|.|.+++|+|+++.+.. ....+||||||++++||++++++|.+++.+... ..
T Consensus 188 ~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~--------~g 255 (351)
T 1tzs_A 188 FSGSLNWVPVTKQ----AYWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV--------DG 255 (351)
T ss_dssp BCSCCEEEECSEE----TTEEEEEEEEEETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------SS
T ss_pred cCCceEEEecCCC----ceEEEEeCEEEECCceEEcCCCceEEeccCCcceeCCHHHHHHHHHHhCCccc--------CC
Confidence 5799999999863 6999999999999988533 357899999999999999999999998844321 11
Q ss_pred CCCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCC--CceEE-EEEcCCcC-CCCCceeecccee
Q 025328 148 KTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCL-GILNGSEA-EVGENNIIGEIFM 223 (254)
Q Consensus 148 ~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~~-~~~~~~iLG~~f~ 223 (254)
.+...|+.. ..+|+|+|+|+| ..++||+++|++.... +..|+ ++...+.. +....||||++||
T Consensus 256 ~~~~~C~~~---------~~~P~i~f~f~g----~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl 322 (351)
T 1tzs_A 256 EYAVECANL---------NVMPDVTFTING----VPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFI 322 (351)
T ss_dssp SEEECGGGG---------GGSCCEEEEETT----EEEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHH
T ss_pred eEEEeCCCC---------ccCCcEEEEECC----EEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHh
Confidence 122357652 368999999977 9999999999997542 35898 57754321 1246899999999
Q ss_pred eceEEEEeCCCCEEeeecCCCCcccccC
Q 025328 224 QDKMVIYDNEKQRIGWKPEDCNTLLSLN 251 (254)
Q Consensus 224 ~~~~vvfD~~~~rIGfa~~~c~~~~~~~ 251 (254)
|++|+|||++++|||||+++|....+++
T Consensus 323 ~~~y~vfD~~~~rigfA~~~~~s~~~~~ 350 (351)
T 1tzs_A 323 RQFYSVFDRGNNRVGLAPAVPWSHPQFE 350 (351)
T ss_dssp HHEEEEEETTTTEEEEEEBC--------
T ss_pred hheEEEEECCCCEEEEEECCcccchhhc
Confidence 9999999999999999999998766543
No 6
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=6.3e-40 Score=286.80 Aligned_cols=214 Identities=17% Similarity=0.339 Sum_probs=175.1
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCC------ChHHHHHHhCCc-cCeEEEEecCC--CcEEEEECCCCC--CC
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI------SIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLGDGKV--PS 70 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~------s~~~ql~~~~~i-~~~Fs~~l~~~--~~G~l~fGg~~~--~~ 70 (254)
+++|||++++.+.+ +.....+||||||++.+ +++.+|.++++| +++||+||.+. ..|.|+|||+|+ +.
T Consensus 98 ~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~ 176 (324)
T 1am5_A 98 NQELGESQTEPGPF-QAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYT 176 (324)
T ss_dssp EEEEEEEEECCSTT-TTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBC
T ss_pred ccEEEEEEeccccc-ccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcC
Confidence 57999999886643 23467899999999765 477899999988 89999999864 489999999984 57
Q ss_pred CCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCCCC
Q 025328 71 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTL 150 (254)
Q Consensus 71 ~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 150 (254)
+++.|+|+... .+|.|.+++|+|+++.+..+...+||||||++++||++++++|.+++.+. .. ...+.
T Consensus 177 g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~~-------~g~~~ 244 (324)
T 1am5_A 177 GSIHWIPVTAE----KYWQVALDGITVNGQTAACEGCQAIVDTGTSKIVAPVSALANIMKDIGAS-EN-------QGEMM 244 (324)
T ss_dssp SCCEEEEEEEE----TTEEEEECEEEETTEECCCCCEEEEECTTCSSEEECTTTHHHHHHHHTCE-EC-------CCCEE
T ss_pred CceEEEecCCC----cEEEEEEeEEEECCceeeccCceEEEecCCccEECCHHHHHHHHHHhCCc-cc-------CCcEE
Confidence 99999999863 69999999999999886544489999999999999999999999988554 21 11223
Q ss_pred CcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEE-EEEcCCcC-CCCCceeeccceeeceEE
Q 025328 151 PICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCL-GILNGSEA-EVGENNIIGEIFMQDKMV 228 (254)
Q Consensus 151 ~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~-~~~~~~iLG~~f~~~~~v 228 (254)
..|+.. +.+|+|+|+|+| ..++|||++|++.. +..|+ ++...+.. +....||||+.|||++|+
T Consensus 245 ~~C~~~---------~~~P~i~f~f~g----~~~~i~~~~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~ 309 (324)
T 1am5_A 245 GNCASV---------QSLPDITFTING----VKQPLPPSAYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYT 309 (324)
T ss_dssp CCTTSS---------SSSCCEEEEETT----EEEEECHHHHEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEE
T ss_pred EeCCCc---------ccCCcEEEEECC----EEEEECHHHhcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEE
Confidence 458653 368999999987 99999999999986 56898 67654321 124589999999999999
Q ss_pred EEeCCCCEEeeecCC
Q 025328 229 IYDNEKQRIGWKPED 243 (254)
Q Consensus 229 vfD~~~~rIGfa~~~ 243 (254)
|||++++|||||+++
T Consensus 310 vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 310 IYDRTNNKVGFAPAA 324 (324)
T ss_dssp EEETTTTEEEEEEBC
T ss_pred EEECCCCEEEEEECC
Confidence 999999999999864
No 7
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.3e-40 Score=295.30 Aligned_cols=227 Identities=17% Similarity=0.249 Sum_probs=179.1
Q ss_pred ceEEeeccCCCC-----CCCCCCCCcceEeecCCCCC------------ChHHHHHHhCCc-cCeEEEEecCC-CcEEEE
Q 025328 2 LSFCSCGYNQHN-----PGPLSPPDTAGVLGLGRGRI------------SIVSQLREYGLI-RNVIGHCIGQN-GRGVLF 62 (254)
Q Consensus 2 ~~~fGc~~~~~~-----~~~~~~~~~dGIlGLg~~~~------------s~~~ql~~~~~i-~~~Fs~~l~~~-~~G~l~ 62 (254)
+++|||++++.+ .+ +.....+||||||++.+ +++.+|.++++| +++||+||.+. ..|.|+
T Consensus 105 ~~~fg~~~~~~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~ 183 (361)
T 1mpp_A 105 QQTLAYVDNVSGPTAEQSP-DSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVV 183 (361)
T ss_dssp EEEEEEEEEEESGGGSSCT-TCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEE
T ss_pred ceEEEEEEeccCccccccc-cccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEE
Confidence 579999998865 22 23467899999998754 456689999998 79999999974 589999
Q ss_pred ECCCCC--CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecC-CCCeEE-EecCCccEEeChHHHHHHHHHHHHHhcC
Q 025328 63 LGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-KDLTLI-FDSGASYAYFTSRVYQEIVSLIMRDLIG 138 (254)
Q Consensus 63 fGg~~~--~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~-~~~~~i-iDSGTt~~~lp~~~~~~l~~~~~~~~~~ 138 (254)
|||+|+ +.+++.|+|+........+|.|.+++|+|+++.+.. ....+| |||||++++||+++|++|.+++.+...
T Consensus 184 fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~- 262 (361)
T 1mpp_A 184 FGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT- 262 (361)
T ss_dssp ESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-
T ss_pred EecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-
Confidence 999984 579999999987642122899999999999988743 246899 999999999999999999998855322
Q ss_pred CCCccCCCCCCCCcccCCCCCCcccccccC-CcEEEEE--ccC-CcceEEEecCCceEEEeCC-CceEE-EEEcCCcCCC
Q 025328 139 TPLKLAPDDKTLPICWRGPFKALGQVTEYF-KPLALSF--TNR-RNSVRLVVPPEAYLVISGR-KNVCL-GILNGSEAEV 212 (254)
Q Consensus 139 ~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~-P~i~f~f--~g~-~~~~~~~i~~~~y~~~~~~-~~~C~-~~~~~~~~~~ 212 (254)
.. ...+...|+.. ..+ |+|+|+| ++. .+++.++||+++|+++... +..|+ ++....
T Consensus 263 ----~~-~g~~~~~C~~~---------~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~---- 324 (361)
T 1mpp_A 263 ----ES-QQGYTVPCSKY---------QDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG---- 324 (361)
T ss_dssp ----EE-TTEEEEEHHHH---------TTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES----
T ss_pred ----CC-CCcEEEECCCc---------ccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC----
Confidence 11 11122457642 356 9999999 611 0139999999999998753 46898 677642
Q ss_pred CCceeeccceeeceEEEEeCCCCEEeeecCCCCccc
Q 025328 213 GENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLL 248 (254)
Q Consensus 213 ~~~~iLG~~f~~~~~vvfD~~~~rIGfa~~~c~~~~ 248 (254)
.+.||||++|||++|+|||++++|||||+++|+...
T Consensus 325 ~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~~ 360 (361)
T 1mpp_A 325 GNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYEN 360 (361)
T ss_dssp SSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTCC
T ss_pred CCCEEEChHHhccEEEEEECCCCEEEEEEcccCCCC
Confidence 358999999999999999999999999999999754
No 8
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.1e-40 Score=290.94 Aligned_cols=210 Identities=15% Similarity=0.311 Sum_probs=173.4
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCC--------ChHHHHHHhCCc-cCeEEEEecC--CCcEEEEECCCCC--
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI--------SIVSQLREYGLI-RNVIGHCIGQ--NGRGVLFLGDGKV-- 68 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~--------s~~~ql~~~~~i-~~~Fs~~l~~--~~~G~l~fGg~~~-- 68 (254)
+++|||++++. ..+||||||++.+ +++.+|.++++| +++||+||.+ ...|.|+|||+|+
T Consensus 108 ~~~fg~~~~~~--------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~ 179 (334)
T 1j71_A 108 NQQFADVTTTS--------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAK 179 (334)
T ss_dssp EEEEEEEEEES--------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTS
T ss_pred cEEEEEEEecC--------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHH
Confidence 57999999762 4789999999764 789999999999 7999999985 4689999999974
Q ss_pred CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCC
Q 025328 69 PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDK 148 (254)
Q Consensus 69 ~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~ 148 (254)
+.+++.|+|+... .+|.|.+++|+|+++.+.. ...+||||||++++||+++|++|.+++.+.... . ...
T Consensus 180 ~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~-~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~-----~-~~~ 248 (334)
T 1j71_A 180 YTGTLTALPVTSS----VELRVHLGSINFDGTSVST-NADVVLDSGTTITYFSQSTADKFARIVGATWDS-----R-NEI 248 (334)
T ss_dssp EEEEEEEEECCCS----SSCEEEEEEEEETTEEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEET-----T-TTE
T ss_pred ccCceEEEEccCC----CeEEEEEeEEEECCEeccC-CccEEEeCCCCcEecCHHHHHHHHHHcCCcccC-----C-Cce
Confidence 4689999999864 5899999999999998864 578999999999999999999999998654421 0 111
Q ss_pred CC-CcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEEE-EEcCCcCCCCCceeeccceeece
Q 025328 149 TL-PICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLG-ILNGSEAEVGENNIIGEIFMQDK 226 (254)
Q Consensus 149 ~~-~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~~-~~~~~~~~~~~~~iLG~~f~~~~ 226 (254)
+. ..|+. +|.|+|+|.+ +++++||+++|++...++..|+. +... +.||||+.|||++
T Consensus 249 ~~~~~C~~------------~p~i~f~f~~---g~~~~i~~~~y~~~~~~~~~C~~~i~~~------~~~iLG~~fl~~~ 307 (334)
T 1j71_A 249 YRLPSCDL------------SGDAVFNFDQ---GVKITVPLSELILKDSDSSICYFGISRN------DANILGDNFLRRA 307 (334)
T ss_dssp EECSSSCC------------CSEEEEEEST---TCEEEEEGGGGEEECSSSSCEEESEEEC------TTCEECHHHHTTE
T ss_pred EEEEcCCC------------CCceEEEEcC---CcEEEECHHHheeecCCCCeeEEEEeEC------CCcEEChHhhccE
Confidence 12 45642 6999999965 49999999999998755556985 5433 3599999999999
Q ss_pred EEEEeCCCCEEeeecCCCCcccccC
Q 025328 227 MVIYDNEKQRIGWKPEDCNTLLSLN 251 (254)
Q Consensus 227 ~vvfD~~~~rIGfa~~~c~~~~~~~ 251 (254)
|+|||++++|||||+++|+..+++.
T Consensus 308 y~vfD~~~~~igfA~~~~~~~~~i~ 332 (334)
T 1j71_A 308 YIVYDLDDKTISLAQVKYTSSSDIS 332 (334)
T ss_dssp EEEEETTTTEEEEEEECCCSCCCEE
T ss_pred EEEEECCCCEEEEEecCCCCccceE
Confidence 9999999999999999999766653
No 9
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=6.7e-40 Score=291.48 Aligned_cols=215 Identities=18% Similarity=0.326 Sum_probs=171.5
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCC------ChHHHHHHhCCc-cCeEEEEecCC--CcEEEEECCCCC--CC
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI------SIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLGDGKV--PS 70 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~------s~~~ql~~~~~i-~~~Fs~~l~~~--~~G~l~fGg~~~--~~ 70 (254)
+++|||++.+.+.. +.....|||||||++.+ ++..+|.++|+| +++||+||.+. .+|+|+|||+|+ +.
T Consensus 142 ~~~Fg~a~~~~~~~-~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~ 220 (370)
T 3psg_A 142 NQIFGLSETEPGSF-LYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYT 220 (370)
T ss_dssp EEEEEEECSCCCGG-GGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBS
T ss_pred CeEEEEEEeecccc-cccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcC
Confidence 57899999886643 23457899999999865 477889999999 79999999963 589999999984 68
Q ss_pred CCceEEecccCCCCCCCeEEeeeEEEECCEEecC-CCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCCC
Q 025328 71 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKT 149 (254)
Q Consensus 71 ~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~-~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 149 (254)
+++.|+|+... .+|.|.+++|+|+++.+.. ....+||||||+++++|++++++|.+++.+... . ...+
T Consensus 221 g~l~~~pv~~~----~~w~v~l~~i~v~g~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~------~-~g~~ 289 (370)
T 3psg_A 221 GSLNWVPVSVE----GYWQITLDSITMDGETIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN------S-DGEM 289 (370)
T ss_dssp SCCEEEECSEE----TTEEEEECEEESSSSEEECTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC------T-TCCE
T ss_pred Ccceeeccccc----ceeEEEEeEEEECCEEEecCCCceEEEcCCCCcEECCHHHHHHHHHHhCCccc------C-CCcE
Confidence 99999999864 6899999999999987754 357999999999999999999999988754321 0 1112
Q ss_pred CCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEE-EEEcCCcC-CCCCceeeccceeeceE
Q 025328 150 LPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCL-GILNGSEA-EVGENNIIGEIFMQDKM 227 (254)
Q Consensus 150 ~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~-~~~~~~iLG~~f~~~~~ 227 (254)
...|... ..+|+|+|+|+| +.++||+++|++. .+..|+ ++...+.. ..+..||||++|||++|
T Consensus 290 ~v~C~~~---------~~lP~i~f~~~g----~~~~l~~~~yi~~--~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y 354 (370)
T 3psg_A 290 VISCSSI---------DSLPDIVFTIDG----VQYPLSPSAYILQ--DDDSCTSGFEGMDVPTSSGELWILGDVFIRQYY 354 (370)
T ss_dssp ECCGGGG---------GGCCCEEEEETT----EEEEECHHHHEEE--CSSCEEESEEEECCCTTSCCEEEECHHHHTTEE
T ss_pred EEECCCc---------ccCCcEEEEECC----EEEEECHHHhccc--CCCEEEEEEEeCCCCCCCCCcEEeChHHhcceE
Confidence 2356542 468999999987 9999999999998 345798 46654321 11336999999999999
Q ss_pred EEEeCCCCEEeeecCC
Q 025328 228 VIYDNEKQRIGWKPED 243 (254)
Q Consensus 228 vvfD~~~~rIGfa~~~ 243 (254)
+|||++++|||||++.
T Consensus 355 ~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 355 TVFDRANNKVGLAPVA 370 (370)
T ss_dssp EEEETTTTEEEEEEBC
T ss_pred EEEECCCCEEEEEEcC
Confidence 9999999999999873
No 10
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=8e-40 Score=286.71 Aligned_cols=215 Identities=17% Similarity=0.332 Sum_probs=173.0
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCC------ChHHHHHHhCCc-cCeEEEEecCCC---cEEEEECCCCC--C
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI------SIVSQLREYGLI-RNVIGHCIGQNG---RGVLFLGDGKV--P 69 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~------s~~~ql~~~~~i-~~~Fs~~l~~~~---~G~l~fGg~~~--~ 69 (254)
+++|||++++.+.+ +.....+||||||++.+ +++.+|.++++| +++||+||.+.. .|.|+|||+|+ +
T Consensus 98 ~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~ 176 (329)
T 1htr_B 98 NQEFGLSENEPGTN-FVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLY 176 (329)
T ss_dssp EEEEEEESSCSSGG-GGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGE
T ss_pred ceEEEEEEEccccc-cccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHc
Confidence 57999999886642 13457899999999865 478899999998 899999998643 89999999984 4
Q ss_pred CCCceEEecccCCCCCCCeEEeeeEEEECCEEec--CCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCC
Q 025328 70 SSGVAWTPMLQNSADLKHYILGPAELLYSGKSCG--LKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDD 147 (254)
Q Consensus 70 ~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~--~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~ 147 (254)
.+++.|+|+... .+|.|.+++|+|+++.+. .....+||||||++++||+++|++|.+++.+... . ..
T Consensus 177 ~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~------~-~g 245 (329)
T 1htr_B 177 TGQIYWAPVTQE----LYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED------E-YG 245 (329)
T ss_dssp EEEEEEEEBCSS----SSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC------T-TS
T ss_pred CCceEEEECCCC----ceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCeec------C-CC
Confidence 689999999853 699999999999998865 2357899999999999999999999998854321 0 11
Q ss_pred CCCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEE-EEEcCCcC-CCCC-ceeeccceee
Q 025328 148 KTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCL-GILNGSEA-EVGE-NNIIGEIFMQ 224 (254)
Q Consensus 148 ~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~-~~~~-~~iLG~~f~~ 224 (254)
.....|+.. ..+|+|+|+|+| +.++|||++|++... + .|+ ++...+.. +... .||||+.|||
T Consensus 246 ~~~~~C~~~---------~~~P~i~f~f~g----~~~~i~~~~y~~~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~ 310 (329)
T 1htr_B 246 QFLVNCNSI---------QNLPSLTFIING----VEFPLPPSSYILSNN-G-YCTVGVEPTYLSSQNGQPLWILGDVFLR 310 (329)
T ss_dssp CEEECGGGG---------GGSCCEEEEETT----EEEEECHHHHEEECS-S-CEEESEEEECCCCTTSSCEEEECHHHHT
T ss_pred eEEEeCCCc---------ccCCcEEEEECC----EEEEECHHHhcccCC-C-EEEEEEEECCCCCCCCCceEEEChHHhc
Confidence 122357652 368999999977 999999999999875 3 898 57654311 1134 7999999999
Q ss_pred ceEEEEeCCCCEEeeecCC
Q 025328 225 DKMVIYDNEKQRIGWKPED 243 (254)
Q Consensus 225 ~~~vvfD~~~~rIGfa~~~ 243 (254)
++|+|||++++|||||+++
T Consensus 311 ~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 311 SYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp TEEEEEETTTTEEEEEEEC
T ss_pred cEEEEEECCCCEEEEEeCC
Confidence 9999999999999999863
No 11
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=4.8e-40 Score=289.56 Aligned_cols=214 Identities=19% Similarity=0.342 Sum_probs=172.4
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCC--------ChHHHHHHhCCc-cCeEEEEecC--CCcEEEEECCCCC--
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI--------SIVSQLREYGLI-RNVIGHCIGQ--NGRGVLFLGDGKV-- 68 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~--------s~~~ql~~~~~i-~~~Fs~~l~~--~~~G~l~fGg~~~-- 68 (254)
+++|||++++. ..+||||||++.+ +++.+|.++++| +++||+||.+ ...|.|+|||+|+
T Consensus 108 ~~~fg~~~~~~--------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~ 179 (342)
T 2qzx_A 108 DQLFANVWSTS--------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAK 179 (342)
T ss_dssp EEEEEEEEEEC--------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTS
T ss_pred ceEEEEEEecC--------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhh
Confidence 57999999762 4789999999764 789999999999 7999999985 4689999999974
Q ss_pred CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCC
Q 025328 69 PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDK 148 (254)
Q Consensus 69 ~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~ 148 (254)
+.+++.|+|+... .+|.|.+++|+|+++.+.. ...+||||||++++||+++|++|.+++.+.... .+.....
T Consensus 180 ~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~---~~~~~~~ 251 (342)
T 2qzx_A 180 YSGSLVDLPITSE----KKLTVGLRSVNVRGRNVDA-NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKF---DSAGNKV 251 (342)
T ss_dssp BSSCCEEEECCCS----SSCEEEEEEEEETTEEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE---CTTSCEE
T ss_pred EecceEEEeccCC----ceEEEEEeEEEECCEecCC-CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee---ccCCCcE
Confidence 5799999999864 5899999999999998864 578999999999999999999999998665421 0100001
Q ss_pred CCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeC-----CCceEEEEEcCCcCCCCCceeecccee
Q 025328 149 TLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISG-----RKNVCLGILNGSEAEVGENNIIGEIFM 223 (254)
Q Consensus 149 ~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~-----~~~~C~~~~~~~~~~~~~~~iLG~~f~ 223 (254)
+...|+. +|.|+|+|.+ +++++||+++|+++.. .+..|+..+... +.||||+.||
T Consensus 252 ~~~~C~~------------~p~i~f~f~~---g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~-----~~~iLG~~fl 311 (342)
T 2qzx_A 252 YVADCKT------------SGTIDFQFGN---NLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES-----EDNILGDNFL 311 (342)
T ss_dssp EEECTTC------------CCEEEEEETT---TEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC-----SSCEECHHHH
T ss_pred EEEECCC------------CCcEEEEECC---CcEEEEcHHHhcccccccCCCCCCccEEEEecC-----CCcEeChHhh
Confidence 1224532 6999999965 5999999999999742 236898633322 3599999999
Q ss_pred eceEEEEeCCCCEEeeecCCCCcccccC
Q 025328 224 QDKMVIYDNEKQRIGWKPEDCNTLLSLN 251 (254)
Q Consensus 224 ~~~~vvfD~~~~rIGfa~~~c~~~~~~~ 251 (254)
|++|+|||++++|||||+++|...+++.
T Consensus 312 ~~~y~vfD~~~~~igfA~~~~~~~~~i~ 339 (342)
T 2qzx_A 312 RSAYVVYNLDDKKISMAPVKYTSESDIV 339 (342)
T ss_dssp TTEEEEEETTTTEEEEEEBCCCSCCCEE
T ss_pred hcEEEEEECCCCEEEEEeeCCCCCCCeE
Confidence 9999999999999999999998766653
No 12
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=3.1e-40 Score=289.49 Aligned_cols=212 Identities=11% Similarity=0.155 Sum_probs=171.4
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCCC-------hHHHHHHhCCccCeEEEEecCC--C--cEEEEECCCCC--
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRIS-------IVSQLREYGLIRNVIGHCIGQN--G--RGVLFLGDGKV-- 68 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~s-------~~~ql~~~~~i~~~Fs~~l~~~--~--~G~l~fGg~~~-- 68 (254)
+++|||++++...| .....+||||||++.++ ++.+|.++++++++||+||.+. . .|.|+|||+|+
T Consensus 102 ~~~fg~~~~~~~~f--~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~ 179 (330)
T 1yg9_A 102 QQDIVLADELSQEV--CILSADVVVGIAAPGCPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKY 179 (330)
T ss_dssp EEEEEEEEEECTHH--HHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGG
T ss_pred CeEEEEEEEccccc--ccccCceEEEcCcchhccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHH
Confidence 57899999883323 23468999999998766 8899999987799999999854 2 89999999984
Q ss_pred CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCC-
Q 025328 69 PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDD- 147 (254)
Q Consensus 69 ~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~- 147 (254)
+.+++.|+|+.. +.+|.|.+++|+|+++.+......+||||||++++||++++++|.+++.+... .. ..
T Consensus 180 ~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~-g~~ 249 (330)
T 1yg9_A 180 VDGEFTYVPLVG----DDSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE-----KT-TTR 249 (330)
T ss_dssp EEEEEEEEEBSC----TTSCCEECSEEEETTEEEECTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE-----EC-SSC
T ss_pred ccCceEEEECCC----CCEEEEEeCeEEECCEEEcCCCcEEEEecCCccccCCHHHHHHHHHHhCCccc-----CC-Cce
Confidence 578999999984 37999999999999988754467999999999999999999999998854321 10 10
Q ss_pred CC-CCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEE-EEEcCCcCCCCCceeeccceeec
Q 025328 148 KT-LPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCL-GILNGSEAEVGENNIIGEIFMQD 225 (254)
Q Consensus 148 ~~-~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~~iLG~~f~~~ 225 (254)
.+ ...|+. + ..+|+|+|+|+| ++++||+++|++.. +..|+ ++...+ ..+.||||++|||+
T Consensus 250 ~~~~~~C~~--------~-~~~p~i~f~fgg----~~~~l~~~~y~~~~--~~~C~~~i~~~~---~~~~~ilG~~fl~~ 311 (330)
T 1yg9_A 250 RICKLDCSK--------I-PSLPDVTFVING----RNFNISSQYYIQQN--GNLCYSGFQPCG---HSDHFFIGDFFVDH 311 (330)
T ss_dssp EEEEECGGG--------G-GGSCCEEEEETT----EEEEECHHHHEEEE--TTEEEESEEEET---TCSSEEECHHHHTT
T ss_pred EEEEEECCC--------c-cccCcEEEEECC----EEEEECHHHhcccC--CCcEEEEEEeCC---CCCeEEecHHHhhh
Confidence 11 224654 2 368999999976 99999999999987 56898 566542 14579999999999
Q ss_pred eEEEEeCCCCEEeeecCC
Q 025328 226 KMVIYDNEKQRIGWKPED 243 (254)
Q Consensus 226 ~~vvfD~~~~rIGfa~~~ 243 (254)
+|+|||++++|||||+++
T Consensus 312 ~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 312 YYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCEEEEEECC
Confidence 999999999999999864
No 13
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=294.71 Aligned_cols=215 Identities=13% Similarity=0.211 Sum_probs=173.4
Q ss_pred eEEeeccCCCCCCCCCCCCcceEeecCCCCCC------hHHHHHHhCCc-cCeEEEEecCC------CcEEEEECCCCC-
Q 025328 3 SFCSCGYNQHNPGPLSPPDTAGVLGLGRGRIS------IVSQLREYGLI-RNVIGHCIGQN------GRGVLFLGDGKV- 68 (254)
Q Consensus 3 ~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~s------~~~ql~~~~~i-~~~Fs~~l~~~------~~G~l~fGg~~~- 68 (254)
++|||++++.+.. +.....|||||||++.++ ++.+|.+++++ +++||+||.+. .+|+|+|||+|+
T Consensus 149 ~~Fg~a~~~~g~~-f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~ 227 (383)
T 2x0b_A 149 QMFGEVTEMPALP-FMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQ 227 (383)
T ss_dssp EEEEEEEECCHHH-HTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGG
T ss_pred EEEEEEEecCCcc-cccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChH
Confidence 5899999886532 124578999999998764 67889999999 79999999853 389999999984
Q ss_pred -CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecC-CCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCC
Q 025328 69 -PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPD 146 (254)
Q Consensus 69 -~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~-~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~ 146 (254)
+.+++.|+|+... .+|.|.+++|+|+++.+.. ....+|+||||+++++|++++++|.+++.+.. ..
T Consensus 228 ~y~G~l~~~pv~~~----~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~--------~~ 295 (383)
T 2x0b_A 228 HYEGNFHYINLIKT----GVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK--------RL 295 (383)
T ss_dssp GEEEEEEEEEBSST----TSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE--------CS
T ss_pred HcCCceEEEEcCCC----ceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc--------cC
Confidence 5789999999863 6999999999999987533 35799999999999999999999999885432 11
Q ss_pred CCCCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCC--CceEE-EEEcCCcC-CCCCceeeccce
Q 025328 147 DKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCL-GILNGSEA-EVGENNIIGEIF 222 (254)
Q Consensus 147 ~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~~-~~~~~~iLG~~f 222 (254)
..+...|+.. ..+|+|+|+|+| ..++|||++|+++... +..|+ +|...+.. +....||||++|
T Consensus 296 g~~~v~C~~~---------~~~P~i~f~~~g----~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~F 362 (383)
T 2x0b_A 296 FDYVVKCNEG---------PTLPDISFHLGG----KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATF 362 (383)
T ss_dssp SCEEEEGGGT---------TTCCCEEEEETT----EEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHH
T ss_pred CcEEEecccc---------ccCceEEEEECC----EEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHH
Confidence 2223458753 368999999987 9999999999997643 45898 57765321 124689999999
Q ss_pred eeceEEEEeCCCCEEeeecCC
Q 025328 223 MQDKMVIYDNEKQRIGWKPED 243 (254)
Q Consensus 223 ~~~~~vvfD~~~~rIGfa~~~ 243 (254)
||++|+|||++|+|||||+++
T Consensus 363 l~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 363 IRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp HTTEEEEEETTTTEEEEEEEC
T ss_pred hcceEEEEECCCCEEeEEEcC
Confidence 999999999999999999863
No 14
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.8e-39 Score=284.44 Aligned_cols=213 Identities=17% Similarity=0.214 Sum_probs=172.0
Q ss_pred ceEEeeccCCCC-CCCCCCCCcceEeecCCCCCC------hHHHHHHhCCc-cCeEEEEecCC-----CcEEEEECCCCC
Q 025328 2 LSFCSCGYNQHN-PGPLSPPDTAGVLGLGRGRIS------IVSQLREYGLI-RNVIGHCIGQN-----GRGVLFLGDGKV 68 (254)
Q Consensus 2 ~~~fGc~~~~~~-~~~~~~~~~dGIlGLg~~~~s------~~~ql~~~~~i-~~~Fs~~l~~~-----~~G~l~fGg~~~ 68 (254)
+++|||++++.+ .| .....+||||||++.++ +..+|.++++| +++||+||.+. .+|.|+|||+|+
T Consensus 99 ~~~fg~~~~~~~~~f--~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~ 176 (329)
T 1dpj_A 99 KQDFAEATSEPGLTF--AFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDE 176 (329)
T ss_dssp EEEEEEEEECCHHHH--TTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCG
T ss_pred CeEEEEEEecCcccc--ccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCCh
Confidence 578999998765 22 23568999999998764 45789999988 79999999753 379999999984
Q ss_pred --CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCC
Q 025328 69 --PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPD 146 (254)
Q Consensus 69 --~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~ 146 (254)
+.+++.|+|+... .+|.|.+++|+|+++.+......+||||||++++||++++++|.+++.+... .
T Consensus 177 ~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~--------~ 244 (329)
T 1dpj_A 177 SKFKGDITWLPVRRK----AYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPSGLAEMINAEIGAKKG--------W 244 (329)
T ss_dssp GGEEEEEEEEECSSB----TTBEEEEEEEEETTEEEECSSCEEEECTTCSCEEECHHHHHHHHHHHTCEEC--------T
T ss_pred hhcCCceEEEEcCCC----ceEEEEeeeEEECCeEecCCCccEEeeCCCCcEECCHHHHHHHHHHhCCccC--------C
Confidence 5789999999753 6999999999999998876678999999999999999999999998854311 1
Q ss_pred CCCC-CcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEE-EEEcCCcC-CCCCceeecccee
Q 025328 147 DKTL-PICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCL-GILNGSEA-EVGENNIIGEIFM 223 (254)
Q Consensus 147 ~~~~-~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~-~~~~~~iLG~~f~ 223 (254)
...+ ..|... ..+|+|+|+|+| ..++|||++|+++.. ..|+ ++...+.. +..+.||||++||
T Consensus 245 ~g~~~~~C~~~---------~~~P~i~f~f~g----~~~~i~~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl 309 (329)
T 1dpj_A 245 TGQYTLDCNTR---------DNLPDLIFNFNG----YNFTIGPYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFL 309 (329)
T ss_dssp TSSEEECGGGG---------GGCCCEEEEETT----EEEEECTTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHH
T ss_pred CCeEEEECCCC---------CcCCcEEEEECC----EEEEECHHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHh
Confidence 1111 246431 468999999998 899999999999864 5898 57654311 1246899999999
Q ss_pred eceEEEEeCCCCEEeeecCC
Q 025328 224 QDKMVIYDNEKQRIGWKPED 243 (254)
Q Consensus 224 ~~~~vvfD~~~~rIGfa~~~ 243 (254)
|++|+|||++++|||||+++
T Consensus 310 ~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 310 RKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp TTEEEEEETTTTEEEEEEEC
T ss_pred cceEEEEECCCCEEEEEECC
Confidence 99999999999999999864
No 15
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.7e-39 Score=284.24 Aligned_cols=210 Identities=18% Similarity=0.275 Sum_probs=170.4
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCC-------ChHHHHHHhCCc-cCeEEEEec---CCCcEEEEECCCCC--
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI-------SIVSQLREYGLI-RNVIGHCIG---QNGRGVLFLGDGKV-- 68 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~-------s~~~ql~~~~~i-~~~Fs~~l~---~~~~G~l~fGg~~~-- 68 (254)
+++|||++++++.|. ....+||||||++.+ +++.+|.++|+| +++||+||. ....|.|+|||+|+
T Consensus 101 ~~~fg~~~~~~~~f~--~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~ 178 (325)
T 2apr_A 101 GQTIELAKREAASFA--SGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTK 178 (325)
T ss_dssp EEEEEEEEEECHHHH--TSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGG
T ss_pred cEEEEEEeccCcccc--cCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchh
Confidence 578999998766542 235899999998764 478999999988 899999995 34689999999984
Q ss_pred CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCC
Q 025328 69 PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDK 148 (254)
Q Consensus 69 ~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~ 148 (254)
+.+++.|+|+... ..+|.|.+++|+|++ .+......+||||||++++||+++|+++++++.+.+... ..
T Consensus 179 ~~g~l~~~p~~~~---~~~~~v~l~~i~vg~-~~~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~-------g~ 247 (325)
T 2apr_A 179 FKGSLTTVPIDNS---RGWWGITVDRATVGT-STVASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD-------GT 247 (325)
T ss_dssp BCSCCEEEECBCT---TSSCEEEECEEEETT-EEEECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS-------SC
T ss_pred ccCceEEEEccCC---CCEEEEEEeEEEECC-EecCCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC-------Ce
Confidence 5799999999754 379999999999999 444446799999999999999999999999987654421 11
Q ss_pred CCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEEE-EEcCCcCCCCCceeeccceeeceE
Q 025328 149 TLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLG-ILNGSEAEVGENNIIGEIFMQDKM 227 (254)
Q Consensus 149 ~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~~-~~~~~~~~~~~~~iLG~~f~~~~~ 227 (254)
....|+. ..+|+|+|+|+| .+++||+++|++... +..|++ +...+ .+.||||+.|||++|
T Consensus 248 ~~~~C~~----------~~~p~i~f~f~g----~~~~ip~~~~~~~~~-~~~C~~~i~~~~----~~~~iLG~~fl~~~y 308 (325)
T 2apr_A 248 YTISCDT----------SAFKPLVFSING----ASFQVSPDSLVFEEF-QGQCIAGFGYGN----WGFAIIGDTFLKNNY 308 (325)
T ss_dssp EEECSCG----------GGCCCEEEEETT----EEEEECGGGGEEEEE-TTEEEESEEEES----SSSEEECHHHHTTEE
T ss_pred EEEECCC----------CCCCcEEEEECC----EEEEECHHHEEEcCC-CCeEEEEEEcCC----CCCEEECHHHhcceE
Confidence 1224653 248999999998 599999999998654 668986 44433 357999999999999
Q ss_pred EEEeCCCCEEeeecCC
Q 025328 228 VIYDNEKQRIGWKPED 243 (254)
Q Consensus 228 vvfD~~~~rIGfa~~~ 243 (254)
+|||++++|||||++.
T Consensus 309 ~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 309 VVFNQGVPEVQIAPVA 324 (325)
T ss_dssp EEEETTTTEEEEEEBC
T ss_pred EEEECCCCEEEEEecC
Confidence 9999999999999864
No 16
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=288.71 Aligned_cols=233 Identities=20% Similarity=0.315 Sum_probs=178.2
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCC--------ChHHHHHHhCCccCeEEEEecC---------CCcEEEEEC
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI--------SIVSQLREYGLIRNVIGHCIGQ---------NGRGVLFLG 64 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~--------s~~~ql~~~~~i~~~Fs~~l~~---------~~~G~l~fG 64 (254)
++.|||.++..+.|. .....+||||||++.+ +++.+|.+|+.++++||+||.+ ...|.|+||
T Consensus 97 ~~~~~~~~~~~~~~~-~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fG 175 (383)
T 2ewy_A 97 LVNIATIFESENFFL-PGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLG 175 (383)
T ss_dssp EEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEET
T ss_pred EEEEEEEEeecceee-ccCcCceEEecCchhcccccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeC
Confidence 357899876655542 2346899999998764 4667898888778899999852 358999999
Q ss_pred CCCC--CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecCC-----CCeEEEecCCccEEeChHHHHHHHHHHHHHhc
Q 025328 65 DGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK-----DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLI 137 (254)
Q Consensus 65 g~~~--~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~-----~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~ 137 (254)
|+|. +.+++.|+|+... .+|.|.+++|+|+++.+.++ ...+||||||++++||+++|++|.+++.+...
T Consensus 176 g~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~ 251 (383)
T 2ewy_A 176 GIEPSLYKGDIWYTPIKEE----WYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASL 251 (383)
T ss_dssp SCCGGGCCSCEEEEECSSB----TTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC
T ss_pred ccchhhccCccEEEecCCC----ceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcc
Confidence 9984 6799999999863 68999999999999988653 36899999999999999999999999987653
Q ss_pred CCCCccCCC---CCCCCcccCCCCCCcccccccCCcEEEEEccCC--cceEEEecCCceEEEeC---CCceEEEEEcCCc
Q 025328 138 GTPLKLAPD---DKTLPICWRGPFKALGQVTEYFKPLALSFTNRR--NSVRLVVPPEAYLVISG---RKNVCLGILNGSE 209 (254)
Q Consensus 138 ~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~--~~~~~~i~~~~y~~~~~---~~~~C~~~~~~~~ 209 (254)
. ++... ......|+..... ....+|+|+|+|++.. .+++++|||++|+.+.. .+..|+++.....
T Consensus 252 ~---~~~~~~~~~~~~~~C~~~~~~----~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~ 324 (383)
T 2ewy_A 252 I---PEFSDGFWTGSQLACWTNSET----PWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS 324 (383)
T ss_dssp S---SCCCHHHHHTSEEEEECSSSC----GGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE
T ss_pred c---ccCccccccccccccccCCcc----cHhhCCcEEEEECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCC
Confidence 1 11110 0123469864211 1246899999999832 12589999999999763 3568986421111
Q ss_pred CCCCCceeeccceeeceEEEEeCCCCEEeeecCCCCcccc
Q 025328 210 AEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLS 249 (254)
Q Consensus 210 ~~~~~~~iLG~~f~~~~~vvfD~~~~rIGfa~~~c~~~~~ 249 (254)
...||||++|||++|+|||++++|||||+++|+...+
T Consensus 325 ---~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 361 (383)
T 2ewy_A 325 ---TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAG 361 (383)
T ss_dssp ---SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCBSSS
T ss_pred ---CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCCcCC
Confidence 3479999999999999999999999999999986543
No 17
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=6.6e-40 Score=286.57 Aligned_cols=212 Identities=15% Similarity=0.245 Sum_probs=170.8
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCC------ChHHHHHHhCCc-cCeEEEEecCC-CcEEEEECCCCC--CCC
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI------SIVSQLREYGLI-RNVIGHCIGQN-GRGVLFLGDGKV--PSS 71 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~------s~~~ql~~~~~i-~~~Fs~~l~~~-~~G~l~fGg~~~--~~~ 71 (254)
+++|||++++.+.. +.....+||||||++.+ +++.+|.++++| +++||+||.+. ..|.|+|||+|+ +.+
T Consensus 100 ~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g 178 (323)
T 3cms_A 100 QQTVGLSTQEPGDF-FTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTG 178 (323)
T ss_dssp EEEEEEEEECCSHH-HHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEE
T ss_pred ccEEEEEEeccccc-ccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccC
Confidence 57899999876521 11246899999998764 578899999998 89999999863 459999999984 468
Q ss_pred CceEEecccCCCCCCCeEEeeeEEEECCEEecCC-CCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCCCC
Q 025328 72 GVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK-DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTL 150 (254)
Q Consensus 72 ~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~-~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 150 (254)
++.|+|+... .+|.|.+++|+|+++.+..+ ...+||||||++++||++++++|.+++.+... ....+.
T Consensus 179 ~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-------~~g~~~ 247 (323)
T 3cms_A 179 SLHWVPVTVQ----QYWQFTVDSVTISGVVVACEGGCQAILDTGTSKLVGPSSDILNIQQAIGATQN-------QYGEFD 247 (323)
T ss_dssp EEEEEECSSB----TTBEEEEEEEEETTEEEESTTCEEEEECTTCCSEEECHHHHHHHHHHHTCEEE-------TTTEEE
T ss_pred ceEEEECccC----CeEEEEEeeEEECCEEeecCCCcEEEEecCCccEeCCHHHHHHHHHHhCCeec-------CCCcEE
Confidence 9999999853 69999999999999887543 56999999999999999999999998854321 011122
Q ss_pred CcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEE-EEEcCCcCCCCCceeeccceeeceEEE
Q 025328 151 PICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCL-GILNGSEAEVGENNIIGEIFMQDKMVI 229 (254)
Q Consensus 151 ~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~~iLG~~f~~~~~vv 229 (254)
..|+.. +.+|+|+|+|+| +.++|||++|++. .+..|+ ++...+. ...||||++|||++|+|
T Consensus 248 ~~C~~~---------~~~P~i~f~f~g----~~~~i~~~~y~~~--~~~~C~~~i~~~~~---~~~~iLG~~fl~~~y~v 309 (323)
T 3cms_A 248 IDCDNL---------SYMPTVVFEING----KMYPLTPSAYTSQ--DQGFCTSGFQSENH---SQKWILGDVFIREYYSV 309 (323)
T ss_dssp ECTTCT---------TTSCCEEEEETT----EEEEECHHHHEEE--ETTEEEESEEEC------CCEEECHHHHTTEEEE
T ss_pred EECCCC---------ccCceEEEEECC----EEEEECHHHhccC--CCCEEEEEEEeCCC---CCcEEECHHHhhceEEE
Confidence 357653 368999999987 9999999999998 356898 4776542 46899999999999999
Q ss_pred EeCCCCEEeeecCC
Q 025328 230 YDNEKQRIGWKPED 243 (254)
Q Consensus 230 fD~~~~rIGfa~~~ 243 (254)
||++++|||||+++
T Consensus 310 fD~~~~~igfA~~~ 323 (323)
T 3cms_A 310 FDRANNLVGLAKAI 323 (323)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCEEEEEECC
Confidence 99999999999864
No 18
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.7e-39 Score=284.18 Aligned_cols=214 Identities=13% Similarity=0.202 Sum_probs=168.8
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCCC---------hHHHHHHhCCccCeEEEEecCCCcEEEEECCCCC--CC
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRIS---------IVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKV--PS 70 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~s---------~~~ql~~~~~i~~~Fs~~l~~~~~G~l~fGg~~~--~~ 70 (254)
+++|||++++.+.+. .....+||||||++.++ ++.+|.++ +.+++||+||.++..|.|+|||+|+ +.
T Consensus 98 ~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~ 175 (325)
T 1ibq_A 98 KQAVEAASKISSEFV-QDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ-LDSPLFAVQLKHDAPGVYDFGYIDDSKYT 175 (325)
T ss_dssp EEEEEEEEEECHHHH-TSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG-SSSSEEEEEEETTEEEEEEESSCCGGGBS
T ss_pred ceEEEEEEecCcccc-ccCCCceEEEeCcccccccCcCCCCCHHHHHHHh-cCCcEEEEEecCCCCceEEECCcChhhcc
Confidence 578999998765442 22468999999987654 56888876 3389999999976799999999984 68
Q ss_pred CCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCCCC
Q 025328 71 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTL 150 (254)
Q Consensus 71 ~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 150 (254)
+++.|+|+... ..+|.|.+++|+|+++.+......+||||||++++||++++++|.+++..... ... .....
T Consensus 176 g~l~~~p~~~~---~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~----~~~-~g~~~ 247 (325)
T 1ibq_A 176 GSITYTDADSS---QGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE----SYE-AGGYV 247 (325)
T ss_dssp SCCEEEECBCT---TSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC----CSS-SSSCE
T ss_pred CceEEEEcCCC---CceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE----cCc-CCeEE
Confidence 99999999854 37899999999999987765567999999999999999999999877632111 000 11122
Q ss_pred CcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCC-C-ceEEE-EEcCCcCCCCCceeeccceeeceE
Q 025328 151 PICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR-K-NVCLG-ILNGSEAEVGENNIIGEIFMQDKM 227 (254)
Q Consensus 151 ~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~-~-~~C~~-~~~~~~~~~~~~~iLG~~f~~~~~ 227 (254)
..|+. .+|+|+|+|+| +.++||+++|++.... + ..|++ +..... .+.||||++|||++|
T Consensus 248 ~~C~~-----------~~P~i~f~fgg----~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~~---~~~~iLG~~fl~~~y 309 (325)
T 1ibq_A 248 FSCST-----------DLPDFTVVIGD----YKAVVPGKYINYAPVSTGSSTCYGGIQSNSG---LGLSILGDVFLKSQY 309 (325)
T ss_dssp EETTC-----------CCCCEEEEETT----EEEEECHHHHEEEESSTTCSEEEESEEECTT---TCSEEECHHHHTTEE
T ss_pred EEcCC-----------CCCcEEEEECC----EEEEECHHHhcccccCCCCCeEEEEEEcCCC---CCceEEChHHhcCEE
Confidence 35753 57999999976 9999999999987532 3 68986 655431 457999999999999
Q ss_pred EEEeCCCCEEeeecCC
Q 025328 228 VIYDNEKQRIGWKPED 243 (254)
Q Consensus 228 vvfD~~~~rIGfa~~~ 243 (254)
+|||++++|||||++.
T Consensus 310 ~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 310 VVFNSEGPKLGFAAQA 325 (325)
T ss_dssp EEEETTTTEEEEEEBC
T ss_pred EEEECCCCEEEeeeCC
Confidence 9999999999999863
No 19
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=6.4e-39 Score=288.15 Aligned_cols=234 Identities=17% Similarity=0.274 Sum_probs=181.0
Q ss_pred eEEeeccCCCCCCCCCCCCcceEeecCCCCC--------ChHHHHHHhCCccCeEEEEecC------------CCcEEEE
Q 025328 3 SFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI--------SIVSQLREYGLIRNVIGHCIGQ------------NGRGVLF 62 (254)
Q Consensus 3 ~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~--------s~~~ql~~~~~i~~~Fs~~l~~------------~~~G~l~ 62 (254)
+.|||++...+.+. .....+||||||++.+ +++.+|.++++|+++||+||.+ ...|.|+
T Consensus 113 ~~~~~~~~~~~~~~-~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~ 191 (402)
T 3vf3_A 113 ANIAAITESDKFFI-NGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMI 191 (402)
T ss_dssp EEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEE
T ss_pred eeEEEEEccccccc-cCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEE
Confidence 45889887765542 2356899999998753 5778999999998999999962 3489999
Q ss_pred ECCCCC--CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecCC-----CCeEEEecCCccEEeChHHHHHHHHHHHHH
Q 025328 63 LGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK-----DLTLIFDSGASYAYFTSRVYQEIVSLIMRD 135 (254)
Q Consensus 63 fGg~~~--~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~-----~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~ 135 (254)
|||+|. +.+++.|+|+... .+|.|.+++|+|+++.+.++ ...+||||||++++||++++++|.+++.+.
T Consensus 192 fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~ 267 (402)
T 3vf3_A 192 IGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAA 267 (402)
T ss_dssp ESSCCGGGEEEEEEEEECSSB----TTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHH
T ss_pred eCCcCcccccCceEEEeCCcC----cEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhh
Confidence 999984 5789999999863 68999999999999988753 468999999999999999999999999887
Q ss_pred hcCCCCccCCC---CCCCCcccCCCCCCcccccccCCcEEEEEccCC--cceEEEecCCceEEEeCCC----ceEEEEEc
Q 025328 136 LIGTPLKLAPD---DKTLPICWRGPFKALGQVTEYFKPLALSFTNRR--NSVRLVVPPEAYLVISGRK----NVCLGILN 206 (254)
Q Consensus 136 ~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~--~~~~~~i~~~~y~~~~~~~----~~C~~~~~ 206 (254)
... .+... ......|+..... ....+|+|+|+|++.. ..++++|+|++|++..... ..|+++..
T Consensus 268 ~~~---~~~~~~~~~~~~~~C~~~~~~----~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~ 340 (402)
T 3vf3_A 268 SST---EKFPDGFWLGEQLVCWQAGTT----PWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAI 340 (402)
T ss_dssp TTT---SCCCTTGGGTCSCEEEETTCC----CGGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECE
T ss_pred ccc---cccCccccccccccccccccc----hHhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEec
Confidence 541 11111 1124579864211 1246899999999842 1246999999999986532 48987432
Q ss_pred CCcCCCCCceeeccceeeceEEEEeCCCCEEeeecCCCCcccccC
Q 025328 207 GSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLN 251 (254)
Q Consensus 207 ~~~~~~~~~~iLG~~f~~~~~vvfD~~~~rIGfa~~~c~~~~~~~ 251 (254)
... .+.||||+.|||++|+|||++++|||||+++|+..++++
T Consensus 341 ~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~ 382 (402)
T 3vf3_A 341 SQS---STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFR 382 (402)
T ss_dssp EEE---SSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBCSSC
T ss_pred cCC---CCcEEEChHHhCCeEEEEECCCCEEEEEecccCcccCcc
Confidence 221 357999999999999999999999999999999887764
No 20
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.7e-39 Score=284.34 Aligned_cols=214 Identities=19% Similarity=0.297 Sum_probs=174.2
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCCC----------------hHHHHHHhCCc-cCeEEEEecCC--CcEEEE
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRIS----------------IVSQLREYGLI-RNVIGHCIGQN--GRGVLF 62 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~s----------------~~~ql~~~~~i-~~~Fs~~l~~~--~~G~l~ 62 (254)
+++|||++... ..+||||||++.++ ++.+|.++++| +++||+||.+. ..|.|+
T Consensus 102 ~~~fg~~~~~~--------~~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~ 173 (339)
T 3fv3_A 102 GQQIADVTQTS--------VDQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTII 173 (339)
T ss_dssp EEEEEEEEEES--------SSSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEE
T ss_pred ceEEEEEEecC--------CCceeEEecCccccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEE
Confidence 57899999873 25899999987643 88999999999 79999999853 589999
Q ss_pred ECCCCC--CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCC
Q 025328 63 LGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTP 140 (254)
Q Consensus 63 fGg~~~--~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~ 140 (254)
|||+|+ +.+++.|+|+... .+|.|.+++|+|+++.+.. ...++|||||++++||++++++|.+++.+.....
T Consensus 174 fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~-~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~- 247 (339)
T 3fv3_A 174 FGGVDNAKYSGKLVAEQVTSS----QALTISLASVNLKGSSFSF-GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQV- 247 (339)
T ss_dssp ETEEETTSBSSCCEEEEBCCS----SSCEEEEEEEEESSCEEEE-EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE-
T ss_pred EeeechHHeecceEEEecccC----ccEEEEEEEEEECCEeecC-CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc-
Confidence 999874 5799999999864 5899999999999988865 4789999999999999999999999997543210
Q ss_pred CccCCCCCCCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEE-EEEcCCcCCCCCceeec
Q 025328 141 LKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCL-GILNGSEAEVGENNIIG 219 (254)
Q Consensus 141 ~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~~iLG 219 (254)
. .....+...|+. ..+|.|+|+|++ +++++||+++|+++.. +..|+ ++.. . +.||||
T Consensus 248 -~-~~~~~~~~~C~~----------~~~p~i~f~f~~---g~~~~v~~~~~~~~~~-~~~C~~~i~~-~-----~~~ilG 305 (339)
T 3fv3_A 248 -A-RDQYLYFIDCNT----------DTSGTTVFNFGN---GAKITVPNTEYVYQNG-DGTCLWGIQP-S-----DDTILG 305 (339)
T ss_dssp -E-TTEEEEEECTTC----------CCCSEEEEEETT---SCEEEEEGGGGEEECS-SSCEEESEEE-C-----SSCEEC
T ss_pred -c-ccCceEEEecCC----------CCCCcEEEEECC---CCEEEECHHHheeeCC-CCeEEEEEEe-C-----CcEEeC
Confidence 0 001112235754 257999999975 4999999999999864 35685 6776 2 369999
Q ss_pred cceeeceEEEEeCCCCEEeeecCCCCcccccC
Q 025328 220 EIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLN 251 (254)
Q Consensus 220 ~~f~~~~~vvfD~~~~rIGfa~~~c~~~~~~~ 251 (254)
+.|||++|+|||++++|||||+++|++.+++.
T Consensus 306 ~~fl~~~y~vfD~~~~~igfA~~~~~~~s~i~ 337 (339)
T 3fv3_A 306 DNFLRHAYLLYNLDANTISIAQVKYTTDSSIS 337 (339)
T ss_dssp HHHHTTEEEEEETTTTEEEEEEBCCCSCCCEE
T ss_pred hHHHhCEEEEEECCCCEEEEEecCCCCccceE
Confidence 99999999999999999999999999766653
No 21
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=4.9e-39 Score=288.29 Aligned_cols=232 Identities=18% Similarity=0.288 Sum_probs=179.3
Q ss_pred eEEeeccCCCCCCCCCCCCcceEeecCCCCC--------ChHHHHHHhCCccCeEEEEecC------------CCcEEEE
Q 025328 3 SFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI--------SIVSQLREYGLIRNVIGHCIGQ------------NGRGVLF 62 (254)
Q Consensus 3 ~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~--------s~~~ql~~~~~i~~~Fs~~l~~------------~~~G~l~ 62 (254)
+.|||..+..+.|. .....+||||||++.+ +++.+|.++++++++||+||.+ ...|.|+
T Consensus 106 ~~~~~~~~~~~~f~-~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~ 184 (395)
T 2qp8_A 106 ANIAAITESDKFFI-NGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMI 184 (395)
T ss_dssp EEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEE
T ss_pred EEEEEEEccCcccc-cccCccceEEcCchhhccCCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEE
Confidence 56888876655542 2356899999998764 4677999999888899999963 2589999
Q ss_pred ECCCCC--CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecCC-----CCeEEEecCCccEEeChHHHHHHHHHHHHH
Q 025328 63 LGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK-----DLTLIFDSGASYAYFTSRVYQEIVSLIMRD 135 (254)
Q Consensus 63 fGg~~~--~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~-----~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~ 135 (254)
|||+|+ +.+++.|+|+... .+|.|.+++|+|+++.+.++ ...+||||||++++||+++|++|.+++...
T Consensus 185 fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~ 260 (395)
T 2qp8_A 185 IGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAA 260 (395)
T ss_dssp ETSCCGGGEEEEEEEEECCSB----TTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHH
T ss_pred ECCcCcccccCceEEeccCCC----ceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhh
Confidence 999984 5789999999763 69999999999999988653 368999999999999999999999999887
Q ss_pred hcCCCCccCCC---CCCCCcccCCCCCCcccccccCCcEEEEEccCC--cceEEEecCCceEEEeCC----CceEEE--E
Q 025328 136 LIGTPLKLAPD---DKTLPICWRGPFKALGQVTEYFKPLALSFTNRR--NSVRLVVPPEAYLVISGR----KNVCLG--I 204 (254)
Q Consensus 136 ~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~--~~~~~~i~~~~y~~~~~~----~~~C~~--~ 204 (254)
... .+... ......|+.... .....+|+|+|+|++.. ..++++|+|++|++.... ...|++ +
T Consensus 261 ~~~---~~~~~~~~~~~~~~C~~~~~----~~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i 333 (395)
T 2qp8_A 261 SST---EKFPDGFWLGEQLVCWQAGT----TPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAI 333 (395)
T ss_dssp TTT---SCCCHHHHTTCSCEEESTTC----CCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECE
T ss_pred ccc---ccCCcccccccccccccccc----chHhhCCcEEEEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEe
Confidence 542 11100 112357987521 11246899999999831 114799999999998643 248974 4
Q ss_pred EcCCcCCCCCceeeccceeeceEEEEeCCCCEEeeecCCCCcccccC
Q 025328 205 LNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLN 251 (254)
Q Consensus 205 ~~~~~~~~~~~~iLG~~f~~~~~vvfD~~~~rIGfa~~~c~~~~~~~ 251 (254)
... ...||||+.|||++|+|||++++|||||+++|+..++++
T Consensus 334 ~~~-----~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~ 375 (395)
T 2qp8_A 334 SQS-----STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFR 375 (395)
T ss_dssp EEE-----SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSC
T ss_pred cCC-----CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCCCCCCc
Confidence 432 357999999999999999999999999999999765543
No 22
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.6e-39 Score=283.59 Aligned_cols=212 Identities=16% Similarity=0.255 Sum_probs=172.0
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCC------ChHHHHHHhCCc-cCeEEEEecC-CCcEEEEECCCCC--CCC
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI------SIVSQLREYGLI-RNVIGHCIGQ-NGRGVLFLGDGKV--PSS 71 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~------s~~~ql~~~~~i-~~~Fs~~l~~-~~~G~l~fGg~~~--~~~ 71 (254)
+++|||++.+.+.. +.....+||||||++.+ ++..+|.++++| +++||+||.+ ...|.|+|||+|+ +.+
T Consensus 97 ~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g 175 (320)
T 4aa9_A 97 NQTVGLSTEQPGEV-FTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTG 175 (320)
T ss_dssp EEEEEEEEECCSHH-HHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEE
T ss_pred CeEEEEEEEccccc-ccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccC
Confidence 57899999886521 12346799999998753 578899999999 8999999997 3789999999984 578
Q ss_pred CceEEecccCCCCCCCeEEeeeEEEECCEEecCC-CCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCCCC
Q 025328 72 GVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK-DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTL 150 (254)
Q Consensus 72 ~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~-~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 150 (254)
++.|+|+... .+|.|.+++|+|+++.+..+ ...+||||||++++||++++++|.+++.+... ....+.
T Consensus 176 ~l~~~p~~~~----~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-------~~g~~~ 244 (320)
T 4aa9_A 176 SLHWVPVTLQ----QYWQFTVDSVTINGVAVACVGGCQAILDTGTSVLFGPSSDILKIQMAIGATEN-------RYGEFD 244 (320)
T ss_dssp EEEEEECSSB----TTBEEEECEEEETTEEEESTTCEEEEECTTCSSEEEEHHHHHHHHHHTTCEEC-------TTSCEE
T ss_pred ceEEEEcccC----CceEEEEeEEEECCEEeccCCCcEEEEECCCCcEECCHHHHHHHHHHhCCccc-------CCCcEE
Confidence 9999999753 79999999999999988653 56999999999999999999999988744321 011222
Q ss_pred CcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEE-EEEcCCcCCCCCceeeccceeeceEEE
Q 025328 151 PICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCL-GILNGSEAEVGENNIIGEIFMQDKMVI 229 (254)
Q Consensus 151 ~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~~iLG~~f~~~~~vv 229 (254)
..|... ..+|+|+|+|+| +.++||+++|+... +..|+ ++..... .+.||||+.|||++|+|
T Consensus 245 ~~C~~~---------~~~p~i~f~f~g----~~~~l~~~~y~~~~--~~~C~~~i~~~~~---~~~~ilG~~fl~~~y~v 306 (320)
T 4aa9_A 245 VNCGNL---------RSMPTVVFEING----RDYPLSPSAYTSKD--QGFCTSGFQGDNN---SELWILGDVFIREYYSV 306 (320)
T ss_dssp ECGGGG---------GGCCCEEEEETT----EEEEECHHHHEEEE--TTEEEESEEEETT---CCCEEECHHHHTTEEEE
T ss_pred EeCCCC---------CcCceEEEEECC----EEEEECHHHhccCC--CCeEEEEEEcCCC---CCcEEEChHHhcceEEE
Confidence 357542 368999999987 99999999999863 56898 5766432 35799999999999999
Q ss_pred EeCCCCEEeeecCC
Q 025328 230 YDNEKQRIGWKPED 243 (254)
Q Consensus 230 fD~~~~rIGfa~~~ 243 (254)
||++++|||||+++
T Consensus 307 fD~~~~~igfA~a~ 320 (320)
T 4aa9_A 307 FDRANNRVGLAKAI 320 (320)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCEEEEEecC
Confidence 99999999999864
No 23
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.4e-39 Score=284.92 Aligned_cols=213 Identities=16% Similarity=0.285 Sum_probs=171.3
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCC-------CChHHHHHHhCCc-cCeEEEEecC--CCcEEEEECCCCC--C
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGR-------ISIVSQLREYGLI-RNVIGHCIGQ--NGRGVLFLGDGKV--P 69 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~-------~s~~~ql~~~~~i-~~~Fs~~l~~--~~~G~l~fGg~~~--~ 69 (254)
+++|||++... ..+||||||++. .+++.+|.++++| +++||+||.+ ...|.|+|||+|+ +
T Consensus 108 ~~~fg~~~~~~--------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~ 179 (342)
T 3pvk_A 108 NQVLADVDSTS--------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKY 179 (342)
T ss_dssp EEEEEEEEEES--------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSB
T ss_pred ceEEEEEEccC--------CCccEEEecCccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccce
Confidence 57899998763 479999999986 4799999999999 7999999985 3589999999984 5
Q ss_pred CCCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCCC
Q 025328 70 SSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKT 149 (254)
Q Consensus 70 ~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 149 (254)
.+++.|+|+... .+|.|.+++|+|+++.+......+||||||++++||++++++|.+++....... ......+
T Consensus 180 ~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~ 252 (342)
T 3pvk_A 180 SGSLIALPVTSD----RELRISLGSVEVSGKTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD---SNGNSFY 252 (342)
T ss_dssp SSCCEEEECCCS----SSCEEEEEEEEETTEEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC---TTSCEEE
T ss_pred eeeeEEeecCcc----ceEEEEEeEEEECCEEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc---CCCceEE
Confidence 799999999864 589999999999999987655799999999999999999999999886544310 0000012
Q ss_pred CCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeC--CC---ceEEE-EEcCCcCCCCCceeecccee
Q 025328 150 LPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISG--RK---NVCLG-ILNGSEAEVGENNIIGEIFM 223 (254)
Q Consensus 150 ~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~--~~---~~C~~-~~~~~~~~~~~~~iLG~~f~ 223 (254)
...|+. .|+|+|+|++ +.+++||+++|+++.. ++ ..|+. +... +.||||+.||
T Consensus 253 ~~~C~~------------~p~i~f~f~~---g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~------~~~ilG~~fl 311 (342)
T 3pvk_A 253 EVDCNL------------SGDVVFNFSK---NAKISVPASEFAASLQGDDGQPYDKCQLLFDVN------DANILGDNFL 311 (342)
T ss_dssp EECSCC------------CSEEEEEEST---TCEEEEEGGGGEEC----------CEEESEEEC------TTCEECHHHH
T ss_pred EEecCC------------CCceEEEECC---CCEEEEcHHHheeeccccCCCcCCeeEEEEeeC------CCeEeCHHHH
Confidence 234543 4999999995 5899999999998632 22 67974 5442 4689999999
Q ss_pred eceEEEEeCCCCEEeeecCCCCccccc
Q 025328 224 QDKMVIYDNEKQRIGWKPEDCNTLLSL 250 (254)
Q Consensus 224 ~~~~vvfD~~~~rIGfa~~~c~~~~~~ 250 (254)
|++|+|||++++|||||+++|+..+++
T Consensus 312 ~~~y~vfD~~~~~igfA~~~~~~~s~i 338 (342)
T 3pvk_A 312 RSAYIVYDLDDNEISLAQVKYTSASSI 338 (342)
T ss_dssp TTEEEEEETTTTEEEEEEBCCCSCCCE
T ss_pred hcEEEEEECCCCEEEEEecCCCCCCCE
Confidence 999999999999999999999976654
No 24
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=9.4e-39 Score=291.34 Aligned_cols=233 Identities=17% Similarity=0.275 Sum_probs=183.1
Q ss_pred eEEeeccCCCCCCCCCCCCcceEeecCCCCC--------ChHHHHHHhCCccCeEEEEecC------------CCcEEEE
Q 025328 3 SFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI--------SIVSQLREYGLIRNVIGHCIGQ------------NGRGVLF 62 (254)
Q Consensus 3 ~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~--------s~~~ql~~~~~i~~~Fs~~l~~------------~~~G~l~ 62 (254)
+.|||+++..+.|. .....+||||||++.+ +++.+|.++++|+++||+||.+ ...|.|+
T Consensus 159 ~~~~~~~~~~~~~~-~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~ 237 (455)
T 3lpj_A 159 ANIAAITESDKFFI-NGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMI 237 (455)
T ss_dssp EEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEE
T ss_pred EEEEEEEccCcccc-cCCCcceEEEeCccccccccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEE
Confidence 46899887765542 2356899999998754 5778999999998999999962 3589999
Q ss_pred ECCCCC--CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecCC-----CCeEEEecCCccEEeChHHHHHHHHHHHHH
Q 025328 63 LGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK-----DLTLIFDSGASYAYFTSRVYQEIVSLIMRD 135 (254)
Q Consensus 63 fGg~~~--~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~-----~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~ 135 (254)
|||+|. +.+++.|+|+... .+|.|.+++|+|+++.+.++ ...+||||||++++||++++++|.+++...
T Consensus 238 fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~ 313 (455)
T 3lpj_A 238 IGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAA 313 (455)
T ss_dssp ETSCCGGGEEEEEEEEECCSB----TTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHH
T ss_pred ECCcCcccccCceEEEecCCC----ceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhh
Confidence 999984 5789999999863 69999999999999988653 468999999999999999999999999887
Q ss_pred hcCCCCccCCC---CCCCCcccCCCCCCcccccccCCcEEEEEccCC--cceEEEecCCceEEEeCCC----ceEEEEEc
Q 025328 136 LIGTPLKLAPD---DKTLPICWRGPFKALGQVTEYFKPLALSFTNRR--NSVRLVVPPEAYLVISGRK----NVCLGILN 206 (254)
Q Consensus 136 ~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~--~~~~~~i~~~~y~~~~~~~----~~C~~~~~ 206 (254)
... ++... ......|+..... ....+|+|+|+|++.. ..++++|+|++|++..... ..|+++..
T Consensus 314 ~~~---~~~~~~~~~g~~~~C~~~~~~----~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~ 386 (455)
T 3lpj_A 314 SST---EKFPDGFWLGEQLVCWQAGTT----PWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAI 386 (455)
T ss_dssp TTT---SCCCHHHHTTCSCEEESTTCC----CGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECE
T ss_pred ccc---cccCcccccCcceecccccCC----chhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEec
Confidence 542 11110 1224679875311 1246899999999832 1236999999999987532 48997432
Q ss_pred CCcCCCCCceeeccceeeceEEEEeCCCCEEeeecCCCCccccc
Q 025328 207 GSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSL 250 (254)
Q Consensus 207 ~~~~~~~~~~iLG~~f~~~~~vvfD~~~~rIGfa~~~c~~~~~~ 250 (254)
... .+.||||+.|||++|+|||++++|||||+++|+..+++
T Consensus 387 ~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~ 427 (455)
T 3lpj_A 387 SQS---STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEF 427 (455)
T ss_dssp EEE---SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSS
T ss_pred cCC---CCcEEEChHHhCCeEEEEECCCCEEEEEeccccccccc
Confidence 221 35799999999999999999999999999999988754
No 25
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.2e-39 Score=283.33 Aligned_cols=212 Identities=13% Similarity=0.198 Sum_probs=167.3
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCCC---------hHHHHHHhCCccCeEEEEecCCCcEEEEECCCCC--CC
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRIS---------IVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKV--PS 70 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~s---------~~~ql~~~~~i~~~Fs~~l~~~~~G~l~fGg~~~--~~ 70 (254)
+++|||++++.+.+. .....+||||||++.++ +..+|.++ +-+++||+||.++..|.|+|||+|+ +.
T Consensus 99 ~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~ 176 (323)
T 1izd_A 99 SQAVESAEKVSSEFT-QDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS-LSEPIFAVALKHNAPGVYDFGYTDSSKYT 176 (323)
T ss_dssp EEEEEEEEEECHHHH-HCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG-SSSSEEEEECCTTSCEEEEESSCCTTSEE
T ss_pred ceEEEEEEecccccc-ccCCCceEEecCcccccccCCCCCCCHHHHHHHh-ccCcEEEEEccCCCCCEEEECCcCccccc
Confidence 578999998765432 12467999999987543 56888876 3389999999976799999999985 46
Q ss_pred CCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCCCC
Q 025328 71 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTL 150 (254)
Q Consensus 71 ~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 150 (254)
+++.|+|+... ..+|.|.+++|+|++ .+......+||||||++++||++++++|.+++..... ... ...+.
T Consensus 177 g~l~~~p~~~~---~~~w~v~l~~i~v~~-~~~~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~----~~~-~g~~~ 247 (323)
T 1izd_A 177 GSITYTDVDNS---QGFWGFTADGYSIGS-DSSSDSITGIADTGTTLLLLDDSIVDAYYEQVNGASY----DSS-QGGYV 247 (323)
T ss_dssp EEEEEEECBCT---TSSCEEEESEEEETT-EEECCCEEEEECTTCCSEEECHHHHHHHHTTSTTCEE----ETT-TTEEE
T ss_pred cceEEEECCCC---CceEEEEECeEEECC-cccCCCceEEEeCCCcceeCCHHHHHHHHHhCCCcEE----cCc-CCEEE
Confidence 89999999854 379999999999999 6654567999999999999999999999877632111 000 11112
Q ss_pred CcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCCCceEEE-EEcCCcCCCCCceeeccceeeceEEE
Q 025328 151 PICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLG-ILNGSEAEVGENNIIGEIFMQDKMVI 229 (254)
Q Consensus 151 ~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~~~~C~~-~~~~~~~~~~~~~iLG~~f~~~~~vv 229 (254)
..|+. .+|+|+|+|+| ++++||+++|++....+..|++ +...+. .+.||||++|||++|+|
T Consensus 248 ~~C~~-----------~~P~i~f~fgg----~~~~i~~~~~~~~~~~~~~C~~~i~~~~~---~~~~IlG~~fl~~~y~v 309 (323)
T 1izd_A 248 FPSSA-----------SLPDFSVTIGD----YTATVPGEYISFADVGNGQTFGGIQSNSG---IGFSIFGDVFLKSQYVV 309 (323)
T ss_dssp EETTC-----------CCCCEEEEETT----EEEEECHHHHEEEECSTTEEEESEEECTT---TSSEEECHHHHTTEEEE
T ss_pred EECCC-----------CCceEEEEECC----EEEecCHHHeEEecCCCCeEEEEEEcCCC---CCcEEEChHHhcCEEEE
Confidence 24653 57999999976 9999999999987655678986 665432 46899999999999999
Q ss_pred EeCCCCEEeeecC
Q 025328 230 YDNEKQRIGWKPE 242 (254)
Q Consensus 230 fD~~~~rIGfa~~ 242 (254)
||++++|||||++
T Consensus 310 fD~~~~riGfA~~ 322 (323)
T 1izd_A 310 FDASGPRLGFAAQ 322 (323)
T ss_dssp EETTTTEEEEEEE
T ss_pred EECCCCEEEEeeC
Confidence 9999999999986
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=7.3e-39 Score=281.78 Aligned_cols=221 Identities=14% Similarity=0.171 Sum_probs=172.2
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCC--------------ChHHHHHHhCCc-cCeEEEEecC-----CCcEEE
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI--------------SIVSQLREYGLI-RNVIGHCIGQ-----NGRGVL 61 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~--------------s~~~ql~~~~~i-~~~Fs~~l~~-----~~~G~l 61 (254)
+++|||++++.+ + ...+||||||++.+ +++.+|.++++| +++||+||.+ ...|.|
T Consensus 86 ~~~fg~~~~~~~-~----~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l 160 (340)
T 1wkr_A 86 KQSIGVASRDSG-F----DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGEL 160 (340)
T ss_dssp EEEEEEEEEEES-C----TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEE
T ss_pred ceEEEEEEccCC-C----cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEE
Confidence 578999998765 3 25899999998754 457889999999 7999999984 247999
Q ss_pred EECCCCC--CCCCceEEecccCCCCCCCeEEeeeEEEECC-EEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcC
Q 025328 62 FLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSG-KSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIG 138 (254)
Q Consensus 62 ~fGg~~~--~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~-~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~ 138 (254)
+|||+|+ +.+++.|+|+........+|.|. .+|+|++ +.+.. +..+||||||++++||++++++|.+++.+....
T Consensus 161 ~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~ 238 (340)
T 1wkr_A 161 TFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSILS-STAGIVDTGTTLTLIASDAFAKYKKATGAVADN 238 (340)
T ss_dssp EESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEEE-EEEEEECTTBCSEEECHHHHHHHHHHHTCEECT
T ss_pred EEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEccC-CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcC
Confidence 9999984 68999999998864334799999 9999998 87743 568999999999999999999998877543221
Q ss_pred CCCccCCCCCCCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeC-------CCceEE-EEEcCCcC
Q 025328 139 TPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISG-------RKNVCL-GILNGSEA 210 (254)
Q Consensus 139 ~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~-------~~~~C~-~~~~~~~~ 210 (254)
. .......|.. . ..+|+|+|+|+| ..++|+|++|+++.. ....|+ ++......
T Consensus 239 -----~-~g~~~~~C~~--------~-~~~p~i~f~f~g----~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~ 299 (340)
T 1wkr_A 239 -----N-TGLLRLTTAQ--------Y-ANLQSLFFTIGG----QTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSD 299 (340)
T ss_dssp -----T-TSSEEECHHH--------H-HTCCCEEEEETT----EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSC
T ss_pred -----C-CCeEEeeccc--------c-ccCCcEEEEECC----EEEEEcHHHhccccccccccCCCCceEEEEEecCCCC
Confidence 0 0111224543 1 368999999988 899999999998643 124675 56543211
Q ss_pred -CCCCceeeccceeeceEEEEeCCCCEEeeecCCCCccc
Q 025328 211 -EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLL 248 (254)
Q Consensus 211 -~~~~~~iLG~~f~~~~~vvfD~~~~rIGfa~~~c~~~~ 248 (254)
+.+..||||++|||++|+|||++++|||||+++|+..+
T Consensus 300 ~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 338 (340)
T 1wkr_A 300 SGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTAT 338 (340)
T ss_dssp TTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTCC
T ss_pred CCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCCC
Confidence 12346999999999999999999999999999998744
No 27
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=4.7e-39 Score=282.94 Aligned_cols=215 Identities=13% Similarity=0.206 Sum_probs=173.6
Q ss_pred ceEEeeccCCCCC-CCCCCCCcceEeecCCCCCC------hHHHHHHhCCc-cCeEEEEecCCC------cEEEEECCCC
Q 025328 2 LSFCSCGYNQHNP-GPLSPPDTAGVLGLGRGRIS------IVSQLREYGLI-RNVIGHCIGQNG------RGVLFLGDGK 67 (254)
Q Consensus 2 ~~~fGc~~~~~~~-~~~~~~~~dGIlGLg~~~~s------~~~ql~~~~~i-~~~Fs~~l~~~~------~G~l~fGg~~ 67 (254)
+++|||++++.+. + .....+||||||++.++ ++.+|.++++| +++||+||.+.. .|.|+|||+|
T Consensus 105 ~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d 182 (341)
T 3k1w_A 105 TQMFGEVTEMPALPF--MLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSD 182 (341)
T ss_dssp EEEEEEEEECCHHHH--TTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCC
T ss_pred eEEEEEEEEcccccc--ccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccC
Confidence 4789999988654 2 24568999999998754 78999999999 799999998643 8999999998
Q ss_pred C--CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecC-CCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccC
Q 025328 68 V--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLA 144 (254)
Q Consensus 68 ~--~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~-~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~ 144 (254)
+ +.+++.|+|+... .+|.|.+++|+|+++.+.. ....+||||||++++||++++++|.+++.+...
T Consensus 183 ~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~------- 251 (341)
T 3k1w_A 183 PQHYEGNFHYINLIKT----GVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKR------- 251 (341)
T ss_dssp GGGEEEEEEEEECSST----TSCEEEECCEEETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-------
T ss_pred hHHccCceEEEecCCC----CEEEEEEeEEEECCEEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec-------
Confidence 4 5789999999853 7999999999999987543 357999999999999999999999998854321
Q ss_pred CCCCCCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCC--CceEE-EEEcCCc-CCCCCceeecc
Q 025328 145 PDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCL-GILNGSE-AEVGENNIIGE 220 (254)
Q Consensus 145 ~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~-~~~~~~~iLG~ 220 (254)
...+...|... ..+|+|+|+|+| ++++||+++|++.... +..|+ ++...+. ......||||+
T Consensus 252 -~~g~~~~C~~~---------~~~p~i~f~f~g----~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~ 317 (341)
T 3k1w_A 252 -LFDYVVKCNEG---------PTLPDISFHLGG----KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGA 317 (341)
T ss_dssp -SSCEEEEGGGG---------GGCCCEEEEETT----EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECH
T ss_pred -CCCeEEeCCCC---------CcCCcEEEEECC----EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEECh
Confidence 11222346542 368999999998 9999999999987542 57898 5765421 11246899999
Q ss_pred ceeeceEEEEeCCCCEEeeecCC
Q 025328 221 IFMQDKMVIYDNEKQRIGWKPED 243 (254)
Q Consensus 221 ~f~~~~~vvfD~~~~rIGfa~~~ 243 (254)
.|||++|+|||++++|||||+++
T Consensus 318 ~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 318 TFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp HHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHhcceEEEEeCCCCEEEEEECC
Confidence 99999999999999999999975
No 28
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=4.7e-39 Score=281.23 Aligned_cols=211 Identities=15% Similarity=0.222 Sum_probs=165.5
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCC---------ChHHHHHHhCCccCeEEEEecCCCcEEEEECCCCC--CC
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRI---------SIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKV--PS 70 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~---------s~~~ql~~~~~i~~~Fs~~l~~~~~G~l~fGg~~~--~~ 70 (254)
+++|||++++++.+. .....+||||||++.+ ++..+|.++ +-+++||+||.++..|.|+|||+|+ +.
T Consensus 99 ~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~ 176 (323)
T 1bxo_A 99 GQAVQAAQQISAQFQ-QDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS-LAQPLFAVALKHQQPGVYDFGFIDSSKYT 176 (323)
T ss_dssp EEEEEEEEEECHHHH-TCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG-BSSSEEEEECCSSSCEEEEESSCCGGGBS
T ss_pred cEEEEEEEecCcccc-cCCCCceEEEeCcccccccccCCCCCHHHHHHHh-cCCcEEEEEEeCCCCceEEEeCcChhhcc
Confidence 578999998765442 2246899999998754 467888876 3389999999976799999999984 68
Q ss_pred CCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCCCC
Q 025328 71 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTL 150 (254)
Q Consensus 71 ~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 150 (254)
+++.|+|+... ..+|.|.+++|+|++ +......+||||||++++||++++++|.+++..... ... .....
T Consensus 177 g~l~~~p~~~~---~~~w~v~l~~i~v~~--~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~----~~~-~g~~~ 246 (323)
T 1bxo_A 177 GSLTYTGVDNS---QGFWSFNVDSYTAGS--QSGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ----DSN-AGGYV 246 (323)
T ss_dssp SCCEEEECBCT---TSSCEEEEEEEEETT--EEEEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE----ETT-TTEEE
T ss_pred CceEEEECCCC---CCeEEEEEeeEEECC--ccCCCceEEEeCCCCceeCCHHHHHHHHHhCCCceE----cCc-CCEEE
Confidence 99999999754 378999999999999 322357899999999999999999999877632211 000 11112
Q ss_pred CcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCC-CceEEE-EEcCCcCCCCCceeeccceeeceEE
Q 025328 151 PICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR-KNVCLG-ILNGSEAEVGENNIIGEIFMQDKMV 228 (254)
Q Consensus 151 ~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~-~~~C~~-~~~~~~~~~~~~~iLG~~f~~~~~v 228 (254)
..|+. .+|+|+|+|+| .+++||+++|++.... ...|++ +...+. .+.||||++|||++|+
T Consensus 247 ~~C~~-----------~~P~i~f~fgg----~~~~l~~~~~~~~~~~~~~~C~~~i~~~~~---~~~~ILG~~fl~~~y~ 308 (323)
T 1bxo_A 247 FDCST-----------NLPDFSVSISG----YTATVPGSLINYGPSGDGSTCLGGIQSNSG---IGFSIFGDIFLKSQYV 308 (323)
T ss_dssp ECTTC-----------CCCCEEEEETT----EEEEECHHHHEEEECSSSSCEEESEEECTT---CSSEEECHHHHTTEEE
T ss_pred EECCC-----------CCceEEEEECC----EEEEECHHHeEEeccCCCCeEEEEEECCCC---CCcEEEChHHHcCEEE
Confidence 34653 57999999976 9999999999987643 378986 665432 4589999999999999
Q ss_pred EEeCCCCEEeeecC
Q 025328 229 IYDNEKQRIGWKPE 242 (254)
Q Consensus 229 vfD~~~~rIGfa~~ 242 (254)
|||++++|||||++
T Consensus 309 vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 309 VFDSDGPQLGFAPQ 322 (323)
T ss_dssp EEETTTTEEEEEEB
T ss_pred EEECCCCEEEEecC
Confidence 99999999999986
No 29
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=6.4e-39 Score=281.01 Aligned_cols=213 Identities=14% Similarity=0.216 Sum_probs=167.7
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCCC---------hHHHHHHhCCccCeEEEEecCCCcEEEEECCCC--CCC
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRIS---------IVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGK--VPS 70 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~s---------~~~ql~~~~~i~~~Fs~~l~~~~~G~l~fGg~~--~~~ 70 (254)
+++|||++++++.+. .....+||||||++.++ +..+|.++ +-+++||+||.++..|.|+|||+| ++.
T Consensus 103 ~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~ 180 (329)
T 3c9x_A 103 TQGVESATRVSTEFV-QDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS-LAEPLFTADLRHGQNGSYNFGYIDTSVAK 180 (329)
T ss_dssp EEEEEEEEEECHHHH-HCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT-SSSSEEEEECCSSSCEEEEESSCCGGGCS
T ss_pred ceEEEEEEecCcccc-ccCCCceeEEeCcccccccCCCCCCCHHHHHHHh-cCCCEEEEEecCCCCcEEEEeCcChhhcc
Confidence 578999998765431 12468999999987543 66788775 338999999998779999999998 468
Q ss_pred CCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCCCC
Q 025328 71 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTL 150 (254)
Q Consensus 71 ~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 150 (254)
+++.|+|+... ..+|.|.+++|+|+++.+......+||||||++++||++++++|.+++..... ... ...+.
T Consensus 181 g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~----~~~-~~~~~ 252 (329)
T 3c9x_A 181 GPVAYTPVDNS---QGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDNVVDAYYANVQSAQY----DNQ-QEGVV 252 (329)
T ss_dssp SCEEEEECBCT---TSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHHHHHHHHTTCTTCEE----ETT-TTEEE
T ss_pred cceEEEEccCC---CceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHHHHHHHHHhCCCcEE----cCC-CCEEE
Confidence 99999999854 37999999999999987765567999999999999999999998876632211 000 01112
Q ss_pred CcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCC--CceEEE-EEcCCcCCCCCceeeccceeeceE
Q 025328 151 PICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCLG-ILNGSEAEVGENNIIGEIFMQDKM 227 (254)
Q Consensus 151 ~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~iLG~~f~~~~~ 227 (254)
..|+. .+|+|+|+|+| ++++||+++|++.... ...|++ +..... .+.||||+.|||++|
T Consensus 253 ~~C~~-----------~~P~i~f~f~g----~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~---~~~~ILG~~fl~~~y 314 (329)
T 3c9x_A 253 FDCDE-----------DLPSFSFGVGS----STITIPGDLLNLTPLEEGSSTCFGGLQSSSG---IGINIFGDVALKAAL 314 (329)
T ss_dssp EETTC-----------CCCCEEEEETT----EEEEECGGGGEEEESSTTCSEEEESEEECTT---TTSEEECHHHHTTEE
T ss_pred EECCC-----------CCCcEEEEECC----EEEEECHHHeeeeccCCCCCeEEEEEEcCCC---CCcEEEChHHhccEE
Confidence 35753 57999999997 9999999999987532 368986 665432 468999999999999
Q ss_pred EEEeCCCCEEeeecC
Q 025328 228 VIYDNEKQRIGWKPE 242 (254)
Q Consensus 228 vvfD~~~~rIGfa~~ 242 (254)
+|||++++|||||+.
T Consensus 315 ~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 315 VVFDLGNERLGWAQK 329 (329)
T ss_dssp EEEETTTTEEEEEEC
T ss_pred EEEECCCCEEeEecC
Confidence 999999999999974
No 30
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=6.7e-39 Score=280.89 Aligned_cols=213 Identities=13% Similarity=0.193 Sum_probs=166.4
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCCC---------hHHHHHHhCCccCeEEEEecCCCcEEEEECCCCC--CC
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRIS---------IVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKV--PS 70 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~s---------~~~ql~~~~~i~~~Fs~~l~~~~~G~l~fGg~~~--~~ 70 (254)
+++|||++++.+.+. .....+||||||++.++ +..+|.++ +-+++||+||.++..|.|+|||+|+ +.
T Consensus 102 ~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~ 179 (329)
T 1oew_A 102 GQAVESAKKVSSSFT-EDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS-LDSPVFTADLGYHAPGTYNFGFIDTTAYT 179 (329)
T ss_dssp EEEEEEEEEECHHHH-HCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT-SSSSEEEEECCSSSCEEEEESCCCTTSSS
T ss_pred eeEEEEEEecCcccc-ccCCCceEEEeccccccccCcCCCCCHHHHHHHh-ccCcEEEEEccCCCCeEEEEeccChHhcc
Confidence 578999998765432 12468999999987543 66788776 3389999999977799999999984 57
Q ss_pred CCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCCCC
Q 025328 71 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTL 150 (254)
Q Consensus 71 ~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 150 (254)
+++.|+|+... ..+|.|.+++|+|+++.+......+||||||++++||++++++|.+++..... ... ...+.
T Consensus 180 g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~----~~~-~g~~~ 251 (329)
T 1oew_A 180 GSITYTAVSTK---QGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATVVSAYWAQVSGAKS----SSS-VGGYV 251 (329)
T ss_dssp SCCEEEECBCT---TSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHHHHHHHHTTSTTCEE----ETT-TTEEE
T ss_pred cceEEEEccCC---CceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHHHHHHHHHhCCCcEE----cCC-CCEEE
Confidence 99999999854 37999999999999986654457999999999999999999999877632211 000 11112
Q ss_pred CcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeC-C-CceEEE-EEcCCcCCCCCceeeccceeeceE
Q 025328 151 PICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISG-R-KNVCLG-ILNGSEAEVGENNIIGEIFMQDKM 227 (254)
Q Consensus 151 ~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~-~-~~~C~~-~~~~~~~~~~~~~iLG~~f~~~~~ 227 (254)
..|+. .+|+|+|+|+| ++++||+++|++... . ...|++ +..... .+.||||+.|||++|
T Consensus 252 ~~C~~-----------~~P~i~f~fgg----~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~---~~~~iLG~~fl~~~y 313 (329)
T 1oew_A 252 FPCSA-----------TLPSFTFGVGS----ARIVIPGDYIDFGPISTGSSSCFGGIQSSAG---IGINIFGDVALKAAF 313 (329)
T ss_dssp EETTC-----------CCCCEEEEETT----EEEEECHHHHEEEESSTTCSEEEESEEESTT---TSSEEECHHHHTTEE
T ss_pred EECCC-----------CCCcEEEEECC----EEEEECHHHeeeeecCCCCCeEEEEEEeCCC---CCceEEChHHhcCEE
Confidence 35753 57999999966 999999999998753 2 368986 555432 468999999999999
Q ss_pred EEEeC-CCCEEeeecC
Q 025328 228 VIYDN-EKQRIGWKPE 242 (254)
Q Consensus 228 vvfD~-~~~rIGfa~~ 242 (254)
+|||+ +++|||||++
T Consensus 314 ~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 314 VVFNGATTPTLGFASK 329 (329)
T ss_dssp EEEECSSSCEEEEEEC
T ss_pred EEEECCCCceEEEecC
Confidence 99999 9999999974
No 31
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.8e-38 Score=282.83 Aligned_cols=208 Identities=16% Similarity=0.241 Sum_probs=170.1
Q ss_pred EEeeccC----CCCCCCCCCCCcceEeecCCCCC------ChHHHHHHhCCc-cCeEEEEecCC--CcEEEEECCCCC--
Q 025328 4 FCSCGYN----QHNPGPLSPPDTAGVLGLGRGRI------SIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLGDGKV-- 68 (254)
Q Consensus 4 ~fGc~~~----~~~~~~~~~~~~dGIlGLg~~~~------s~~~ql~~~~~i-~~~Fs~~l~~~--~~G~l~fGg~~~-- 68 (254)
+|||+++ +. .| .....+||||||++.+ +++.+|.++++| +++||+||.+. ..|.|+|||+|.
T Consensus 149 ~Fg~~~~~~~~~~-~f--~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~ 225 (375)
T 1miq_A 149 KFIEVTDTDDLEP-IY--SSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKF 225 (375)
T ss_dssp EEEEEEECGGGTT-HH--HHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGG
T ss_pred EEEEEEecccccc-cc--ccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHH
Confidence 8999998 54 33 2356899999999865 478899999999 79999999964 489999999984
Q ss_pred CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCCC
Q 025328 69 PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDK 148 (254)
Q Consensus 69 ~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~ 148 (254)
+.+++.|+|+... .+|.|.++ |+|+++.+ ....+||||||++++||++++++|.+++.+... .. ...
T Consensus 226 ~~g~l~~~p~~~~----~~w~v~l~-i~v~g~~~--~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~-~g~ 292 (375)
T 1miq_A 226 YEGNITYEKLNHD----LYWQIDLD-VHFGKQTM--EKANVIVDSGTTTITAPSEFLNKFFANLNVIKV-----PF-LPF 292 (375)
T ss_dssp EEEEEEEEEBSSS----SSSEEEEE-EEETTEEE--EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEC-----TT-SSC
T ss_pred cCCceEEEecCCC----ceEEEEEE-EEECCEEc--ccceEEecCCCccEEcCHHHHHHHHHHhCCccc-----CC-CCe
Confidence 5789999999753 79999999 99999888 467999999999999999999999998855322 11 112
Q ss_pred CCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCC--CceEE-EEEcCCcCCCCCceeeccceeec
Q 025328 149 TLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCL-GILNGSEAEVGENNIIGEIFMQD 225 (254)
Q Consensus 149 ~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~~iLG~~f~~~ 225 (254)
+...|+. ..+|+|+|+|+| +.++|||++|++.... ...|+ +|...+.. .+.||||++|||+
T Consensus 293 ~~~~C~~----------~~~P~i~f~f~g----~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~--~~~~ILG~~fl~~ 356 (375)
T 1miq_A 293 YVTTCDN----------KEMPTLEFKSAN----NTYTLEPEYYMNPILEVDDTLCMITMLPVDID--SNTFILGDPFMRK 356 (375)
T ss_dssp EEEETTC----------TTCCCEEEECSS----CEEEECGGGSEEESSSSSCSEEEESEEECCSS--SSEEEECHHHHHH
T ss_pred EEEECCC----------CCCCcEEEEECC----EEEEECHHHhEeeccCCCCCeEEEEEEECCCC--CCcEEECHHHhcc
Confidence 2345764 257999999987 9999999999998752 35898 78765421 2689999999999
Q ss_pred eEEEEeCCCCEEeeecCC
Q 025328 226 KMVIYDNEKQRIGWKPED 243 (254)
Q Consensus 226 ~~vvfD~~~~rIGfa~~~ 243 (254)
+|+|||++++|||||+++
T Consensus 357 ~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 357 YFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred EEEEEECCCCEEEEEEcC
Confidence 999999999999999864
No 32
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2e-37 Score=283.63 Aligned_cols=231 Identities=21% Similarity=0.316 Sum_probs=172.1
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCCC------hHHHHHHhCCc-cCeEEEEecCC----CcEEEEECCCCC--
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRIS------IVSQLREYGLI-RNVIGHCIGQN----GRGVLFLGDGKV-- 68 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~s------~~~ql~~~~~i-~~~Fs~~l~~~----~~G~l~fGg~~~-- 68 (254)
+++|||++++.+.. +.....|||||||++.++ +..+|.++++| +++||+||.+. .+|+|+|||+|.
T Consensus 139 ~~~Fg~a~~~~~~~-f~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~ 217 (478)
T 1qdm_A 139 DQEFIEATKEPGIT-FLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKH 217 (478)
T ss_dssp EEEEEEEEECCBSH-HHHCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTS
T ss_pred CEEEEEEEecCCcc-cccccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhh
Confidence 57899999875532 123467999999998765 45789999998 79999999863 489999999985
Q ss_pred CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecC--CCCeEEEecCCccEEeChHHHHHHHHHHHHHh----------
Q 025328 69 PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL--KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDL---------- 136 (254)
Q Consensus 69 ~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~--~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~---------- 136 (254)
+.+++.|+|+... .+|.|.+++|+|+++.+.+ ....+||||||+++++|+++|++|.+++.+..
T Consensus 218 ~~G~l~~~pv~~~----~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v 293 (478)
T 1qdm_A 218 YVGEHTYVPVTQK----GYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIV 293 (478)
T ss_dssp EEEEEEEEEEEEE----TTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHH
T ss_pred cCCCceEEeccCC----CeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchh
Confidence 4689999999763 6999999999999998765 35689999999999999999999998885421
Q ss_pred ------------cC------------CC----------Cc-cCCCC-----C----------------------------
Q 025328 137 ------------IG------------TP----------LK-LAPDD-----K---------------------------- 148 (254)
Q Consensus 137 ------------~~------------~~----------~~-~~~~~-----~---------------------------- 148 (254)
.. +. ++ .+... .
T Consensus 294 ~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~ 373 (478)
T 1qdm_A 294 SQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQD 373 (478)
T ss_dssp HHTHHHHHHHHHTTCCHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred hhhhhHHHHhhhhccChhhhhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHH
Confidence 00 00 00 00000 0
Q ss_pred -----CCCcccCCCCC------CcccccccCCcEEEEEccCCcceEEEecCCceEEEeCC--CceEEE-EEcCCcC-CCC
Q 025328 149 -----TLPICWRGPFK------ALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCLG-ILNGSEA-EVG 213 (254)
Q Consensus 149 -----~~~~C~~~~~~------~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~~-~~~ 213 (254)
-...|+..+.. .|..+ ..+|+|+|+|+| +.++|+|++|++.... ...|++ |...+.. +..
T Consensus 374 ~I~~~~~~~C~~~~~~~g~~~v~C~~~-~~lP~i~f~~gg----~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~ 448 (478)
T 1qdm_A 374 LILDYVNQLCNRLPSPMGESAVDCGSL-GSMPDIEFTIGG----KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRG 448 (478)
T ss_dssp HHHHHHHHHTTCBCCSSSCCEECGGGG-TTCCCEEEEETT----EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSC
T ss_pred HHHHHHHHHhhccCCCCCeEEeecccc-cccccEEEEECC----EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCC
Confidence 01235443211 12222 478999999987 9999999999998754 358985 6644321 124
Q ss_pred CceeeccceeeceEEEEeCCCCEEeeecC
Q 025328 214 ENNIIGEIFMQDKMVIYDNEKQRIGWKPE 242 (254)
Q Consensus 214 ~~~iLG~~f~~~~~vvfD~~~~rIGfa~~ 242 (254)
+.||||++|||++|+|||++|+|||||++
T Consensus 449 ~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 449 PLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp SEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred CcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 68999999999999999999999999986
No 33
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.2e-37 Score=280.97 Aligned_cols=210 Identities=15% Similarity=0.221 Sum_probs=168.5
Q ss_pred eEEeeccCCC--CCCCCCCCCcceEeecCCCCC------ChHHHHHHhCCc-cCeEEEEecCC--CcEEEEECCCCC--C
Q 025328 3 SFCSCGYNQH--NPGPLSPPDTAGVLGLGRGRI------SIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLGDGKV--P 69 (254)
Q Consensus 3 ~~fGc~~~~~--~~~~~~~~~~dGIlGLg~~~~------s~~~ql~~~~~i-~~~Fs~~l~~~--~~G~l~fGg~~~--~ 69 (254)
++|||++++. +... .....+||||||++.+ +++.+|.+++++ +++||+||.+. .+|.|+|||+|. +
T Consensus 224 ~~Fg~a~~~~~~g~~f-~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y 302 (453)
T 2bju_A 224 YKFIEVIDTNGFEPTY-TASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFY 302 (453)
T ss_dssp EEEEEEEECGGGTTHH-HHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGE
T ss_pred EEEEEEEEecccCccc-cccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHc
Confidence 6899999886 4321 2346899999998754 467899999999 79999999964 689999999984 5
Q ss_pred CCCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCC-C
Q 025328 70 SSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDD-K 148 (254)
Q Consensus 70 ~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~-~ 148 (254)
.+++.|+|+... .+|.|.++ |+|+++.+ ....+||||||++++||++++++|.+++.+.. .. .. .
T Consensus 303 ~G~l~~~pv~~~----~~w~V~l~-I~Vgg~~~--~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~------~~-~g~~ 368 (453)
T 2bju_A 303 EGPLTYEKLNHD----LYWQITLD-AHVGNIML--EKANCIVDSGTSAITVPTDFLNKMLQNLDVIK------VP-FLPF 368 (453)
T ss_dssp EEEEEEEEEEEE----TTEEEEEE-EEETTEEE--EEEEEEECTTCCSEEECHHHHHHHTTTSSCEE------CT-TSSC
T ss_pred CCceEEEecCCC----ceEEEEEE-EEECcEEe--ccccEEEcCCCCeEecCHHHHHHHHHHhCCcc------cC-CCce
Confidence 789999999763 69999999 99999443 46789999999999999999999987764321 11 11 1
Q ss_pred CCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCC--CceEE-EEEcCCcCCCCCceeeccceeec
Q 025328 149 TLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCL-GILNGSEAEVGENNIIGEIFMQD 225 (254)
Q Consensus 149 ~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~~iLG~~f~~~ 225 (254)
+...|+. ..+|+|+|+|+| +.++|||++|++.... +..|+ ++...+.. .+.||||++|||+
T Consensus 369 ~~v~C~~----------~~~P~itf~fgg----~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~--~~~~ILGd~Flr~ 432 (453)
T 2bju_A 369 YVTLCNN----------SKLPTFEFTSEN----GKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFP--VPTFILGDPFMRK 432 (453)
T ss_dssp EEEETTC----------TTCCCEEEECSS----CEEEECHHHHEEECTTTSTTEEEECEEECCCS--SCEEEECHHHHHH
T ss_pred EEEecCC----------CCCCcEEEEECC----EEEEECHHHhEeecccCCCceEEEEEEeCCCC--CCCEEECHHHhhc
Confidence 2335754 257999999987 9999999999998753 46898 67765421 3489999999999
Q ss_pred eEEEEeCCCCEEeeecCC
Q 025328 226 KMVIYDNEKQRIGWKPED 243 (254)
Q Consensus 226 ~~vvfD~~~~rIGfa~~~ 243 (254)
+|+|||++++|||||+++
T Consensus 433 ~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 433 YFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred EEEEEECCCCEEEEEEcc
Confidence 999999999999999975
No 34
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=7.6e-37 Score=277.62 Aligned_cols=209 Identities=16% Similarity=0.238 Sum_probs=168.0
Q ss_pred eEEeeccC----CCCCCCCCCCCcceEeecCCCCC------ChHHHHHHhCCc-cCeEEEEecCC--CcEEEEECCCCC-
Q 025328 3 SFCSCGYN----QHNPGPLSPPDTAGVLGLGRGRI------SIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLGDGKV- 68 (254)
Q Consensus 3 ~~fGc~~~----~~~~~~~~~~~~dGIlGLg~~~~------s~~~ql~~~~~i-~~~Fs~~l~~~--~~G~l~fGg~~~- 68 (254)
++|||+++ +.+ + .....+||||||++.+ +++.+|.++|+| +++||+||.+. ..|.|+|||+|+
T Consensus 223 ~~Fg~a~~t~~~~~~-f--~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s 299 (451)
T 3qvc_A 223 YKFIEMTEIVGFEPF-Y--SESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEER 299 (451)
T ss_dssp EEEEEEEEEEECTTH-H--HHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGG
T ss_pred EEEEEEEeccccCCC-c--cCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchh
Confidence 68999998 655 3 2346899999998764 588999999999 79999999963 489999999984
Q ss_pred -CCCCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHHHHHHHHHhcCCCCccCCCC
Q 025328 69 -PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDD 147 (254)
Q Consensus 69 -~~~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~ 147 (254)
+.+++.|+|+... .+|.|.++ |+|+++ ......+||||||++++||++++++|.+++.+.... . ..
T Consensus 300 ~y~G~l~~~pv~~~----~~w~v~l~-I~Vgg~--~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~-----~-~g 366 (451)
T 3qvc_A 300 FFDGPLNYEKLNHD----LMWQVDLD-VHFGNV--SSKKANVILDSATSVITVPTEFFNQFVESASVFKVP-----F-LS 366 (451)
T ss_dssp GEEEEEEEEECSST----TSSEEEEE-EEETTE--EEEEEEEEECTTBSSEEECHHHHHHHHTTTTCEECT-----T-SS
T ss_pred hcCCceEEEEcccC----CeeEEEEE-EEECCc--cCCCceEEEeCCCccccCCHHHHHHHHHHcCCeecC-----C-CC
Confidence 5789999999853 79999999 999998 223579999999999999999999998877433210 0 11
Q ss_pred CCCCcccCCCCCCcccccccCCcEEEEEccCCcceEEEecCCceEEEeCC--CceEE-EEEcCCcCCCCCceeeccceee
Q 025328 148 KTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCL-GILNGSEAEVGENNIIGEIFMQ 224 (254)
Q Consensus 148 ~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~~iLG~~f~~ 224 (254)
.+...|. . ..+|+|+|+|+| ..++|||++|++.... +..|+ ++...+.. .+.||||++|||
T Consensus 367 ~y~v~C~-~---------~~~P~itf~fgg----~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~--~~~~ILG~~FLr 430 (451)
T 3qvc_A 367 LYVTTCG-N---------TKLPTLEYRSPN----KVYTLEPKQYLEPLENIFSALCMLNIVPIDLE--KNTFVLGDPFMR 430 (451)
T ss_dssp CEEEETT-C---------TTCCCEEEEETT----EEEEECHHHHEEECTTTSTTEEEECEEECCCS--TTEEEECHHHHH
T ss_pred eEEeeCC-c---------CcCCcEEEEECC----EEEEEcHHHheeecccCCCCeEEEEEEeCCCC--CCCEEECHHHhh
Confidence 1223465 1 368999999998 9999999999998642 46897 56655421 357999999999
Q ss_pred ceEEEEeCCCCEEeeecCC
Q 025328 225 DKMVIYDNEKQRIGWKPED 243 (254)
Q Consensus 225 ~~~vvfD~~~~rIGfa~~~ 243 (254)
++|+|||++++|||||+++
T Consensus 431 ~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 431 KYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp HEEEEEETTTTEEEEEEEC
T ss_pred cEEEEEECCCCEEEEEEcc
Confidence 9999999999999999864
No 35
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.88 E-value=3.2e-23 Score=173.49 Aligned_cols=127 Identities=18% Similarity=0.190 Sum_probs=106.2
Q ss_pred ceEEeeccCCCCCCCCCCCCcceEeecCCCCCC--hHHHHHHhCCc-cCeEEEEecC----CCcEEEEECCCCC--CCCC
Q 025328 2 LSFCSCGYNQHNPGPLSPPDTAGVLGLGRGRIS--IVSQLREYGLI-RNVIGHCIGQ----NGRGVLFLGDGKV--PSSG 72 (254)
Q Consensus 2 ~~~fGc~~~~~~~~~~~~~~~dGIlGLg~~~~s--~~~ql~~~~~i-~~~Fs~~l~~----~~~G~l~fGg~~~--~~~~ 72 (254)
+++|||++++.+.. +.....+||||||++.++ +..+|.+++++ +++||+||.+ ...|+|+|||+|+ +.++
T Consensus 100 ~~~fg~~~~~~~~~-f~~~~~~GilGLg~~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~ 178 (239)
T 1b5f_A 100 EQDFIEATDEADNV-FLHRLFDGILGLSFQTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGD 178 (239)
T ss_dssp EEEEEEEEEECHHH-HTTCSCCEEEECSCCSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEE
T ss_pred cEEEEEEEeccCcc-ccccCcceEEecCccccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCc
Confidence 57899999875421 123568999999999876 55678899988 7999999985 2589999999984 4689
Q ss_pred ceEEecccCCCCCCCeEEeeeEEEECCEEecCC--CCeEEEecCCccEEeChHHHHHHHHHHH
Q 025328 73 VAWTPMLQNSADLKHYILGPAELLYSGKSCGLK--DLTLIFDSGASYAYFTSRVYQEIVSLIM 133 (254)
Q Consensus 73 i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~--~~~~iiDSGTt~~~lp~~~~~~l~~~~~ 133 (254)
+.|+|+... .+|.|.+++|+|+++.+.+. ...+||||||++++||++++++|.+++.
T Consensus 179 l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 179 HTYVPVTYQ----YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp EEEEEEEEE----TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred eEEEEcccC----CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 999999863 69999999999999987643 4689999999999999999999998774
No 36
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.73 E-value=6e-18 Score=119.39 Aligned_cols=74 Identities=18% Similarity=0.447 Sum_probs=61.0
Q ss_pred ccCCcEEEEEccCCcceEEEecCCceEEEeCC--CceEE-EEEcCCcCCCCCceeeccceeeceEEEEeCCCCEEeeecC
Q 025328 166 EYFKPLALSFTNRRNSVRLVVPPEAYLVISGR--KNVCL-GILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPE 242 (254)
Q Consensus 166 ~~~P~i~f~f~g~~~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~~iLG~~f~~~~~vvfD~~~~rIGfa~~ 242 (254)
..+|+|+|+|+| ..++|+|++|++.... ...|+ +++..+..+..+.||||++|||++|+|||++++|||||++
T Consensus 11 ~~~P~i~f~~gg----~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~~ 86 (87)
T 1b5f_B 11 SSMPNVSFTIGG----KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEA 86 (87)
T ss_dssp GGCCCEEEEETT----EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred CcCCcEEEEECC----EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEEc
Confidence 368999999987 9999999999998643 36898 5775432112458999999999999999999999999986
Q ss_pred C
Q 025328 243 D 243 (254)
Q Consensus 243 ~ 243 (254)
+
T Consensus 87 ~ 87 (87)
T 1b5f_B 87 A 87 (87)
T ss_dssp C
T ss_pred C
Confidence 3
No 37
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=92.06 E-value=0.18 Score=38.03 Aligned_cols=28 Identities=11% Similarity=0.118 Sum_probs=25.6
Q ss_pred ceeeccceeeceEEEEeCCCCEEeeecC
Q 025328 215 NNIIGEIFMQDKMVIYDNEKQRIGWKPE 242 (254)
Q Consensus 215 ~~iLG~~f~~~~~vvfD~~~~rIGfa~~ 242 (254)
..|||..||+.+-.+.|++++++-|...
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 4799999999999999999999999764
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=78.84 E-value=2.3 Score=31.51 Aligned_cols=27 Identities=11% Similarity=0.195 Sum_probs=24.9
Q ss_pred ceeeccceeeceEEEEeCCCCEEeeec
Q 025328 215 NNIIGEIFMQDKMVIYDNEKQRIGWKP 241 (254)
Q Consensus 215 ~~iLG~~f~~~~~vvfD~~~~rIGfa~ 241 (254)
..|||..||+.+-+..|++++++-|..
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEETT
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEcc
Confidence 479999999999999999999999874
No 39
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=49.67 E-value=8.6 Score=26.30 Aligned_cols=40 Identities=18% Similarity=0.183 Sum_probs=25.6
Q ss_pred EecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 76 TPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 76 ~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
.|+.... ...|.++ |.||.- .....+++|||++.+.+|..
T Consensus 5 ~~l~n~~--~~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 5 EVLKNYM--DAQYYGE---IGIGTP---PQCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEET--TTEEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred EeeEECC--CCeEEEE---EEECCC---CeEEEEEEeCCCCceEEeEc
Confidence 4554322 2456653 568741 11347899999999999975
No 40
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=42.18 E-value=32 Score=29.07 Aligned_cols=45 Identities=20% Similarity=0.356 Sum_probs=30.4
Q ss_pred CCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 71 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 71 ~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
+.+...|+.... ...|.++ |.||.- .....+++|||++.+.+|..
T Consensus 5 g~~~~~~l~~~~--~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 5 GSVDTPGLYDFD--LEEYAIP---VSIGTP---GQDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp CCEEEEEEEETT--TTEEEEE---EEETTT---TEEEEEEEETTCCCCEEEBT
T ss_pred CccceEEeecCC--CCEEEEE---EEECCC---CcEEEEEEcCCCCCeEECCC
Confidence 566667887632 2566654 558841 11237899999999999975
No 41
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=40.25 E-value=23 Score=30.35 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=23.8
Q ss_pred EecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeCh
Q 025328 76 TPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 122 (254)
Q Consensus 76 ~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~ 122 (254)
+|+.+... ...|.+++ .||.. +++|||++.+.+|.
T Consensus 5 ~pv~~~~~-~~~Y~~~i---~iGtP--------v~~DTGSs~lWv~c 39 (381)
T 1t6e_X 5 APVTKDPA-TSLYTIPF---HDGAS--------LVLDVAGPLVWSTC 39 (381)
T ss_dssp EEEEECTT-TCCEEEEE---ETTEE--------EEEETTCCCEEECC
T ss_pred EeEEecCC-CcEEEEEE---eCCCE--------EEEECCCCceEEeC
Confidence 46654322 35666554 46642 99999999999995
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=38.33 E-value=31 Score=23.80 Aligned_cols=31 Identities=13% Similarity=0.163 Sum_probs=24.5
Q ss_pred CeEEeeeEEEECCEEecCCCCeEEEecCCccEEeCh
Q 025328 87 HYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 122 (254)
Q Consensus 87 ~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~ 122 (254)
.|+-.+..+.++++.+ .+++|||.-.+.+.+
T Consensus 5 l~~rP~vtvkI~Gq~~-----eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 5 LWKRPLVTIKIGGQLK-----EALLDTGADDTIIEE 35 (99)
T ss_dssp SSSCCEEEEEETTEEE-----EEEECTTCSSEEESC
T ss_pred ccCCCEEEEEECCEEE-----EEEeccCCCcEEEec
Confidence 3555667788999865 689999999998875
No 43
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=38.07 E-value=23 Score=29.53 Aligned_cols=43 Identities=26% Similarity=0.342 Sum_probs=28.8
Q ss_pred CCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHH
Q 025328 71 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVY 125 (254)
Q Consensus 71 ~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~ 125 (254)
+.+.-.|+.. ...|.++ |+||.+. ..+++|||++.+.+|..-.
T Consensus 4 g~v~~~~~~~----~~~Y~~~---i~iG~Q~-----~~v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 4 GVATNTPTAN----DEEYITP---VTIGGTT-----LNLNFDTGSADLWVFSTEL 46 (323)
T ss_dssp EEEEEEECGG----GSCEEEE---EEETTEE-----EEEEEETTCCCEEECBTTS
T ss_pred CceeeeecCC----CCEEEEE---EEECCEE-----EEEEEeCCCcceEEecCCC
Confidence 3445556543 2567654 5588443 4789999999999998643
No 44
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=35.60 E-value=31 Score=23.96 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=26.9
Q ss_pred CeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHH
Q 025328 87 HYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVY 125 (254)
Q Consensus 87 ~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~ 125 (254)
.|+-.+-.+.++|+.+ .+++|||.-.+.+.....
T Consensus 5 l~~RP~v~v~I~Gq~~-----e~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 5 LEKRPTTIVLINDTPL-----NVLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSSCCEEEEEETTEEE-----EEEECTTCSSCEEEHHHH
T ss_pred ccCCCEEEEEECCEEE-----EEEeccCCCcEEEccccC
Confidence 4555666788999854 789999999999997654
No 45
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=35.37 E-value=27 Score=29.14 Aligned_cols=42 Identities=24% Similarity=0.289 Sum_probs=28.3
Q ss_pred CceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHH
Q 025328 72 GVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVY 125 (254)
Q Consensus 72 ~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~ 125 (254)
.+.-.|+.. ...|.++ |.||.+ ...+++|||++.+.+|..-.
T Consensus 5 ~v~~~~~~~----~~~Y~~~---i~iG~q-----~~~v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 5 SVTTNPTSN----DEEYITQ---VTVGDD-----TLGLDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEEEECGG----GCCEEEE---EEETTE-----EEEEEEETTCCCEEECBTTS
T ss_pred ceeeeEcCC----CCEEEEE---EEECCE-----EEEEEEcCCCcceEEecCCC
Confidence 344456543 2456654 558843 34789999999999998643
No 46
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=35.23 E-value=24 Score=29.41 Aligned_cols=43 Identities=23% Similarity=0.360 Sum_probs=27.5
Q ss_pred ceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 73 VAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 73 i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
+.-.|+.... +..|.+ .|.||.- .....+++|||++.+.+|..
T Consensus 3 ~~~~~l~n~~--~~~Y~~---~i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 3 VASVPLTNYL--DSQYFG---KIYLGTP---PQEFTVLFDTGSSDFWVPSI 45 (323)
T ss_dssp CEEEEEEEET--TTEEEE---EEEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred cceeeeEecc--CCEEEE---EEEECCC---CeEEEEEEeCCccceEEcCC
Confidence 3445665422 245665 4558851 11347899999999999975
No 47
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=34.11 E-value=28 Score=29.04 Aligned_cols=42 Identities=21% Similarity=0.267 Sum_probs=27.8
Q ss_pred CceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHH
Q 025328 72 GVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVY 125 (254)
Q Consensus 72 ~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~ 125 (254)
.+.-+|+.. ...|.++ |.||.+. ..+++|||++.+.+|..-.
T Consensus 4 ~v~~~~~~~----~~~Y~~~---i~iG~Q~-----~~v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 4 SAVTTPQNN----DEEYLTP---VTVGKST-----LHLDFDTGSADLWVFSDEL 45 (325)
T ss_dssp EEEEEECTT----TSCEEEE---EEEBTEE-----EEEEEETTCCCEEEECTTS
T ss_pred eEEeEEcCC----CCEEEEE---EEECCEE-----EEEEEeCCCccceEeeCCC
Confidence 344455542 3567654 5577443 4789999999999998643
No 48
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=33.66 E-value=52 Score=27.40 Aligned_cols=39 Identities=15% Similarity=0.338 Sum_probs=25.4
Q ss_pred EecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 76 TPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 76 ~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
.|+... ...|.++ |.||.- .....+++|||++.+.+|..
T Consensus 5 ~~l~~~---~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 5 TTLINE---GPSYAAD---IVVGSN---QQKQTVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEEC---SSSEEEE---EEETTT---TEEEEEEEETTCCCEEEEEE
T ss_pred EEEecC---CcEEEEE---EEEcCC---CcEEEEEEcCCCCCEEEecC
Confidence 355543 2567654 558741 11347899999999999854
No 49
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=32.22 E-value=37 Score=23.39 Aligned_cols=30 Identities=13% Similarity=0.244 Sum_probs=23.9
Q ss_pred CeEEeeeEEEECCEEecCCCCeEEEecCCccEEeC
Q 025328 87 HYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFT 121 (254)
Q Consensus 87 ~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp 121 (254)
.|+-.+..+.++|+.+ .+++|||..-+.+.
T Consensus 5 l~~RP~vti~I~Gq~~-----e~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPV-----EVLLDTGADDSIVA 34 (99)
T ss_dssp SSSCCEEEEEETTEEE-----EEEECTTCSSCEES
T ss_pred cccCCeEEEEECCEEE-----EEEEecCCCceEEc
Confidence 4666777799999866 67999999888873
No 50
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=31.70 E-value=58 Score=27.18 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=22.2
Q ss_pred CCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 86 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 86 ~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
..|.++ |.||.- .....+++|||++.+.+|..
T Consensus 12 ~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 12 ITYTAD---ITVGSD---NQKLNVIVDTGSSDLWIPDS 43 (342)
T ss_dssp SCEEEE---EEETTT---TEEEEEEEETTCCCEEEEEE
T ss_pred eEEEEE---EEECCC---CcEEEEEEeCCCCCeEEecC
Confidence 567654 558741 11247899999999999854
No 51
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=30.96 E-value=30 Score=28.92 Aligned_cols=39 Identities=15% Similarity=0.287 Sum_probs=25.9
Q ss_pred EecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 76 TPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 76 ~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
.|+.... ..|.++ |.||.- .....+++|||++.+.+|..
T Consensus 5 ~~l~~~~---~~Y~~~---i~iGtP---~Q~~~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 5 LSLINEG---PSYASK---VSVGSN---KQQQTVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEECS---SSEEEE---EEETTT---TEEEEEEEETTCCCEEEEEE
T ss_pred eEEEcCC---CEEEEE---EEEcCC---CcEEEEEEeCCCCceEEecC
Confidence 4665542 567655 448741 11347899999999999854
No 52
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=30.74 E-value=32 Score=29.67 Aligned_cols=41 Identities=10% Similarity=0.134 Sum_probs=26.8
Q ss_pred EecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 76 TPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 76 ~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
.|+..+. ....|.+ .|.||.- .....++||||++.+.+|..
T Consensus 12 ~pl~~~~-~~~~Y~~---~i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 12 LPVQNDG-STGLHWA---NLQKRTP---LMQVPVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEECT-TTCCEEE---EEEETTT---TEEEEEEEETTCSSEEEECS
T ss_pred EeeecCC-CCceEEE---EEECCCC---CceeEEEEECCCCceeECCC
Confidence 6776432 1356665 4558741 12347999999999999864
No 53
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=30.73 E-value=11 Score=27.64 Aligned_cols=35 Identities=11% Similarity=0.229 Sum_probs=26.6
Q ss_pred CCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHHHHH
Q 025328 86 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEI 128 (254)
Q Consensus 86 ~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l 128 (254)
.++.+. +.+||+.+ .+++|||.+.+.++++..+.+
T Consensus 25 ~~~~v~---v~InG~~~-----~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 25 PMLYIN---IEINNYPV-----KAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp CCCEEE---EEETTEEE-----EEEECTTCSSCEEEHHHHHHH
T ss_pred ceEEEE---EEECCEEE-----EEEEECCCCccccCHHHHHHc
Confidence 344544 56888843 789999999999998877654
No 54
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=30.72 E-value=41 Score=23.90 Aligned_cols=31 Identities=13% Similarity=0.206 Sum_probs=25.4
Q ss_pred CCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeCh
Q 025328 86 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 122 (254)
Q Consensus 86 ~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~ 122 (254)
..|+-.+. +.++|+.+ .+++|||.-.+.+.+
T Consensus 10 ~l~~rP~v-ikI~Gq~~-----eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPI-----KFLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEE-----EEEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEE-----EEEecCCCCcEEEcc
Confidence 35777777 99999865 689999999998875
No 55
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=29.86 E-value=51 Score=23.97 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=22.6
Q ss_pred EEeeeEEEECCEEecCCCCeEEEecCCccEEeCh
Q 025328 89 ILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 122 (254)
Q Consensus 89 ~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~ 122 (254)
.-.+..+.++++.+ .+++|||.+.+.|++
T Consensus 21 ~RP~v~i~I~G~~~-----~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 21 PEPRITLKVGGQPV-----TFLVDTGAQHSVLTQ 49 (132)
T ss_dssp CSSEEEEEETTEEE-----EEEECTTCSSCEECS
T ss_pred CCCEEEEEECCEEE-----EEEEeCCCCeEEEcc
Confidence 33445588999755 689999999999886
No 56
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=29.37 E-value=50 Score=27.56 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=22.3
Q ss_pred CCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 86 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 86 ~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
..|.++ |+||.+. ..+++|||++.+.+|..
T Consensus 17 ~~Y~~~---i~iG~Q~-----~~v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAGI---TKIGNQN-----FLTVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEEE---EEETTEE-----EEEEEETTCCCEEEECT
T ss_pred CEEEEE---EEECCEE-----EEEEEeCCCcceEEecC
Confidence 456654 5688443 47899999999999964
No 57
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=28.47 E-value=50 Score=28.72 Aligned_cols=46 Identities=13% Similarity=0.275 Sum_probs=30.1
Q ss_pred CCceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 71 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 71 ~~i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
..-.-.|+.+... ...|.++ |.+|.- .....+++|||++++.+|-+
T Consensus 6 ~~~~~~pv~~d~~-~~~Y~~~---i~iGTP---pq~~~v~~DTGS~~lWv~c~ 51 (413)
T 3vla_A 6 PSALVVPVKKDAS-TLQYVTT---INQRTP---LVSENLVVDLGGRFLWVDCD 51 (413)
T ss_dssp CSEEEEEEEECTT-TCCEEEE---EEETTT---TEEEEEEEETTCSSEEEECS
T ss_pred CccEEEEeeecCC-CCeEEEE---EEcCCC---CcceEEEEeCCChhhhcccC
Confidence 3445578877642 3456544 447752 12358999999999999963
No 58
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=28.07 E-value=78 Score=26.28 Aligned_cols=32 Identities=28% Similarity=0.376 Sum_probs=22.7
Q ss_pred CCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 86 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 86 ~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
..|.+ .|.||.- .....+++|||++.+.+|..
T Consensus 15 ~~Y~~---~i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 15 DAYIT---PVQIGTP---AQTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp CCEEE---EEEETTT---TEEEEEEEETTCCCEEECBT
T ss_pred CEEEE---EEEECCC---CeEEEEEECCCCCCeEEecC
Confidence 55665 4668841 11347899999999999975
No 59
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=27.86 E-value=74 Score=26.40 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=23.5
Q ss_pred CCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChHHH
Q 025328 86 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVY 125 (254)
Q Consensus 86 ~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~~~ 125 (254)
..|.+ .|.||.- .....+++|||++.+.+|..-.
T Consensus 15 ~~Y~~---~i~iGTP---~Q~~~v~~DTGSs~lWv~~~~C 48 (329)
T 3c9x_A 15 SEYIT---SVSIGTP---AQVLPLDFDTGSSDLWVFSSET 48 (329)
T ss_dssp CCEEE---EEEETTT---TEEEEEEEETTCCCEEECBTTS
T ss_pred CEEEE---EEEECCC---CeEEEEEEcCCCCCeEEecCCC
Confidence 45664 4668841 1124789999999999998643
No 60
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=26.45 E-value=35 Score=28.20 Aligned_cols=32 Identities=22% Similarity=0.417 Sum_probs=22.5
Q ss_pred CCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 86 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 86 ~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
..|.++ |.||.- .....+++|||++.+.+|..
T Consensus 11 ~~Y~~~---i~iGtP---~Q~~~v~~DTGSs~~Wv~~~ 42 (320)
T 4aa9_A 11 SQYFGK---IYIGTP---PQEFTVVFDTGSSDLWVPSI 42 (320)
T ss_dssp CCCEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred CEEEEE---EEECCC---CeEEEEEEeCCCCceEEcCC
Confidence 456654 558741 12347899999999999975
No 61
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=25.20 E-value=44 Score=27.89 Aligned_cols=32 Identities=19% Similarity=0.316 Sum_probs=22.4
Q ss_pred CCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 86 KHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 86 ~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
..|.++ |.||.- .....+++|||++.+.+|..
T Consensus 12 ~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 12 VTYAAD---ITVGSN---NQKLNVIVDTGSSDLWVPDV 43 (342)
T ss_dssp SSEEEE---EEETTT---TEEEEEEEETTCCCEEEEEE
T ss_pred cEEEEE---EEEcCC---CcEEEEEEECCCcceEEEcC
Confidence 567655 458741 11347899999999999864
No 62
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=23.90 E-value=37 Score=29.00 Aligned_cols=43 Identities=23% Similarity=0.308 Sum_probs=28.1
Q ss_pred ceEEecccCCCCCCCeEEeeeEEEECCEEecCCCCeEEEecCCccEEeChH
Q 025328 73 VAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSR 123 (254)
Q Consensus 73 i~~~pi~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lp~~ 123 (254)
+...|+.... +..|.++ |+||.- .....+++|||++.+.+|..
T Consensus 45 ~~~~~l~n~~--d~~Y~~~---i~iGTP---pQ~~~v~~DTGSs~lWV~s~ 87 (370)
T 3psg_A 45 IGDEPLENYL--DTEYFGT---IGIGTP---AQDFTVIFDTGSSNLWVPSV 87 (370)
T ss_dssp SCCCTTGGGT--TCCEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred cceecceecc--CCEEEEE---EEEcCC---CCEEEEEEeCCCCccEEECC
Confidence 4555665432 3456654 558851 12347899999999999974
Done!