Query 025334
Match_columns 254
No_of_seqs 113 out of 1250
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 08:14:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025334.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025334hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2iq1_A Protein phosphatase 2C 100.0 5.1E-49 1.7E-53 327.9 27.6 248 3-254 6-262 (274)
2 2p8e_A PPM1B beta isoform vari 100.0 1E-48 3.5E-53 330.9 27.0 246 3-254 22-298 (307)
3 3qn1_B Protein phosphatase 2C 100.0 3E-48 1E-52 331.8 24.8 247 5-254 14-328 (337)
4 4da1_A Protein phosphatase 1K, 100.0 6.5E-48 2.2E-52 335.5 26.9 247 4-254 121-376 (389)
5 3kdj_B Protein phosphatase 2C 100.0 2.2E-48 7.5E-53 330.2 22.7 248 1-254 5-305 (316)
6 2i0o_A Ser/Thr phosphatase; be 100.0 8.7E-48 3E-52 324.9 25.8 245 3-254 21-304 (304)
7 1a6q_A Phosphatase 2C; catalyt 100.0 3.5E-47 1.2E-51 329.4 26.3 246 3-254 20-292 (382)
8 2isn_A NYSGXRC-8828Z, phosphat 100.0 3.8E-46 1.3E-50 321.2 27.9 243 4-254 12-333 (364)
9 2i44_A Serine-threonine phosph 100.0 4.6E-46 1.6E-50 317.1 24.9 247 4-254 21-321 (324)
10 2pk0_A Serine/threonine protei 100.0 1.9E-45 6.3E-50 302.5 22.5 239 1-254 2-246 (250)
11 3d8k_A PP2C, protein phosphata 100.0 1.5E-45 5E-50 318.6 21.4 241 4-254 12-324 (377)
12 2irm_A Mitogen-activated prote 100.0 2E-45 6.9E-50 316.8 19.9 236 10-254 25-356 (358)
13 1txo_A Putative bacterial enzy 100.0 1.3E-44 4.5E-49 295.2 23.4 232 1-254 1-236 (237)
14 2j4o_A Mitogen-activated prote 100.0 1.6E-45 5.6E-50 321.2 17.3 247 3-254 25-366 (401)
15 2j82_A TPPHA, protein serine-t 100.0 7.4E-44 2.5E-48 291.2 22.1 231 5-253 1-240 (240)
16 2jfr_A Ser-Thr phosphatase MSP 100.0 1.7E-43 5.7E-48 288.1 21.7 227 1-253 2-233 (234)
17 2pnq_A [pyruvate dehydrogenase 100.0 5E-43 1.7E-47 309.9 21.0 247 6-254 38-455 (467)
18 3rnr_A Stage II sporulation E 100.0 3.4E-39 1.1E-43 258.7 13.0 197 33-253 7-211 (211)
19 3pu9_A Protein serine/threonin 99.9 6.7E-23 2.3E-27 167.1 23.1 204 1-253 7-223 (242)
20 3t91_A Stage II sporulation pr 99.9 1E-23 3.4E-28 172.0 16.6 203 2-253 5-219 (242)
21 3zt9_A Serine phosphatase; hyd 99.9 7.2E-20 2.5E-24 144.1 18.4 189 4-252 3-193 (193)
22 3f79_A Probable two-component 99.8 1.1E-18 3.9E-23 143.2 19.3 202 4-254 37-253 (255)
23 3ke6_A Protein RV1364C/MT1410; 99.4 8.3E-11 2.9E-15 102.3 24.6 198 4-253 35-256 (399)
24 3eq2_A Probable two-component 99.0 1.3E-08 4.3E-13 88.2 17.4 194 5-253 177-391 (394)
25 3out_A Glutamate racemase; str 28.9 40 0.0014 26.9 3.1 51 39-89 10-67 (268)
26 2ww6_A Fibritin, T4 fibritin; 28.3 52 0.0018 16.1 2.2 16 119-134 9-24 (27)
27 3c4z_A Rhodopsin kinase; Ser/T 23.3 42 0.0014 29.8 2.5 74 168-249 43-126 (543)
28 4e9m_A Nucleotide-binding olig 22.9 1.1E+02 0.0039 21.8 4.2 31 210-241 55-85 (144)
29 2nz7_A NOD1, caspase recruitme 22.4 1.3E+02 0.0043 19.9 4.2 31 210-241 41-71 (98)
30 1dgn_A Iceberg (protease inhib 21.9 1.3E+02 0.0045 19.3 4.2 33 209-241 32-64 (89)
31 3ist_A Glutamate racemase; str 21.3 60 0.002 25.9 2.8 53 38-90 7-66 (269)
No 1
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.1e-49 Score=327.90 Aligned_cols=248 Identities=30% Similarity=0.431 Sum_probs=213.2
Q ss_pred CceeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Q 025334 3 KHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCI 82 (254)
Q Consensus 3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~ 82 (254)
..+.+|+.+++|+|. .|||++++.. ..++..+|+|||||||+.+|+++++.+.+.+.+......++...|+++|..
T Consensus 6 ~~~~~g~~s~~G~R~-~nED~~~~~~---~~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~ 81 (274)
T 2iq1_A 6 SLENVGCASQIGKRK-ENEDRFDFAQ---LTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLE 81 (274)
T ss_dssp CGGGCEEEEECCSSS-SCCEEEEEEE---CSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred cCCeEEEEecccCCC-CccceEEEee---CCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 456789999999976 9999997642 235689999999999999999999999888876544456788999999999
Q ss_pred HHHHHHhhhcc----cCCCCccEEEEEEEeC-CEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCc--hHHHHHhcCCeEec
Q 025334 83 TDTTILEKAVD----LGKGGSTAVTAILINC-EKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREHIEGRGGFVSN 155 (254)
Q Consensus 83 ~~~~l~~~~~~----~~~~~~tt~~~~~~~~-~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~--e~~r~~~~g~~~~~ 155 (254)
+++.+.+.... ....+|||++++++.+ .+++++|+||||+|++|++++.+||.||++.+ |+.|+++.||.+..
T Consensus 82 ~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~Ri~~~gG~v~~ 161 (274)
T 2iq1_A 82 IDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAW 161 (274)
T ss_dssp HHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHHHHHHHcCCEEEc
Confidence 99999876532 2346789998888875 69999999999999999999999999999985 89999998888876
Q ss_pred CCCCCCccCCccccccccCCccccCC-cCCCCeEEEEEcCCC-CeEEEEEcCCCcccCCHHHHHHHHHcccCHHHHHHHH
Q 025334 156 FPGDVPRVDGQLAVARAFGDKSLKMH-LSSEPHVVMETIDDD-TEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHL 233 (254)
Q Consensus 156 ~~~~~~~~~~~~~~tr~~G~~~~~~~-~~~~p~~~~~~l~~~-~~~liL~SDG~~~~l~~~~i~~~~~~~~~~~~~a~~l 233 (254)
.....++.++.+.+||++|+..+|+. +.++|++..+++.+. +++|||||||||++++++++.+++....+|+++|+.|
T Consensus 162 ~~~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~~~~~~~~a~~L 241 (274)
T 2iq1_A 162 NSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAV 241 (274)
T ss_dssp CTTSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHTSSSHHHHHHHH
T ss_pred CCCCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHHcCCHHHHHHHH
Confidence 54333455678899999999988874 778999999999973 3699999999999999999999999888999999999
Q ss_pred HHHHHhCCCCCCcEEEEEEeC
Q 025334 234 TEEALARNSSDDISCVVVKFN 254 (254)
Q Consensus 234 ~~~a~~~~~~Dn~Tvivv~~~ 254 (254)
++.|+++++.||+||||+++.
T Consensus 242 ~~~A~~~g~~DNiTvivv~~~ 262 (274)
T 2iq1_A 242 TEQAIQYGTEDNSTAVVVPFG 262 (274)
T ss_dssp HHHHHHTTCCSCEEEEEEECT
T ss_pred HHHHHHcCCCCCeEEEEEEcc
Confidence 999999999999999999874
No 2
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=1e-48 Score=330.94 Aligned_cols=246 Identities=30% Similarity=0.492 Sum_probs=209.7
Q ss_pred CceeEEEeeecCCCCCCCCCceEeeeeccC-CCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCCC------------
Q 025334 3 KHVTHGYHLVKGKAGHPMEDYVVAQFKQVD-ENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFW------------ 69 (254)
Q Consensus 3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~-~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~~------------ 69 (254)
+.+.+|+++++|+|. .|||++++...... ..+..+|+|||||||+.+|+++++.+++.+.+...+.
T Consensus 22 ~~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~~ 100 (307)
T 2p8e_A 22 NGLRYGLSSMQGWRV-EMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELS 100 (307)
T ss_dssp TTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------C
T ss_pred CCeeEEEEecCCCCC-cccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhccccccccccc
Confidence 578999999999977 99999986533211 2357899999999999999999999999998643332
Q ss_pred -CCHHHHHHHHHHHHHHHHHhhhcc--cCCCCccEEEEEEEeCCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCc--hHH
Q 025334 70 -QDPESAVRRAYCITDTTILEKAVD--LGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--ERE 144 (254)
Q Consensus 70 -~~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~tt~~~~~~~~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~--e~~ 144 (254)
..+...|+++|..+++.+.+.... ....+|||++++++.+++++++|+||||+|++|++++.+||+||++.+ |..
T Consensus 101 ~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~E~~ 180 (307)
T 2p8e_A 101 VENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKE 180 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHHHHH
Confidence 134778999999999999876432 235689999999999999999999999999999999999999999997 888
Q ss_pred HHHhcCCeEecCCCCCCccCCccccccccCCccccC---------CcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCHHH
Q 025334 145 HIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM---------HLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQD 215 (254)
Q Consensus 145 r~~~~g~~~~~~~~~~~~~~~~~~~tr~~G~~~~~~---------~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~~~ 215 (254)
|+...|+.+.. .+.++.+.+||++|+..+|. .+.++|++..+++.+.+++|||||||||+++++++
T Consensus 181 rI~~~gg~v~~-----~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~e 255 (307)
T 2p8e_A 181 RIQNAGGSVMI-----QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEE 255 (307)
T ss_dssp HHHHTTCCEET-----TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHH
T ss_pred HHHHcCCEEEe-----CcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHH
Confidence 89999988763 36677789999999988773 36789999999999834589999999999999999
Q ss_pred HHHHHHc----ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEeC
Q 025334 216 AADAIKN----IKDARSAARHLTEEALARNSSDDISCVVVKFN 254 (254)
Q Consensus 216 i~~~~~~----~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~~~ 254 (254)
+.+++.. ..+|+.+|+.|++.|+.+++.||+||||+++.
T Consensus 256 i~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~ 298 (307)
T 2p8e_A 256 LCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFS 298 (307)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC-
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECC
Confidence 9999986 46899999999999999999999999999874
No 3
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=3e-48 Score=331.78 Aligned_cols=247 Identities=31% Similarity=0.447 Sum_probs=211.5
Q ss_pred eeEEEeeecCCCCCCCCCceEeeeecc------------------CCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCC
Q 025334 5 VTHGYHLVKGKAGHPMEDYVVAQFKQV------------------DENELGLFAIFDGHLSHEIPDFLRTHLFENILNEP 66 (254)
Q Consensus 5 ~~~~~~s~~G~~~~~neD~~~~~~~~~------------------~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~ 66 (254)
-.||.+|++|+|+ .|||++++..... ...+..+|+|||||||+.++.++++.++..+.+..
T Consensus 14 ~~~G~~s~~G~R~-~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~ 92 (337)
T 3qn1_B 14 PLWGTVSIQGNRS-EMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEI 92 (337)
T ss_dssp CCEEEEEECTTSS-SCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeeeCCc-hhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHH
Confidence 3589999999999 9999998743311 11257899999999999999999999988886521
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHhhhc-------------ccCCCCccEEEEEEEeCCEEEEEEcCC
Q 025334 67 --------------NFWQDPESAVRRAYCITDTTILEKAV-------------DLGKGGSTAVTAILINCEKLVVANVGD 119 (254)
Q Consensus 67 --------------~~~~~~~~~l~~~~~~~~~~l~~~~~-------------~~~~~~~tt~~~~~~~~~~~~~~~vGD 119 (254)
.....+...|+++|..+++.+..... .....+|||++++++.++++|++|+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGD 172 (337)
T 3qn1_B 93 ERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGD 172 (337)
T ss_dssp HHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESS
T ss_pred HhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccC
Confidence 11234678899999999999987641 113468999999999999999999999
Q ss_pred CcEEEEeCCeeeeCCCCCCCCc--hHHHHHhcCCeEecCCCCCCccCCccccccccCCccccCCcCCCCeEEEEEcCCCC
Q 025334 120 SRAVICKNGVAKQLSVDHEPSS--EREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDT 197 (254)
Q Consensus 120 sr~~~~~~~~~~~lt~dh~~~~--e~~r~~~~g~~~~~~~~~~~~~~~~~~~tr~~G~~~~~~~~~~~p~~~~~~l~~~~ 197 (254)
||+|++|++.+.+||.||++.+ |..|+...|+.+..... .+.++.+.+||++|+..+++.+.++|++...++.+.+
T Consensus 173 SR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~--~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~~~~ 250 (337)
T 3qn1_B 173 SRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQG--ARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSRED 250 (337)
T ss_dssp CEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSS--EEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTE
T ss_pred cEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCC--ceecCccccccccccccccCCCCCcceEEEEEeCCCC
Confidence 9999999999999999999997 88899999998875332 4677888999999999999999999999999997669
Q ss_pred eEEEEEcCCCcccCCHHHHHHHHHc---------------------ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEeC
Q 025334 198 EFIILASDGLWKVMSNQDAADAIKN---------------------IKDARSAARHLTEEALARNSSDDISCVVVKFN 254 (254)
Q Consensus 198 ~~liL~SDG~~~~l~~~~i~~~~~~---------------------~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~~~ 254 (254)
++|||||||||++++++++.+++.. ..+++.+|+.|++.|+.+|+.||+|||||+++
T Consensus 251 d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~l~ 328 (337)
T 3qn1_B 251 ECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLK 328 (337)
T ss_dssp EEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECC
T ss_pred CEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEEEEEEEec
Confidence 9999999999999999999999975 34678999999999999999999999999874
No 4
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=6.5e-48 Score=335.47 Aligned_cols=247 Identities=30% Similarity=0.434 Sum_probs=215.8
Q ss_pred ceeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 025334 4 HVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCIT 83 (254)
Q Consensus 4 ~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~ 83 (254)
.+.+|+.+++|+|. .|||++++.. ...+..+|+|||||||+.+++++++.+.+.+.+......++...|+.+|..+
T Consensus 121 ~~~~g~~s~~G~R~-~NED~~~~~~---~~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~~ 196 (389)
T 4da1_A 121 LENVGCASQIGKRK-ENEDRFDFAQ---LTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEI 196 (389)
T ss_dssp GGGCEEEEECTTSS-SCCEEEEEEE---CSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred ceeEEEecCCCCCC-CCcceeeeee---cCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHH
Confidence 35688999999976 9999998632 2466899999999999999999999999988876555667899999999999
Q ss_pred HHHHHhhhccc----CCCCccEEEEEEEeCC-EEEEEEcCCCcEEEEeCCeeeeCCCCCCCCc--hHHHHHhcCCeEecC
Q 025334 84 DTTILEKAVDL----GKGGSTAVTAILINCE-KLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREHIEGRGGFVSNF 156 (254)
Q Consensus 84 ~~~l~~~~~~~----~~~~~tt~~~~~~~~~-~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~--e~~r~~~~g~~~~~~ 156 (254)
++.+....... ...+|||++++++.++ +++++|+||||+|++|++.+.+||.||++.+ |..|+...||.+...
T Consensus 197 n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~ 276 (389)
T 4da1_A 197 DKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWN 276 (389)
T ss_dssp HHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHTCCEECC
T ss_pred HHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcCCeEecc
Confidence 99998765332 2457888888888765 9999999999999999999999999999997 889999999999877
Q ss_pred CCCCCccCCccccccccCCccccCC-cCCCCeEEEEEcCCC-CeEEEEEcCCCcccCCHHHHHHHHHcccCHHHHHHHHH
Q 025334 157 PGDVPRVDGQLAVARAFGDKSLKMH-LSSEPHVVMETIDDD-TEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLT 234 (254)
Q Consensus 157 ~~~~~~~~~~~~~tr~~G~~~~~~~-~~~~p~~~~~~l~~~-~~~liL~SDG~~~~l~~~~i~~~~~~~~~~~~~a~~l~ 234 (254)
....++.++.+.+||++|+..+|+. +.++|++..+++... +++|||||||||++++++++.+++....+|+++|+.|+
T Consensus 277 ~~~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~~~~~~~~a~~Lv 356 (389)
T 4da1_A 277 SLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVT 356 (389)
T ss_dssp ---CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHHHHSSSHHHHHHHHH
T ss_pred cCCCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHhcCCHHHHHHHHH
Confidence 6666788888999999999988874 789999999999863 67999999999999999999999988889999999999
Q ss_pred HHHHhCCCCCCcEEEEEEeC
Q 025334 235 EEALARNSSDDISCVVVKFN 254 (254)
Q Consensus 235 ~~a~~~~~~Dn~Tvivv~~~ 254 (254)
+.|+.+|+.||+||||+++.
T Consensus 357 ~~A~~~g~~DNiTvivv~~~ 376 (389)
T 4da1_A 357 EQAIQYGTEDNSTAVVVPFG 376 (389)
T ss_dssp HHHHHHTCCSCEEEEEEEEC
T ss_pred HHHHHcCCCCCeEEEEEEec
Confidence 99999999999999999874
No 5
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=2.2e-48 Score=330.18 Aligned_cols=248 Identities=31% Similarity=0.483 Sum_probs=205.7
Q ss_pred CCCceeEEEeeecCCCCCCCCCceEeeeecc-------------CCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCC-
Q 025334 1 MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQV-------------DENELGLFAIFDGHLSHEIPDFLRTHLFENILNEP- 66 (254)
Q Consensus 1 m~~~~~~~~~s~~G~~~~~neD~~~~~~~~~-------------~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~- 66 (254)
|..-..||+++++|+|. .|||++++..... ...+..+|+|||||||+.+++++++.+++.+.+..
T Consensus 5 ~~~~~~~g~~s~~G~R~-~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~ 83 (316)
T 3kdj_B 5 FKSVPLYGFTSICGRRP-EMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIA 83 (316)
T ss_dssp -----CEEEEEECTTSS-SCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEEEEeEeCCC-CCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 44567899999999988 9999998642211 12367899999999999999999999998886531
Q ss_pred ---CCC-------CCHHHHHHHHHHHHHHHHHhhhcccCCCCccEEEEEEEeCCEEEEEEcCCCcEEEEeCCeeeeCCCC
Q 025334 67 ---NFW-------QDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVD 136 (254)
Q Consensus 67 ---~~~-------~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~~~~~~~~~~~vGDsr~~~~~~~~~~~lt~d 136 (254)
... ..+...++++|..+++.+.... ...+|||++++++.++++|++|+||||+|++|++++.+||.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~---~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~D 160 (316)
T 3kdj_B 84 KEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVA---PETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVD 160 (316)
T ss_dssp HHCCCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTS---CTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCC
T ss_pred hhhcccccccchHHHHHHHHHHHHHHHHHHHhccc---CCCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCC
Confidence 110 1246677778878877775432 256899999999999999999999999999999999999999
Q ss_pred CCCCc--hHHHHHhcCCeEecCCCCCCccCCccccccccCCccccCCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCHH
Q 025334 137 HEPSS--EREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQ 214 (254)
Q Consensus 137 h~~~~--e~~r~~~~g~~~~~~~~~~~~~~~~~~~tr~~G~~~~~~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~~ 214 (254)
|++.+ |..|+...|+.+..... .+.++.+.+||++|+..+++.+.++|++....+...+++|||||||||++++++
T Consensus 161 H~~~~~~e~~ri~~~~g~v~~~~~--~r~~g~l~~sRalGd~~~~~~~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ 238 (316)
T 3kdj_B 161 HKPDREDEAARIEAAGGKVIQWNG--ARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDE 238 (316)
T ss_dssp CCTTSHHHHHHHHHTTCCEEESSS--EEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHTSSCHH
T ss_pred CCCCCHHHHHHHHHcCCeEEecCC--ceEcceeccccccCccccCCCcCCCCceEEEEecCCCCEEEEEccCcccCCCHH
Confidence 99997 88899999998875332 467788899999999999999999999999995555999999999999999999
Q ss_pred HHHHHHHc---------------------------ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEeC
Q 025334 215 DAADAIKN---------------------------IKDARSAARHLTEEALARNSSDDISCVVVKFN 254 (254)
Q Consensus 215 ~i~~~~~~---------------------------~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~~~ 254 (254)
++.+++.. ..+++.+|+.|++.|+.+|+.||+||||+++.
T Consensus 239 ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~~g~~DNiTvivv~l~ 305 (316)
T 3kdj_B 239 EACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLK 305 (316)
T ss_dssp HHHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECS
T ss_pred HHHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHHHHcCCCCCeEEEEEEcc
Confidence 99999875 23578999999999999999999999999874
No 6
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=8.7e-48 Score=324.90 Aligned_cols=245 Identities=29% Similarity=0.513 Sum_probs=204.1
Q ss_pred CceeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCC-CCCHHHHHHHHHH
Q 025334 3 KHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNF-WQDPESAVRRAYC 81 (254)
Q Consensus 3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~-~~~~~~~l~~~~~ 81 (254)
.++.+|+++++|.|. .|||++++.... ..+..+|+|||||||+.+|+++++.+++.+.+.... ..++.+.|+++|.
T Consensus 21 ~~~~~~~~s~~G~R~-~nED~~~~~~~~--~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~l~~a~~ 97 (304)
T 2i0o_A 21 EFLASGSSSMQGWRI-SQEDAHNCILNF--DDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFL 97 (304)
T ss_dssp SSEEEEEEEEEESSS-CCCEEEEEEEEE--ETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHHHTTCHHHHHHHHHH
T ss_pred CceEEEEeecCCCCC-CccCEEEEEecc--CCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhcccccHHHHHHHHHH
Confidence 578999999999977 999999764321 246789999999999999999999999988764322 2457889999999
Q ss_pred HHHHHHHhhh----------------cccCCCCccEEEEEEEeCCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCc--hH
Q 025334 82 ITDTTILEKA----------------VDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--ER 143 (254)
Q Consensus 82 ~~~~~l~~~~----------------~~~~~~~~tt~~~~~~~~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~--e~ 143 (254)
.+++.+.+.. ......+|||++++++.+++++++|+||||+|++|+|++.+||+||++.+ |.
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~e~ 177 (304)
T 2i0o_A 98 GFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEY 177 (304)
T ss_dssp HHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHH
T ss_pred HHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEcCCCcCCcCHHHH
Confidence 9999886532 11246789999999999999999999999999999999999999999997 88
Q ss_pred HHHHhcCCeEecCCCCCCccCCccccccccCCccccC---------CcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCHH
Q 025334 144 EHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM---------HLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQ 214 (254)
Q Consensus 144 ~r~~~~g~~~~~~~~~~~~~~~~~~~tr~~G~~~~~~---------~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~~ 214 (254)
.|+...|+.+... .+.++.+.+||++|+..+|. .+.++|++..+++.+.+.||||||||||++++++
T Consensus 178 ~rI~~~gg~v~~~----~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ 253 (304)
T 2i0o_A 178 QRIEKAGGRVTLD----GRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSE 253 (304)
T ss_dssp HHHHHTTCCBCTT----SCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHH
T ss_pred HHHHhCCCEEEeC----CeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCCHH
Confidence 8999999887632 35677789999999988764 4578999999999983346899999999999999
Q ss_pred HHHHHHHc-----ccCHHHHHHHHHHHHHh------CCCCCCcEEEEEEeC
Q 025334 215 DAADAIKN-----IKDARSAARHLTEEALA------RNSSDDISCVVVKFN 254 (254)
Q Consensus 215 ~i~~~~~~-----~~~~~~~a~~l~~~a~~------~~~~Dn~Tvivv~~~ 254 (254)
++.+++.. ..+|+.+|+.|++.|++ .+..||+||||++|+
T Consensus 254 ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 254 QVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304 (304)
T ss_dssp HHHHHHHHHHTSTTCCHHHHHHHHHHHHC------------CEEEEEEEEC
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEEeC
Confidence 99999986 46899999999999986 357899999999985
No 7
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=3.5e-47 Score=329.44 Aligned_cols=246 Identities=28% Similarity=0.493 Sum_probs=210.5
Q ss_pred CceeEEEeeecCCCCCCCCCceEeeeeccC-CCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCC--------CCCCHH
Q 025334 3 KHVTHGYHLVKGKAGHPMEDYVVAQFKQVD-ENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPN--------FWQDPE 73 (254)
Q Consensus 3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~-~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~--------~~~~~~ 73 (254)
+.+.||+++++|+|. .|||++++...... ..+..+|+|||||||+.+|.++++.+++.+.+... ....+.
T Consensus 20 ~~l~~g~~s~~G~R~-~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~~~ 98 (382)
T 1a6q_A 20 NGLRYGLSSMQGWRV-EMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVK 98 (382)
T ss_dssp TTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHH
T ss_pred CceEEEEEecCCCCC-CCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCCHHHHH
Confidence 578999999999977 99999986543211 13578999999999999999999999999875311 112357
Q ss_pred HHHHHHHHHHHHHHHhhhc--ccCCCCccEEEEEEEeCCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCc--hHHHHHhc
Q 025334 74 SAVRRAYCITDTTILEKAV--DLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREHIEGR 149 (254)
Q Consensus 74 ~~l~~~~~~~~~~l~~~~~--~~~~~~~tt~~~~~~~~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~--e~~r~~~~ 149 (254)
..|+++|..+++.+..... .....+|||++++++.++++|++|+||||+|++|++.+.+||.||++.+ |..|+...
T Consensus 99 ~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~RI~~~ 178 (382)
T 1a6q_A 99 NGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNA 178 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHHHHHHhc
Confidence 8899999999999987642 2235689999999999999999999999999999999999999999997 88889999
Q ss_pred CCeEecCCCCCCccCCccccccccCCccccC---------CcCCCCeEEEEEcC-CCCeEEEEEcCCCcccCCHHHHHHH
Q 025334 150 GGFVSNFPGDVPRVDGQLAVARAFGDKSLKM---------HLSSEPHVVMETID-DDTEFIILASDGLWKVMSNQDAADA 219 (254)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~tr~~G~~~~~~---------~~~~~p~~~~~~l~-~~~~~liL~SDG~~~~l~~~~i~~~ 219 (254)
|+.+.. .+.++.+.+||++|+..+|. .+.++|++..+++. +.+++|||||||||++++++++.++
T Consensus 179 gg~v~~-----~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~ 253 (382)
T 1a6q_A 179 GGSVMI-----QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDF 253 (382)
T ss_dssp TCCEET-----TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHH
T ss_pred CcEEec-----ccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHHH
Confidence 988774 36677789999999988763 46789999999998 6467999999999999999999999
Q ss_pred HHc----ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEeC
Q 025334 220 IKN----IKDARSAARHLTEEALARNSSDDISCVVVKFN 254 (254)
Q Consensus 220 ~~~----~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~~~ 254 (254)
+.. ..+++.+|+.|++.|+.+++.||+||||+++.
T Consensus 254 v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~ 292 (382)
T 1a6q_A 254 VRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFP 292 (382)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECT
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHhcCCcCCEEEEEEEec
Confidence 986 46899999999999999999999999999874
No 8
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=3.8e-46 Score=321.18 Aligned_cols=243 Identities=28% Similarity=0.406 Sum_probs=201.6
Q ss_pred ceeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 025334 4 HVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCIT 83 (254)
Q Consensus 4 ~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~ 83 (254)
.+.++..+++|+|. .|||++++.......++..+|+|||||||..+|+++++.+...+.+.... ....|+++|..+
T Consensus 12 ~~~~~~~s~~G~R~-~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~~~---~~~~l~~a~~~~ 87 (364)
T 2isn_A 12 YTTTVAATMLGRRP-TDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSEF---TFAEVKKACLSL 87 (364)
T ss_dssp TEEEEEEEECTTSS-SCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCSSC---CHHHHHHHHHHH
T ss_pred ceEEEEEEcCCCCC-cCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhhcc---cHHHHHHHHHHH
Confidence 36889999999977 99999986533223467899999999999999999999999988764332 367899999999
Q ss_pred HHHHHhhhcccCCCCccEEEEEEEeC------------------------------------------------------
Q 025334 84 DTTILEKAVDLGKGGSTAVTAILINC------------------------------------------------------ 109 (254)
Q Consensus 84 ~~~l~~~~~~~~~~~~tt~~~~~~~~------------------------------------------------------ 109 (254)
++.+.+..... ..+|||++++++.+
T Consensus 88 d~~i~~~~~~~-~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (364)
T 2isn_A 88 DAEIIRKLGPK-HVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPDVQQK 166 (364)
T ss_dssp HHHHHHHHCSS-SCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCCCCCEEE
T ss_pred HHHHHHhcccC-CCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhccccccccccccccccccc
Confidence 99997765443 56788888877742
Q ss_pred ------CEEEEEEcCCCcEEEE-eCCeeeeCCCCCCCCc--hHHHHHhcCCeEecCCCCCCccCCccccccccCCccccC
Q 025334 110 ------EKLVVANVGDSRAVIC-KNGVAKQLSVDHEPSS--EREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM 180 (254)
Q Consensus 110 ------~~~~~~~vGDsr~~~~-~~~~~~~lt~dh~~~~--e~~r~~~~g~~~~~~~~~~~~~~~~~~~tr~~G~~~~~~ 180 (254)
.++|++|+||||+|++ ++|++.+||.||++.+ |..|+...||.+... .+++.++.+.+||++|+..+|.
T Consensus 167 ~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~--~~~rv~g~l~ltRalGd~~~k~ 244 (364)
T 2isn_A 167 TIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETF--DVPRVDGVLALSRAFGDSDFKM 244 (364)
T ss_dssp EECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEES--SSEEETTTBSCSBCEECGGGSC
T ss_pred ccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecC--CCcccCCceeeEEEecchhhcc
Confidence 3899999999999999 6899999999999998 778899999888753 4556667778999999988763
Q ss_pred ---------CcCCCCeEEEEEcCCCCeEEEEEcCCCcccCC--HHHHHHHH-----HcccCHHHHHHHHHHHHHhCCCCC
Q 025334 181 ---------HLSSEPHVVMETIDDDTEFIILASDGLWKVMS--NQDAADAI-----KNIKDARSAARHLTEEALARNSSD 244 (254)
Q Consensus 181 ---------~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~--~~~i~~~~-----~~~~~~~~~a~~l~~~a~~~~~~D 244 (254)
.+.++|++..+++.+ +|+|||||||||++++ ++++.+++ ....+++++|+.|++.|+.+++.|
T Consensus 245 ~~~l~~~~~~v~~~Pdv~~~~l~~-~D~llL~SDGl~d~l~~~~~~v~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~D 323 (364)
T 2isn_A 245 NPNLPPEEQKVIAVPDVRQFYALS-SDLLLLACDGVYEPSGMDWAYVRDLTVAEMQRSKGDLEEVAARVMDYAYDMNSQD 323 (364)
T ss_dssp CCSSCGGGSSSBCCCEEEEEEECT-TCEEEEECHHHHCSSSCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCS
T ss_pred ccccCcccCceEEEeEEEEEECCC-CCEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCCCC
Confidence 467899999999998 8899999999999976 66766543 344689999999999999999999
Q ss_pred CcEEEEEEeC
Q 025334 245 DISCVVVKFN 254 (254)
Q Consensus 245 n~Tvivv~~~ 254 (254)
|+||||+++.
T Consensus 324 NiTvivv~~~ 333 (364)
T 2isn_A 324 NISVMLVAFH 333 (364)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEcC
Confidence 9999999874
No 9
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=4.6e-46 Score=317.15 Aligned_cols=247 Identities=22% Similarity=0.353 Sum_probs=200.6
Q ss_pred ceeEEEeeecCCCCCCCCCceEeeeecc-CCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCC--------------
Q 025334 4 HVTHGYHLVKGKAGHPMEDYVVAQFKQV-DENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNF-------------- 68 (254)
Q Consensus 4 ~~~~~~~s~~G~~~~~neD~~~~~~~~~-~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~-------------- 68 (254)
.+.+|+.+++|+|+ .|||++++..... ...+..+|+|||||||+.+++++++.+++.+.+.+.+
T Consensus 21 ~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~~ 99 (324)
T 2i44_A 21 AFDAAIFTDIGGRK-HQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPAT 99 (324)
T ss_dssp TEEEEEEEECTTSS-SCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCHH
T ss_pred ceEEEEEECCCCCC-ccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCcc
Confidence 58899999999966 9999998642211 2456789999999999999999999999998764211
Q ss_pred ------CCCHHHHHHHHHHHHHHHHHhhhccc---CCCCccEEEEEEEeCCEEEEEEcCCCcEEEEeC---C-eeeeCCC
Q 025334 69 ------WQDPESAVRRAYCITDTTILEKAVDL---GKGGSTAVTAILINCEKLVVANVGDSRAVICKN---G-VAKQLSV 135 (254)
Q Consensus 69 ------~~~~~~~l~~~~~~~~~~l~~~~~~~---~~~~~tt~~~~~~~~~~~~~~~vGDsr~~~~~~---~-~~~~lt~ 135 (254)
..++...|+++|..+++.+.+..... ...++||++ ++.++++|++|+||||+|++++ + .+.+||.
T Consensus 100 ~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~--~i~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~ 177 (324)
T 2i44_A 100 EVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTA--VLAKGFVAVGHLGDSRIAMGVETPNGLNCEFLTV 177 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEE--EEETTEEEEEEESSCEEEEEEEETTEEEEEESCC
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEE--EEECCeEEEEEccCceEEEEeccCCCceEEECCC
Confidence 12346789999999999998765432 223444444 4789999999999999999997 7 8999999
Q ss_pred CCCCCc--hHHHHHhcCCeEecCCCC---CCccCCccccccccCC----cccc----------CCcCCCCeEEEEEcCCC
Q 025334 136 DHEPSS--EREHIEGRGGFVSNFPGD---VPRVDGQLAVARAFGD----KSLK----------MHLSSEPHVVMETIDDD 196 (254)
Q Consensus 136 dh~~~~--e~~r~~~~g~~~~~~~~~---~~~~~~~~~~tr~~G~----~~~~----------~~~~~~p~~~~~~l~~~ 196 (254)
||++.+ |+.|+...|+.+...... ..+..+.+.++|++|+ ..++ +++.++|++..+++.+
T Consensus 178 DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l~~- 256 (324)
T 2i44_A 178 DHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTP- 256 (324)
T ss_dssp CCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEEECCT-
T ss_pred CCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEEEEEEcCC-
Confidence 999997 899999999998532111 1134567789999999 3332 2467899999999999
Q ss_pred Ce-EEEEEcCCCcccCCHHHHHHHHHcc----cCHHH--HHHHHHHHHHhCCCCCCcEEEEEEeC
Q 025334 197 TE-FIILASDGLWKVMSNQDAADAIKNI----KDARS--AARHLTEEALARNSSDDISCVVVKFN 254 (254)
Q Consensus 197 ~~-~liL~SDG~~~~l~~~~i~~~~~~~----~~~~~--~a~~l~~~a~~~~~~Dn~Tvivv~~~ 254 (254)
+| +|||||||||++++++++.+++... .+|+. +|+.|++.|+.+++.||+||||++++
T Consensus 257 ~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~ 321 (324)
T 2i44_A 257 QHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQSADNITAMTVFFK 321 (324)
T ss_dssp TEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEC
T ss_pred CCeEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCCCCCEEEEEEee
Confidence 66 9999999999999999999999765 58999 99999999999999999999999974
No 10
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=1.9e-45 Score=302.52 Aligned_cols=239 Identities=20% Similarity=0.268 Sum_probs=201.1
Q ss_pred CCCceeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHH-cCC--CC--CCCHHHH
Q 025334 1 MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENIL-NEP--NF--WQDPESA 75 (254)
Q Consensus 1 m~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~-~~~--~~--~~~~~~~ 75 (254)
+.+.|.+++.|++|+.++.|||++++... .++..+|+|||||||+..+.++++.+++.+. +.. .. ...+...
T Consensus 2 ~k~~~~~~~~s~~G~~r~~neD~~~~~~~---~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~ 78 (250)
T 2pk0_A 2 RKKYMEISLLTDIGQRRSNNQDFINQFEN---KAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDW 78 (250)
T ss_dssp CCCCEEEEEEEECCTTCSCCCEEEEEEEC---TTCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHH
T ss_pred CcceEEEEEecCCCCCCCcCCCceEeccC---CCCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHHHH
Confidence 34678999999999955599999986432 2467899999999999999999998888776 311 11 2345778
Q ss_pred HHHHHHHHHHHHHhhhccc-CCCCccEEEEEEEeCCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCchHHHHHhcCCeEe
Q 025334 76 VRRAYCITDTTILEKAVDL-GKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVS 154 (254)
Q Consensus 76 l~~~~~~~~~~l~~~~~~~-~~~~~tt~~~~~~~~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~e~~r~~~~g~~~~ 154 (254)
++++|..+++.+....... ...++||++++++.+++++++|+||||+|++|++++.++|.||++.++ +.+.|.+..
T Consensus 79 l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~---~~~~g~i~~ 155 (250)
T 2pk0_A 79 MLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNE---LVKAGQLTE 155 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBHHHH---HHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCHHHH---HHHcCCCCH
Confidence 9999999999998775433 356899999999999999999999999999999999999999998765 556676555
Q ss_pred cCCCCCCccCCccccccccCCccccCCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCHHHHHHHHHcccCHHHHHHHHH
Q 025334 155 NFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLT 234 (254)
Q Consensus 155 ~~~~~~~~~~~~~~~tr~~G~~~~~~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~~~i~~~~~~~~~~~~~a~~l~ 234 (254)
.+... .++.+.+||++|+.. .++|++..+++.+ +|+|||||||||++++++++.+++.+..+|+++|+.|+
T Consensus 156 ~~~~~---~~~~~~ltralG~~~-----~~~p~~~~~~l~~-gd~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~L~ 226 (250)
T 2pk0_A 156 EEAAS---HPQKNIITQSIGQAN-----PVEPDLGVHLLEE-GDYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLI 226 (250)
T ss_dssp HHHHT---CCSCCCBSCCBSCSS-----CCCCEEEEEECCT-TCEEEEECHHHHTTSCHHHHHHHHTSSSCHHHHHHHHH
T ss_pred HHHHh---CCCcceEEeecCCCC-----CccceEEEEEcCC-CCEEEEECCCCCCCcCHHHHHHHHhcCCCHHHHHHHHH
Confidence 43322 334569999999987 6899999999998 89999999999999999999999988779999999999
Q ss_pred HHHHhCCCCCCcEEEEEEeC
Q 025334 235 EEALARNSSDDISCVVVKFN 254 (254)
Q Consensus 235 ~~a~~~~~~Dn~Tvivv~~~ 254 (254)
+.|..++..||+|+||++++
T Consensus 227 ~~a~~~g~~DniTvivv~~~ 246 (250)
T 2pk0_A 227 TLANHRGGLDNITVALVYVE 246 (250)
T ss_dssp HHHHHTTCCSCEEEEEEEEC
T ss_pred HHHHHcCCCCCeEEEEEEee
Confidence 99999999999999999874
No 11
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-45 Score=318.59 Aligned_cols=241 Identities=22% Similarity=0.281 Sum_probs=201.0
Q ss_pred ceeEEEeeecCCCCCCCC-----CceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCCCCCHHHHHHH
Q 025334 4 HVTHGYHLVKGKAGHPME-----DYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRR 78 (254)
Q Consensus 4 ~~~~~~~s~~G~~~~~ne-----D~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~ 78 (254)
++.+|+++++|+|+ .|| |++++........+..+|+|||||||+.+|+++++.+++.+.+.. ..+.+.|++
T Consensus 12 ~~~~~~~s~~G~R~-~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~---~~~~~al~~ 87 (377)
T 3d8k_A 12 RTVCASATSRNRRP-TSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR---DVNEEEITR 87 (377)
T ss_dssp HHHHHHTTTCEEEE-EECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS---SSSHHHHHH
T ss_pred cEEEEEEEccCCCC-ccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc---ccHHHHHHH
Confidence 46678899999987 665 555443222235678999999999999999999999999997643 335789999
Q ss_pred HHHHHHHHHHhhhcccCCCCccEEEEEEEe--------------------------------------------------
Q 025334 79 AYCITDTTILEKAVDLGKGGSTAVTAILIN-------------------------------------------------- 108 (254)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~tt~~~~~~~-------------------------------------------------- 108 (254)
+|..+++.+..... .+|||++++++.
T Consensus 88 af~~~d~~l~~~~~----~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~~~ 163 (377)
T 3d8k_A 88 QFERMDGDLRAANL----PGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRAAK 163 (377)
T ss_dssp HHHHHHHHHHHHTC----CCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGGTT
T ss_pred HHHHHHHHHHhccc----CCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeeccccccccc
Confidence 99999999987642 467787777764
Q ss_pred -CCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCc--hHHHHHhcCCeEecCCCCCCccCCccccccccCCcccc------
Q 025334 109 -CEKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLK------ 179 (254)
Q Consensus 109 -~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~--e~~r~~~~g~~~~~~~~~~~~~~~~~~~tr~~G~~~~~------ 179 (254)
++++|++|+||||+|++|+|.+.+||.||++.+ |+.|+...|+.+... ....+.++.+.+||++|+..+|
T Consensus 164 ~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~-~g~~rv~G~l~vtRalGd~~~k~~~~~~ 242 (377)
T 3d8k_A 164 GIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTV-NGELLLGGVVPMTRAFGSFDFKKGGQGK 242 (377)
T ss_dssp CEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEEC-SSSEEETTTBSCSBCSSCGGGSCC---C
T ss_pred CCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEec-CCcEEEcCceecceeecChhhhcccccc
Confidence 148999999999999999999999999999998 999999999987632 2223667778999999999887
Q ss_pred ---CCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCHHHHHH-HHHc----ccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 025334 180 ---MHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAAD-AIKN----IKDARSAARHLTEEALARNSSDDISCVVV 251 (254)
Q Consensus 180 ---~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~~~i~~-~~~~----~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv 251 (254)
+.+.++|++..+++.+ +|+|||||||||+.++++++.. ++.. ..+++.+|+.|++.|+++++.||+||||+
T Consensus 243 ~~~~~v~~~Pdv~~~~l~~-~D~llL~SDGl~d~ls~~e~v~~v~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv 321 (377)
T 3d8k_A 243 LQQDLVSAVPDVTTFFAYP-GDDIVAGTAGAFAHFRSHAAIAAAIALYPVSPETVLDAAKAMVVNAKRRKVTKNISTFVR 321 (377)
T ss_dssp CSSCSSBCCCEEEEEEECT-TCEEEEECGGGGCSCSSHHHHHHHHTTSCCCGGGHHHHHHHHHHTTTTSSCCSCCCEEEE
T ss_pred cccCccccCCcEEEEEcCC-CCEEEEEECCcccCCCcHHHHHHHHHHhhccCCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 3577899999999999 8999999999999999999876 4442 46899999999999999999999999999
Q ss_pred EeC
Q 025334 252 KFN 254 (254)
Q Consensus 252 ~~~ 254 (254)
++.
T Consensus 322 ~~~ 324 (377)
T 3d8k_A 322 HLP 324 (377)
T ss_dssp ECC
T ss_pred Eec
Confidence 874
No 12
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=2e-45 Score=316.75 Aligned_cols=236 Identities=21% Similarity=0.306 Sum_probs=198.3
Q ss_pred eeecCCCCC--CCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCC----CCCCCHHHHHHHHHHHH
Q 025334 10 HLVKGKAGH--PMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEP----NFWQDPESAVRRAYCIT 83 (254)
Q Consensus 10 ~s~~G~~~~--~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~----~~~~~~~~~l~~~~~~~ 83 (254)
.+.+|+|+. +|||++++.. ...+..+|+|||||||+.+|+++++.+++.+.+.. ....++.+.|+++|..+
T Consensus 25 ~~~~G~r~~~~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~~~~~~~~~~~l~~a~~~~ 101 (358)
T 2irm_A 25 YKDDGRRCEGYESRDKKCLCI---SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVCNTDEAVKELIRQSFMSV 101 (358)
T ss_dssp ECSSSCEEECSSCCEEEEEEE---CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTTCCSHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCCCCceEEEEE---CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 667999883 5999997642 34678999999999999999999999999987621 12235678899999999
Q ss_pred HHHHHhhhc-------------------------------------ccCCCCccEEEEEEEeCCEEEEEEcCCCcEEEEe
Q 025334 84 DTTILEKAV-------------------------------------DLGKGGSTAVTAILINCEKLVVANVGDSRAVICK 126 (254)
Q Consensus 84 ~~~l~~~~~-------------------------------------~~~~~~~tt~~~~~~~~~~~~~~~vGDsr~~~~~ 126 (254)
++.+.+... .....+|||++++++.++++|++|+||||+|++|
T Consensus 102 d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~l~r 181 (358)
T 2irm_A 102 EKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCK 181 (358)
T ss_dssp HHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEE
T ss_pred HHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCeEEEEE
Confidence 999876321 1224689999999999999999999999999999
Q ss_pred C---C--eeeeCCCCCCCCc--hHHHHHhcCCeEecCCCCCCccCCccccccccCCccccC--------------CcCCC
Q 025334 127 N---G--VAKQLSVDHEPSS--EREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM--------------HLSSE 185 (254)
Q Consensus 127 ~---~--~~~~lt~dh~~~~--e~~r~~~~g~~~~~~~~~~~~~~~~~~~tr~~G~~~~~~--------------~~~~~ 185 (254)
+ | .+.+||.||++.+ |+.|+.+.|+.+... +.++. .+||++|+..+|. .+.++
T Consensus 182 ~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~-----r~~g~-llTRalGd~~~K~~~~~~~~~~~~~~~~v~~~ 255 (358)
T 2irm_A 182 TDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNF-----EGVPL-YSTRCIGNYLGKAGYKDCNFLSSATAEPVIFE 255 (358)
T ss_dssp CCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGGG-----TTCTT-CBSBCEECHHHHTTGGGSSSSTTCSSCSSBCC
T ss_pred ecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEecc-----CcCCE-EcccCCcCHHHhccccccccccccCCCCEecc
Confidence 8 8 9999999999998 899999999988642 33343 4999999987663 67899
Q ss_pred CeEEE-EEcCCCCeEEEEEcCCCcccCC----------HHHHHHHHHcc----cCHHHHHHHHHHHHHh-----------
Q 025334 186 PHVVM-ETIDDDTEFIILASDGLWKVMS----------NQDAADAIKNI----KDARSAARHLTEEALA----------- 239 (254)
Q Consensus 186 p~~~~-~~l~~~~~~liL~SDG~~~~l~----------~~~i~~~~~~~----~~~~~~a~~l~~~a~~----------- 239 (254)
|++.. +++.+.++||||||||||++++ ++++.+++... .+|+.+|+.|++.|+.
T Consensus 256 Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~~~~ 335 (358)
T 2irm_A 256 PEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQAHHDTYMQLVE 335 (358)
T ss_dssp CEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhccccc
Confidence 99995 9999855579999999999999 89999999874 6999999999999976
Q ss_pred ----CC--CCCCcEEEEEEeC
Q 025334 240 ----RN--SSDDISCVVVKFN 254 (254)
Q Consensus 240 ----~~--~~Dn~Tvivv~~~ 254 (254)
+| +.||+||||++|+
T Consensus 336 ~~~~~Gg~~~DNiTvivv~~~ 356 (358)
T 2irm_A 336 EHRSVTFNSRDDVTLLIRNFN 356 (358)
T ss_dssp SSCCCCCCEECCEEEEEEESC
T ss_pred cccccCCCCCCCeEEEEEeCC
Confidence 46 8999999999974
No 13
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=1.3e-44 Score=295.17 Aligned_cols=232 Identities=21% Similarity=0.248 Sum_probs=195.2
Q ss_pred CCCceeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCC--CCCCHHHHHHH
Q 025334 1 MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPN--FWQDPESAVRR 78 (254)
Q Consensus 1 m~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~--~~~~~~~~l~~ 78 (254)
|..+|.++..|++|+.++.|||++++ +..+|+|||||||+.++.++++.+.+.+.+... ...++.+.|++
T Consensus 1 ~~~~~~~~~~s~~G~~r~~nED~~~~--------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~l~~ 72 (237)
T 1txo_A 1 MTLVLRYAARSDRGLVRANNEDSVYA--------GARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAKLDA 72 (237)
T ss_dssp --CEEEEEEEEECCSSCSSCCEEEEE--------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHHHHHHH
T ss_pred CceEEEEEEecCCCCCCCcCCCcccc--------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHH
Confidence 66789999999999855599999974 246999999999999999999999999876432 23467899999
Q ss_pred HHHHHHHHHHhhhccc--CCCCccEEEEEEEeCCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCchHHHHHhcCCeEecC
Q 025334 79 AYCITDTTILEKAVDL--GKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNF 156 (254)
Q Consensus 79 ~~~~~~~~l~~~~~~~--~~~~~tt~~~~~~~~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~e~~r~~~~g~~~~~~ 156 (254)
+|..+++.+.+..... ...+|||++++++.+++++++|+||||+|++|++++.++|.||++.++ +.+.|.+...+
T Consensus 73 a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~~~~---~~~~G~i~~~~ 149 (237)
T 1txo_A 73 AVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQT---LVDEGRITPEE 149 (237)
T ss_dssp HHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHHHH---HHHTTSSCTTG
T ss_pred HHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCHHHH---HHHcCCCCHHH
Confidence 9999999998765332 246899999999999999999999999999999999999999987654 56667655443
Q ss_pred CCCCCccCCccccccccCCccccCCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCHHHHHHHHHcccCHHHHHHHHHHH
Q 025334 157 PGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTEE 236 (254)
Q Consensus 157 ~~~~~~~~~~~~~tr~~G~~~~~~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~~~i~~~~~~~~~~~~~a~~l~~~ 236 (254)
...+ +..+.++|++|+. ..+|++..+++.+ +|.|||||||||++++++++.+++.+ .+|+.+|+.|++.
T Consensus 150 ~~~~---~~~~~~tr~lg~~------~~~p~~~~~~l~~-~d~lvl~SDGl~d~l~~~~i~~~~~~-~~~~~~a~~L~~~ 218 (237)
T 1txo_A 150 AHSH---PQRSLIMRALTGH------EVEPTLTMREARA-GDRYLLCSDGLSDPVSDETILEALQI-PEVAESAHRLIEL 218 (237)
T ss_dssp GGGC---TTTTCBCCCBSSS------CCCCEEEEEECCT-TCEEEEECHHHHTTSCHHHHHHHHTS-SSHHHHHHHHHHH
T ss_pred HhhC---ccccceeeccCCC------CccceEEEEecCC-CCEEEEECCCCCCCCCHHHHHHHHhc-CCHHHHHHHHHHH
Confidence 3322 3345899999964 4799999999998 89999999999999999999999965 5899999999999
Q ss_pred HHhCCCCCCcEEEEEEeC
Q 025334 237 ALARNSSDDISCVVVKFN 254 (254)
Q Consensus 237 a~~~~~~Dn~Tvivv~~~ 254 (254)
|..+++.||+|+||++++
T Consensus 219 a~~~g~~DniTvivv~~~ 236 (237)
T 1txo_A 219 ALRGGGPDNVTVVVADLE 236 (237)
T ss_dssp HHHTTCCSCEEEEEEEEE
T ss_pred HHHcCCCCCeEEEEEEee
Confidence 999999999999999873
No 14
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=1.6e-45 Score=321.23 Aligned_cols=247 Identities=23% Similarity=0.331 Sum_probs=204.5
Q ss_pred CceeEEEeeecCCCCC-------CCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCC----CCCC
Q 025334 3 KHVTHGYHLVKGKAGH-------PMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPN----FWQD 71 (254)
Q Consensus 3 ~~~~~~~~s~~G~~~~-------~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~----~~~~ 71 (254)
..+.+|+++.+|.|.. .|||++++.. ...+..+|||||||||+.+|+++++.++..+.+... ...+
T Consensus 25 ~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~ 101 (401)
T 2j4o_A 25 HLSGVGSASNRSYSADGKGTESHPPEDSWLKFR---SENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEAD 101 (401)
T ss_dssp TTEEEEEECCEEECSSSSCEECCCCCEEEEEEE---ETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCCTTSCHHH
T ss_pred ccCceeEEecccccccccccCCCCCCceEEEec---CCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhhcccchhh
Confidence 3678999999999984 6999998532 246789999999999999999999999998875321 1235
Q ss_pred HHHHHHHHHHHHHHHHHhhhc------------------------------------ccCCCCccEEEEEEEeCCEEEEE
Q 025334 72 PESAVRRAYCITDTTILEKAV------------------------------------DLGKGGSTAVTAILINCEKLVVA 115 (254)
Q Consensus 72 ~~~~l~~~~~~~~~~l~~~~~------------------------------------~~~~~~~tt~~~~~~~~~~~~~~ 115 (254)
+.+.|+++|..+++.+.+... .....+|||++++++.++++|++
T Consensus 102 ~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~l~va 181 (401)
T 2j4o_A 102 VRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVA 181 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEECCEEEEE
Confidence 678899999999888765311 01236899999999999999999
Q ss_pred EcCCCcEEEEeCC----eeeeCCCCCCCCc--hHHHHHhcCCeEecCCCCCCccCCccccccccCCcccc----------
Q 025334 116 NVGDSRAVICKNG----VAKQLSVDHEPSS--EREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLK---------- 179 (254)
Q Consensus 116 ~vGDsr~~~~~~~----~~~~lt~dh~~~~--e~~r~~~~g~~~~~~~~~~~~~~~~~~~tr~~G~~~~~---------- 179 (254)
|+||||+|++|++ .+.+||.||++.+ |+.|+.+.|+.+.... ..+.++.+.+||++|+..+|
T Consensus 182 nvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~--~~r~~g~l~vtRalGd~~~k~~~~~~~~~~ 259 (401)
T 2j4o_A 182 NVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIK--QVGIICGQESTRRIGDYKVKYGYTDIDLLS 259 (401)
T ss_dssp EESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHH--HHCCBTTBCCSBCEECHHHHHSGGGSTTTT
T ss_pred EccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeecc--CccccCCcccccccCCHhhccccccccccc
Confidence 9999999999988 9999999999998 8899999998753211 12556667899999998766
Q ss_pred ----CCcCCCCeEEE-EEcCCCCeEEEEEcCCCcccC--------CHHHHHHHHHc----ccCHHHHHHHHHHHHHh---
Q 025334 180 ----MHLSSEPHVVM-ETIDDDTEFIILASDGLWKVM--------SNQDAADAIKN----IKDARSAARHLTEEALA--- 239 (254)
Q Consensus 180 ----~~~~~~p~~~~-~~l~~~~~~liL~SDG~~~~l--------~~~~i~~~~~~----~~~~~~~a~~l~~~a~~--- 239 (254)
+++.++|++.. +++.+.+++|||||||||+++ +++++.+++.+ ..+++.+|+.|++.|+.
T Consensus 260 ~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~~~ 339 (401)
T 2j4o_A 260 AAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHS 339 (401)
T ss_dssp TCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhh
Confidence 46789999996 999985569999999999999 89999999986 36899999999999875
Q ss_pred ----CCC--------CCCcEEEEEEeC
Q 025334 240 ----RNS--------SDDISCVVVKFN 254 (254)
Q Consensus 240 ----~~~--------~Dn~Tvivv~~~ 254 (254)
+|+ .||+||||++|+
T Consensus 340 ~a~~~G~~~~~~~~~~DNiTvivv~~~ 366 (401)
T 2j4o_A 340 DTFASGGERARFCPRHEDMTLLVRNFG 366 (401)
T ss_dssp HHHHSCSSGGGGCSEECCEEEEEEEEB
T ss_pred hhhhcCCcccccCCCCCCeEEEEEEcC
Confidence 665 899999999874
No 15
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=7.4e-44 Score=291.21 Aligned_cols=231 Identities=17% Similarity=0.205 Sum_probs=181.8
Q ss_pred eeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCC----C-CCCHHHHHHHH
Q 025334 5 VTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPN----F-WQDPESAVRRA 79 (254)
Q Consensus 5 ~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~----~-~~~~~~~l~~~ 79 (254)
|++++.|++|+.++.|||++ +.. ...+. +|+|||||||+..+.++++.+.+.+.+... . ...+...|.++
T Consensus 1 ~~~~~~s~~G~~r~~neD~~-~~~---~~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 75 (240)
T 2j82_A 1 MDVAGLTDCGLIRKSNQDAF-YID---EKHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQA 75 (240)
T ss_dssp CEEEEEEECCSSCSSCCEEE-EEC---TTTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred CeEEEeCCCCCCCCcCCCcc-Eec---CCCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHH
Confidence 57999999999555999999 532 12344 999999999998888888887777654211 1 34678889999
Q ss_pred HHHHHHHHHhhhccc--CCCCccEEEEEEEe--CCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCchHHHHHhcCCeEec
Q 025334 80 YCITDTTILEKAVDL--GKGGSTAVTAILIN--CEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSN 155 (254)
Q Consensus 80 ~~~~~~~l~~~~~~~--~~~~~tt~~~~~~~--~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~e~~r~~~~g~~~~~ 155 (254)
|..+++.+....... ...++||++++++. +++++++|+||||+|++|++++.++|.||++.++ +.+.|++...
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~---~~~~g~i~~~ 152 (240)
T 2j82_A 76 FLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQ---AVQLGSLTIE 152 (240)
T ss_dssp HHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBHHHH---C---------
T ss_pred HHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcHHHH---HHHcCCCCHH
Confidence 999999998875432 34579999999999 8999999999999999999999999999998765 4566666655
Q ss_pred CCCCCCccCCccccccccCCccccCCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCHHHHHHHHHcccCHHHHHHHHHH
Q 025334 156 FPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTE 235 (254)
Q Consensus 156 ~~~~~~~~~~~~~~tr~~G~~~~~~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~~~i~~~~~~~~~~~~~a~~l~~ 235 (254)
+... .++.+.+||++|+.. ..+|++..+++.+ +|+|||||||+|+.++++++.+++. ..+|+++|+.|++
T Consensus 153 ~~~~---~~~~~~ltralG~~~-----~~~p~~~~~~l~~-gd~lll~SDGl~d~l~~~~i~~~l~-~~~~~~~a~~l~~ 222 (240)
T 2j82_A 153 QARQ---HPWRHVLSQCLGRED-----LSQIDIQPIDLEP-GDRLLLCSDGLTEELTDDVISIYLS-EPNVQKAAAALVD 222 (240)
T ss_dssp ----------CCCBSCCBSCTT-----CCCCEEEEEECCT-TCEEEEECHHHHTTSCHHHHHHHHT-CSSHHHHHHHHHH
T ss_pred HHhc---CCCcCeEeecCCCCC-----ceeEEEEEEeeCC-CCEEEEECCCCCCCCCHHHHHHHHc-cCCHHHHHHHHHH
Confidence 4433 344568999999976 6899999999998 8999999999999999999999998 6799999999999
Q ss_pred HHHhCCCCCCcEEEEEEe
Q 025334 236 EALARNSSDDISCVVVKF 253 (254)
Q Consensus 236 ~a~~~~~~Dn~Tvivv~~ 253 (254)
.|..++..||+|+||+++
T Consensus 223 ~a~~~g~~DniTvivv~~ 240 (240)
T 2j82_A 223 AAKTHGGRDNVTVVVISV 240 (240)
T ss_dssp HHHHTTCCSCEEEEEEEC
T ss_pred HHHHcCCCCCeEEEEEeC
Confidence 999999999999999985
No 16
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=1.7e-43 Score=288.12 Aligned_cols=227 Identities=22% Similarity=0.237 Sum_probs=191.1
Q ss_pred CCCceeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCC--hHHHHHHHHHHHHHHcCCCCCCCHHHHHHH
Q 025334 1 MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSH--EIPDFLRTHLFENILNEPNFWQDPESAVRR 78 (254)
Q Consensus 1 m~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~--~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~ 78 (254)
|...+.+++.+++|+.++.|||++++ +..+|+|||||||+ .+|.++.+.+...+.+.+ + ...+.+
T Consensus 2 m~~~~~~~~~s~~G~~r~~neD~~~~--------~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~~----~-~~~l~~ 68 (234)
T 2jfr_A 2 MASVLSAATATDQGPVRENNQDACLA--------DGILYAVADGFGARGHHASATALKTLSAGFAAAP----D-RDGLLE 68 (234)
T ss_dssp CCSEEEEEEEEECCSSCSSCCEEEEE--------ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHSC----S-HHHHHH
T ss_pred CceeEEEEEecCCCCCCCcCCCccee--------CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcCC----c-HHHHHH
Confidence 77789999999999955599999954 35699999999988 666666666666554431 2 788999
Q ss_pred HHHHHHHHHHhhhcccCCCCccEEEEEEEeCCE---EEEEEcCCCcEEEEeCCeeeeCCCCCCCCchHHHHHhcCCeEec
Q 025334 79 AYCITDTTILEKAVDLGKGGSTAVTAILINCEK---LVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSN 155 (254)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~tt~~~~~~~~~~---~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~e~~r~~~~g~~~~~ 155 (254)
++..+|+.+.+........++||++++++.+++ ++++|+||||+|++|++++.++|.||++.++ +.+.|.+...
T Consensus 69 ~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~---~~~~g~i~~~ 145 (234)
T 2jfr_A 69 AVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGE---LVRMGEITRH 145 (234)
T ss_dssp HHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBHHHH---HHHTTSSCHH
T ss_pred HHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCHHHH---HHHcCCCCHH
Confidence 999999999887644322289999999998888 9999999999999999999999999998764 5667766554
Q ss_pred CCCCCCccCCccccccccCCccccCCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCHHHHHHHHHcccCHHHHHHHHHH
Q 025334 156 FPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTE 235 (254)
Q Consensus 156 ~~~~~~~~~~~~~~tr~~G~~~~~~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~~~i~~~~~~~~~~~~~a~~l~~ 235 (254)
+...+ ++.+.+||++|+.. ..+|++..+++.+ +|+|||||||+|+.++++++.+++ +..+|+.+|+.|++
T Consensus 146 ~~~~~---~~~~~~tralG~~~-----~~~~~~~~~~l~~-gd~lll~SDGl~d~~~~~~i~~~~-~~~~~~~~a~~l~~ 215 (234)
T 2jfr_A 146 EARWH---PQRHLLTRALGIGP-----HIGPDVFGIDCGP-GDRLLISSDGLFAAADEALIVDAA-TSPDPQVAVRRLVE 215 (234)
T ss_dssp HHTTC---TTTTCBSCCBSSSS-----CCCCEEEECCCCT-TCEEEEECGGGGTTSCHHHHHHHH-TCSSHHHHHHHHHH
T ss_pred HHhcC---cccceeeecCcCCC-----CceeEEEEEecCC-CCEEEEECCCCccccCHHHHHHHH-ccCCHHHHHHHHHH
Confidence 43333 34568999999976 6899999999998 899999999999999999999999 77799999999999
Q ss_pred HHHhCCCCCCcEEEEEEe
Q 025334 236 EALARNSSDDISCVVVKF 253 (254)
Q Consensus 236 ~a~~~~~~Dn~Tvivv~~ 253 (254)
.|..++..||+|+|++++
T Consensus 216 ~a~~~g~~DniTvivv~~ 233 (234)
T 2jfr_A 216 VANDAGGSDNTTVVVIDL 233 (234)
T ss_dssp HHHHTTCCSCEEEEEEEE
T ss_pred HHHHcCCCCCeEEEEEEe
Confidence 999999999999999987
No 17
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=5e-43 Score=309.88 Aligned_cols=247 Identities=29% Similarity=0.362 Sum_probs=196.4
Q ss_pred eEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcC--------------------
Q 025334 6 THGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNE-------------------- 65 (254)
Q Consensus 6 ~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~-------------------- 65 (254)
..++.+.+|..++.|||++.+.... ..+..+|||||||||+.+|.++++.++..+.+.
T Consensus 38 v~~~~s~~g~~R~~nED~~~v~~~~--~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~ 115 (467)
T 2pnq_A 38 ILGFDSNRLPANAPIEDRRSATTCL--QTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRAL 115 (467)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEES--SSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----C
T ss_pred eEEEEeeccCCCCCCCCceeeeecc--CCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhccccc
Confidence 4566788888887999999764321 235689999999999999999999998877521
Q ss_pred ----------CC-----------------------------CCCCHHHHHHHHHHHHHHHHHhhhcc------------c
Q 025334 66 ----------PN-----------------------------FWQDPESAVRRAYCITDTTILEKAVD------------L 94 (254)
Q Consensus 66 ----------~~-----------------------------~~~~~~~~l~~~~~~~~~~l~~~~~~------------~ 94 (254)
.. ....+...|+++|..+++.+...... .
T Consensus 116 ~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~ 195 (467)
T 2pnq_A 116 LPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLR 195 (467)
T ss_dssp CCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHH
T ss_pred cccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhccccccccccccc
Confidence 00 01157889999999999999765421 1
Q ss_pred CCCCccEEEEEEEeCCEEEEEEcCCCcEEEEe---CC--eeeeCCCCCCCCc--hHHHHHhcCCeEecCC-CCCCccCCc
Q 025334 95 GKGGSTAVTAILINCEKLVVANVGDSRAVICK---NG--VAKQLSVDHEPSS--EREHIEGRGGFVSNFP-GDVPRVDGQ 166 (254)
Q Consensus 95 ~~~~~tt~~~~~~~~~~~~~~~vGDsr~~~~~---~~--~~~~lt~dh~~~~--e~~r~~~~g~~~~~~~-~~~~~~~~~ 166 (254)
...+|||++++++.++++|++|+||||+|+++ +| .+.+||.||++.+ |..||...|+...... ..+++.++.
T Consensus 196 ~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~ 275 (467)
T 2pnq_A 196 VAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGL 275 (467)
T ss_dssp HHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTT
T ss_pred CCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCccccc
Confidence 24589999999999999999999999999998 47 8999999999987 8899999986543211 123467778
Q ss_pred cccccccCCcccc---------------------------------CCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCH
Q 025334 167 LAVARAFGDKSLK---------------------------------MHLSSEPHVVMETIDDDTEFIILASDGLWKVMSN 213 (254)
Q Consensus 167 ~~~tr~~G~~~~~---------------------------------~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~ 213 (254)
+.+||++|+..+| +.+.++|++..+++.+.+.||||||||||+.+++
T Consensus 276 l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~ 355 (467)
T 2pnq_A 276 LMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHR 355 (467)
T ss_dssp BSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCH
T ss_pred cccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCCh
Confidence 8999999998765 2378999999999999555899999999999999
Q ss_pred HHHHHHHHccc------CH------------------------------HHHHHHHHHHHHhCC----------------
Q 025334 214 QDAADAIKNIK------DA------------------------------RSAARHLTEEALARN---------------- 241 (254)
Q Consensus 214 ~~i~~~~~~~~------~~------------------------------~~~a~~l~~~a~~~~---------------- 241 (254)
+++.+++.... +| +.+|..|++.|+..+
T Consensus 356 ~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~~ 435 (467)
T 2pnq_A 356 QDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSL 435 (467)
T ss_dssp HHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC------------------
T ss_pred HHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhhcC
Confidence 99999997642 33 567899999998764
Q ss_pred -------CCCCcEEEEEEeC
Q 025334 242 -------SSDDISCVVVKFN 254 (254)
Q Consensus 242 -------~~Dn~Tvivv~~~ 254 (254)
..||+|||||+|+
T Consensus 436 ~~~~~R~~~DdITViVv~~~ 455 (467)
T 2pnq_A 436 PEELARMYRDDITIIVVQFN 455 (467)
T ss_dssp -------CCSCEEEEEEEEC
T ss_pred CccccccCCCCcEEEEEEeC
Confidence 4899999999985
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00 E-value=3.4e-39 Score=258.65 Aligned_cols=197 Identities=19% Similarity=0.158 Sum_probs=158.0
Q ss_pred CCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHhhhccc--CCCCccEEEEEEEe--
Q 025334 33 ENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTILEKAVDL--GKGGSTAVTAILIN-- 108 (254)
Q Consensus 33 ~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~--~~~~~tt~~~~~~~-- 108 (254)
.++..+|+|||||||+..+..+++.+++.+.+....... +.+++..+|+.+.+..... ...+|||++++++.
T Consensus 7 ~~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~----~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~ 82 (211)
T 3rnr_A 7 GGDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGS----PLDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLR 82 (211)
T ss_dssp ETTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCC----HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETT
T ss_pred CCCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCC----HHHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeC
Confidence 466889999999999998888888888877652221122 3578888888888765332 35689999999999
Q ss_pred CCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCchHHHHHhcCCeEecCCCCCCccCCccccccccCCccccCCcCCCCeE
Q 025334 109 CEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHV 188 (254)
Q Consensus 109 ~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~e~~r~~~~g~~~~~~~~~~~~~~~~~~~tr~~G~~~~~~~~~~~p~~ 188 (254)
+++++++|+||||+|++|++++.++|.||++.++ +.+.|. .. . ..+.++.+||++|... ..+|++
T Consensus 83 ~~~~~~anvGDSr~yl~r~g~~~~lt~dh~~~~~---~~~~g~-~~---~---~~~~~~~ltralG~~~-----~~~~~~ 147 (211)
T 3rnr_A 83 DGTLEWASVGDCRVYLFKGGRLSRLSLDHNVSSE---MVLLGR-GP---V---PGPAGEMITSFIGIEN-----LTEIST 147 (211)
T ss_dssp TTEEEEEEESSCEEEEEETTEEEECCCCCBHHHH---HHHTTS-CC---C---CSHHHHCBSCCBTCSS-----CCCCEE
T ss_pred CCEEEEEEEccCeEEEEeCCEEEEECCCcHHHHH---HHHcCC-Ch---h---hCCCccEEecccCCCC-----CcceeE
Confidence 9999999999999999999999999999998766 556665 22 2 3334458999999877 678999
Q ss_pred --EEEEcCCCCeEEEEEcCCCcccCCHHHHHHHHHcccCHHHHHHHHHHHHHhCC--CCCCcEEEEEEe
Q 025334 189 --VMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTEEALARN--SSDDISCVVVKF 253 (254)
Q Consensus 189 --~~~~l~~~~~~liL~SDG~~~~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~--~~Dn~Tvivv~~ 253 (254)
..+++.+ +|+|||||||+|+.++++++.+++.+..+ |+.|++.|.+++ ..||+|+||+++
T Consensus 148 ~~~~~~l~~-gd~llL~SDGl~d~~~~~~i~~~l~~~~~----a~~L~~~a~~~g~~~~DNiTvivv~L 211 (211)
T 3rnr_A 148 SEAPLPLEA-GEGVLVVSDGVYRSLHEDRIAMALSRGSD----ARGILQEVEAQGRPYQDNATLALVIL 211 (211)
T ss_dssp CSSCEECCT-TCEEEEEEC-----CCTTEEEEEECTTSC----HHHHHHHHHHSCTTSCSSCEEEEEEC
T ss_pred ecceecCCC-CCEEEEEcCCCCCCcCHHHHHHHHhcCCh----HHHHHHHHHHcCCCCCCceEEEEEeC
Confidence 7889998 89999999999999999999988866544 999999999999 999999999986
No 19
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.92 E-value=6.7e-23 Score=167.15 Aligned_cols=204 Identities=17% Similarity=0.099 Sum_probs=154.0
Q ss_pred CCCceeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHH
Q 025334 1 MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAY 80 (254)
Q Consensus 1 m~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~ 80 (254)
|...+.+++.+........+.|.+.+.. ..++..+++|+||+|++..|..++..+...+.+......+ +.+++
T Consensus 7 m~~~~~~~~~~~~~~~~~vgGD~y~~~~---~~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~~----~~~~l 79 (242)
T 3pu9_A 7 MPVTIELAVAKTHKFGTRESGDTVELVE---RPGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGVR----DGAAA 79 (242)
T ss_dssp CCEEEEEEEEEECCTTCSSCSEEEEEEE---CTTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCC----HHHHH
T ss_pred CCcEEEEEEEecccCccccCCceEEEEE---eCCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHH
Confidence 6678889999988877778999996531 2345677999999999988887777655544331111112 45677
Q ss_pred HHHHHHHHhhhcccCCCCccEEEEEEEe--CCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCchHHHHHhcCCeEecCCC
Q 025334 81 CITDTTILEKAVDLGKGGSTAVTAILIN--CEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPG 158 (254)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~tt~~~~~~~--~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~e~~r~~~~g~~~~~~~~ 158 (254)
..+|+.+..... ....+|+++++++ .++++++|+||+++|+++++.+.+++.++.+
T Consensus 80 ~~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~------------------- 137 (242)
T 3pu9_A 80 RAAHDFLYAMRD---GKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGGR------------------- 137 (242)
T ss_dssp HHHHHHHHHHTT---TCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCCC-------------------
T ss_pred HHHHHHHHhccC---CCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCcc-------------------
Confidence 778888865542 3456888888885 6799999999999999999999999887742
Q ss_pred CCCccCCccccccccCCccccCCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCC-------HHHHHHHHH-cccCHHHHH
Q 025334 159 DVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMS-------NQDAADAIK-NIKDARSAA 230 (254)
Q Consensus 159 ~~~~~~~~~~~tr~~G~~~~~~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~-------~~~i~~~~~-~~~~~~~~a 230 (254)
+|... ..+++...+++.+ ||.|+|||||+++..+ .+++..++. ...+|++++
T Consensus 138 --------------lG~~~-----~~~~~~~~~~l~~-Gd~lll~TDGl~e~~~~~~~~~g~~~l~~l~~~~~~~~~~~~ 197 (242)
T 3pu9_A 138 --------------IGIYR-----HTRPRVLEFPAEP-GLTVILVSDGIIGAGGRRGQPLEFLATGGRVAGPETPAQAIA 197 (242)
T ss_dssp --------------BSSCT-----TCCCEEEEEECCT-TCEEEEECHHHHTTTTTTTCCCCHHHHHHHHCCTTCCHHHHH
T ss_pred --------------ccccC-----CCCceEEEEEeCC-CCEEEEECcCcccCCCCccccccHHHHHHHHhccCCCHHHHH
Confidence 33322 4567788888888 9999999999998654 477766554 235899999
Q ss_pred HHHHHHHHhCC---CCCCcEEEEEEe
Q 025334 231 RHLTEEALARN---SSDDISCVVVKF 253 (254)
Q Consensus 231 ~~l~~~a~~~~---~~Dn~Tvivv~~ 253 (254)
+.|++.+...+ ..||+|++++++
T Consensus 198 ~~l~~~~~~~~~~~~~DDiTvlvv~~ 223 (242)
T 3pu9_A 198 DELLEAALVADDGRAGDDMTVVVLRL 223 (242)
T ss_dssp HHHHHHHHHHTTTSCSSCEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCCCCeEEEEEEE
Confidence 99999998754 679999999986
No 20
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.91 E-value=1e-23 Score=172.05 Aligned_cols=203 Identities=17% Similarity=0.151 Sum_probs=139.9
Q ss_pred CCceeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHH
Q 025334 2 KKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYC 81 (254)
Q Consensus 2 ~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~ 81 (254)
...+.+++++........+.|.+.+... .++..+++|+||+|++..|.+++..+...+.+......+ +.+++.
T Consensus 5 ~~~i~~~~~~~~~p~~~v~GD~y~~~~~---~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~~~----~~~~l~ 77 (242)
T 3t91_A 5 SYRVSTGAAHAAKGGGLVSGDSYSMMEL---GARKYAAAISDGMGNGARAHFESNETIKLLEKILESGID----EKIAIK 77 (242)
T ss_dssp CCEEEEEEEEECTTSCSCCSCEEEEEEE---TTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHTCC----HHHHHH
T ss_pred eEEEEEEeehhcCCccccCCcEEEEEEe---CCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhCCC----HHHHHH
Confidence 3578889988877777789999975321 345678999999997754444433333333221000112 456667
Q ss_pred HHHHHHHhhhcccCCCCccEEEEEEEe--CCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCchHHHHHhcCCeEecCCCC
Q 025334 82 ITDTTILEKAVDLGKGGSTAVTAILIN--CEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGD 159 (254)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~tt~~~~~~~--~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~e~~r~~~~g~~~~~~~~~ 159 (254)
.+|+.+..... ....+|+++++++ +++++++|+||+++|++|++.+.+++.++.
T Consensus 78 ~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~--------------------- 133 (242)
T 3t91_A 78 TINSILSLRTT---DEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNL--------------------- 133 (242)
T ss_dssp HHHHHHTTC-------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC-----------------------
T ss_pred HHHHHHHhcCC---CCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCCCc---------------------
Confidence 77877765432 3466777777776 789999999999999999999988865543
Q ss_pred CCccCCccccccccCCccccCCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCC-----HHHHHHHHHc--ccCHHHHHHH
Q 025334 160 VPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMS-----NQDAADAIKN--IKDARSAARH 232 (254)
Q Consensus 160 ~~~~~~~~~~tr~~G~~~~~~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~-----~~~i~~~~~~--~~~~~~~a~~ 232 (254)
.+|... ..+++...+++.+ ||.|+|||||+|+.++ ...+.+++.. ..+++++++.
T Consensus 134 ------------~lG~~~-----~~~~~~~~~~l~~-GD~lll~SDGl~e~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 195 (242)
T 3t91_A 134 ------------PIGIIN-----EFDVEVVSEQLKA-GDLLIMMSDGIFEGPKHVENHDLWMKRKMKGLKTNDPQEIADL 195 (242)
T ss_dssp ---------------CCC-----TTCEEEEEEECCT-TCEEEEECHHHHTCSTTCSCHHHHHHHHHHTCCCCCHHHHHHH
T ss_pred ------------eeEecC-----CCcceEEEEEeCC-CCEEEEECCCcccCCCcccchHHHHHHHHHHhcCCCHHHHHHH
Confidence 223222 3567777888888 9999999999999998 5677777764 3589999999
Q ss_pred HHHHHHhCC-C--CCCcEEEEEEe
Q 025334 233 LTEEALARN-S--SDDISCVVVKF 253 (254)
Q Consensus 233 l~~~a~~~~-~--~Dn~Tvivv~~ 253 (254)
|++.+...+ . .||+|++++++
T Consensus 196 l~~~~~~~~~~~~~DDiTvv~i~~ 219 (242)
T 3t91_A 196 LMEEVIRTRSGQIEDDMTVVVVRI 219 (242)
T ss_dssp HHHHHHHHTTSCCCSCEEEEEEEE
T ss_pred HHHHHHHHcCCCCCCceEEEEEEE
Confidence 999998754 2 69999999986
No 21
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.85 E-value=7.2e-20 Score=144.13 Aligned_cols=189 Identities=10% Similarity=0.049 Sum_probs=141.9
Q ss_pred ceeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 025334 4 HVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCIT 83 (254)
Q Consensus 4 ~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~ 83 (254)
.+++|..+........+.|.+.+.. .++..+++|+||+|.+..|..++..+...+.+.. ..++ .+.+..+
T Consensus 3 ~~~~~~~~~p~~~~~v~GD~y~~~~----~~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~~--~~~p----~~il~~l 72 (193)
T 3zt9_A 3 KLEVGIYTRAREGEIACGDACLVKR----VEGVIFLAVGDGIGHGPEAARAAEIAIASMESSM--NTGL----VNIFQLC 72 (193)
T ss_dssp CCCEEEEEECCTTCSSCSEEEEEEE----ETTEEEEEEEEESSSHHHHHHHHHHHHHHHHHHT--TSCH----HHHHHHH
T ss_pred ccEEEEEEeccCCCCCCCCeEEEEE----eCCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcc--cCCH----HHHHHHH
Confidence 7889999999877778999997532 2467899999999988888888887777776532 2233 3455666
Q ss_pred HHHHHhhhcccCCCCccEEEEEEEe--CCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCchHHHHHhcCCeEecCCCCCC
Q 025334 84 DTTILEKAVDLGKGGSTAVTAILIN--CEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVP 161 (254)
Q Consensus 84 ~~~l~~~~~~~~~~~~tt~~~~~~~--~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~e~~r~~~~g~~~~~~~~~~~ 161 (254)
|+.+... .+.|++.+.++ .++++++|+|+++.|++|++.+.++.....
T Consensus 73 n~~l~~~-------~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~~g----------------------- 122 (193)
T 3zt9_A 73 HRELRGT-------RGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLATPG----------------------- 122 (193)
T ss_dssp HHHHTTS-------SCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCBCC-----------------------
T ss_pred HHHHhcc-------CceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCCCC-----------------------
Confidence 7776532 23555566665 679999999999999999987664432210
Q ss_pred ccCCccccccccCCccccCCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCHHHHHHHHHcccCHHHHHHHHHHHHHhCC
Q 025334 162 RVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTEEALARN 241 (254)
Q Consensus 162 ~~~~~~~~tr~~G~~~~~~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 241 (254)
.+|... ..+++...+++.+ |+.|+|+|||+++.+..+++..++ ..+|+++|+.|++.+ ..
T Consensus 123 ----------~lG~~~-----~~~~~~~~~~l~~-gd~l~l~sDGl~e~~~~~~~~~~~--~~~~~~~a~~l~~~~--~~ 182 (193)
T 3zt9_A 123 ----------ILGYNY-----PHQLLIAKGSYQE-GDLFLIHSDGIQEGAVPLALLANY--RLTAEELVRLIGEKY--GR 182 (193)
T ss_dssp ----------BBTTBC-----CSSCCCEEEECCT-TCEEEEECTTSCTTCSCGGGGGCT--TSCHHHHHHHHHHHH--CC
T ss_pred ----------ceeccC-----CccceeEEeccCC-CCEEEEECCCCCCccChhhhhchh--cCCHHHHHHHHHHHh--Cc
Confidence 133221 2256677888888 999999999999999998887765 358999999999998 35
Q ss_pred CCCCcEEEEEE
Q 025334 242 SSDDISCVVVK 252 (254)
Q Consensus 242 ~~Dn~Tvivv~ 252 (254)
..||+|+++++
T Consensus 183 ~~Dd~tvlv~r 193 (193)
T 3zt9_A 183 RDDDVAVIVAR 193 (193)
T ss_dssp TTSCEEEEEEC
T ss_pred CCCCeEEEEEC
Confidence 79999999985
No 22
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.82 E-value=1.1e-18 Score=143.16 Aligned_cols=202 Identities=15% Similarity=0.075 Sum_probs=131.0
Q ss_pred ceeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHH---cCC-CCCCCHHHHHHHH
Q 025334 4 HVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENIL---NEP-NFWQDPESAVRRA 79 (254)
Q Consensus 4 ~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~---~~~-~~~~~~~~~l~~~ 79 (254)
.+.+++...... ....|.+-+.. ..++..+++|+||+|++..|..++..+...+. +.. .........+.+.
T Consensus 37 ~~~~~~~~~p~~--~vgGD~yd~~~---~~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 111 (255)
T 3f79_A 37 GLEFSHRIIPSL--YLSGDFVDYFR---VDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEV 111 (255)
T ss_dssp TEEEEEEEECSS--SSCSEEEEEEE---ETTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC----CHHHH
T ss_pred CEEEEEEEeEhh--hcCceEEeEEE---eCCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCHHHH
Confidence 456667666663 26899884321 13457899999999988777666655544332 210 0001122336677
Q ss_pred HHHHHHHHHhhhcccCCCCccEEEEEEEe--CCEEEEEEcCCC-cEEEEeCCeeeeCCCCCCCCchHHHHHhcCCeEecC
Q 025334 80 YCITDTTILEKAVDLGKGGSTAVTAILIN--CEKLVVANVGDS-RAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNF 156 (254)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~tt~~~~~~~--~~~~~~~~vGDs-r~~~~~~~~~~~lt~dh~~~~e~~r~~~~g~~~~~~ 156 (254)
+..+|+.+... .....+|+++++++ +++++++|+|++ +.|++++|.+.+++.++.+
T Consensus 112 l~~ln~~l~~~----~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~----------------- 170 (255)
T 3f79_A 112 LAHINRGLINT----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP----------------- 170 (255)
T ss_dssp HHHHHHHHBTT----BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC---------------------
T ss_pred HHHHHHHHHhc----CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCCce-----------------
Confidence 88888888753 24578899998885 679999999995 5899999999988876642
Q ss_pred CCCCCccCCccccccccCCccccCCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCHHH-------HHHHHHcc-cCHHH
Q 025334 157 PGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQD-------AADAIKNI-KDARS 228 (254)
Q Consensus 157 ~~~~~~~~~~~~~tr~~G~~~~~~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~~~-------i~~~~~~~-~~~~~ 228 (254)
+|... ..+++...+++.+ ||.|+|||||+++.++.++ +.+++.+. .+++.
T Consensus 171 ----------------lG~~~-----~~~~~~~~~~l~~-gd~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~~~~~~~ 228 (255)
T 3f79_A 171 ----------------VGLFD-----DATYDDRVMELPP-SFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDG 228 (255)
T ss_dssp -----------------CCSS-----CCCCCC---BCCS-SEEEEEECSCCCCCSCC---CCTTTSSHHHHHHHSCSSHH
T ss_pred ----------------EEEcC-----CCceEEEEEEECC-CCEEEEECCCcCcccCCCcchhhHHHHHHHHHhcCCCHHH
Confidence 33222 3455666777777 9999999999999998777 78887653 36788
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEeC
Q 025334 229 AARHLTEEALARNSSDDISCVVVKFN 254 (254)
Q Consensus 229 ~a~~l~~~a~~~~~~Dn~Tvivv~~~ 254 (254)
+++.|. .+...+..||+|+++++..
T Consensus 229 ~~~~l~-~~~~~~~~DDiTvl~v~~~ 253 (255)
T 3f79_A 229 LRQVFG-LANLAEMPDDIALLVLSRN 253 (255)
T ss_dssp HHHHC------CCSSSCEEEEEEEEC
T ss_pred HHHHHH-hccCCCCCCCEEEEEEEec
Confidence 888877 5667788999999999863
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.43 E-value=8.3e-11 Score=102.28 Aligned_cols=198 Identities=12% Similarity=0.091 Sum_probs=122.4
Q ss_pred ceeEEEeeecCCCC-CCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Q 025334 4 HVTHGYHLVKGKAG-HPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCI 82 (254)
Q Consensus 4 ~~~~~~~s~~G~~~-~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~ 82 (254)
.+.+++........ ....|.+-+.. . ++..+++|+|+.|.+..|.+++..+...+........++. +.+..
T Consensus 35 ~~~~~~~y~P~~~~~~vgGD~y~~~~--~--~~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~~~~p~----~il~~ 106 (399)
T 3ke6_A 35 GADIAAEYLVAAEDTAAGGDWFDALA--L--GDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAGYTVV----EALEA 106 (399)
T ss_dssp TEEEEEEEECSSSSCSCCSEEEEEEE--C--SSEEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHTTCCHH----HHHHH
T ss_pred CeEEEEEEEECCCCCCCCCceEEEEE--E--CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCHH----HHHHH
Confidence 45666666665532 25688885421 2 2388999999999776666555544444433111122333 34455
Q ss_pred HHHHHHhhhcccCCCCccEEEEEEEe--CCEEEEEEcCCCcEEEEe-CCeeeeCCCCCCCCchHHHHHhcCCeEecCCCC
Q 025334 83 TDTTILEKAVDLGKGGSTAVTAILIN--CEKLVVANVGDSRAVICK-NGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGD 159 (254)
Q Consensus 83 ~~~~l~~~~~~~~~~~~tt~~~~~~~--~~~~~~~~vGDsr~~~~~-~~~~~~lt~dh~~~~e~~r~~~~g~~~~~~~~~ 159 (254)
+|+ +..... ....+|++++.++ .+++.++++|....|+++ ++.+..+..++.+
T Consensus 107 ln~-~~~~~~---~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~~~-------------------- 162 (399)
T 3ke6_A 107 VDR-FHKQVP---GSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAG-------------------- 162 (399)
T ss_dssp HHH-HGGGST---TCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCSCC--------------------
T ss_pred HHH-HHHhcC---CCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCCCc--------------------
Confidence 565 333221 3456677777775 679999999999999998 6667666554421
Q ss_pred CCccCCccccccccCCccccCCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCH------HHHHHHHHccc---------
Q 025334 160 VPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSN------QDAADAIKNIK--------- 224 (254)
Q Consensus 160 ~~~~~~~~~~tr~~G~~~~~~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~------~~i~~~~~~~~--------- 224 (254)
.+|. ...++...+++.+ |+.|+|+|||+.+.... +.+.+++.+..
T Consensus 163 ------------plG~-------~~~~~~~~~~l~~-Gd~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~ 222 (399)
T 3ke6_A 163 ------------PLGS-------GTGFPVRSEVLNI-GDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLD 222 (399)
T ss_dssp ------------CTTS-------SCCCCCEEEECCT-TCEEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC--------
T ss_pred ------------ceEC-------CCCceeEEEEECC-CCEEEEECCCcccCCCCCcchhHHHHHHHHHHhhccccccccc
Confidence 1232 1234456678888 99999999999998764 45666665421
Q ss_pred CHHHHHHHHHHHHHh-----CCCCCCcEEEEEEe
Q 025334 225 DARSAARHLTEEALA-----RNSSDDISCVVVKF 253 (254)
Q Consensus 225 ~~~~~a~~l~~~a~~-----~~~~Dn~Tvivv~~ 253 (254)
+|...++.|++.+.+ .+..||+|++++++
T Consensus 223 ~~~~~~~~l~~~~~~~~~~~~~~~DDitvl~vr~ 256 (399)
T 3ke6_A 223 APARPIDRLCSDTLELLLRSTGYNDDVTLLAMQR 256 (399)
T ss_dssp --CCHHHHHHHHHHHHHHHTTCCSSCEEEEEEEE
T ss_pred ChhhHHHHHHHHHHHHhccCCCCCCceEEEEEEe
Confidence 233444445544433 45789999999986
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=99.04 E-value=1.3e-08 Score=88.24 Aligned_cols=194 Identities=13% Similarity=0.072 Sum_probs=105.2
Q ss_pred eeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHH---HHHHHHHHHcCC-----CCCCCHHHHH
Q 025334 5 VTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFL---RTHLFENILNEP-----NFWQDPESAV 76 (254)
Q Consensus 5 ~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~---~~~~~~~l~~~~-----~~~~~~~~~l 76 (254)
+.+++..... .....|.+-+. ...++...++|+|+.|-+-.|.++ .+.++..+.... ....+ .
T Consensus 177 ~~~~~~~~p~--~~vgGD~yd~~---~~~~~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~----p 247 (394)
T 3eq2_A 177 LEFSHRIIPS--LYLSGDFVDYF---RVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFK----P 247 (394)
T ss_dssp EEEEEEEC-------CCCEEECC---EETTTEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCC----H
T ss_pred eEEEEEeccc--hhcCccEEeEE---EeCCCcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCC----H
Confidence 4455544443 22567887432 113557889999987744333332 233334333211 11123 3
Q ss_pred HHHHHHHHHHHHhhhcccCCCCccEEEEEEEe--CCEEEEEEcCCCc-EEEEeCCeeeeCCCCCCCCchHHHHHhcCCeE
Q 025334 77 RRAYCITDTTILEKAVDLGKGGSTAVTAILIN--CEKLVVANVGDSR-AVICKNGVAKQLSVDHEPSSEREHIEGRGGFV 153 (254)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~~~--~~~~~~~~vGDsr-~~~~~~~~~~~lt~dh~~~~e~~r~~~~g~~~ 153 (254)
.+.+..+|+.+.... .....|++.++++ .+++.+++.|... .++.++|.+..+.....
T Consensus 248 ~~~l~~ln~~l~~~~----~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~--------------- 308 (394)
T 3eq2_A 248 SEVLAHINRGLINTK----LGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGL--------------- 308 (394)
T ss_dssp HHHHHHHHHHHHHTT----CCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC-----------------
T ss_pred HHHHHHHHHHHhccC----cCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCc---------------
Confidence 445566677776421 2344666666665 6799999999865 67778888876653332
Q ss_pred ecCCCCCCccCCccccccccCCccccCCcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCH-------HHHHHHHHcccCH
Q 025334 154 SNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSN-------QDAADAIKNIKDA 226 (254)
Q Consensus 154 ~~~~~~~~~~~~~~~~tr~~G~~~~~~~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~-------~~i~~~~~~~~~~ 226 (254)
.+|-.. ........+++.+ |+.|+|.|||+.+.... +.+.+.+.....+
T Consensus 309 ------------------plG~~~-----~~~~~~~~~~l~~-gd~l~l~TDG~~e~~~~~~~~~~~~~l~~~l~~~~~~ 364 (394)
T 3eq2_A 309 ------------------PVGLFD-----DATYDDRVMELPP-SFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGT 364 (394)
T ss_dssp ------------------CCSCCC-----CC--CCEEEECCS-SCEEEECSSCCCC-----CCSTTTTTSHHHHHTTC--
T ss_pred ------------------eeEecC-----CCceEEEEEEeCC-CCEEEEECCCcccccCcccchhhHHHHHHHHHhcchh
Confidence 123221 2344556678888 99999999999997543 4456666553322
Q ss_pred HHHHHHHHHHHHh---CCCCCCcEEEEEEe
Q 025334 227 RSAARHLTEEALA---RNSSDDISCVVVKF 253 (254)
Q Consensus 227 ~~~a~~l~~~a~~---~~~~Dn~Tvivv~~ 253 (254)
.+.|.+.... ....||+|+++++.
T Consensus 365 ---~~~l~~~~~~~~~~~~~DDit~l~i~~ 391 (394)
T 3eq2_A 365 ---LDGLRQVFGLANLAEMPDDIALLVLSR 391 (394)
T ss_dssp ---CHHHHHHHSCCCSCC--CCCEEEEEC-
T ss_pred ---HHHHHHHhcccCCCCCCCceEEEEEec
Confidence 2333333322 23479999999975
No 25
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=28.89 E-value=40 Score=26.90 Aligned_cols=51 Identities=14% Similarity=0.177 Sum_probs=29.3
Q ss_pred EEEEe-CCCCChHHHHHHHHHHHHHH----cC--CCCCCCHHHHHHHHHHHHHHHHHh
Q 025334 39 FAIFD-GHLSHEIPDFLRTHLFENIL----NE--PNFWQDPESAVRRAYCITDTTILE 89 (254)
Q Consensus 39 ~~V~D-G~Gg~~~a~~~~~~~~~~l~----~~--~~~~~~~~~~l~~~~~~~~~~l~~ 89 (254)
.|||| |+||-.+++.+.+.+...=. .. ..+.....+.+.+...++-+.+.+
T Consensus 10 IgvfDSGvGGLtv~~~i~~~lp~~~~iy~~D~a~~PYG~~~~~~i~~~~~~~~~~L~~ 67 (268)
T 3out_A 10 IGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLID 67 (268)
T ss_dssp EEEEESSSTTHHHHHHHHHHCTTCCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHCCCCcEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 79999 99999888887776654211 11 123333344444444444455544
No 26
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=28.28 E-value=52 Score=16.06 Aligned_cols=16 Identities=38% Similarity=0.285 Sum_probs=13.0
Q ss_pred CCcEEEEeCCeeeeCC
Q 025334 119 DSRAVICKNGVAKQLS 134 (254)
Q Consensus 119 Dsr~~~~~~~~~~~lt 134 (254)
|-.+|+-++|.+..++
T Consensus 9 Dg~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 9 DAQAYVRKFGEWVLLS 24 (27)
T ss_dssp SSCEEEEETTEEEEGG
T ss_pred CcceeEEEcCeEEEcc
Confidence 6778888999888775
No 27
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=23.29 E-value=42 Score=29.76 Aligned_cols=74 Identities=8% Similarity=-0.057 Sum_probs=54.7
Q ss_pred ccccccCCccccCCcCCCCeEEEEEcCC-CCe----EEEEEcCCCcccCCHHHHHHHHHccc-----CHHHHHHHHHHHH
Q 025334 168 AVARAFGDKSLKMHLSSEPHVVMETIDD-DTE----FIILASDGLWKVMSNQDAADAIKNIK-----DARSAARHLTEEA 237 (254)
Q Consensus 168 ~~tr~~G~~~~~~~~~~~p~~~~~~l~~-~~~----~liL~SDG~~~~l~~~~i~~~~~~~~-----~~~~~a~~l~~~a 237 (254)
.++|++|-.. ..+.++....+.+ -|+ .+++++ |+.+...++.+++.+.. +....++.|++.+
T Consensus 43 ~l~~~~~l~~-----~~~~d~~~~~~~~~ig~~~~~~f~~t~---~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~~ 114 (543)
T 3c4z_A 43 PLSKCEALRE-----SLDLGFEGMCLEQPIGKRLFQQFLRTH---EQHGPALQLWKDIEDYDTADDALRPQKAQALRAAY 114 (543)
T ss_dssp CGGGGHHHHH-----HSCCCHHHHHTSSHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHH
T ss_pred CchHHHHHHh-----ccccCHHHhhccCcccHHHHHHHHhcC---CchhHHHHHHhhhhhhccCchhhHHHHHHHHHHHh
Confidence 5778887655 4566666555543 145 455666 88888888877776644 7889999999999
Q ss_pred HhCCCCCCcEEE
Q 025334 238 LARNSSDDISCV 249 (254)
Q Consensus 238 ~~~~~~Dn~Tvi 249 (254)
...+..||++.+
T Consensus 115 ~~~~~~d~~~~~ 126 (543)
T 3c4z_A 115 LEPQAQLFCSFL 126 (543)
T ss_dssp TSTTCTTCCTTS
T ss_pred hCchhhhhhccC
Confidence 999999998765
No 28
>4e9m_A Nucleotide-binding oligomerization domain-contain protein 1; innate immunity, RIPK2, protein binding; HET: FLC; 2.15A {Homo sapiens} PDB: 2b1w_A 2dbd_A
Probab=22.91 E-value=1.1e+02 Score=21.76 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=24.3
Q ss_pred cCCHHHHHHHHHcccCHHHHHHHHHHHHHhCC
Q 025334 210 VMSNQDAADAIKNIKDARSAARHLTEEALARN 241 (254)
Q Consensus 210 ~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 241 (254)
+++.+|. +++.....+...+++|++.+...|
T Consensus 55 vLs~EE~-EiV~~~~T~~dKaRrLLDlV~sKG 85 (144)
T 4e9m_A 55 YFSAEDA-EIVCACPTQPDKVRKILDLVQSKG 85 (144)
T ss_dssp SSCHHHH-HHHHTSSSHHHHHHHHHHHHHHHC
T ss_pred CCCHHHH-HHHhccCChHHHHHHHHHHHHHhh
Confidence 5788888 555667789999999999887654
No 29
>2nz7_A NOD1, caspase recruitment domain-containing protein 4, CARD4; helix swapped, disulfide bond, apoptosis; 1.90A {Homo sapiens} PDB: 2nsn_A
Probab=22.42 E-value=1.3e+02 Score=19.91 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=24.6
Q ss_pred cCCHHHHHHHHHcccCHHHHHHHHHHHHHhCC
Q 025334 210 VMSNQDAADAIKNIKDARSAARHLTEEALARN 241 (254)
Q Consensus 210 ~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 241 (254)
++++++ ..+......+..-++.|++.+..+|
T Consensus 41 VL~~ee-~~I~~~~~T~~~kaR~Lld~v~~KG 71 (98)
T 2nz7_A 41 YFSAED-AEIVCACPTQPDKVRKILDLVQSKG 71 (98)
T ss_dssp SSCHHH-HHHHHTCCSHHHHHHHHHHHHHHHC
T ss_pred CCCHHH-HHHHccCCCcHHHHHHHHHHHHHHh
Confidence 567888 7777666788999999998886654
No 30
>1dgn_A Iceberg (protease inhibitor); antiparallel six-helix bundle, greek-KEY, hydrolase inhibitor; NMR {Homo sapiens} SCOP: a.77.1.3
Probab=21.92 E-value=1.3e+02 Score=19.29 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=26.0
Q ss_pred ccCCHHHHHHHHHcccCHHHHHHHHHHHHHhCC
Q 025334 209 KVMSNQDAADAIKNIKDARSAARHLTEEALARN 241 (254)
Q Consensus 209 ~~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 241 (254)
+++..+|...+-.....+...|+.|++.....|
T Consensus 32 ~VLn~~E~e~i~~~~~t~~dkar~LiD~V~~KG 64 (89)
T 1dgn_A 32 EVISQEDMNKVRDENDTVMDKARVLIDLVTGKG 64 (89)
T ss_dssp TCSCHHHHHHHHTCCSSHHHHHHHHHHHHHHTC
T ss_pred CcccHHHHHHHHhccCchHHHHHHHHHHHHHHh
Confidence 467888888887766677888999998887654
No 31
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=21.26 E-value=60 Score=25.86 Aligned_cols=53 Identities=8% Similarity=0.066 Sum_probs=32.1
Q ss_pred EEEEEe-CCCCChHHHHHHHHHHHHHH----c--CCCCCCCHHHHHHHHHHHHHHHHHhh
Q 025334 38 LFAIFD-GHLSHEIPDFLRTHLFENIL----N--EPNFWQDPESAVRRAYCITDTTILEK 90 (254)
Q Consensus 38 l~~V~D-G~Gg~~~a~~~~~~~~~~l~----~--~~~~~~~~~~~l~~~~~~~~~~l~~~ 90 (254)
-.|||| |+||--+.+.+.+.++..=+ . ...+.....+.+.+...++-+.+.+.
T Consensus 7 ~IgvfDSGvGGltv~~~i~~~lP~~~~iy~~D~a~~PYG~ks~~~i~~~~~~~~~~L~~~ 66 (269)
T 3ist_A 7 AIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDR 66 (269)
T ss_dssp CEEEEESSSTTHHHHHHHHHHCTTCCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cEEEEECCccHHHHHHHHHHHCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
Confidence 479999 89999888888777665211 1 12344444555555555555555543
Done!