BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025333
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P37545|YABD_BACSU Uncharacterized deoxyribonuclease YabD OS=Bacillus subtilis (strain
168) GN=yabD PE=3 SV=1
Length = 255
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 47/222 (21%)
Query: 22 LKEFFEITPAAAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGD 81
+KE A+GE+GLD D Q VFR Q+ LAKE+ P IH A D
Sbjct: 78 IKELSAHEKVVAIGEMGLDYHWDKSPKDI--QKEVFRNQIALAKEVNLPIIIHNRDATED 135
Query: 82 LLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPS 141
++ I+K G G I+H + GSAE+ E K+ Y SF G + A+K K+++K +P+
Sbjct: 136 VVTILKEEGAEAVGGIMHCFTGSAEVARECMKMNFYLSFGGPVTFKNAKKPKEVVKEIPN 195
Query: 142 ERILLETDAPDALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSST 201
+R+L+ETD P FL P K
Sbjct: 196 DRLLIETDCP-----------FLT------PHPFRGKR---------------------- 216
Query: 202 LPKETLNHPANIHNVLDYVASLLDMTKEELAELSYRNAIRLF 243
N P+ + V + +A L +MT EE+A ++ NA RLF
Sbjct: 217 ------NEPSYVKYVAEQIAELKEMTFEEIASITTENAKRLF 252
>sp|Q148G4|TATD1_BOVIN Putative deoxyribonuclease TATDN1 OS=Bos taurus GN=TATDN1 PE=2 SV=1
Length = 297
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 31 AAAVGEIGLDKGSKGREIDFMD---QVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMK 87
A+GE GLD + F Q+ F +Q EL+++ K P +HC + + L+IM+
Sbjct: 107 VVAIGECGLDFD----RLQFCSKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMR 162
Query: 88 SVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLE 147
G ++HS+ G+ E L LG Y F+G S+K + ++LK +PSE++++E
Sbjct: 163 RNRDRCVGGVVHSFDGTKEAAAALMDLGLYIGFNG--CSLKTEANLEVLKSIPSEKLMIE 220
Query: 148 TDAP-DALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKET 206
TDAP + S ++ P+ K E+ H KD
Sbjct: 221 TDAPWCGVKNTHAGSKYIKTSFPT-----KKKWENG-----------HCLKDR------- 257
Query: 207 LNHPANIHNVLDYVASLLDMTKEELAELSYRNAIRLF 243
N P +I +L+ ++++ D ELA Y N I++F
Sbjct: 258 -NEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKIF 293
>sp|Q93075|TATD2_HUMAN Putative deoxyribonuclease TATDN2 OS=Homo sapiens GN=TATDN2 PE=1
SV=2
Length = 761
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 31 AAAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVG 90
A A GE+GLD K +Q VF +QL+LA LK+P IHC A DLLEIMK
Sbjct: 588 AVAFGEMGLDYSYKC-TTPVPEQHKVFERQLQLAVSLKKPLVIHCREADEDLLEIMKKFV 646
Query: 91 PFPDGVIIHSYLGSAEMVPELSKLGAYF-----SFSGFLMSMKAQKAKKMLKVVPSERIL 145
P + H + GS P + L YF F+ L A +A++ L+ +P ERI+
Sbjct: 647 PPDYKIHRHCFTGS---YPVIEPLLKYFPNMSVGFTAVLTYSSAWEAREALRQIPLERII 703
Query: 146 LETDAPDALPKAELNSL 162
+ETDAP LP+ SL
Sbjct: 704 VETDAPYFLPRQVPKSL 720
>sp|Q6P1N9|TATD1_HUMAN Putative deoxyribonuclease TATDN1 OS=Homo sapiens GN=TATDN1 PE=1
SV=2
Length = 297
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 34/217 (15%)
Query: 31 AAAVGEIGLDKGSKGREIDFM---DQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMK 87
A+GE GLD + F Q+ F +Q EL+++ K P +HC + + L+IMK
Sbjct: 107 VVAIGECGLDFD----RLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMK 162
Query: 88 SVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLE 147
G ++HS+ G+ E L L Y F+G S+K + ++LK +PSE++++E
Sbjct: 163 RNRDRCVGGVVHSFDGTKEAAAALIDLDLYIGFNG--CSLKTEANLEVLKSIPSEKLMIE 220
Query: 148 TDAP-DALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKET 206
TDAP + S ++ P+ + S H KD
Sbjct: 221 TDAPWCGVKSTHAGSKYIRTAFPTKKKWESG----------------HCLKDR------- 257
Query: 207 LNHPANIHNVLDYVASLLDMTKEELAELSYRNAIRLF 243
N P +I +L+ ++++ D ELA Y N I++F
Sbjct: 258 -NEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVF 293
>sp|Q6P8M1|TATD1_MOUSE Putative deoxyribonuclease TATDN1 OS=Mus musculus GN=Tatdn1 PE=2
SV=1
Length = 295
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 34/217 (15%)
Query: 31 AAAVGEIGLDKGSKGREIDFM---DQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMK 87
A+GE GLD + F Q+ F +Q EL+++ + P +HC + + L+IM+
Sbjct: 107 VVAIGECGLDFD----RLQFCPKDTQLKYFEKQFELSEQTQLPMFLHCRNSHTEFLDIMR 162
Query: 88 SVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLE 147
G ++HS+ G+ E L LG Y F+G S+K + ++LK +PSE++++E
Sbjct: 163 RNRDRYVGGVVHSFDGTKEAAAALVDLGLYIGFNG--CSLKTEANLEVLKSIPSEKLMIE 220
Query: 148 TDAP-DALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKET 206
TDAP + S ++ + S P + K E+ H KD
Sbjct: 221 TDAPWCGVKSTHAGSKYI---NTSFPTK--KKWENG-----------HCLKDR------- 257
Query: 207 LNHPANIHNVLDYVASLLDMTKEELAELSYRNAIRLF 243
N P +I +L+ ++++ + ELA Y N I++F
Sbjct: 258 -NEPCHIIQILEIMSAVREEDPLELANTLYNNTIKVF 293
>sp|Q05AV0|TAT3A_XENLA Putative deoxyribonuclease tatdn3-A OS=Xenopus laevis GN=tatdn3-a
PE=2 SV=1
Length = 270
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 61/225 (27%)
Query: 32 AAVGEIGLD------KGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEI 85
A+GEIGLD S+ RE +Q+ VF+ QLE+AK + P ++H A +
Sbjct: 99 VAIGEIGLDFTPWLAPTSEQRE----EQMKVFQMQLEMAKRMDLPVNVHSRSAGRQTVSF 154
Query: 86 MKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERIL 145
+K G + V++H++ G E + G +FSF ++ + ++ KK++K++P E I
Sbjct: 155 LKEQGA--EKVLLHNFAGRPSAAQEGVQAGYFFSFPPAVI--RNEQRKKLIKMIPLENIC 210
Query: 146 LETDAPDALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKE 205
LETD+P PK KE
Sbjct: 211 LETDSPSLGPK-----------------------------------------------KE 223
Query: 206 TLNHPANIHNVLDYVASLLDMTKEELAELSYRNAIRLFSYEGSKI 250
N P+NI +Y+AS+ + E + E++ NA+RLF K+
Sbjct: 224 DRNVPSNIRLSCEYIASVKGLMPERVREVTTLNALRLFPKVSCKL 268
>sp|D8MKW4|TATD_ERWBE Tat-linked quality control protein TatD OS=Erwinia billingiae
(strain Eb661) GN=tatD PE=3 SV=1
Length = 261
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 20 STLKEFFEITPAAAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAF 79
+TLK E A+GE GLD E + QV F QLELA EL P +HC A
Sbjct: 76 ATLKRLAESPEVVAIGECGLDFNRNISEPE--QQVYAFNAQLELAAELAMPVFLHCRDAH 133
Query: 80 GDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKV 138
L ++ P G ++H + G+ E + G +G++ + + ++++ +
Sbjct: 134 DRFLAVLTPWLPTLPGAVVHCFTGTREELEACLAAGLSIGITGWVCDERRGVELRELMPL 193
Query: 139 VPSERILLETDAPDALPK 156
+P++R+LLETDAP LP+
Sbjct: 194 IPADRLLLETDAPYLLPR 211
>sp|E6WHK1|TATD_PANSA Tat-linked quality control protein TatD OS=Pantoea sp. (strain
At-9b) GN=tatD PE=3 SV=1
Length = 260
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 20 STLKEFFEITPAAAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAF 79
+TL+ E A+GE GLD D Q F QL+LA EL+ P +HC A
Sbjct: 76 NTLRRLAESEQVVAIGECGLDFNRNFSAHD--QQEYAFDAQLQLAAELQLPVFLHCREAH 133
Query: 80 GDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKV 138
I++ P G + H + G+ E + +G +G++ + + +++L +
Sbjct: 134 DRFAAILQPWLPKLVGAVAHCFTGTREELEACLAMGLSIGITGWVCDERRGMELRELLPL 193
Query: 139 VPSERILLETDAPDALPK 156
+P+ER+LLETDAP LP+
Sbjct: 194 IPAERLLLETDAPWLLPR 211
>sp|Q640V9|TATD1_XENLA Putative deoxyribonuclease TATDN1 OS=Xenopus laevis GN=tatdn1 PE=2
SV=1
Length = 297
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 31 AAAVGEIGLDKGSKGREIDFMD---QVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMK 87
AVGE GLD ++F Q+ F +Q +LA+ + P +HC A + LEIM+
Sbjct: 107 VVAVGECGLDFD----RLEFCSKETQLKYFEKQFDLAERSRLPMFLHCRNAHKEFLEIMQ 162
Query: 88 SVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLE 147
G ++HS+ G+ E + L Y +G S+K + +LK +PSER+++E
Sbjct: 163 RNRDRCVGGVVHSFDGTKEDAEAIIALDLYIGING--CSLKTESNLDVLKSIPSERLMIE 220
Query: 148 TDAP-DALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKET 206
TDAP + S + P+ + S H KD
Sbjct: 221 TDAPWCGVKNTHAGSKLVKTTFPTKKKWESG----------------HCLKDR------- 257
Query: 207 LNHPANIHNVLDYVASLLDMTKEELAELSYRNAIRLF 243
N P +I VL+ +AS + EL++ Y N ++LF
Sbjct: 258 -NEPCHIIQVLEIMASAREEEPLELSKTLYNNTLKLF 293
>sp|P73335|Y1786_SYNY3 Uncharacterized deoxyribonuclease sll1786 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=sll1786 PE=3 SV=1
Length = 261
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 33 AVGEIGLDK-GSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSV-- 89
A+GE+GLD + R+ Q+ VFR QL +A+EL +P IHC A + +++
Sbjct: 91 AIGEMGLDFFKADNRD----HQIEVFRAQLAIARELNKPVIIHCRDAAQTMRQVLTDFQA 146
Query: 90 --GPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLE 147
GP ++H + G+ E LG Y SFSG + KA+ + ++VP +R+L+E
Sbjct: 147 ESGPV--AGVMHCWGGTPEETQWFLDLGFYISFSGTVTFKKAEGIQASAQMVPPDRLLVE 204
Query: 148 TDAP 151
TD P
Sbjct: 205 TDCP 208
>sp|B2VG45|TATD_ERWT9 Tat-linked quality control protein TatD OS=Erwinia tasmaniensis
(strain DSM 17950 / Et1/99) GN=tatD PE=3 SV=1
Length = 259
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 20 STLKEFFEITPAAAVGEIGLDKGSKGREIDFMD---QVGVFRQQLELAKELKRPASIHCV 76
+TL+ E A+GE GLD +F D Q F QL LA EL P +HC
Sbjct: 76 ATLRRLAESPQMVAIGECGLDFNR-----NFSDPEQQAYAFNAQLALAAELSLPVFLHCR 130
Query: 77 RAFGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKM 135
A + I+K P ++H + G+ + G + +G++ + Q+ +++
Sbjct: 131 EAHERFISILKPWLPKLKAAVLHCFTGTRPELESCLAEGLFIGITGWICDERRGQELREL 190
Query: 136 LKVVPSERILLETDAPDALPK 156
+ ++P++R+LLETDAP LP+
Sbjct: 191 MPLIPADRLLLETDAPWLLPR 211
>sp|P44718|Y454_HAEIN Uncharacterized deoxyribonuclease HI_0454 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0454
PE=3 SV=1
Length = 260
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 47/211 (22%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GEIGLD + Q VF Q+++A +L +P IH A D + +++
Sbjct: 92 AIGEIGLDYYYSAD--NKAAQQAVFGSQIDIANQLDKPVIIHTRSAGDDTIAMLRQHRAE 149
Query: 93 PDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLETDAPD 152
G +IH + + E + LG Y S SG + A+ +++++ VP ER+L+ETD+P
Sbjct: 150 KCGGVIHCFTETMEFXKKALDLGFYISCSGIVTFKNAEAIREVIRYVPMERLLVETDSPY 209
Query: 153 ALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKETLNHPAN 212
P P G KE N PA
Sbjct: 210 LAP--------------------------VPYRG-----------------KE--NQPAY 224
Query: 213 IHNVLDYVASLLDMTKEELAELSYRNAIRLF 243
V +YVA+L ++ E A+++ +N RLF
Sbjct: 225 TREVCEYVATLKGVSAEAFAQITTQNFERLF 255
>sp|D4ICL5|TATD_ERWAE Tat-linked quality control protein TatD OS=Erwinia amylovora
(strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3) GN=tatD
PE=3 SV=1
Length = 259
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 20 STLKEFFEITPAAAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAF 79
+TL+ E A+GE GLD + + QV F QL LA EL P +HC A
Sbjct: 76 ATLRRLAESPLVVAIGECGLDFNRNFSQPE--QQVYAFNAQLALAAELSLPVFLHCREAH 133
Query: 80 GDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKV 138
+ I+K P ++H + G+ + G +G++ + Q+ ++++ +
Sbjct: 134 ERFITILKPWLPSLKAAVLHCFTGARAELESCLAEGLSIGITGWICDERRGQELRELVPL 193
Query: 139 VPSERILLETDAPDALPK 156
+P++R+LLETDAP LP+
Sbjct: 194 IPADRLLLETDAPWLLPR 211
>sp|P0AFQ7|YCFH_ECOLI Uncharacterized deoxyribonuclease YcfH OS=Escherichia coli (strain
K12) GN=ycfH PE=1 SV=1
Length = 265
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 55/222 (24%)
Query: 33 AVGEIGLDK----GSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKS 88
A+GE GLD +K R Q F +++ +EL +P +H A D L I++
Sbjct: 91 ALGETGLDYYYTPETKVR------QQESFIHHIQIGRELNKPVIVHTRDARADTLAILRE 144
Query: 89 VGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLET 148
G ++H + E +L LG Y SFSG + A++ + + VP +R+L+ET
Sbjct: 145 EKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVET 204
Query: 149 DAPDALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKETLN 208
D+P P P+ G KE N
Sbjct: 205 DSPYLAP--------------------------VPHRG-----------------KE--N 219
Query: 209 HPANIHNVLDYVASLLDMTKEELAELSYRNAIRLFSYEGSKI 250
PA + +V +Y+A L + EELA+++ N RLF + S++
Sbjct: 220 QPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRL 261
>sp|P0AFQ8|YCFH_ECOL6 Uncharacterized deoxyribonuclease YcfH OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=ycfH PE=3 SV=1
Length = 265
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 55/222 (24%)
Query: 33 AVGEIGLDK----GSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKS 88
A+GE GLD +K R Q F +++ +EL +P +H A D L I++
Sbjct: 91 ALGETGLDYYYTPETKVR------QQESFIHHIQIGRELNKPVIVHTRDARADTLAILRE 144
Query: 89 VGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLET 148
G ++H + E +L LG Y SFSG + A++ + + VP +R+L+ET
Sbjct: 145 EKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVET 204
Query: 149 DAPDALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKETLN 208
D+P P P+ G KE N
Sbjct: 205 DSPYLAP--------------------------VPHRG-----------------KE--N 219
Query: 209 HPANIHNVLDYVASLLDMTKEELAELSYRNAIRLFSYEGSKI 250
PA + +V +Y+A L + EELA+++ N RLF + S++
Sbjct: 220 QPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRL 261
>sp|P0AFQ9|YCFH_ECO57 Uncharacterized deoxyribonuclease YcfH OS=Escherichia coli O157:H7
GN=ycfH PE=3 SV=1
Length = 265
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 55/222 (24%)
Query: 33 AVGEIGLDK----GSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKS 88
A+GE GLD +K R Q F +++ +EL +P +H A D L I++
Sbjct: 91 ALGETGLDYYYTPETKVR------QQESFIHHIQIGRELNKPVIVHTRDARADTLAILRE 144
Query: 89 VGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLET 148
G ++H + E +L LG Y SFSG + A++ + + VP +R+L+ET
Sbjct: 145 EKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVET 204
Query: 149 DAPDALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKETLN 208
D+P P P+ G KE N
Sbjct: 205 DSPYLAP--------------------------VPHRG-----------------KE--N 219
Query: 209 HPANIHNVLDYVASLLDMTKEELAELSYRNAIRLFSYEGSKI 250
PA + +V +Y+A L + EELA+++ N RLF + S++
Sbjct: 220 QPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRL 261
>sp|Q8K9J1|Y343_BUCAP Uncharacterized deoxyribonuclease BUsg_343 OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=BUsg_343 PE=3
SV=1
Length = 264
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Query: 3 WVCFIFRFVQERTPNWFSTLKEFFEITPAAAVGEIGLDKGSKGREIDFMDQVGVFRQQLE 62
+ C I ++ + LK+ A+GE GLD + ++ FR+ +
Sbjct: 67 YSCGIHPLYCQKEIECLNELKKLSYDKCVIALGETGLDYYYSFETKNLQEKF--FREHIR 124
Query: 63 LAKELKRPASIHCVRAFGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSG 122
+A L +P IH A D ++I+K G I+HS+ S + EL +G Y SFSG
Sbjct: 125 IAITLNKPIIIHSRNAIKDTIKILKEENAEKCGGILHSFTESEKSAFELLDMGFYISFSG 184
Query: 123 FLMSMKAQKAKKMLKVVPSERILLETDAPDALP 155
+ K+ + LK +P E++L+ETD+P P
Sbjct: 185 IITFKKSIELCNTLKKIPLEKLLIETDSPYLAP 217
>sp|E1SKR8|TATD_PANVC Tat-linked quality control protein TatD OS=Pantoea vagans (strain
C9-1) GN=tatD PE=3 SV=1
Length = 260
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 20 STLKEFFEITPAAAVGEIGLDKGSKGREIDFMDQVG-VFRQQLELAKELKRPASIHCVRA 78
STL+ E A+GE GLD R + +Q F QL LA EL P +HC A
Sbjct: 76 STLRRLAEKPEVVAIGECGLDFN---RNLSAHEQQEYAFDAQLALAAELNMPVFLHCREA 132
Query: 79 FGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLK 137
+++ P G +IH + G+ + + +G +G++ + + +++L
Sbjct: 133 HARFAAVLEPWLPKLAGAVIHCFTGTRDELEACLAMGLSVGITGWVCDERRGLELRELLP 192
Query: 138 VVPSERILLETDAPDALPK 156
++P++R+LLETDAP LP+
Sbjct: 193 LIPADRLLLETDAPYLLPR 211
>sp|D4GGR2|TATD_PANAM Tat-linked quality control protein TatD OS=Pantoea ananatis (strain
LMG 20103) GN=tatD PE=3 SV=2
Length = 260
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 20 STLKEFFEITPAAAVGEIGLDKGSKGREID-FMDQVGVFRQQLELAKELKRPASIHCVRA 78
+TL+ E A+GE GLD R + Q F QL LA EL P +HC A
Sbjct: 76 NTLRRLAEKKDVVAIGECGLDFN---RNLSAHQQQEYAFDAQLALAAELNMPVFLHCREA 132
Query: 79 FGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKA-KKMLK 137
+++ P +IH + G+ E + +G +G++ + A ++ML
Sbjct: 133 HERFAAVLEPWLPKLPAAVIHCFTGTREELTACLDMGLSVGITGWVCDERRGIALREMLP 192
Query: 138 VVPSERILLETDAPDALPK 156
++P+ER+LLETDAP LP+
Sbjct: 193 LIPAERLLLETDAPYLLPR 211
>sp|A4WFX9|TATD_ENT38 Tat-linked quality control protein TatD OS=Enterobacter sp. (strain
638) GN=tatD PE=3 SV=2
Length = 260
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 15/143 (10%)
Query: 21 TLKEFFEITPAAAVGEIGLDKGSKGREIDF---MDQVGVFRQQLELAKELKRPASIHCVR 77
TL + + A+GE GLD +F ++Q F QL +A EL+ P +HC
Sbjct: 76 TLYKLAKTEEVVAIGECGLDFNR-----NFSTPVEQEAAFTAQLAIAAELEMPVFMHCRD 130
Query: 78 AFGDLLEIMKSVGPFPD---GVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAK 133
A L +++ P+ D G ++H + GS + E G Y +G++ + + +
Sbjct: 131 AHERFLTLLE---PWRDKLPGAVLHCFTGSRQEAVECLNRGLYLGITGWVCDERRGLELR 187
Query: 134 KMLKVVPSERILLETDAPDALPK 156
++L V+P++R+L+ETDAP LP+
Sbjct: 188 ELLPVIPADRLLVETDAPYLLPR 210
>sp|A7MQN1|TATD_CROS8 Tat-linked quality control protein TatD OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=tatD PE=3 SV=2
Length = 263
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GE GLD +Q F +QL LA EL P +HC A L ++ P+
Sbjct: 88 AIGECGLDFNRNFSTP--AEQEHAFTEQLRLAAELALPVFLHCRDAHARFLALLD---PW 142
Query: 93 PD---GVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKVVPSERILLET 148
D G ++H + G+ + E G Y +G++ + + + +L V+P++R+LLET
Sbjct: 143 LDKLPGAVLHCFTGTEQEARETMARGLYLGITGWVCDERRGLELRALLPVIPADRLLLET 202
Query: 149 DAPDALPK 156
DAP LP+
Sbjct: 203 DAPYLLPR 210
>sp|A8ACY8|TATD_CITK8 Tat-linked quality control protein TatD OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=tatD
PE=3 SV=2
Length = 260
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GE GLD +Q F+ QL +A EL+ P +HC A L +++ P+
Sbjct: 88 AIGECGLDFNRNFSTP--QEQERAFQAQLRIAAELQMPVFMHCRDAHARFLALLE---PW 142
Query: 93 PD---GVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKVVPSERILLET 148
D G ++H + G+ E + E G Y +G++ + + +++L +P+E++L+ET
Sbjct: 143 LDKLPGAVLHCFTGTREEMQECIDRGLYIGITGWVCDERRGLELRELLPFIPAEKLLIET 202
Query: 149 DAPDALPK 156
DAP LP+
Sbjct: 203 DAPYLLPR 210
>sp|D0Z9R0|TATD_EDWTE Tat-linked quality control protein TatD OS=Edwardsiella tarda
(strain EIB202) GN=tatD PE=3 SV=1
Length = 260
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
AVGE GLD Q F QL LA ++ +P +HC A + +++
Sbjct: 89 AVGECGLDFARNFSTP--AQQEAAFEAQLALAAQIGKPVFLHCREAHARFIALLRPWLSR 146
Query: 93 PDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKVVPSERILLETDAP 151
G ++H + G+ + + LG Y +G++ + + +L +P+ER+LLETDAP
Sbjct: 147 LPGAVLHCFTGTRDELDACLSLGLYIGITGWICDERRGMPLRALLPHIPAERLLLETDAP 206
Query: 152 DALPK 156
LP+
Sbjct: 207 YLLPR 211
>sp|E8XYF5|TATD_RAHSY Tat-linked quality control protein TatD OS=Rahnella sp. (strain
Y9602) GN=tatD PE=3 SV=1
Length = 263
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 50/232 (21%)
Query: 22 LKEFFEITPAAAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRA--- 78
++E + A+GE GLD D Q F QL LAKEL+ P +HC A
Sbjct: 78 IRELAVLPNVVAIGECGLDFNRNFSPAD--RQEAAFTAQLALAKELQLPVFLHCRDAGER 135
Query: 79 FGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLK 137
F LL+ S P G ++H + G+ + + LG +G++ + + + ML
Sbjct: 136 FATLLKPWLSDLP---GGVVHCFTGTRQELELYLSLGLSIGITGWVCDERRGLELRDMLP 192
Query: 138 VVPSERILLETDAPDALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASK 197
++P++R++LETDAP LP +
Sbjct: 193 LIPADRLMLETDAPYLLP-----------------------------------------R 211
Query: 198 DSSTLPKETLNHPANIHNVLDYVASLLDMTKEELAELSYRNAIRLFSYEGSK 249
D PK N PA + +++ VA + LA+++ NA +LF+ +
Sbjct: 212 DMENKPKNRRNEPAFLPHIVKQVALWRGEDPQWLADITDDNARKLFALSARR 263
>sp|D2TUZ4|TATD_CITRI Tat-linked quality control protein TatD OS=Citrobacter rodentium
(strain ICC168) GN=tatD PE=3 SV=1
Length = 263
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GE GLD + F QL +A EL+ P +HC A L ++ P+
Sbjct: 88 AIGECGLDFNRNFSTPQAQEHA--FEAQLRIAAELQMPVFMHCRDAHTRFLALLD---PW 142
Query: 93 PD---GVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKA-KKMLKVVPSERILLET 148
D G ++H + G+ + + E + G Y +G++ + A +++L ++P+E++L+ET
Sbjct: 143 LDKLPGAVLHCFTGTRQEMQECLERGLYIGITGWVCDERRGLALRELLPLIPTEKLLIET 202
Query: 149 DAPDALPK 156
DAP LP+
Sbjct: 203 DAPYLLPR 210
>sp|P57436|Y355_BUCAI Uncharacterized deoxyribonuclease BU355 OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=BU355 PE=3
SV=1
Length = 264
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 17 NWFSTLKEFFEITPAAAVGEIGLDK--GSKGREIDFMDQVGVFRQQLELAKELKRPASIH 74
N + +K+ I A+GE GLD S ++I Q FR+ + +A +LK+P +H
Sbjct: 83 NLSNEIKKLSCIKDVIALGETGLDYYYSSDTKKI----QQDFFREHIRVAIKLKKPIIVH 138
Query: 75 CVRAFGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKK 134
A D ++I++ ++HS+ G +L LG Y S SG + + + K
Sbjct: 139 SRNASEDTIKILQEENAEKCKGVLHSFTGDYNTACKLLDLGFYISCSGIITFKNSLELCK 198
Query: 135 MLKVVPSERILLETDAPDALP 155
++ +P R+L+ETD+P P
Sbjct: 199 TIRKIPLNRLLIETDSPYLSP 219
>sp|Q9PRC8|Y017_UREPA Uncharacterized deoxyribonuclease UU017 OS=Ureaplasma parvum
serovar 3 (strain ATCC 700970) GN=UU017 PE=3 SV=1
Length = 265
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 12/131 (9%)
Query: 32 AAVGEIGLDK-GSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVG 90
+ +GE GLD + + DF Q F++ +ELAK+ +P +H A D + I+K +
Sbjct: 93 SCIGECGLDYYHEQNYDHDF--QKHWFKKHIELAKKYHKPLMLHIRNAHDDAIAILKELA 150
Query: 91 PFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKM------LKVVPSERI 144
VIIH + E + ++G Y S+ G +++ K K ++ +K+ P ++I
Sbjct: 151 --VQDVIIHCFTDKKEYAQQYIEMGYYISYPG-VITFKPTKNNQLHELYEAIKITPLDKI 207
Query: 145 LLETDAPDALP 155
L+ETDAP P
Sbjct: 208 LVETDAPYLTP 218
>sp|Q89AG7|Y325_BUCBP Uncharacterized deoxyribonuclease bbp_325 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=bbp_325 PE=3
SV=1
Length = 265
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 22 LKEFFEITPAAAVGEIGLD--KGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAF 79
LK++ A+GE GLD + + +++ Q +FR+ ++ + LK+P IH +
Sbjct: 81 LKKYSNNEKVVAIGETGLDYYRNNDNKKL----QQILFREHIKTSITLKKPLLIHTRNSI 136
Query: 80 GDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVV 139
D + I+K ++HS+ L +G Y SFSG + ++ + K V
Sbjct: 137 NDTINILKEENSKQCIGVLHSFTEDMHSARILLNMGFYISFSGIVTFKNSKIVHETAKFV 196
Query: 140 PSERILLETDAPDALP 155
P +RIL+ETD+P P
Sbjct: 197 PIDRILIETDSPYLSP 212
>sp|Q9L6M2|TATD_SALTY Tat-linked quality control protein TatD OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=tatD PE=3 SV=1
Length = 260
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GE GLD +Q F+ QL++A EL+ P +HC A L ++ P+
Sbjct: 88 AIGECGLDFNRNFSTPQ--EQERAFQAQLQIAAELQIPIFMHCRDAHERFLVLLD---PW 142
Query: 93 PD---GVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKVVPSERILLET 148
D G I+H + GS + + G Y +G++ + + +++L +P+E++L+ET
Sbjct: 143 LDSLPGAILHCFTGSRQQMQACVDRGLYIGITGWVCDERRGLELRELLPFIPAEKLLIET 202
Query: 149 DAPDALPK 156
DAP LP+
Sbjct: 203 DAPYLLPR 210
>sp|P44500|Y081_HAEIN Uncharacterized deoxyribonuclease HI_0081 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0081
PE=3 SV=1
Length = 262
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 10 FVQERTPNWFSTLKEFFEI--TPAAAVGEIGLDKGSKGREID--FMDQVGVFRQQLELAK 65
++QE N L++ + T AV EIGL++ D + Q F QL LAK
Sbjct: 70 YIQEHAENDLILLEQALKNRDTNCTAVAEIGLERAIPDLLTDELWAKQCHFFESQLYLAK 129
Query: 66 ELKRPASIHCVRAFGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLM 125
+ P +IH + + +K + P ++H + GS + LG G +
Sbjct: 130 QFNLPVNIHSRKTHDQIFTFLKRI-PLSKLGVVHGFSGSYDQAKRFVDLGYKIGVGGTIT 188
Query: 126 SMKAQKAKKMLKVVPSERILLETDAPDALPKAELNSLFLVDGDPSLPQEL 175
+A K ++ + +P + ++LETD+PD +P +F G P+ P+ +
Sbjct: 189 YERANKTRQAIAKLPLDALVLETDSPD-MP------VFGFQGQPNRPERI 231
>sp|A8G8C4|TATD_SERP5 Tat-linked quality control protein TatD OS=Serratia proteamaculans
(strain 568) GN=tatD PE=3 SV=1
Length = 260
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 32 AAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGP 91
AA+GE GLD + Q F QL LA EL P +HC A ++ P
Sbjct: 88 AAIGECGLDFNRNFSTPE--QQEAAFSAQLALAAELSMPVFLHCRDAHARFAALL---AP 142
Query: 92 FPD---GVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKVVPSERILLE 147
+ D ++H + G+AE + LG +G++ + + + +L +P++R+LLE
Sbjct: 143 WLDKLPAAVVHCFTGTAEELESCLSLGLSVGITGWVCDERRGLELRALLPQIPADRLLLE 202
Query: 148 TDAPDALPK 156
TDAP LP+
Sbjct: 203 TDAPYLLPR 211
>sp|Q9UUF1|YNF8_SCHPO Deoxyribonuclease Tat-D OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pi038 PE=3 SV=1
Length = 312
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 24/190 (12%)
Query: 57 FRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGP-FPDGVIIHSYLGSAEMVPELSKLG 115
F +QL++A ++ P +H A D I++ P P ++HS+ GS + + + G
Sbjct: 144 FEEQLKVAVRVQLPLFLHSRNAENDFFAILEKYLPELPKKGVVHSFTGSIDEMRRCIEHG 203
Query: 116 AYFSFSGFLMSMKAQKAKKMLKVVPSERILLETDAPDA-LPKAELNSLFLVDGDPSLPQE 174
Y +G S+K ++ ++++ +P E++LLETDAP + + FL LP +
Sbjct: 204 LYVGVNG--CSLKTEENLEVVRAIPLEKMLLETDAPWCEVRPSHAGHQFL---KTKLPFD 258
Query: 175 LSAKEEHSPNVGSASDNQFHASKDSSTLPKETLNHPANIHNVLDYVASLLDMTKEELAEL 234
KE N+ P N + V + VA+L D++ EEL+E
Sbjct: 259 SCKKERFKEGCMIRGRNE-----------------PCNTYIVAEIVAALKDISLEELSEQ 301
Query: 235 SYRNAIRLFS 244
+ N+I L S
Sbjct: 302 IWENSINLLS 311
>sp|Q503T5|TATD3_DANRE Putative deoxyribonuclease tatdn3 OS=Danio rerio GN=tatdn3 PE=2
SV=1
Length = 266
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 57/217 (26%)
Query: 32 AAVGEIGLD----KGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMK 87
A+GEIGLD S +E D +Q+ VF +QLE++KEL P ++H + + MK
Sbjct: 99 VAIGEIGLDFTPWYSSITQERD--EQMKVFIKQLEISKELDLPVNVHSRSSAKVTIATMK 156
Query: 88 SVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLE 147
+G ++H++ G + E + G FSF +S Q+A K+++ +P E + LE
Sbjct: 157 ELG--IRQALLHNFAGKPSVAMEGVQAGFCFSFPP-AVSKNEQRA-KLIRQIPLEHVCLE 212
Query: 148 TDAPDALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKETL 207
TD SP +G L K
Sbjct: 213 TD--------------------------------SPALG---------------LDKHVR 225
Query: 208 NHPANIHNVLDYVASLLDMTKEELAELSYRNAIRLFS 244
N P+N+ +Y+A + ++ + + E++ +NA+RLFS
Sbjct: 226 NEPSNVTISCEYIAKVKGISSDVVMEVTTQNALRLFS 262
>sp|Q0SZ31|TATD_SHIF8 Tat-linked quality control protein TatD OS=Shigella flexneri
serotype 5b (strain 8401) GN=tatD PE=3 SV=1
Length = 260
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GE GLD + +Q F QL +A EL P +HC A + +++ P+
Sbjct: 88 AIGECGLDFNRNFSTPE--EQERAFVAQLRIAAELNMPVFMHCRDAHERFMTLLE---PW 142
Query: 93 PD---GVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKVVPSERILLET 148
D G ++H + G+ E + G Y +G++ + + +++L ++P+E++L+ET
Sbjct: 143 LDKLPGAVLHCFTGTREEMQACVARGIYIGITGWVCDERRGLELRELLPLIPAEKLLIET 202
Query: 149 DAPDALPK 156
DAP LP+
Sbjct: 203 DAPYLLPR 210
>sp|B7LTZ5|TATD_ESCF3 Tat-linked quality control protein TatD OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=tatD
PE=3 SV=1
Length = 260
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GE GLD + +Q F QL +A EL P +HC A + +++
Sbjct: 88 AIGECGLDFNRNFSTPE--EQERAFVAQLRIAAELNMPVFMHCRDAHERFITLLEPWLEK 145
Query: 93 PDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKVVPSERILLETDAP 151
G ++H + G+ E + G Y +G++ + + +++L ++P+E++L+ETDAP
Sbjct: 146 LPGAVLHCFTGTREEMQACVARGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAP 205
Query: 152 DALPK 156
LP+
Sbjct: 206 YLLPR 210
>sp|Q6GML7|TATD1_DANRE Putative deoxyribonuclease TATDN1 OS=Danio rerio GN=tatdn1 PE=2
SV=1
Length = 298
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 32/216 (14%)
Query: 31 AAAVGEIGLDKGSKGREIDFM---DQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMK 87
AVGE GLD ++F Q+ F+ Q +LA+ P +HC A + ++IM+
Sbjct: 107 VVAVGECGLDFD----RLEFCPKETQLRYFQLQFDLAEASGLPMFLHCRNAHTEFIDIMR 162
Query: 88 SVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLE 147
G ++HS+ GS + L L Y +G S+K + +++K +PS+R+++E
Sbjct: 163 RNRQRCVGGVVHSFDGSQQDAAALLDLDLYIGING--CSLKTAENLEVMKSIPSDRLMIE 220
Query: 148 TDAPDALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKETL 207
TDAP K L+ S P + K E H KD
Sbjct: 221 TDAPWCGIKNTHAGAKLI--KTSFPTK--KKWETG-----------HCVKDR-------- 257
Query: 208 NHPANIHNVLDYVASLLDMTKEELAELSYRNAIRLF 243
N P +I VL+ +A++ + +LAE + N LF
Sbjct: 258 NEPCHIIQVLEVMAAVREEDPLDLAETIFNNTDTLF 293
>sp|Q3U1C6|TATD3_MOUSE Putative deoxyribonuclease TATDN3 OS=Mus musculus GN=Tatdn3 PE=2
SV=1
Length = 294
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 53/213 (24%)
Query: 33 AVGEIGLDKGSK--GREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVG 90
A+GE+GLD + G + + +Q V +Q++LAK L P ++H A + +++ G
Sbjct: 101 AIGEVGLDFTPRYAGTDEEKEEQRQVLIRQVQLAKRLNVPLNVHSRSAGRPTISLLREQG 160
Query: 91 PFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLETDA 150
+ V++H++ G + E + G YFS ++ ++ + +K++K +P I LETD+
Sbjct: 161 A--EQVLLHAFDGRPSVAMEGVRAGYYFSIPPSIV--RSGQKQKLVKQLPLSSICLETDS 216
Query: 151 PDALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKETLNHP 210
P P+ K T N P
Sbjct: 217 PALGPE-----------------------------------------------KLTRNEP 229
Query: 211 ANIHNVLDYVASLLDMTKEELAELSYRNAIRLF 243
NI +++A + ++ EE+ E++ RNA RLF
Sbjct: 230 CNISIAAEFIAQVKGISVEEVREVTTRNAFRLF 262
>sp|P27859|TATD_ECOLI Tat-linked quality control protein TatD OS=Escherichia coli (strain
K12) GN=tatD PE=1 SV=3
Length = 260
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GE GLD + +Q F QL +A +L P +HC A + +++ P+
Sbjct: 88 AIGECGLDFNRNFSTPE--EQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLE---PW 142
Query: 93 PD---GVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKVVPSERILLET 148
D G ++H + G+ E + G Y +G++ + + +++L ++P+E++L+ET
Sbjct: 143 LDKLPGAVLHCFTGTREEMQACVAHGIYIGITGWVCDERRGLELRELLPLIPAEKLLIET 202
Query: 149 DAPDALPK 156
DAP LP+
Sbjct: 203 DAPYLLPR 210
>sp|E3G381|TATD_ENTCS Tat-linked quality control protein TatD OS=Enterobacter cloacae
(strain SCF1) GN=tatD PE=3 SV=1
Length = 260
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 9 RFVQERTPNWFSTLKEFFEITPAAAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELK 68
R+ +E T TL + E+ A+GE GLD Q F QL LA E
Sbjct: 68 RWTRE-TEQRIRTLAQAPEVV---AIGECGLDFNRNFSTPQ--AQEAAFSAQLALAAECG 121
Query: 69 RPASIHCVRAFGDLLEIMKSVGPFPD---GVIIHSYLGSAEMVPELSKLGAYFSFSGFLM 125
P +HC A + ++ P+ D G ++H + G+ + + + + G Y +G++
Sbjct: 122 MPVFLHCRDAHERFMALLT---PWLDKLPGAVLHCFTGTRDELQDCLRHGLYIGITGWVC 178
Query: 126 SMKAQKA-KKMLKVVPSERILLETDAPDALPK 156
+ A + ML ++P+ R+++ETDAP LP+
Sbjct: 179 DERRGLALRDMLPLIPANRLMVETDAPYLLPR 210
>sp|P39408|YJJV_ECOLI Uncharacterized deoxyribonuclease YjjV OS=Escherichia coli (strain
K12) GN=yjjV PE=1 SV=2
Length = 259
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 22 LKEFFEITPA--AAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAF 79
L++ E PA AVGEIGLD G + F Q + +QL+LAK P +H R
Sbjct: 81 LQQALERRPAKVVAVGEIGLD--LFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTH 138
Query: 80 GDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVV 139
D L + P ++H + GS + +LG G + +A K + ++ +
Sbjct: 139 -DKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKL 197
Query: 140 PSERILLETDAPDALPKAELNSLFLVDGDPSLPQE 174
P +LLETDAPD +P LN G P+ P++
Sbjct: 198 PLASLLLETDAPD-MP---LNGF---QGQPNRPEQ 225
>sp|B5XYH5|TATD_KLEP3 Tat-linked quality control protein TatD OS=Klebsiella pneumoniae
(strain 342) GN=tatD PE=3 SV=1
Length = 263
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GE GLD +Q F QL LA EL P +HC A L ++K
Sbjct: 88 AIGECGLDFNRNFSTPQ--EQEAAFSAQLALAAELAMPVFLHCRDAHDRFLALLKPWLEK 145
Query: 93 PDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKVVPSERILLETDAP 151
G ++H + GS V E LG + +G++ + + +++L +P+ER+LLETDAP
Sbjct: 146 IPGAVLHCFTGSRSEVQECLDLGLFIGITGWVCDERRGLELRELLPAIPAERLLLETDAP 205
Query: 152 DALPK 156
LP+
Sbjct: 206 YLLPR 210
>sp|B7XJI2|TATD1_ENTBH Putative deoxyribonuclease TATDN1 homolog OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_25826 PE=3 SV=1
Length = 274
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GE GLD +I+ Q +F+ QLEL+ L P +H AF D I+K+
Sbjct: 102 AIGECGLDYYRNQLKIE---QQRIFKMQLELSY-LNIPYFLHMRNAFDDFYNIIKNYTNV 157
Query: 93 PDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLETDAPD 152
+IHS+ G+ + L LG Y +G S+K ++K +P ++IL+ETD+P
Sbjct: 158 TG--VIHSFDGTVDQALALINLGFYIGING--CSLKNNI--DLVKNIPIDKILVETDSPF 211
Query: 153 ALPK 156
L +
Sbjct: 212 CLIR 215
>sp|C9XTA5|TATD_CROTZ Tat-linked quality control protein TatD OS=Cronobacter turicensis
(strain DSM 18703 / LMG 23827 / z3032) GN=tatD PE=3 SV=2
Length = 263
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GE GLD +Q F +QL LA L P +HC A L ++ P+
Sbjct: 88 AIGECGLDFNRNFSTP--AEQEHAFTEQLRLAAALALPVFLHCRDAHARFLALLD---PW 142
Query: 93 PD---GVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKVVPSERILLET 148
D G ++H + G+ + E G Y +G++ + + + +L ++P++R+LLET
Sbjct: 143 LDKLPGAVLHCFTGTEQEARECLARGMYLGITGWVCDERRGLELRALLPIIPADRLLLET 202
Query: 149 DAPDALPK 156
DAP LP+
Sbjct: 203 DAPYLLPR 210
>sp|A1A4M4|TATD3_BOVIN Putative deoxyribonuclease TATDN3 OS=Bos taurus GN=TATDN3 PE=2 SV=1
Length = 273
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 54/213 (25%)
Query: 33 AVGEIGLDKGSK--GREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVG 90
A+GE+GLD + G + +Q V +Q++LAK L P ++H A + ++ G
Sbjct: 104 AIGEVGLDFSPRFAGTDEQKEEQRQVLIRQVQLAKRLNLPLNVHSRSAGRPTISLLNEQG 163
Query: 91 PFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLETDA 150
D V++H++ G + E K G +FS ++ Q K++K +P I LETD+
Sbjct: 164 A--DKVLLHAFDGRPSVAMEGVKAGYFFSIPPSIIRSGQQ---KLVKQLPLTSICLETDS 218
Query: 151 PDALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKETLNHP 210
P P+ K+ N P
Sbjct: 219 PALGPE-----------------------------------------------KQVRNEP 231
Query: 211 ANIHNVLDYVASLLDMTKEELAELSYRNAIRLF 243
NI +Y+A + ++ EE+ E++ +NA++LF
Sbjct: 232 RNISISAEYIAQVKGVSVEEVIEVTTQNALKLF 264
>sp|B1JP69|TATD_YERPY Tat-linked quality control protein TatD OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=tatD
PE=3 SV=1
Length = 260
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 26/173 (15%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGV-FRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGP 91
A+GE GLD R Q V F QL LA EL P +HC A ++++ P
Sbjct: 89 AIGECGLDFN---RNFSTPAQQEVAFTAQLALAAELSLPVFLHCRDAHERFIDLLV---P 142
Query: 92 FPDGV---IIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKVVPSERILLE 147
+ D + ++H + G+++ + LG +G++ + + +L +P +++LLE
Sbjct: 143 WLDKIPAAVVHCFTGNSDELDACLALGLSIGITGWVCDERRGLDLRALLPRIPVQQLLLE 202
Query: 148 TDAPDALPKAELN---------SLFLVDGDPSLPQELSAKEEHSPN-VGSASD 190
TDAP LP+ +LN FL P + Q+++A + PN +G +D
Sbjct: 203 TDAPYLLPR-DLNPKPASRRNEPCFL----PHIVQQVAAWRQEDPNWLGQKTD 250
>sp|Q8SW70|TATD1_ENCCU Putative deoxyribonuclease TATDN1 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU03_0200 PE=3 SV=1
Length = 273
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 16 PNWFSTLKEFFEITP------AAAVGEIGLDKGSKGREIDFMDQVG---VFRQQLELAKE 66
P S EI P A+GE GLD ++F D+V +FR QL+L
Sbjct: 65 PTSSSRYSNIDEIVPLVNDETVVAIGECGLDYD----RLEFADKVSQKRIFRSQLDLGGS 120
Query: 67 LKRPASIHCVRAFGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS 126
S C R F M+ V + ++HS+ GS E EL K G + +G S
Sbjct: 121 CYFFHSRSCHRDF------MEIVSDYRIRGVVHSFTGSIEEARELIKKGLFIGING--CS 172
Query: 127 MKAQKAKKMLKVVPSERILLETDAPDALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVG 186
+K + ++++ +P E +L+ETD+P + V D S + L K E V
Sbjct: 173 VKTLEGIEIVRSLPLESLLIETDSPYCKIRRSYAGFEYVTTDFSQQKALKKKNEPCCVVQ 232
Query: 187 SASDNQFHASKDSSTLPKETLNHPANIH 214
A KD + + L++ ++
Sbjct: 233 MAEVVSNATGKDYDLVVETILDNTIGLY 260
>sp|Q17R31|TATD3_HUMAN Putative deoxyribonuclease TATDN3 OS=Homo sapiens GN=TATDN3 PE=1
SV=1
Length = 274
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 53/213 (24%)
Query: 33 AVGEIGLDKGSK--GREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVG 90
A+GE+GLD + G +Q V +Q++LAK L P ++H A + +++ G
Sbjct: 104 AIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQG 163
Query: 91 PFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVPSERILLETDA 150
+ V++H++ G + E + G +FS ++ ++ + +K++K +P I LETD+
Sbjct: 164 A--EKVLLHAFDGRPSVAMEGVRAGYFFSIPPSII--RSGQKQKLVKQLPLTSICLETDS 219
Query: 151 PDALPKAELNSLFLVDGDPSLPQELSAKEEHSPNVGSASDNQFHASKDSSTLPKETLNHP 210
P P+ K+ N P
Sbjct: 220 PALGPE-----------------------------------------------KQVRNEP 232
Query: 211 ANIHNVLDYVASLLDMTKEELAELSYRNAIRLF 243
NI +Y+A + ++ EE+ E++ +NA++LF
Sbjct: 233 WNISISAEYIAQVKGISVEEVIEVTTQNALKLF 265
>sp|D0KC77|TATD_PECWW Tat-linked quality control protein TatD OS=Pectobacterium wasabiae
(strain WPP163) GN=tatD PE=3 SV=1
Length = 260
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKS-VGP 91
A+GE GLD + +Q F QL +A EL P +HC A + ++ +G
Sbjct: 89 AIGECGLDFNRNFSTPE--EQERAFSAQLAIAAELSMPVFLHCRDAHPRFISLLTPWLGQ 146
Query: 92 FPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMS-MKAQKAKKMLKVVPSERILLETDA 150
P ++H + G+ + + +G +G++ + + + +L +P++R+L+ETDA
Sbjct: 147 LP-AAVVHCFTGNRQELDACLAVGLTIGITGWVCDERRGLELRALLPHIPADRLLVETDA 205
Query: 151 PDALPK 156
P LP+
Sbjct: 206 PYLLPR 211
>sp|C6C4V4|TATD_DICDC Tat-linked quality control protein TatD OS=Dickeya dadantii (strain
Ech703) GN=tatD PE=3 SV=1
Length = 264
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GE GLD +Q F QL +A +L P +HC A + +++
Sbjct: 89 AIGECGLDFNRNFSTPS--EQERAFSAQLAIAADLGMPVFMHCREAHSRFMMLLRPWLEK 146
Query: 93 PDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKA-KKMLKVVPSERILLETDAP 151
++H + G+ + + E + G +G++ + A + +L+ +P +R+LLETDAP
Sbjct: 147 LPAAVLHCFTGTRDELDECLQAGLSIGITGWVCDERRGLALRALLEYIPDDRLLLETDAP 206
Query: 152 DALPK 156
LP+
Sbjct: 207 YLLPR 211
>sp|E0SLH6|TATD_DICD3 Tat-linked quality control protein TatD OS=Dickeya dadantii (strain
3937) GN=tatD PE=3 SV=1
Length = 264
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 33 AVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPF 92
A+GE GLD +Q F QL +A E P +HC A + ++ P+
Sbjct: 89 AIGECGLDFNRNFSTPQEQEQA--FSAQLAIAAERAMPVFLHCRDAHARFMALLT---PW 143
Query: 93 PD---GVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKA-KKMLKVVPSERILLET 148
D ++H + GS + + + + G +G++ + A + +L +P +R+LLET
Sbjct: 144 LDKLPAAVLHCFTGSGDELDDSLRAGLMIGITGWVCDERRGLALRALLPRIPDDRLLLET 203
Query: 149 DAPDALPK 156
DAP LP+
Sbjct: 204 DAPYLLPR 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,098,702
Number of Sequences: 539616
Number of extensions: 3935614
Number of successful extensions: 11261
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 11114
Number of HSP's gapped (non-prelim): 124
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)