BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025335
(254 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356566559|ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 525
Score = 296 bits (757), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 150/227 (66%), Positives = 167/227 (73%), Gaps = 17/227 (7%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGKLIT 74
E +VYMWGYLPG SPEKSPILSP P L DSWKDVCGGGCGFA+ SE GKLIT
Sbjct: 61 EKMVYMWGYLPGASPEKSPILSPAPVTLSDPSLAVDSWKDVCGGGCGFAMVISEKGKLIT 120
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WGSADDEGQSYL SGKHGE P + LPTEASVVKAAAGWAHC SVTE GEVY WGW+ECV
Sbjct: 121 WGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVTEEGEVYAWGWKECV 180
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------------SDKRAGEEVVKRRK 181
PS KV DF + GS QKD GKQS+ EQ P +K+ G+EVVKRRK
Sbjct: 181 PSGKVITDFITVGSLQKDIAGKQSSSIAEQGSPQSSNTSSGSDSHHDNKKVGDEVVKRRK 240
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ +R++S++ ASGDEFFT+SP LVTL GVKIT V+ GGRHTL LS
Sbjct: 241 ITFSRQDSDSQASGDEFFTVSPSLVTLGNGVKITSVSLGGRHTLALS 287
>gi|255586057|ref|XP_002533695.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526406|gb|EEF28690.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 478
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/248 (62%), Positives = 177/248 (71%), Gaps = 29/248 (11%)
Query: 1 MEMNGSKREENEKMEEC-KETVVYMWGYLPGTSPEKSPILSPIPARLCGG---DSWKDVC 56
M +NG+ EE+ KMEEC K T VYM GYLPG SPEKSPILSPI + G DSWKDVC
Sbjct: 1 MAINGNGEEEDVKMEECCKVTAVYMCGYLPGISPEKSPILSPIQVPISDGGGFDSWKDVC 60
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GGCGFA+A S SG LITWGS D+EGQSYLTSGKHGE PEPFPLP EASVVKAAAGWAHC
Sbjct: 61 SGGCGFAMAISGSGNLITWGSTDEEGQSYLTSGKHGEIPEPFPLPCEASVVKAAAGWAHC 120
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS-------- 168
VSVTE GEV+TWGW+ECVPS K+ Q+D+TGKQ+AL + S
Sbjct: 121 VSVTETGEVFTWGWKECVPSVKI---------IQRDNTGKQNALLQTEKVSSRSEGSSLT 171
Query: 169 --------DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
KR G+E+VKRR+ S +E+ E+ SGDEFFT+ P +VTL PGV+IT VAAG
Sbjct: 172 RGTVLNSDSKRTGDEIVKRRRVSPTKEDFESSPSGDEFFTVLPLMVTLAPGVRITNVAAG 231
Query: 221 GRHTLILS 228
GRHTL LS
Sbjct: 232 GRHTLALS 239
>gi|356523185|ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Glycine max]
Length = 528
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/232 (64%), Positives = 167/232 (71%), Gaps = 20/232 (8%)
Query: 17 CKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGKL 72
C E +VYMWGYLPG SPEKSPILSP P L GDSWKDVCGGGCGFA+A SE GKL
Sbjct: 59 CAEKMVYMWGYLPGASPEKSPILSPAPVNLSDRSLAGDSWKDVCGGGCGFAMAISEKGKL 118
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
ITWGSADDEGQSYL SGKHGE P + LPTEASVVKAAAGWAHC SV E GEVY WGW+E
Sbjct: 119 ITWGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVNEEGEVYAWGWKE 178
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSA----------------LPTEQAPPSDKRAGEEV 176
CVPS KV DF + GSFQKD GKQ + + +K+ G+EV
Sbjct: 179 CVPSGKVITDFITVGSFQKDVAGKQRSXWNFRHXTGSPQSSNTSSGSDSHHDNKKVGDEV 238
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+KRRK + +R++S++ ASGDEFFT+SP LVTL GVKIT VA GGRHTL LS
Sbjct: 239 LKRRKITFSRQDSDSQASGDEFFTVSPSLVTLASGVKITSVAVGGRHTLALS 290
>gi|449448608|ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 485
Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 146/245 (59%), Positives = 165/245 (67%), Gaps = 17/245 (6%)
Query: 1 MEMNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVC 56
M+ + KM + +VYMWGYLPG P+KS +L P P RL GGDSWK+VC
Sbjct: 1 MKEENAADHNGAKMANKIDALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVC 60
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GGGCGFA+A S+SGKLITWG+AD+EGQ +LTSGKHGE PE FP PTE VVKA AGWAHC
Sbjct: 61 GGGCGFAMAISDSGKLITWGAADEEGQIFLTSGKHGEIPEAFPFPTEDLVVKAVAGWAHC 120
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD------- 169
VSVTEAGEVYTWGW EC+PS K RD G KDSTGKQS EQA P D
Sbjct: 121 VSVTEAGEVYTWGWSECIPSMKTLRDLAIGGGLLKDSTGKQSLTTAEQAGPQDSNGVDRM 180
Query: 170 ------KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
KR GEE KRRK +S +E++E + GD+ FT PCLV PGVKI VAAGGRH
Sbjct: 181 DSQLDNKRVGEETAKRRKINSVKEDTEISSPGDDLFTTLPCLVNFGPGVKIAAVAAGGRH 240
Query: 224 TLILS 228
TL LS
Sbjct: 241 TLALS 245
>gi|449519078|ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 472
Score = 286 bits (731), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 144/232 (62%), Positives = 161/232 (69%), Gaps = 17/232 (7%)
Query: 14 MEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSES 69
M + +VYMWGYLPG P+KS +L P P RL GGDSWK+VCGGGCGFA+A S+S
Sbjct: 1 MANKIDALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVCGGGCGFAMAISDS 60
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GKLITWG+AD+EGQ +LTSGKHGE PE FP PTE VVKA AGWAHCVSVTEAGEVYTWG
Sbjct: 61 GKLITWGAADEEGQIFLTSGKHGEIPEAFPFPTEDLVVKAVAGWAHCVSVTEAGEVYTWG 120
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD-------------KRAGEEV 176
W EC+PS K RD G KDSTGKQS EQA P D KR GEE
Sbjct: 121 WSECIPSMKTLRDLAIGGGLLKDSTGKQSLTTAEQAGPQDSNGVDRMDSQLDNKRVGEET 180
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
KRRK +S +E++E + GD+ FT PCLV PGVKI VAAGGRHTL LS
Sbjct: 181 AKRRKINSVKEDTEISSPGDDLFTTLPCLVNFGPGVKIAAVAAGGRHTLALS 232
>gi|255566472|ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
gi|223536498|gb|EEF38145.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
Length = 476
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/237 (60%), Positives = 172/237 (72%), Gaps = 12/237 (5%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
MNG +E + E KE +V+MWGYLPG P++SPILSP+ R G SWKDVCGGGCGF
Sbjct: 1 MNGEGKEVMKMEEMVKEKLVFMWGYLPGALPQRSPILSPVVVR-ADGYSWKDVCGGGCGF 59
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A SESGKLITWGS DD GQSY+TSGKHGE PEPFPLPTEAS++KAAAGWAHC++ T+
Sbjct: 60 AMAISESGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIMKAAAGWAHCIAATDT 119
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR----------- 171
GEVYTWGW+EC+PS KV D AG +KD + S TEQ P +
Sbjct: 120 GEVYTWGWKECIPSGKVFGDPSVAGGTEKDVFERHSPFLTEQVSPRSQSSRSTGGIDGRG 179
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+G+E KRR+ SSA++ +E+ +SGDE + PCLVTLNPGV+IT VAAGGRHTL LS
Sbjct: 180 SGDESTKRRRISSAKQSAESSSSGDETLSALPCLVTLNPGVRITTVAAGGRHTLALS 236
>gi|359482088|ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like isoform
1 [Vitis vinifera]
Length = 514
Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 152/248 (61%), Positives = 180/248 (72%), Gaps = 25/248 (10%)
Query: 2 EMNGSKRE-ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVC 56
+ +GS+ E E KMEE +VVYMWGYLPG S + SP+LSP+P L DSWKDVC
Sbjct: 17 DCDGSEGEGEAMKMEE---SVVYMWGYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVC 73
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GGGCGFA+A SESGKLITWGS DD GQSYLTSG+HGETPEPFPLPTEA +VKAAAGWAHC
Sbjct: 74 GGGCGFAVAISESGKLITWGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHC 133
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP--------- 167
VS+T+ GE YTWGW+ECVPS KV D + F+KDS GKQS L TEQ P
Sbjct: 134 VSLTDKGEAYTWGWKECVPSGKVLLD-STGVRFEKDSFGKQSLLQTEQEGPKPQSSNSTG 192
Query: 168 ------SDKRAGEEVVKRRKTSSAREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAG 220
+++A E +K+R+TSSA++E E+ + S DE F SPCLVTL PGV+I+ +AAG
Sbjct: 193 GMLSRVDNRKAREGSIKKRRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAG 252
Query: 221 GRHTLILS 228
GRHTL LS
Sbjct: 253 GRHTLALS 260
>gi|224098477|ref|XP_002311187.1| predicted protein [Populus trichocarpa]
gi|222851007|gb|EEE88554.1| predicted protein [Populus trichocarpa]
Length = 253
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/247 (58%), Positives = 173/247 (70%), Gaps = 19/247 (7%)
Query: 3 MNGSKREENE-KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG 61
MNG ++EE M+ E +VYMWGYLPG P++SPILSP+ R +WKDVCGGGCG
Sbjct: 1 MNGERKEEGVVNMDVHNEKLVYMWGYLPGALPQRSPILSPLAVRSTV-YAWKDVCGGGCG 59
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
FA+A SESGKLITWGS DD GQSY+TSGKHGETPE FPLPTEAS+VKAAAGWAHCV+ T
Sbjct: 60 FAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEAFPLPTEASIVKAAAGWAHCVAATG 119
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------------- 167
GEVYTWGW+EC+PS KV D AG +KD +Q+ TEQ P
Sbjct: 120 NGEVYTWGWKECIPSGKVFSDPSGAGGMEKDVFERQNLFFTEQGSPRSQGPRSSGGSGTL 179
Query: 168 --SDKRAG-EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
D R +E KRR+ SSA++ +E+ ++GDE + PCLVTLNPGV+I V+AGGRHT
Sbjct: 180 SGLDGRGSKDESTKRRRISSAKQAAESSSTGDETPSAFPCLVTLNPGVRIVTVSAGGRHT 239
Query: 225 LILSGKS 231
L LSGKS
Sbjct: 240 LTLSGKS 246
>gi|356539897|ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 480
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/239 (60%), Positives = 173/239 (72%), Gaps = 13/239 (5%)
Query: 3 MNGSKREENE-KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC-GGDSWKDVCGGGC 60
MNG E + +ME KE +VYMWGYLPG P+++P+L+P+ R+ G SWKDVCGGGC
Sbjct: 1 MNGEGSEAMQVEMEIEKERLVYMWGYLPGALPQRTPLLTPVLVRVPPSGYSWKDVCGGGC 60
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
GFA+A SE GKLITWGS DD GQSY+TSGKHGE PEPFPLPTE ++VKAAAGWAHCVSVT
Sbjct: 61 GFAMAISEPGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSVT 120
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------- 170
+ GEVYTWGWRECVPS KV + + S +KD G+QS+ TEQ P +
Sbjct: 121 DCGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPGRQSSFLTEQVSPRSQGSKSTGGTAS 180
Query: 171 -RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+GEE KRR+ SSA++ +E +S D+ T PCLVTLNPGV+I VAAGGRHTL LS
Sbjct: 181 GTSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALS 239
>gi|356569137|ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Glycine max]
Length = 472
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 143/238 (60%), Positives = 173/238 (72%), Gaps = 15/238 (6%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC-GGDSWKDVCGGGCG 61
MNG E +E M+ KE++VYMWGYLPG P+++P+L+P+ R+ G WKDVCGGGCG
Sbjct: 1 MNG---EGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCG 57
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
FA+A SE GKLITWGS DD GQSY+TSGKHGETPEPFPLPTE ++VKAAAGWAHCVSVT+
Sbjct: 58 FAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTD 117
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK----------- 170
GEVYTWGWRECVPS KV + + S +KD +QS+ TEQ P +
Sbjct: 118 CGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSFLTEQVSPRSQGSKSTGGTASG 177
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+GEE KRR+ SSA++ +E +S D+ T PCLVTLNPGV+I VAAGGRHTL LS
Sbjct: 178 TSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALS 235
>gi|225449388|ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
vinifera]
Length = 484
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 145/244 (59%), Positives = 171/244 (70%), Gaps = 19/244 (7%)
Query: 3 MNGSKREENEK--MEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGG-DSWKDVCGGG 59
MNG + +E ME +E +V+M GYLPG P++SP+LSPI R +W+DVCGGG
Sbjct: 1 MNGEGKGPDEAVVMEGVREKLVFMMGYLPGALPQRSPLLSPIAVRSPASIHAWRDVCGGG 60
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
CGFA+A SESGKLITWGS DD GQSY+TSGKHGETPEPFPLPTEAS+VKAAAGWAHC SV
Sbjct: 61 CGFAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASV 120
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP------------ 167
TE GEVYTWGW+ECVPS KV D GS +KD +QS+ TEQ P
Sbjct: 121 TENGEVYTWGWKECVPSGKVFGDPSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGV 180
Query: 168 ---SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
K GEE KRR+ S+++ +E+ +SGDE + PCLVTLNPGV+I VAAGGRHT
Sbjct: 181 SGTDSKGGGEESTKRRRMLSSKQAAES-SSGDETLSALPCLVTLNPGVRIANVAAGGRHT 239
Query: 225 LILS 228
L LS
Sbjct: 240 LALS 243
>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
Length = 467
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 141/226 (62%), Positives = 167/226 (73%), Gaps = 14/226 (6%)
Query: 7 KREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL-CGGDSWKDVCGGGCGFALA 65
K +E+ KMEE K+ VYMWGYLPG SPEKSPIL+PI DSWKDVCGGGCGFA+A
Sbjct: 9 KEQEDGKMEEGKKATVYMWGYLPGVSPEKSPILNPISVNYPDADDSWKDVCGGGCGFAMA 68
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
SE GKL+TWGSADDE QSY+T GKHGETPE F LP+EAS++KAAA + GE+
Sbjct: 69 ISEGGKLVTWGSADDENQSYVTCGKHGETPEAFLLPSEASILKAAA---------DTGEL 119
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ---APPSDKRAGEEVVKRRKT 182
YTWGW+ECVP K RD S G+ QKD+ KQ+ L TEQ A DKR GEE+VKRR+
Sbjct: 120 YTWGWKECVPLGKFPRDGASWGALQKDNAAKQNVLSTEQVSSASSDDKRNGEEIVKRRRV 179
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
S +EE+EN GDE+FT++P +V+L PGV+IT VAAGGRHTL LS
Sbjct: 180 -SLKEENENSEYGDEYFTVTPAIVSLGPGVRITSVAAGGRHTLALS 224
>gi|357460949|ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489804|gb|AES71007.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 464
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/238 (58%), Positives = 168/238 (70%), Gaps = 19/238 (7%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGG 59
MNG E EKM VYMWGYLPG P+++P+L+P+ R+ GG +WKDV GGG
Sbjct: 1 MNGGGCEVKEKM-------VYMWGYLPGALPQRTPLLTPVLVRVPATSGGYNWKDVSGGG 53
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
CGFA+A SESGKLITWGS DD GQSY+TSGKHGETPEPF LP E S+VKAA+ WAHCV+
Sbjct: 54 CGFAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFSLPNEVSIVKAASAWAHCVAA 113
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK--------- 170
T+ GEVYTWGW+EC+PS KV + S +KD+ GK S+ TEQ +
Sbjct: 114 TDCGEVYTWGWKECIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQVSSRSQVSKSTGGTV 173
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+GEE KRRK SSA++ ++ +SGD+ T PCLVTLNPGVKIT VAAGGRHTL+LS
Sbjct: 174 SSGEESSKRRKVSSAKQAAQTSSSGDDILTAMPCLVTLNPGVKITSVAAGGRHTLVLS 231
>gi|356551654|ref|XP_003544189.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 477
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/230 (59%), Positives = 168/230 (73%), Gaps = 12/230 (5%)
Query: 15 EECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGD-SWKDVCGGGCGFALATSESGKLI 73
E +TV+YMWGYLPG P+++P+L+P+ R+ D SW DVCGGGCGFA+A SESGKLI
Sbjct: 11 EGALQTVLYMWGYLPGALPQRTPLLTPVAVRVPPCDYSWNDVCGGGCGFAIAISESGKLI 70
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
TWGS DD GQSY+TSGKHGETPEPFPLPTEAS+VKAAAGWAHCV+VTE G VYTWGW+EC
Sbjct: 71 TWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVAVTEHGAVYTWGWKEC 130
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-----------RAGEEVVKRRKT 182
+PS +V + + S +KD G+ S + TEQ P + +GEE KRR+
Sbjct: 131 IPSGRVFGEPSTGVSLEKDVPGRHSQVSTEQVSPRSQGSRSTGGTASSNSGEESTKRRRV 190
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSL 232
SSA++ +E+ +S D+ T PCLVTLNPG++I VAAGGRHTL LS L
Sbjct: 191 SSAKQTAESSSSSDDSLTAFPCLVTLNPGIRIASVAAGGRHTLALSDTGL 240
>gi|356569139|ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Glycine max]
Length = 459
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 140/227 (61%), Positives = 170/227 (74%), Gaps = 6/227 (2%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC-GGDSWKDVCGGGCG 61
MNG E +E M+ KE++VYMWGYLPG P+++P+L+P+ R+ G WKDVCGGGCG
Sbjct: 1 MNG---EGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCG 57
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
FA+A SE GKLITWGS DD GQSY+TSGKHGETPEPFPLPTE ++VKAAAGWAHCVSVT+
Sbjct: 58 FAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTD 117
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
GEVYTWGWRECVPS KV + + S +KD +QS+ T + +GEE KRR+
Sbjct: 118 CGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSKST--GGTASGTSGEESSKRRR 175
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
SSA++ +E +S D+ T PCLVTLNPGV+I VAAGGRHTL LS
Sbjct: 176 VSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALS 222
>gi|356501083|ref|XP_003519358.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 477
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 138/244 (56%), Positives = 171/244 (70%), Gaps = 16/244 (6%)
Query: 1 MEMNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGD-SWKDVCGGG 59
M MN + ++ V+YMWGYLPG P+++P+L+P+ R+ D SW DVCGGG
Sbjct: 1 MAMNNGDGTDGGALQR----VLYMWGYLPGALPQRTPLLTPVAVRVPPCDYSWNDVCGGG 56
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
CGFA+A SESGKLITWGS DD GQSY+TSGKHGETPEPFPLPTE S+VKAAAGWAHCV+V
Sbjct: 57 CGFAIAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTETSIVKAAAGWAHCVAV 116
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK--------- 170
TE GEVYTWGW+EC+PS KV + + S +KD G+ + L TEQ P +
Sbjct: 117 TEHGEVYTWGWKECIPSGKVFGESSTGVSLEKDVPGRHTPLFTEQVSPRSQGSRSTGGTA 176
Query: 171 --RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+GEE KRR+ SSA++ +E+ +S D+ T PCLVTLNPG++I VAAGGRHTL LS
Sbjct: 177 SSNSGEESTKRRRVSSAKQTAESSSSSDDSLTAFPCLVTLNPGIRIASVAAGGRHTLALS 236
Query: 229 GKSL 232
L
Sbjct: 237 DTGL 240
>gi|297740323|emb|CBI30505.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 141/225 (62%), Positives = 165/225 (73%), Gaps = 21/225 (9%)
Query: 24 MWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGKLITWGSAD 79
MWGYLPG S + SP+LSP+P L DSWKDVCGGGCGFA+A SESGKLITWGS D
Sbjct: 1 MWGYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVCGGGCGFAVAISESGKLITWGSED 60
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
D GQSYLTSG+HGETPEPFPLPTEA +VKAAAGWAHCVS+T+ GE YTWGW+ECVPS KV
Sbjct: 61 DLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGKV 120
Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEVVKRRKTSS 184
D + F+KDS GKQS L TEQ P +++A E +K+R+TSS
Sbjct: 121 LLD-STGVRFEKDSFGKQSLLQTEQEGPKPQSSNSTGGMLSRVDNRKAREGSIKKRRTSS 179
Query: 185 AREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
A++E E+ + S DE F SPCLVTL PGV+I+ +AAGGRHTL LS
Sbjct: 180 AKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAGGRHTLALS 224
>gi|357460953|ref|XP_003600758.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489806|gb|AES71009.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 334
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/258 (55%), Positives = 170/258 (65%), Gaps = 39/258 (15%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGG 59
MNG E EKM VYMWGYLPG P+++P+L+P+ R+ GG +WKDV GGG
Sbjct: 1 MNGGGCEVKEKM-------VYMWGYLPGALPQRTPLLTPVLVRVPATSGGYNWKDVSGGG 53
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
CGFA+A SESGKLITWGS DD GQSY+TSGKHGETPEPF LP E S+VKAA+ WAHCV+
Sbjct: 54 CGFAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFSLPNEVSIVKAASAWAHCVAA 113
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP------------P 167
T+ GEVYTWGW+EC+PS KV + S +KD+ GK S+ TEQ P
Sbjct: 114 TDCGEVYTWGWKECIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQGMSNLFSMDICLQIP 173
Query: 168 SD-----------------KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
SD +GEE KRRK SSA++ ++ +SGD+ T PCLVTLNP
Sbjct: 174 SDFATVSSRSQVSKSTGGTVSSGEESSKRRKVSSAKQAAQTSSSGDDILTAMPCLVTLNP 233
Query: 211 GVKITKVAAGGRHTLILS 228
GVKIT VAAGGRHTL+LS
Sbjct: 234 GVKITSVAAGGRHTLVLS 251
>gi|334185962|ref|NP_190951.2| Regulator of chromosome condensation (RCC1) family protein
[Arabidopsis thaliana]
gi|332645627|gb|AEE79148.1| Regulator of chromosome condensation (RCC1) family protein
[Arabidopsis thaliana]
Length = 472
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 161/221 (72%), Gaps = 7/221 (3%)
Query: 14 MEECKETVVYMWGYLPGTSPEKSPILSPIPARLC----GGDSWKDVCGGGCGFALATSES 69
+ ECK TVVYM GYLPG + EKSPILSP+P RL GGDSWKDVCGGGCGFA+A SE
Sbjct: 11 IGECKATVVYMSGYLPGAASEKSPILSPVPVRLSAAVHGGDSWKDVCGGGCGFAMAISEK 70
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GKLITWGS DDEGQSY+ SGKHGETPEPFPLPTEA VV+A++GWAHC VTE GE +TWG
Sbjct: 71 GKLITWGSTDDEGQSYVASGKHGETPEPFPLPTEAPVVQASSGWAHCAVVTETGEAFTWG 130
Query: 130 WRECVPSAKVTRDFGSAGSFQKD--STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
W+EC+PS S S Q D S G +A T +++ GEE VKRR+ S+A++
Sbjct: 131 WKECIPSKDPVGKQQSGSSEQGDIASQGSNAASGTT-LQNENQKVGEESVKRRRVSTAKD 189
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E+E SG +FF +P LV++ GV+IT VA GGRHTL LS
Sbjct: 190 ETEGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALS 230
>gi|7630003|emb|CAB88345.1| putative protein [Arabidopsis thaliana]
Length = 487
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/219 (62%), Positives = 160/219 (73%), Gaps = 7/219 (3%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARLC----GGDSWKDVCGGGCGFALATSESGK 71
ECK TVVYM GYLPG + EKSPILSP+P RL GGDSWKDVCGGGCGFA+A SE GK
Sbjct: 13 ECKATVVYMSGYLPGAASEKSPILSPVPVRLSAAVHGGDSWKDVCGGGCGFAMAISEKGK 72
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
LITWGS DDEGQSY+ SGKHGETPEPFPLPTEA VV+A++GWAHC VTE GE +TWGW+
Sbjct: 73 LITWGSTDDEGQSYVASGKHGETPEPFPLPTEAPVVQASSGWAHCAVVTETGEAFTWGWK 132
Query: 132 ECVPSAKVTRDFGSAGSFQKD--STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
EC+PS S S Q D S G +A T +++ GEE VKRR+ S+A++E+
Sbjct: 133 ECIPSKDPVGKQQSGSSEQGDIASQGSNAASGT-TLQNENQKVGEESVKRRRVSTAKDET 191
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E SG +FF +P LV++ GV+IT VA GGRHTL LS
Sbjct: 192 EGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALS 230
>gi|297816690|ref|XP_002876228.1| hypothetical protein ARALYDRAFT_485777 [Arabidopsis lyrata subsp.
lyrata]
gi|297322066|gb|EFH52487.1| hypothetical protein ARALYDRAFT_485777 [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/232 (58%), Positives = 161/232 (69%), Gaps = 33/232 (14%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGK 71
ECK TVVYM GYLPG +PEKSPILSP+P RL GGDSWKDVCGGGCGFA+A SE GK
Sbjct: 13 ECKATVVYMSGYLPGAAPEKSPILSPVPVRLPAAVHGGDSWKDVCGGGCGFAMAISEKGK 72
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
LITWGS DDEGQSY+ SGKHGETPE FPLPTEA VV+A++GWAHC VTEAGE +TWGW+
Sbjct: 73 LITWGSTDDEGQSYVASGKHGETPELFPLPTEAPVVQASSGWAHCAVVTEAGEAFTWGWK 132
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD---------------KRAGEEV 176
EC+PS KD GKQ + +EQ + ++ GE+
Sbjct: 133 ECIPS--------------KDPVGKQQSGSSEQGEIASQGSNAASGMTLQNETRKVGEDS 178
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
VKRR+ S+A++E+E SG +FF +P LV++ GV+IT VA GGRHTL LS
Sbjct: 179 VKRRRVSTAKDETEGHTSGGDFFATAPSLVSVGLGVRITSVATGGRHTLALS 230
>gi|296086178|emb|CBI31619.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/221 (61%), Positives = 158/221 (71%), Gaps = 17/221 (7%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGG-DSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
M GYLPG P++SP+LSPI R +W+DVCGGGCGFA+A SESGKLITWGS DD G
Sbjct: 1 MMGYLPGALPQRSPLLSPIAVRSPASIHAWRDVCGGGCGFAMAISESGKLITWGSTDDLG 60
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
QSY+TSGKHGETPEPFPLPTEAS+VKAAAGWAHC SVTE GEVYTWGW+ECVPS KV D
Sbjct: 61 QSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGWKECVPSGKVFGD 120
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEVVKRRKTSSARE 187
GS +KD +QS+ TEQ P K GEE KRR+ S+++
Sbjct: 121 PSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGVSGTDSKGGGEESTKRRRMLSSKQ 180
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+E+ +SGDE + PCLVTLNPGV+I VAAGGRHTL LS
Sbjct: 181 AAES-SSGDETLSALPCLVTLNPGVRIANVAAGGRHTLALS 220
>gi|326533000|dbj|BAJ89345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 500
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/234 (54%), Positives = 163/234 (69%), Gaps = 20/234 (8%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSES 69
+ E K VV MWGYLPG SP++SP+L P+P RL GD+W+DVCGGGCGFA+A SES
Sbjct: 29 REEAGKGQVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAGDAWRDVCGGGCGFAMAISES 88
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GKL+TWGS DD GQSY+T+GKH ETPE FPLP++ ++ +A AGWAHCV++T+ G VYTWG
Sbjct: 89 GKLLTWGSTDDMGQSYVTAGKHEETPEAFPLPSDVAIARADAGWAHCVAITDEGVVYTWG 148
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP---------------PSDKRAGE 174
W+ECVP+ +V D S G+ +KD +QSA +Q PS+ R E
Sbjct: 149 WKECVPTGRVIADQASVGTLEKDE--RQSASANDQVSPRSQVSRTSSGAASGPSESRGTE 206
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ KRR+ SSA++ +++ SGDE + PC+VT N GVKIT VAAGGRHTL LS
Sbjct: 207 DSTKRRRLSSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRHTLALS 260
>gi|147790448|emb|CAN69973.1| hypothetical protein VITISV_001453 [Vitis vinifera]
Length = 498
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/237 (60%), Positives = 166/237 (70%), Gaps = 34/237 (14%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSE 68
KMEE +VVYMWGYLPG S + SP+LSP+P L DSWKDVCGGGCGFA+A SE
Sbjct: 2 KMEE---SVVYMWGYLPGASLQGSPLLSPVPVALPASTLSEDSWKDVCGGGCGFAVAISE 58
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
SGKLITWGS DD GQSYLTSG+HGETPEPFPLPTEA +VKAAAGWAHCVS+T+ GE YTW
Sbjct: 59 SGKLITWGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTW 118
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP---TEQAPP-------------SDKRA 172
GW+ECVPS KV DSTG A P TE P +++A
Sbjct: 119 GWKECVPSGKVLL----------DSTGTNVAKPELDTEGPKPQXSNSTGGMLSRVDNRKA 168
Query: 173 GEEVVKRRKTSSAREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E +K+R+TSSA++E E+ + S DE F SPCLVTL PGV+I+ VAAGGRHTL LS
Sbjct: 169 REGSIKKRRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTVAAGGRHTLALS 225
>gi|326511212|dbj|BAJ87620.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/245 (51%), Positives = 164/245 (66%), Gaps = 31/245 (12%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSES 69
+ E K VV MWGYLPG SP++SP+L P+P RL GD+W+DVCGGGCGFA+A SES
Sbjct: 29 REEAGKGQVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAGDAWRDVCGGGCGFAMAISES 88
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GKL+TWGS DD GQSY+T+GKH ETPE FPLP++ ++ +A AGWAHCV++T+ G VYTWG
Sbjct: 89 GKLLTWGSTDDMGQSYVTAGKHEETPEAFPLPSDVAIARADAGWAHCVAITDEGVVYTWG 148
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ------------------------- 164
W+ECVP+ +V D S G+ +KD +QSA +Q
Sbjct: 149 WKECVPTGRVIADQASVGTLEKDE--RQSASANDQGISHNKGNSIAVSPRSQVSRTSSGA 206
Query: 165 -APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+ PS+ R E+ KRR+ SSA++ +++ SGDE + PC+VT N GVKIT VAAGGRH
Sbjct: 207 ASGPSESRGTEDSTKRRRLSSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRH 266
Query: 224 TLILS 228
TL LS
Sbjct: 267 TLALS 271
>gi|449465846|ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
gi|449516435|ref|XP_004165252.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 491
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/250 (55%), Positives = 177/250 (70%), Gaps = 24/250 (9%)
Query: 3 MNG-SKREENEKM---EECKET-VVYMWGYLPGTSPEKSPILSPIPARLCGGDS-----W 52
MNG R E+E + E+ K+ +V+MWGYLPG P++SP+LSP+ RL G D+ W
Sbjct: 1 MNGEGSRGEDEIVGMEEDVKDNKIVFMWGYLPGALPQRSPLLSPVVVRLPGKDATDAHGW 60
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
+DVCGGGCGFA+A S +GKLITWG+ DD GQSY+TSGKHGETPEPFPLPTEAS+VKAAAG
Sbjct: 61 RDVCGGGCGFAVAISANGKLITWGATDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAG 120
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS---- 168
WAH V++T+ GEVYTWGW+ECVPS K+ D + ++++D +QS+ +Q P
Sbjct: 121 WAHTVAITDRGEVYTWGWKECVPSGKMFTDLSAGAAYERDVLERQSSSVIDQVSPRLQAS 180
Query: 169 ---------DKRA-GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
+ RA G E KRR+ SSA+ +E+ +S DE + PCLVTLNPGV+IT V+
Sbjct: 181 RSSGVVSSIEARAGGAESTKRRRVSSAKLAAESSSSSDETLSAVPCLVTLNPGVRITSVS 240
Query: 219 AGGRHTLILS 228
AGGRHTL LS
Sbjct: 241 AGGRHTLALS 250
>gi|357125846|ref|XP_003564600.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
1 [Brachypodium distachyon]
Length = 499
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 158/230 (68%), Gaps = 21/230 (9%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKLIT 74
KE VV MWGYLPG SP++SP+L+P+P RL GD+W+DVCGGGCGFA+A SESGKL+T
Sbjct: 32 KEQVVLMWGYLPGVSPQRSPLLAPVPVRLPLAATGDAWRDVCGGGCGFAMAISESGKLLT 91
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WGS DD GQSY+T+GKH ETPE FPLP++ + +A GWAHCV++TE G VYTWGW+ECV
Sbjct: 92 WGSTDDMGQSYVTAGKHEETPEAFPLPSDVVIARADTGWAHCVAITEEGVVYTWGWKECV 151
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP----------------PSDKRAGEEVVK 178
P+ V D S G+ ++D + QSA + Q PS+ R EE K
Sbjct: 152 PTGTVIADQSSVGTLERDES--QSASASNQVSPRSHVSSRTSSGAASGPSESRGAEESTK 209
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
RR+ SSA++ ++ S DE + PC+VT N GVKIT VAAGGRHTL LS
Sbjct: 210 RRRLSSAKQGPDSSTSSDENLSAPPCIVTFNTGVKITAVAAGGRHTLALS 259
>gi|242054967|ref|XP_002456629.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
gi|241928604|gb|EES01749.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
Length = 503
Score = 249 bits (635), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 127/236 (53%), Positives = 160/236 (67%), Gaps = 23/236 (9%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL------CGGDSWKDVCGGGCGFALATSESGK 71
KE VV MWGYLPG SP++SP+L P+P RL GD W+DVCGGGCGFA+A SESGK
Sbjct: 32 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAAAAGDGWRDVCGGGCGFAMAISESGK 91
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L+TWGSADD GQSY+T+GKH ETPE FPLP+ ++V+A AGWAHCV++T+ G+VYTWGW+
Sbjct: 92 LLTWGSADDMGQSYVTAGKHEETPEAFPLPSGVAIVRADAGWAHCVAITDEGDVYTWGWK 151
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------------RAGEEV 176
ECVP+ +V D S G+ +KD +Q A+ T+Q P + R ++
Sbjct: 152 ECVPTGRVIGDQSSVGTMEKDE--RQMAMATDQVSPRSQVSRTSSGAASGPPESRGTDDS 209
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSL 232
KRR+ SSA+ E+ S DE + PC+VT N GVKI VAAGGRHTL LS L
Sbjct: 210 TKRRRLSSAKHGPESSTSSDESLSAPPCVVTFNTGVKIVSVAAGGRHTLALSASDL 265
>gi|357125848|ref|XP_003564601.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
2 [Brachypodium distachyon]
Length = 518
Score = 249 bits (635), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 126/249 (50%), Positives = 159/249 (63%), Gaps = 40/249 (16%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKLIT 74
KE VV MWGYLPG SP++SP+L+P+P RL GD+W+DVCGGGCGFA+A SESGKL+T
Sbjct: 32 KEQVVLMWGYLPGVSPQRSPLLAPVPVRLPLAATGDAWRDVCGGGCGFAMAISESGKLLT 91
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WGS DD GQSY+T+GKH ETPE FPLP++ + +A GWAHCV++TE G VYTWGW+ECV
Sbjct: 92 WGSTDDMGQSYVTAGKHEETPEAFPLPSDVVIARADTGWAHCVAITEEGVVYTWGWKECV 151
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQ------------------------------ 164
P+ V D S G+ ++D + QSA + Q
Sbjct: 152 PTGTVIADQSSVGTLERDES--QSASASNQGESFSALILYRYNKGNSIAVSPRSHVSSRT 209
Query: 165 -----APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ PS+ R EE KRR+ SSA++ ++ S DE + PC+VT N GVKIT VAA
Sbjct: 210 SSGAASGPSESRGAEESTKRRRLSSAKQGPDSSTSSDENLSAPPCIVTFNTGVKITAVAA 269
Query: 220 GGRHTLILS 228
GGRHTL LS
Sbjct: 270 GGRHTLALS 278
>gi|413951961|gb|AFW84610.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 588
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 125/232 (53%), Positives = 157/232 (67%), Gaps = 23/232 (9%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL------CGGDSWKDVCGGGCGFALATSESGK 71
KE VV MWGYLPG SP++SP+L P+P RL GD W+DVCGGGCGFA+A SESGK
Sbjct: 119 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPPTAATAAGDGWRDVCGGGCGFAMAISESGK 178
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L+TWGSADD GQSY+T+GKH ETPE FPLP+ +V+A AGWAHCV++T+ +VYTWGW+
Sbjct: 179 LLTWGSADDMGQSYVTAGKHEETPEAFPLPSSVVIVRADAGWAHCVAITDEYDVYTWGWK 238
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEV 176
ECVP+ +V D S G+ +KD +Q A+ T+Q P S+ R ++
Sbjct: 239 ECVPTGRVIGDQSSVGTMEKDE--RQMAMATDQVSPRSQVSRTSSGAAAGSSESRGTDDS 296
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
KRRK S A+ E+ S DE + PC+VT + GVKI VAAGGRHTL LS
Sbjct: 297 TKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALS 348
>gi|413951960|gb|AFW84609.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 552
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 125/232 (53%), Positives = 157/232 (67%), Gaps = 23/232 (9%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL------CGGDSWKDVCGGGCGFALATSESGK 71
KE VV MWGYLPG SP++SP+L P+P RL GD W+DVCGGGCGFA+A SESGK
Sbjct: 119 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPPTAATAAGDGWRDVCGGGCGFAMAISESGK 178
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L+TWGSADD GQSY+T+GKH ETPE FPLP+ +V+A AGWAHCV++T+ +VYTWGW+
Sbjct: 179 LLTWGSADDMGQSYVTAGKHEETPEAFPLPSSVVIVRADAGWAHCVAITDEYDVYTWGWK 238
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEV 176
ECVP+ +V D S G+ +KD +Q A+ T+Q P S+ R ++
Sbjct: 239 ECVPTGRVIGDQSSVGTMEKDE--RQMAMATDQVSPRSQVSRTSSGAAAGSSESRGTDDS 296
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
KRRK S A+ E+ S DE + PC+VT + GVKI VAAGGRHTL LS
Sbjct: 297 TKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALS 348
>gi|222631832|gb|EEE63964.1| hypothetical protein OsJ_18789 [Oryza sativa Japonica Group]
Length = 479
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/231 (51%), Positives = 158/231 (68%), Gaps = 22/231 (9%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL-----CGGDSWKDVCGGGCGFALATSESGKL 72
KE VV MWGYLPG S ++SP+L P+P R+ GD+W+DV GGGCGFA+A SE GKL
Sbjct: 12 KERVVLMWGYLPGVSQQRSPLLGPVPVRMPDAAAAAGDAWRDVAGGGCGFAMAVSEQGKL 71
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
TWGS DD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T G+VYTWGW+E
Sbjct: 72 FTWGSTDDMGQSYVTAGKHEETPEAFPLPSDIAIVRADAGWAHCVAITGKGDVYTWGWKE 131
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------------RAGEEVV 177
CVP+ +V D + G+ D +QS + T+Q P K R+ E+
Sbjct: 132 CVPTGRVIADHSATGAMDCDK--RQSGVATDQVSPRSKVSRTSTKAASGPAESRSSEDST 189
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
KRR+ SS++ +E+ +S DE + PC+VT N GVKI +VAAGGRHTL+LS
Sbjct: 190 KRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLS 240
>gi|218196915|gb|EEC79342.1| hypothetical protein OsI_20201 [Oryza sativa Indica Group]
Length = 484
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 159/236 (67%), Gaps = 27/236 (11%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL-----CGGDSWKDVCGGGCGFALATSESGKL 72
KE VV MWGYLPG S ++SP+L P+P R+ GD+W+DV GGGCGFA+A SE GKL
Sbjct: 12 KERVVLMWGYLPGVSQQRSPLLGPVPVRMPDAAAAAGDAWRDVAGGGCGFAMAVSEQGKL 71
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
TWGS DD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T G+VYTWGW+E
Sbjct: 72 FTWGSTDDMGQSYVTAGKHEETPEAFPLPSDIAIVRADAGWAHCVAITGKGDVYTWGWKE 131
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP--------------------PSDKRA 172
CVP+ +V D + G+ D +QS + T+Q P++ R+
Sbjct: 132 CVPTGRVIADHSATGAMDCDK--RQSGVATDQGNSITVSPRSKVSRTSTKAASGPAESRS 189
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E+ KRR+ SS++ +E+ +S DE + PC+VT N GVKI +VAAGGRHTL+LS
Sbjct: 190 SEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLS 245
>gi|110740523|dbj|BAE98367.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
Length = 488
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/227 (53%), Positives = 151/227 (66%), Gaps = 23/227 (10%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWG 76
+ VVYMWGYLPG SP++SP++SP+ ++ SWKDV GGGCGFA+AT+ESGKLITWG
Sbjct: 30 QRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLITWG 89
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
S DD GQSY+TSGKHGETPEPFPLP E V KA AGWAHCV+VTE +VYTWGWREC+P+
Sbjct: 90 STDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPT 149
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS--------------DKRAGEEVVKRRKT 182
+V R DS + + TEQ S + R G E K+R+
Sbjct: 150 GRVFRQ------VDGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEPTKKRRI 203
Query: 183 SSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
S +++ +EN + D + PCLV+L PGV+I VAAGGRHTL LS
Sbjct: 204 SPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALS 250
>gi|15233306|ref|NP_191117.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|7076801|emb|CAB75916.1| Regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|332645883|gb|AEE79404.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 488
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/227 (53%), Positives = 151/227 (66%), Gaps = 23/227 (10%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWG 76
+ VVYMWGYLPG SP++SP++SP+ ++ SWKDV GGGCGFA+AT+ESGKLITWG
Sbjct: 30 QRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLITWG 89
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
S DD GQSY+TSGKHGETPEPFPLP E V KA AGWAHCV+VTE +VYTWGWREC+P+
Sbjct: 90 STDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPT 149
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS--------------DKRAGEEVVKRRKT 182
+V G DS + + TEQ S + R G E K+R+
Sbjct: 150 GRVF------GQVDGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEPTKKRRI 203
Query: 183 SSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
S +++ +EN + D + PCLV+L PGV+I VAAGGRHTL LS
Sbjct: 204 SPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALS 250
>gi|297816858|ref|XP_002876312.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297322150|gb|EFH52571.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 482
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 155/233 (66%), Gaps = 21/233 (9%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSE 68
E+ E + +VYMWGYLPG S ++SP++SP+ ++ SWKDV GGGCGFA+AT+E
Sbjct: 18 QEEEEVVGQRLVYMWGYLPGASQQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAE 77
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
SGKLITWGS DD GQSY+TSGKHGETPEPFPLP E V KA AGWAHCV+VTE EVYTW
Sbjct: 78 SGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQEVYTW 137
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK------------RAGEEV 176
GWREC+P+ +V FG A DS + + TEQ P+ + A E
Sbjct: 138 GWRECIPTGRV---FGQA---DGDSCERNISFSTEQVSPTCQGRKSSGGTSYQVEARGEP 191
Query: 177 VKRRKTSSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
K+R+ S +++ +EN + D + PCLV+L PGV+I VAAGGRHTL LS
Sbjct: 192 TKKRRISPSKQAAENASQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALS 244
>gi|224112701|ref|XP_002316265.1| predicted protein [Populus trichocarpa]
gi|222865305|gb|EEF02436.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 143/203 (70%), Gaps = 18/203 (8%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ 83
MWGYLPG P++SPI SP+ R +WKDVCGGGCGFA+A SESGKLITWGS DD GQ
Sbjct: 1 MWGYLPGALPQRSPISSPLAVRSTV-YAWKDVCGGGCGFAMAISESGKLITWGSTDDLGQ 59
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
SY+TSGKHGETPE FPLPTEAS+V+AAAGWAHCV+ T+ GEVYTWGW+EC+PS KV D
Sbjct: 60 SYVTSGKHGETPEAFPLPTEASIVEAAAGWAHCVAATDTGEVYTWGWKECIPSGKVFGDP 119
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPS----------------DKR-AGEEVVKRRKTSSAR 186
AG KD+ +Q+ TEQ P D R +G+E KRR+ +SA+
Sbjct: 120 SGAGGSAKDAFERQNLFFTEQVSPRSQGSRSSSGSGTFSGVDGRGSGDESTKRRRIASAK 179
Query: 187 EESENPASGDEFFTLSPCLVTLN 209
+ +E+ ++GDE + PCLVTLN
Sbjct: 180 QAAESSSAGDETLSALPCLVTLN 202
>gi|168016500|ref|XP_001760787.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688147|gb|EDQ74526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 136/213 (63%), Gaps = 6/213 (2%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
MWGYLP SP+++P+L P P + D K VC GGCGF +A SESGKL TWGS + G
Sbjct: 1 MWGYLPAASPQRAPLLQPTPVPVTPLNDPLKTVCNGGCGFGIAISESGKLNTWGSTTELG 60
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q YL SGK E PEP+PLPTE+ +V+AA GWAHC +VT GEV+TWGW ECVPS + T D
Sbjct: 61 QCYLISGKQQELPEPYPLPTESPIVQAAGGWAHCAAVTGGGEVFTWGWSECVPSIQPTPD 120
Query: 143 FGSAGSFQKDSTGKQSALPTEQ---APPSDKRAGEEVVKRRKTSSAR--EESENPASGDE 197
S KQS T + +D + EE++K+RK S E E+P + +E
Sbjct: 121 ESEQVQGDDASACKQSGRQTHRNLTCKTTDSKGAEEILKKRKIVSFEHGESPESPTAAEE 180
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSGK 230
PCLV L+PG++I+ VAAGGRHTL LSG+
Sbjct: 181 NVFAPPCLVNLDPGIRISIVAAGGRHTLALSGE 213
>gi|168002036|ref|XP_001753720.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695127|gb|EDQ81472.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 478
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 140/233 (60%), Gaps = 17/233 (7%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPA-RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V MWGYLP SP+++P+L P P D K VC GGCGF +A SESGKL TWGS +
Sbjct: 17 VRMWGYLPAASPQRAPLLQPTPVPSTPLNDPLKMVCNGGCGFGIAISESGKLNTWGSTTE 76
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
GQ YL SGK E PEP+ LPTE+ +++AA GWAHC +VT GEVYTWGW ECVP+ K
Sbjct: 77 LGQCYLISGKQQEVPEPYSLPTESPIIQAAGGWAHCAAVTGDGEVYTWGWSECVPNIKSN 136
Query: 141 RDFGSAGSFQKDST---GKQSALPTEQ------APPSDKRAGEEVVKRRKTSS--AREES 189
D Q D T G ++L Q S+ + EEV+K+RK S R
Sbjct: 137 PD--ETEQAQGDDTSPSGPNTSLHGRQNHRNLTCKTSESKGAEEVLKKRKVVSFEDRGSP 194
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSLESAEPKRLIF 242
E+P + +E PCLV L+PG++I+ VAAGGRHTL LSG S + LIF
Sbjct: 195 ESPTAAEENVFAPPCLVILDPGIRISTVAAGGRHTLALSGMYSFSYD---LIF 244
>gi|168046566|ref|XP_001775744.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672896|gb|EDQ59427.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 127/220 (57%), Gaps = 22/220 (10%)
Query: 10 ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL-CGGDSWKDVCGGGCGFALATSE 68
EN EC V MWGYLP SP+++P+L P P + D K VC GGCGF +A SE
Sbjct: 7 ENAAAGECS---VRMWGYLPAASPQRTPLLQPTPVPVSVLNDPLKTVCNGGCGFGIAISE 63
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
SG L TWGS D G YL SGK E PE +PLPT++ +V AA GWAHC +VT GEVYTW
Sbjct: 64 SGNLNTWGSTTDHGHCYLISGKQQEVPELYPLPTDSPIVHAAGGWAHCAAVTGDGEVYTW 123
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
GW EC TGKQ+ L + EEV+KRRK + E
Sbjct: 124 GWSECT-----------------KPTGKQT-LRNLACKTTGSDGAEEVIKRRKVITNSAE 165
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
++P + +E PCLV L+PG++I+ VAAGGRHTL LS
Sbjct: 166 GQSPEASEENAFAPPCLVKLDPGIRISSVAAGGRHTLALS 205
>gi|222619534|gb|EEE55666.1| hypothetical protein OsJ_04066 [Oryza sativa Japonica Group]
Length = 418
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 122/180 (67%), Gaps = 17/180 (9%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A SESGKL+TWGSADD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T+ G
Sbjct: 1 MAISESGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSDVAIVRADAGWAHCVAITDEG 60
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP---------------PS 168
+VYTWGW+ECVP+ +V D S G+ +KD +QSA+ +Q PS
Sbjct: 61 DVYTWGWKECVPTGRVISDQSSGGTLEKDE--RQSAIAADQVSPRSQVSRTSSGAASGPS 118
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ R ++ KRR+ SS + E+ S DE + PC+VT N GVKI VAAGGRHTL LS
Sbjct: 119 ESRGTDDSTKRRRLSSTKHAPESSTSSDENLSAPPCVVTFNTGVKIMAVAAGGRHTLALS 178
>gi|218189368|gb|EEC71795.1| hypothetical protein OsI_04422 [Oryza sativa Indica Group]
Length = 427
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 123/183 (67%), Gaps = 17/183 (9%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
G+ A ++SGKL+TWGSADD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T
Sbjct: 7 GWLAAAAQSGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSDVAIVRADAGWAHCVAIT 66
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP-------------- 166
+ G+VYTWGW+ECVP+ +V D S G+ +KD +QSA+ +Q
Sbjct: 67 DEGDVYTWGWKECVPTGRVISDQSSGGTLEKDE--RQSAIAADQVSPRSQVSRTSSGAAS 124
Query: 167 -PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
PS+ R ++ KRR+ SS + E+ S DE + PC+VT N GVKI VAAGGRHTL
Sbjct: 125 GPSESRGTDDSTKRRRLSSTKHAPESSTSSDENLSAPPCVVTFNTGVKIMAVAAGGRHTL 184
Query: 226 ILS 228
LS
Sbjct: 185 ALS 187
>gi|302793045|ref|XP_002978288.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
gi|300154309|gb|EFJ20945.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
Length = 454
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 136/231 (58%), Gaps = 10/231 (4%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGK 71
+++ ++ V MWGYLP +SP++SPI+ P D W+ VC GGCGFALA SESGK
Sbjct: 2 EIQGTRKLGVRMWGYLPASSPQRSPIVVPTKVSPASPDDGWRAVCSGGCGFALALSESGK 61
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L TWGS DD GQ Y SGKH E PEPFPL T ++ AAAGWAHC VTE GEVYTWGW+
Sbjct: 62 LHTWGSTDDLGQCYHISGKHQEHPEPFPLQTPPAIF-AAAGWAHCAVVTETGEVYTWGWK 120
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSAL-----PTEQAPPSDKRAGEEVVKRRKTSSAR 186
ECVPS K + G +G D G+ L + +P A + K+RK S+
Sbjct: 121 ECVPSDKNCVEQGVSGD-PYDYQGRTEELKHVEPDLDSSPGHSPEARLDSSKKRKVSTDE 179
Query: 187 EES-ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSLESAE 236
S ++P +G + ++P P K+ VA GGRHTL L+GK + +
Sbjct: 180 AGSPDSPGAGVDEAVVAPLCCVPMP-AKVILVATGGRHTLALTGKFFHTGQ 229
>gi|168037867|ref|XP_001771424.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677342|gb|EDQ63814.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 465
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 127/221 (57%), Gaps = 19/221 (8%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
MWGYLP SP+++P+L P + D K VC GGCGF + SESGKL TWGS + G
Sbjct: 1 MWGYLPAASPQRTPLLHPTLVPITALDDPLKIVCNGGCGFGIGISESGKLNTWGSTTELG 60
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q YL SGK E PEP+ LPT++ +++AA GWAHC +VT GEVYTWGW ECVPS +
Sbjct: 61 QCYLISGKQQEVPEPYLLPTDSPIIQAAGGWAHCAAVTGNGEVYTWGWSECVPSVTLNAV 120
Query: 143 FGS-------------AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE-- 187
S S Q S +A +E P S EEV+K+RK S +
Sbjct: 121 EESEQVQEDDIPPDVPGTSLQLLSRNNVNAARSEPLPSS---VVEEVLKKRKVVSFEDGG 177
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E+P + DE P LV L+ G++I VAAGGRHTL LS
Sbjct: 178 SPESPTAADENVFSPPFLVNLDAGIRIASVAAGGRHTLALS 218
>gi|302765727|ref|XP_002966284.1| hypothetical protein SELMODRAFT_85679 [Selaginella moellendorffii]
gi|300165704|gb|EFJ32311.1| hypothetical protein SELMODRAFT_85679 [Selaginella moellendorffii]
Length = 453
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 131/225 (58%), Gaps = 16/225 (7%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGK 71
+++ ++ V MWGYLP +SP++SPI+ P D W+ VC GGCGFALA SESGK
Sbjct: 2 EIQGTRKLGVRMWGYLPASSPQRSPIVVPTKVSPASPDDGWRAVCSGGCGFALALSESGK 61
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L TWGS DD GQ Y SGKH E PEPFPL T ++ AAAGWAHC VTE GEVYTWGW+
Sbjct: 62 LHTWGSTDDLGQCYHISGKHQEHPEPFPLQTPPAIF-AAAGWAHCAVVTETGEVYTWGWK 120
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSAL-----PTEQAPPSDKRAGEEVVKRRKTSSAR 186
ECVPS K + G +G D G+ L + +P A + K+RK S+
Sbjct: 121 ECVPSDKNCVEQGVSGD-PYDYQGRTEELKHVEPDLDSSPGHSPEALLDSSKKRKVST-- 177
Query: 187 EESENPASG----DEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+E+ +P S DE C V + K+ VA GGRHT +L
Sbjct: 178 DEAGSPDSSGAGVDEAVVAPLCCVPMP--AKVILVATGGRHTFVL 220
>gi|414879725|tpg|DAA56856.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 431
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 106/192 (55%), Gaps = 47/192 (24%)
Query: 82 GQSYLTSGKH-----------------------------GETPEPFPLPTEASVVKAAAG 112
GQSY+T+GKH ETPE FPLP ++V+A AG
Sbjct: 2 GQSYVTAGKHEVITLMLSCFPAPCEKVQDLLLKIEYYTSQETPEAFPLPRGVAIVRADAG 61
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-------- 164
WAHCV++T+ G+VYTWGW+ECVP+ +V D S G+ +KD +Q A+ T+Q
Sbjct: 62 WAHCVAITDEGDVYTWGWKECVPTGRVIGDQSSVGTKEKDE--RQMAMATDQGVSPRSQV 119
Query: 165 --------APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+ PS+ R ++ KRR+ SSA+ E+ S DE + PC+VT N GVKI
Sbjct: 120 SRTSSGAASGPSESRGTDDSTKRRRLSSAKHGPESSTSSDESLSAPPCVVTFNTGVKIVS 179
Query: 217 VAAGGRHTLILS 228
VAAGGRHTL LS
Sbjct: 180 VAAGGRHTLALS 191
>gi|218189367|gb|EEC71794.1| hypothetical protein OsI_04421 [Oryza sativa Indica Group]
Length = 73
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 3/53 (5%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATS 67
KE VV MWGYLPG SP++SP+L P+P RL GGD W+DVCGGGCGFA+A S
Sbjct: 17 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPAAAGGDGWRDVCGGGCGFAMAIS 69
>gi|336118147|ref|YP_004572915.1| hypothetical protein MLP_24980 [Microlunatus phosphovorus NM-1]
gi|334685927|dbj|BAK35512.1| hypothetical protein MLP_24980 [Microlunatus phosphovorus NM-1]
Length = 463
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 15 EECKETVVYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
+E + T Y+WGY G + + + SP PARL G D+ GG F +A +ESG
Sbjct: 3 KEKQATYAYVWGYNNTGELGVN-HAARVYSPRPARLPAG--IVDLQGG-ANFTIALTESG 58
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+++TWGS ++ GQ S + TP+ LP AAG H V VT G + TWG
Sbjct: 59 RVLTWGS-NEHGQLGDGSRRPRRTPQQVRLPEGHRAAAIAAGTDHVVVVTTRGHLITWG 116
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 37/186 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP------EPFPLPTEASVVKAA-A 111
G G + A + G+L+TWG GQ L + G P +P + V A A
Sbjct: 148 GDGISAAITPGGRLLTWGR---NGQGQLA--QKGSVPVGRDVLKPIHARQVSEPVSAVDA 202
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H V +T G+V +G V A + GK+ ALP
Sbjct: 203 GLRHLVVLTSDGDVLMFG----VDVAGL-------------PLGKKMALPARWGQVRTIV 245
Query: 172 AGEE---VVKRRKTSS--AREESENPASGDEFFTLSPCLVTLNPGVK--ITKVAAGGRHT 224
AGE+ + RR + A+GD LSP +V L+ GV+ +T++ AG RH
Sbjct: 246 AGEDHTLALTRRGVILGWGANDLGQLATGDSAHQLSPVVVKLS-GVRGQVTQIRAGHRHG 304
Query: 225 LILSGK 230
L L+ K
Sbjct: 305 LALTDK 310
>gi|426248720|ref|XP_004018107.1| PREDICTED: RCC1 domain-containing protein 1 [Ovis aries]
Length = 307
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 39/180 (21%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG+ G+HG+ PEP P EA + +
Sbjct: 97 GAEHALLLDAAGQVFSWGA-----------GRHGQLGHGTLEPEPEPRLLEALQGLRMAE 145
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E A T+ G K + G+ S L +
Sbjct: 146 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDG---KTTAGEASGLDED----- 197
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G EV ++ S+ + + P + F P L+ L+PG + KV+ G RHT +L+
Sbjct: 198 ----GSEV---KRVSAGEDGAPAPFIAVQPF---PALLDLSPGSEAVKVSCGSRHTAVLT 247
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 16/91 (17%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFP 99
LCG +DVC CG F+LA S +GK+ TWG D Y G H +P+
Sbjct: 3111 LCG----RDVCRIACGAQFSLALSTTGKVWTWGKGD-----YYRLGHGNDSHYRSPQLIE 3161
Query: 100 LPTEAS-VVKAAAGWAHCVSVTEAGEVYTWG 129
P + + + A G HC++VT+ GEVY+WG
Sbjct: 3162 GPLKKKRITEIAVGALHCLAVTDTGEVYSWG 3192
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F++A +++G L TWG D + T+ H P +V AAG
Sbjct: 4017 VCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTN-DHVRRPRKVACLQGKQIVTVAAG 4075
Query: 113 WAHCVSVTEAGEVYTWG 129
HCV+ T+AGEV+TWG
Sbjct: 4076 SLHCVACTDAGEVFTWG 4092
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + G + TWG +D + T H P+ +V A G +HC++
Sbjct: 679 GSQFSVALGKDGTVWTWGKSDGYRLGHGTL-DHVRYPKMVEGLINYHIVDIAVGPSHCLA 737
Query: 119 VTEAGEVYTWG 129
+T+ +++TWG
Sbjct: 738 LTDNCQIFTWG 748
>gi|260826736|ref|XP_002608321.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
gi|229293672|gb|EEN64331.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
Length = 364
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 48/211 (22%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
+ M G + T+P +P+P L G+ K VC CG +LA + SG++ +WG+
Sbjct: 144 ITMLGDVQSTNP------TPLPVYL--GEKVKAVC---CGKEHSLALTLSGRVFSWGNGS 192
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
GQ + + TP+ ++V AAG H VSV+ G++Y WGW E
Sbjct: 193 -RGQLGHGTTEASNTPQVIEALEGVTMVTIAAGGWHSVSVSAFGDLYVWGWNE------- 244
Query: 140 TRDFGSAGSFQKDSTGKQSALPT--EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
Q LPT + PSD + S + +N A +
Sbjct: 245 ---------------AGQLGLPTSKHKTGPSDHKP--------SISEMGHQGDNVA--EV 279
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+P +V + G +++KV+ G RHT L+
Sbjct: 280 LVQATPTIVDMPAGQEVSKVSCGSRHTAALT 310
>gi|329664574|ref|NP_001192921.1| RCC1 domain-containing protein 1 [Bos taurus]
Length = 377
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG A GQ L G PEP L + A AAG H
Sbjct: 167 GAEHALLLDAAGQVFSWG-AGRHGQ--LGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHS 223
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V ++E G++Y WGW E A T+ G K + G+ S L + G EV
Sbjct: 224 VCLSETGDIYIWGWNESGQLALPTKSLAEDG---KTTAGEASGLEED---------GSEV 271
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
++ S+ + + P + F P L+ L+PG + KV+ G RHT +L+
Sbjct: 272 ---KRGSAGEDGAPAPFIAVQPF---PALLDLSPGSEAVKVSCGSRHTAVLT 317
>gi|296475513|tpg|DAA17628.1| TPA: CG6678-like [Bos taurus]
Length = 377
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG A GQ L G PEP L + A AAG H
Sbjct: 167 GAEHALLLDAAGQVFSWG-AGRHGQ--LGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHS 223
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V ++E G++Y WGW E A T+ G K + G+ S L + G EV
Sbjct: 224 VCLSETGDIYIWGWNESGQLALPTKSLAEDG---KTTAGEASGLEED---------GSEV 271
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
++ S+ + + P + F P L+ L+PG + KV+ G RHT +L+
Sbjct: 272 ---KRGSAGEDGAPAPFIAVQPF---PALLDLSPGSEAVKVSCGSRHTAVLT 317
>gi|345798049|ref|XP_003434392.1| PREDICTED: RCC1 domain-containing protein 1 [Canis lupus
familiaris]
Length = 282
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL E+G++ +WG G+HG+ EP P EA V +
Sbjct: 72 GAEHALLLDEAGQVFSWGQ-----------GRHGQLGHGSLEAEPEPRLLEALQGLPVAE 120
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G++Y WGW E A +R S +D T+ P
Sbjct: 121 VAAGGWHSVCVSETGDIYIWGWNESGQLALPSR------SLAED---------TKTIPRE 165
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E+ + R+T+ + + P + F P L+ L G + K + G RHT +++
Sbjct: 166 ASGLNEDGFEVRRTAKGEDGAPAPFIAIQPF---PALLDLPLGADVVKASCGSRHTAVVT 222
Query: 229 G 229
G
Sbjct: 223 G 223
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP A VVKA+ G H VT GE+YTWGW
Sbjct: 194 QPFPALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGW 232
>gi|294881725|ref|XP_002769466.1| regulator of chromosome condensation, putative [Perkinsus marinus
ATCC 50983]
gi|239872925|gb|EER02184.1| regulator of chromosome condensation, putative [Perkinsus marinus
ATCC 50983]
Length = 576
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
++ V+ WG +P T + S L + L G G ALA +E GK+++WG
Sbjct: 169 DSRVFAWGRMPWTGAQTSQGLEDV---LSLARKRIRSVAIGAGHALALTEGGKVMSWG-L 224
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+D GQ + PE LP++ + K A G + V+VT+AG+++TWG
Sbjct: 225 NDSGQLGTGDERSRIIPETVKLPSDVYIDKIACGPDYSVAVTKAGQLWTWG 275
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGE----TPEPFPLPTEASVVKAAAGW 113
CG LA ++ G++ +WG +D GQ L G HG P +P + AAG
Sbjct: 315 CGDQHMLALTKEGEVFSWGY-NDFGQ--LGWGLHGVDVVGQQRPHKVPHLPKISDIAAGG 371
Query: 114 AHCVSVTEAGEVYTWG 129
H V+V + G VY+WG
Sbjct: 372 GHSVAVGDDGAVYSWG 387
>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 556
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + +G + WG+ + +GQ + TP LP ++ AAG H +++T A
Sbjct: 260 SLALTSTGAALAWGN-NADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAA 318
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G V WG V+ G+ G+ ST LPT A + AG + T
Sbjct: 319 GAVVAWGR-------NVSGQLGN-GTTTGSSTPVDVDLPTG-ATINAIAAGFDFGLALTT 369
Query: 183 SSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ A R S +GD +P V L GV IT VAAGG+H++ L
Sbjct: 370 AGAVVAWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMAL 419
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 17/196 (8%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L G + + G +LA + +G ++ WG + GQ + TP
Sbjct: 131 TPVDVDLPAGTTITAIAAGAF-HSLALTSAGTVLAWGE-NLHGQLGNGGTTNMSTPVGVS 188
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP ++ AAG H ++VT G V WG G+ G+ ST
Sbjct: 189 LPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNS-------NGQLGN-GTTTGSSTPVDVD 240
Query: 160 LP---TEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGV 212
LP T A + + T +A N +GD +P V L GV
Sbjct: 241 LPAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGV 300
Query: 213 KITKVAAGGRHTLILS 228
IT VAAGG H+L L+
Sbjct: 301 TITAVAAGGLHSLALT 316
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L G + V GG +LA + +G ++ WG + GQ + TP
Sbjct: 79 TPVDVYLPAGTTITAVTAGGL-HSLALTSTGAVLAWGR-NFSGQLGNGDTTNRSTPVDVD 136
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
LP ++ AAG H +++T AG V WG
Sbjct: 137 LPAGTTITAIAAGAFHSLALTSAGTVLAWG 166
>gi|294874340|ref|XP_002766907.1| Secretion-regulating guanine nucleotide exchange factor, putative
[Perkinsus marinus ATCC 50983]
gi|239868282|gb|EEQ99624.1| Secretion-regulating guanine nucleotide exchange factor, putative
[Perkinsus marinus ATCC 50983]
Length = 577
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
++ V+ WG +P T + S L + L G G ALA +E GK+++WG
Sbjct: 169 DSRVFAWGRMPWTGAQASQGLEDV---LSLARKRIRSVAIGAGHALALTEGGKVMSWG-L 224
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+D GQ + PE LP++ + K A G + V+VT+AG+++TWG
Sbjct: 225 NDSGQLGTGDERSRIIPETVKLPSDVYIDKIACGPDYSVAVTKAGQLWTWG 275
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGE----TPEPFPLPTEASVVKAAAGW 113
CG LA ++ G++ +WG +D GQ L G HG P +P + AAG
Sbjct: 315 CGDQHMLALTKEGEVFSWGY-NDFGQ--LGWGLHGVDVVGQQRPHKVPHLPKISDIAAGG 371
Query: 114 AHCVSVTEAGEVYTWG 129
H V+V + G VY+WG
Sbjct: 372 GHSVAVGDDGAVYSWG 387
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 190 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGY- 248
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L SG + TP V + A G+AH + +T+ G+VY WG
Sbjct: 249 NGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 299
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 35/203 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 106 PRRLDSLSGKKIACLSYGSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 161
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ ++G ST
Sbjct: 162 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 208
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCL 205
Q +P + + + S A ++ +G+ L +PC
Sbjct: 209 Q-PIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCR 267
Query: 206 VTLNPGVKITKVAAGGRHTLILS 228
+ G+++ +VA G HTL+L+
Sbjct: 268 IAALQGIRVQRVACGYAHTLVLT 290
>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 260
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
PCLVTLNPGVKIT VAAGGRHTL+LS
Sbjct: 2 PCLVTLNPGVKITSVAAGGRHTLVLS 27
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S I PIP R+ G K V CG +A +SG++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTINQPIPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V ++GEVY WG+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 237
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S I PIP R+ G K V CG +A +SG++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTINQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V ++GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 232
>gi|397627901|gb|EJK68660.1| hypothetical protein THAOC_10141, partial [Thalassiosira oceanica]
Length = 447
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 25/112 (22%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--------- 93
P L G D+ + GG F+LA S+ G + WG ++EGQ G GE
Sbjct: 267 PVELIGNDNISQIAGGSA-FSLALSQEGVIYGWGR-NNEGQLGTGMGMSGECQPSLLVPR 324
Query: 94 ---------TPEPFPLPTEA-----SVVKAAAGWAHCVSVTEAGEVYTWGWR 131
E PLP E +VVK +AG AH +VT GE++TWG
Sbjct: 325 VCCCSNSVYAMEALPLPVEGNLEGKTVVKISAGKAHSAAVTSEGELFTWGMN 376
>gi|327288514|ref|XP_003228971.1| PREDICTED: RCC1 domain-containing protein 1-like [Anolis
carolinensis]
Length = 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 80/197 (40%), Gaps = 46/197 (23%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
+ P P+PA LC + + V G L E+G L +WGS GQ L G +
Sbjct: 35 RPPFFHPLPASLC---ARRLVLG--HEHMLLLDEAGTLFSWGSGR-HGQ--LGHGDLEDR 86
Query: 95 PEPFPLPTEASVVK---AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
PEP + V AA GW H +V+EAG++Y WGW E
Sbjct: 87 PEPQAVEALQGVALKEVAAGGW-HSATVSEAGDLYLWGWNES------------------ 127
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA--REESENPASGDEFFTLS--PCLVT 207
Q LP++ A S A R T A R + + P G +F ++ P L+
Sbjct: 128 ----GQLGLPSKAASESQGAA-------RDTDGAGDRAQPQGP-PGADFISIQAFPALLH 175
Query: 208 LNPGVKITKVAAGGRHT 224
L G + K G RHT
Sbjct: 176 LPRGAEALKAGCGSRHT 192
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 32/112 (28%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWG-------------SADDEGQSYLTSGKHGETP 95
G + K+V GG A SE+G L WG +++ +G + T G G+
Sbjct: 97 GVALKEVAAGGWHSA-TVSEAGDLYLWGWNESGQLGLPSKAASESQGAARDTDGA-GDRA 154
Query: 96 EP-------------FP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+P FP LP A +KA G H +VT GE+YTWGW
Sbjct: 155 QPQGPPGADFISIQAFPALLHLPRGAEALKAGCGSRHTAAVTRTGELYTWGW 206
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
RL G D K CG F+LA S G + TWG D + S +H P+ E
Sbjct: 670 RLSGQDVVKIECGAQ--FSLALSRCGLVWTWGKGDYFRLGH-GSDQHVRRPQVVEGLREH 726
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWG 129
VV A G HC++VTE G+V+ WG
Sbjct: 727 KVVDVAVGALHCLAVTEGGQVFAWG 751
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K + CG F+LA S++G + TWG D + S +H P+ VV+ +
Sbjct: 1656 KHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGH-GSDEHVRRPKLIESLRGMKVVEVS 1714
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G HC++ + G+VYTWG
Sbjct: 1715 VGSLHCIAAVDNGDVYTWG 1733
>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
latipes]
Length = 527
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P R+ K V GCG ++A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP +VV+ A G+AH +++T+ G VY WG
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S ALPT ++ TS+A+ +S
Sbjct: 259 -------ANSYGQLGTGNKSNQALPTLINTDKERMVEVAACHTSHTSAAKTQS 304
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
RL G D K CG F+LA S G + TWG D + S +H P+ E
Sbjct: 669 RLSGQDVVKIECGAQ--FSLALSRCGLVWTWGKGDYFRLGH-GSDQHVRRPQVVEGLREH 725
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWG 129
VV A G HC++VTE G+V+ WG
Sbjct: 726 KVVDVAVGALHCLAVTEGGQVFAWG 750
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K + CG F+LA S++G + TWG D + S +H P+ VV+ +
Sbjct: 1655 KHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGH-GSDEHVRRPKLIESLRGMKVVEVS 1713
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G HC++ + G+VYTWG
Sbjct: 1714 VGSLHCIAAVDNGDVYTWG 1732
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 100/248 (40%), Gaps = 49/248 (19%)
Query: 5 GSKREENEKMEECKETVVYMWGY----LPGTSPEKSPI-LSPIPARLCGGDSWKDV-CGG 58
G KR+EN+ + K + WGY PGTS PI L P + S K+V CGG
Sbjct: 43 GGKRQENKLDDFLKGKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGG 102
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
L E G++ T G + +GQ L K G PE + ++ A G +H ++
Sbjct: 103 NHSIFLL--EDGEVYTCG-VNTKGQ--LGHEKEGSKPEQIGALADQHIIHVACGESHSLA 157
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+++ G +++WG GS G +T A+P K+ +E++
Sbjct: 158 LSDQGRLFSWGA-------------GSDGQLGLTTTEDSVAVPR-----LIKKLNQEMI- 198
Query: 179 RRKTSSAREESENPASGDEFFT------------------LSPCLVTLNPGVKITKVAAG 220
+ S A+ +FF SP V G+ + +VAAG
Sbjct: 199 -LQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAG 257
Query: 221 GRHTLILS 228
G H+ LS
Sbjct: 258 GAHSFALS 265
>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 527
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P R+ K V CG ++A +SG++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP SV++ A G+AH +++T+ G VY WG
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQ--SALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG + ALPT ++ A TS+A+ +S
Sbjct: 259 -------ANSYGQLGTGNKCNQALPTLINTDKERMAEVAACHTSHTSAAKTQS 304
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 77/197 (39%), Gaps = 32/197 (16%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTE 103
LCG G G A+AT++ G++ +WG G S L +G HG TP
Sbjct: 71 LCGKKIVSLSYGTGPHVAIATAD-GEVFSWGH---NGYSQLGNGTTNHGLTPALVSTNLL 126
Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V++ A G H +++T GEV+ WG+ ++G ST Q P
Sbjct: 127 GKRVIEVACGSHHTIALTTDGEVFAWGYN-------------NSGQVGSGSTANQPT-PR 172
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREES-----------ENPASGDEFFTLSPCLVTLNPG 211
+ +A + + S A +S G+ +PC + G
Sbjct: 173 RVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQG 232
Query: 212 VKITKVAAGGRHTLILS 228
V + +VA G HTL L+
Sbjct: 233 VSVIQVACGYAHTLALT 249
>gi|410960604|ref|XP_003986879.1| PREDICTED: RCC1 domain-containing protein 1 [Felis catus]
Length = 320
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 70/172 (40%), Gaps = 24/172 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL E+G++ +WG L G EP PL V A AAG H
Sbjct: 111 GAEHALLLDEAGQVFSWGQGR---HGQLGHGTLEAELEPRPLEALQGVPMAEVAAGGWHS 167
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V V+E G++Y WGW E A +R G K + G+ S L K G +V
Sbjct: 168 VCVSETGDIYIWGWNESGQLALPSRSLAEVG---KTAAGEASGL---------KEDGCDV 215
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+T+ P + F P L+ L PG K + G RHT +++
Sbjct: 216 ----RTAEGESGGLAPFIAIQPF---PALLDLPPGTDAVKASCGSRHTAVVT 260
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP VKA+ G H VT GE+YTWGW
Sbjct: 232 QPFPALLDLPPGTDAVKASCGSRHTAVVTRTGELYTWGW 270
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
+L G D + CG F++A ++SG + TWG D+ + T H P+ +
Sbjct: 773 KLMGQDVVRVYCGNQ--FSMALTKSGAVYTWGKGDNYRLGHGTE-DHARHPKQIEALSSK 829
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
V A G HC+++TE GE+Y WG E
Sbjct: 830 KVKDIAIGSLHCMAITEDGELYGWGRNE 857
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 50 DSWKD--VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLP 101
D +D VC CG F+LA ++SG++ TWG D Y G H P+
Sbjct: 3705 DRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGD-----YFRLGHGTDAHVRKPQIVEGL 3759
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+V A G HC++VT++G+V+ WG
Sbjct: 3760 KGKKIVHVAVGALHCLAVTDSGQVFAWG 3787
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV+
Sbjct: 4714 GSQFSVALTKSGSVYTWGKGDYHRLGH-GSDDHVRRPRKVSALQNKKVIDVACGSLHCVA 4772
Query: 119 VTEAGEVYTWG 129
T+ GEV++WG
Sbjct: 4773 CTDTGEVFSWG 4783
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 19/119 (15%)
Query: 22 VYMWG------YLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLIT 74
VY WG G+S +++ +P+ + G DV CG G LA ++SG + +
Sbjct: 692 VYSWGKGNFGRLGHGSSEDQT---TPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYS 748
Query: 75 WGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WG D Y G+ G +TP+ VV+ G +++T++G VYTWG
Sbjct: 749 WGDGD-----YGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWG 802
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + GK+ +WG DD G+ S + + P V A G +H ++T
Sbjct: 3564 SLALTTDGKVFSWGEGDD-GKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSN 3622
Query: 123 GEVYTWGWRE 132
G++YTWG E
Sbjct: 3623 GDLYTWGLGE 3632
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTE 121
LA S G++ +WG +D L G P + + VV AAG AH +T
Sbjct: 4561 LALSAEGEVYSWGEGED---GKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITA 4617
Query: 122 AGEVYTWG 129
GE+YTWG
Sbjct: 4618 NGELYTWG 4625
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLPGTSPEKSPILS-PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY P + PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWG-Y 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L SG + TP V + A G+AH + +T+ G+VY WG
Sbjct: 232 NGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 46/193 (23%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ +++G+ + PT P + G
Sbjct: 162 YHSLVLTSDGEVFAWGY---------------------NNSGQVGSGPTANQPIPRRVTG 200
Query: 174 ---EEVVKR----RKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKIT 215
+VV + S A ++ +G+ L +PC V G+++
Sbjct: 201 CLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQ 260
Query: 216 KVAAGGRHTLILS 228
+VA G HTL+L+
Sbjct: 261 RVACGYAHTLVLT 273
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K V CG ++A E+G++ WG
Sbjct: 154 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGY- 212
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 213 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWG------- 263
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT D+ TS+A+ +S
Sbjct: 264 ---------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQS 309
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 81/213 (38%), Gaps = 32/213 (15%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I LCG G G LAT E G++ TWG S L +G
Sbjct: 60 GTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 115
Query: 90 --KHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
HG P V++ A G H + +T GEVYTWG + ++
Sbjct: 116 TTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNS 162
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL- 201
G ST Q +P + + + S A E+ +G+ L
Sbjct: 163 GQVGSGSTANQ-PIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 221
Query: 202 ------SPCLVTLNPGVKITKVAAGGRHTLILS 228
+PC + G+++ +VA G HTL+L+
Sbjct: 222 SSGNQPTPCRIAALQGIRVQRVACGYAHTLVLT 254
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F+ A S SG++ TWG + GQ L +G+ G P P+P V+ A G HC+++T
Sbjct: 238 FSAAVSLSGRVFTWGR-NKYGQ--LGNGEFGNAFLPQPVPGIEQAVQVACGDHHCIALTR 294
Query: 122 AGEVYTWG 129
GEVYTWG
Sbjct: 295 WGEVYTWG 302
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEASVVKAAAGWAH 115
G G LA ++G L WGS ++ GQ L +G+ G + P A + AAG H
Sbjct: 130 GQGHMLAVVDNGHLAAWGS-NEYGQ--LGTGEVGASAAQPRVLKRIRGAHFARVAAGATH 186
Query: 116 CVSVTEAGEVYTWG 129
+++T +G+VY++G
Sbjct: 187 SLALTSSGQVYSFG 200
>gi|330792530|ref|XP_003284341.1| hypothetical protein DICPUDRAFT_148108 [Dictyostelium purpureum]
gi|325085687|gb|EGC39089.1| hypothetical protein DICPUDRAFT_148108 [Dictyostelium purpureum]
Length = 448
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVV--K 108
D+ GGG + + G L T+GS D G L + K+ TP+P S+
Sbjct: 43 NDIVGGG-SHTMMVANDGDLYTFGSNDCGQLGFKLLENQKYITTPQPVDYFKNNSIKIKN 101
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
+ GW+H ++ G VY+WG +++ F + + +K+ +Q + + +
Sbjct: 102 CSGGWSHSLACDVNGFVYSWGSNS---HSQLGLTFNAIDTTEKEKKPQQLPIKIDSNNNN 158
Query: 169 DKRAGEEVVKR------RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ + EV ++ + +E NP + + F +N +KI V+ G R
Sbjct: 159 NNNSNTEVKRKIVFKKKIINNINKENQFNPININYF---------INEKIKIISVSCGMR 209
Query: 223 HTLILS 228
H+++LS
Sbjct: 210 HSIVLS 215
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K V CG ++A E+G++ WG
Sbjct: 149 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWG------- 258
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT D+ TS+A+ +S
Sbjct: 259 ---------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQS 304
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 81/213 (38%), Gaps = 32/213 (15%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I LCG G G LAT E G++ TWG S L +G
Sbjct: 55 GTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 110
Query: 90 --KHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
HG P V++ A G H + +T GEVYTWG + ++
Sbjct: 111 TTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNS 157
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL- 201
G ST Q +P + + + S A E+ +G+ L
Sbjct: 158 GQVGSGSTANQ-PIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 216
Query: 202 ------SPCLVTLNPGVKITKVAAGGRHTLILS 228
+PC + G+++ +VA G HTL+L+
Sbjct: 217 SSGNQPTPCRIAALQGIRVQRVACGYAHTLVLT 249
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
I RL G D + CG F+LA +++G + TWG D + + T +H P+
Sbjct: 394 IIDRLQGQDIVRVCCG--AQFSLALTKTGHIWTWGKGDSQRLGHGTE-EHIRFPKQLEGL 450
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
VV A G HC+ +TE GEVY WG
Sbjct: 451 RGKKVVDVAVGSMHCLVMTEEGEVYGWG 478
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-NNSGQ--VGSGSTVNQPIPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVKAAAGWA 114
G F+LA S++GK+ TWG D Y G H P+ + +V++ + G
Sbjct: 2905 GAQFSLALSKNGKVWTWGKGD-----YFRLGHGSDSHVRWPQVVEELADKNVIQVSVGAL 2959
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ GEVY WG
Sbjct: 2960 HCIAVTDRGEVYAWG 2974
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAAGWAHCV 117
G F++A + +G + TWG D + S H P+ + V++ A G HCV
Sbjct: 3872 GSQFSVALTAAGVVYTWGKGDYHRLGH-GSEDHVRRPQAVQGALQGKRVIQVAVGSLHCV 3930
Query: 118 SVTEAGEVYTWG 129
+ T++GEV+TWG
Sbjct: 3931 ACTDSGEVFTWG 3942
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA + SG + +WG DD G+ S E P+ + VV A G AH +T +G
Sbjct: 3719 LALTSSGDVFSWGEGDD-GKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASG 3777
Query: 124 EVYTWG 129
E+YTWG
Sbjct: 3778 ELYTWG 3783
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-- 103
L G + CG G L S G + +WG D Y G+ G FP +
Sbjct: 3807 LAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGD-----YGKLGRGGSDGCKFPQKIDSL 3861
Query: 104 --ASVVKAAAGWAHCVSVTEAGEVYTWG 129
A V+K G V++T AG VYTWG
Sbjct: 3862 QNAGVIKVECGSQFSVALTAAGVVYTWG 3889
>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 538
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 91/249 (36%), Gaps = 57/249 (22%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + K+ VY G G S S + LC D CG G LA
Sbjct: 34 NEALLVMKDKSVYGLGNNIAGCLGISDAHSTLYPKKIEVLCDKDIKTFACGSG-PHVLAL 92
Query: 67 SESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEAS------VVKAAAGWAHC 116
+E G++ +WG SY G G TP +PT + +V A G H
Sbjct: 93 TEKGEVYSWGH-----NSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHS 147
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---SDKRAG 173
+++TE GEVY WG C G G S + T Q P + AG
Sbjct: 148 LALTEEGEVYAWGQNNC----------GQVG----------SNISTNQGSPRQVTSNLAG 187
Query: 174 EEVVKRR--KTSSAREESENPAS------------GDEFFTLSPCLVTLNPGVKITKVAA 219
+++V +TSS G+ ++P V GV I KVA
Sbjct: 188 KKIVHISCGQTSSMVVTDNGEVYGWGYNGVGQLGIGNYVNQMTPSRVGSLIGVVIIKVAC 247
Query: 220 GGRHTLILS 228
G HTL LS
Sbjct: 248 GYAHTLALS 256
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-NNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG F+ A ++SG+L TWG +++GQ L + TP+ + ++V G H
Sbjct: 219 GGWAFSAAVTKSGRLYTWG-FNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHIC 277
Query: 118 SVTEAGEVYTWG 129
++T+ GEVY+WG
Sbjct: 278 AITDQGEVYSWG 289
Score = 37.4 bits (85), Expect = 6.4, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 59 GCGFALATSESGKLITWGSADDE----GQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
G +LA S G + +WG + + GQ Y S K +P + + ++K A G
Sbjct: 42 GEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACG 101
Query: 113 WAHCVSVTEAGEVYTWG 129
H +++T+ G+VY WG
Sbjct: 102 NFHSLALTDMGKVYEWG 118
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 117 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-NNSGQ--VGSGSTVNQPIPRR 173
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 174 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 117 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-NNSGQ--VGSGSTVNQPIPRR 173
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 174 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG +
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYS 232
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V +AA G+AH + +T+ G+VY WG
Sbjct: 233 ---GNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWG 282
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 73/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LATSE G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHVVLATSE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ SG+ L +PC V G+++ + A G
Sbjct: 208 VNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYA 267
Query: 223 HTLILS 228
HTL+L+
Sbjct: 268 HTLVLT 273
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 117 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-NNSGQ--VGSGSTVNQPIPRR 173
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 174 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-NNSGQ--VGSGSTVNQPIPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P ++ S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P ++ S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P ++ S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
I +P + G+S + + CG+ + SE GKLITWG +D GQ + S +H +
Sbjct: 698 IKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGR-NDYGQLGIGSKEHKNSA 756
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
+ PLP + + A+ G H + + G V +G + G G+ + +
Sbjct: 757 QFVPLPMSSKIKNASCGCYHSLILMSNGRVMVFG----------RNNKGQLGAGARTLSS 806
Query: 156 KQSALPTEQAPPSDKRAGEEVVK 178
LP PS+ A +EVV+
Sbjct: 807 ADLPLPV----PSNSLANDEVVR 825
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
S +G+L+T+G +D GQ L +H TP+ + V KAA G H V+ T GE
Sbjct: 620 VVSSNGELLTFG-MNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGE 678
Query: 125 VYTWG 129
VY++G
Sbjct: 679 VYSFG 683
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT E+ I +P+ A L G GC LA + G + +WG +D GQ L S
Sbjct: 532 GTFEERVIIATPVRA-LSGIAISMVAAANGCEHMLAVASDGAVFSWG-YNDRGQLGLGST 589
Query: 90 -KHGETPEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
TP L + + AA + H V+ GE+ T+G +C
Sbjct: 590 ISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC 635
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA ++SG++ TWG D + T +H P P V+ A G HC++
Sbjct: 3145 GAQFSLALTKSGEVWTWGKGDYYRLGHGTD-QHVRKPTPIQGLRGKKVIHVAVGALHCLA 3203
Query: 119 VTEAGEVYTWG 129
VT++G+VY WG
Sbjct: 3204 VTDSGQVYAWG 3214
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 40 SPIPARLCGGDSWKDV--CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
SPIP ++ D+ +V G F++A S G L TWG G+ + +H P+
Sbjct: 714 SPIPVQI---DTLVNVSRIYSGSQFSVALSCDGTLYTWGKGHG-GRLGHGNSEHSNVPKL 769
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRD 142
+ A G AHC+++T +GE+Y WG +++ PS V+RD
Sbjct: 770 VRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICPSG-VSRD 816
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + + H P+ ++ A G HCV+
Sbjct: 4190 GSQFSVALTRSGSVYTWGKGDYHRLGH-GNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4248
Query: 119 VTEAGEVYTWG 129
+++GEV+TWG
Sbjct: 4249 CSDSGEVFTWG 4259
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 22/108 (20%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P + PIL+ + K G A+A + GK+ +WG +D GK
Sbjct: 2967 TPRQVPILNQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3011
Query: 92 G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
G E P+ V A G +H ++T +GE+YTWG E
Sbjct: 3012 GHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGE 3059
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 21/89 (23%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVK 108
K VCG CG ++ A + +G+L TWG T G+ HG + + +PT+ +K
Sbjct: 620 KQVCGIYCGASYSAAITIAGELFTWGRG--------TYGRLGHGNSDDKL-VPTQVQALK 670
Query: 109 A--------AAGWAHCVSVTEAGEVYTWG 129
+ +G AH + VT+ G ++ WG
Sbjct: 671 SYKVVDVALGSGDAHSMCVTDNGLLFAWG 699
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 176 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 234
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 235 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 285
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 144 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 200
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 201 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 235
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3165 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGAL 3219
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3220 HCLAVTDAGQVYAWG 3234
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4323 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4381
Query: 119 VTEAGEVYTWG 129
++AGEVYTWG
Sbjct: 4382 CSDAGEVYTWG 4392
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F+LA + G+L +WG A G + G P +V A G HC
Sbjct: 803 AGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHC 862
Query: 117 VSVTEAGEVYTWG 129
++++ AGE++ WG
Sbjct: 863 LALSSAGEIFGWG 875
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE----TPEPFPLP 101
LCG + CG LA +E G + +WG D + G+ G TP
Sbjct: 3100 LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGD-----FGKLGRGGSEGSATPHEIERL 3154
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ VV+ G +++T AGEV+TWG
Sbjct: 3155 SGIGVVQIECGAQFSLALTRAGEVWTWG 3182
>gi|405977937|gb|EKC42361.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 950
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADD 80
V+MWGY G + ILSP L K V GG +LA S SG + WGS D
Sbjct: 234 VFMWGYGKGCGNKNKDILSPEKVPL----KRKVVEVSGGATHSLALSGSGNIYVWGSGLD 289
Query: 81 EGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
S P+ P SVVK AG + ++TE+G ++ WG
Sbjct: 290 GQLGLGNSNTFQSFPKKLKHPELRRSVVKIQAGEYYSTAITESGSLFIWG 339
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3298 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGAL 3352
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3353 HCLAVTDAGQVYAWG 3367
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4452 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4510
Query: 119 VTEAGEVYTWG 129
++AGEVYTWG
Sbjct: 4511 CSDAGEVYTWG 4521
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F+LA + G+L +WG A G + G P +V A G AHC
Sbjct: 779 AGSQFSLALTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHC 838
Query: 117 VSVTEAGEVYTWG 129
++++ GE++ WG
Sbjct: 839 LALSSNGEIFGWG 851
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3314 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGAL 3368
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3369 HCLAVTDAGQVYAWG 3383
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S +H P+ ++ A G HCV+
Sbjct: 4467 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVEHVRRPKKVAALQGKKIISIATGSLHCVA 4525
Query: 119 VTEAGEVYTWG 129
++AGEV+TWG
Sbjct: 4526 CSDAGEVFTWG 4536
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F+LA S G+L +WG A G + G P +V A G AHC
Sbjct: 808 AGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHC 867
Query: 117 VSVTEAGEVYTWG 129
++++ +GE++ WG
Sbjct: 868 LALSSSGEIFGWG 880
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P ++ S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-NNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-NNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA ++SG++ TWG D + T +H P P V+ A G HC++
Sbjct: 3494 GAQFSLALTKSGEVWTWGKGDYYRLGHGTD-QHVRKPTPIQGLRGKKVIHVAVGALHCLA 3552
Query: 119 VTEAGEVYTWG 129
VT++G+VY WG
Sbjct: 3553 VTDSGQVYAWG 3563
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + + H P+ ++ A G HCV+
Sbjct: 4630 GSQFSVALTRSGSVYTWGKGDYHRLGH-GNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4688
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 4689 CSDGGEVFTWG 4699
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A G + +WG + S +H +P+ ++V A G AHC++
Sbjct: 797 GSHFSVALGRDGTVYSWGKGHGGRLGHGHS-EHTASPKAIQALEGKNIVDLAVGLAHCLA 855
Query: 119 VTEAGEVYTWGWRE----CVPSAKVTRD 142
+T +GE+Y WG + C P VTRD
Sbjct: 856 LTASGELYGWGRNDFQQLCPPC--VTRD 881
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 22/108 (20%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P++ PILS + K G A+A + GK+ +WG +D GK
Sbjct: 3316 TPKQVPILSQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3360
Query: 92 G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
G E P+ + A G +H ++T +GE+YTWG E
Sbjct: 3361 GHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGE 3408
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 20/99 (20%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPF 98
IP R+ + + V G CG ++ A + +G+L TWG T G+ G E
Sbjct: 672 IPTRIVAL-AERQVTGVFCGSSYSAAITAAGELYTWGRG--------TYGRLGHGNSEDK 722
Query: 99 PLPTEASVVKA--------AAGWAHCVSVTEAGEVYTWG 129
LPT V+K G AH + VT+ G VY WG
Sbjct: 723 HLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWG 761
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ +WG D++ + T +H P+ VV A
Sbjct: 658 DIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTE-EHVRYPKIMNGLQGKKVVDVAV 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE+GEVY+WG
Sbjct: 717 GSTHCLALTESGEVYSWG 734
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4218 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4276
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4277 CTEDGEVYTWG 4287
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G L+ +E+G++ +WG D Y G+ G +TP+ + +VK
Sbjct: 610 CGSGDAQTLSVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 664
Query: 112 GWAHCVSVTEAGEVYTWG 129
G +++T+ G+VY+WG
Sbjct: 665 GSQFSIAITKDGQVYSWG 682
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4065 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHS 4116
Query: 117 VSVTEAGEVYTWG 129
+T AGE+YTWG
Sbjct: 4117 ACITAAGELYTWG 4129
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 243 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGY- 301
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L S + TP V + A G+AH + +T+ G+VY WG
Sbjct: 302 NGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWG 352
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 176 GSGPHVILATTE-GEIFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 231
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG + ++G ST Q +P +
Sbjct: 232 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTANQ-PIPRRVTGCLQNKVV 277
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ +G+ L +PC + G+ + +VA G
Sbjct: 278 VNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYA 337
Query: 223 HTLILS 228
HTL+L+
Sbjct: 338 HTLVLT 343
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3348 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGAL 3402
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3403 HCLAVTDAGQVYAWG 3417
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4489 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4547
Query: 119 VTEAGEVYTWG 129
+++GEVYTWG
Sbjct: 4548 CSDSGEVYTWG 4558
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYL-TSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G F++A + G+L +WG A G + S + P +V A G AHC
Sbjct: 782 AGAQFSMALTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHC 841
Query: 117 VSVTEAGEVYTWG 129
++++ GEV+ WG
Sbjct: 842 LALSSCGEVFGWG 854
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 74/201 (36%), Gaps = 31/201 (15%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P ++ D GC ++ A + SG L TWG +Y G +P P
Sbjct: 662 VPTKITLLDRCVKAVFCGCSYSAAITCSGNLYTWGRG-----TYARLGHGNSDDQPLPTV 716
Query: 102 ----TEASVVKAA--AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
TE ++ A +G AH + +T G VY WG D+G G+ + G
Sbjct: 717 VMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWG----------DADYGKLGN--GNLNG 764
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--GDEFFTLS------PCLVT 207
S + E P + T+ + S AS G + S P L++
Sbjct: 765 SMSPVLVESLPKVQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLIS 824
Query: 208 LNPGVKITKVAAGGRHTLILS 228
+I VA G H L LS
Sbjct: 825 GLQHKRIVDVAVGVAHCLALS 845
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 22 VYMWG---YLPGTSPEKSPILSP-IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
+Y WG Y + S L P + A L G + CG LA +E G + +WG
Sbjct: 3255 LYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3314
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ + +TP + V++ G +++T AGEV+TWG
Sbjct: 3315 GD-FGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWG 3365
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 558
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 17/175 (9%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET--PEPFPLPTEASVVKAAAGWAHC 116
G ++LA + +G + WG + GQ L +G + ++ P LP ++ AAG+ H
Sbjct: 254 GSSYSLAITSTGTALAWG-GNSNGQ--LGTGNNADSLIPIAVALPPGTTITSIAAGFTHS 310
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
++VT G WG R G+ T LP + ++
Sbjct: 311 LAVTSTGTALAWGGNS--------RGQLGIGTTTNSDTPVIVNLPPDTTITTNDGGFFHS 362
Query: 177 VKRRKTSSAREESEN----PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ T +A N +G+ +L P V L G KIT +AAGG H+L L
Sbjct: 363 LGSMSTGAALAWGNNFSGQLGTGNNTNSLDPIAVALPSGTKITTIAAGGGHSLAL 417
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 13/183 (7%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
D+ GG +LA + +G ++ WG ++ GQ + + P LP + +VV
Sbjct: 89 DTTVTAVAGGDSHSLALTSAGAVLAWGE-NNFGQLGTGNNLNSSVPITVALPPDTTVVAI 147
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
AA H +++T AG V WG A G+ +F + T LP +
Sbjct: 148 AASHGHSLALTSAGAVLAWG-------ANNVGQLGNGNTFNSN-TPVTVNLPPGTTVATI 199
Query: 170 KRAGEEVVKRRKTSSARE----ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+ T +A + + +L P VTL P IT +AAG ++L
Sbjct: 200 AAGTNHSLAITSTGAALAWGGNGNGQLGNNSTATSLEPIAVTLPPSTTITAIAAGSSYSL 259
Query: 226 ILS 228
++
Sbjct: 260 AIT 262
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 25/170 (14%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
S ++ WG A++ GQ S P LP + +V A G +H +++T AG V W
Sbjct: 56 SDTILAWG-ANNVGQLGDGSTIARNAPVAVSLPPDTTVTAVAGGDSHSLALTSAGAVLAW 114
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-------GEEVVKRRK 181
G +FG G+ S++P A P D G +
Sbjct: 115 G----------ENNFGQLGTGNN----LNSSVPITVALPPDTTVVAIAASHGHSLALTSA 160
Query: 182 TSSAREESENPA---SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + N +G+ F + +P V L PG + +AAG H+L ++
Sbjct: 161 GAVLAWGANNVGQLGNGNTFNSNTPVTVNLPPGTTVATIAAGTNHSLAIT 210
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 26/177 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWG------- 282
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
A S+ + TG +S + PT + D+ TS+A+ + N
Sbjct: 283 ---------ANSYGQLGTGNKSNQSYPTPISVEKDRIIEIAACHSTHTSAAKTQGGN 330
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +A
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKAV 207
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ +G+ L +PC V G+ + +VA G
Sbjct: 208 VNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYA 267
Query: 223 HTLILS 228
HTL+L+
Sbjct: 268 HTLVLT 273
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P R+ K V CG ++A ++G++ WG
Sbjct: 158 VYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGY- 216
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP ++V+ A G+AH +++T+ G VY WG
Sbjct: 217 NCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWG--------- 267
Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S ALPT ++ TS+A+ +S
Sbjct: 268 -------ANSYGQLGTGNKSNQALPTPINTDKERIVEVAACHTSHTSAAKTQS 313
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 30/196 (15%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTE 103
LCG G G +AT++ G++ WG G S L +G HG TP
Sbjct: 80 LCGKKIVSLSYGTGPHVVIATAD-GEVYAWGH---NGYSQLGNGTTNHGLTPALVSTNLL 135
Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ V + A G H +++T GEVY WG+ ++G ST Q
Sbjct: 136 SKRVTEVACGSHHTIALTTDGEVYAWGYN-------------NSGQVGSGSTANQPTPRR 182
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGV 212
+ +K + + + + E G+ +PC + GV
Sbjct: 183 VSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV 242
Query: 213 KITKVAAGGRHTLILS 228
I +VA G HTL L+
Sbjct: 243 NIVQVACGYAHTLALT 258
>gi|340939343|gb|EGS19965.1| putative regulator of chromosome condensation protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 623
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 22 VYMWGYL--------PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
VY WG G E S ++ P G D+ GG +LA +E GKL+
Sbjct: 443 VYGWGLNNYAELGIEDGVGQEGSYLMRPQLIEALAGYKIVDIAGGEH-HSLACTEDGKLL 501
Query: 74 TWGSADDE--GQSYLTSGKHG----ETPEP----FP--LPTEASVVKAAAGWAHCVSVTE 121
TWG D GQ + + E +P FP +P VVK AAG H +VT+
Sbjct: 502 TWGRIDGHQVGQPSESFSEDNTVWDERQKPRILIFPTVVPNIEGVVKVAAGTDHSFAVTK 561
Query: 122 AGEVYTWGWRECVPSAKVTRD 142
G+VY+WG+ + + T D
Sbjct: 562 DGKVYSWGFSANYQTGQGTTD 582
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+G L S P+ + A G K V GG A A +E+G++ TWG + GQ
Sbjct: 220 FGRLGHNSERNQPVARFVEA--LAGKRVKQVACGGFHTA-AVTETGEVYTWGGGE-HGQL 275
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P E VV+ GW+H V++T+ GEVYTWG
Sbjct: 276 GHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWG 320
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +WG +D GQ L P P E +V+ A G H V +T+ GEVYTWG
Sbjct: 3 VYSWGRGED-GQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWG 59
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 22 VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF-ALATSESGKLITWG 76
VY WG + G + P P G + + CGF A SE G++ T+G
Sbjct: 159 VYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKNIVQISA--CGFHTAALSEFGEVFTFG 216
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
EG+ + G + E +P EA V + A G H +VTE GEVYTWG
Sbjct: 217 ----EGK-FGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWG 268
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 17/117 (14%)
Query: 22 VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
VY WG L TS + P+ PI A L + CG G L ++ G++ T
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPV--PIDA-LAERRIVQIACGSGHTVVL--TDEGEVYT 57
Query: 75 WGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WG DD L G +G P ++ + G H +VT +G++YTWG
Sbjct: 58 WGRGDD---GRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWG 111
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+G L S P+ I A + G K V GG A A +ESG + TWG + GQ
Sbjct: 220 FGRLGHNSERNQPVAKCIDALI--GKRIKQVACGGFHTA-AVTESGHVFTWGGGE-HGQL 275
Query: 85 YLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
G + + P E+ ++++ GW+H V++T+ GEV+TWG
Sbjct: 276 ----GHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWG 320
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 49/117 (41%), Gaps = 17/117 (14%)
Query: 22 VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
VY WG L TS + PIL L + + CG G L ++ GK+ T
Sbjct: 3 VYTWGRGEDGQLGLGDTSDQYHPILVE---ALQDRQTVQISCGSGHTVVL--TDDGKVYT 57
Query: 75 WGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WG DD L G +G P + V + G H +VT +GE+YTWG
Sbjct: 58 WGRGDD---GRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWG 111
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 60 CGF-ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK----AAAGWA 114
CGF A SE+G++ T+G EG+ + G + E +P +A + K A G
Sbjct: 199 CGFHTAALSENGQVFTFG----EGK-FGRLGHNSERNQPVAKCIDALIGKRIKQVACGGF 253
Query: 115 HCVSVTEAGEVYTWG 129
H +VTE+G V+TWG
Sbjct: 254 HTAAVTESGHVFTWG 268
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3280 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 3334
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3335 HCLAVTDAGQVYAWG 3349
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4399 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4457
Query: 119 VTEAGEVYTWG 129
++AGEVYTWG
Sbjct: 4458 CSDAGEVYTWG 4468
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G ++A + G L +WG A G + G P +V A G AHC
Sbjct: 777 AGAQSSMALTTEGHLYSWGKASCLGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHC 836
Query: 117 VSVTEAGEVYTWG 129
+++T GEV+ WG
Sbjct: 837 LALTSCGEVFGWG 849
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 166 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGY- 224
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 225 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 275
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 79/203 (38%), Gaps = 35/203 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P+
Sbjct: 82 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNAGLVPYH 137
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ ++G ST
Sbjct: 138 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 184
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCL 205
Q +P + + + S A + +G+ L +PC
Sbjct: 185 Q-PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCR 243
Query: 206 VTLNPGVKITKVAAGGRHTLILS 228
V G+++ +VA G HTL+L+
Sbjct: 244 VAALQGIRVQRVACGYAHTLVLT 266
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3236 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 3290
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3291 HCLAVTDAGQVYAWG 3305
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4298 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4356
Query: 119 VTEAGEVYTWG 129
+++GEVYTWG
Sbjct: 4357 CSDSGEVYTWG 4367
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F+LA S G+L +WG A G + G P +V A AHC
Sbjct: 776 AGSQFSLALSSEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 835
Query: 117 VSVTEAGEVYTWG 129
++++ +GEV+ WG
Sbjct: 836 LALSSSGEVFGWG 848
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3239 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 3293
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3294 HCLAVTDAGQVYAWG 3308
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4302 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4360
Query: 119 VTEAGEVYTWG 129
+++GEVYTWG
Sbjct: 4361 CSDSGEVYTWG 4371
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F++A S G+L TWG A G + G P +V A AHC
Sbjct: 779 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 838
Query: 117 VSVTEAGEVYTWG 129
++++ +GEV+ WG
Sbjct: 839 LALSSSGEVFGWG 851
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P+ + T S V++ A G
Sbjct: 82 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 183
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A + +G+ L +PC V G+++ +VA G
Sbjct: 184 VNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYA 243
Query: 223 HTLILS 228
HTL+L+
Sbjct: 244 HTLVLT 249
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 2085 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 2139
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 2140 HCLAVTDAGQVYAWG 2154
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TW D + S H P+ ++ A G HCV+
Sbjct: 3230 GSQFSVALTKSGAVYTWSKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 3288
Query: 119 VTEAGEVYTWG 129
+++GEVYTWG
Sbjct: 3289 CSDSGEVYTWG 3299
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 22 VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
+Y WG G + + + A L G + CG LA +E G + +WG
Sbjct: 1992 LYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGD 2051
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ + +TP + V++ G +++T AGEV+TWG
Sbjct: 2052 GD-FGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWG 2102
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P+ + T S V++ A G
Sbjct: 82 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQSKVV 183
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A + +G+ L +PC V G+++ +VA G
Sbjct: 184 VNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYA 243
Query: 223 HTLILS 228
HTL+L+
Sbjct: 244 HTLVLT 249
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 2894 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 2948
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 2949 HCLAVTDAGQVYAWG 2963
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F++A S G+L TWG A G + G P +V A AHC
Sbjct: 433 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 492
Query: 117 VSVTEAGEVYTWG 129
++++ +GEV+ WG
Sbjct: 493 LALSSSGEVFGWG 505
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + P P R+ G K V CG +A +SG++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPTPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V ++GEVY WG+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 237
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K + CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVI 207
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ +G+ L +PC + G+++ +VA G
Sbjct: 208 VTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYA 267
Query: 223 HTLILS 228
HTL+L+
Sbjct: 268 HTLVLT 273
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + P P R+ G K V CG +A +SG++ WG
Sbjct: 199 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 257
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 258 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 308
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 167 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPTPRR 223
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V ++GEVY WG+
Sbjct: 224 VTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 258
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K V CG ++A E+G++ WG
Sbjct: 189 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY- 247
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G AH + +T+ G++Y WG
Sbjct: 248 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG------- 298
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT D+ TS+A+ +S
Sbjct: 299 ---------ANSYGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQS 344
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 32/197 (16%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
LCG G G LAT E G++ TWG S L +G P + T
Sbjct: 111 LCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNGTTNHGLVPCQVSTNLV 166
Query: 105 --SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V++ A G H + +T GEVYTWG + ++G ST Q +P
Sbjct: 167 NKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNSGQVGSGSTANQ-PIPR 212
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPG 211
+ + + S A E+ +G+ L +PC + G
Sbjct: 213 RVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 272
Query: 212 VKITKVAAGGRHTLILS 228
+++ +VA G HTL+L+
Sbjct: 273 IRVQRVACGCAHTLVLT 289
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 82 GSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 183
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ +G+ L +PC V+ G+++ +VA G
Sbjct: 184 VNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYA 243
Query: 223 HTLILS 228
HTL+L+
Sbjct: 244 HTLVLT 249
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ +G+ L +PC V G+++ +VA G
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYA 267
Query: 223 HTLILS 228
HTL+L+
Sbjct: 268 HTLVLT 273
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V + A G
Sbjct: 106 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A + +G+ L +PC ++ G+++ +VA G
Sbjct: 208 VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYA 267
Query: 223 HTLILS 228
HTL+L+
Sbjct: 268 HTLVLT 273
>gi|255085030|ref|XP_002504946.1| predicted protein [Micromonas sp. RCC299]
gi|226520215|gb|ACO66204.1| predicted protein [Micromonas sp. RCC299]
Length = 526
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 18/150 (12%)
Query: 22 VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
V+ WG G + +P + P R+ +D+ GG F +A G +I+WG
Sbjct: 357 VHAWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRVRDLAAGG-NFNVAVGADGSMISWG- 414
Query: 78 ADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
A+ G+ L ++ K G+ P P AS A+AGW H + + G ++TWGW V
Sbjct: 415 ANGNGELGLGNSNDKRGDVPRLVHNPNAASFASASAGWRHAAATSSDGRLWTWGWSGSVG 474
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V DSTG Q L Q+
Sbjct: 475 QHGV----------DADSTGGQLGLRNGQS 494
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 17/78 (21%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP------------TEASVVKAAA 111
+ +E G+L WG +D Q L SG P PLP +V+ AA
Sbjct: 224 VCVTEGGELWAWGR-NDASQCGLGSG----APSVVPLPAWISSASPGAPGNHGAVMSVAA 278
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H ++VT+ G VYTWG
Sbjct: 279 GPRHNLAVTDRGAVYTWG 296
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 985 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 1039
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 1040 HCLAVTDAGQVYAWG 1054
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 2050 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 2108
Query: 119 VTEAGEVYTWG 129
+++GEVYTWG
Sbjct: 2109 CSDSGEVYTWG 2119
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG-Y 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L S + TP V + A G+AH + +T+ G+VY WG
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA +++G++ TWG D + T +H P P V+ A G HC++
Sbjct: 3281 GAQFSLALTKAGEVWTWGKGDYYRLGHGTD-QHVRKPTPIQGLRGKKVIHVAVGALHCLA 3339
Query: 119 VTEAGEVYTWG 129
VT++G+VY WG
Sbjct: 3340 VTDSGQVYAWG 3350
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + + H P+ ++ A G HCV+
Sbjct: 4342 GSQFSVALTRSGSVYTWGKGDYHRLGH-GNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4400
Query: 119 VTEAGEVYTWG 129
++AGEV+TWG
Sbjct: 4401 CSDAGEVFTWG 4411
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + G + TWG G+ + +H P+ +V A G AHC++
Sbjct: 775 GSQFSVALTREGTVYTWGKGHG-GRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLA 833
Query: 119 VTEAGEVYTWG---WRECVPSAKVTRD 142
+T +GE+Y WG +++ P VTRD
Sbjct: 834 LTASGELYGWGRNDFQQICPEC-VTRD 859
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 22/108 (20%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P++ PILS + K G A+A + GK+ +WG +D GK
Sbjct: 3103 TPKQVPILSQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3147
Query: 92 G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
G E P+ + A G +H ++T +GE+YTWG E
Sbjct: 3148 GHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGE 3195
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 17/80 (21%)
Query: 59 GCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGE-------TPEPFPLPTEASVVKA 109
GCG A L +E+G WG D GK G P LP + VVK
Sbjct: 721 GCGDAHSLCVTEAGLAFAWGDGD--------FGKLGNESCVGTSVPVQVDLPQASCVVKV 772
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
+G V++T G VYTWG
Sbjct: 773 FSGSQFSVALTREGTVYTWG 792
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 21/89 (23%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVK 108
+ V G CG ++ A + SG+L TWG T G+ HG + + + +PT + +K
Sbjct: 661 RQVTGVFCGSSYSAAITASGELYTWGRG--------TYGRLGHGNSEDKY-VPTLVTALK 711
Query: 109 A--------AAGWAHCVSVTEAGEVYTWG 129
A G AH + VTEAG + WG
Sbjct: 712 AHRVVHVALGCGDAHSLCVTEAGLAFAWG 740
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP+P ++ G S + G F++A S G L +WG G+ + +H P+
Sbjct: 723 SPLPVQIEGVSSVARIYSGS-QFSVALSYDGTLYSWGKGHG-GRLGHGNSEHSNVPKLVH 780
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRD 142
+V A G AHC+++T +GE+Y WG +++ PS V+RD
Sbjct: 781 ALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQICPSG-VSRD 825
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA ++ G++ TWG D + T +H P P V+ A G HC++
Sbjct: 3160 GAQFSLALTKIGEVWTWGKGDYYRLGHGTD-QHVRKPTPIQGLRGKKVIHVAVGALHCLA 3218
Query: 119 VTEAGEVYTWG 129
VT++G+V+ WG
Sbjct: 3219 VTDSGQVFAWG 3229
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + + H P+ ++ A G HCV+
Sbjct: 4176 GSQFSVALTRSGSVYTWGKGDYHRLGH-GNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4234
Query: 119 VTEAGEVYTWG 129
+++GEV+TWG
Sbjct: 4235 CSDSGEVFTWG 4245
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 22/108 (20%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P + PIL+ + K G A+A + GK+ +WG +D GK
Sbjct: 2982 TPRQVPILNQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3026
Query: 92 G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
G E P+ + A G +H ++T +GE+YTWG E
Sbjct: 3027 GHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGE 3074
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 19/82 (23%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVKA------ 109
G ++ A S G+L TWG T G+ HG + + F +PT+ +KA
Sbjct: 636 AGASYSAAVSSVGELFTWGRG--------TYGRLGHGNSDDKF-VPTQVQALKAYKVVDV 686
Query: 110 --AAGWAHCVSVTEAGEVYTWG 129
+G AH ++VT+ G ++ WG
Sbjct: 687 ALGSGDAHSMAVTDGGLLFAWG 708
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V + A G
Sbjct: 82 GSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 183
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A + +G+ L +PC ++ G+++ +VA G
Sbjct: 184 VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYA 243
Query: 223 HTLILS 228
HTL+L+
Sbjct: 244 HTLVLT 249
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA ++ G++ TWG D + S +H P +E +V A G
Sbjct: 3232 VCMIECGAQFSLALTKFGQVYTWGKGDYFRLGH-GSDQHVRKPTLVESLSEKKIVHVAVG 3290
Query: 113 WAHCVSVTEAGEVYTWG 129
HC+ T+ G+VY WG
Sbjct: 3291 ALHCLCATDQGQVYAWG 3307
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + S +H P+ ++ A G HCV+
Sbjct: 4221 GSQFSVALTRSGSVYTWGKGDYHRLGH-GSDEHVRHPKKIAALQGKKIICIATGSLHCVA 4279
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 4280 CSDLGEVFTWG 4290
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA ++SG + TWG D+ + S H P+ + K A G H ++
Sbjct: 687 GSQFSLALTKSGSVYTWGKGDNHRLGH-GSENHVRFPKLVEGLNGKCIKKVAVGSGHVLA 745
Query: 119 VTEAGEVYTWG 129
+T+ GEVY WG
Sbjct: 746 LTDDGEVYGWG 756
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAA 111
K G LA S GK+ +WG DD + K+G + P+ +V A
Sbjct: 4057 KVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGH--GNKNGCDHPQLIDALQGKEIVDIAC 4114
Query: 112 GWAHCVSVTEAGEVYTWG 129
G AH +VT GE+YTWG
Sbjct: 4115 GGAHSAAVTAGGEIYTWG 4132
>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
rubripes]
Length = 527
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P R+ K V CG ++A +SG++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP +V++ A G+AH +++T+ G VY+WG
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+G G+ K + + + TE+ S+ A TS+A+ +S
Sbjct: 259 -ANSYGQLGTGNKCNQAVPTLINTEKERMSEVAA----CHTSHTSAAKTQS 304
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 76/197 (38%), Gaps = 32/197 (16%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTE 103
LCG G G A+AT++ G++ +WG G S L +G HG TP
Sbjct: 71 LCGKKIVSLSYGTGPHVAIATAD-GEVFSWGH---NGYSQLGNGTSTHGLTPALVSTNLL 126
Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V++ A G H +++T GEV+ WG+ ++G ST Q P
Sbjct: 127 GKRVIEVACGSHHTIALTTDGEVFAWGYN-------------NSGQVGSGSTANQPT-PR 172
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREES-----------ENPASGDEFFTLSPCLVTLNPG 211
+ + + + S A +S G+ +PC + G
Sbjct: 173 RVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQG 232
Query: 212 VKITKVAAGGRHTLILS 228
V + +VA G HT+ L+
Sbjct: 233 VNVIQVACGYAHTIALT 249
>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
Length = 371
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS- 88
GT ++S +LSP+ ++ G G F++ +ESG++ T+GS DD GQ L
Sbjct: 162 GTGSQES-VLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGS-DDYGQLGLGQF 219
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
++ TP+ + +V AAG H +VT G++YTWG+
Sbjct: 220 ARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGY 261
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu
rubripes]
Length = 4822
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ VV A
Sbjct: 644 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRFPKLLDTLQGKKVVDVAV 702
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++T+ GEV++WG
Sbjct: 703 GSTHCLALTDDGEVHSWG 720
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3193 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQMVEGLRGKKIVH 3247
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+ G+VY WG
Sbjct: 3248 VAVGALHCLAVTDTGQVYAWG 3268
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4193 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4251
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4252 CTEDGEVYTWG 4262
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G LA +E+G++ +WG D Y G+ G +TP+ + +VK
Sbjct: 596 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 650
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T+ G+VYTWG
Sbjct: 651 GSQFSVALTKDGQVYTWG 668
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3020 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3078
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+Y+WG E
Sbjct: 3079 IEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3113
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAA 110
K G LA S G++ +WG A+D L G P + + VV A
Sbjct: 4029 KVAVNSGGKHCLALSSEGEVYSWGEAED---GKLGHGNRSPCDRPRVIESLRGVEVVDIA 4085
Query: 111 AGWAHCVSVTEAGEVYTWG 129
AG AH +T +GE++TWG
Sbjct: 4086 AGGAHSACITASGELFTWG 4104
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 258
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 82 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 183
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ +G+ L +PC V G+++ +VA G
Sbjct: 184 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYA 243
Query: 223 HTLILS 228
HTL+L+
Sbjct: 244 HTLVLT 249
>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 566
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SV 106
KDV G CG A A + +G L TWG+ GQ L G E PL A V
Sbjct: 178 KDVRGIACGAAHTAAWNGAGVLYTWGA----GQGRL--GHDHERDRFIPLEVSALGGKKV 231
Query: 107 VKAAAGWAHCVSVTEAGEVYTWG 129
V+AA G+AH ++T+AG VYTWG
Sbjct: 232 VQAACGYAHTAAITDAGRVYTWG 254
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K V CG ++A E+G++ WG
Sbjct: 190 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY- 248
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G AH + +T+ G++Y WG
Sbjct: 249 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG------- 299
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT D+ TS+A+ +S
Sbjct: 300 ---------ANSYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQS 345
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 81/213 (38%), Gaps = 32/213 (15%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I LCG G G LAT E G++ TWG S L +G
Sbjct: 96 GTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 151
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
P + T V++ A G H + +T GEVYTWG + ++
Sbjct: 152 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNS 198
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL- 201
G ST Q +P + + + S A E+ +G+ L
Sbjct: 199 GQVGSGSTANQ-PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 257
Query: 202 ------SPCLVTLNPGVKITKVAAGGRHTLILS 228
+PC + G+++ +VA G HTL+L+
Sbjct: 258 SSGNQPTPCRIAALQGIRVQRVACGCAHTLVLT 290
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 182 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 240
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 241 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 291
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 115 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 170
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 171 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 216
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ +G+ L +PC V G+++ +VA G
Sbjct: 217 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYA 276
Query: 223 HTLILS 228
HTL+L+
Sbjct: 277 HTLVLT 282
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ +G+ L +PC V G+++ +VA G
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYA 267
Query: 223 HTLILS 228
HTL+L+
Sbjct: 268 HTLVLT 273
>gi|342181804|emb|CCC91283.1| putative regulator of chromosome condensation [Trypanosoma
congolense IL3000]
Length = 1149
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 52 WKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK- 108
++DVC CGF A+A SG L +WG + GQ L G E E P E SVVK
Sbjct: 804 FEDVCAVDCGFSFAIAIGSSGALYSWG-WNTHGQ--LGHGLAVELGESVFTPKEISVVKT 860
Query: 109 ------AAAGWAHCVSVTEAGEVYTWG 129
A G V++T+ GEVYTWG
Sbjct: 861 LSQVIQVACGGTFVVALTQCGEVYTWG 887
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 2432 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 2486
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 2487 VAVGALHCLAVTDAGQVYAWG 2507
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3279 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3330
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 3331 ACVTAAGDLYTWG 3343
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2259 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2317
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 2318 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2352
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3432 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3490
Query: 119 VTEAGEVYTWG 129
TE G YTWG
Sbjct: 3491 CTEDGS-YTWG 3500
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3185 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3239
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 3240 VAVGALHCLAVTDAGQVYAWG 3260
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4185 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4243
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4244 CTEDGEVYTWG 4254
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 636 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 694
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 695 GSTHCLALTEDSEVHSWG 712
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 571 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 625
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 626 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 660
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4032 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4086
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4087 TAAGDLYTWG 4096
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3012 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3070
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3071 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3105
>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
vitripennis]
Length = 533
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 87/226 (38%), Gaps = 17/226 (7%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + K+ VY G GT S + LCG K G LA
Sbjct: 34 NEALIVTKDGDVYALGSNTAGCLGTGDSHSTLHPKKVEALCG-KGIKTFAYGSGPHVLAL 92
Query: 67 SESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
+ G++ +WG G L +G G TP E V A G H V++TE GE
Sbjct: 93 TNKGEIYSWG---HNGYCELGNGSTNQGLTPTLCLNLNEKVVTAIACGSHHSVALTEDGE 149
Query: 125 VYTWGWREC-VPSAKVTRDFGSAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKT 182
VY+WG C S+ ++ + G+ TGK ++ Q EV
Sbjct: 150 VYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKVVVSIACGQTSSMAVTDVGEVFGWGYN 209
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ G+ LSPC VT G+ I KVA G HTL LS
Sbjct: 210 GVGQ-----LGIGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLALS 250
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWG 3283
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4267 CTEDGEVYTWG 4277
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4055 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4107 ACVTAAGDLYTWG 4119
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWG 3283
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4267 CTEDGEVYTWG 4277
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4055 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4109
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4110 TAAGDLYTWG 4119
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3206 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3260
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 3261 VAVGALHCLAVTDAGQVYAWG 3281
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4206 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4264
Query: 119 VTEAGEVYTWG 129
+E GEVYTWG
Sbjct: 4265 CSEDGEVYTWG 4275
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G V++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4053 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACV 4107
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4108 TAAGDLYTWG 4117
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3033 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3091
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3092 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3126
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3265
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 3266 VAVGALHCLAVTDAGQVYAWG 3286
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4211 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4269
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4270 CTEDGEVYTWG 4280
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G LA +E+G++ +WG D Y G+ G +TP+ + VVK
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 112 GWAHCVSVTEAGEVYTWG 129
G +++T+ G+VY+WG
Sbjct: 666 GSQFSIALTKDGQVYSWG 683
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV--VKAAAGWAHCVSVTE 121
LA S G++ +WG A+D L G P + + + V AAG AH VT
Sbjct: 4058 LALSSEGEVYSWGEAED---GKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTA 4114
Query: 122 AGEVYTWG 129
AG++YTWG
Sbjct: 4115 AGDLYTWG 4122
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3097 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3131
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWG 3283
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266
Query: 119 VTEAGEVYTWG 129
+E GEVYTWG
Sbjct: 4267 CSEDGEVYTWG 4277
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G V++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4055 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACV 4109
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4110 TAAGDLYTWG 4119
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3215 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3269
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 3270 VAVGALHCLAVTDAGQVYAWG 3290
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4215 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4273
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4274 CTEDGEVYTWG 4284
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4062 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4116
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4117 TAAGDLYTWG 4126
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3042 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3100
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3101 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3135
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3209 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3263
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 3264 VAVGALHCLAVTDAGQVYAWG 3284
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4209 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4267
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4268 CTEDGEVYTWG 4278
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4056 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACV 4110
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4111 TAAGDLYTWG 4120
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3036 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3094
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3095 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3129
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWG 3283
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4267 CTEDGEVYTWG 4277
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4055 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4109
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4110 TAAGDLYTWG 4119
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWG 3283
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 119 VTEAGEVYTWG 129
+E GEVYTWG
Sbjct: 4266 CSEDGEVYTWG 4276
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4054 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACV 4108
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4109 TAAGDLYTWG 4118
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
>gi|46249868|gb|AAH68834.1| LOC398469 protein [Xenopus laevis]
Length = 530
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 36/243 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 32 NEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCG-KKIVDLSYGSGPHILLC 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V++ A G H +++T G
Sbjct: 91 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG+ C G GS +T QS +P + A + + + +S
Sbjct: 148 EVFSWGYNNC----------GQVGS---GTTANQS-VPRKVASSLQSKVVVSISAGQTSS 193
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSL 232
A ++ + G+ L PC + + I +V G HTL LS + +
Sbjct: 194 MALTDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGV 253
Query: 233 ESA 235
A
Sbjct: 254 LYA 256
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 22 VYMWGY-----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
VY WG+ L P S + P P R G K + G C LA + K+++WG
Sbjct: 178 VYSWGWGDFGRLGHGDP--SDLFIPHPIRALQGLRIKQISCGDC-HCLAVTMENKVLSWG 234
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ G+ L + K P+ + AAG H V++TE G++Y WGW
Sbjct: 235 R-NQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGW 287
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ VV A
Sbjct: 621 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRFPKLLDTLQGKKVVDVAV 679
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++T+ GEV++WG
Sbjct: 680 GSTHCLALTDDGEVHSWG 697
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 2978 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQMVEGLRGKKIVH 3032
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+ G+VY WG
Sbjct: 3033 VAVGALHCLAVTDTGQVYAWG 3053
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G LA +E+G++ +WG D Y G+ G +TP+ + +VK
Sbjct: 573 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 627
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T+ G+VYTWG
Sbjct: 628 GSQFSVALTKDGQVYTWG 645
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 2805 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2863
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+Y+WG E
Sbjct: 2864 IEALKAKRIRDIACGSSHSAAITSSGELYSWGLGE 2898
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTE 121
LA S G++ +WG A+D L G P + + VV AAG AH +T
Sbjct: 3857 LALSSEGEVYSWGEAED---GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA 3913
Query: 122 AGEVYTWG 129
+GE++TWG
Sbjct: 3914 SGELFTWG 3921
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 18/88 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4010 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4068
Query: 119 VTE-----------------AGEVYTWG 129
TE GEVYTWG
Sbjct: 4069 CTEDGRIKVFQWGLPRWSLGLGEVYTWG 4096
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ +G+ L +PC V G+++ +VA G
Sbjct: 208 MNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYA 267
Query: 223 HTLILS 228
HTL+L+
Sbjct: 268 HTLVLT 273
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA +++G++ TWG D + S +H P + V+ A G HC++
Sbjct: 2308 GAQFSLALTKTGEVWTWGKGDYFRLGH-GSDQHVRKPTVIESLKDKKVIHVAVGALHCLA 2366
Query: 119 VTEAGEVYTWG 129
VT+ G+VY WG
Sbjct: 2367 VTDTGQVYAWG 2377
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T G+H P+ ++ A G HCV+
Sbjct: 3284 GSQFSVALTRSGSVYTWGKGDYHRLGHGT-GEHVRRPKKVAALQGKKIISIATGSLHCVA 3342
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 3343 CSDEGEVFTWG 3353
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-------ETPEPFPLPTEAS 105
K G LA S + +WG DD GK G ETP+
Sbjct: 3120 KIAVNSGGKHCLALSADNDVYSWGEGDD--------GKLGHGNRLACETPKLIEALQGYE 3171
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
++ A G AH ++T G++YTWG
Sbjct: 3172 IIDIACGGAHSAAITSTGQLYTWG 3195
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ +G+ L +PC V G+++ +VA G
Sbjct: 208 MSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYA 267
Query: 223 HTLILS 228
HTL+L+
Sbjct: 268 HTLVLT 273
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ K V CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE-ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P L + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQSTPCRLALQGVRVQRVACGYAHTLVLTDEGQVYAWG 257
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 39/189 (20%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 82 GSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKHVIEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG + ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTANQ-PIPRRVTSSLQNKVV 183
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC + L GV++ +VA
Sbjct: 184 VNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQS---TPCRLALQ-GVRVQRVAC 239
Query: 220 GGRHTLILS 228
G HTL+L+
Sbjct: 240 GYAHTLVLT 248
>gi|440796277|gb|ELR17386.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1595
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 10 ENEKMEECKETVVYMWG-----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFAL 64
EN M ++ VVY +G L P+ P P P + G A+
Sbjct: 1475 ENFSMVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAKIKITKIAAGH-QHAM 1533
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A SE G++ WG A+D GQ + + E P LP VV AA G +H V + +AG
Sbjct: 1534 AISEYGEVYLWG-ANDAGQLGFET-EDDEQLVPRHLPFGLPVVDAAGGKSHTVIIDQAGR 1591
Query: 125 VYTW 128
VY W
Sbjct: 1592 VYAW 1595
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
G F++ + G + ++G+AD +GQ L + P +P P +A + K AA
Sbjct: 1471 AAAGENFSMVLTRDGVVYSFGAAD-KGQ--LGHPDPQDMPTGYPCPIDALAKIKITKIAA 1527
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H ++++E GEVY WG
Sbjct: 1528 GHQHAMAISEYGEVYLWG 1545
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 59 GCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWA 114
CG A +A +E G+L TWGS D GQ L + + G +P + T AS +V+ + G+
Sbjct: 110 ACGEAHSMALNEWGQLYTWGS-DSCGQLGLETDE-GIQYKPKIVKTLASMLLVQISCGYK 167
Query: 115 HCVSVTEAGEVYTWGWRE 132
HC+++T GE+YTWG E
Sbjct: 168 HCMALTNHGELYTWGSNE 185
Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
E++ ILSP + +S ++ CG LA +E G+L GS +D GQ G
Sbjct: 37 EENYILSP--EEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGS-NDFGQL----GHD 89
Query: 92 GETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWGWREC 133
G + +P S+V A G AH +++ E G++YTWG C
Sbjct: 90 GCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSC 133
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 59 GCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWA 114
CG A +A +E G+L TWGS D GQ L + + G +P + T AS +V+ + G+
Sbjct: 91 ACGEAHSMALNEWGQLYTWGS-DSCGQLGLETDE-GIQYKPKIVKTLASMLLVQISCGYK 148
Query: 115 HCVSVTEAGEVYTWGWRE 132
HC+++T GE+YTWG E
Sbjct: 149 HCMALTNHGELYTWGSNE 166
Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
E++ ILSP + +S ++ CG LA +E G+L GS +D GQ G
Sbjct: 18 EENYILSP--EEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGS-NDFGQL----GHD 70
Query: 92 GETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWGWREC 133
G + +P S+V A G AH +++ E G++YTWG C
Sbjct: 71 GCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSC 114
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+G L S P+ + A G K V GG A A +E+G++ TWG + GQ
Sbjct: 220 FGRLGHNSERNQPVARFVDA--LAGKRVKQVACGGFHTA-AVTETGEVYTWGGGE-HGQL 275
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P E V++ GW+H V++T+ GEVYTWG
Sbjct: 276 GHGDKVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWG 320
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +WG +D GQ L P P E +V+ A G H V +TE GEVYTWG
Sbjct: 3 VYSWGRGED-GQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWG 59
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 22 VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF-ALATSESGKLITWG 76
VY WG + G + P P G S + CGF A SE G++ T+G
Sbjct: 159 VYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISA--CGFHTAALSEFGEVFTFG 216
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
EG+ + G + E +P +A V + A G H +VTE GEVYTWG
Sbjct: 217 ----EGK-FGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWG 268
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 17/117 (14%)
Query: 22 VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
VY WG L TS + P+ PI A L + CG G L +E G++ T
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPV--PIDA-LAERRIVQIACGSGHTVVL--TEEGEVYT 57
Query: 75 WGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WG DD L G +G P ++ + G H +VT +G++YTWG
Sbjct: 58 WGRGDD---GRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWG 111
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 2042 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 2096
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 2097 VAVGALHCLAVTDAGQVYAWG 2117
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3041 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3099
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 3100 CTEDGEVYTWG 3110
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
P+P ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 1869 PVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDD-GKLGHFSRXNCDKPRL 1927
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 1928 IEALKSRRIRDIACGSSHSAALTSSGELYTWGLGE 1962
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 2888 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 2942
Query: 120 TEAGEVYTWG 129
T AG +YTWG
Sbjct: 2943 TAAGGLYTWG 2952
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F++A ++SG + TWG D + S H P ++ A G
Sbjct: 3428 VCKVECGSQFSIALTKSGCVYTWGKGDYHRLGH-GSDDHVRRPRKVAALQGKKIISIATG 3486
Query: 113 WAHCVSVTEAGEVYTWG 129
HCV+ ++ GEVYTWG
Sbjct: 3487 SLHCVACSDQGEVYTWG 3503
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVKAAAGWA 114
G F+LA +++G++ TWG D Y G H P+ ++ A G
Sbjct: 2459 GAQFSLALTKAGQVWTWGKGD-----YFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGAL 2513
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+V+ WG
Sbjct: 2514 HCLAVTDTGQVFAWG 2528
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A + GK+ +WG DD +L S + E P + A G +H +VT +
Sbjct: 2305 AMALTVDGKVFSWGEGDDGKLGHL-SRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSS 2363
Query: 123 GEVYTWGWRE 132
GE+YTWG E
Sbjct: 2364 GELYTWGLGE 2373
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAA 110
K G ALA S G++ +WG +D L G + P + + V+ A
Sbjct: 3270 KVAVNSGGKHALALSVEGEVYSWGEGED---GKLGHGNRTQCDRPRVIESLRGKEVIDIA 3326
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G AH VT +GE+YTWG
Sbjct: 3327 CGGAHSACVTSSGELYTWG 3345
>gi|351542221|ref|NP_001082438.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 36/243 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 102 NEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCG-KKIVDLSYGSGPHILLC 160
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V++ A G H +++T G
Sbjct: 161 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 217
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG+ C G GS +T QS +P + A + + + +S
Sbjct: 218 EVFSWGYNNC----------GQVGS---GTTANQS-VPRKVASSLQSKVVVSISAGQTSS 263
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSL 232
A ++ + G+ L PC + + I +V G HTL LS + +
Sbjct: 264 MALTDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGV 323
Query: 233 ESA 235
A
Sbjct: 324 LYA 326
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA +++G++ TWG D + S +H P + V+ A G HC++
Sbjct: 3147 GAQFSLALTKTGEVWTWGKGDYFRLGH-GSDQHVRKPTVIESLKDKKVIHVAVGALHCLA 3205
Query: 119 VTEAGEVYTWG 129
VT+ G+VY WG
Sbjct: 3206 VTDTGQVYAWG 3216
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T G+H P+ ++ A G HCV+
Sbjct: 4123 GSQFSVALTRSGSVYTWGKGDYHRLGHGT-GEHVRRPKKVAALQGKKIISIATGSLHCVA 4181
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 4182 CSDEGEVFTWG 4192
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 15/121 (12%)
Query: 18 KETVVYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
K+ VY WG G TS ++ P L I A L G D CGG ++ A S +G
Sbjct: 532 KDYEVYSWGNGDGGRLGHGDTSTKEEPTL--IQA-LKGKDIIDVECGGT--YSAAISANG 586
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG--WAHCVSVTEAGEVYTW 128
L TWG + G+ + + TP ++ ++K A G +AH + +T G+VY+W
Sbjct: 587 ALYTWGRGN-YGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSW 645
Query: 129 G 129
G
Sbjct: 646 G 646
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A SE G + TWG + + T ++ PE + + VV + G +H ++
Sbjct: 681 GAQFSVALSEDGHVYTWGKGEGWKLGHPTE-ENVRFPEMVEVLRDRKVVGVSLGVSHVLA 739
Query: 119 VTEAGEVYTWGWRE 132
+T+ GEVY WG E
Sbjct: 740 LTDQGEVYGWGKNE 753
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-------ETPEPFPLPTEAS 105
K G LA S + +WG DD GK G ETP+
Sbjct: 3959 KIAVNSGGKHCLALSADNDVYSWGEGDD--------GKLGHGNRLACETPKLIEALQGYE 4010
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
++ A G AH ++T G++YTWG
Sbjct: 4011 IIDIACGGAHSAAITSTGQLYTWG 4034
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE----ASVVK 108
K CG L + GK+ +WG D Y G+ G P E +V+
Sbjct: 623 KVACGSFYAHTLCITSQGKVYSWGDGD-----YGKLGRGGSDGSKLPRLIEKLQNVKIVQ 677
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
G V+++E G VYTWG
Sbjct: 678 VYCGAQFSVALSEDGHVYTWG 698
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 68/194 (35%), Gaps = 33/194 (17%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P E+ V+K
Sbjct: 4068 CGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKVPKKIESLAGLGVIKVEC 4122
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG D+ G TG+ P + A K+
Sbjct: 4123 GSQFSVALTRSGSVYTWG----------KGDYHRLGH----GTGEHVRRPKKVAALQGKK 4168
Query: 172 AGEEVVKRRKTSSAREESENPASGDE----------FFTLSPCLVTLNPGVKITKVAAGG 221
+ +E E GD P LV+ G KIT VA G
Sbjct: 4169 IISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGS 4228
Query: 222 RHTLILSGKSLESA 235
HTL S + SA
Sbjct: 4229 AHTLAWSTNNASSA 4242
>gi|355693002|gb|EHH27605.1| RCC1 domain-containing protein 1 [Macaca mulatta]
Length = 376
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 41/181 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL E+G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDEAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 S 228
+
Sbjct: 316 T 316
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VK + G H VT GE+YTWGW
Sbjct: 288 QPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGW 326
>gi|27695022|gb|AAH43960.1| LOC398469 protein, partial [Xenopus laevis]
Length = 589
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 36/243 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 91 NEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCG-KKIVDLSYGSGPHILLC 149
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V++ A G H +++T G
Sbjct: 150 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 206
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG+ C G GS +T QS +P + A + + + +S
Sbjct: 207 EVFSWGYNNC----------GQVGS---GTTANQS-VPRKVASSLQSKVVVSISAGQTSS 252
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSL 232
A ++ + G+ L PC + + I +V G HTL LS + +
Sbjct: 253 MALTDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGV 312
Query: 233 ESA 235
A
Sbjct: 313 LYA 315
>gi|428184688|gb|EKX53542.1| hypothetical protein GUITHDRAFT_100528 [Guillardia theta CCMP2712]
Length = 709
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
S +K P + + + C + CG F LA SE+G++++WGS + G+ L+S
Sbjct: 131 SAQKEPTIEALRSVPCDVPVSQVACGED--FFLALSEAGRVLSWGS-NKHGELGLSSKLS 187
Query: 92 GETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
EP +P S +VK A+G HC +++E +++ WG
Sbjct: 188 MRMDEPTIVPALQSQRIVKIASGMRHCAALSEEKKLFMWG 227
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 17/132 (12%)
Query: 49 GDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV 106
G+S + + CG+ + SE GKLITWG +D GQ + S H + + PLP + +
Sbjct: 714 GESDEKIVAVSCGYYHTVTISEKGKLITWGR-NDYGQLGIGSKDHKNSAQYVPLPLSSKI 772
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A+ G H + + G V +G + G G+ + LP
Sbjct: 773 KTASCGCYHTLILMSNGRVMVFG----------RNNKGQLGAGSRTLPSADLPLPV---- 818
Query: 167 PSDKRAGEEVVK 178
PS+ A +EVV+
Sbjct: 819 PSNSLANDEVVR 830
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
S +G+L+ +G +D GQ L +H TP+ + + + A G H +++T GE
Sbjct: 625 VVSSNGELLMFG-MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGE 683
Query: 125 VYTWG 129
VY++G
Sbjct: 684 VYSFG 688
>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 551
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+P RL G + + GG G +LA + +G + WGS + GQ L G + P +
Sbjct: 183 PVPVRLPVGTTVTAIAGG-LGHSLAVASTGATLAWGS-NAFGQ--LGDGTTTGSSTPITV 238
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P +V AAG H +++T G VY WG
Sbjct: 239 PQLPTVTAVAAGDVHSLALTSTGTVYAWG 267
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+P RL G + + G +LA + G ++ WG + GQ + TP P
Sbjct: 78 TPVPVRLPVGTTVTAIAGSDT-HSLALTSVGTVLAWG-GNSFGQLGDGTTASSRTPVPVR 135
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
LP +V AAG +H +++T G V+ WG
Sbjct: 136 LPVGTTVTAIAAGTSHSLAITATGAVFAWG 165
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 40 SPIPA-RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
SP+P RL G + CG F+LA ++ G++ TWG D Y G +
Sbjct: 3157 SPLPVDRLNGLGVVQVECGAQ--FSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRR 3209
Query: 99 PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
P E VV A G HC++VT+AG+VY WG
Sbjct: 3210 PTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWG 3244
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P +V A G HCV+
Sbjct: 4147 GSQFSVALTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKVSALQGKKIVSIATGSLHCVA 4205
Query: 119 VTEAGEVYTWG 129
++ GEVYTWG
Sbjct: 4206 CSDKGEVYTWG 4216
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G L + SG + +WG D Y G+ G + P+ + +VVK
Sbjct: 612 CGSGDSQTLCVTNSGIVFSWGDGD-----YGKLGRGGSDGSKLPKIVDKLLDQNVVKVFC 666
Query: 112 GWAHCVSVTEAGEVYTWG 129
G ++T GEVYTWG
Sbjct: 667 GGQFSAALTAHGEVYTWG 684
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3327 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 3381
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT++G+VY WG
Sbjct: 3382 HCLAVTDSGQVYAWG 3396
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4477 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4535
Query: 119 VTEAGEVYTWG 129
+++GEVYTWG
Sbjct: 4536 CSDSGEVYTWG 4546
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCV 117
G +++A S G++ TWG A G + G P +V A G AHC+
Sbjct: 795 GSQYSVALSSEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCL 854
Query: 118 SVTEAGEVYTWGWREC 133
+++ +GEV+ WG +C
Sbjct: 855 ALSSSGEVFGWGRNDC 870
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G G +LA + G + WG D L +G + +P + + V + AG +
Sbjct: 743 GSGDAHSLALTSEGLVFAWGDGD---YGKLGNGNCNGSLQPILVESLPRVQRIFAGSQYS 799
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTR 141
V+++ G+VYTWG C+ V R
Sbjct: 800 VALSSEGQVYTWGKATCLGHQLVER 824
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 22 VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
+Y WG G + + + A L G + CG LA +E G + +WG
Sbjct: 3234 LYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3293
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ + +TP + V++ G +++T AGEV+TWG
Sbjct: 3294 GD-FGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWG 3344
>gi|160774403|gb|AAI55388.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
Length = 530
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 36/243 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 32 NEAIYTTQNNEVFVFGMNSSNCLGTGDNQSTIIPRRLDVLCG-KRIVDLSYGSGPHILVC 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E VV+ A G H +++T G
Sbjct: 91 NEDGEVYSWGH---NGYSQLGNGNAIQGVAPVQVCMELLAKKVVQVACGSHHSMALTSDG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV+ WG+ C G GS +T QS +P + + + + +S
Sbjct: 148 EVFCWGYNNC----------GQVGS---GTTANQS-VPRRVSATLQSKVVVSIAAGQSSS 193
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSL 232
A ++ + G+ L PC + V I +V G HTL LS + +
Sbjct: 194 MAVTDNGHVYCWGYNGTGQLGIGNTGNQLMPCRLVFAHPVCIIQVVLGYAHTLALSDQGV 253
Query: 233 ESA 235
A
Sbjct: 254 LYA 256
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 22 VYMWGY-----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
VY WG+ L P S + P P R G K + G C LA + K+++WG
Sbjct: 123 VYSWGWGDFGRLGHGDP--SDLFIPHPIRALQGLRIKQISCGDC-HCLAVTMENKVLSWG 179
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ G+ L + K P+ + AAG H V++TE G++Y WGW
Sbjct: 180 R-NQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGW 232
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + T H P +V A G HCV+
Sbjct: 4189 GSQFSVALTKSGAVYTWGKGDYHRLGHGTE-DHIRRPRRCTTLQGKKIVSIACGSLHCVA 4247
Query: 119 VTEAGEVYTWG 129
T+AGEVYTWG
Sbjct: 4248 CTDAGEVYTWG 4258
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG++ TWG D Y G H P+ V
Sbjct: 3162 VCQIECGAQFSLALTKSGQVWTWGKGD-----YFRLGHGTDAHVRKPQLVETLKGKKVTH 3216
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC+SV + G+VY WG
Sbjct: 3217 VAVGALHCLSVLDNGQVYAWG 3237
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ VV A
Sbjct: 609 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRYPKLLDSLQGKKVVDIAV 667
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++T+ GEV++WG
Sbjct: 668 GSTHCLALTDEGEVHSWG 685
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3169 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQIVEGLRGKKIVH 3223
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3224 VAVGALHCLAVTDSGQVYAWG 3244
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4148 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4206
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4207 CTEDGEVYTWG 4217
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 38 ILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---- 92
+ +P+ G DV CG G LA +E+G++ +WG D Y G+ G
Sbjct: 542 VTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGC 596
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+TP+ + +VK G V++T+ G+VYTWG
Sbjct: 597 KTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWG 633
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAA 110
K G LA S G++ +WG A+D L G P + + VV A
Sbjct: 3984 KVAVNSGGKHCLALSSEGEVYSWGEAED---GKLGHGNRSPCDRPRVIESLRGVEVVDIA 4040
Query: 111 AGWAHCVSVTEAGEVYTWG 129
AG AH +T +GE++TWG
Sbjct: 4041 AGGAHSACITASGELFTWG 4059
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A + GK+ +WG DD G+ S + + P + A G +H ++T +
Sbjct: 3021 AMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3079
Query: 123 GEVYTWGWRE 132
GE+Y+WG E
Sbjct: 3080 GELYSWGLGE 3089
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 2911 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 2965
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 2966 VAVGALHCLAVTDAGQVYAWG 2986
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEALQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +++G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G V++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 683
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 3731 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACV 3785
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 3786 TSAGDLYTWG 3795
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2738 PIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2796
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 2797 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2831
>gi|118351057|ref|XP_001008807.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|89290574|gb|EAR88562.1| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1264
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 21 VVYMWGY-------LPGTSPEKSPILSP-IPARLCGGDSWKDVCGGGCGF--ALATSESG 70
++Y+WG + G P K P + P I A C G+ + S G
Sbjct: 861 IIYIWGNGKDGRLGIEGEKPFKFPQIIPNIQA-----------CQVSLGYHHSACISNQG 909
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+++TWG + GQ +S ++ P P ++ S+V GW H ++++ G V++WG+
Sbjct: 910 QILTWGRGN-RGQLGHSSFENCLLPTPVNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGF 968
Query: 131 RE 132
E
Sbjct: 969 GE 970
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L S + TP + + A G+AH + +T+ G+VY WG
Sbjct: 232 NGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 35/203 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDALSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V + A G H + +T GEV+ WG + ++G ST
Sbjct: 145 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCL 205
Q +P + + + S A + +G+ L +PC
Sbjct: 192 QP-IPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250
Query: 206 VTLNPGVKITKVAAGGRHTLILS 228
+ G++I +VA G HTL+L+
Sbjct: 251 IAALQGIRIQRVACGYAHTLVLT 273
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3200 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3254
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3255 VAVGALHCLAVTDSGQVYAWG 3275
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4147 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4205
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4206 CTEDGEVYTWG 4216
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 3994 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4048
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4049 TAAGDLYTWG 4058
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3027 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3085
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3086 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3120
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWG 3283
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + V+K G +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4054 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4108
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4109 TAAGDLYTWG 4118
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWG 3283
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + L + +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQ-RLGLGTEEHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + V+K G +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4054 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4108
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4109 TAAGDLYTWG 4118
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
>gi|412990055|emb|CCO20697.1| predicted protein [Bathycoccus prasinos]
Length = 517
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 59 GCGFALATSES-GKLITWGSADDEGQSYLTSGKHGETPEPF---PLPTEASVVKAAAGWA 114
G FA+A ++S G L TWG+A D+ ++ K+G P P + K ++G+
Sbjct: 386 GFNFAVAVAKSSGALFTWGAALDDQEA---DSKYGLKPRLVKHEPQNINVAFTKVSSGYK 442
Query: 115 HCVSVTEAGEVYTWGW 130
HC ++T ++TWGW
Sbjct: 443 HCAAITSDDRLFTWGW 458
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3118 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3172
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3173 VAVGALHCLAVTDSGQVYAWG 3193
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4117 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4175
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4176 CTEDGEVYTWG 4186
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 569 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 627
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+ +TE EV++WG
Sbjct: 628 GSTHCLVLTEDSEVHSWG 645
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 504 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 558
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + V+K G +++T+ G+VY+WG
Sbjct: 559 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 593
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3964 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4015
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4016 ACVTAAGDLYTWG 4028
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2945 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3003
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H +T +GE+YTWG E
Sbjct: 3004 IQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGE 3038
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 90/235 (38%), Gaps = 47/235 (20%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 427 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 483
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 484 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 534
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 535 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 584
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKS 231
K + S + +++ G E P L+ G K+ VAAG H L+L+ S
Sbjct: 585 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDS 639
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 2959 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3013
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3014 VAVGALHCLAVTDSGQVYAWG 3034
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3957 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4015
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4016 CTEDGEVYTWG 4026
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 635 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 693
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 694 GSTHCLALTEDSEVHSWG 711
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 570 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 624
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 625 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 659
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 3804 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 3858
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 3859 TAAGDLYTWG 3868
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2786 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2844
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 2845 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2879
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 2496 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 2550
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 2551 VAVGALHCLAVTDSGQVYAWG 2571
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3494 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3552
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 3553 CTEDGEVYTWG 3563
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3341 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3392
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 3393 ACVTAAGDLYTWG 3405
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2323 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2381
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 2382 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2416
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWG 3282
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4052 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4107 TAAGDLYTWG 4116
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ V+ AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQVVEGLRGKKIVH 3265
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+ G+VY WG
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWG 3286
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4269 CTEDGEVYTWG 4279
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + +VK G +++T+ G+VYTWG
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 683
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH +
Sbjct: 4057 LALSFEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACI 4111
Query: 120 TEAGEVYTWG 129
T AG+++TWG
Sbjct: 4112 TAAGDLFTWG 4121
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWG 3282
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 55 VCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAA 110
+C CG+ +A S+SGKL T+G + GQ L G + + P E ++ + +
Sbjct: 216 MCMVACGWRHTIAVSQSGKLYTYGWSK-YGQ--LGHGDYADHLLPHQVAALAEFNITQVS 272
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
GW H V++TEAG++Y WGW + FG GS D
Sbjct: 273 GGWRHTVALTEAGKLYGWGWNK----------FGQVGSGDVD 304
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 80/222 (36%), Gaps = 33/222 (14%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
+Y WG + S + P P + G + + CG LA + G++ +WG
Sbjct: 79 IYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIA---CGDSHCLAVTADGEVYSWG 135
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
+ GQ L P SV AAG H +VT++G++Y WGW
Sbjct: 136 R-NQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGW------ 188
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE------ 190
G G+ G + LP E D++ R T + + +
Sbjct: 189 -------GRYGNLGLGDRGDR-MLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGW 240
Query: 191 ----NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
GD L P V IT+V+ G RHT+ L+
Sbjct: 241 SKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALT 282
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 32/181 (17%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHCVSVTEA 122
A ++SGKL WG L G G+ P +P + + A GW H ++V+++
Sbjct: 176 AVTDSGKLYGWGWGR---YGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQS 232
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G++YT+GW + +G G LP + A ++ + R T
Sbjct: 233 GKLYTYGWSK----------YGQLGHGDY----ADHLLPHQVAALAEFNITQVSGGWRHT 278
Query: 183 SSAREESE----------NPASGDEFFTLSPCLVTLNPG--VKITKVAAGGRHTLILSGK 230
+ E + SGD SP L+++ PG ++ +V+ G RHT+ ++ K
Sbjct: 279 VALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISI-PGQHQRVVQVSCGWRHTVAVTDK 337
Query: 231 S 231
+
Sbjct: 338 N 338
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAAGWAHC 116
GG +A +E+GKL WG + GQ +P+ +P + VV+ + GW H
Sbjct: 273 GGWRHTVALTEAGKLYGWG-WNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHT 331
Query: 117 VSVTEAGEVYTWG 129
V+VT+ VY+WG
Sbjct: 332 VAVTDKNNVYSWG 344
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3274 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3328
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3329 VAVGALHCLAVTDSGQVYAWG 3349
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4273 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4331
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4332 CTEDGEVYTWG 4342
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 727 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 785
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 786 GSTHCLALTEDSEVHSWG 803
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 662 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 716
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + V+K G +++T+ G+VY+WG
Sbjct: 717 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 751
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4120 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4171
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4172 ACVTAAGDLYTWG 4184
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3101 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3159
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3160 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3194
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ V+ AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQVVEGLRGKKIVH 3265
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+ G+VY WG
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWG 3286
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4269 CTEDGEVYTWG 4279
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + +VK G +++T+ G+VYTWG
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 683
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH +
Sbjct: 4057 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACI 4111
Query: 120 TEAGEVYTWG 129
T AG+++TWG
Sbjct: 4112 TAAGDLFTWG 4121
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 2959 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQVVEGLRGKKIVH 3013
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+ G+VY WG
Sbjct: 3014 VAVGALHCLAVTDTGQVYAWG 3034
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3959 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4017
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4018 CTEDGEVYTWG 4028
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 2786 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD-GKLGHFSRMNCDKPRL 2844
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 2845 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 2879
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----S 105
K G LA S G++ +WG A+D GK G +P P E+
Sbjct: 3795 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 3846
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV AAG AH +T AG++YTWG
Sbjct: 3847 VVDIAAGGAHSACITAAGDLYTWG 3870
>gi|355694474|gb|AER99681.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 306
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 89 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 143
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+AG+VY WG
Sbjct: 144 VAVGALHCLAVTDAGQVYAWG 164
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ V+ AA
Sbjct: 635 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 693
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 694 GSTHCLALTEDSEVHSWG 711
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3187 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQVVEGLRGKKIVH 3241
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+ G+VY WG
Sbjct: 3242 VAVGALHCLAVTDTGQVYAWG 3262
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4186 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4244
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4245 CTEDGEVYTWG 4255
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 570 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 624
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + +VK G +++T+ G+VYTWG
Sbjct: 625 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 659
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3014 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD-GKLGHFSRMNCDKPRL 3072
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3073 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3107
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4033 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4084
Query: 117 VSVTEAGEVYTWG 129
+T AG+++TWG
Sbjct: 4085 ACITAAGDLFTWG 4097
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3147 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3201
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3202 VAVGALHCLAVTDSGQVYAWG 3222
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4145 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4203
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4204 CTEDGEVYTWG 4214
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 589 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 647
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 648 GSTHCLALTEDSEVHSWG 665
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA S G++ +WG A+D G+ S + P VV AAG AH VT AG
Sbjct: 3992 LALSSEGEVYSWGEAED-GKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAG 4050
Query: 124 EVYTWG 129
++YTWG
Sbjct: 4051 DLYTWG 4056
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2974 PIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3032
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3033 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3067
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 39 LSPIPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--- 92
++ I + G D K + CG LA E+G++ +WG D Y G+ G
Sbjct: 521 MNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGD-----YGKLGRGGSDG 575
Query: 93 -ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+TP+ + VVK G +++T+ G+VY+WG
Sbjct: 576 CKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 613
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3213 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3267
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3268 VAVGALHCLAVTDSGQVYAWG 3288
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4212 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4270
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4271 CTEDGEVYTWG 4281
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 664 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 722
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 723 GSTHCLALTEDSEVHSWG 740
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 599 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 653
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + V+K G +++T+ G+VY+WG
Sbjct: 654 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 688
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4059 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4113
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4114 TAAGDLYTWG 4123
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3040 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3098
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3099 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3133
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ V+ AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQVVEGLRGKKIVH 3265
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+ G+VY WG
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWG 3286
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TW D + S H P V+ A G HCV
Sbjct: 4210 GSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4269
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4270 CTEDGEVYTWG 4280
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + +VK G +++T+ G+VYTWG
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 683
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4057 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4108
Query: 117 VSVTEAGEVYTWG 129
+T AG+++TWG
Sbjct: 4109 ACITAAGDLFTWG 4121
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWG 3283
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+ +TE EV++WG
Sbjct: 718 GSTHCLVLTEDSEVHSWG 735
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + V+K G +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4054 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4108
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4109 TAAGDLYTWG 4118
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H +T +GE+YTWG E
Sbjct: 3094 IQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGE 3128
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 90/235 (38%), Gaps = 47/235 (20%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKS 231
K + S + +++ G E P L+ G K+ VAAG H L+L+ S
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDS 729
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWG 3282
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4052 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4107 TAAGDLYTWG 4116
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWG 3283
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + V+K G +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4054 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4106 ACVTAAGDLYTWG 4118
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3210 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3264
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3265 VAVGALHCLAVTDSGQVYAWG 3285
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4209 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4267
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4268 CTEDGEVYTWG 4278
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++ G++ +WG D++ + T +H P V+ AAG HC++
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPRLLEGLHGKKVIDVAAGSTHCLA 724
Query: 119 VTEAGEVYTWG 129
+TE EV++WG
Sbjct: 725 LTEDSEVHSWG 735
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G V++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4056 LALSSEGEVYSWGEAED--------GKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHS 4107
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4108 ACVTAAGDLYTWG 4120
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3037 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3095
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3096 IEALRAKRIRDIACGSSHSAALTSSGELYTWGLGE 3130
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWG 3282
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4052 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4107 TAAGDLYTWG 4116
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K CG ++A +G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 72/186 (38%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V + A G
Sbjct: 106 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVA 207
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A + +G+ L +PC + G+++ +VA G
Sbjct: 208 VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYA 267
Query: 223 HTLILS 228
HTL+L+
Sbjct: 268 HTLVLT 273
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWG 3282
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4052 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4107 TAAGDLYTWG 4116
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 22 VYMWGY-----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
VY WG+ L P S + P P R G K + G C LA + K+++WG
Sbjct: 86 VYSWGWGDFGRLGHGDP--SDLFIPHPIRALQGLRIKQISCGDC-HCLAVTMENKVLSWG 142
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ G+ L + K P+ + AAG H V++TE G++Y WGW
Sbjct: 143 R-NQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGW 195
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 55 VCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAA 110
+C CG+ +A S+SGKL T+G + GQ L G + + P E ++ + +
Sbjct: 216 MCMVACGWRHTIAVSQSGKLYTYGWSK-YGQ--LGHGDYADHLLPHQVAALAEFNITQVS 272
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
GW H V++TEAG++Y WGW + FG GS D
Sbjct: 273 GGWRHTVALTEAGKLYGWGWNK----------FGQVGSGDVD 304
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 79/222 (35%), Gaps = 33/222 (14%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
+Y WG + S + P P + G + + CG LA + G++ +WG
Sbjct: 79 IYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIA---CGDSHCLAVTADGEVYSWG 135
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
+ GQ L P SV AAG H +VT+ G++Y WGW
Sbjct: 136 R-NQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGW------ 188
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE------ 190
G G+ G + LP E D++ R T + + +
Sbjct: 189 -------GRYGNLGLGDRGDR-MLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGW 240
Query: 191 ----NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
GD L P V IT+V+ G RHT+ L+
Sbjct: 241 SKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALT 282
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAAGWAHC 116
GG +A +E+GKL WG + GQ +P+ +P + VV+ + GW H
Sbjct: 273 GGWRHTVALTEAGKLYGWG-WNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHT 331
Query: 117 VSVTEAGEVYTWG 129
V+VT+ VY+WG
Sbjct: 332 VAVTDKNNVYSWG 344
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 32/181 (17%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHCVSVTEA 122
A ++ GKL WG L G G+ P +P + + A GW H ++V+++
Sbjct: 176 AVTDGGKLYGWGWGR---YGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQS 232
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G++YT+GW + +G G LP + A ++ + R T
Sbjct: 233 GKLYTYGWSK----------YGQLGHGDY----ADHLLPHQVAALAEFNITQVSGGWRHT 278
Query: 183 SSAREESE----------NPASGDEFFTLSPCLVTLNPG--VKITKVAAGGRHTLILSGK 230
+ E + SGD SP L+++ PG ++ +V+ G RHT+ ++ K
Sbjct: 279 VALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISI-PGQHQRVVQVSCGWRHTVAVTDK 337
Query: 231 S 231
+
Sbjct: 338 N 338
>gi|428163598|gb|EKX32661.1| hypothetical protein GUITHDRAFT_148483 [Guillardia theta CCMP2712]
Length = 407
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
Query: 34 EKSPILSPIPARLCGGDSWKDV------CGGGCGFALATSESGKLITWGSADDEGQSYLT 87
E +L P P R+C + ++ G + A E GKL TWG G+ L
Sbjct: 144 EDDSLLFPEPFRVCNQPTRVNIEDSIAAISAGLFHSAAVGEKGKLYTWGKG---GEGQLG 200
Query: 88 SGKHGETPEPFPLPT--EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
SG + P + ++ KAA G H ++T GE+Y WGW
Sbjct: 201 SGMMADLYVPAAVKDLKHKNITKAACGSFHTAALTNEGELYVWGW 245
>gi|350994396|ref|NP_001017352.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
gi|89272755|emb|CAJ83624.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
Length = 599
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 36/243 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 101 NEAIYTTQNNEVFVFGMNSSNCLGTGDNQSTIIPRRLDVLCG-KRIVDLSYGSGPHILVC 159
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V++ A G H +++T G
Sbjct: 160 NEDGEVYSWGH---NGYSQLGNGNAIQGVAPVQVCMELLAKKVIQVACGSHHSMALTSDG 216
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV+ WG+ C G GS +T QS +P + + + + +S
Sbjct: 217 EVFCWGYNNC----------GQVGS---GTTANQS-VPRRVSATLQSKVVVSIAAGQSSS 262
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSL 232
A ++ + G+ L PC + V I +V G HTL LS + +
Sbjct: 263 MAVTDNGHVYCWGYNGTGQLGIGNTGNQLMPCRLVFAHPVCIIQVVLGYAHTLALSDQGV 322
Query: 233 ESA 235
A
Sbjct: 323 LYA 325
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3202 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3256
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3257 VAVGALHCLAVTDSGQVYAWG 3277
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4200 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4258
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4259 CTEDGEVYTWG 4269
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4047 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4101
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4102 TAAGDLYTWG 4111
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3029 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3087
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3088 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3122
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWG 3282
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4236 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4294
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4295 CTEDGEVYTWG 4305
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4083 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4137
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4138 TAAGDLYTWG 4147
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3151 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3205
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3206 VAVGALHCLAVTDSGQVYAWG 3226
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4150 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4208
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4209 CTEDGEVYTWG 4219
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 662
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 663 GSTHCLALTEDSEVHSWG 680
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 539 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 593
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + V+K G +++T+ G+VY+WG
Sbjct: 594 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 628
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3997 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4048
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4049 ACVTAAGDLYTWG 4061
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2978 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3036
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3037 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3071
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWG 3282
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4052 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4107 TAAGDLYTWG 4116
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
>gi|307186651|gb|EFN72134.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 815
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
+Y WG + +S + +P D+ CG FA+A ++ GKL +WG +
Sbjct: 61 IYTWGNIKYSSSYYDIVSTPYQVNF-------DIIHIACGSSFAMALNKDGKLYSWG-LN 112
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ + S K P ++VK G H +++ G++Y+WG
Sbjct: 113 NYGQLGINSTKENYDPCLITSLIHVTIVKVVCGLEHSLALNSEGKIYSWG 162
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKA 109
K VCG +LA + GK+ +WGS + +GQ L GK E P P +
Sbjct: 141 KVVCG--LEHSLALNSEGKIYSWGS-NSKGQ--LGHGKKTEREIKPVMLCAPIMGKISDI 195
Query: 110 AAGWAHCVSVTEAGEVYTWGWREC 133
AA V++ + G VY WG R C
Sbjct: 196 AAQDDKSVAINKIGHVYVWGHRVC 219
Score = 36.6 bits (83), Expect = 9.7, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 79/231 (34%), Gaps = 83/231 (35%)
Query: 4 NGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSP--IPARL--CGGDSWKDVCGGG 59
N K E+ EK VY WGY K L+ +PA++ G D+
Sbjct: 387 NDRKPEKPEK--------VYSWGYNDNCRLGKLDSLATTYLPAKMDSLRGKRIIDIASNN 438
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
+LA ++SGK+ WGS + T + P + + + A G + +++
Sbjct: 439 YN-SLALTDSGKIYVWGSVN-------------FTKKSLPDQCQVNPCQIACGMSFVMAL 484
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T G++Y+WG T +G G
Sbjct: 485 TNDGKLYSWG----------TNTYGQLGI------------------------------- 503
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGK 230
SEN L PCL+T V I K+ G H+L L+ K
Sbjct: 504 --------SSEN--------DLYPCLITSLENVHIDKIVCGSEHSLALTSK 538
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWG 3282
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4052 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4107 TAAGDLYTWG 4116
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWG 3282
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4052 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4107 TAAGDLYTWG 4116
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3212 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3266
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3267 VAVGALHCLAVTDSGQVYAWG 3287
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4269 CTEDGEVYTWG 4279
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 604 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 662
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 663 GSTHCLALTEDSEVHSWG 680
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 539 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 593
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 594 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 628
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4057 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4111
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4112 TAAGDLYTWG 4121
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3039 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3097
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3098 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3132
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K CG ++A +G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 72/186 (38%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V + A G
Sbjct: 82 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVA 183
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A + +G+ L +PC + G+++ +VA G
Sbjct: 184 VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYA 243
Query: 223 HTLILS 228
HTL+L+
Sbjct: 244 HTLVLT 249
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 2903 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 2957
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 2958 VAVGALHCLAVTDSGQVYAWG 2978
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3901 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3959
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 3960 CTEDGEVYTWG 3970
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 3748 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 3802
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 3803 TAAGDLYTWG 3812
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2730 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2788
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 2789 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2823
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3468 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3522
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3523 VAVGALHCLAVTDSGQVYAWG 3543
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4464 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4522
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4523 CTEDGEVYTWG 4533
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 919 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 977
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 978 GSTHCLALTEDSEVHSWG 995
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 854 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 908
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 909 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 943
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3295 PIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3353
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3354 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3388
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ V AAG AH V
Sbjct: 4311 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACV 4365
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4366 TAAGDLYTWG 4375
>gi|332026148|gb|EGI66296.1| RCC1 and BTB domain-containing protein 1 [Acromyrmex echinatior]
Length = 515
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 22 VYMWGY---------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
VY WG + G S +LS + CG D F +A + +GK+
Sbjct: 148 VYAWGSNNSGQMNNSIYGLSTTPKLVLSNVVCISCGND-----------FTIAVTRNGKV 196
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WG ++ GQ L G HG T+ +++K G+ H +++T+ G +Y WG
Sbjct: 197 YGWGR-NNVGQ--LGIGNHGNKN-----ATQQTLIKVTCGFEHTLALTDKGNIYAWG 245
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P R+ K V CG ++A ++G+ WG
Sbjct: 149 VYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP ++++ A G+AH +++T+ G VY+WG
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S A+PT ++ TS+A+ +S
Sbjct: 259 -------ANSYGQLGTGNKSNQAVPTLINMDKERMVEVAACHTSHTSAAKTQS 304
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3204 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQMVEGLRGKKIVH 3258
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+ G+VY WG
Sbjct: 3259 VAVGALHCLAVTDTGQVYAWG 3279
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ VV A
Sbjct: 649 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRYPKLLDSLQGKKVVDVAV 707
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++T+ GEV +WG
Sbjct: 708 GSTHCLALTDDGEVLSWG 725
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4204 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4262
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4263 CTEDGEVYTWG 4273
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G LA +E+G++ +WG D Y G+ G +TP+ + +VK
Sbjct: 601 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 655
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T+ G+VYTWG
Sbjct: 656 GSQFSVALTKDGQVYTWG 673
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3031 PIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3089
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+Y+WG E
Sbjct: 3090 IEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3124
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAA 110
K G LA S G++ +WG A+D L G P + + VV A
Sbjct: 4040 KVAVNSGGKHCLALSSEGEVYSWGEAED---GKLGHGNRSPCDRPRVIESLRGVEVVDIA 4096
Query: 111 AGWAHCVSVTEAGEVYTWG 129
AG AH +T +GE++TWG
Sbjct: 4097 AGGAHSACITASGELFTWG 4115
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S IP R+ G K V CG ++A ++G++ WG
Sbjct: 149 VYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWG 258
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 81/203 (39%), Gaps = 35/203 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG G + L +G P
Sbjct: 65 PRRLDSLSDKKIACLSYGSGPHIILATTE-GEVFTWGH---NGYTQLGNGTTNHGLVPCQ 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEVY WG+ ++G ST
Sbjct: 121 VSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYN-------------NSGQVGSGSTAN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCL 205
Q A+P + + + S A ++ +G+ L +PC
Sbjct: 168 Q-AIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 226
Query: 206 VTLNPGVKITKVAAGGRHTLILS 228
V G+++ +VA G HTL+L+
Sbjct: 227 VAALQGIRVQRVACGFAHTLVLT 249
>gi|351715554|gb|EHB18473.1| RCC1 domain-containing protein 1 [Heterocephalus glaber]
Length = 370
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 68/175 (38%), Gaps = 33/175 (18%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK---AAAGWAH 115
G AL +G++ +WG GQ L G PEP PL + AA GW H
Sbjct: 164 GIEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAEPEPRPLEALQGLPMSQLAAGGW-H 219
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR ++ TG+ L
Sbjct: 220 SVCVSETGDIYIWGWNESGQLALPTRSLAEG---KRTDTGEDEGL--------------- 261
Query: 176 VVKRRKTSSAREESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILS 228
S +E PA F + P L+ L G + V+ G RHT +++
Sbjct: 262 ---NEDGSKVERAAEAPAP---FIAIQPFPALLDLPLGSEAVGVSCGSRHTAVVT 310
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQVVEGLRGKKIVH 3262
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+ G+VY WG
Sbjct: 3263 VAVGALHCLAVTDTGQVYAWG 3283
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4077 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4135
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4136 CTEDGEVYTWG 4146
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ VV AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVVDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G V++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 683
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3128
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 2845 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 2899
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 2900 VAVGALHCLAVTDSGQVYAWG 2920
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3843 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3901
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 3902 CTEDGEVYTWG 3912
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 347 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 405
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 406 GSTHCLALTEDSEVHSWG 423
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 282 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 336
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 337 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 371
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3690 LALSSEGEVYSWGEAED--------GKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHS 3741
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 3742 ACVTAAGDLYTWG 3754
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2672 PIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2730
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 2731 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2765
>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 553
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 70/172 (40%), Gaps = 18/172 (10%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA + +G ++ WG + EGQ S TP LPT V AAG H +++T AG
Sbjct: 100 LALTSAGTVLAWGR-NIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAG 158
Query: 124 EVYTWGWRECVPSAKVTRDFGSA--GSFQKDSTGKQSALP--TEQAPPSDKRAGEEVVKR 179
+ WG FG GS ST +LP T A + R V+
Sbjct: 159 TILAWG----------DNTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTS 208
Query: 180 RKTSS---AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + G +P VTL PGV +T VA G H+L+L+
Sbjct: 209 TGPTLLTWGKNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSLVLT 260
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + +DF S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKDFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 42.7 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L G+ G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHGREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ + E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEEDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
Length = 815
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G F+ A ++SGK+ TWG +++GQ L +P+ + +V + G H
Sbjct: 212 AGWAFSAAVTKSGKIFTWG-FNEKGQLGLKHRWFNSSPQLVKTLLDVKIVSVSCGRQHIG 270
Query: 118 SVTEAGEVYTWG 129
+VTE G++YTWG
Sbjct: 271 AVTEDGDLYTWG 282
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3016 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3074
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 3075 CTEDGEVYTWG 3085
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQMVEGLRGKKIVH 2070
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VTE G+V+ WG
Sbjct: 2071 VAVGALHCLAVTETGQVFAWG 2091
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAA 110
K G LA S G+L +WG A+D L G P + + VV A
Sbjct: 2852 KVAVNSGGKHCLALSSEGELYSWGEAED---GKLGHGNRSPCDRPRVIESLRGVEVVDIA 2908
Query: 111 AGWAHCVSVTEAGEVYTWG 129
AG AH +T +GE+YTWG
Sbjct: 2909 AGGAHSACITASGELYTWG 2927
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 1843 PIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 1901
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+Y+WG E
Sbjct: 1902 IEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE 1936
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 800 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 854
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 855 VAVGALHCLAVTDSGQVYAWG 875
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 1798 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1856
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 1857 CTEDGEVYTWG 1867
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 1645 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 1699
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 1700 TAAGDLYTWG 1709
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 627 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 685
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 686 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 720
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4269 CTEDGEVYTWG 4279
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ ++
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQVVEGLRGKKIIH 3265
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT+ G+VY WG
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWG 3286
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ +WG D++ + T +H P+ V+ A
Sbjct: 659 DIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGEKVIDVVA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EVY+WG
Sbjct: 718 GSTHCLALTEDSEVYSWG 735
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + +VK + G V++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWG 683
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+Y+WG E
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3131
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----S 105
K G LA S G++ +WG A+D GK G +P P E+
Sbjct: 4046 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 4097
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV AAG AH +T AG++YTWG
Sbjct: 4098 VVDIAAGGAHSACITAAGDLYTWG 4121
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 243 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 297
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 298 VAVGALHCLAVTDSGQVYAWG 318
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 1242 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1300
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 1301 CTEDGEVYTWG 1311
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A D G +P P E+ VV AAG AH V
Sbjct: 1089 LALSSEGEVYSWGEAKDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 1143
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 1144 TAAGDLYTWG 1153
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 70 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 128
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 129 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 163
>gi|47214873|emb|CAG00921.1| unnamed protein product [Tetraodon nigroviridis]
Length = 565
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP-----LPTEASVVKAAAGW 113
GC +LA SG + +WG+A+D GQ L P P +P VV+ A G
Sbjct: 85 GCNHSLAVDASGHVFSWGAAED-GQLGLNPNPLSGRPRRVPTGMVTIPLRVPVVQVACGK 143
Query: 114 AHCVSVTEAGEVYTWG 129
+H V++T G+V +WG
Sbjct: 144 SHSVALTTGGDVLSWG 159
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4096 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4154
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4155 CTEDGEVYTWG 4165
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + V+K G +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3943 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3994
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 3995 ACVTAAGDLYTWG 4007
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 1512 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 1566
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 1567 VAVGALHCLAVTDSGQVYAWG 1587
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A +++G + TWG D + S H P + A G HCV
Sbjct: 2513 GSQFSVALTKAGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKAIAIATGSLHCVC 2571
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 2572 CTEDGEVYTWG 2582
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA S G++ +WG A+D G+ S + P VV AAG AH VT AG
Sbjct: 2360 LALSSEGEVYSWGEAED-GKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAG 2418
Query: 124 EVYTWG 129
++YTWG
Sbjct: 2419 DLYTWG 2424
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
P+P ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 1339 PLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 1397
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 1398 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 1432
>gi|432901463|ref|XP_004076848.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Oryzias latipes]
Length = 451
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA S G+L WG+++ S +T +P PL +VV+AA G + E
Sbjct: 282 SLAVSRDGQLFGWGNSEYRQLSSVTESTQMNSPRHLPLKGCGTVVQAACGGTQVAVLNEK 341
Query: 123 GEVYTWGW 130
GEV+ WG+
Sbjct: 342 GEVFVWGY 349
>gi|46250190|gb|AAH68656.1| MGC81035 protein [Xenopus laevis]
Length = 530
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 36/243 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG KD+ G L
Sbjct: 32 NEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCG-KKIKDLSYGSGPHILLC 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V+K A G H +++T G
Sbjct: 91 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG+ ++G +T QS +P + + + + + +S
Sbjct: 148 EVFSWGYN-------------NSGQVGSGTTANQS-VPRKVSSSLQSKVVVSIAAGQTSS 193
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSL 232
A ++ + G+ L PC + V I +V G H+L LS + +
Sbjct: 194 MAITDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPVCIIQVVLGYAHSLALSDQGV 253
Query: 233 ESA 235
A
Sbjct: 254 LYA 256
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 476 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 534
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 535 CTEDGEVYTWG 545
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 323 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 377
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 378 TAAGDLYTWG 387
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 649 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 707
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 708 GSTHCLALTEDSEVHSWG 725
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 584 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 638
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 639 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 673
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3952 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4010
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4011 CTEDGEVYTWG 4021
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFP-LPTEASVV 107
VC CG F+LA ++SG + TWG D Y G H P+ L + V
Sbjct: 2957 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVA 3011
Query: 108 KAAAGWAHCVSVTEAGEVYTWG 129
+ +G HC++VT++G+VY WG
Sbjct: 3012 CSCSGALHCLAVTDSGQVYAWG 3033
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 3799 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 3853
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 3854 TAAGDLYTWG 3863
>gi|395502432|ref|XP_003755585.1| PREDICTED: RCC1 domain-containing protein 1 [Sarcophilus harrisii]
Length = 357
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 75/182 (41%), Gaps = 44/182 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEA----SVVKAAAGW 113
G AL G++ TWG+ L HG E P P EA ++ + AAG
Sbjct: 149 GAEHALLLGGMGQVYTWGTGR------LGQLGHGALEAELVPRPVEALLGLAMAQVAAGG 202
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + V+EAG++Y WGW E Q ALP+ +K
Sbjct: 203 WHSLCVSEAGDLYIWGWNE----------------------SGQLALPSRTIAEREK--- 237
Query: 174 EEVVKRRKTSSAREESENPAS-GD----EFFTLS--PCLVTLNPGVKITKVAAGGRHTLI 226
V SS E++ PA+ GD +F + P L+ L G ++ K + G RHT +
Sbjct: 238 -TVAGASGLSSCSPEAKKPATDGDGDLAQFIAIQPFPALLDLPSGSEVIKASCGSRHTAV 296
Query: 227 LS 228
++
Sbjct: 297 VT 298
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP+ + V+KA+ G H VT GE+YTWGW
Sbjct: 270 QPFPALLDLPSGSEVIKASCGSRHTAVVTRDGELYTWGW 308
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S IP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
>gi|221108961|ref|XP_002157481.1| PREDICTED: regulator of chromosome condensation-like [Hydra
magnipapillata]
Length = 441
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAGW 113
CGG + SE G++ +WG DD T G GE P LP VV A+AG
Sbjct: 79 CGGM--HTIGVSEHGEVYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQGIRVVYASAGD 136
Query: 114 AHCVSVTEAGEVYTWG-WREC 133
+H ++T+ G V+ WG +R+
Sbjct: 137 SHSAALTDDGRVFAWGAYRDA 157
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 620 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 678
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 679 GSTHCLALTEDSEVHSWG 696
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 555 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 609
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 610 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 644
>gi|74183965|dbj|BAE37031.1| unnamed protein product [Mus musculus]
Length = 714
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 85 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 143
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 144 CTEDGEVYTWG 154
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVK 108
VC CG F+LA S SG + TWG D Y G +T P + +V
Sbjct: 2669 VCKVACGAQFSLALSTSGLVWTWGKGD-----YYRLGHGNDTHVRKPQIVDGLRGKKIVD 2723
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+V+ WG
Sbjct: 2724 VAVGALHCLAVTDSGQVFAWG 2744
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVKAAAGWA 114
G F++A + SG + TWG D Y G H P+ V+ A G
Sbjct: 3607 GSQFSVALTRSGAVYTWGKGD-----YYRLGHGVDDHVRRPKRVAALQGKKVITIATGSL 3661
Query: 115 HCVSVTEAGEVYTWG 129
HCV+ T+ GEVYTWG
Sbjct: 3662 HCVASTDTGEVYTWG 3676
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA + G + TWG + + T H P+ VV + G
Sbjct: 177 VCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTE-DHVRHPKLVEALDGKHVVDVSVG 235
Query: 113 WAHCVSVTEAGEVYTWG 129
HC+++T+AGEVY WG
Sbjct: 236 SIHCLALTDAGEVYCWG 252
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 649 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 707
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 708 GSTHCLALTEDSEVHSWG 725
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 584 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 638
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 639 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 673
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 41 PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
PIP R+ G + V CG ++A +SG++ WG + GQ L S + TP
Sbjct: 179 PIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWG-YNGNGQLGLGSSGNHSTPCRI 237
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
V + A G+AH + +T+ G+VY WG
Sbjct: 238 AALQGIRVQRVACGYAHTLVLTDDGQVYAWG 268
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 73/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG + L +G P + T S V++ A G
Sbjct: 92 GSGPHIVLATTE-GEVFTWGH---NAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGS 147
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG ++G ST Q +P R
Sbjct: 148 YHSLVLTSDGEVFAWGCN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNRVV 193
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A +S +G+ L +PC + G+++ +VA G
Sbjct: 194 VNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYA 253
Query: 223 HTLILS 228
HTL+L+
Sbjct: 254 HTLVLT 259
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 454 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 512
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 513 CTEDGEVYTWG 523
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 301 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 355
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 356 TAAGDLYTWG 365
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 68/172 (39%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D + T+ P + +++ + G HC
Sbjct: 91 ACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHC 150
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + ++F S S Q+ +P Q +
Sbjct: 151 MALAADGQFFTWGQNRH-GQLGLGKEFPSQASPQR--VKSLEGIPLAQVAAGGAHSFALS 207
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ R + DE SPC V L K+ ++ G HT +L+
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLT 259
>gi|74201803|dbj|BAE28504.1| unnamed protein product [Mus musculus]
Length = 681
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 52 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 110
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 111 CTEDGEVYTWG 121
>gi|351542219|ref|NP_001084549.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 36/243 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG KD+ G L
Sbjct: 102 NEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCG-KKIKDLSYGSGPHILLC 160
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V+K A G H +++T G
Sbjct: 161 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDG 217
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG + ++G +T QS +P + + + + + +S
Sbjct: 218 EVFSWG-------------YNNSGQVGSGTTANQS-VPRKVSSSLQSKVVVSIAAGQTSS 263
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSL 232
A ++ + G+ L PC + V I +V G H+L LS + +
Sbjct: 264 MAITDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPVCIIQVVLGYAHSLALSDQGV 323
Query: 233 ESA 235
A
Sbjct: 324 LYA 326
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 554 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 612
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 613 CTEDGEVYTWG 623
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 401 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 455
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 456 TAAGDLYTWG 465
>gi|440906559|gb|ELR56810.1| RCC1 domain-containing protein 1, partial [Bos grunniens mutus]
Length = 165
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 20/120 (16%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AA GW H V ++E G++Y WGW E A T+ G +++G +
Sbjct: 6 AAGGW-HSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAEASGLE----------- 53
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G EV ++ S+ + + P + F P L+ L+PG + KV+ G RHT +L+
Sbjct: 54 --EDGSEV---KRGSAGEDGAPAPFIAVQPF---PALLDLSPGSEAVKVSCGSRHTAVLT 105
>gi|408681154|ref|YP_006880981.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
gi|328885483|emb|CCA58722.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
Length = 394
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+P +PIP + D KDV G GC F++A + G + TWG D+ L +G +
Sbjct: 164 TPYKAPIPVQSL--DKVKDV-GAGCDFSVALRQDGTVWTWGKGDN---GRLGTGNNTTRE 217
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P +P A V A G H +++T G V WG
Sbjct: 218 TPQKVPDLADVESVAVGCEHVLALTADGVVKAWG 251
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ + P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLT 258
Score = 40.0 bits (92), Expect = 0.91, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 51/229 (22%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWG----------- 109
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
AG S G+ + TE++ P ++ ++ + + S A+ +
Sbjct: 110 -----AG-----SDGQLGLMTTEESVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQ 157
Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FFT SP V G+ + +VAAGG H+ LS
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 37.4 bits (85), Expect = 6.2, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ + E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEEDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4206 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4264
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 4265 CTDKGEVFTWG 4275
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F+LA ++ G++ TWG D Y G + P E V+ A G
Sbjct: 3187 GAQFSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGAL 3241
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3242 HCLAVTDIGQVYAWG 3256
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHC 116
G ALA ++ GK+ +WG +D L G +P + + S + A G H
Sbjct: 3029 GGKHALALTQDGKVFSWGEGED---GKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHS 3085
Query: 117 VSVTEAGEVYTWGWRE 132
++T +GE+YTWG E
Sbjct: 3086 AAITSSGELYTWGLGE 3101
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 2424 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 2482
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 2483 CTEDGEVYTWG 2493
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ +WG D++ + T +H P+ VV AA
Sbjct: 363 DIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVVDVAA 421
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 422 GSTHCLALTEDSEVHSWG 439
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 298 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 352
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + +VK G +++T+ G+VY+WG
Sbjct: 353 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWG 387
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
P+P ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 1224 PLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 1282
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 1283 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 1317
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH +
Sbjct: 2271 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACI 2325
Query: 120 TEAGEVYTWG 129
T AG++Y+WG
Sbjct: 2326 TVAGDLYSWG 2335
>gi|451847555|gb|EMD60862.1| hypothetical protein COCSADRAFT_97314 [Cochliobolus sativus ND90Pr]
Length = 649
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD------ 79
GY E + +L P G S + + G LA ++ G+++ WG D
Sbjct: 484 GYTDNAGAEDASVLQPKIIHSLEGKSVESLAAG-AHHNLAITKDGQVLVWGRCDGAQTGL 542
Query: 80 ---------DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
DE + +GK +P PLP ++V A G H + + + G+ Y+WG+
Sbjct: 543 PPSELDAETDEDKVLKNNGKAKIVVQPTPLPNLKNIVTGACGPDHSIVIDKDGKAYSWGF 602
Query: 131 RECVPSAKVTRD 142
+ + T D
Sbjct: 603 SANYQTGQGTDD 614
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 41 PIPARLCGGDS-WKDVCGG-GCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEP 97
P+PA D+ + DV G C FAL T G + WG+ +EG G H P P
Sbjct: 326 PVPAEFFPEDTTFVDVAAGDSCSFALTTE--GAVYGWGTFRKNEGILGFERGNH-TAPRP 382
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
L T V + G H + + VY WG
Sbjct: 383 VYLDTVKKVTQIVCGTNHVYILDKDRHVYAWG 414
>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
Length = 963
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K++ CG +LA S+ G+L WG D GQ L G+ TPE + +V
Sbjct: 152 KNIIQITCGDYHSLALSKGGELFAWGQNLD-GQ--LGVGRIFASTSTPEIVENLSGVPLV 208
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA-- 165
+ +AG AH ++++ +G VY+WG +C G ++ KDS AL ++
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKDSPSCIEALDDQKVEF 261
Query: 166 -----PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ +V + N + L PCLV G ++T++A G
Sbjct: 262 LACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNE----LRPCLVAGLVGNRVTQIACG 317
Query: 221 GRHTL 225
+HTL
Sbjct: 318 RQHTL 322
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 67/180 (37%), Gaps = 32/180 (17%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETP--EPFPLPTEAS--VVKAAAGWAHCVS 118
L ++ G + +WG SY+ G G +P P L S VV+ A G H ++
Sbjct: 111 VLVLTQDGGVYSWGH-----NSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMA 165
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T GEVYTWG+ C G ST Q + A +KR +
Sbjct: 166 LTTEGEVYTWGYNNC-------------GQIGSGSTANQGSPRKVTACIGNKRIIDITCG 212
Query: 179 RRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + + E G+ +PC V GV I +V G H L L+
Sbjct: 213 QTTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALT 272
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 32/189 (16%)
Query: 11 NEKMEECKETVVYMWGYL------PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--F 62
+ M E VY WGY G++ + SP C G+ K + CG
Sbjct: 161 HHSMALTTEGEVYTWGYNNCGQIGSGSTANQG---SPRKVTACIGN--KRIIDITCGQTT 215
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHCVSVT 120
+L ++SG++ +WG G L G + P + VV A G+AH +++T
Sbjct: 216 SLCVTDSGEVYSWGY---NGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALT 272
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+ G V+ WG +G GS K +T P + A +
Sbjct: 273 DNGVVFGWG----------ANSYGQLGSGNKANT----CTPLQVATRIGRVVCLAATHYS 318
Query: 181 KTSSAREES 189
+S+AR +S
Sbjct: 319 HSSAARNQS 327
>gi|451996623|gb|EMD89089.1| hypothetical protein COCHEDRAFT_1140917 [Cochliobolus
heterostrophus C5]
Length = 636
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD------ 79
GY E + +L P G S + + G LA ++ G+++ WG D
Sbjct: 471 GYTGNAGAEDASVLQPKIIHSLEGKSVESLAAG-AHHNLAITKDGQVLVWGRCDGAQTGL 529
Query: 80 ---------DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
DE + +GK +P PLP +VV A G H + + + G+ Y+WG+
Sbjct: 530 PPSELDAETDEDKVLKNNGKAKIVVQPTPLPNLKNVVTGACGPDHSIVIDKDGKAYSWGF 589
Query: 131 RECVPSAKVTRD 142
+ + T D
Sbjct: 590 SANYQTGQGTDD 601
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 41 PIPARLCGGDS-WKDVCGG-GCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEP 97
P+PA D+ + DV G C FAL T G + WG+ +EG G H P P
Sbjct: 313 PVPAEFFPEDTTFVDVAAGDSCSFALTTE--GAVYGWGTFRKNEGILGFERGNH-TAPRP 369
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
L T V + G H + + VY WG
Sbjct: 370 VYLDTVKKVTQIVCGTNHVYVLDKDRHVYAWG 401
>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Acyrthosiphon pisum]
Length = 4257
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 41 PIPARLCGGDSWKDVCGG-GC-GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
P+P R+ K V GC G +LA S++G++ +WG D + H E P+
Sbjct: 414 PVPKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHKE-PKLI 472
Query: 99 PLPTEASVVK-AAAGWAHCVSVTEAGEVYTWG 129
P V++ +AG+ H +VT G++YTWG
Sbjct: 473 QGPFIGKVIELVSAGYRHSAAVTSDGQLYTWG 504
Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G G +LA +E+G++ +WG D G+ + + P+ + V++ A G H
Sbjct: 3488 GSDGHSLALTETGEVFSWGDG-DFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSA 3546
Query: 118 SVTEAGEVYTWGWRE 132
+++ GEVY +G E
Sbjct: 3547 VLSQDGEVYVFGSAE 3561
>gi|302799471|ref|XP_002981494.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
gi|300150660|gb|EFJ17309.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
Length = 420
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 25/188 (13%)
Query: 43 PARLCGGDSWKDVCGGGCGF-ALATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPL 100
P R+ G +S + G G ++A E G L +WGS+ GQ L G P+
Sbjct: 99 PQRVRGMESTRVRAAAGSGVVSMAICEDGSLWSWGSSK-RGQLGLGLGVTRSLLPQKIHA 157
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
SV++ + GW H ++ T GE+++WG+ D G G L
Sbjct: 158 LAGKSVLQVSLGWGHALACTMDGELFSWGY----------HDSGRLGYL----------L 197
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
P +Q PS + + + R + P LV L KI +VA G
Sbjct: 198 PQDQ--PSMIQPSKNTLDRNDVGEKMLMEQLRKEDAPILQWEPKLVELPEPCKIIQVACG 255
Query: 221 GRHTLILS 228
H+L LS
Sbjct: 256 LDHSLALS 263
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F++ ++ GK+ TWG + Y G + +P P + ++ + A G
Sbjct: 3177 GMHFSVLLTKEGKVYTWGKGE-----YYRLGNDSTSVQPIPTLVDGLASKTITQVAVGAL 3231
Query: 115 HCVSVTEAGEVYTWGWRE 132
HC+++T +GEVY+WG E
Sbjct: 3232 HCLALTSSGEVYSWGDNE 3249
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK----HGETPE-PFPL 100
L G K +CG F++A + +G + TWG D Y G H TP L
Sbjct: 4078 LTGKHVIKLLCGSQ--FSMALTTAGHVYTWGKGD-----YYRLGHGDDSHQRTPRRVLGL 4130
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+V+ G HC+ TE+G+V++WG
Sbjct: 4131 LAHENVIDIGCGSLHCIVCTESGKVFSWG 4159
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
PG+ K P PI K +CG AL ++ GKL +WG D + +
Sbjct: 649 PGSDQNKVP--KPISGIGSTSPVVKIICGNQISMAL--TKDGKLYSWGCGDTYQLGH-GN 703
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+H P+ +E V + G HCV++T +VY WG
Sbjct: 704 QEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G L + SG + +WG D Y G+ G + P+ T V+K
Sbjct: 4034 CGSGDAQTLCATASGCVFSWGDGD-----YGKLGRGGNEGSKVPKKIDSLTGKHVIKLLC 4088
Query: 112 GWAHCVSVTEAGEVYTWG 129
G +++T AG VYTWG
Sbjct: 4089 GSQFSMALTTAGHVYTWG 4106
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 14/118 (11%)
Query: 21 VVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
V+Y WG G + ++ I L G + CG G LA ++G++ +WG
Sbjct: 580 VLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWG 639
Query: 77 SADDEGQSYLTSGKHGETPEPFPLP-----TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D Y G+ G P P + + VVK G +++T+ G++Y+WG
Sbjct: 640 DGD-----YGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWG 692
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA + G+L WG +D G+ L + + P V+ A G +H +T+ G
Sbjct: 3936 LAVTTQGELYAWGEGED-GKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDG 3994
Query: 124 EVYTWG 129
+YTWG
Sbjct: 3995 SLYTWG 4000
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 17/119 (14%)
Query: 22 VYMWGY-----LPGTSPEKSPILSPIPARLCGGDSWKD--VCGGGCGFALATSESGKLIT 74
V+ WG+ L G E + + SP RLC S + + GG A ++ GK+
Sbjct: 3836 VFGWGHNHRGQLGGI--EGNKVKSP---RLCESLSELNPAMITGGEQTLFAVTDDGKVYA 3890
Query: 75 WGSADDEGQSYLTSGKHGETPEPFP-LPTEASVVKAAA---GWAHCVSVTEAGEVYTWG 129
G A G+ + S + TP P L T VK A G HC++VT GE+Y WG
Sbjct: 3891 SGYAA-HGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWG 3948
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4037 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4095
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 4096 CTDKGEVFTWG 4106
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F+LA ++ G++ TWG D Y G + P E ++ A G
Sbjct: 3043 GAQFSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGAL 3097
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3098 HCLAVTDIGQVYAWG 3112
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHC 116
G ALA ++ GK+ +WG +D L G +P + + S + A G H
Sbjct: 2885 GGKHALALTQDGKVFSWGEGED---GKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHS 2941
Query: 117 VSVTEAGEVYTWGWRE 132
++T +GE+YTWG E
Sbjct: 2942 AAITSSGELYTWGLGE 2957
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 19/123 (15%)
Query: 18 KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
+ + VY+WG L G S K P+ S + ++L K V GG S+
Sbjct: 2788 QHSAVYVWGLNDKDQLGGLKG-SKIKLPVYSEVLSKL------KPVHIAGGSKTLFVVSQ 2840
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
GKL G + G+ L + P+P P ++ + K A +G H +++T+ G+V+
Sbjct: 2841 EGKLYACGEGTN-GRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVF 2899
Query: 127 TWG 129
+WG
Sbjct: 2900 SWG 2902
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 62/174 (35%), Gaps = 63/174 (36%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHC 116
G G + SE G + TWG DD L G +G P +V+A G H
Sbjct: 48 GSGHTVVLSEDGAVYTWGRGDD---GRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHT 104
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+VT+ GE+YTWG G + K G +S PT
Sbjct: 105 AAVTDKGELYTWG----------------GGMYGKLGHGNESGHPT-------------- 134
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLV--TLNPGVKITKVAAGGRHTLILS 228
PC+V + G ++T++A G RHT++L+
Sbjct: 135 --------------------------PCMVKHLRDEGARVTQIACGSRHTVVLT 162
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE------ASVVKAAAGWAHCVS 118
A ++ G+L TWG G Y G E+ P P + A V + A G H V
Sbjct: 106 AVTDKGELYTWG-----GGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVV 160
Query: 119 VTEAGEVYTWGWRE 132
+T+ G+VYTWG +E
Sbjct: 161 LTDLGKVYTWGDKE 174
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG + ++ GK+ TWG ++ + + H P +V + AA H
Sbjct: 153 CGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTA 212
Query: 118 SVTEAGEVYTWG 129
++T AGE++TWG
Sbjct: 213 ALTAAGEIFTWG 224
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4512 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4570
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 4571 CTDKGEVFTWG 4581
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F+LA ++ G++ TWG D Y G + P E VV A G
Sbjct: 3507 GAQFSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGAL 3561
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3562 HCLAVTDTGQVYAWG 3576
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHC 116
G ALA ++ GK+ +WG +D L G +P + + S + A G H
Sbjct: 3349 GGKHALALTQDGKIFSWGEGED---GKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHS 3405
Query: 117 VSVTEAGEVYTWGWRE 132
++T +GE+YTWG E
Sbjct: 3406 AAITSSGELYTWGLGE 3421
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 1010 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1068
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 1069 CTEDGEVYTWG 1079
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 857 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 911
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 912 TAAGDLYTWG 921
>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
Length = 743
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 133 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 191
Query: 119 VTEAGEVYTWG 129
+++GEVYTWG
Sbjct: 192 CSDSGEVYTWG 202
>gi|390335480|ref|XP_782620.3| PREDICTED: uncharacterized protein LOC577290 [Strongylocentrotus
purpuratus]
Length = 861
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG F L ESG++ G A++ GQ L +G E P PL +V++ AAG H +
Sbjct: 183 CGEKFTLFLFESGQVAGCG-ANNFGQ--LGNGTRAEMVSPKPLDNPENVIRIAAGSCHSL 239
Query: 118 SVTEAGEVYTWGW-REC--------VPSAKVTR 141
+VT GE+Y WG R C P K TR
Sbjct: 240 AVTATGELYAWGMGRACGSRRDDLLTPQRKTTR 272
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 21/126 (16%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEG 82
+G L P K P L + G D++ + CG +LA S G++ +WGS D+ G
Sbjct: 63 YGQLGHDQPRKRPQL------VSGLDAYS-IINVACGEMHSLALSRWGEVFSWGS-DNYG 114
Query: 83 Q-SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTR 141
Q + G P+ + VV+ AAG H V++T AGE++ WG
Sbjct: 115 QLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWG----------AN 164
Query: 142 DFGSAG 147
DFG G
Sbjct: 165 DFGQLG 170
>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
Length = 725
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 115 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 173
Query: 119 VTEAGEVYTWG 129
+++GEVYTWG
Sbjct: 174 CSDSGEVYTWG 184
>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Length = 1626
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 27/124 (21%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSW---------KDVCGGGCGFALATSE 68
+Y WG+ G P + +P P SW + CG AL T+
Sbjct: 815 LYTWGHSSYGCLGVGPHMTKTATPNPV------SWFVYIRVEVIQVACGRNHSIALTTN- 867
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVY 126
+ +WGS + GQ L +G+ G+ P P + + ++ +V +AG H ++++ +G+++
Sbjct: 868 --GVYSWGS-NHYGQ--LGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLW 922
Query: 127 TWGW 130
TWGW
Sbjct: 923 TWGW 926
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4545 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4603
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 4604 CTDKGEVFTWG 4614
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F+LA ++ G++ TWG D Y G + P E VV A G
Sbjct: 3512 GAQFSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGAL 3566
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3567 HCLAVTDTGQVYAWG 3581
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHC 116
G ALA ++ GK+ +WG +D L G +P + + S + A G H
Sbjct: 3354 GGKHALALTQDGKIFSWGEGED---GKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHS 3410
Query: 117 VSVTEAGEVYTWGWRE 132
++T +GE+YTWG E
Sbjct: 3411 AAITSSGELYTWGLGE 3426
>gi|384489724|gb|EIE80946.1| hypothetical protein RO3G_05651 [Rhizopus delemar RA 99-880]
Length = 427
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+P + + DV GG + A + G L +WG D EG G+ G+ EP +
Sbjct: 70 PVPIKSVIDIDFVDVISGGL-HSFAMTPEGSLFSWGCTD-EG----VLGREGKNDEPVKI 123
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
E + VK AG +++T+ G +YTWG
Sbjct: 124 EIEETFVKVVAGDCINMALTKDGNLYTWG 152
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 16/136 (11%)
Query: 13 KMEECKETVVYMWGYLPGT------SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
M K+ +Y WG G SP S +P+ ++ D+ G +LA
Sbjct: 139 NMALTKDGNLYTWGTYRGADGAFGFSPTLSQQSTPLLFSSLSKETIVDITTG-TNHSLAL 197
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETP---EPFPLPTEASVVKAAAGWAHCVSVTEAG 123
S G+L TWG + S +H + EP L +V AG H ++VT
Sbjct: 198 SADGRLFTWGYGEQGQLGRRISSRHPKDSLRCEPLSL---KNVKLIGAGSYHSLAVTHDN 254
Query: 124 EVYTWG---WRECVPS 136
++Y WG +R+C S
Sbjct: 255 QLYAWGLNNFRQCANS 270
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGS--ADDEGQSYLTSGKHGETPEPFPL 100
P ++ +++ V G C +A ++ G L TWG+ D + + TP F
Sbjct: 120 PVKIEIEETFVKVVAGDC-INMALTKDGNLYTWGTYRGADGAFGFSPTLSQQSTPLLFSS 178
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
++ ++V G H ++++ G ++TWG+ E
Sbjct: 179 LSKETIVDITTGTNHSLALSADGRLFTWGYGE 210
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 92/238 (38%), Gaps = 26/238 (10%)
Query: 11 NEKMEECKETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDV--CGGGCGFALATS 67
N + + ++ WGY G + P + C S K+V G G +LA +
Sbjct: 192 NHSLALSADGRLFTWGYGEQGQLGRRISSRHPKDSLRCEPLSLKNVKLIGAGSYHSLAVT 251
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH-CVSVTEAGEVY 126
+L WG ++ Q + +P PLP + A G H V V EAGEV+
Sbjct: 252 HDNQLYAWG-LNNFRQCANSEEPVIFSPTLVPLPESIGTIVAVDGGEHFTVIVNEAGEVF 310
Query: 127 TWGW---------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
T+G + + K++ SA F K LP P S G E V
Sbjct: 311 TFGRGDANQLGLPEDVIAPLKLSST-ESAFKFIIPVATKVPNLP----PVSQISVGSEFV 365
Query: 178 -----KRRKTSSAREESENPASGDEFFTLSPC-LVTLNPGV-KITKVAAGGRHTLILS 228
S S +G++ PC L N G KI +VAAGG+H++ L+
Sbjct: 366 LTACINGEGYSWGFNSSNAIGNGNDDDEPVPCKLKGKNLGTSKIVRVAAGGQHSVFLT 423
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG R + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-RNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVVAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 44.7 bits (104), Expect = 0.039, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P SP L + A ++CG S + V CGG L E G++ T G A
Sbjct: 4 WGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-A 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWG 109
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
SP++ L IP + V GG FAL S SG + WG ++ GQ L+ K
Sbjct: 180 SPQRVRSLEGIPLA-------QVVAGGAHSFAL--SLSGAVFGWG-MNNAGQLGLSDEKD 229
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P +V+ A G HCV+
Sbjct: 555 GSQFSVALTKSGCVYTWGKGDYHRLGH-GSDDHVRRPRKVAALQGKNVISIATGSLHCVA 613
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 614 CTDQGEVFTWG 624
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTE 121
LA S G++ +WG A+D L G P + + VV AAG AH +T
Sbjct: 402 LALSSEGEVFSWGEAED---GKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITS 458
Query: 122 AGEVYTWG 129
GE++TWG
Sbjct: 459 TGELFTWG 466
>gi|45198474|ref|NP_985503.1| AFL045Cp [Ashbya gossypii ATCC 10895]
gi|44984425|gb|AAS53327.1| AFL045Cp [Ashbya gossypii ATCC 10895]
gi|374108732|gb|AEY97638.1| FAFL045Cp [Ashbya gossypii FDAG1]
Length = 486
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 14/151 (9%)
Query: 21 VVYMWG----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGG-GCGFALATSESGKLITW 75
VVY WG Y G + L + R G D K + G FALA + G+L W
Sbjct: 244 VVYAWGNGQQYQLGRKIMERSRLRTLDPRAFGLDGVKYIASGENHSFALA--DDGRLFAW 301
Query: 76 GSADDEGQSYLTS----GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
G + GQ +++ G P LP + V AAG H + +T+ G++YT+G
Sbjct: 302 G-LNQFGQCGISNEVEDGAMVTVPTEVLLPPDVKVESIAAGEHHSIVLTQDGDLYTFGRL 360
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ D+ S KD GK ++P
Sbjct: 361 DMFEVGISAEDYPE--STYKDVHGKARSVPV 389
>gi|297697477|ref|XP_002825883.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Pongo
abelii]
Length = 376
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + KD+T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLVEDGETVAKDAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ ++T A + + P + F P L+ L G K + G RHT +++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPLGSDAVKASCGSRHTAVVT 316
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 288 QPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGW 326
>gi|145593744|ref|YP_001158041.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303081|gb|ABP53663.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 577
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+ L G D+ GGG +LA + +G L+ WG+ + GQ + TP L
Sbjct: 80 PVEVSLPAGTLLTDIAGGGK-HSLALTSTGSLLAWGN-NANGQLGDGTTTSSNTPVAVDL 137
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P VV AAG H +++T G V WG
Sbjct: 138 PAGTEVVAIAAGNDHSLALTSTGAVLAWG 166
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 68/177 (38%), Gaps = 21/177 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAGWAHC 116
G +LA + +G ++ WG D L G + + TP LPT ++ AAG H
Sbjct: 149 GNDHSLALTSTGAVLAWG---DNSSGQLGDGTNDDRSTPVTVDLPTTSTTTAIAAGSVHS 205
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+S+T G + WG D G G ST K + AG
Sbjct: 206 LSLTSTGSAFAWG----------NNDEGQLGDESTTSTNKPVNVALTTGTTLTAIAGGSA 255
Query: 177 ----VKRRKTSSAREESENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ T+ A + GD T L+P V L G +T +AAG H++ L
Sbjct: 256 HSLGITSDNTAVAWGSNSQGQLGDGTNTNALAPVNVALTTGTTVTAIAAGLLHSVAL 312
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 66/189 (34%), Gaps = 34/189 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +L + + WGS + +GQ + + P L T +V AAG H V
Sbjct: 252 GGSAHSLGITSDNTAVAWGS-NSQGQLGDGTNTNALAPVNVALTTGTTVTAIAAGLLHSV 310
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK------- 170
++ G TWG T G+ + ++ P E + PS
Sbjct: 311 ALLTNGTAATWG-------NNATGQLGNGNNVTSNT-------PVEVSLPSGTTLTAIAA 356
Query: 171 RAGEEVVKRRKTSSAREESEN---------PASGDEFFTLS---PCLVTLNPGVKITKVA 218
+ V T +A +N SGD S P V L+ G +T A
Sbjct: 357 NSSNHTVAITNTETALAWGDNSFGQLGTEVTTSGDVSIASSSNTPVAVNLSTGTTLTNTA 416
Query: 219 AGGRHTLIL 227
G H+L L
Sbjct: 417 VGTNHSLAL 425
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K CG ++A ESG++ WG
Sbjct: 343 VYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGY- 401
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + G+AH + +T+ G++Y WG
Sbjct: 402 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWG------- 452
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+G G+ K + +P E+ D+ TS+A+ +S
Sbjct: 453 ---ANSYGQLGTGNKSNQSYPIPVPVEK----DRIIEIAACHSAHTSAAKTQS 498
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 18 KETVVYMWGYLPGTSPEKS--PILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
K+ V++WG++ EK+ ILSP+P ++ + ++ GG + L + G + W
Sbjct: 460 KDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGG-LDYILVLRKDGNI--W 516
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G +D T + L +V AAG+ H ++V G V++WG
Sbjct: 517 GCGNDFYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWG 570
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA G + +WG A+++GQ L +G + + P + + V AG H ++
Sbjct: 401 GGSHTLAIKRDGTVWSWG-ANNKGQ--LGNGTYKSSYIPTCVKGLNNAVLVEAGSQHSLA 457
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDF 143
V + G V+ WG+ E V S K T+D
Sbjct: 458 VDKDGTVWVWGFIESVWSEKNTKDI 482
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 18 KETVVYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
++ V+ WGY G P + +S +P R+ G + GG ++A ++ G +
Sbjct: 209 RDGTVWSWGYNEDGELGNRPTEDYTVS-VPVRVKGLSDVIAISAGGF-HSIALNKDGAVW 266
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WG E +GK + P + VV AAG+ H +++ + G V+ WG
Sbjct: 267 IWGGGIIE-----KNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWG 317
>gi|380793883|gb|AFE68817.1| RCC1 domain-containing protein 1, partial [Macaca mulatta]
Length = 339
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 41/181 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 129 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 177
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 178 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 227
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 228 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 278
Query: 228 S 228
+
Sbjct: 279 T 279
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VK + G H VT GE+YTWGW
Sbjct: 251 QPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGW 289
>gi|260831025|ref|XP_002610460.1| hypothetical protein BRAFLDRAFT_85599 [Branchiostoma floridae]
gi|229295826|gb|EEN66470.1| hypothetical protein BRAFLDRAFT_85599 [Branchiostoma floridae]
Length = 652
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 57 GGGCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G G +A + G++ WG+ D+ GQ LTS + P P +P A V+K ++G +H
Sbjct: 351 GAGDSHTIALTTDGRVWCWGTFRDNNGQFGLTSDGKVQ-PRPVEIPLSARVLKISSGESH 409
Query: 116 CVSVTEAGEVYTWG 129
+TE G++YT+G
Sbjct: 410 VACLTEDGDLYTFG 423
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P+ V+ A G HCV+
Sbjct: 834 GSQFSVALTASGSVYTWGKGDYHRLGHGTD-DHVRRPKRVAALQGKKVICIAVGSLHCVA 892
Query: 119 VTEAGEVYTWG 129
T+ GEVYTWG
Sbjct: 893 CTDTGEVYTWG 903
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
K V G LA S G++ +WG DD G+ + E P VV A G
Sbjct: 670 KVVVNSGGKHCLALSAEGEVYSWGEGDD-GKLGHGNKSSCERPRVIESLRGKEVVDVACG 728
Query: 113 WAHCVSVTEAGEVYTWG 129
AH +T +GE+YTWG
Sbjct: 729 GAHSACITASGELYTWG 745
>gi|195482065|ref|XP_002101895.1| GE17875 [Drosophila yakuba]
gi|194189419|gb|EDX03003.1| GE17875 [Drosophila yakuba]
Length = 1023
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F++A S G+L TWG A G + HG P +V A AHC
Sbjct: 779 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVHGCSVPRLVSSLQHKRIVDVAVSVAHC 838
Query: 117 VSVTEAGEVYTWG 129
++++ +GEV+ WG
Sbjct: 839 LALSSSGEVFGWG 851
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G G +LA + G + WG D L +G + +P + T V + AG
Sbjct: 728 GSGDAHSLALTSEGLVFAWGDGD---YGKLGNGNCNGSLQPILVETLPRVQRVFAGSQFS 784
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTR 141
V+++ G++YTWG C+ V R
Sbjct: 785 VALSSEGQLYTWGKATCLGHQLVER 809
>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
Length = 409
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 108 CGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCV 166
Query: 118 SVTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 167 CCTEDGEVYTWG 178
>gi|270004502|gb|EFA00950.1| hypothetical protein TcasGA2_TC003860 [Tribolium castaneum]
Length = 161
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
PA + D D+C GG T E GK++++G D+ +T GK P +
Sbjct: 62 PALVQTSDEIVDICAGGMHTVCLTKE-GKILSFGCNDEGALGRITEGKEDAESTPGEVEL 120
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWG-WRECVPSAKVTR 141
V++ AG +H ++ + G V+ WG +RE KV +
Sbjct: 121 PGKVIQITAGDSHSAALLDDGRVFAWGTFREFESGLKVKK 160
>gi|302760337|ref|XP_002963591.1| hypothetical protein SELMODRAFT_404893 [Selaginella moellendorffii]
gi|300168859|gb|EFJ35462.1| hypothetical protein SELMODRAFT_404893 [Selaginella moellendorffii]
Length = 420
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 76/192 (39%), Gaps = 33/192 (17%)
Query: 43 PARLCGGDSWKDVCGGGCGF-ALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPL 100
P R+ G +S + G G ++A E G L +WGS+ GQ L G P+
Sbjct: 99 PQRVRGMESTRVRAAAGSGVVSMAICEDGSLWSWGSSK-RGQLGLGLGVTSSLLPQKIHA 157
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
SV++ + GW H ++ T GE+++WG+ D G G L
Sbjct: 158 LAGKSVLQVSLGWGHALACTMDGELFSWGY----------HDSGRLGYL----------L 197
Query: 161 PTEQA----PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
P +Q P D +V ++ R+E P LV L KI +
Sbjct: 198 PQDQTLMIQPSKDSLDHNDVGEKMLMEQLRKEDA------PILQWEPKLVKLPEPSKIVQ 251
Query: 217 VAAGGRHTLILS 228
VA G H+L LS
Sbjct: 252 VACGLDHSLALS 263
>gi|75076912|sp|Q4R828.1|RCCD1_MACFA RecName: Full=RCC1 domain-containing protein 1
gi|67968774|dbj|BAE00744.1| unnamed protein product [Macaca fascicularis]
Length = 376
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 41/181 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 S 228
+
Sbjct: 316 T 316
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VK + G H VT GE+YTWGW
Sbjct: 288 QPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGW 326
>gi|300175557|emb|CBK20868.2| unnamed protein product [Blastocystis hominis]
Length = 1013
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQ 83
G+L S E++PI PIP + G + D+ CG L + G+LI +GS ++ G+
Sbjct: 301 GFLRPNSRERNPI--PIPTIVPGVE---DIAEISCGKDHTLCLTRDGRLIVFGS-NEYGE 354
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
L+ P P+P +VK AAG H + + E G +YT G
Sbjct: 355 LGLSKSTRYTAPVEVPMPCR--IVKIAAGSHHSLVLDETGALYTSG 398
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALASDGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S AS +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALASDGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 37.7 bits (86), Expect = 5.1, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
L VV + G H +T++G V+T+G
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
>gi|402914058|ref|XP_003919452.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Papio
anubis]
gi|402914060|ref|XP_003919453.1| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Papio
anubis]
Length = 376
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 41/181 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 S 228
+
Sbjct: 316 T 316
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VK + G H VT GE+YTWGW
Sbjct: 288 QPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGW 326
>gi|427797227|gb|JAA64065.1| Putative alpha-tubulin suppressor, partial [Rhipicephalus
pulchellus]
Length = 606
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 66/179 (36%), Gaps = 30/179 (16%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
LA +ESG+L++WG + Q G P V + A G H +++T
Sbjct: 163 VLAVTESGELLSWGH-NGYCQLGNNCNTQGLVPSSISAGLSHRVAQVACGSHHSLALTTN 221
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS---DKRAGEEVVKR 179
G+VY WG C G GS G + PT + S +R +
Sbjct: 222 GDVYAWGQNNC----------GQVGS------GSTTNQPTPRKVSSGIGGRRCIGVACGQ 265
Query: 180 RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + E E G+ SPC VT GV I KV G HT+ LS
Sbjct: 266 TSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALS 324
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WG G S P P ++ G + G CG ++A E+G++ WG
Sbjct: 224 VYAWGQNNCGQVGSGSTTNQPTPRKVSSGIGGRRCIGVACGQTSSMAVMENGEVFGWGY- 282
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G + P + VV K G+AH +++++ G +YTWG
Sbjct: 283 --NGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWG 333
>gi|302565090|ref|NP_001180861.1| RCC1 domain-containing protein 1 [Macaca mulatta]
Length = 376
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 41/181 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 S 228
+
Sbjct: 316 T 316
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VK + G H VT GE+YTWGW
Sbjct: 288 QPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGW 326
>gi|91089971|ref|XP_973774.1| PREDICTED: similar to regulator of chromosome condensation
[Tribolium castaneum]
gi|270013683|gb|EFA10131.1| hypothetical protein TcasGA2_TC012311 [Tribolium castaneum]
Length = 477
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
FALA ++ G++ WG+A+ + + + + P VV AAG + C+++ E
Sbjct: 307 FALALNDRGEVFGWGNAEYDQIPTINNEQQVSNPVHLKHLKVGKVVDVAAGGSFCLALNE 366
Query: 122 AGEVYTWGW 130
GEV+ WG+
Sbjct: 367 HGEVFVWGY 375
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 24/130 (18%)
Query: 22 VYMWG-----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
V+ WG +P + E+ + +P+ + DV GG F LA +E G++ WG
Sbjct: 317 VFGWGNAEYDQIPTINNEQQ-VSNPVHLKHLKVGKVVDVAAGG-SFCLALNEHGEVFVWG 374
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPT----------EASVVKAAAGWAHCVSVTEAGEVY 126
L K +T P LP VV+ A G ++ ++VT G+VY
Sbjct: 375 YG-----LVLGGPKAEQTSRPRKLPEVLFGRNDFQPNNRVVQVACGLSYAMAVTSLGDVY 429
Query: 127 TWG--WRECV 134
WG R C+
Sbjct: 430 AWGRNMRGCL 439
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 5/171 (2%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG +LA S+ G+L +WG+ D + T+ P + +++ + G HC+
Sbjct: 92 CGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCM 151
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G+ +TWG + ++F S S Q+ +P Q + +
Sbjct: 152 ALAADGQFFTWGQNRH-GQLGLGKEFPSQASPQR--VKSLEGIPLAQVAAGGAHSFALSL 208
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
R + DE SPC V L K+ ++ G HT +L+
Sbjct: 209 SGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLT 259
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 91/229 (39%), Gaps = 50/229 (21%)
Query: 25 WGY----LPG--TSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
WGY PG +S + + P S K+V CGG L E G++ T GS
Sbjct: 4 WGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLL--EDGEVYTCGS 61
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 62 -NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWG-------- 110
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
GS G +T A+P K+ ++++ + S A+ +
Sbjct: 111 -----AGSDGQLGHTTTEDSVAIPR-----LIKKLNQQMI--LQVSCGNWHCMALAADGQ 158
Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FFT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS 207
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALASDGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 40.0 bits (92), Expect = 0.88, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHVREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S AS +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALASDGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
L VV + G H +T++G V+T+G
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
>gi|336466175|gb|EGO54340.1| hypothetical protein NEUTE1DRAFT_131894 [Neurospora tetrasperma
FGSC 2508]
gi|350286974|gb|EGZ68221.1| RCC1/BLIP-II [Neurospora tetrasperma FGSC 2509]
Length = 617
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Query: 56 CGGGCGFALATSESGKLITWGSAD------------DEGQSYLTSGKHGETPEPFPLP-T 102
GG +LAT++ G+L+TWG D +E + K +P +P
Sbjct: 482 IAGGEHHSLATNDKGELLTWGRIDGHQVGHPSGSFTEENTIFDEKDKPRILVQPAVVPDI 541
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
E +V AAG H ++TE G+VY+WG+ + + T D
Sbjct: 542 EGKIVHVAAGTDHSFAITEDGKVYSWGFSANYQTGQGTTD 581
>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
Length = 328
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASV 106
+ VC CG F+LA ++SG + TWG D Y G H P+ +
Sbjct: 243 QGVCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKI 297
Query: 107 VKAAAGWAHCVSVTEAGEVYTWG 129
V A G HC++VT++G+VY WG
Sbjct: 298 VHVAVGALHCLAVTDSGQVYAWG 320
>gi|168058364|ref|XP_001781179.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667416|gb|EDQ54047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 466
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 14/189 (7%)
Query: 43 PARLCGGDSWKDVCGGGCGF-ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
P R+ G +S + V G G ++A + G L TWG + T + +TP+
Sbjct: 126 PQRVRGLESVEVVSARGSGVVSMAIARDGSLWTWGKSKRGQLGLGTKIMYAQTPKRVEAL 185
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
VV+ A GW H ++ T G VY+WG+ G G DS ++++
Sbjct: 186 VGQQVVQVALGWGHALARTAEGHVYSWGYAAN----------GRLGFQLSDSESAETSVK 235
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ +P + R E ++ E+ E S P + +T+++ G
Sbjct: 236 -KTSPTAIARVDNESIEEAAYRQVLEDMEKEKS--PVLAWEPVRINSLCSQHVTEISCGM 292
Query: 222 RHTLILSGK 230
H+L L+ K
Sbjct: 293 DHSLTLNEK 301
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 21/136 (15%)
Query: 8 REENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPAR---LCGGDSWKDVCGGGCGFAL 64
R +NE +EE V L EKSP+L+ P R LC + CG +L
Sbjct: 244 RVDNESIEEAAYRQV-----LEDMEKEKSPVLAWEPVRINSLCSQHVTEISCG--MDHSL 296
Query: 65 ATSESGKLITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
+E G+L ++G +A QS + + ++ E + E V+ AG
Sbjct: 297 TLNEKGELCSFGDNSLGQLGRSTAISAVQSSIFAVENSEDHVQGLIRGE-KVLHVGAGLG 355
Query: 115 HCVSVTEAGEVYTWGW 130
H ++VT G +Y+WGW
Sbjct: 356 HSLAVTAQGSIYSWGW 371
>gi|85097594|ref|XP_960475.1| hypothetical protein NCU05513 [Neurospora crassa OR74A]
gi|28921967|gb|EAA31239.1| hypothetical protein NCU05513 [Neurospora crassa OR74A]
Length = 618
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Query: 56 CGGGCGFALATSESGKLITWGSAD------------DEGQSYLTSGKHGETPEPFPLP-T 102
GG +LAT++ G+L+TWG D +E + K +P +P
Sbjct: 483 IAGGEHHSLATNDKGELLTWGRIDGHQVGHPSGSFTEENTIFDEKDKPRILVQPAVVPDI 542
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
E +V AAG H ++TE G+VY+WG+ + + T D
Sbjct: 543 EGKIVHVAAGTDHSFAITEDGKVYSWGFSANYQTGQGTTD 582
>gi|383847394|ref|XP_003699339.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Megachile
rotundata]
Length = 522
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 27/204 (13%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+ + S +L P + G + K + G LA ++ GK+ +WG +D GQ L +G +
Sbjct: 56 ADDISNMLGPTKIEVLCGKNIKTLAVGR-DHLLALTKQGKVYSWG-CNDHGQ--LGNGCY 111
Query: 92 GETPEPF---PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDFGS 145
+ EP + +V A G + +++T+ GEVY+WG + E VP F S
Sbjct: 112 LSSTEPALVKIIKNNEHIVYIACGSDYSIALTKIGEVYSWGNIGYSENVPRQVQIDGFDS 171
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-PC 204
+ + KR + + + S + S + + S PC
Sbjct: 172 KVT----------------SVACAKRFIIMITENGEVYSWGDNSSDQLRTRYYSNQSKPC 215
Query: 205 LVTLNPGVKITKVAAGGRHTLILS 228
VT G+ I KV G H L LS
Sbjct: 216 KVTALVGIVIKKVVCGSSHVLALS 239
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 272 CGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCV 330
Query: 118 SVTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 331 CCTEDGEVYTWG 342
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 120 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 174
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 175 TAAGDLYTWG 184
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP ++ G K CG ++A ESG++ WG
Sbjct: 174 VFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKIATTIACGQMCSMAVVESGEVYVWGY- 232
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V K G+AH + +T+ G +Y WG
Sbjct: 233 --NGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWG------- 283
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT + D+ TS+A+ +S
Sbjct: 284 ---------ANSYGQLGTGNKSNQSYPTPVSVEKDRVIEIAACHSAHTSAAKTQS 329
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP ++ K V G CG ++A ++G++ WG
Sbjct: 148 VYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGY- 206
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + G+AH +++T+ G +Y WG
Sbjct: 207 --NGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWG 257
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVTAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG 109
Score = 37.7 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVTAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T+ G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSC 271
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP ++ K V G CG ++A ++G++ WG
Sbjct: 148 VYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGY- 206
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + G+AH +++T+ G +Y WG
Sbjct: 207 --NGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWG 257
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP ++ K V G CG ++A ++G++ WG
Sbjct: 148 VYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGY- 206
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + G+AH +++T+ G +Y WG
Sbjct: 207 --NGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWG 257
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 855 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 913
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 914 GSTHCLALTEDSEVHSWG 931
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 790 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 844
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 845 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 879
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 46.2 bits (108), Expect = 0.013, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 94 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 153
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 154 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 210
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 211 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 262
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 8 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 64
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 65 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 113
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 114 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 162
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 163 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 210
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 184 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 241
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 242 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 275
>gi|410907970|ref|XP_003967464.1| PREDICTED: RCC1 domain-containing protein 1-like [Takifugu
rubripes]
Length = 308
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 44/172 (25%)
Query: 63 ALATSESGKLITWG--SADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAGWAH 115
+ S +G + TWG S G LTS E P EA V A GW H
Sbjct: 107 VMLLSATGAVYTWGLGSHGQLGHGVLTS-------EEKPRAVEALWGMPMVCVATGGW-H 158
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V +++ G++Y WGW E +G S + LP + +P +AG
Sbjct: 159 SVCISDGGDLYVWGWNE-------------SGQLGLPSRSLRKTLPQQSSP----KAG-- 199
Query: 176 VVKRRKTSSAREESENPASGDEFFT---LSPCLVTLNPGVKITKVAAGGRHT 224
SS+ EE++ +E F P L+ ++P +I V+ G RHT
Sbjct: 200 -------SSSTEETQEGDKHEEVFISIQAFPALLDVSPSCEIMAVSCGSRHT 244
>gi|402873781|ref|XP_003900735.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Papio anubis]
Length = 398
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 64 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 122
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 123 GSTHCLALTEDSEVHSWG 140
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G LA +E+G++ +WG D Y G+ G +TP+ + VVK
Sbjct: 16 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 70
Query: 112 GWAHCVSVTEAGEVYTWG 129
G +++T+ G+VY+WG
Sbjct: 71 GSQFSIALTKDGQVYSWG 88
>gi|307189041|gb|EFN73540.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 491
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 18/130 (13%)
Query: 10 ENEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALA 65
+N M K+ +VY GY L G + E LCG + C C A
Sbjct: 44 DNAAMIVTKDKMVYGLGYNGHGLLGINDENDIFPPKKIEELCGKNIKTFCCYDSCSPVFA 103
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEP---FPLPTEA---SVVKAAAGWAHCVSV 119
+E GK+ +WGS D K G +P LPT+ + A H +++
Sbjct: 104 LTEEGKIYSWGSNIDR--------KLGLDLKPSRKIYLPTKVINEECIDIACSSDHALAL 155
Query: 120 TEAGEVYTWG 129
T+ G++YTWG
Sbjct: 156 TKDGKIYTWG 165
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 46.2 bits (108), Expect = 0.013, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 46.2 bits (108), Expect = 0.013, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAH 115
CG +LA S+ G+L +WG+ D GQ LT+ + T P + ++++ + G H
Sbjct: 90 ACGESHSLALSDQGQLFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH 148
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
C+++ G+ +TWG + + ++ S S Q+ +P Q +
Sbjct: 149 CLALAADGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPLAQVAAGGAHSFAL 205
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + S DE SPC V L K+ ++ G HT +L+
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
Score = 37.7 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
SP++ L IP + GG FAL S SG + WG + GQ L+ +
Sbjct: 180 SPQRVKSLDGIPLA-------QVAAGGAHSFAL--SLSGAVFGWGK-NSSGQLGLSDERD 229
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 230 RESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|255567172|ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis]
gi|223536120|gb|EEF37775.1| cell cycle regulatory protein, putative [Ricinus communis]
Length = 441
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 21/164 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A + G L WG + GQ L G P + K + GW H ++++E G
Sbjct: 136 AIANDGSLWVWGKSK-RGQLGLGKGITEAFVPSKIEALAGTKIAKVSFGWGHALALSEEG 194
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
+++ WG+ ++ + G+ DS Q Q P A E +V
Sbjct: 195 KLFGWGYS---ADGRLGKIMGALEVSALDSNANQ------QVPKLMLEASERLV----LE 241
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+E++ P D PCLV G K+ +A G H+L+L
Sbjct: 242 GMEKENDMPILWD------PCLVEELHGTKVVDIACGLDHSLVL 279
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 701 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 759
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 760 GSTHCLALTEDSEVHSWG 777
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +++G++ +WG D Y G+ G +T
Sbjct: 636 IPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGD-----YGKLGRGGSDGCKT 690
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 691 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 725
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1173
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G GF++A + G L +WG + GQ +TS P P + V+A+AG +H
Sbjct: 769 GYGFSVALASDGSLYSWGD-NSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHV 827
Query: 117 VSVTEAGEVYTWG 129
V+++ G +YTWG
Sbjct: 828 VALSSDGNIYTWG 840
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G +A G + TWG T+ + P P + +A+AG +H V+
Sbjct: 877 GQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSVA 936
Query: 119 VTEAGEVYTWG 129
V++ G +YTWG
Sbjct: 937 VSDDGSIYTWG 947
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
GGG +ALA GKL WG + GQ + + +P P E VV+ A GW H
Sbjct: 307 VGGGIQWALAAD--GKLYGWG-WNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRH 363
Query: 116 CVSVTEAGEVYTWG 129
+++TEA V++WG
Sbjct: 364 TLALTEAKNVFSWG 377
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 74/189 (39%), Gaps = 36/189 (19%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKA 109
+CG A + E +L +WG D HG + + F P P +A + +
Sbjct: 82 ICGADHTTAYSDEEL-QLYSWGWGD------FGRLGHGNSSDVFNPQPIQALQGVRITQI 134
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G +HC++VT AG V++WG + G +T + S LP +
Sbjct: 135 ACGDSHCLAVTVAGHVHSWGRNQ-------------NGQLGLGNT-EDSLLPQKIQAFEG 180
Query: 170 KRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAA 219
R T++ E+ + N GD L P V+ G K+ VA
Sbjct: 181 VRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVAC 240
Query: 220 GGRHTLILS 228
G RHT+ +S
Sbjct: 241 GWRHTITVS 249
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Query: 18 KETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
+E +Y WG + S + +P P + G + CG LA + +G +
Sbjct: 94 EELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA---CGDSHCLAVTVAGHV 150
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 151 HSWGR-NQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGW 207
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 39.3 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 39.3 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 38.9 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Hydra magnipapillata]
Length = 364
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 17/131 (12%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + VY G+ G S + I +LC D + G G LA
Sbjct: 32 NEALLTLTNGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMG-PHVLAV 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPE----PFPLPTEASVVKAAAGWAHCVSVTEA 122
++SG+L +WG G+ G T E P + + V++ A G H +++TE
Sbjct: 91 TDSGELYSWGHGG--------YGQLGHTSEEKSKPVLVYMQKKVIQVACGSYHSIALTED 142
Query: 123 GEVYTWGWREC 133
GEVY WG C
Sbjct: 143 GEVYAWGSNNC 153
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 18/118 (15%)
Query: 22 VYMWGY-----LPGTSPEKS-PILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
+Y WG+ L TS EKS P+L + K V CG ++A +E G++
Sbjct: 96 LYSWGHGGYGQLGHTSEEKSKPVLVYMQ---------KKVIQVACGSYHSIALTEDGEVY 146
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
WGS ++ GQ L + TP+ L +V + G + V +T GE+Y+WG+
Sbjct: 147 AWGS-NNCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWGYN 203
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 37 PILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
PILS IP+ L V GG AL T +G + G G L G T E
Sbjct: 8 PILSFIPSSLATKVKKAFVFGGAGNEALLTLTNGDVYALGF---NGNGCLGVGDGSSTLE 64
Query: 97 PFPLPT--EASVVKAAAGWA-HCVSVTEAGEVYTWG 129
P + + +V+ A G H ++VT++GE+Y+WG
Sbjct: 65 PKIIEQLCQKDIVQLAYGMGPHVLAVTDSGELYSWG 100
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A S +G L TWG D + S +H P+P +V+ + G H ++
Sbjct: 3799 GSQFSVALSANGTLYTWGKGDYFRLGH-GSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLA 3857
Query: 119 VTEAGEVYTWG 129
+T+ GEVY WG
Sbjct: 3858 LTDDGEVYAWG 3868
Score = 42.7 bits (99), Expect = 0.15, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSY---LTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G F++A + +G++ TWG +G+ Y L G+H P ++ A G H
Sbjct: 2846 GAQFSVALTATGQVWTWG----KGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLH 2901
Query: 116 CVSVTEAGEVYTWG 129
C++V+ G+VY WG
Sbjct: 2902 CIAVSTQGDVYCWG 2915
Score = 42.0 bits (97), Expect = 0.27, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 64 LATSESGKLITWG----SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
LA ++ G++ +WG A GQ Y + TPEP ++ VV + G C +V
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSF----PTPEPIVAFSKLIVVMVSCGKDFCAAV 560
Query: 120 TEAGEVYTWG 129
TE G++Y WG
Sbjct: 561 TEDGKLYMWG 570
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 22/106 (20%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP + P LS + S G A+A S GK+++WG +D GK
Sbjct: 2667 SSPRQIPGLSQFVIKTVAVHS-------GGKHAMALSLDGKVLSWGDGED--------GK 2711
Query: 91 --HGE-----TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
HG+ TP+ V A G AH ++T GE+YTWG
Sbjct: 2712 LGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWG 2757
Score = 37.7 bits (86), Expect = 4.8, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA S +G++ WG DD G+ L + P+ ++ ++ A G H +++ G
Sbjct: 3646 LALSTTGEVYAWGDGDD-GKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYG 3704
Query: 124 EVYTWG 129
+YTWG
Sbjct: 3705 HLYTWG 3710
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ + E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEEDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 37.4 bits (85), Expect = 6.2, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ + E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEEDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|407002778|gb|EKE19448.1| hypothetical protein ACD_9C00014G0001, partial [uncultured
bacterium]
Length = 691
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Query: 22 VYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF---ALATSESGKLITWGS 77
VY WGY + S S +P R+ +W G +LA +G + +WGS
Sbjct: 351 VYAWGYNINNQLGNNSSTNSSVPVRVGVEGAWLSGAAAVTGMNYSSLALMNNGTVWSWGS 410
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
++ GQ L G G P + +V +G +H +++T G+VYTWG+
Sbjct: 411 -NNVGQ--LGLGSVGTQVVPAQISNFTNVKAIRSGTSHVIALTNDGDVYTWGYNNV 463
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG-WAHCVSVTE 121
A A ++ GK+ WGS G+ L G+ E P +P VV AAG H +++
Sbjct: 240 AFALTKDGKVYAWGSG---GRLGLGVGEIAEKYVPVEIPNLTDVVSIAAGSGGHVLALKS 296
Query: 122 AGEVYTWG 129
G+VY WG
Sbjct: 297 NGDVYAWG 304
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 39/153 (25%)
Query: 13 KMEECKETVVYMWG----YLPGTS-PEKS--PILSPIPA--------RLCGGDS------ 51
+ + KE+ VY+WG Y G S PEK P L+P A RL GDS
Sbjct: 398 QTDHVKESHVYVWGSNSSYQLGISEPEKMLIPHLTPSFANSEQGNYGRLGLGDSSNQNRP 457
Query: 52 ----WKDVCG--------GGCGFALATSESGKLITWGSADDEGQSYLTSGKH--GETPEP 97
++ C G G LA + G++ +WG D L G H ++P+
Sbjct: 458 KLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGD---YGKLGHGNHVTQKSPKL 514
Query: 98 FPLPTEASVVKA-AAGWAHCVSVTEAGEVYTWG 129
P + VV+ A G+ H ++T G +YTWG
Sbjct: 515 ILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWG 547
Score = 37.0 bits (84), Expect = 8.7, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
K +C G F LA ++ GK+ + G G + + P+ +E + AAG
Sbjct: 3652 KKICCGA-RFTLALTKEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAG 3710
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +++T+ G+V++WG
Sbjct: 3711 YEHALALTKEGDVWSWG 3727
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 5/178 (2%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 131 QNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 190
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S S Q+ +P Q
Sbjct: 191 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQR--VRSLEGIPLAQVAAGGA 247
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + + + DE SPC V L K+ ++ G HT +L+
Sbjct: 248 HSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 305
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ + E+P
Sbjct: 227 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFAWG-MNNAGQLGLSDEEDRESPCHVK 284
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 285 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 318
>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 579
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 74/197 (37%), Gaps = 26/197 (13%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+ A + G + V GG +LA + G ++ WG A+ GQ + TP +
Sbjct: 241 PVAADVPAGTTITAVAAGGL-HSLALTSGGDVLAWG-ANGSGQLGDGTTTSSSTPVAVDV 298
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P +V AAG H ++VT AG+V WG +AG ST S+
Sbjct: 299 PAGTTVTAVAAGGRHSLAVTSAGDVLAWGDN-------------TAGQLGDGST-THSST 344
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF----------TLSPCLVTLNP 210
P P+ + + A GD F ++ P V L
Sbjct: 345 PVAVNVPAGTTITAVATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSSIIPVAVDLPA 404
Query: 211 GVKITKVAAGGRHTLIL 227
G +T +A G H+L +
Sbjct: 405 GTTVTAIAGGSFHSLAI 421
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 80/207 (38%), Gaps = 42/207 (20%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE-GQSYLTSGKHGETPEPF 98
+P+ + G + + GGG LA + +G + WG D+ GQ S TP
Sbjct: 136 TPVAVDVPAGTTVTALSGGGV-HNLAVTSAGTALAWG--DNFWGQLGDGSTTRSRTPVAV 192
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
+P ++ AAG H ++VT AG WG S+G D T S
Sbjct: 193 NVPAGTTITAVAAGQGHSLAVTSAGTALAWGDN-------------SSGQL-GDGTATDS 238
Query: 159 ALPTEQAPPSDK---------------RAGEEVVKRRKTSSAREESENPASGDEFFTLS- 202
++P P+ +G +V+ S + GD T S
Sbjct: 239 SIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQL-------GDGTTTSSS 291
Query: 203 -PCLVTLNPGVKITKVAAGGRHTLILS 228
P V + G +T VAAGGRH+L ++
Sbjct: 292 TPVAVDVPAGTTVTAVAAGGRHSLAVT 318
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 81/209 (38%), Gaps = 28/209 (13%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ + S SP+ + G + V GG G +LA + +G + WG D L G
Sbjct: 76 GTTTDSS---SPVSVNVPAGTTITAVAGG-AGHSLAVTSAGTALAWG---DNAFGQLGDG 128
Query: 90 K---HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDF 143
TP +P +V + G H ++VT AG WG W +
Sbjct: 129 TTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQL---------- 178
Query: 144 GSAGSFQKDSTGKQSALP--TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
GS + T +P T + + V T+ A ++ + GD T
Sbjct: 179 -GDGSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTATD 237
Query: 202 S--PCLVTLNPGVKITKVAAGGRHTLILS 228
S P + G IT VAAGG H+L L+
Sbjct: 238 SSIPVAADVPAGTTITAVAAGGLHSLALT 266
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 3/166 (1%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA S+ G+L +WG+ D +T+ P + ++++ + G HC+++
Sbjct: 96 SLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD 155
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G+ +TWG + + ++F S S Q+ + +P Q + +
Sbjct: 156 GQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALSLSGAVF 212
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ DE SPC V L K+ ++ G HT +L+
Sbjct: 213 GWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 55/234 (23%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITW 75
+ WGY P S L I A ++CG S + V CGG ++ E G++ T
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGN--HSVFLLEDGEVYTC 58
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
G + +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 59 G-LNTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------ 109
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENP 192
S G+ + TE + P ++ ++ + + S
Sbjct: 110 ---------------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLAL 152
Query: 193 ASGDEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
A+ +FFT SP V G+ + +VAAGG H+ LS
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4149 GSQFSVALTRSGSIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4207
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 4208 CSDKGEVFTWG 4218
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F+LA ++ G++ TWG D Y G + P E V+ A G
Sbjct: 3162 GAQFSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGAL 3216
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3217 HCLAVTDTGQVYAWG 3231
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G L + SG + +WG D Y G+ G +TP+ + +V K
Sbjct: 617 CGSGDSQTLCVTASGIVFSWGDGD-----YGKLGRGGCNGSKTPKIVDKLLDINVAKVYC 671
Query: 112 GWAHCVSVTEAGEVYTWG 129
G ++T GEVYTWG
Sbjct: 672 GGQFSAALTAYGEVYTWG 689
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHC 116
G ALA ++ G++ +WG +D L G +P + + S + A G H
Sbjct: 3004 GGKHALALTQDGRVFSWGEGED---GKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHS 3060
Query: 117 VSVTEAGEVYTWGWRE 132
++T +GE+YTWG E
Sbjct: 3061 AAITSSGELYTWGLGE 3076
>gi|148234769|ref|NP_001090058.1| uncharacterized protein LOC735132 [Xenopus laevis]
gi|66911611|gb|AAH97888.1| MGC115671 protein [Xenopus laevis]
Length = 449
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA SE G+L WG+++ + +T P P V + A G C++V E G
Sbjct: 281 LAVSEEGQLFGWGNSEYMQLACVTDSTQVNVPRYLPFQHVGRVKQVACGGTGCIAVNEDG 340
Query: 124 EVYTWGW 130
V+ WG+
Sbjct: 341 SVFVWGY 347
>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60462899|gb|EAL61096.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 455
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 17/131 (12%)
Query: 9 EENEKMEECKETVVYMWGYLPGTSPEKSPILS--------PIPARLCGGDSWKDVCGGGC 60
E+NE + VYMWG KS +S P L + V GG
Sbjct: 99 EQNEN-DPTISNKVYMWG------TNKSGNMSLPSEQYRFPTTIDLLKNTFVEKVIGGRS 151
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
F L + GK++ +G ++ GQ L ++ P P ++ G H ++VT
Sbjct: 152 -FTLVLTRDGKVLGFGE-NNFGQLGLGDTRNRTAPTPVETLNNQHIIDIGVGLDHSIAVT 209
Query: 121 EAGEVYTWGWR 131
+AG V+ WG+
Sbjct: 210 KAGHVFGWGYN 220
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WG+ G TS + T + + +VK AAG +H +++ + G VYTWG
Sbjct: 356 WGTEGRLGLGMDTSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRVYTWG 410
>gi|242019440|ref|XP_002430169.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515260|gb|EEB17431.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 364
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 12/70 (17%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPE----PFPLPTEASVVKAAAGWAHCVSVTEA 122
++ G LITWG D G+ GE E P PL + + + + G H V++TE+
Sbjct: 265 TDEGHLITWGRND--------LGQLGEERENAWVPSPLKSLNRIKQISLGSHHSVALTES 316
Query: 123 GEVYTWGWRE 132
G V+TWGW E
Sbjct: 317 GTVFTWGWNE 326
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G V++T+ G+VY+WG
Sbjct: 649 PKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 683
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 90/235 (38%), Gaps = 47/235 (20%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P L + CG + + V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEPKLI---SAFCGKQAGQRVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKS 231
K + S + +++ G E P L+ G K+ VAAG H L L+ S
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDS 729
>gi|301120392|ref|XP_002907923.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262102954|gb|EEY61006.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 255
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG F L +++GKL+TWG GQ L + P+ P P A V A G H +
Sbjct: 140 CGWHFVLCLTDTGKLVTWGKG-SHGQLGLGGFDNAYEPQVVPFPHTARHV--ACGSEHSM 196
Query: 118 SVTEAGEVYTWGWRE 132
VT +G++YT GW E
Sbjct: 197 VVTTSGDLYTCGWGE 211
>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
rubripes]
Length = 531
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 31/186 (16%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT---EASVVKAAAGWAHCVSVT 120
L +E G+L WG G S L +G + P + V + A G H +++T
Sbjct: 88 LLATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALT 144
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
++GEVY WG+ C G GS ST Q P + R +V +
Sbjct: 145 DSGEVYAWGYNNC----------GQVGS---GSTANQPT-PRRVSSCLQNRVAVSIVCGQ 190
Query: 181 KTSSAREE-----------SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSG 229
+S A + + G+ L+PC + G+ + +V +G H+L L+
Sbjct: 191 TSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTD 250
Query: 230 KSLESA 235
+ L A
Sbjct: 251 EGLLYA 256
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P R+ + CG +LA ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWG-Y 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V + +G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWG 258
>gi|380018612|ref|XP_003693221.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
florea]
Length = 541
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 79/207 (38%), Gaps = 18/207 (8%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS--ADDEGQSYLT 87
GT +S + LCG D K G LA ++ GK+ +WG + G ++
Sbjct: 57 GTGDTQSTLYPKKIKELCGKDI-KTFAYGKGPHVLALTKEGKVYSWGQNCHYELGNTF-- 113
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE-----CVPSAKVTRD 142
G TP +V A G H +++T GEVY WG C + +D
Sbjct: 114 -GSQALTPAIITNLCNEFIVDVACGSHHSLALTNDGEVYAWGQNTSGQVGCHDITTLVQD 172
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE-EVVKRRKTSSAREESENPASGDEFFTL 201
+F TGK+ + S EV + + EN + D+F
Sbjct: 173 IPRKLNFTL--TGKKVICISCGDSFSVVVTNNGEVYSWGRNDVGQLGIENN-NNDQF--- 226
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS 228
PC +T V I KV G HTL LS
Sbjct: 227 HPCRITALTKVVIEKVVCGSIHTLALS 253
>gi|414870472|tpg|DAA49029.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 469
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 40/168 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K +P P +V+AA G HC++V +
Sbjct: 89 SLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDN 148
Query: 123 GEVYTWGWRECVPSAKVT--RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G Y WG P+ VT ++G G P K G ++R
Sbjct: 149 GHAYAWGRGTRFPAFSVTGGNEYGQCGE-----------------EPERKEDGTRALRRD 191
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ R P +K+ +VAAGG H+++L+
Sbjct: 192 IPTPQR---------------------CAPKLKVRQVAAGGTHSVVLT 218
>gi|255089166|ref|XP_002506505.1| predicted protein [Micromonas sp. RCC299]
gi|226521777|gb|ACO67763.1| predicted protein [Micromonas sp. RCC299]
Length = 401
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
VY WG G+ EK P SP+ G + G ALA E G++ +WG+ D
Sbjct: 141 VYTWGQTVGS--EKEPARSPVRVPGIKGVT---TLAAGMFHALALQEDGRVFSWGNGD-Y 194
Query: 82 GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GQ L + +TP + A V AAG H +VT G Y WG
Sbjct: 195 GQLGLGRPGNEDTPTEVEALSRAGVRSVAAGGWHSAAVTAGGVCYVWG 242
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S IP R+ G K V CG ++A +G++ WG
Sbjct: 102 VFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 160
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 161 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 211
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 35/203 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 18 PRRLESLNGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 73
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V + A G H + +T GEV+ WG + ++G ST
Sbjct: 74 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 120
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCL 205
Q +P + + + S A + +G+ L +PC
Sbjct: 121 Q-LIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 179
Query: 206 VTLNPGVKITKVAAGGRHTLILS 228
+ G+++ +VA G HTL+L+
Sbjct: 180 IAALQGIRVQRVACGYAHTLVLT 202
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 45.4 bits (106), Expect = 0.020, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALATDGQFFTWG-KNSHGQLGLGKEFPSQTSPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 40.0 bits (92), Expect = 0.97, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
TSP++ L IP + GG FAL S SG + WG ++ GQ L+ K
Sbjct: 179 TSPQRVRSLEGIPLA-------QVAAGGAHSFAL--SLSGAVFGWG-MNNAGQLGLSDEK 228
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 90/229 (39%), Gaps = 51/229 (22%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGG-CGFALATSESGKLITWGS 77
WGY P L I A + CG S + V CGG C F L E G++ T G
Sbjct: 4 WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLL---EDGEVYTCG- 59
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 60 LNTKGQ--LGHEREGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWG-------- 109
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
GS G +T A+P ++ ++ + + S A+ +
Sbjct: 110 -----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALATDGQ 157
Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FFT SP V G+ + +VAAGG H+ LS
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYL 86
P + P K L + A + S ++ G G+ +LA +++GK+ +WGS G+ +
Sbjct: 167 PVSEPSKQKSLDKLQAII---QSLNNIVGIAAGYYHSLALNDTGKIFSWGSGS-WGKLGI 222
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
S + E+P + VV A G H ++T G+V+TWG
Sbjct: 223 GSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWG 265
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVK 108
+ + CG A A S+ G LITWG+ + GQ L +G + P LP + +VK
Sbjct: 1853 RQIVSASCGAAHTAAVSQYGDLITWGNGRN-GQLGLKAGLSKDIENPVQLPAICNDPMVK 1911
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECV 134
G + V+E GE+Y G+ +
Sbjct: 1912 VVCGQEVTIVVSEKGELYMAGYESTI 1937
>gi|332238752|ref|XP_003268565.1| PREDICTED: RCC1 domain-containing protein 1 [Nomascus leucogenys]
Length = 376
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGRVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ ++T A + + P + F P L+ L G K + G RHT +++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPLGSDAVKASCGSRHTAVVT 316
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 288 QPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGW 326
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S IP R+ K CG ++A E+G++ WG
Sbjct: 149 VYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWG 258
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 32/197 (16%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
LCG G G +AT+E G++ TWG S L +G + P + T
Sbjct: 71 LCGKKITCLSYGSGPHVVVATAE-GEVYTWGH---NAYSQLGNGTTNNSLLPCQISTNLV 126
Query: 105 --SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V + A G H + +T GEVYTWG + ++G ST Q A+P
Sbjct: 127 NKKVTEVACGSHHSMILTSDGEVYTWG-------------YNNSGQVGSGSTANQ-AIPR 172
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPG 211
+ + + S A E+ +G+ L +PC + G
Sbjct: 173 RVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQG 232
Query: 212 VKITKVAAGGRHTLILS 228
+++ +VA G HTL+L+
Sbjct: 233 IRVQRVACGYAHTLVLT 249
>gi|299116189|emb|CBN74538.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 531
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 4 NGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA 63
NG + EE ++ V + LPG S + + A CGG +
Sbjct: 117 NGDCGQLGFGTEEMRDMDVKVPRLLPGLSKHR------VTAVTCGGIA-----------T 159
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-----ASVVKAAAGWAHCVS 118
A +ESG++ TWGS+DD G L+ + PE FP + A+++ A+G ++
Sbjct: 160 AALTESGRVFTWGSSDDGGIGRLSG---PDAPEQFPGEVKEGLEGATIIGLASGDCQTIA 216
Query: 119 VTEAGEVYTWG 129
+ +G+VY WG
Sbjct: 217 LDLSGKVYGWG 227
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 3/166 (1%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA S+ G+L +WG+ D +T+ P + ++++ + G HC+++
Sbjct: 96 SLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD 155
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G+ +TWG + + ++F S S Q+ + +P Q + +
Sbjct: 156 GQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALSLSGAVF 212
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ DE SPC V L K+ ++ G HT +L+
Sbjct: 213 GWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 55/231 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG ++ E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGN--HSVFLLEDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
S G+ + TE + P ++ ++ + + S A+
Sbjct: 110 ------------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
+FFT SP V G+ + +VAAGG H+ LS
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 45.4 bits (106), Expect = 0.021, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG R + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-RNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVVAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 43.5 bits (101), Expect = 0.083, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P SP L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWG 109
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
SP++ L IP + V GG FAL S SG + WG ++ GQ L+ K
Sbjct: 180 SPQRVRSLEGIPLA-------QVVAGGAHSFAL--SLSGAVFGWG-MNNAGQLGLSDEKD 229
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEAS 105
G +S DV G LA S+ GKL WGS + GQ + T+ K P+ L +A
Sbjct: 152 GTESIADVAAG-FWHTLAASKKGKLYAWGS-NKHGQLGHHDTAVKLAVEPQEILLLRDAP 209
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGW 130
+ + A G H +++T+ GEVYTWG+
Sbjct: 210 IKQVACGSYHSMALTKDGEVYTWGF 234
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 45.4 bits (106), Expect = 0.021, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 41.2 bits (95), Expect = 0.45, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYL----PGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 40.0 bits (92), Expect = 0.91, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
TSP++ L IP + GG FAL S SG + WG ++ GQ L+ K
Sbjct: 179 TSPQRVRSLEGIPLA-------QVAAGGAHSFAL--SLSGAVFGWG-MNNAGQLGLSDEK 228
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|403353167|gb|EJY76123.1| Protein kinase putative [Oxytricha trifallax]
Length = 985
Score = 45.4 bits (106), Expect = 0.022, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F++A S G + +WG A+++GQ L G T EP P+ V K G HCV++T
Sbjct: 449 FSIALSTKGIIYSWG-ANEKGQ--LGLGHEASTFEPQPVMLSKQVSKIDCGLKHCVALTA 505
Query: 122 AGEVYTWG 129
++Y WG
Sbjct: 506 DKQLYVWG 513
>gi|260826876|ref|XP_002608391.1| hypothetical protein BRAFLDRAFT_95399 [Branchiostoma floridae]
gi|229293742|gb|EEN64401.1| hypothetical protein BRAFLDRAFT_95399 [Branchiostoma floridae]
Length = 448
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASVVKAAAG 112
D G F LA +E G+L +WGS + GQ + K H P P +V AAG
Sbjct: 107 DTVACGWDFTLAVTEDGQLFSWGS-NAFGQLGVPEVKGHTSVPTPVQTLQGVRIVGVAAG 165
Query: 113 WAHCVSVTEAGEVYTWG 129
H V++ + G V+TWG
Sbjct: 166 LRHAVALDDTGSVWTWG 182
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 59 GCGFALATSESGKLITWGSAD-------DEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
G A+A ++G + TWG+ +EG+ S + G+ L E+S+V A
Sbjct: 165 GLRHAVALDDTGSVWTWGAGKRGQLGRLEEGRCPTVSKQTGKVQ----LDVESSIVAVKA 220
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
G H +++TE V+TWG D+G G F G ++ +P + P++
Sbjct: 221 GSYHSLALTEDKRVWTWG----------RADYGQLGRF-----GDRTVMPHSCSQPAE 263
>gi|330925699|ref|XP_003301155.1| hypothetical protein PTT_12590 [Pyrenophora teres f. teres 0-1]
gi|311324334|gb|EFQ90745.1| hypothetical protein PTT_12590 [Pyrenophora teres f. teres 0-1]
Length = 649
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD------ 79
GY + + +L P G S + G +A ++ G+++ WG D
Sbjct: 484 GYTDNAGADDASVLQPKIIHSLEGKSVTTLAAG-SHHNIAITKGGEVLVWGRCDGSQTGL 542
Query: 80 ---------DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
DE + +GK +P PLP ++V A G H + + EAG+ Y+WG+
Sbjct: 543 PPSQLEAETDEDKVLKNNGKPKILVQPTPLPGLKNIVTGACGPDHTIVIDEAGKAYSWGF 602
Query: 131 RECVPSAKVTRD 142
+ + T D
Sbjct: 603 SANYQTGQGTDD 614
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 40 SPIPARLCGGDS-WKDVCGG-GCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPE 96
+P+P+ D+ + D+ G C FAL T G + WG+ +EG G H P
Sbjct: 325 TPVPSEFFPEDTIFVDIAAGDSCSFALTTE--GAVYGWGTFRKNEGILGFERGNH-TAPR 381
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P L + V++ G H ++ + VY WG
Sbjct: 382 PVYLDSVKKVIQLVCGTNHVYALDKDHHVYAWG 414
>gi|348531990|ref|XP_003453490.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Oreochromis niloticus]
Length = 451
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA S+ G+L WG+++ + +T +P PL VV+AA G + +
Sbjct: 282 SLAVSKDGQLYGWGNSEYRQLALVTQATQMNSPRHLPLKGCGKVVQAACGGTQVAILNDK 341
Query: 123 GEVYTWGW 130
GEV+ WG+
Sbjct: 342 GEVFVWGY 349
>gi|260795414|ref|XP_002592700.1| hypothetical protein BRAFLDRAFT_118398 [Branchiostoma floridae]
gi|229277923|gb|EEN48711.1| hypothetical protein BRAFLDRAFT_118398 [Branchiostoma floridae]
Length = 392
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 57 GGGCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G G +A + G++ WG+ D+ GQ LTS + P P +P A V+K ++G +H
Sbjct: 143 GAGDSHTIALTTDGRVWCWGTFRDNNGQFGLTSDGKVQ-PRPVEIPLPARVLKISSGVSH 201
Query: 116 CVSVTEAGEVYTWG 129
+TE G++YT+G
Sbjct: 202 VACLTEDGDLYTFG 215
>gi|63054858|ref|NP_291022.2| RCC1 domain-containing protein 1 [Homo sapiens]
gi|63054860|ref|NP_001017919.1| RCC1 domain-containing protein 1 [Homo sapiens]
gi|190360155|sp|A6NED2.1|RCCD1_HUMAN RecName: Full=RCC1 domain-containing protein 1
gi|119622535|gb|EAX02130.1| RCC1 domain containing 1, isoform CRA_a [Homo sapiens]
gi|119622537|gb|EAX02132.1| RCC1 domain containing 1, isoform CRA_a [Homo sapiens]
gi|187954499|gb|AAI40709.1| RCC1 domain containing 1 [Homo sapiens]
gi|187954599|gb|AAI40710.1| RCC1 domain containing 1 [Homo sapiens]
Length = 376
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ ++T A + + P + F P L+ L G K + G RHT +++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVT 316
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 288 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGW 326
>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
CCMP526]
Length = 1021
Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 70/178 (39%), Gaps = 20/178 (11%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTS-GKHGETPEPFPLPTEA----SVVKAAA 111
G F L ++ GK+ TWG + + E PL EA VV AA
Sbjct: 857 AAGHAFNLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAA 916
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G +H +VTE GE+Y WG + + +V R +Q G +A+ TE A
Sbjct: 917 GHSHSAAVTEEGELYMWGMKIHL-EPQVFRVGEGDKVWQVGCGGSHTAVVTEDA------ 969
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN-PGVKITKVAAGGRHTLILS 228
+ + + S G +T P LV G + KVA G RH +++
Sbjct: 970 -------HQLFTFGKGSSLCLGHGTRSYTPHPKLVADGLAGRGVVKVACGHRHMAVIT 1020
Score = 43.1 bits (100), Expect = 0.097, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEA----SVVKAAA 111
G ++ +E GKL TWG + HG++ P P EA +VK A
Sbjct: 693 AAGLNYSAGVTEDGKLYTWGDGSNHKLG------HGDSKPVYRPRQVEALQDVKIVKVAC 746
Query: 112 GWAHCVSVTEAGEVYTWGW 130
G H ++ E G ++TWGW
Sbjct: 747 GDFHTAAIDEDGRLWTWGW 765
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 19/176 (10%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAAGWAH 115
CG L ++ G+++T G+ + S HG PEP L E + +V+ AAG A
Sbjct: 804 ACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHG-VPEPVELFDEKTNIVEVAAGHAF 862
Query: 116 CVSVTEAGEVYTWGWRE---CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ +T+ G+++TWG E ++ D S A+P K+
Sbjct: 863 NLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYS-----------MEAVPLLVEALESKKV 911
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+++ EE E G + L P + + G K+ +V GG HT +++
Sbjct: 912 VHVAAGHSHSAAVTEEGELYMWGMKIH-LEPQVFRVGEGDKVWQVGCGGSHTAVVT 966
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
+Y WGY G S P P R+ K V G CG ++A +G++ WG
Sbjct: 155 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGY- 213
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + TP V++ A G+AH +++T+ G +Y WG
Sbjct: 214 NGNGQLGLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWG--------- 264
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
A ++ + TG +S + +P E VV+ SA + SG +
Sbjct: 265 -------ANTYGQLGTGNKS---NQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVY 314
Query: 199 F 199
Sbjct: 315 M 315
>gi|426380328|ref|XP_004056825.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Gorilla
gorilla gorilla]
gi|426380330|ref|XP_004056826.1| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Gorilla
gorilla gorilla]
Length = 376
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ ++T A + + P + F P L+ L G K + G RHT +++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVT 316
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 288 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGW 326
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 40.8 bits (94), Expect = 0.54, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYL----PGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 40.0 bits (92), Expect = 0.97, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
TSP++ L IP + GG FAL S SG + WG ++ GQ L+ K
Sbjct: 179 TSPQRVRSLEGIPLA-------QVAAGGAHSFAL--SLSGAVFGWG-MNNAGQLGLSDEK 228
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 40.8 bits (94), Expect = 0.54, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYL----PGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 40.0 bits (92), Expect = 0.97, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
TSP++ L IP + GG FAL S SG + WG ++ GQ L+ K
Sbjct: 179 TSPQRVRSLEGIPLA-------QVAAGGAHSFAL--SLSGAVFGWG-MNNAGQLGLSDEK 228
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 40.8 bits (94), Expect = 0.54, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYL----PGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 40.0 bits (92), Expect = 0.96, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
TSP++ L IP + GG FAL S SG + WG ++ GQ L+ K
Sbjct: 179 TSPQRVRSLEGIPLA-------QVAAGGAHSFAL--SLSGAVFGWG-MNNAGQLGLSDEK 228
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
Length = 557
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 31/186 (16%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVT 120
L +E G+L WG G S L +G + P + V + A G H +++T
Sbjct: 103 LLATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALT 159
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
++GEVY WG+ C G GS ST Q P + R +V +
Sbjct: 160 DSGEVYAWGYNNC----------GQVGS---GSTANQPT-PRRVSSCLQNRVAVSIVCGQ 205
Query: 181 KTSSAREE-----------SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSG 229
+S A + + G+ L+PC + G+ + ++ +G H+L L+
Sbjct: 206 TSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTD 265
Query: 230 KSLESA 235
+ L A
Sbjct: 266 EGLLYA 271
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P R+ + CG +LA ++G++ WG
Sbjct: 164 VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWG-Y 222
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V + +G+AH +++T+ G +Y WG
Sbjct: 223 NGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWG 273
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 40.8 bits (94), Expect = 0.55, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYL----PGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 40.0 bits (92), Expect = 0.97, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
TSP++ L IP + GG FAL S SG + WG ++ GQ L+ K
Sbjct: 179 TSPQRVRSLEGIPLA-------QVAAGGAHSFAL--SLSGAVFGWG-MNNAGQLGLSDEK 228
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYL----PGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 40.0 bits (92), Expect = 0.95, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
TSP++ L IP + GG FAL S SG + WG ++ GQ L+ K
Sbjct: 179 TSPQRVRSLEGIPLA-------QVAAGGAHSFAL--SLSGAVFGWG-MNNAGQLGLSDEK 228
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|410300174|gb|JAA28687.1| RCC1 domain containing 1 [Pan troglodytes]
Length = 378
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 168 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 224
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 225 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 268
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ ++T A + + P + F P L+ L G K + G RHT +++
Sbjct: 269 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVT 318
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 290 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGW 328
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4247 GSQFSVALTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4305
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 4306 CSDKGEVFTWG 4316
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F+LA ++ G++ TWG D Y G + P E ++ A G
Sbjct: 3265 GAQFSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGAL 3319
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3320 HCLAVTDTGQVYAWG 3334
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G L + SG + +WG D Y G+ G +TP+ + +VVK
Sbjct: 679 CGSGDSQTLCVTASGIVFSWGDGD-----YGKLGRGGTDGSKTPKIVDKLLDINVVKVFC 733
Query: 112 GWAHCVSVTEAGEVYTWG 129
G ++T GEVYTWG
Sbjct: 734 GSQFSAALTAHGEVYTWG 751
>gi|79295482|ref|NP_001030623.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|332640300|gb|AEE73821.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 310
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S +P R+ G ++ + + G LA E G+L+ W
Sbjct: 167 REGHVWTWGQPWPPGDIKQIS-----VPVRVQGLENVRLIAVGAF-HNLALEEDGRLLAW 220
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ ++ GQ L +G T P P+ + ++V AAG H ++T+ GEVY WG
Sbjct: 221 GN-NEYGQ--LGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWG 273
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4185 GSQFSVALTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4243
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 4244 CSDKGEVFTWG 4254
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F+LA ++ G++ TWG D Y G + P E +V A G
Sbjct: 3204 GAQFSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGAL 3258
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3259 HCLAVTDTGQVYAWG 3273
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G L + SG + +WG D Y G+ G +TP+ + +VV+
Sbjct: 620 CGSGDSQTLCVTASGIVFSWGDGD-----YGKLGRGGSDGSKTPKIVDKLLDINVVRVFC 674
Query: 112 GWAHCVSVTEAGEVYTWG 129
G ++T GEVYTWG
Sbjct: 675 GGQFSAALTARGEVYTWG 692
>gi|114659014|ref|XP_523159.2| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Pan
troglodytes]
gi|332844685|ref|XP_003314905.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Pan
troglodytes]
gi|410207948|gb|JAA01193.1| RCC1 domain containing 1 [Pan troglodytes]
gi|410329461|gb|JAA33677.1| RCC1 domain containing 1 [Pan troglodytes]
Length = 380
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 170 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 226
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 227 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 270
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ ++T A + + P + F P L+ L G K + G RHT +++
Sbjct: 271 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVT 320
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 292 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGW 330
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 20 TVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLIT 74
T VY WG + S + +P P + G K + CG LA + G++ +
Sbjct: 88 TQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIA---CGDSHCLAVTMDGEVQS 144
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
WG + GQ L + + P+ SV AAG H +VTE GE+Y WGW
Sbjct: 145 WGR-NQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGW 199
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + +P P E VV + GW H +
Sbjct: 284 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTL 342
Query: 118 SVTEAGEVYTWG 129
+VTE V++WG
Sbjct: 343 AVTERQNVFSWG 354
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G+L WG G L PE +VK A GW H +SV+ +G
Sbjct: 187 AVTEDGELYGWGWGR-YGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGG 245
Query: 125 VYTWGW 130
+YT+GW
Sbjct: 246 LYTYGW 251
>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
latipes]
Length = 531
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 72/186 (38%), Gaps = 29/186 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L +E G+L WG G S L +G + P + VV+ A G H +++
Sbjct: 87 VLMATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T++GEVY WG+ C G GS ST Q + +K A V +
Sbjct: 144 TDSGEVYAWGYNNC----------GQVGS---GSTANQPTPRRVSSCLQNKVAVGIVCGQ 190
Query: 180 RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSG 229
+ + + E G+ L+PC + G+ + ++ G H L LS
Sbjct: 191 TSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSD 250
Query: 230 KSLESA 235
+ + A
Sbjct: 251 EGVLYA 256
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P R+ K G CG +LA ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWG-Y 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V++ G+AHC+++++ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAWG 258
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S IP R+ G ++ + + G LA E G L W
Sbjct: 167 REGYVWTWGQPWPPGDIKQIS-----IPVRVQGLENVRLIAVGAF-HNLALKEDGTLWAW 220
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ + Y G P FP+P + ++V AAG H ++T GEVY WG
Sbjct: 221 GNNE-----YGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG 273
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 33/75 (44%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA + GKL TWG + K TP +V+AA G HC+
Sbjct: 45 GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCL 104
Query: 118 SVTEAGEVYTWGWRE 132
+V + G Y WG E
Sbjct: 105 AVDDQGRAYAWGGNE 119
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4196 GSQFSVALTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4254
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 4255 CSDKGEVFTWG 4265
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F+LA ++ G++ TWG D Y G + P E +V A G
Sbjct: 3214 GAQFSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGAL 3268
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3269 HCLAVTDTGQVYAWG 3283
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G L + SG + +WG D Y G+ G +TP+ + +VVK
Sbjct: 620 CGSGDSQTLCVTASGIVFSWGDGD-----YGKLGRGGTDGSKTPKIVDKLLDINVVKVFC 674
Query: 112 GWAHCVSVTEAGEVYTWG 129
G ++T GEVYTWG
Sbjct: 675 GSQFSAALTAHGEVYTWG 692
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 18 KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
+E+ VY+WG L G S K P+ S + ++L K + GG S+
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKG-SKIKLPVYSEVLSKL------KPIHIAGGSKTLFIVSQ 3011
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
GKL G + G+ L + P+P P ++ + K A +G H +++T+ G+V+
Sbjct: 3012 EGKLYACGEGTN-GRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVF 3070
Query: 127 TWG 129
+WG
Sbjct: 3071 SWG 3073
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHC 116
G ALA ++ GK+ +WG +D L G + +P + T S + A G H
Sbjct: 3056 GGKHALALTQDGKVFSWGEGED---GKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHS 3112
Query: 117 VSVTEAGEVYTWGWRE 132
++ GE+YTWG E
Sbjct: 3113 AAIASNGELYTWGLGE 3128
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 45.1 bits (105), Expect = 0.027, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVC-GGGCGFALATSESGK 71
KM C G+ T P K P +S RL +++ C G +LA + G+
Sbjct: 56 KMYACGNNDHGQLGHDLDTLPNKRPRMSRF-KRLTSLENYIITCISCGTAHSLALTNWGQ 114
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
+ +WGS + GQ ++G P P + + VV+ A+G HC+++T GE+Y WG
Sbjct: 115 VFSWGS-NAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWG 172
>gi|403173682|ref|XP_003332733.2| hypothetical protein PGTG_14398 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170648|gb|EFP88314.2| hypothetical protein PGTG_14398 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 694
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 32 SPEKSPILSPIP---ARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
SP+ P + P AR+C GDS ++A SE G+L+ WGS
Sbjct: 277 SPQPDPESNRTPFKAARVCAGDS----------VSVAVSEEGELVAWGSFRSNDGLLGFD 326
Query: 89 GKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
G G +P+ +PT S V + G+ H +++T G VY+WG
Sbjct: 327 GMVGTSPKQL-VPTRVSNLREYPVSQVVCGYDHVLALTTDGHVYSWG 372
>gi|189235771|ref|XP_970173.2| PREDICTED: similar to regulator of chromosome condensation
[Tribolium castaneum]
Length = 422
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
PA + D D+C GG T E GK++++G D+ +T GK P +
Sbjct: 62 PALVQTSDEIVDICAGGMHTVCLTKE-GKILSFGCNDEGALGRITEGKEDAESTPGEVEL 120
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWG 129
V++ AG +H ++ + G V+ WG
Sbjct: 121 PGKVIQITAGDSHSAALLDDGRVFAWG 147
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 65 ATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A + G++ WG+ D G LT G P+ + E V+K A+G H V +T G
Sbjct: 136 ALLDDGRVFAWGTFRDSHGNMGLT--LRGNEKLPYEIIQEVHVIKIASGADHIVFLTNHG 193
Query: 124 EVYTWG 129
EVYT G
Sbjct: 194 EVYTCG 199
>gi|410908657|ref|XP_003967807.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Takifugu rubripes]
Length = 388
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 31/128 (24%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCG---------GDSWKDVCGGGCGFALATSESGKL 72
VY WG + +++ SP+P+ L V G + +E+G L
Sbjct: 154 VYQWGIGLMSQAKRTLSPSPVPSHLSSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDL 213
Query: 73 ITWGSADDEGQSYLTSGKHGE--TPEPF---PLPTEAS------VVKAAAGWAHCVSVTE 121
WGS KH + + EPF P P E S V++ +GW H V+ TE
Sbjct: 214 FLWGS-----------NKHSQLLSSEPFLSSPTPVERSLLGGETVLRVWSGWTHIVAQTE 262
Query: 122 AGEVYTWG 129
G V+TWG
Sbjct: 263 TGRVFTWG 270
>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
[Ornithorhynchus anatinus]
Length = 531
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 86/228 (37%), Gaps = 48/228 (21%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I+ P L G K + G L ++E G + WG G S L +G
Sbjct: 55 GTGDNQSTIV-PKKLELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
+ P + T V + A G H +++ + GEVY WG+ C G
Sbjct: 111 TTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNC----------GQV 160
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD--EFF----- 199
GS ST Q P+ ++ + +R S A ++ + A D E +
Sbjct: 161 GS---GSTANQ---------PTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYN 208
Query: 200 ------------TLSPCLVTLNPGVKITKVAAGGRHTLILSGKSLESA 235
L+PC V V + ++ G HTL L+ + L A
Sbjct: 209 GNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYA 256
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P ++ K V CG ++A ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V++ G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWG 258
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 45.1 bits (105), Expect = 0.028, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 58 GGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWA 114
CG LA +E G+L +WGS + EGQ L S E+ P + VV+ A G
Sbjct: 116 AACGAYHTLAINEWGQLFSWGS-NTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMK 174
Query: 115 HCVSVTEAGEVYTWG 129
H ++T GE+Y+WG
Sbjct: 175 HAFALTNNGELYSWG 189
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 45.1 bits (105), Expect = 0.028, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 58 GGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWA 114
CG LA +E G+L +WGS + EGQ L S E+ P + VV+ A G
Sbjct: 116 AACGAYHTLAINEWGQLFSWGS-NTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMK 174
Query: 115 HCVSVTEAGEVYTWG 129
H ++T GE+Y+WG
Sbjct: 175 HAFALTNNGELYSWG 189
>gi|297792001|ref|XP_002863885.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297309720|gb|EFH40144.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 454
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 16/164 (9%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A + G L WG + GQ L G P VVK + GW H +++T G
Sbjct: 152 AIGDDGSLWVWGRSK-RGQLGLGKGIIEARVPSRVETLAAEHVVKVSLGWGHALALTVDG 210
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
+V+ WG+ V +V + DS S A + + A ++VV+
Sbjct: 211 KVFGWGY---VADGRVGNVGLPLEASLLDSITDGSMKDQHAADLNLEAAEKKVVE----- 262
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ +E++ P PCLV VK+ +A G H+LIL
Sbjct: 263 AMSKENDMP------IAWEPCLVEETRNVKVADIACGSDHSLIL 300
>gi|242020879|ref|XP_002430878.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Pediculus humanus corporis]
gi|212516089|gb|EEB18140.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Pediculus humanus corporis]
Length = 409
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 74/189 (39%), Gaps = 38/189 (20%)
Query: 60 CGFALATSESGKLITWGSAD-----DEGQSY--LTSGKHGETPEPFPLPTEASVVKAAAG 112
C LA ++ G + WG+++ D SY + + H + E F +V AA
Sbjct: 234 CDCVLAINDKGDVFGWGNSEYGQLCDRTDSYTQINTPLHMKKCEGF-----GKIVDVAAA 288
Query: 113 WAHCVSVTEAGEVYTWGWR--------------ECVPSAKVTRDFGSAGSFQKDSTGKQS 158
+ C+ + E GEV+TWG+ E +PS R+ FQKDS
Sbjct: 289 GSFCMMLNEIGEVFTWGFGILGRGPNASQSFQPEVIPSILFGRN-----DFQKDSRVVSV 343
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
+ + + + + N A D+FF L CL PG K K+A
Sbjct: 344 HCGVHYCGAINNYGEIYMWGKNQENCLGLMINNNA--DQFFPLRVCL----PG-KGKKLA 396
Query: 219 AGGRHTLIL 227
G H+L L
Sbjct: 397 LGVDHSLAL 405
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 180 GSQFSVALTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 238
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 239 CSDKGEVFTWG 249
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F + SE GK+ T+G Y++ TP+ + +VK +AG++ C +
Sbjct: 215 GIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQL--IKDLNDIVKISAGYSFCAA 272
Query: 119 VTEAGEVYTWG 129
+T+ G++YTWG
Sbjct: 273 ITKQGKLYTWG 283
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 18 KETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLIT 74
K+ +Y WG G + P+ + G S + CG F A ++ G+L T
Sbjct: 275 KQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYT 334
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WG D GQ L G + P + + ++K A G +H +TE ++Y +G
Sbjct: 335 WGFGGD-GQ--LGHGNKSDLYAPRHVEFKQKIIKIACGGSHAAFITEDNQLYQFG 386
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 15 EECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
E ET+VY WGY G E + +P + K V G ++A + +G
Sbjct: 44 NEYPETIVYSWGYGGFGQLGLQNENN-YYTPTEIEVLTDKKIKKVEAGKS-ISMALTHNG 101
Query: 71 KLITWGSA-------DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
++ +WG +D +T PE + + + G H +VTE G
Sbjct: 102 EVYSWGKNKGGILGHEDRLSFNMTQ------PERIEKLLGKKIKQISCGQFHMAAVTEDG 155
Query: 124 EVYTWGWRE 132
EVYTWG +E
Sbjct: 156 EVYTWGNKE 164
>gi|171681784|ref|XP_001905835.1| hypothetical protein [Podospora anserina S mat+]
gi|170940851|emb|CAP66501.1| unnamed protein product [Podospora anserina S mat+]
Length = 592
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE--GQ---SYL---TSG 89
++ P G D+ GG +LA + GKL+TWG D GQ S+ T
Sbjct: 438 VMRPQIVESLSGYEIADIAGGEH-HSLACTTDGKLLTWGRIDGHQVGQPTGSFTEDNTIY 496
Query: 90 KHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
+ P +PTE VV+ AAG H +VT+ G+VY+WG+ + + T D
Sbjct: 497 DDRQKPRILVVPTEIPEVKDVVQVAAGTDHSFAVTKDGKVYSWGFSANYQTGQGTTD 553
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP-----LPTEASVVKAAAGW 113
G LA E K+ WG A + Q + +T +P LP A VK A G
Sbjct: 344 GLNHILALDEKNKIYAWG-AGQQAQLARRLLERDDTAALYPAGVGSLPGRAKAVKLACGS 402
Query: 114 AHCVSVTEAGEVYTWG---WREC 133
HC + G V +WG + EC
Sbjct: 403 YHCFVIDTKGRVISWGLNNYAEC 425
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P E VV+ A GW H +
Sbjct: 292 GGWRHTMALAADGKLYGWG-WNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTL 350
Query: 118 SVTEAGEVYTWG 129
++TEA V++WG
Sbjct: 351 ALTEAKNVFSWG 362
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 74/189 (39%), Gaps = 36/189 (19%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKA 109
+CG A + E +L +WG D HG + + F P P +A + +
Sbjct: 82 ICGADHTTAYSDEEL-QLYSWGWGD------FGRLGHGNSSDVFNPQPIQALQGVRITQI 134
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G +HC++VT AG V++WG + G +T + S LP +
Sbjct: 135 ACGDSHCLAVTVAGHVHSWGRNQ-------------NGQLGLGNT-EDSLLPQKIQAFEG 180
Query: 170 KRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAA 219
R T++ E+ + N GD L P V+ G K+ VA
Sbjct: 181 VRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVAC 240
Query: 220 GGRHTLILS 228
G RHT+ +S
Sbjct: 241 GWRHTITVS 249
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Query: 18 KETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
+E +Y WG + S + +P P + G + CG LA + +G +
Sbjct: 94 EELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA---CGDSHCLAVTVAGHV 150
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 151 HSWGR-NQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGW 207
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 61/174 (35%), Gaps = 25/174 (14%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE +V A GW H ++V+ +G
Sbjct: 195 AVTEDGDLYGWGWGR-YGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGS 253
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D + R T +
Sbjct: 254 IYTYGWSK----------YGQLGH----GDFEDHLVPHKLEALKDTTISQISGGWRHTMA 299
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + GD SP V K+ +VA G RHTL L+
Sbjct: 300 LAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALT 353
>gi|119622536|gb|EAX02131.1| RCC1 domain containing 1, isoform CRA_b [Homo sapiens]
Length = 390
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 180 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 236
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 237 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 280
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ ++T A + + P + F P L+ L G K + G RHT +++
Sbjct: 281 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVT 330
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 302 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGW 340
>gi|329927260|ref|ZP_08281541.1| hypothetical protein HMPREF9412_2305 [Paenibacillus sp. HGF5]
gi|328938563|gb|EGG34947.1| hypothetical protein HMPREF9412_2305 [Paenibacillus sp. HGF5]
Length = 1058
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEAS----VVKAAAG 112
G + LA E G L++WG + GQ S G + P+P VV +AG
Sbjct: 250 GNDYTLALKEDGTLLSWG-VNGYGQLGSDTLQGTYSNYPKPVLDKASGDAFGHVVDISAG 308
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
AH ++ E G V+TWG SA +T G ++ G+ + LP
Sbjct: 309 IAHVAAIREDGSVWTWGGNTIWGSADITGQLGRGDDRLEERPGRVTRLP 357
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 45.1 bits (105), Expect = 0.030, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAH 115
CG +A +E G+L +WGS + EGQ L S E +P + +V+ A G H
Sbjct: 122 ACGAYHTIAVNEWGQLFSWGS-NSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKH 180
Query: 116 CVSVTEAGEVYTWG 129
+++T GE+Y+WG
Sbjct: 181 ALALTNNGELYSWG 194
>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
domestica]
Length = 531
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 94/251 (37%), Gaps = 52/251 (20%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + V+++G GT +S I+ LCG K + G L +
Sbjct: 32 NEAIYVTHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCG-KKIKSLSYGSGPHVLLS 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G + WG G S L +G + P + T V++ A G H +++ G
Sbjct: 91 TEDGMVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EVY WG+ C G GS ST Q P+ ++ + +R S
Sbjct: 148 EVYAWGYNNC----------GQVGS---GSTANQ---------PTPRKVTNCLHIKRVVS 185
Query: 184 SAREESENPASGD--EFF-----------------TLSPCLVTLNPGVKITKVAAGGRHT 224
A ++ + A D E + L+PC V V + ++ G HT
Sbjct: 186 IACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHT 245
Query: 225 LILSGKSLESA 235
L L+ + L A
Sbjct: 246 LALTDEGLLYA 256
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P ++ K V CG ++A ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V++ G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWG 258
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A S +G + TWG D + +H P+ V+ + G HCV
Sbjct: 3869 GSQFSVALSNNGSVYTWGKGDYHRLGH-GVDEHVRRPKKVMTLQGKKVISISTGALHCVV 3927
Query: 119 VTEAGEVYTWG 129
T+ GEVYTWG
Sbjct: 3928 CTDQGEVYTWG 3938
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVK 108
VC CG F++A + +G + TWG D Y G + +P E V+
Sbjct: 2945 VCHVECGAQFSVALTCNGHVYTWGKGD-----YFRLGHGSDQHVRWPTLVEGLRGKKVIG 2999
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
+ G HC++VT+AG+V+ WG
Sbjct: 3000 VSVGALHCLAVTDAGQVFAWG 3020
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 63 ALATSESGKLITWGSADD--EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
ALA + G++ +WG DD G +TS +TP V AAG H +VT
Sbjct: 2797 ALALTADGRVFSWGEGDDGKLGHGDVTSL---DTPRCIEALNGFRVRDVAAGSNHSAAVT 2853
Query: 121 EAGEVYTWGWRE 132
+GE+YTWG E
Sbjct: 2854 SSGELYTWGLGE 2865
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 78/197 (39%), Gaps = 18/197 (9%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPE 96
+SP+ + G S + VC GG A+ T + G++ TWG G L G E+P
Sbjct: 260 VSPVVVQGLLGLSVQQVCCGGQHAAVLT-DCGEIFTWGRG---GFGRLGHGNREGLESPR 315
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
V+ A G+A+ +VT +GE+YTWG A G + + +
Sbjct: 316 RIEALEGIPCVQVACGFAYTAAVTASGELYTWG-------AGENGRLGLGDVADRHTPSR 368
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG----- 211
L ++ V+ R T A + E GD L P L+ G
Sbjct: 369 VEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGAL 428
Query: 212 VKITKVAAGGRHTLILS 228
V+ V GG HT+ L+
Sbjct: 429 VRQISVGPGGYHTMALT 445
>gi|408389507|gb|EKJ68954.1| hypothetical protein FPSE_10879 [Fusarium pseudograminearum CS3096]
Length = 593
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 18 KETVVYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSES 69
KE VVY WG + + E ++ PA+L D + GG +LA S+
Sbjct: 398 KEGVVYGWGLNNFGEIGVESNAGEDDAVILR-PAKLTYLDDYNITEIDGGEHHSLACSDK 456
Query: 70 GKLITWGSAD------------DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G L+TWG D +E Y G +P P +V AAG +
Sbjct: 457 GDLLTWGRVDGYQVGFEFDKLSEENSIYDERGNARILFKPTIQPDVKDIVSVAAGTDNNF 516
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRD 142
+++ G VY+WG+ + + T D
Sbjct: 517 AISSNGTVYSWGFSSNYQTGQGTID 541
>gi|22202769|dbj|BAC07425.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|125557351|gb|EAZ02887.1| hypothetical protein OsI_25020 [Oryza sativa Indica Group]
gi|125599227|gb|EAZ38803.1| hypothetical protein OsJ_23206 [Oryza sativa Japonica Group]
Length = 1073
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 22 VYMWGYLPG--------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
+Y WG+ G S + + +++P + G +V + +E+G+L
Sbjct: 206 LYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIATEAGELF 265
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TWGS + EGQ S TP +A ++ AA H +V + GEV+TWG
Sbjct: 266 TWGS-NREGQLGYPSVDTQPTPRRVS-SLKARIISVAAANKHSAAVADTGEVFTWG 319
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S +P R+ G ++ + + G LA E G+L+ W
Sbjct: 167 REGHVWTWGQPWPPGDIKQIS-----VPVRVQGLENVRLIAVGAF-HNLALEEDGRLLAW 220
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ ++ GQ L +G T P P+ + ++V AAG H ++T+ GEVY WG
Sbjct: 221 GN-NEYGQ--LGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWG 273
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L G + + G G +LA + +G ++TWG + +GQ + TP
Sbjct: 199 TPVDVDLPAGTTVTAIAAG-IGHSLALTSAGTVLTWG-LNSDGQLGDGTTTDSSTPIAVD 256
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
LP +V AAG H ++VT AG + WG
Sbjct: 257 LPAGTTVTAIAAGSLHSLAVTTAGTILAWG 286
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+PI L G + + G +LA + +G + WG +D G+ + +TP
Sbjct: 147 TPIAVDLPAGTTVTAIAAGD-DHSLAVTSAGTALAWGD-NDRGELGDGTTTRRDTPVDVD 204
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
LP +V AAG H +++T AG V TWG
Sbjct: 205 LPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNS 237
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T+ +PI +PA + GG +LA + +G + WG DD GQ +
Sbjct: 298 TTNSSTPIAVNLPAS-----TTITAIDGGRDHSLAVTSAGSALAWGDNDD-GQLGDGTTT 351
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ TP LP + +V AG H ++VT AG + WG
Sbjct: 352 NSSTPIAVNLPADTTVTATTAGSLHSLAVTTAGTILAWG 390
>gi|405952428|gb|EKC20241.1| Williams-Beuren syndrome chromosomal region 16-like protein
[Crassostrea gigas]
Length = 492
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G C LA SE G L WG+++ S +T P PLP S+ KAAA + C
Sbjct: 320 GDC--VLAVSERGDLFGWGNSEYGQLSAITDQTQVSVPRNLPLP--HSISKAAAAGSKCA 375
Query: 118 SVTEAGEVYTWGW 130
+T+ +V WG+
Sbjct: 376 VLTDKNDVLVWGF 388
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 44.7 bits (104), Expect = 0.033, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAH 115
CG ++A S+ G+L +WG+ D GQ LT+ + T P + ++++ + G H
Sbjct: 90 ACGESHSVALSDQGQLFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH 148
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
C+++ G+ +TWG + + ++ S S Q+ +P Q +
Sbjct: 149 CLALAADGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPLAQVAAGGAHSFAL 205
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + S DE SPC V L K+ ++ G HT +L+
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
Score = 37.7 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
SP++ L IP + GG FAL S SG + WG + GQ L+ +
Sbjct: 180 SPQRVKSLDGIPLA-------QVAAGGAHSFAL--SLSGAVFGWGK-NSSGQLGLSDERD 229
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 230 RESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P E VV+ A GW H +
Sbjct: 297 GGWRHTMALAADGKLYGWG-WNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTL 355
Query: 118 SVTEAGEVYTWG 129
++TEA V++WG
Sbjct: 356 ALTEAKNVFSWG 367
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 74/189 (39%), Gaps = 36/189 (19%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKA 109
+CG A + E +L +WG D HG + + F P P +A + +
Sbjct: 87 ICGADHTTAYSDEEL-QLYSWGWGD------FGRLGHGNSSDVFNPQPIQALQGVRITQI 139
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G +HC++VT AG V++WG + G +T + S LP +
Sbjct: 140 ACGDSHCLAVTVAGHVHSWGRNQ-------------NGQLGLGNT-EDSLLPQKIQAFEG 185
Query: 170 KRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAA 219
R T++ E+ + N GD L P V+ G K+ VA
Sbjct: 186 VRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVAC 245
Query: 220 GGRHTLILS 228
G RHT+ +S
Sbjct: 246 GWRHTITVS 254
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Query: 18 KETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
+E +Y WG + S + +P P + G + CG LA + +G +
Sbjct: 99 EELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA---CGDSHCLAVTVAGHV 155
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 156 HSWGR-NQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGW 212
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 24/173 (13%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
+++G+L T+G +D GQ L +H TP+ V A G H + T AGE
Sbjct: 483 VITDAGELYTFG-MNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGE 541
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG------EEVVK 178
++T G D+G G + +Q LPT A P++ + VV
Sbjct: 542 LFTCG----------KNDYGQLGL----AHNRQIKLPTLVALPNEMVSFVACGYYHSVVV 587
Query: 179 R---RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
R S R + G + P +V L+ ++ + G HT++LS
Sbjct: 588 STGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLS 640
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG+ ++ S G+ ++G +D GQ + S H P L + +V+A G H
Sbjct: 578 ACGYYHSVVVSTGGRAFSFGR-NDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHT 636
Query: 117 VSVTEAGEVYTWG 129
V ++E G+VY +G
Sbjct: 637 VLLSEQGQVYVFG 649
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 58 GGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
GC +A +++G +WG D G L + H P+ + + A+ + H
Sbjct: 423 NGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIH--VPKLIESLKDKKLGFASVSYHH 480
Query: 116 CVSVTEAGEVYTWGWREC 133
+T+AGE+YT+G +C
Sbjct: 481 SAVITDAGELYTFGMNDC 498
>gi|307185824|gb|EFN71675.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 854
Score = 44.7 bits (104), Expect = 0.034, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K++ CG F + ++ KL WG + S+ + K+ + P +E +VK
Sbjct: 199 KNIIYIACGHKFNMVITDENKLYGWGDNYNGQISFDRAQKYYKYPREITTFSENKIVKMV 258
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G++H +++T GE+Y WG
Sbjct: 259 CGFSHTLAITNKGELYAWG 277
>gi|321468288|gb|EFX79274.1| hypothetical protein DAPPUDRAFT_104548 [Daphnia pulex]
Length = 202
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
P+R+ S G +A + GK+ +WGS GQ S + E P+ +
Sbjct: 55 PSRMENMQSVFVAIASGKEHFIALNSEGKVYSWGSGS-RGQLGHGSIESNEYPQEIEVLG 113
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+V+ AAG H +++E+G+VY WGW E
Sbjct: 114 GIKIVQIAAGGWHSCALSESGDVYVWGWNE 143
>gi|307353378|ref|YP_003894429.1| KH-domain/beta-lactamase-domain-containing protein [Methanoplanus
petrolearius DSM 11571]
gi|307156611|gb|ADN35991.1| KH-domain/beta-lactamase-domain protein [Methanoplanus petrolearius
DSM 11571]
Length = 629
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 64/172 (37%), Gaps = 25/172 (14%)
Query: 20 TVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGC-------GFALATSE 68
TV + YL E+ L I R+ D W V GC F L+T E
Sbjct: 142 TVKQIRQYLRSVKDERKEFLRTIGRRIHRDVTSKDKWVRVTTLGCCREVGRAAFLLSTPE 201
Query: 69 SGKLITWGS--ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
S LI G EG YL PE +PL T +VV A HC V +Y
Sbjct: 202 SKILIDCGEKPGSTEGVPYLY------VPEIYPLNTLDAVVLTHAHLDHCALVP---LLY 252
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+G+ V S TRD A Q D S QAP + K E + K
Sbjct: 253 RYGFEGPVYSTPATRDL--AVMLQLDYLEVVSN-EANQAPYTSKEVQEYLKK 301
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT---EASV 106
D+ K+V GG LA ++ G+ +WG +D L G + +P P+PT V
Sbjct: 294 DNVKEVAAGGA-HMLALTKDGQAWSWGWGED---GRLGHGATEDFLKPEPIPTLGPAVGV 349
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW 130
V +AG H +++TE+G+VY WG+
Sbjct: 350 VSVSAGGGHSLALTESGQVYGWGF 373
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 18 KETVVYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
K+ V+ WGY GT E L P + G+ V G L G
Sbjct: 209 KDGRVWTWGYGIDGQLGHNGTEDE----LKPKELTVIRGEGISRVTCGTDFTGLLNETEG 264
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+L T+G+ + GQ L G+ G EP +P + +V + AAG AH +++T+ G+ ++WGW
Sbjct: 265 RLFTFGNGE-AGQ--LGHGERGLCLEPSVVPLD-NVKEVAAGGAHMLALTKDGQAWSWGW 320
Query: 131 RE 132
E
Sbjct: 321 GE 322
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+A S++G++ WG+++ GQ+ L + + P + S+V + G H +V++
Sbjct: 152 GIALSKNGEVYIWGNSE-FGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKD 210
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP----SDKRAGEEVVK 178
G V+TWG+ + G G+ + + + + E +D +
Sbjct: 211 GRVWTWGY-------GIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETE 263
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
R + E+ G+ L P +V L+ + +VAAGG H L L+
Sbjct: 264 GRLFTFGNGEAGQLGHGERGLCLEPSVVPLD---NVKEVAAGGAHMLALT 310
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 44.7 bits (104), Expect = 0.036, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAH 115
CG +LA S+ G+L +WG+ D GQ LT+ + P + ++++ + G H
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSD-GQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
C+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 149 CLALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFAL 205
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 40.0 bits (92), Expect = 0.96, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EGGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLTTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 37.7 bits (86), Expect = 4.5, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T+ G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSC 271
>gi|146298949|ref|YP_001193540.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
gi|146153367|gb|ABQ04221.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
Length = 1679
Score = 44.7 bits (104), Expect = 0.036, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 52 WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK--- 108
WK G +A G L TWG+ +DEGQ TP +PT+
Sbjct: 21 WK-TAAAGYSHTVAVRNDGTLWTWGN-NDEGQL------GNSTPAAINIPTKMGTANNWK 72
Query: 109 -AAAGWAHCVSVTEAGEVYTWGW 130
AAAGW H V++ G ++ WG+
Sbjct: 73 TAAAGWGHTVALKTDGTLWAWGY 95
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVK-AAAGWA 114
G G +LA + +G++ +WG D L G H + P+ P VVK +AG+
Sbjct: 489 GSDGHSLALTTTGEVYSWGDGD---YGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYR 545
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
H +VTE GE+YTWG E ++ D+ S+ +F
Sbjct: 546 HSAAVTEDGELYTWGDGE---FGRLGHDYTSSKNF 577
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 44.7 bits (104), Expect = 0.037, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + +++ S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEYPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G E SP R G V GG + A S SG + WG ++ GQ L+
Sbjct: 170 GLGKEYPSQASPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDE 227
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+ E+P L VV + G H +T++G V+T+G C
Sbjct: 228 EDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 15/113 (13%)
Query: 20 TVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS 77
T VY WG + +P P + G K + CG LA + G++ +WG
Sbjct: 88 TQVYSWG---------CDLFTPQPIKALHGLRIKQIA---CGDSHCLAVTMDGEVQSWGR 135
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + + P+ SV AAG H +VTE GE+Y WGW
Sbjct: 136 -NQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGW 187
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + +P P E VV + GW H +
Sbjct: 272 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTL 330
Query: 118 SVTEAGEVYTWG 129
+VTE V++WG
Sbjct: 331 AVTERQNVFSWG 342
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G+L WG G L PE +VK A GW H +SV+ +G
Sbjct: 175 AVTEDGELYGWGWGR-YGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGG 233
Query: 125 VYTWGW 130
+YT+GW
Sbjct: 234 LYTYGW 239
>gi|156361074|ref|XP_001625345.1| predicted protein [Nematostella vectensis]
gi|156212175|gb|EDO33245.1| predicted protein [Nematostella vectensis]
Length = 440
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 64 LATSESGKLITWGSADDE--GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+A S+ GK+ TWG DD G+ + G+ P +P + ++V +AG +H ++++
Sbjct: 92 VALSKDGKVYTWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSD 151
Query: 122 AGEVYTWG 129
G VY WG
Sbjct: 152 QGTVYAWG 159
>gi|408500687|ref|YP_006864606.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465511|gb|AFU71040.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 497
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 81/208 (38%), Gaps = 41/208 (19%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
+K+PI P+P + G ++ V GG LA G + +WG +D GQ L G
Sbjct: 216 QKTPIKVPLPDGVAAGFTYTQVAAGGY-HVLAVGSDGIVYSWG-YNDHGQ--LGDGTKTS 271
Query: 94 TPEP---FPLPTEASVVKAA---AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
P P L + ++AA AG H ++V + G WGW + G
Sbjct: 272 RPSPRQVTSLTGSSQGLQAAWISAGVHHSLAVDQNGAACAWGWN-------------TDG 318
Query: 148 SFQKDSTGKQSALPTEQAPP-------SDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
+T Q +PT +PP S A R + + ++ A GD ++
Sbjct: 319 QLGDGNTSDQ-PMPTRVSPPVGQGKAGSGFAAAHASAGRNHSLAIGQDGNAYAWGDNTYS 377
Query: 201 L----------SPCLVTLNPGVKITKVA 218
+P LV NP + IT V+
Sbjct: 378 QLGNGGTTQSSTPALVAFNPVLLITGVS 405
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 17/104 (16%)
Query: 43 PARLCGGDSWKDVCGGGC------GFALATSESGKLITWGSADDEGQSYLTSGKHG---- 92
P ++ G + V GG GF++ + G WGS + GQ L+ G
Sbjct: 160 PPKISRGIRFNQVSAGGYQAGDFRGFSMGVASDGNAYAWGS-NQHGQ--LSQGTADSTTQ 216
Query: 93 ETPEPFPLPTEASV----VKAAAGWAHCVSVTEAGEVYTWGWRE 132
+TP PLP + + AAG H ++V G VY+WG+ +
Sbjct: 217 KTPIKVPLPDGVAAGFTYTQVAAGGYHVLAVGSDGIVYSWGYND 260
>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 570
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 75/199 (37%), Gaps = 26/199 (13%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+P L G V G +LA + +G ++ WG +D GQ + TP
Sbjct: 80 TPLPVSLPAGTDATAVVAGDF-HSLALTSAGTVLAWGR-NDSGQLGDGTTVSSSTPVVVR 137
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP +V AAG+ H +++T G V WG + FG G D T S+
Sbjct: 138 LPVGVTVTAVAAGFGHSLALTSTGVVLAWG----------SNSFGQLG----DGTTVSSS 183
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF-------FTLS---PCLVTLN 209
P P + + A G+ F T+S P V L
Sbjct: 184 TPVAVRLPVGVTVTAVAAGSGHSLALTSVGAALAWGNNFSGQLGDGTTVSSSTPVAVRLP 243
Query: 210 PGVKITKVAAGGRHTLILS 228
G +T VA G H+L L+
Sbjct: 244 VGTTVTAVAGGSHHSLALT 262
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 8 REENEKMEECKETVVY-----MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
+ NE + K+ +VY +G L GT +S I LCG S K G
Sbjct: 34 KAANETLLVTKDDMVYGIGNNTYGCL-GTGDTQSTIYPKKIEALCG-KSVKTFAYGKGPH 91
Query: 63 ALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSV 119
LA +E GK+ +WG D + G S G TP P + + VV A G H +++
Sbjct: 92 VLALTEEGKVYSWGYNDYCELGNK---STNEGLTPTLVPSVLDDKFVVDIACGGHHSLAL 148
Query: 120 TEAGEVYTWG 129
T GE+Y WG
Sbjct: 149 TNKGEIYAWG 158
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 22 VYMWGY-----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
VY WGY L S + + +P+ L CGG +LA + G++ WG
Sbjct: 101 VYSWGYNDYCELGNKSTNEGLTPTLVPSVLDDKFVVDIACGGH--HSLALTNKGEIYAWG 158
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ + G T +P P VV + G + V+VT++GEVY+WG
Sbjct: 159 H-NVSGQ--VGCGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWG 213
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 44.7 bits (104), Expect = 0.039, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 58 GGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWA 114
CG +A +E G+L +WGS + EGQ L S E +P + +V+ A G
Sbjct: 137 AACGAYHTIAVNEWGQLFSWGS-NSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMK 195
Query: 115 HCVSVTEAGEVYTWG 129
H +++T GE+Y+WG
Sbjct: 196 HALALTNNGELYSWG 210
>gi|328868228|gb|EGG16606.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1076
Score = 44.7 bits (104), Expect = 0.039, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 60 CGFALATS---ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG++ + + S +L +WG D GQ L S +P PL T +V+ G H
Sbjct: 380 CGYSHSVAVQAHSSQLYSWGKGSD-GQLGLGSRSDHSSPTAIPLFTSDPIVRICCGHYHT 438
Query: 117 VSVTEAGEVYTWG 129
V++T ++Y+WG
Sbjct: 439 VALTSQSKLYSWG 451
>gi|72390902|ref|XP_845745.1| regulator of chromosome condensation [Trypanosoma brucei TREU927]
gi|62175843|gb|AAX69970.1| regulator of chromosome condensation, putative [Trypanosoma brucei]
gi|70802281|gb|AAZ12186.1| regulator of chromosome condensation, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 840
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 15/90 (16%)
Query: 59 GCGFALATSESGKLITWGSA---------------DDEGQSYLTSGKHGETPEPFPLPTE 103
GC FALA S +G + +WG+ D+ L + P +P+
Sbjct: 578 GCFFALALSATGCVYSWGNIECCGVGDLPLPPEIPDNLVMESLGNDSTASILMPVEVPSL 637
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+++V AAG H +++ AGE+Y WG C
Sbjct: 638 SNIVAVAAGAWHAMALNAAGEIYAWGIGAC 667
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 24 MWGYLPGTSPEKSPILS----PIPARLCGGD----SWKDV---CGGGCGFALATSESGKL 72
MWG L P+ P+LS +P D +W ++ GG F A S G++
Sbjct: 95 MWGELGVPDPQVMPLLSCTEHGVPISTAQIDLRQFNWNEMIVDVKGGHAFFAALSSKGEV 154
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ WG+ D + G TP + E +V+ A G ++++E GEVY WG+
Sbjct: 155 LLWGANDYAQCTPEVRGACCATPRKRRVAAE-RIVEVACGNYTVLALSERGEVYGWGY 211
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 5/178 (2%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 163 QHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 222
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S S Q+ +P Q
Sbjct: 223 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQR--VRSLEGIPLAQVAAGGA 279
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + + DE SPC V L K+ ++ G HT +L+
Sbjct: 280 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 337
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 55/231 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 83 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 139
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 140 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 188
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
AG S G+ + TE + P ++ ++ + + S A+
Sbjct: 189 -------AG-----SDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 234
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
+FFT SP V G+ + +VAAGG H+ LS
Sbjct: 235 GQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 285
>gi|237843659|ref|XP_002371127.1| regulator of chromosome condensation, putative [Toxoplasma gondii
ME49]
gi|148357842|gb|ABQ59247.1| regulator of chromosome condensation 1 [Toxoplasma gondii]
gi|211968791|gb|EEB03987.1| regulator of chromosome condensation, putative [Toxoplasma gondii
ME49]
Length = 1155
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK-AAAG 112
+ GGG F++A G L TWG +D G + S +G EP L A V G
Sbjct: 675 NFVGGGQFFSVALRTDGCLYTWGQSDFTG--HGCSESYGVVEEPRVLEKLAGQVHWVQCG 732
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++ T+AG +YTWG
Sbjct: 733 SDHCLAATDAGRLYTWG 749
>gi|405960252|gb|EKC26193.1| RCC1 domain-containing protein 1 [Crassostrea gigas]
Length = 422
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 17/179 (9%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA----AAGW 113
CG AL + SG + + G GQ L H ET E L + + V+ A GW
Sbjct: 166 CGKEHALILTNSGDVYSCGGGS-RGQLGL---GHVETREQPCLVEDLTGVRMKCVGAGGW 221
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H ++++E G++Y WGW E R+ + ++ Q A P P+DK G
Sbjct: 222 -HSMAISELGDLYVWGWNESGQLGLPCRNISTQSPPAEERHRYQLASP----EPADKATG 276
Query: 174 E--EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGK 230
V T S + E+ G P ++ V + KVA G RH+ +++G+
Sbjct: 277 TWFTRVDLENTVSGQCEAHIQRVGPVQVQSEPTVLDFGEDVTLVKVAGGARHSAVVTGE 335
>gi|293401317|ref|ZP_06645461.1| oligopeptide/dipeptide ABC transporter, permease protein
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|373452930|ref|ZP_09544837.1| hypothetical protein HMPREF0984_01879 [Eubacterium sp. 3_1_31]
gi|291305443|gb|EFE46688.1| oligopeptide/dipeptide ABC transporter, permease protein
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|371964833|gb|EHO82338.1| hypothetical protein HMPREF0984_01879 [Eubacterium sp. 3_1_31]
Length = 617
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 25 WGYLPGTSPEKSPILS-PIPARLCGGDSWKDV-----------CGGGCGFALATSESGKL 72
+ Y+ G + P+ PI + G + D G F++A ++ GK+
Sbjct: 71 FAYIGGMFRQMDPVYQEPILQNIGPGTGYLDFPSELEGKKIVQISSGITFSVALTDDGKV 130
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WG D G T P L T +VVK AAG H V++T++GEV WG
Sbjct: 131 YAWGKDTD-----------GATEVPSNLGT--NVVKIAAGDRHVVALTDSGEVIGWG 174
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAG 112
GG F+L + +G++ +WG +D+GQ L GK + E P ++ +VV+ G
Sbjct: 99 AGGSEFSLVITTAGEVFSWGR-NDKGQ--LGRGKLSKEEERKPKLMKSLAVCTVVQITCG 155
Query: 113 WAHCVSVTEAGEVYTWG 129
HC+++T+ G +++WG
Sbjct: 156 ANHCLALTDDGRLFSWG 172
>gi|221504892|gb|EEE30557.1| UVb-resistance protein uvr8, putative [Toxoplasma gondii VEG]
Length = 1156
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK-AAAG 112
+ GGG F++A G L TWG +D G + S +G EP L A V G
Sbjct: 675 NFVGGGQFFSVALRTDGCLYTWGQSDFTG--HGCSESYGVVEEPRVLEKLAGQVHWVQCG 732
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++ T+AG +YTWG
Sbjct: 733 SDHCLAATDAGRLYTWG 749
>gi|261329166|emb|CBH12145.1| regulator of chromosome condensation, putative [Trypanosoma brucei
gambiense DAL972]
Length = 838
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 15/90 (16%)
Query: 59 GCGFALATSESGKLITWGSA---------------DDEGQSYLTSGKHGETPEPFPLPTE 103
GC FALA S +G + +WG+ D+ L + P +P+
Sbjct: 576 GCFFALALSATGCVYSWGNIECCGVGDLPLPPEIPDNLVMESLGNDSTASILMPVEVPSL 635
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+++V AAG H +++ AGE+Y WG C
Sbjct: 636 SNIVAVAAGAWHAMALNAAGEIYAWGIGAC 665
>gi|221484712|gb|EEE23006.1| regulator of chromosome condensation, putative [Toxoplasma gondii
GT1]
Length = 1155
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK-AAAG 112
+ GGG F++A G L TWG +D G + S +G EP L A V G
Sbjct: 674 NFVGGGQFFSVALRTDGCLYTWGQSDFTG--HGCSESYGVVEEPRVLEKLAGQVHWVQCG 731
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++ T+AG +YTWG
Sbjct: 732 SDHCLAATDAGRLYTWG 748
>gi|384245633|gb|EIE19126.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 1375
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Query: 29 PGTSPEKSPILSPIP---ARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD---DEG 82
P S + P+ S P A++ GG + + G G + G WGS+D
Sbjct: 205 PAKSLQGQPVGSQPPSSTAKVVGGGTVQGRVTGAMGLPVPEQRPGDCYVWGSSDAGIPPA 264
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
Q + + TP T V + A G H VT +GEVYTWG
Sbjct: 265 QGSICDRQQSATPAIVEDSTHLDVCQVAVGLRHAALVTRSGEVYTWG 311
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G A +E G+L WG G L K
Sbjct: 162 PQKIQAFQGVPIKMVAA---------GAEHTAAVTEDGELYGWGWGR-YGNLGLGDRKDR 211
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
PE LP +V A GW H +SV+ +G +YT+GW
Sbjct: 212 LVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGW 249
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 19 ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
T VY WG + S + +P P R G K + CG LA + G++
Sbjct: 85 HTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIA---CGDSHCLAVTMEGQVQ 141
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ + AAG H +VTE GE+Y WGW
Sbjct: 142 SWGR-NQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGW 197
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + +P LP E V+ + GW H +
Sbjct: 282 GGWRHTMAVTSDGKLYGWG-WNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTL 340
Query: 118 SVTEAGEVYTWG 129
+VTE V++WG
Sbjct: 341 AVTERQNVFSWG 352
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 58/146 (39%), Gaps = 26/146 (17%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKD 152
TP+P + + A G +HC++VT G+V +WG G G +D
Sbjct: 109 TPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWG----------RNQNGQLGLGTTED 158
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
S Q + P AG E T++ E+ E N GD L
Sbjct: 159 SLVPQKIQAFQGVPIKMVAAGAE-----HTAAVTEDGELYGWGWGRYGNLGLGDRKDRLV 213
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
P V+L G K+ VA G RHT+ +S
Sbjct: 214 PEKVSLPHGEKMVMVACGWRHTISVS 239
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A +E GKL WG + GQ + +P P E +V+ A GW H +
Sbjct: 289 GGWRHTMAVAEDGKLYGWG-WNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTL 347
Query: 118 SVTEAGEVYTWG 129
++TE +++WG
Sbjct: 348 ALTENKNIFSWG 359
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 65/176 (36%), Gaps = 29/176 (16%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L+ PE +V A GW H VSV+ +G
Sbjct: 192 AITEGGDLYGWGWGR-YGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGA 250
Query: 125 VYTWGWRECVPSAKVTRDFGSA--GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
+YT+GW + +G G FQ D + + P S G R T
Sbjct: 251 LYTYGWSK----------YGQLGHGDFQ-DHLVPRKLEALKDVPISQISGG-----WRHT 294
Query: 183 SSAREESENPASG----------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ E+ + G D SP V KI +VA G RHTL L+
Sbjct: 295 MAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALT 350
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 19 ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
E +Y WG + S + +P P G K + CG L + +G++
Sbjct: 92 EMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIA---CGDSHCLTVTFNGQVH 148
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ V AAG H ++TE G++Y WGW
Sbjct: 149 SWGR-NQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGW 204
>gi|260804625|ref|XP_002597188.1| hypothetical protein BRAFLDRAFT_276208 [Branchiostoma floridae]
gi|229282451|gb|EEN53200.1| hypothetical protein BRAFLDRAFT_276208 [Branchiostoma floridae]
Length = 473
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA SE G+L WG+++ + +T P P V+ A G C + + G
Sbjct: 305 LAVSEKGELFGWGNSEYNQLASVTETTQVNVPRLLPFDYVGKAVQVAVGGTICAVLNDQG 364
Query: 124 EVYTWGW 130
+VY WG+
Sbjct: 365 QVYVWGY 371
>gi|196007064|ref|XP_002113398.1| hypothetical protein TRIADDRAFT_57517 [Trichoplax adhaerens]
gi|190583802|gb|EDV23872.1| hypothetical protein TRIADDRAFT_57517 [Trichoplax adhaerens]
Length = 509
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 20/118 (16%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAH 115
C LA S G+L WG D +L G + PFP E V A G ++
Sbjct: 394 CECTLALSNDGELFAWGYGD-----FLHPGFFRDDIIPFPYKVEMFNDIKVADFAVGSSN 448
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS-FQKDSTGKQSALPTEQAPPSDKRA 172
+ T+ G+VYTWG+ D+G G+ F++DS + + Q D+ A
Sbjct: 449 GIICTKDGKVYTWGY----------NDYGQLGNGFRQDSLSQLCPVTALQYFKLDRVA 496
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+A+A + +G+L TWG L + T P +++A+ HC +VT
Sbjct: 241 YAMAITSNGQLYTWGCGP------LGNNTTCSTAHPVKALLGKEIIQASCSVTHCAAVTS 294
Query: 122 AGEVYTWG 129
G++YTWG
Sbjct: 295 KGKLYTWG 302
>gi|2981265|gb|AAC06339.1| similar to golgi antigen; similar to U50078 (PID:g1477565), partial
[Homo sapiens]
Length = 371
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SV 106
+ VC CG F LA ++SG + TWG D Y G + P E +
Sbjct: 34 QGVCQIECGAQFLLALTKSGVVWTWGKGD-----YFRLGHRSDVHVRKPQVVEGLRGKKI 88
Query: 107 VKAAAGWAHCVSVTEAGEVYTWG 129
V A G HC++V ++G+VY WG
Sbjct: 89 VHVAVGAQHCLAVMDSGQVYAWG 111
>gi|443705337|gb|ELU01947.1| hypothetical protein CAPTEDRAFT_158323 [Capitella teleta]
Length = 452
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 25/129 (19%)
Query: 46 LCGGD-SWKDVCGGGC--GFALATSESGKLITWGSAD-DEGQSYLTSGKHGETPEPFPLP 101
L GGD +D+ C LA S G L WG+++ D+ S + P P
Sbjct: 262 LVGGDIEGEDIVHLSCKGDTVLAVSGKGDLFGWGNSEYDQLSSVSNNETQVNVPRHLPFS 321
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGW--RECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+ VV++A+ A C+ + + G+VY WG+ C P +QSA
Sbjct: 322 SVGHVVRSASAGAMCLLLNDKGDVYVWGYGLLGCGPQV------------------EQSA 363
Query: 160 LPTEQAPPS 168
LP Q PP+
Sbjct: 364 LPM-QIPPT 371
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A +E GKL WG + GQ + +P P E +V+ A GW H +
Sbjct: 289 GGWRHTMAVAEDGKLYGWG-WNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTL 347
Query: 118 SVTEAGEVYTWG 129
++TE +++WG
Sbjct: 348 ALTENKNIFSWG 359
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 65/176 (36%), Gaps = 29/176 (16%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L+ PE +V A GW H VSV+ +G
Sbjct: 192 AITEGGDLYGWGWGR-YGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGA 250
Query: 125 VYTWGWRECVPSAKVTRDFGSA--GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
+YT+GW + +G G FQ D + + P S G R T
Sbjct: 251 LYTYGWSK----------YGQLGHGDFQ-DHLVPRKLEALKDVPISQISGG-----WRHT 294
Query: 183 SSAREESENPASG----------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ E+ + G D SP V KI +VA G RHTL L+
Sbjct: 295 MAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALT 350
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 19 ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
E +Y WG + S + +P P G K + CG L + +G++
Sbjct: 92 EMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIA---CGDSHCLTVTFNGQVH 148
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ V AAG H ++TE G++Y WGW
Sbjct: 149 SWGR-NQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGW 204
>gi|115470737|ref|NP_001058967.1| Os07g0165200 [Oryza sativa Japonica Group]
gi|113610503|dbj|BAF20881.1| Os07g0165200, partial [Oryza sativa Japonica Group]
Length = 754
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 22 VYMWGYLPG--------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
+Y WG+ G S + + +++P + G +V + +E+G+L
Sbjct: 206 LYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIATEAGELF 265
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TWGS + EGQ S TP +A ++ AA H +V + GEV+TWG
Sbjct: 266 TWGS-NREGQLGYPSVDTQPTPRRVS-SLKARIISVAAANKHSAAVADTGEVFTWG 319
>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 561
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL-TSG 89
T+P +P+ +PA G + V G +LA + +G ++ WG + GQ Y T+
Sbjct: 130 TTPRSTPVAVDLPA----GTTVTAVAAGDR-HSLAVTSTGTVLAWG-LNVTGQLYDGTTT 183
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ TP LP +V AAG AH +++T AG V WG
Sbjct: 184 TNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWG 223
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L G + V G G +LA + +G ++ WG + GQ S TP
Sbjct: 293 TPVAVDLPAGTTVTAVATG-SGHSLAVTSTGTMLAWG-GNGSGQLGDGSTTSSSTPVAVD 350
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
LP +V A G H +++T G + WG+
Sbjct: 351 LPAGTTVTAVAGGAGHSLALTSTGTMLAWGFNT 383
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 64/170 (37%), Gaps = 26/170 (15%)
Query: 70 GKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
G + WG D +S L G + TP LP + ++ AAG H ++VT AG V
Sbjct: 60 GTGLAWG---DNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLA 116
Query: 128 WGWRE--------CVP-SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
WG P S V D + + + G + +L + G V
Sbjct: 117 WGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTST-GTVLAWGLNVTG 175
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + S +P +V L G +T VAAG H+L L+
Sbjct: 176 QLYDGTTTTNSS-----------TPIVVDLPAGTTVTAVAAGNAHSLALT 214
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T+P +P+ +PA G + + +LA + +G ++ WG A+ GQ +
Sbjct: 235 TTPRSTPVAVDLPA----GTTISTIAASSSSHSLAVTSTGTMLAWG-ANFTGQLGDGTIT 289
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ TP LP +V A G H ++VT G + WG
Sbjct: 290 NRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWG 328
>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
harrisii]
Length = 531
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 86/228 (37%), Gaps = 48/228 (21%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I+ LCG K + G L ++E G + WG G S L +G
Sbjct: 55 GTGDNQSTIVPKKLEALCG-KKIKSLSYGSGPHVLLSTEDGVVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
+ P + T V++ A G H +++ GEVY WG+ C G
Sbjct: 111 TTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNC----------GQV 160
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD--EFF----- 199
GS ST Q P+ ++ + +R S A ++ + A D E +
Sbjct: 161 GS---GSTANQ---------PTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYN 208
Query: 200 ------------TLSPCLVTLNPGVKITKVAAGGRHTLILSGKSLESA 235
L+PC V V + ++ G HTL L+ + L A
Sbjct: 209 GNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYA 256
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P ++ K V CG ++A ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V++ G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWG 258
>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
Length = 286
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 21 VVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITW 75
VVY WG + S + P + G K + CG LA + +G++ +W
Sbjct: 87 VVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQIA---CGDSHCLAVTINGEVQSW 143
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G + GQ + P+ LP E VV+ + GW H V++T V++WG
Sbjct: 144 GR-NQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAITGKSNVFSWG 196
>gi|336270150|ref|XP_003349834.1| hypothetical protein SMAC_00722 [Sordaria macrospora k-hell]
gi|380095223|emb|CCC06696.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 620
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
Query: 56 CGGGCGFALATSESGKLITWGSAD------------DEGQSYLTSGKHGETPEPFPLP-T 102
GG +LA ++ G+L+TWG D +E + K +P +P
Sbjct: 485 IAGGEHHSLAANDKGELLTWGRIDGHQVGHPSGSFTEENTIFDEKDKPRILVQPAVVPEI 544
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
E +V AAG H ++TE G+VY+WG+ + + T D
Sbjct: 545 EGKIVHVAAGTDHSFAITEDGKVYSWGFSANYQTGQGTTD 584
>gi|195567859|ref|XP_002107476.1| GD17489 [Drosophila simulans]
gi|194204883|gb|EDX18459.1| GD17489 [Drosophila simulans]
Length = 1505
Score = 44.3 bits (103), Expect = 0.051, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F++A S G+L TWG A G + G P +V A AHC
Sbjct: 366 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 425
Query: 117 VSVTEAGEVYTWG 129
++++ +GEV+ WG
Sbjct: 426 LALSSSGEVFGWG 438
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G G +LA + G + WG D L +G + +P + + V + AG
Sbjct: 315 GSGDAHSLALTSEGLVFAWGDGD---YGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFS 371
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTR 141
V+++ G++YTWG C+ V R
Sbjct: 372 VALSSEGQLYTWGKATCLGHQLVER 396
>gi|355778311|gb|EHH63347.1| RCC1 domain-containing protein 1 [Macaca fascicularis]
Length = 262
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 41/176 (23%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVKAAAGW 113
L +G++ +WG G+HG+ E P EA ++ + AAG
Sbjct: 57 LLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGG 105
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRA 172
H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 106 WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN--------------- 150
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E+ + ++T + + P + F P L+ L G KV+ G RHT +++
Sbjct: 151 -EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVVT 202
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VK + G H VT GE+YTWGW
Sbjct: 174 QPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGW 212
>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 853
Score = 44.3 bits (103), Expect = 0.051, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 14/86 (16%)
Query: 59 GCGFALATSESGKLITWGSAD------DEGQSYLTSGKHGETPE--PFPLPTEAS----- 105
G F +A SE+G+L ++G + E Y+ +G+ + + LP +
Sbjct: 344 GANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESV 403
Query: 106 -VVKAAAGWAHCVSVTEAGEVYTWGW 130
V K A G H ++VT +VYTWGW
Sbjct: 404 KVRKVACGHLHTIAVTTDNDVYTWGW 429
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G ++ A + +G + TWG +++GQ L + P + S+V A G H
Sbjct: 237 AGWAYSAAVTSTGNVYTWG-FNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIACGRQHMA 295
Query: 118 SVTEAGEVYTWG 129
+++++G++YTWG
Sbjct: 296 AISKSGDLYTWG 307
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+V +AGWA+ +VT G VYTWG+ E
Sbjct: 232 IVDISAGWAYSAAVTSTGNVYTWGFNE 258
Score = 37.7 bits (86), Expect = 5.1, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
L P +L G K + CG A LA +E G + +WG EG+ P
Sbjct: 23 LDPAVIQLLKGKRIKQI---ACGEAHSLAVTEFGDVYSWGRGK-EGELGHPQKAMTAPPA 78
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+VK A G H +++T+ G+VY WG
Sbjct: 79 LIKALEHERIVKVACGNYHSLALTDTGKVYQWG 111
>gi|307190578|gb|EFN74560.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 1036
Score = 44.3 bits (103), Expect = 0.052, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 22 VYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS 77
VY WG Y +P ++ K+V CG F + ++ K+ WG
Sbjct: 633 VYTWGENYCGQIEDGNIDTFDSVPRQVHHELEKKNVVHIACGSKFNVVITDENKIYGWGK 692
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D S + S K+ P+ + +VK G+ H +++T GE+Y WG
Sbjct: 693 NDKGQISIVQSEKYYAYPQEI-ITISDKIVKVTCGYDHTLALTNKGEIYAWG 743
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 11/57 (19%)
Query: 88 SGKHGETPEPFPLPTEASVVKA-----------AAGWAHCVSVTEAGEVYTWGWREC 133
S K G+ P +P E++ K A G HC+++T G+VYTWG C
Sbjct: 585 SCKVGDWPHGLHIPKESTFTKVPRLEKKYILDIACGHCHCLALTSDGKVYTWGENYC 641
>gi|219669317|ref|YP_002459752.1| cell wall binding repeat 2-containing protein [Desulfitobacterium
hafniense DCB-2]
gi|219539577|gb|ACL21316.1| putative cell wall binding repeat 2-containing protein
[Desulfitobacterium hafniense DCB-2]
Length = 706
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
PA++ G DS + GG ALA G + WGS ++ G+ L G +P + +
Sbjct: 191 PAQIPGLDSIVAIAAGGT-HALALHMDGSVYAWGS-NERGE--LGDGGSASGYQPVKIAS 246
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWG 129
+++ +AG HC+++ G VY WG
Sbjct: 247 LSNITAISAGLRHCLALGADGSVYAWG 273
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA G + ++GS + + L G P +P S+V AAG H ++
Sbjct: 156 GFDFSLALKNDGTVYSFGSNE---FNQLGDSSVGSRNTPAQIPGLDSIVAIAAGGTHALA 212
Query: 119 VTEAGEVYTWGWRE 132
+ G VY WG E
Sbjct: 213 LHMDGSVYAWGSNE 226
>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
Length = 531
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 29/188 (15%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAA 110
D+ G LA S++G++ +WG G L +G G+ P + T +++ A
Sbjct: 78 DIAFGSGPHVLAVSKNGEMYSWG---HNGYCQLGNGGSGQGLTPTLINTNLQGKKILRVA 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++++ GE++ WG C G GS ST Q A +K
Sbjct: 135 CGSHHSMALSQEGEIFAWGQNNC----------GQVGS---GSTTNQPTPRKVVAVIGNK 181
Query: 171 RAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A + + + E E G+ +PC V GV I+++ G
Sbjct: 182 MALSIACGQTSSMALLENGEVYGWGYNGNGQLGLGNNVNQPNPCRVQQLQGVIISQLVCG 241
Query: 221 GRHTLILS 228
HTL LS
Sbjct: 242 YAHTLALS 249
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F+LA ++ G++ TWG D Y G + P E ++ A G
Sbjct: 2842 GAQFSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGAL 2896
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 2897 HCLAVTDTGQVYAWG 2911
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 38 ILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---- 92
+L+P G + V CG G L + SG + +WG D Y G+ G
Sbjct: 239 VLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGD-----YGKLGRGGTDGS 293
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+TP+ + +VVK G ++T GEVYTWG
Sbjct: 294 KTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWG 330
>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
Length = 4305
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + G + TWG D + S +H P +V A G HCV+
Sbjct: 4204 GSQFSVALCQCGSVYTWGKGDYHRLGH-GSYEHVRRPMRVTGMQGKMIVSIATGSLHCVA 4262
Query: 119 VTEAGEVYTWG 129
T+ GEVYTWG
Sbjct: 4263 CTDTGEVYTWG 4273
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F+LA + G++ TWG D Y G + P EA V+ A G
Sbjct: 3310 GAQFSLALTRDGEVWTWGKGD-----YFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGAL 3364
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT +V+ WG
Sbjct: 3365 HCLAVTSENQVWAWG 3379
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
++P +P LS + R S G ALA + GK+ +WG +D L G
Sbjct: 3131 STPRANPYLSHVLVRRVAVHS-------GGKHALALTADGKVYSWGEGED---GKLGHGN 3180
Query: 91 HGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
P + + A V+ A G AH VT G +YTWG E
Sbjct: 3181 RITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGE 3224
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+ P++ P++ P+ CGG A S +G+L WGS + L G
Sbjct: 255 SEPKRVPVIPPVEEIACGGYH-----------TGAISRNGQLYMWGSNE---YGCLGFGY 300
Query: 91 HGETPEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGEVYTWGW 130
+ P+ E + V + GW H +++T G+V+ WGW
Sbjct: 301 KHQNATSLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGW 345
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 74/186 (39%), Gaps = 19/186 (10%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGW 113
CGG L +E G++ G +D GQ L ++G E E LP EA AAG
Sbjct: 49 CGGA--HTLVLTEEGRVYASG-LNDWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGD 105
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ-----KDSTGKQSALPTEQAPPS 168
H +++E G VY WG R G + Q KD + AL E +
Sbjct: 106 FHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLAL 165
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTL-------SPCLVTLNPGVKITKVAAGG 221
+ EV+ + + R F++ +P LV VK++KVAAG
Sbjct: 166 SEEG--EVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGL 223
Query: 222 RHTLIL 227
H+ L
Sbjct: 224 THSACL 229
>gi|357111495|ref|XP_003557548.1| PREDICTED: uncharacterized protein LOC100828625 [Brachypodium
distachyon]
Length = 1078
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Query: 22 VYMWGYLPG--------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
+Y WG+ G S + + +++P + G +V + +E+G+L
Sbjct: 206 LYTWGFGRGGRLGHPDIQSGQTTAVITPRQVTVGLGRKQVNVVAAAKHHTVIATEAGELF 265
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TWGS + EGQ S TP + ++ AA H +V + GEV+TWG
Sbjct: 266 TWGS-NREGQLGYPSVDTQATPRRVS-SLKQRIISVAAANKHSAAVADTGEVFTWG 319
>gi|391344902|ref|XP_003746733.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 and BTB domain-containing
protein 1-like [Metaseiulus occidentalis]
Length = 550
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGG-GCG--FALATSESGKLITWGSA 78
VY WG S ++ R GG + C G CG F A ++G++ WGS
Sbjct: 168 VYTWGQNNCGQLGLSASVNHQSPRKVGGAIAEMKCTGISCGHNFTTAVFDTGEVYVWGS- 226
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE----ASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L S T +PFP+ E + K A G++H +++T+ G VY WG
Sbjct: 227 NGNGQLGLGS----LTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWG 277
>gi|326436402|gb|EGD81972.1| hypothetical protein PTSG_02656 [Salpingoeca sp. ATCC 50818]
Length = 5125
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY-LTSGKHGETPEPFPLP 101
PA+L G + GC + A +++G+L WG+ G+SY L +G P +
Sbjct: 3290 PAKLDFGRARMTRVICGCNSSAALTDTGQLYVWGT----GRSYRLGTGSMTSHMLPIRVT 3345
Query: 102 TEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
AS +V A+ G H V+V+E G+V+ WG
Sbjct: 3346 DLASHKIVDASLGHEHGVAVSETGDVFVWG 3375
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 14/192 (7%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
PIP L G GG +LA + +G ++ WG + GQ + + TP L
Sbjct: 87 PIPVGLPKGTEVTAAAGGDA-HSLAVTSAGTVLAWGR-NAVGQLGDGTTINRSTPVDVRL 144
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P +V AAG+ H +++T AG V+ WG T G G+ ST +
Sbjct: 145 PPGTTVTAVAAGFNHSLALTSAGTVFAWGDNS-------TGQLGD-GTRTNRSTPVAVSF 196
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--GDEFFT--LSPCLVTLNPGVKITK 216
P+ + G + + +N GD T +P +V L G +T
Sbjct: 197 PSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVVVGLPVGTIVTA 256
Query: 217 VAAGGRHTLILS 228
+A GG H+L ++
Sbjct: 257 IAGGGSHSLAVT 268
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 78/203 (38%), Gaps = 17/203 (8%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ +S +P+ RL G + V G +LA + +G + WG + GQ +
Sbjct: 131 GTTINRS---TPVDVRLPPGTTVTAVAAG-FNHSLALTSAGTVFAWGD-NSTGQLGDGTR 185
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+ TP P+ + AAG H +++T AG V+ WG T G G+
Sbjct: 186 TNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNS-------TGQLGD-GTR 237
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN----PASGDEFFTLSPCL 205
ST LP + G + +AR N G +
Sbjct: 238 TNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNINRDASVH 297
Query: 206 VTLNPGVKITKVAAGGRHTLILS 228
V L PG +T VA G H+L L+
Sbjct: 298 VRLPPGTTVTAVAGGLTHSLALT 320
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 59/151 (39%), Gaps = 22/151 (14%)
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
T+ + P P LP V AA G AH ++VT AG V WG R V
Sbjct: 79 TTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWG-RNAV------------ 125
Query: 147 GSFQKDSTGKQSALPTEQAPPSDK----RAGEE---VVKRRKTSSAREESENPASGDEFF 199
G +T +S + PP AG + T A ++ GD
Sbjct: 126 GQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR 185
Query: 200 T--LSPCLVTLNPGVKITKVAAGGRHTLILS 228
T +P V+ G IT VAAGG H+L L+
Sbjct: 186 TNRSTPVAVSFPSGTVITAVAAGGMHSLALT 216
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA + G +++WGS ++ GQ + + TP LP ++ AAG +
Sbjct: 311 GGLTHSLALTSVGTVLSWGS-NNWGQLGDGTARDRNTPGSVSLPPGVTITAVAAGDLFGL 369
Query: 118 SVTEAGEVYTWG 129
++T AG V WG
Sbjct: 370 ALTSAGTVLAWG 381
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 18/122 (14%)
Query: 53 KDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
++VC G +LA +E GKL TWG + K P + +V+AA
Sbjct: 38 QNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAA 97
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS--FQKDSTG----KQSALPTEQ 164
G HC++V + G Y WG E +G G +KD+TG + A+P
Sbjct: 98 IGGWHCLAVDDQGRAYAWGGNE----------YGQCGEEPEKKDNTGRPPRRDIAIPQRC 147
Query: 165 AP 166
AP
Sbjct: 148 AP 149
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 17/118 (14%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S +P R+ G D + + G LA E G L W
Sbjct: 168 REGHVWTWGQPWPPGDITQIS-----VPVRVQGLDMVRLIAVGAF-HNLALQEDGTLWAW 221
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ + Y G P P+P + ++V AAG H ++T+ GEVY WG
Sbjct: 222 GNNE-----YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWG 274
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 18 KETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
++ ++ WG Y + + P PIP + G + D+ GG + A +++G++
Sbjct: 214 EDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDNGEVYG 272
Query: 75 WGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
WG + + + K + P+ L + +V+ + G H V+VT G ++++G
Sbjct: 273 WGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFG---- 328
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
D G G +K +TG+ +P + PP +
Sbjct: 329 ------RGDHGRLGYGRKVTTGQPEEVPIDIPPPRGR 359
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 5/171 (2%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC+
Sbjct: 91 CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL 150
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G+ +TWG + + ++F S S Q+ + +P Q + +
Sbjct: 151 ALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQRVRS--LEGIPLAQVAAGGAHSFALSL 207
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ DE SPC V L K+ ++ G HT +L+
Sbjct: 208 SGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 55/231 (23%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NSKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
AG S G+ + TE + P ++ ++ + + S A+
Sbjct: 110 -------AG-----SDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
+FFT SP V G+ + +VAAGG H+ LS
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
TSP++ L IP + GG FAL S SG + WG ++ GQ L+ K
Sbjct: 179 TSPQRVRSLEGIPLA-------QVAAGGAHSFAL--SLSGAVFGWG-MNNAGQLGLSDEK 228
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|401403916|ref|XP_003881605.1| putative regulator of chromosome condensation [Neospora caninum
Liverpool]
gi|325116018|emb|CBZ51572.1| putative regulator of chromosome condensation [Neospora caninum
Liverpool]
Length = 1162
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 35/73 (47%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GGG F++A G L TWG +D G S E P+ + G HC
Sbjct: 615 GGGQFFSVALRTDGLLYTWGQSDFTGHGCSKSYGMVEEPQILEKLERHPLRWVQCGSDHC 674
Query: 117 VSVTEAGEVYTWG 129
V+VTEAG +YTWG
Sbjct: 675 VAVTEAGCLYTWG 687
>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+P + G + + GG G +LA + +G ++ WG ++EGQ + + TP L
Sbjct: 182 PVPVNVPAGTTITAIAGG-RGHSLALTSTGTVLAWGK-NNEGQLGDGTNANSTTPVDVDL 239
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
P +V A G ++ ++T AG V WG
Sbjct: 240 PPGTTVTAIAGGGSNSFALTSAGTVLAWGLNS 271
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 40 SPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
+P+ L G + + GGG FAL + +G ++ WG + GQ + TP
Sbjct: 233 TPVDVDLPPGTTVTAIAGGGSNSFAL--TSAGTVLAWG-LNSSGQVGDGTTTDRSTPVDV 289
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
LP +V A G H V++T AG V WG
Sbjct: 290 DLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNS 323
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 18/122 (14%)
Query: 53 KDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
++VC G +LA +E GKL TWG + K P + +V+AA
Sbjct: 38 QNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAA 97
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS--FQKDSTG----KQSALPTEQ 164
G HC++V + G Y WG E +G G +KD+TG + A+P
Sbjct: 98 IGGWHCLAVDDQGRAYAWGGNE----------YGQCGEEPEKKDNTGRPPRRDIAIPQRC 147
Query: 165 AP 166
AP
Sbjct: 148 AP 149
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 17/118 (14%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S +P R+ G D + + G LA E G L W
Sbjct: 168 REGHVWTWGQPWPPGDITQIS-----VPVRVQGLDMVRLIAVGAF-HNLALQEDGTLWAW 221
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ + Y G P P+P + ++V AAG H ++T+ GEVY WG
Sbjct: 222 GNNE-----YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWG 274
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 18 KETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
++ ++ WG Y + + P PIP + G + D+ GG + A +++G++
Sbjct: 214 EDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDNGEVYG 272
Query: 75 WGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
WG + + + K + P+ L + +V+ + G H V+VT G ++++G
Sbjct: 273 WGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFG---- 328
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
D G G +K +TG+ +P + PP +
Sbjct: 329 ------RGDHGRLGYGRKVTTGQPEEVPIDIPPPRGR 359
>gi|395861750|ref|XP_003803141.1| PREDICTED: RCC1 domain-containing protein 1 [Otolemur garnettii]
Length = 376
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 73/182 (40%), Gaps = 43/182 (23%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ EP P EA + +
Sbjct: 166 GAEHALLLGWAGQVFSWGG-----------GRHGQLGHGSLEAEPEPRLLEALQGLPMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G+VY WGW E A TR +L ++AP +
Sbjct: 215 VAAGGWHSVCVSETGDVYVWGWNESGQLALPTR-----------------SLAEDRAPAA 257
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLI 226
+ G + +A E PA F ++ P L+ L G K + G RHT +
Sbjct: 258 VEATGLNKDESEVKRAAVGEDGAPAP---FISIQPFPALLDLPLGSDAAKASCGSRHTAV 314
Query: 227 LS 228
++
Sbjct: 315 VT 316
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + KA+ G H VT GE+YTWGW
Sbjct: 288 QPFPALLDLPLGSDAAKASCGSRHTAVVTRTGELYTWGW 326
>gi|32398881|emb|CAD98591.1| uvb-resistance protein, possible [Cryptosporidium parvum]
Length = 1415
Score = 43.9 bits (102), Expect = 0.058, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG F LA +G L +WG D L +G + ++ P + E V +AG HC
Sbjct: 1048 CGAFFTLALDHNGDLFSWGQGRD---GSLGTGSYEDSFVPQKIKLENKVKSFSAGMFHCG 1104
Query: 118 SVTEAGEVYTWGWRE 132
++ E ++Y WG E
Sbjct: 1105 AIDEKNQLYVWGSNE 1119
>gi|66475666|ref|XP_627649.1| protein with C-terminal RCC1 domain [Cryptosporidium parvum Iowa II]
gi|46229084|gb|EAK89933.1| protein with C-terminal RCC1 domain [Cryptosporidium parvum Iowa II]
Length = 1444
Score = 43.9 bits (102), Expect = 0.058, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG F LA +G L +WG D L +G + ++ P + E V +AG HC
Sbjct: 1077 CGAFFTLALDHNGDLFSWGQGRD---GSLGTGSYEDSFVPQKIKLENKVKSFSAGMFHCG 1133
Query: 118 SVTEAGEVYTWGWRE 132
++ E ++Y WG E
Sbjct: 1134 AIDEKNQLYVWGSNE 1148
>gi|361125476|gb|EHK97517.1| putative protein pim1 [Glarea lozoyensis 74030]
Length = 524
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGK---------HGETPEPFPLPTEASVVK 108
GG ++A +E G + WG DD GQS + K E P PT +K
Sbjct: 398 GGSHHSIAFTEDGTTLVWGRCDD-GQSGIDLDKIPEDDIIFDAREKPRILVKPTAVPGIK 456
Query: 109 A---AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
+ AAG +C++VT G+ Y+WG+ E + + T D
Sbjct: 457 SVAVAAGIDNCIAVTMEGQAYSWGFSESYRTGQGTTD 493
>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Oryctolagus
cuniculus]
Length = 531
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H + +
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVL 143
Query: 120 TEAGEVYTWGWREC 133
GEVY WG+ C
Sbjct: 144 AADGEVYAWGYNNC 157
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 19 ETVVYMWGYLP------GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESG 70
E VY WG+ G S + + +P P + G K + CG LA + +G
Sbjct: 85 EHQVYSWGWGDFGRLGHGNSTD---VFTPQPVKALQGIKIKQLA---CGDSHCLAVTMAG 138
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
++++WG + GQ L + + P+ SV AAG H +VTE G++Y WGW
Sbjct: 139 EVLSWGR-NQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGW 197
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ +P P E V + A GW H +
Sbjct: 282 GGWRHTMALTSDGKLYGWG-WNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTL 340
Query: 118 SVTEAGEVYTWG 129
+ TE V+ WG
Sbjct: 341 AFTEKKNVFAWG 352
>gi|281202678|gb|EFA76880.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 934
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 17/99 (17%)
Query: 40 SPIPARLC----GGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
SP+P L GG + + GGC ++ A E+G L TWG+ DD S K TP
Sbjct: 120 SPVPILLSMSTFGGQRVRMIAAGGC-YSAAVLENGLLYTWGTLDDT-----QSSKSLATP 173
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGE-----VYTWG 129
L V+ A G H V E VYTWG
Sbjct: 174 TKVDLL--KGVICVALGLNHVAVVAETNTPEKRAVYTWG 210
>gi|70982263|ref|XP_746660.1| Ran exchange factor Prp20/Pim1 [Aspergillus fumigatus Af293]
gi|66844283|gb|EAL84622.1| Ran exchange factor Prp20/Pim1, putative [Aspergillus fumigatus
Af293]
gi|159122104|gb|EDP47226.1| Ran exchange factor Prp20/Pim1, putative [Aspergillus fumigatus
A1163]
Length = 544
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 24/142 (16%)
Query: 22 VYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
VY WG G +++ I+ P G + +CGG +LA S+ G+ +
Sbjct: 370 VYAWGLNSFGETGIREGAGDDEAAIIHPTVVDSLSGKNIVQLCGG-AHHSLAVSKDGQCL 428
Query: 74 TWGSAD------------DEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWAHCVSVT 120
WG D D+ G+ EP PLP +ASVV AAG H +++
Sbjct: 429 VWGRLDGFQTGLKVDTLPDDAVVKDERGRPRILIEPTPLPGIKASVV--AAGSDHSIAID 486
Query: 121 EAGEVYTWGWRECVPSAKVTRD 142
G ++WG+ + + T+D
Sbjct: 487 VDGRAWSWGFSATYQTGQGTQD 508
>gi|46127591|ref|XP_388349.1| hypothetical protein FG08173.1 [Gibberella zeae PH-1]
Length = 594
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 21/133 (15%)
Query: 18 KETVVYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSES 69
KE VVY WG + + E ++ PA+L D + GG +LA S+
Sbjct: 399 KEGVVYGWGLNNFGEIGVESNAGEDDAVILR-PAKLTYLDDYNITEIDGGEHHSLACSDK 457
Query: 70 GKLITWGSAD------------DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G L+TWG D +E Y G +P P +V AAG +
Sbjct: 458 GDLLTWGRVDGYQVGFEFDKLSEENSIYDERGNARILFKPTIQPDVKDIVSVAAGTDNNF 517
Query: 118 SVTEAGEVYTWGW 130
+++ G VY+WG+
Sbjct: 518 AISSNGTVYSWGF 530
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
S +G L+T+G +D GQ L +H TP+ + V + A G H V++ + G+
Sbjct: 3289 VVSNNGDLLTFG-MNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGD 3347
Query: 125 VYTWGWRE 132
VY++G E
Sbjct: 3348 VYSFGKNE 3355
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 28 LPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQ 83
L T K P+L IP R D+ CG+ + E GK++TWG +D GQ
Sbjct: 3361 LSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGR-NDYGQ 3419
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ S +H + PLP + V +A+ G H + + G +G
Sbjct: 3420 LGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVNGRPMVFG 3465
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G E+ +L PI A + + GC +A +++G +WG D + G
Sbjct: 416 GNFDERVMLLRPIQALRSHRVKYINA-SNGCEHLIAITDTGLAYSWGYNDRGQLGHENVG 474
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
P+ E + AA + H V+ +GE+YT+G +C
Sbjct: 475 TKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDC 518
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL-TS 88
G E+ + SPIPA L G GC LA S G + +WG +D GQ L T+
Sbjct: 3201 GNFDERLIVPSPIPA-LSGIPITMVAASNGCEHMLAISHDGAVYSWG-YNDRGQLGLGTT 3258
Query: 89 GKHGETPEPF-PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
TP L + + AA + H V+ G++ T+G +
Sbjct: 3259 VSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMND 3303
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 64/172 (37%), Gaps = 24/172 (13%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
S SG+L T+G +D GQ L +H TP+ V + G H V T +GEV
Sbjct: 504 VSVSGELYTFG-MNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEV 562
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD---------KRAGEEV 176
+T G D G G KQ +PT+ P++ A
Sbjct: 563 FTCG----------KNDHGQLGL----GHNKQVKVPTQVVLPNELVCFVACGYYHATAIT 608
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
S R + G + P +T++ ++ A G HTL++S
Sbjct: 609 STGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMS 660
>gi|194206275|ref|XP_001917412.1| PREDICTED: RCC1 domain-containing protein 1 [Equus caballus]
Length = 197
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 18/134 (13%)
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P P + + AAG H VSV+E G+VY WGW E A TR G K
Sbjct: 22 PRPLEALQGLPMAEVAAGGWHSVSVSETGDVYIWGWNESGQLALPTRSLAEDG---KTVA 78
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G+ + L G +V + T+ + + P + F P L+ L G +
Sbjct: 79 GEAAGL---------HEGGPDV---KSTAGGEDGAPTPFIAVQPF---PALLDLPRGSEA 123
Query: 215 TKVAAGGRHTLILS 228
K + G RHT +++
Sbjct: 124 VKASCGSRHTAVVT 137
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 109 QPFPALLDLPRGSEAVKASCGSRHTAVVTRTGELYTWGW 147
>gi|345856409|ref|ZP_08808895.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
gi|344330533|gb|EGW41825.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
Length = 1419
Score = 43.9 bits (102), Expect = 0.069, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
++P K LS + GGD+ +LA + GK+ WG+ D GQ L G
Sbjct: 643 STPVKVKGLSQVTKIAAGGDT-----------SLAITADGKVWAWGNNQD-GQ--LGDGT 688
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P +P + V + GW HC+++ G V+ WG
Sbjct: 689 TNNQSTPVLVPGLSDVTTVSVGWTHCLALKSDGGVWAWG 727
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 22 VYMWGYLP--GTSPEKSPILSPIPARLCGGDSWKDVCG--GGCGFALATSESGKLITWGS 77
V+ WG P + + L P+ A+ + DV G ALA G + +WGS
Sbjct: 70 VWGWGTGPLGNNDADSNSALVPVQAK-----NLTDVIAISAGGDVALALKNDGTVWSWGS 124
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ G+ L G P P+P+ + + A G+++C+++ G V+ WG
Sbjct: 125 -NQYGE--LGDGSTTNRNSPAPVPSLSGISAIATGYSYCLALKNDGTVWAWG 173
>gi|384248236|gb|EIE21721.1| hypothetical protein COCSUDRAFT_83510, partial [Coccomyxa
subellipsoidea C-169]
Length = 184
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 69 SGKLITWGSADD--EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
+G + TWG D G Y G P+ +A V K +G HC ++TE G+VY
Sbjct: 73 AGAVYTWGWNKDGQLGHGYNEPGCSRPRLVESPMLADAHVAKVCSGSRHCAALTEGGDVY 132
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDST 154
TWGW FG GS K S+
Sbjct: 133 TWGWNA----------FGQLGSGCKTSS 150
>gi|67624817|ref|XP_668691.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54659872|gb|EAL38433.1| hypothetical protein Chro.30249 [Cryptosporidium hominis]
Length = 2080
Score = 43.9 bits (102), Expect = 0.071, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 14/79 (17%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAA 110
GCG ++A + GKL TWG ++ HG P P E V A+
Sbjct: 1501 GCGSDHSMAITADGKLFTWG------ENIFGQCGHGHNYSYIPSPKMIEPLKEEQVYMAS 1554
Query: 111 AGWAHCVSVTEAGEVYTWG 129
AG HC VT+ G V+ WG
Sbjct: 1555 AGARHCGVVTQNGAVFMWG 1573
>gi|66359204|ref|XP_626780.1| myosin fused to 3 IQ motifs (that interact with calmodulin) and Rcc1
domain [Cryptosporidium parvum Iowa II]
gi|46228195|gb|EAK89094.1| myosin fused to 3 IQ motifs (that interact with calmodulin) and Rcc1
domain [Cryptosporidium parvum Iowa II]
Length = 2083
Score = 43.9 bits (102), Expect = 0.071, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 14/79 (17%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAA 110
GCG ++A + GKL TWG ++ HG P P E V A+
Sbjct: 1501 GCGSDHSMAITADGKLFTWG------ENIFGQCGHGHNYSYIPSPKMIEPLKEEQVYMAS 1554
Query: 111 AGWAHCVSVTEAGEVYTWG 129
AG HC VT+ G V+ WG
Sbjct: 1555 AGARHCGVVTQNGAVFMWG 1573
>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 560
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ ++S +P+ L GG + V G F+LA S +G ++ WGS + GQ +
Sbjct: 280 GTTADRS---TPVAVSLSGGTTVTAVAAG-IAFSLALSSAGAVLAWGS-NSSGQLGDGTT 334
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TP P +V A G AH ++VT G WG
Sbjct: 335 ADRSTPVTVSSPAGTTVTAIAGGDAHGLAVTSVGAAIAWG 374
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T P ++P++ +P+ G + V GG +LA + +G ++ WGS + GQ +
Sbjct: 230 TIPSRTPVVVSLPS----GVTATAVAGGDL-HSLAVTSAGAVLAWGS-NSSGQLGDGTTA 283
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TP L +V AAG A ++++ AG V WG
Sbjct: 284 DRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWG 322
>gi|189204344|ref|XP_001938507.1| hypothetical protein PTRG_08175 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985606|gb|EDU51094.1| hypothetical protein PTRG_08175 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 558
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD------ 79
GY + + +L P G + ++ G +A ++ G+++ WG D
Sbjct: 393 GYTANAGADDASVLQPKIIHSLEGKNVTELAAG-SHHNIAITKDGEVLVWGRCDGSQTGL 451
Query: 80 ---------DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
DE + +GK +P PLP +V A G H + + +AG+ Y+WG+
Sbjct: 452 PPSQLEAETDEDKVLKNNGKPKILVQPTPLPGLKDIVTGACGPDHTIVIDKAGKAYSWGF 511
Query: 131 RECVPSAKVTRD 142
+ + T D
Sbjct: 512 SANYQTGQGTDD 523
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 40 SPIPARLCGGDS-WKDVCGG-GCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPE 96
+P+P+ D+ + D+ G C FAL T G + WG+ +EG G H P
Sbjct: 234 TPVPSEFFPEDTIFVDIAAGDSCSFALTTE--GAVYGWGTFRKNEGILGFERGNH-TAPR 290
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P L + V++ G H ++ + VY WG
Sbjct: 291 PVYLDSVKKVIQLVCGTNHVYALDKDHHVYAWG 323
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 10/132 (7%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
DS + GG A +SGKL +WG + GQ + S P P + V
Sbjct: 274 DSRIVLIAGGWRHTSAADDSGKLYSWG-WNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLL 332
Query: 110 AAGWAHCVSVTEAGEVYTWG------WRECVP---SAKVTRDFGSAGSFQKDSTGKQSAL 160
+ GW H +VTEAG+V++WG P +A V S GS + + G ++
Sbjct: 333 SCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIKLEDLGVSASP 392
Query: 161 PTEQAPPSDKRA 172
T PP+D+ A
Sbjct: 393 LTTYVPPADRYA 404
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+ P P R G +++ CG LA +++G+L ++G + GQ L + P
Sbjct: 107 VFIPQPIRALAG---RNIVKVACGDTHTLAVTDTGELFSFGR-NQNGQLGLGTTSDAILP 162
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+P V A G H ++ T AG+V+ WGW
Sbjct: 163 QPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGW 197
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
+Y WGY G S P P R+ K V G CG ++A +G++ WG
Sbjct: 149 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + TP +++ A G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
A ++ + TG +S + +P E VV+ SA + SG +
Sbjct: 259 -------ANTYGQLGTGNKS---NQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVY 308
Query: 199 F 199
Sbjct: 309 M 309
>gi|209880359|ref|XP_002141619.1| IQ calmodulin-binding motif family protein [Cryptosporidium muris
RN66]
gi|209557225|gb|EEA07270.1| IQ calmodulin-binding motif family protein [Cryptosporidium muris
RN66]
Length = 2164
Score = 43.5 bits (101), Expect = 0.074, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 14/79 (17%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE------TPEPFPLPTEASVVKAA 110
GCG ++ A + GKL TWG + GQ HG +PE E + A+
Sbjct: 1534 GCGTDYSAAITYDGKLFTWGD-NTFGQC-----GHGHDIDYVSSPEVLKALKEEQIYMAS 1587
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G HC VT+ G VY WG
Sbjct: 1588 CGSRHCAVVTQNGAVYIWG 1606
>gi|389742932|gb|EIM84118.1| RCC1/BLIP-II [Stereum hirsutum FP-91666 SS1]
Length = 471
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 74/199 (37%), Gaps = 54/199 (27%)
Query: 62 FALATSESGKLITWGSAD-DEGQSYLTSGKHG-ETPEPFPLPTEA-----SVVKAAAGWA 114
ALA G+L WG +EG T+G G ++ P+P PT A + A G
Sbjct: 131 LALALDAEGQLRQWGMFKMNEG----TTGFDGIKSSAPYPTPTPAFPKKTEISNVACGSN 186
Query: 115 HCVSVTEAGEVYTWGW------------------RECVPSAKVTRDFGSAG-----SFQK 151
H +++T +G VYTWG R VP A R+ + G SF
Sbjct: 187 HVLALTTSGHVYTWGSNREFQLGRKVLSRNRKVDRAYVPEALHLRNIVAVGASSCTSFAV 246
Query: 152 DSTGKQ---SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
D G A Q SD+R GEE V T SE
Sbjct: 247 DHQGVVFAWGANNLRQTGISDQRGGEESVISTPTIVDALASER----------------- 289
Query: 209 NPGVKITKVAAGGRHTLIL 227
+ G K+ ++ G HTL L
Sbjct: 290 HGGSKVIQIEGGSDHTLFL 308
>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 954
Score = 43.5 bits (101), Expect = 0.077, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
V++WG PG S S +L+P + G S ++ GG L S +G + S++D
Sbjct: 213 VFLWGRPPGWSHTNS-LLTPQKVDVLPGQSIAEIACGG-NHILYLSSAGDVY---SSEDH 267
Query: 82 GQSYLTSGKHGETPEPFPLPTEASVVKA---------AAGWAHCVSVTEAGEVYTWG 129
S +TP+ L E ++ KA A G H V++T AGEVY+WG
Sbjct: 268 AISTTEPTNMLQTPQ---LVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWG 321
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 5/178 (2%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 538 QHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 597
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S S Q+ +P Q
Sbjct: 598 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGA 654
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + + DE SPC V L K+ ++ G HT +L+
Sbjct: 655 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 712
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG + + V CGG L E G++ T G
Sbjct: 458 WGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLL--EDGEVYTCG-L 514
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 515 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA-------- 564
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 565 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 612
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 613 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 660
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
TSP++ L IP + GG FAL S SG + WG ++ GQ L+ K
Sbjct: 633 TSPQRVRSLEGIPLA-------QVAAGGAHSFAL--SLSGAVFGWG-MNNAGQLGLSDEK 682
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 683 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 725
>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
Length = 988
Score = 43.5 bits (101), Expect = 0.077, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G ++A S+ G+L WGS + GQ + SG + P +P+ V+ A G +H V
Sbjct: 107 AGRSHSMAVSDDGRLFAWGS-NSHGQLAM-SGDILASDTPKRVPSLPETVQVACGASHTV 164
Query: 118 SVTEAGEVYTWG 129
S+ G V+ WG
Sbjct: 165 SLNGGGRVFIWG 176
>gi|170581639|ref|XP_001895769.1| hypothetical protein [Brugia malayi]
gi|158597158|gb|EDP35375.1| conserved hypothetical protein [Brugia malayi]
Length = 916
Score = 43.5 bits (101), Expect = 0.078, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G ++A S+ G+L WGS + GQ + SG + P +P+ V+ A G +H V
Sbjct: 107 AGRSHSMAVSDDGRLFAWGS-NSHGQLAM-SGDILASDTPKRVPSLPETVQVACGASHTV 164
Query: 118 SVTEAGEVYTWG 129
S+ G V+ WG
Sbjct: 165 SLNGGGRVFIWG 176
>gi|384247688|gb|EIE21174.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 367
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 23 YMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
Y WG YL + K+ + P L G + K + GG +A + G++ T+G+++
Sbjct: 224 YFWGPYLRQSPLTKAATEANEPEVLSGVQNVKQLALGGRHL-VALTHGGRVATYGTSE-- 280
Query: 82 GQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
L G + P PF L + S+ + AAGW H VT G++ TWGW V S
Sbjct: 281 -YGLLGLGS-SDPPSPFQPTLIPDVSLEQVAAGWQHSAGVTSDGQLLTWGWGGSVGS 335
>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 531
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ +K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 11/130 (8%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S ++ LCG K + G L +
Sbjct: 32 NEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPHVLLS 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G + WG G S L +G + P + T VV+ A G H +++ G
Sbjct: 91 TEDGVVYAWGH---NGYSQLGNGTTNQGVAPIQVCTNLLIKKVVEVACGSHHSMALAADG 147
Query: 124 EVYTWGWREC 133
EV+ WG+ C
Sbjct: 148 EVFAWGYNNC 157
>gi|301118074|ref|XP_002906765.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108114|gb|EEY66166.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 330
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 37 PILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
P L +P C K VC F L +ESGKL T G A+ GQ + GE
Sbjct: 49 PALVELPEGEC---VKKIVCSTALTFLL--TESGKLFTLG-ANSYGQCGI-----GEEGV 97
Query: 97 PFPLPTEASV-----VKAAAGWAHCVSVTEAGEVYTWG 129
LPT ++ V AAG+ H ++VT+ G V+TWG
Sbjct: 98 SVQLPTHVNIDGDEIVDIAAGYQHGLAVTKNGTVFTWG 135
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
GD D+ G LA +++G + TWG + GQ +G + + P+ + K
Sbjct: 109 GDEIVDIAAG-YQHGLAVTKNGTVFTWGKGE-RGQLGFGTG-NADAPQELIALKGKKIAK 165
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
AG+ H +V++ GE++ WG
Sbjct: 166 VGAGFNHSCAVSDDGELFLWG 186
>gi|146185478|ref|XP_001031903.2| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|146143053|gb|EAR84240.2| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1349
Score = 43.5 bits (101), Expect = 0.081, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
++G+L WG + GQ +S + P +P +V+ GW H ++++ +G+VY+
Sbjct: 981 QTGELYLWGKGN-SGQLGNSSFNSSKVPILANIPQTIPIVQVVCGWQHSMALSSSGQVYS 1039
Query: 128 WGWRE 132
WG E
Sbjct: 1040 WGLGE 1044
Score = 40.8 bits (94), Expect = 0.48, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 22 VYMWGYLPGTSPE---------KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
+Y+WG G S + K PIL+ IP + + VCG ++A S SG++
Sbjct: 985 LYLWG--KGNSGQLGNSSFNSSKVPILANIPQTI---PIVQVVCG--WQHSMALSSSGQV 1037
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFP-LPTEASVVK-AAAGWAHCVSVTEAGEVYTWG 129
+WG + EGQ + TP+ +A +K + G +H +++E G++YTWG
Sbjct: 1038 YSWGLGE-EGQLGHNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISEEGDLYTWG 1095
>gi|268569112|ref|XP_002640436.1| Hypothetical protein CBG08488 [Caenorhabditis briggsae]
Length = 985
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
S P L G + G +LA ++ G++ WGS + + E P+
Sbjct: 52 FSIYPVSLTSGVGIVQIAAGRAH-SLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRI 110
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
E VV+ A+G HC+++TE G VY WG
Sbjct: 111 NQLNE--VVQVASGSDHCIALTEDGRVYVWG 139
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G +A +E G++ WG D G+ PE +V+ AG H
Sbjct: 119 VASGSDHCIALTEDGRVYVWGEQAD--------GRCIHHPELVEHLNAIPIVRVEAGARH 170
Query: 116 CVSVTEAGEVYTWG 129
CV+++ +G V+TWG
Sbjct: 171 CVAISASGAVFTWG 184
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
+Y WGY G S P P R+ K V G CG ++A +G++ WG
Sbjct: 155 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGY- 213
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + TP +++ A G+AH +++T+ G +Y WG
Sbjct: 214 NGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWG--------- 264
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
A ++ + TG +S + +P E VV+ SA + SG +
Sbjct: 265 -------ANTYGQLGTGNKS---NQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVY 314
Query: 199 F 199
Sbjct: 315 M 315
>gi|321478161|gb|EFX89119.1| hypothetical protein DAPPUDRAFT_304656 [Daphnia pulex]
Length = 454
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-ASVVKAAAGWAHCVSVTE 121
LA ++ G++ WG+++ TS TP PLP+ +V A C+ + +
Sbjct: 284 VLALNDKGQVFGWGNSEYGQLRLATSEMQLHTPRHLPLPSSLGKIVDVATTGTACLILND 343
Query: 122 AGEVYTWGW 130
AGEV+ WG+
Sbjct: 344 AGEVFVWGY 352
>gi|397472457|ref|XP_003807760.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 domain-containing protein 1
[Pan paniscus]
Length = 377
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 25/173 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 167 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 223
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 224 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 267
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ ++T A + + P + F P L L G K + G RHT +++
Sbjct: 268 GSQVKRTGGAEDGAPAPFIAVQPF---PALPDLPMGSDAVKASCGSRHTAVVT 317
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 289 QPFPALPDLPMGSDAVKASCGSRHTAVVTRTGELYTWGW 327
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 43.5 bits (101), Expect = 0.083, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P K P+ PIP L + CG ++A +E G++++WG D + T
Sbjct: 73 PTKRPL--PIP-ELQAYVVIQIACGSR--HSMALTEWGQILSWGDNDCGQVGHSTDNDVI 127
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
E P+ +VV+ A G H +++T GE+Y+WG
Sbjct: 128 ELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWG 164
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
+Y WGY G S P P R+ K V G CG ++A +G++ WG
Sbjct: 155 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGY- 213
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + TP +++ A G+AH +++T+ G +Y WG
Sbjct: 214 NGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWG--------- 264
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
A ++ + TG +S + +P E VV+ SA + SG +
Sbjct: 265 -------ANTYGQLGTGNKS---NQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVY 314
Query: 199 F 199
Sbjct: 315 M 315
>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
Length = 1051
Score = 43.5 bits (101), Expect = 0.086, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD------- 169
+++ G+ +TWG + + ++F S S Q+ + +P Q
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFSSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 170 ----------KRAGEEVVKRRK--TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
AG+ + K A +++EN G SPC V L K+ +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKGIKQGALDKTEN-IRGLYSNRESPCHVKLLRTQKVVYI 265
Query: 218 AAGGRHTLILS 228
+ G HT +L+
Sbjct: 266 SCGDEHTAVLT 276
Score = 40.0 bits (92), Expect = 0.95, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFSSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G GF A + G L TWG + L G G+ EP L + VV A G H +
Sbjct: 866 GHGFCAAITNRGLLYTWGKG-----TALGLGPSGDVSEPTHLSSIDGVVSVACGDIHAAA 920
Query: 119 VTEAGEVYTWG 129
+T+ G++Y WG
Sbjct: 921 LTDKGQLYMWG 931
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 43.5 bits (101), Expect = 0.088, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P K P+ PIP L + CG ++A +E G++++WG D + T
Sbjct: 73 PTKRPL--PIP-ELQAYVVIQIACGSR--HSMALTEWGQILSWGDNDCGQVGHSTDNDVI 127
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
E P+ +VV+ A G H +++T GE+Y+WG
Sbjct: 128 ELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWG 164
>gi|17510153|ref|NP_490834.1| Protein HERC-1 [Caenorhabditis elegans]
gi|351051254|emb|CCD73459.1| Protein HERC-1 [Caenorhabditis elegans]
Length = 1019
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +A E G++ WG D G+ PEP + +V+ AG HC++
Sbjct: 153 GSNHCIALDEGGRVFVWGEQAD--------GRCIHRPEPVEQLSGVPIVRVLAGARHCLA 204
Query: 119 VTEAGEVYTWG 129
++ +G V+TWG
Sbjct: 205 LSASGAVFTWG 215
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G ++ ++ G++ WGS ++ GQ + S K P + +V+ A+G HC+
Sbjct: 101 AGRSHTVSVTDDGRVFAWGS-NEHGQLGMES-KFTWQGTPRRVQEINDIVQVASGSNHCI 158
Query: 118 SVTEAGEVYTWG 129
++ E G V+ WG
Sbjct: 159 ALDEGGRVFVWG 170
>gi|261404982|ref|YP_003241223.1| S-layer domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261281445|gb|ACX63416.1| S-layer domain protein [Paenibacillus sp. Y412MC10]
Length = 1074
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEAS----VVKAAAG 112
G + LA E G L++WG + GQ S G + P+P VV +AG
Sbjct: 270 GNDYTLALKEDGTLLSWG-VNGYGQLGSDTLQGTYSNYPKPVLDKASGDAFGHVVDISAG 328
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
AH ++ E G V+TWG S +T G ++ G+ + LP
Sbjct: 329 IAHVAAIREDGSVWTWGGNTIWGSGDITGQLGRGDDRLEERPGRVTRLP 377
>gi|302753302|ref|XP_002960075.1| hypothetical protein SELMODRAFT_163545 [Selaginella moellendorffii]
gi|300171014|gb|EFJ37614.1| hypothetical protein SELMODRAFT_163545 [Selaginella moellendorffii]
Length = 1051
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
LCG K+V +AT E G++ TWG+ + EGQ + TP A
Sbjct: 233 LCG-RRVKNVAAAKHHTIVAT-EGGEVYTWGT-NREGQLGYPAVDTQSTPRRVST-LRAK 288
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV+ AA H +VTE+GEVYTWG
Sbjct: 289 VVEVAAANKHSAAVTESGEVYTWG 312
>gi|367040685|ref|XP_003650723.1| hypothetical protein THITE_2110495 [Thielavia terrestris NRRL 8126]
gi|346997984|gb|AEO64387.1| hypothetical protein THITE_2110495 [Thielavia terrestris NRRL 8126]
Length = 589
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE--GQSYLTSGKHG--- 92
++ P + G D+ GG +LA ++ G+LITWG D GQ + +
Sbjct: 437 VMRPQLIKSLAGYEIADIAGGEH-HSLACTKDGQLITWGRIDGHQVGQPSASFSEDNTIW 495
Query: 93 ---ETPE----PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
+ P P +P VV+ AAG H ++T G+VY+WG+ + + T D
Sbjct: 496 DERQKPRILLVPTVVPDIGGVVRVAAGTDHSFAITADGKVYSWGFSANYQTGQGTTD 552
>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
terrestris]
Length = 539
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 8 REENEKMEECKETVVY-----MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
+ NE + K+ +VY +G L GT S I LCG S K G
Sbjct: 34 KAANETLIVTKDDMVYGIGNNTYGCL-GTGDTHSTIYPKKIEALCG-KSVKTFAYGKGPH 91
Query: 63 ALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVS 118
LA +E GK+ +WG D + G S G TP P L E VV A G H ++
Sbjct: 92 VLALTEEGKVYSWGYNDYCELGNR---STNEGLTPTLIPSALNNEF-VVDIACGGHHSLA 147
Query: 119 VTEAGEVYTWG 129
+T GEVY WG
Sbjct: 148 LTNKGEVYAWG 158
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 22 VYMWGY-----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
VY WGY L S + + IP+ L CGG +LA + G++ WG
Sbjct: 101 VYSWGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVDIACGGH--HSLALTNKGEVYAWG 158
Query: 77 SADDEGQSYLTSGKHGETPEPFP-----LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ + G T +P P + VV + G + V+VT+ GEVY+WG
Sbjct: 159 H-NVSGQ--VGCGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWG 213
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 22 VYMWGYLPGTSPEKSPIL-------SPIPARLCGGDSWKDVCGGGCGF--ALATSESGKL 72
VYMWG +P P+L +P +L +S D+ GF + A +G+L
Sbjct: 655 VYMWGRGSVKNPP-VPVLGIPQIEDQLLPIKL---ESLTDIVVVSIGFYHSAAVRANGEL 710
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGW 130
+TWG +EGQ L G EP + + S + + G H + +T+ G+VYTWG
Sbjct: 711 LTWG-VGEEGQ--LGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGS 767
Query: 131 RE 132
E
Sbjct: 768 SE 769
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHCVSVT 120
A+ S L+TWGSA + + + K P P LP + + ++G + ++T
Sbjct: 591 AIHLDTSRGLMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALT 650
Query: 121 EAGEVYTWG 129
E G+VY WG
Sbjct: 651 ENGDVYMWG 659
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 43.1 bits (100), Expect = 0.096, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 43 PARLCGGDSWKDVC-GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
P RL +++ C G +LA + G++ +WGS + GQ ++G P P +
Sbjct: 80 PQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS-NAVGQ-LGHDAENGRQPTPRMIK 137
Query: 102 TEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
+ VV+ A+G HC+++T GE+Y WG
Sbjct: 138 AIGAKHVVQIASGQYHCLALTNNGELYAWG 167
>gi|156356052|ref|XP_001623745.1| predicted protein [Nematostella vectensis]
gi|156210473|gb|EDO31645.1| predicted protein [Nematostella vectensis]
Length = 383
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 22 VYMWGYLPGTSPEKSPILS-PIPARLCG--GDSWKDVCGGGCGFALATSESGKLITWGSA 78
VY WG S + S P+P R+ G D+ G + ++ G++ TWG A
Sbjct: 215 VYCWGSNQHGQCGASLLQSVPVPMRVRGPLNDACVREIHSGWSHVVVATDQGRVYTWGRA 274
Query: 79 D-------DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
D DE Q ++G + EP + V + A G H ++++ G+V TWGW
Sbjct: 275 DYGQLGGGDELQ------QNGHSAEPREVKCLRGVKQLACGAEHSIAISGDGQVRTWGWN 328
Query: 132 E 132
E
Sbjct: 329 E 329
>gi|294868608|ref|XP_002765605.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
gi|239865684|gb|EEQ98322.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
Length = 1287
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 38 ILSPIPARLCG---GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
I +P P CG G + + G A A S SG L TWGS + +GQ + H E
Sbjct: 221 ITTPKPVLNCGQTYGVPIRQISAGD-AHACAISISGVLFTWGS-NRKGQLGRENAGHREV 278
Query: 95 -PEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P P LP +V A+ G H +V + G+VY WG
Sbjct: 279 LPGPVSCLPPTKAVQMASCGAQHTAAVVQGGQVYLWG 315
>gi|242047524|ref|XP_002461508.1| hypothetical protein SORBIDRAFT_02g003750 [Sorghum bicolor]
gi|241924885|gb|EER98029.1| hypothetical protein SORBIDRAFT_02g003750 [Sorghum bicolor]
Length = 1049
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Query: 22 VYMWGYLPG--------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
+Y WG+ G S + + +++P + G +V + +E+G+L
Sbjct: 184 LYTWGFGRGGRLGHPDIQSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIATETGELF 243
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TWGS + EGQ S TP + ++ AA H +V + GEV+TWG
Sbjct: 244 TWGS-NREGQLGYPSVDTQPTPRRVS-SLKQRIISVAAANKHSAAVADTGEVFTWG 297
>gi|345563579|gb|EGX46567.1| hypothetical protein AOL_s00097g637 [Arthrobotrys oligospora ATCC
24927]
Length = 588
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 58 GGCGFALATSESGKLITWGSAD---------DEGQSYLTSGKHGE---TPEPFPLPTEAS 105
GG + A ++ GKL+TWG D D Y +HG+ EP +P S
Sbjct: 437 GGEHHSAAVTDDGKLLTWGRLDANQLGIKAEDLKSEYTVYDEHGKPRFITEPTVVPNLPS 496
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ K A G H +++ G+ ++WG+ E
Sbjct: 497 ISKVACGTHHNIAIDVYGKAHSWGFGE 523
>gi|328866562|gb|EGG14946.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1117
Score = 43.1 bits (100), Expect = 0.098, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 26/103 (25%)
Query: 40 SPIPARLCG---GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
S IP + G G K V GGC F+ A E+G L TWG+ DD G+S
Sbjct: 150 SSIPLLISGVFNGLKVKMVASGGC-FSAAVLENGLLYTWGTLDDIGKSTTI--------- 199
Query: 97 PFPLPTEASVVKA----AAGWAHCVSV------TEAGEVYTWG 129
LPT+ ++K + G H V TE VYTWG
Sbjct: 200 ---LPTKVDLIKGVTSVSVGLNHIAVVAESNTPTEKRAVYTWG 239
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S +P R+ G ++ + + G LA E G L W
Sbjct: 167 REGYVWTWGQPWPPGDIKQIS-----VPVRVQGLENVRLIAVGAF-HNLALKEDGTLWAW 220
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ + Y G P +P+P + ++V AAG H ++T GEVY WG
Sbjct: 221 GNNE-----YGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG 273
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA + GKL TWG + K TP +V+AA G HC+
Sbjct: 45 GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCL 104
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V + G Y WG E +G G KD TG+ P + KR +++
Sbjct: 105 AVDDQGRAYAWGGNE----------YGQCGEEPSKDETGR----PVRRDIVIPKRCAQQL 150
Query: 177 VKRR 180
R+
Sbjct: 151 TVRQ 154
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 76/198 (38%), Gaps = 52/198 (26%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWA 114
CG+ ++A + +G ++ WG D S L G+ + PFP P A ++ + G
Sbjct: 1548 ACGYQHSVAITYAGTVLAWG---DNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSE 1604
Query: 115 HCVSVTEAGEVYTWGWRE----------CVPSAKVTR-------DFGSAGSFQKDSTGKQ 157
H +++ G+V++WG E PS K+ DF G G
Sbjct: 1605 HTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCG-------GLH 1657
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP------- 210
S + T+ R+ S R E + FT C +T
Sbjct: 1658 SLVLTKN--------------RQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLE 1703
Query: 211 GVKITKVAAGGRHTLILS 228
GV + ++AAG H+L L+
Sbjct: 1704 GVGVIQIAAGEAHSLALA 1721
>gi|389742775|gb|EIM83961.1| RCC1/BLIP-II [Stereum hirsutum FP-91666 SS1]
Length = 463
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADD--EGQSYLTSGK-HGETPEPFPLPTEASVVKA 109
+C CG LA + G + TWG+ + G+ + K +G PEP PL +V
Sbjct: 147 ICSVACGEDHVLALTTFGTVYTWGNGVNFQLGRKIMERRKANGLRPEPLPLK---DIVLV 203
Query: 110 AAGWAHCVSVTEAGEVYTWG---WREC-VPSAK 138
AAG H +V + G VY WG R+C V +AK
Sbjct: 204 AAGHHHSFAVDKKGVVYAWGLNQMRQCGVSNAK 236
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S +P R+ G ++ + + G LA E G L W
Sbjct: 167 REGYVWTWGQPWPPGDIKQIS-----VPVRVQGLENVRLIAVGAF-HNLALKEDGTLWAW 220
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ + Y G P +P+P + ++V AAG H ++T GEVY WG
Sbjct: 221 GNNE-----YGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG 273
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA + GKL TWG + K TP +V+AA G HC+
Sbjct: 45 GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCL 104
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V + G Y WG E +G G KD TG+ P + KR +++
Sbjct: 105 AVDDQGRAYAWGGNE----------YGQCGEEPSKDETGR----PVRRDIVIPKRCAQQL 150
Query: 177 VKRR 180
R+
Sbjct: 151 TVRQ 154
>gi|302804628|ref|XP_002984066.1| hypothetical protein SELMODRAFT_40379 [Selaginella moellendorffii]
gi|300148418|gb|EFJ15078.1| hypothetical protein SELMODRAFT_40379 [Selaginella moellendorffii]
Length = 1023
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
LCG K+V +AT E G++ TWG+ + EGQ + TP A
Sbjct: 212 LCG-RRVKNVAAAKHHTIVAT-EGGEVYTWGT-NREGQLGYPAVDTQSTPRRVST-LRAK 267
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV+ AA H +VTE+GEVYTWG
Sbjct: 268 VVEVAAANKHSAAVTESGEVYTWG 291
>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
Length = 646
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 28 LPGTSPEKSPILSPIPA-----RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
LP ++P LS I L + K VCG LA S SG+++ +G + G
Sbjct: 287 LPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKN--HTLALSSSGEVVGFG-FNACG 343
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
Q L +G H + P + V+ A+G+ H + +T+ GE Y+WG+
Sbjct: 344 Q--LGNGNHMDQLYPVKIEFNEHVIDIASGYYHSLCLTDNGEAYSWGY 389
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK--HG-ETPEPFPLPTEA----SVVKAAA 111
G ++ S G+L T+G T+G+ HG E P+ P P + S+V AA
Sbjct: 201 GSQHSMIVSNYGELYTFGCG--------TTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAA 252
Query: 112 GWAHCVSVTEAGEVYTWGWR 131
G H V G++Y+WGW
Sbjct: 253 GVMHSSCVDSNGKIYSWGWN 272
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 19 ETVVYMWGYLPGT---SPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
E VY WG+ + + +P P + G K + CG LA + +G+++
Sbjct: 85 EHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA---CGDSHCLAVTMAGEVL 141
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ SV AAG H +VTE G++Y WGW
Sbjct: 142 SWGR-NQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGW 197
>gi|401423780|ref|XP_003876376.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492618|emb|CBZ27895.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1743
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 14 MEECKETVVYMWGY-LPG---TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSES 69
M ++ +Y WG+ + G T PE S +L+P+ R G DVC G F + +
Sbjct: 663 MALAGDSALYCWGHNVYGQCLTMPEASHVLTPVRLR-AGVYKILDVCFGQF-FGVLLFDD 720
Query: 70 GKLITWGSADDEGQSYLTSG-KHGETPE---------PFPLPTEASVVKAAAGWAHCVSV 119
G + TWG A G + + G + TP+ L T + AG H +++
Sbjct: 721 GVMGTWGVASMLGCNMSSKGLEQSLTPDRCKCSRQIVHLQLATPTPMAAVRAGPWHALAI 780
Query: 120 TEAGEVYTWG 129
++ GEVYTWG
Sbjct: 781 SQKGEVYTWG 790
>gi|422294826|gb|EKU22126.1| hect domain and rld 4, partial [Nannochloropsis gaditana CCMP526]
Length = 516
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 65/167 (38%), Gaps = 35/167 (20%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
L G+ WG EGQ L + H TP P + + + A G + VTEA
Sbjct: 347 VLGLGVDGRAYAWGYGS-EGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEA 405
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP-TEQAPPSDKRAGEEVVKRRK 181
G +YTWG +G G + + S LP E PP V K
Sbjct: 406 GRLYTWG-------------YGDGGWLGLE---RASKLPYVEPCPP--------VTKYGA 441
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
T S +F P +V+ +++ KV AGG HT+I++
Sbjct: 442 TCSFD---------SDFNACLPAVVSTLSHLRVEKVVAGGGHTIIMA 479
>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1132
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG G LA ++SG++ +WG D + S + + + L E VV+A+ G+ H
Sbjct: 381 GGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAE-HVVQASCGFKHSA 439
Query: 118 SVTEAGEVYTWG 129
+T+ G+V+T+G
Sbjct: 440 VLTKDGKVFTFG 451
>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 546
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 78/203 (38%), Gaps = 32/203 (15%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE----- 93
L+P+ L G + V G ++A + +G ++ WG G S+ G+ G+
Sbjct: 128 LTPVGVSLPAGVTASAVAAG-RDHSVALTSAGTVLAWG-----GNSF---GQLGDGTVVD 178
Query: 94 --TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA--GSF 149
TP LP +V AAG H V++T AG V WG FG G+
Sbjct: 179 RSTPVAVALPPSTTVTAVAAGATHSVALTSAGTVLAWGGNP----------FGQLGDGTV 228
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN----PASGDEFFTLSPCL 205
ST ALP + G V + N G +P +
Sbjct: 229 VDRSTPVAVALPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRSTPTV 288
Query: 206 VTLNPGVKITKVAAGGRHTLILS 228
V+L GV + VAAG H+L L+
Sbjct: 289 VSLPAGVTASAVAAGRIHSLALT 311
>gi|156094440|ref|XP_001613257.1| guanidine nucleotide exchange factor [Plasmodium vivax Sal-1]
gi|148802131|gb|EDL43530.1| guanidine nucleotide exchange factor, putative [Plasmodium vivax]
Length = 2237
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%), Gaps = 29/117 (24%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+PIP +C K CG ++LA SE G L WG D +S L G + EP
Sbjct: 671 TPIPINVCVHKIVKIACG--YNYSLALSERGLLYGWGKND---RSQLGIGVTKDCYEPVH 725
Query: 100 LPTEASVVKAAAGWAH--CV----------------------SVTEAGEVYTWGWRE 132
L + + V+ AG H C+ S E GE+YTWG E
Sbjct: 726 LKSLSRVIDVYAGHDHSACIVNDSFDEDLPRGDSQEVYLSSESSLERGELYTWGNAE 782
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ +WG D L S ++ P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ +WG D L S ++ P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|354583775|ref|ZP_09002673.1| S-layer domain-containing protein [Paenibacillus lactis 154]
gi|353197655|gb|EHB63136.1| S-layer domain-containing protein [Paenibacillus lactis 154]
Length = 1513
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 13/68 (19%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
++LA + SGK+I WGS + GQS P E+ VV AAG+ H +++T
Sbjct: 131 YSLALTSSGKVIAWGS-NSYGQS------------DVPEEAESGVVAIAAGYWHSLALTA 177
Query: 122 AGEVYTWG 129
AGEV WG
Sbjct: 178 AGEVIAWG 185
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 50 DSWKDV--CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
D W V GG +LA + G+++ WGS +G+T PL ++++V
Sbjct: 35 DRWGGVQQIAGGRYHSLALTADGEVLAWGS-----------NGYGKTT--VPLEAQSNIV 81
Query: 108 KAAAGWAHCVSVTEAGEVYTWG 129
+AG H +++T GEV WG
Sbjct: 82 SVSAGQDHSLALTSGGEVIAWG 103
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 19/105 (18%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 63 GEQPERIPALETLNVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ ET P+ +++ A G H V+++E G+V++WG
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG 153
>gi|168058994|ref|XP_001781490.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667031|gb|EDQ53670.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 489
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 75/190 (39%), Gaps = 45/190 (23%)
Query: 64 LATSESGKLITWGSADDE---GQSYLTSGK-----HGETPEPFPLPTEASVVKAAAGWAH 115
LA ++SG+L +WG + +LT + HG + F ++ AAAG H
Sbjct: 279 LAVTKSGQLFSWGYGSNYCLGHDDFLTELRPKRVEHGGFDDLF-------IISAAAGDEH 331
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
++ G VYTWG C G+ G G P A RA +
Sbjct: 332 SAAIDSLGYVYTWGKGYC----------GALG----HGAGTDQRTPLVVAALKSTRAVQV 377
Query: 176 VVKRRKTSSAREES---------------ENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
V +RRKT + + ++ D + + L+ G K++ +AAG
Sbjct: 378 VARRRKTFVLGDNGTVHSFGWMAYHSLGVQGKSASDTVVSPQSLDLALH-GHKVSTIAAG 436
Query: 221 GRHTLILSGK 230
HTL+++ K
Sbjct: 437 MYHTLVITRK 446
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 12/78 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTE-----ASVVKAAAG 112
G G+ +A + +G+L +WG + GQ G T E F P E V + +AG
Sbjct: 221 GQGYTVALTRNGELFSWG-CNSHGQL-----GQGNTQEQFRPRQIEEFNESNPVAQVSAG 274
Query: 113 WAHCVSVTEAGEVYTWGW 130
H ++VT++G++++WG+
Sbjct: 275 ICHTLAVTKSGQLFSWGY 292
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 7/186 (3%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPT 102
L G + + + CG ++A S+ G++ +WG+ D GQ LT+ + T P
Sbjct: 77 LIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLN 135
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ ++++ + G HC+++ G+ +TWG + + ++ S S Q+ +P
Sbjct: 136 QQTILQISCGNWHCLALAADGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPL 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S DE SPC V L K+ ++ G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 223 HTLILS 228
HT +L+
Sbjct: 253 HTAVLT 258
Score = 37.7 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
SP++ L IP + GG FAL S SG + WG + GQ L+ +
Sbjct: 180 SPQRVKSLDGIPLA-------QVAAGGAHSFAL--SLSGAVFGWGK-NSSGQLGLSDERD 229
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 230 RESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 35 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCG-KKIKSLSYGSGPH 93
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H V++
Sbjct: 94 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVAL 150
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 151 AADGEVFAWGYNNC 164
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 156 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 214
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V + G+AH +++T+ G +Y WG
Sbjct: 215 NGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 265
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 19/105 (18%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 63 GEQPERIPALETLNVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ ET P+ +++ A G H V+++E G+V++WG
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG 153
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA SE G++++WG D + T + + P+ +VV+ A G H ++
Sbjct: 98 GSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157
Query: 119 VTEAGEVYTWG 129
+T GE+Y+WG
Sbjct: 158 LTSCGELYSWG 168
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAH 115
CG ++A S+ G++ +WG+ D GQ LT+ + T P + ++++ + G H
Sbjct: 90 ACGESHSVALSDQGQVFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH 148
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
C+++ G+ +TWG + + ++ S S Q+ +P Q +
Sbjct: 149 CLALAADGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPLAQVAAGGAHSFAL 205
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + S DE SPC V L K+ ++ G HT +L+
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
Score = 37.7 bits (86), Expect = 4.5, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
SP++ L IP + GG FAL S SG + WG + GQ L+ +
Sbjct: 180 SPQRVKSLDGIPLA-------QVAAGGAHSFAL--SLSGAVFGWGK-NSSGQLGLSDERD 229
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 230 RESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Score = 37.7 bits (86), Expect = 4.6, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CGG L E G++ T G + +GQ L G PEP +V A G +H
Sbjct: 41 CGGNHSVFLL--EDGEVYTCG-LNTKGQ--LGHESEGSKPEPIGALAGQHIVHVACGESH 95
Query: 116 CVSVTEAGEVYTWG 129
V++++ G+V++WG
Sbjct: 96 SVALSDQGQVFSWG 109
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 52 WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAA 110
+K + G C LA +E G+L +WG + +GQ L S E TP + +V+ A
Sbjct: 86 FKKIACGSC-HTLAVNEWGQLFSWG-CNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G H +++T GE+Y+WG
Sbjct: 144 CGIEHSIALTNDGELYSWG 162
>gi|241651044|ref|XP_002411264.1| RCC1 and BTB domain-containing protein, putative [Ixodes
scapularis]
gi|215503894|gb|EEC13388.1| RCC1 and BTB domain-containing protein, putative [Ixodes
scapularis]
Length = 533
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
LA ++SG L++WG + Q G P + V A G H +++T A
Sbjct: 86 VLAVTQSGDLLSWGH-NGYCQLGNNCNTQGLVPSSIVVTMHHQVAHVACGSHHSLALTCA 144
Query: 123 GEVYTWGWREC 133
GEVY WG C
Sbjct: 145 GEVYAWGQNNC 155
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 17/145 (11%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WG G S P P ++ G + G CG ++A E+G++ WG
Sbjct: 147 VYAWGQNNCGQVGSGSTTNQPTPRKVTSGIGGRRCIGIACGQTSSMAVMENGEVFGWGY- 205
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
G L G + P + VV G+AH +++++ G +YTWG
Sbjct: 206 --NGNGQLGLGNNVNQTSPCRVTNLQGVV-VVCGYAHTMALSDEGVLYTWG--------- 253
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTE 163
+G G+ K + +PTE
Sbjct: 254 -ANSYGQLGTGNKANQVSPFRMPTE 277
>gi|194758819|ref|XP_001961656.1| GF14822 [Drosophila ananassae]
gi|190615353|gb|EDV30877.1| GF14822 [Drosophila ananassae]
Length = 453
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 46 LCGGDSWKD-----VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET----PE 96
L GGD K+ C C LA +E+G + WG+++ GQ L +H ET P
Sbjct: 262 LIGGDIAKEKIVRVTCSSDC--VLALNEAGDVFGWGNSE-YGQ--LDDSEHAETQINTPR 316
Query: 97 PFPLPTEASVVK-AAAGWAHCVSVTEAGEVYTWGW 130
L +K AAG + C+++T+ G VYTWG+
Sbjct: 317 ALKLTKGIGRIKDVAAGGSFCMALTDEGLVYTWGF 351
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 19/105 (18%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 63 GEQPERIPALETLNVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ ET P+ +++ A G H V+++E G+V++WG
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG 153
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 43.1 bits (100), Expect = 0.12, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 76/210 (36%), Gaps = 28/210 (13%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G E +P+ P + G K+V GG L + G + T GS + GQ L
Sbjct: 13 GIGVEGNPVFEPRICHVFSGRGLKEVACGG-QHTLFLLQDGSVYTCGS-NSCGQ--LGHD 68
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
K G +PE + + G AH V+V E G+V+ WG G G
Sbjct: 69 KAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWG-------------AGDGGQL 115
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----NPASGD------EF 198
++ +P D + V + + + + +SG E
Sbjct: 116 GLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGET 175
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
LSP V G+ + ++ AGG H LS
Sbjct: 176 SKLSPSPVKSLAGIPLAQITAGGDHCFALS 205
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 19/105 (18%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 35 GEQPERIPALETLHVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 80
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ ET P+ + +++ A G H ++++E G+V++WG
Sbjct: 81 IGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWG 125
>gi|397609435|gb|EJK60365.1| hypothetical protein THAOC_19295 [Thalassiosira oceanica]
Length = 1106
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 22 VYMWGY--LPGTSPEKSPILS-PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
+Y WG L EKS L+ P G DV GGG A S +G L TWG+
Sbjct: 525 LYTWGVGSLGRLGHEKSRDLNYPTLVDQLKGVQIADV-GGGLSHCAAVSSAGHLYTWGTG 583
Query: 79 DDEGQSYLTSGKHGETPEPF--PLPTE----ASVVKAAAGWAHCVSVTEAGEVYTWG 129
GQ L G+ G E F P+PT+ ++ + G +H + + G++Y WG
Sbjct: 584 -TRGQ--LGFGQLGAEEEEFFCPIPTKLVFPTRALRVSCGNSHTACIGQEGQLYVWG 637
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 19/105 (18%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 63 GEQPERIPALETLHVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ ET P+ +++ A G H V+++E G+V++WG
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG 153
>gi|398016945|ref|XP_003861660.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499887|emb|CBZ34961.1| hypothetical protein, conserved [Leishmania donovani]
Length = 1755
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 26/135 (19%)
Query: 14 MEECKETVVYMWGY-LPG---TSPEKSPILSPIPARL-CGGDSWKDVCGGGCGFALATSE 68
M ++ +Y WG+ + G T PE S +L+P+ RL G DVC G F + +
Sbjct: 664 MALTGDSALYCWGHNVYGQCLTMPEASHVLTPV--RLKAGAYKILDVCFGQL-FGVLLFD 720
Query: 69 SGKLITWGSADDEGQSYLTSGKHGE---TPE-----------PFPLPTEASVVKAAAGWA 114
G + TWG A G + SGK E P+ F PT + V+A W
Sbjct: 721 DGVMGTWGVASMLGCNM--SGKRLEQSLAPDRCKCSRQIVHLQFATPTPMAAVRAGP-W- 776
Query: 115 HCVSVTEAGEVYTWG 129
H +++++ GEVYTWG
Sbjct: 777 HALAISQKGEVYTWG 791
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTS---GKHGETPEPFPLPTEASVVKAAA 111
VCGG F +A + G+++T G A G TS K + P P + + +V AA
Sbjct: 1082 VCGGT--FVVALTADGEVLTHGEAIYCGLGAPTSPTKAKGSDVPVPMRVAGLSDIVAVAA 1139
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H V++T + V+ WG
Sbjct: 1140 GLHHAVAMTASCSVFAWG 1157
>gi|223936015|ref|ZP_03627929.1| Immunoglobulin I-set domain protein [bacterium Ellin514]
gi|223895237|gb|EEF61684.1| Immunoglobulin I-set domain protein [bacterium Ellin514]
Length = 1037
Score = 42.7 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 14/76 (18%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+ALA G ++ WG+ D GQS + PE A+VV AAG H V++ E
Sbjct: 12 YALAVQRDGTVVAWGN-DSAGQS--------DVPEGL-----ANVVAVAAGENHSVALKE 57
Query: 122 AGEVYTWGWRECVPSA 137
G V TWG + VP+
Sbjct: 58 DGTVVTWGAEDIVPAG 73
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 42.7 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 33 PEKSPILSP-----IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
P K P+L P + ++C G +LA S+ G++++WG D + T
Sbjct: 77 PTKRPLLIPELQDYVIIQICCGSR----------HSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + P+ +VV+ A G H +++T GE+Y+WG
Sbjct: 127 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG 168
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 49/215 (22%)
Query: 18 KETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
++ ++ WG Y + + P PIP + G + D+ GG + A ++ G++
Sbjct: 214 EDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDDGEVYG 272
Query: 75 WGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
WG + + + K + P+ L +V+ + G H V++T+ G ++++G
Sbjct: 273 WGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFG---- 328
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA 193
D G G +K +TG+ +PT+ PP K+ S EE+E
Sbjct: 329 ------RGDHGRLGYGKKVTTGQPVEVPTDIPPP-------------KSLSGTEEAE--- 366
Query: 194 SGDEFFTLSPCLVTLNPGVKITK-VAAGGRHTLIL 227
G I K VA GGRHTL +
Sbjct: 367 -----------------GHWIAKLVACGGRHTLAI 384
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + GKL TWG + K P ++V+AA G HC++V +
Sbjct: 50 SLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQ 109
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGS--FQKDSTGK 156
G Y WG E +G G +KD TGK
Sbjct: 110 GRAYAWGGNE----------YGQCGEEPERKDDTGK 135
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 17/118 (14%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S +P R+ G + K + G LA E G L W
Sbjct: 168 REGHVWTWGQPWPPGDIKQIS-----VPVRVQGLEKVKLIAVGAF-HNLALQEDGTLWAW 221
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ + Y G P P+P + ++V AAG H ++T+ GEVY WG
Sbjct: 222 GNNE-----YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 274
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 42.7 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 33 PEKSPILSP-----IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
P K P+L P + ++C G +LA S+ G++++WG D + T
Sbjct: 77 PTKRPLLIPELQDYVIIQICCGSR----------HSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + P+ +VV+ A G H +++T GE+Y+WG
Sbjct: 127 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG 168
>gi|148263541|ref|YP_001230247.1| regulator of chromosome condensation, RCC1 [Geobacter uraniireducens
Rf4]
gi|146397041|gb|ABQ25674.1| regulator of chromosome condensation, RCC1 [Geobacter uraniireducens
Rf4]
Length = 1919
Score = 42.7 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 16/124 (12%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
P R+ WK + G GF +A G L WG + GQ L G P + +
Sbjct: 948 PVRIAIDTDWKSI-SAGAGFTMAIKTDGTLWAWGR-NSNGQ--LGDGSRLNRALPARVGS 1003
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVTRDFGSAGSFQ 150
+ + AGW H V+ G ++TWG R+ +P + S + +
Sbjct: 1004 DTDWTQVYAGWGHVVATKTDGSLWTWGANYSSQLGDGTYERKLLPENSGINNVLSVATLK 1063
Query: 151 KDST 154
+DST
Sbjct: 1064 EDST 1067
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 19 ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
T VY WG + S +L+P P + G + + CG LA + G++
Sbjct: 79 RTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIA---CGDSHCLAVTMEGEVQ 135
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ S+ AAG H +VTE GE++ WGW
Sbjct: 136 SWGR-NQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGW 191
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 42 IPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P RL GD+ + GG +A + GKL WG + GQ +P
Sbjct: 259 VPHRLEALRGDNISQISGG-WRHTMALTTDGKLYGWG-WNKFGQVGAGDNIDHCSPIQIK 316
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + V++ + GW H ++VT+ V++WG
Sbjct: 317 FPQDQKVIQISCGWRHTLAVTDKQNVFSWG 346
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 42.7 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 60 CG--FALATSESGKLITWGS------ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
CG ++A +E+G++ WGS + EGQ S + +T PF +VV+ A
Sbjct: 108 CGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPF------TVVQIAC 161
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++ G +Y WG
Sbjct: 162 GSNHCLALLNNGALYAWG 179
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 19/168 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++ S+SG + WGS + GQ L+ K P + V AAG AH +
Sbjct: 215 GANHSMVLSKSGVIFVWGS-NRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAA 273
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD-KRAGEEVV 177
+T G V+T+GW SF + + S TE P S R ++
Sbjct: 274 LTAHGGVFTFGW-----------------SFYESHEVRISLRGTESNPQSALARKLFSLI 316
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+R + G + L+P + G IT++A G HT+
Sbjct: 317 EREFCRHSYGSYGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCHTV 364
Score = 40.4 bits (93), Expect = 0.69, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 59 GCGFALATSESGKLITWGSADDE--GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G L + G++++ GS D + GQ T+ PEP +V+ G H
Sbjct: 59 GAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTT-----KPEPVTALQCLRIVQVCCGQQHS 113
Query: 117 VSVTEAGEVYTWG 129
+++TEAG+VY WG
Sbjct: 114 MALTEAGQVYMWG 126
>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1055
Score = 42.7 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYL 86
PGTSPE L G + + CG A +A +E G++ WG+ D
Sbjct: 70 PGTSPE-----------LVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLG 118
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
T+ P + + + G HC+++++ G+++TWG
Sbjct: 119 TTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWG 161
Score = 40.0 bits (92), Expect = 0.84, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 22 VYMWGYLPGT-----SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
V+ WG G + E + + + RLC + +CG +A S+ G+L TWG
Sbjct: 104 VFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQ--HCIALSKDGQLFTWG 161
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L GK GE + FP P ++ + K AG H +++ +G V+ WG
Sbjct: 162 Q-NTSGQ--LGLGK-GEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWG 214
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKD-VCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
G E++ + P + G K+ VCGG L G + T GS G L
Sbjct: 13 GIEVERNSMFEPRNCNVFSGRGLKEAVCGGQHSVFLL--HDGSVYTCGS---NGCGQLGH 67
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
K G +PE + + G AH ++V E G+V+ WG
Sbjct: 68 NKPGTSPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWG 108
>gi|384501453|gb|EIE91944.1| hypothetical protein RO3G_16655 [Rhizopus delemar RA 99-880]
Length = 413
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 64 LATSESGKLITWGS--ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
LA SE G + +WG+ D+ + +H + P +P + V+ A+G H +++
Sbjct: 127 LALSEQGNVYSWGTYRGDNGSFGFAEDIQHQKEPLLYPFLKDKIVIDIASGANHSLALCS 186
Query: 122 AGEVYTWGWR 131
G VY WG+
Sbjct: 187 NGRVYAWGYN 196
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-TEASVVKA 109
KD CG ++A G L +WG D++ G+ GE P + + VK
Sbjct: 65 KDFVDIACGGMHSVALDSEGNLYSWGCNDEQAL-----GRAGEEAVPLKIDCNDIKFVKI 119
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A G ++++E G VY+WG
Sbjct: 120 ACGDNATLALSEQGNVYSWG 139
>gi|401410408|ref|XP_003884652.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325119070|emb|CBZ54622.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 575
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 53/117 (45%), Gaps = 17/117 (14%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGC-GFALATSESGKLITWGSADDEGQSYL 86
+ G S SP I A L GG V GG FALA E G L WG + G+ +
Sbjct: 403 MTGASVSFSPYPVLIHALLRGGARAVQVAGGSSQSFALA--EDGALHAWGGS--WGRQPV 458
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWA------HCVSVTEAGEVYTWGWRECVPSA 137
H P P + V K AAGW + V+VT+AG++Y WG C P+A
Sbjct: 459 AMALH---PRFDKSPIKGKVTKLAAGWEERAGEDYAVAVTDAGDLYVWG---CAPAA 509
>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
porcellus]
Length = 531
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A +SG++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V + G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPMRVAALHRVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|345857538|ref|ZP_08809972.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
gi|344329366|gb|EGW40710.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
Length = 732
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G F+LA S GK+ WG+ + + +Y + TP+ + + VVK AAG A
Sbjct: 151 IAAGLEFSLALSSDGKVWAWGANEYKQINYFSDAIKIATPQI--VNNLSGVVKIAAGSAW 208
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRD 142
C+++ G V+TWG + VP +D
Sbjct: 209 CLALKNDGTVWTWG-AQKVPMGNDDQD 234
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+P+L+ AR S G F LA G + WG + EGQ L G P
Sbjct: 32 TPVLASTDARPAAASS---QLAAGANFGLAVDAQGNVWAWGD-NSEGQ--LGQGVADTNP 85
Query: 96 EPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
P+ + +V+ +AG H +++ G V+ WG E
Sbjct: 86 VATPIQVKDLTNVISVSAGGVHALALKADGTVWAWGNNET 125
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 52/227 (22%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
GT +S I +P +L G + + G + ++E G++ WG G S L
Sbjct: 54 GTGDNQSTI---VPKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGH---NGYSQLG 107
Query: 88 SGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
+G + P + T V++ A G H ++++ G+VY WG+ C G
Sbjct: 108 NGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNC----------G 157
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD--EFF--- 199
GS ST Q P+ ++ + + S A ++ + A D E +
Sbjct: 158 QVGS---GSTANQ---------PTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWG 205
Query: 200 --------------TLSPCLVTLNPGVKITKVAAGGRHTLILSGKSL 232
L+PC V GV I ++A G HTL L+ + L
Sbjct: 206 YNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGL 252
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P ++ K V CG ++A ++G++ WG
Sbjct: 148 VYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWG-Y 206
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP +++ A G+AH +++T+ G +Y+WG
Sbjct: 207 NGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWG 257
>gi|224000377|ref|XP_002289861.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975069|gb|EED93398.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 482
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET--PEPFPL 100
P + G + + GG F LA +++G L WG ++EGQ G + E P
Sbjct: 301 PVEMMGAEEVVQIAGG-FAFNLALNKAGILHAWGR-NNEGQLGTGMGLAVDMYAMESIPR 358
Query: 101 PTEAS-----VVKAAAGWAHCVSVTEAGEVYTWGWR 131
P E V + AAG H VT GE++TWG
Sbjct: 359 PIEGDLEGRKVTRVAAGHTHAACVTSNGELFTWGMN 394
>gi|72390898|ref|XP_845743.1| regulator of chromosome condensation [Trypanosoma brucei TREU927]
gi|62175841|gb|AAX69968.1| regulator of chromosome condensation, putative [Trypanosoma brucei]
gi|70802279|gb|AAZ12184.1| regulator of chromosome condensation, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261329163|emb|CBH12142.1| regulator of chromosome condensation, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1152
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 52 WKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPF-PLPTEAS 105
++++C CGF A+A SG L +WG + + GE TP+ L + A
Sbjct: 805 FEELCAVECGFNFAIAIGSSGALYSWGWNTHGQLGHGVAVNLGEAVFTPKEISALKSLAQ 864
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV+ A G +++T+ GEVY+WG
Sbjct: 865 VVQVACGGTFVIALTQCGEVYSWG 888
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 42.7 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G + + L P+P ++ G + K V GG +LA G + WG + G L G
Sbjct: 717 GQLGDGTSTLHPVPVQVPGPSAMKGVAAGG-SHSLAVRSDGTVWAWG---NNGSGELGDG 772
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P P + S V +AG H ++V G V+ WG
Sbjct: 773 TGLQRPRPVQVQGLGSAVAVSAGTNHSLAVQSDGTVWAWG 812
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 64/169 (37%), Gaps = 11/169 (6%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G G++LA G + WG G L G P P + VV AAG +H
Sbjct: 593 AAGNGYSLAVDAQGSVWAWGY---NGMGQLGDGTTTPRVTPTQAPALSGVVALAAGDSHS 649
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G + WG + G A + ++ + L A + A V
Sbjct: 650 LALRADGVAWAWGGND-------QGQLGDATTLERSTPAAVPGLAHVVALAAGN-AHSLV 701
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+ TSS+ + GD TL P V + + VAAGG H+L
Sbjct: 702 LHADGTSSSWGNNAYGQLGDGTSTLHPVPVQVPGPSAMKGVAAGGSHSL 750
>gi|302681079|ref|XP_003030221.1| hypothetical protein SCHCODRAFT_69149 [Schizophyllum commune H4-8]
gi|300103912|gb|EFI95318.1| hypothetical protein SCHCODRAFT_69149 [Schizophyllum commune H4-8]
Length = 550
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 59 GCGFALATSESGKLITWGSAD-------DEGQSYLTSGKHGETPEPFPLPTE----ASVV 107
G F++ ++SGKL +GSA+ D G+ T + E PL + ++V
Sbjct: 200 GISFSVVLTKSGKLYAFGSAEKGQLGNGDTGERLATGQRVVFGIETVPLLIKELANRTIV 259
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR 131
+AG HC+++ +AG V+ WG+
Sbjct: 260 DVSAGQQHCIAIDDAGVVFVWGYN 283
>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
Length = 1386
Score = 42.7 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPLPTEA----SVVKAAAG 112
CG+ + A + G +++WG + HG+T P P EA +++ + G
Sbjct: 973 CGYHHSAAVTSDGMILSWG------RGIFGQLGHGDTENYSLPTPIEALVKIQIIQVSCG 1026
Query: 113 WAHCVSVTEAGEVYTWGWRE 132
W H ++++ G +++WG+ E
Sbjct: 1027 WQHSMALSSQGRIFSWGYGE 1046
>gi|384245915|gb|EIE19407.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 438
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPS------AKVTRDFGSAGSFQKDSTGKQSALP 161
+ AAG HC++VT G+V WGW+ + A V+ + + + G+ +L
Sbjct: 308 RIAAGLGHCLAVTHDGKVVVWGWKHGLAGHPETLLAPVSVPGLPLNTHARLAAGRVHSLI 367
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESEN--PASGDEFFTLSPCLVTLNPGVKITKVAA 219
A +D + E R A +N G P LV G+ I V
Sbjct: 368 ATTAAGADTQQSSETRGRNNALYAFGNGQNGRLGLGSSQSVFEPQLVQDIEGLSIKDVVC 427
Query: 220 GGRHTLILS 228
G H+L+L+
Sbjct: 428 GHDHSLVLT 436
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-E 93
KS +++ I ++ G C ++A G L ++G + GQ L G+ +
Sbjct: 151 KSGLVTDIATKVIG-------CAASGVASIAVGADGALYSFGKSK-RGQLGLGEGRSAAD 202
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
TPE +P + GW H +++TE GEV +WG+ PS + GS Q
Sbjct: 203 TPER--IPGVEGIAAVGCGWGHALALTEDGEVLSWGF----PSGNRLGNLLDGGSAQ 253
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 81/212 (38%), Gaps = 30/212 (14%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G E+S I + L + K+VC GG A+ T SG+LI WG G L G
Sbjct: 22 GAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVIT-HSGELIVWGYG---GCGQLGLG 77
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+ P + + +V+ + H ++ E G +YTWG C S K+ GS
Sbjct: 78 DLKDIVIPRVMTSIKNVINVSCSDRHSAAILEDGRLYTWG---CNKSGKL-----GIGSL 129
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS--SAREESENPA------------SG 195
+ P +K E+V+K S +A N A G
Sbjct: 130 NVNLNNNIICTP----QLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHG 185
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
D +P L+ G+ + + GG HT IL
Sbjct: 186 DTNDVYTPKLIESLAGLSVKNIVCGGHHTAIL 217
>gi|159036732|ref|YP_001535985.1| cell wall anchor domain-containing protein [Salinispora arenicola
CNS-205]
gi|157915567|gb|ABV96994.1| LPXTG-motif cell wall anchor domain [Salinispora arenicola CNS-205]
Length = 566
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG G +LA + +G ++ WG D GQ + TP LPT V AAG H +
Sbjct: 96 GGDGHSLALTSTGSVLAWGDNSD-GQLGDGTTTDTTTPVAVDLPTGTEVTAIAAGNDHSL 154
Query: 118 SVTEAGEVYTWG 129
++T G V WG
Sbjct: 155 ALTSTGSVLAWG 166
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF- 98
+P+ L G + V GG G +LA + I WG D Q L G + P
Sbjct: 235 TPVNVALQPGTTLLAVAGG-SGHSLAITSDNAAIAWG---DNSQGQLGDGTTTDALAPVN 290
Query: 99 -PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
L + AAG H V++T AG +TWG
Sbjct: 291 VALAPGTEITAVAAGRLHSVALTSAGTAFTWG 322
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG + S + P P R G K + CG LA + G++ +WG
Sbjct: 89 VYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIA---CGDSHCLAVTMEGEVQSWG 145
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + + P+ + AAG H V++TE GE+Y WGW
Sbjct: 146 R-NQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGW 198
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 78/208 (37%), Gaps = 35/208 (16%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G ++A +E+G+L WG G L
Sbjct: 163 PQKIQTFQGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 212
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE + + V+ A GW H +SV+ +GE+YT+GW + +G G
Sbjct: 213 CIPEKVSVDCDKMVL-VACGWRHTISVSSSGELYTYGWSK----------YGQLGH---- 257
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
K +P + SDK + R T + + GD S
Sbjct: 258 GDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCS 317
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSGK 230
P V K+ +++ G RHT+ ++ K
Sbjct: 318 PVQVKFPHDQKVAQISCGWRHTIAVTEK 345
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + G+L WG + GQ + +P P + V + + GW H +
Sbjct: 282 GGWRHTMALTTGGQLYGWG-WNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTI 340
Query: 118 SVTEAGEVYTWG 129
+VTE VY+WG
Sbjct: 341 AVTEKDNVYSWG 352
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ ++ S SG+L T+G + GQ K P ++ + + + GW H +
Sbjct: 230 CGWRHTISVSSSGELYTYGWSK-YGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTM 288
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++T G++Y WGW + FG G D+ + S P + P D++ +
Sbjct: 289 ALTTGGQLYGWGWNK----------FGQVGV--GDNVDRCS--PVQVKFPHDQKVAQISC 334
Query: 178 KRRKTSSAREESE 190
R T + E+
Sbjct: 335 GWRHTIAVTEKDN 347
>gi|408501717|ref|YP_006865636.1| putative regulator of chromosome condensation, RCC1
[Bifidobacterium asteroides PRL2011]
gi|408466541|gb|AFU72070.1| putative regulator of chromosome condensation, RCC1
[Bifidobacterium asteroides PRL2011]
Length = 1828
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKD----VCGGGCGFALATSESGKLITWG 76
VY WG G + + I P R+ ++ K G F++A + G + TWG
Sbjct: 239 VYAWGDNSKGELGDSTTINKNTPVRITENEAIKGKTFISVSAGTTFSMALASDGTVYTWG 298
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
D + L +G + P A++ +AG+ H ++++ +G +YTWG E
Sbjct: 299 ---DNSRGELGNGSTTNSSVPVKANLNATITAISAGYWHAMALSSSGTIYTWGDNE 351
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 22 VYMWGYLP--GTSPEKSPILSPIPARLCGGDSWKD----VCGGGCGFALATSESGKLITW 75
VY WG G K+ + P R+ D+ K G +++A + G + TW
Sbjct: 799 VYAWGNQASGGLGNSKNSGTATTPVRITENDAIKGKIFIAVSAGDAYSMALASDGTVYTW 858
Query: 76 GSADDEGQSYLTSGKHGE-TPEPFPLPTE-ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G + G+ L +G G + EP T+ A + +AG A+ +++ G VYTWG
Sbjct: 859 G---NNGKGQLGNGTTGSYSSEPVKAQTDNAKITAISAGRAYAMALASDGTVYTWG 911
>gi|399056402|ref|ZP_10743734.1| Regulator of chromosome condensation (RCC1) repeat containing
protein [Brevibacillus sp. CF112]
gi|398046143|gb|EJL38781.1| Regulator of chromosome condensation (RCC1) repeat containing
protein [Brevibacillus sp. CF112]
Length = 326
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
N + K+ V++WG +S K P ++ G K++ G GF LA + G
Sbjct: 143 NHGLALKKDGTVWLWGNFLNSSYSK-------PFQVGGIADVKEIAAG-SGFNLAVKKDG 194
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ WG +D GQ L + T P + T A++V A G+ ++ G+VY WG+
Sbjct: 195 TVWAWG-YNDSGQ--LGNNNTNNTSSPTKIGTLANIVSVATGYESGYALDVDGKVYAWGY 251
Query: 131 R 131
Sbjct: 252 N 252
>gi|442625191|ref|NP_001259871.1| CG7420, isoform B [Drosophila melanogaster]
gi|440213131|gb|AGB92408.1| CG7420, isoform B [Drosophila melanogaster]
Length = 388
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 55/146 (37%), Gaps = 28/146 (19%)
Query: 65 ATSESGKLITWGSA--DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A ++ +++ WG G + + TP LP + + G H + T A
Sbjct: 268 AVLKNNEILVWGRNCYGQLGMGSFSEQQAIPTPLRLKLPEDQGPARIHMGAEHGLLRTTA 327
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
GEVYTWGW E G+ G+ ++ P S A E+V+RR
Sbjct: 328 GEVYTWGWNE----------HGNCGNNSTENL----------HPNSFTTATSEIVRRRSR 367
Query: 183 SSAREESENPASGDEFFTLSPCLVTL 208
R+ TLSPC V L
Sbjct: 368 ILLRDHRARN------LTLSPCDVLL 387
>gi|388582263|gb|EIM22568.1| RCC1/BLIP-II [Wallemia sebi CBS 633.66]
Length = 581
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 39 LSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET--- 94
L +P ++ G D ++ V G +LA E G++ WGS + G+ G
Sbjct: 174 LETVPMKVDGLDDFRAVNIAAGDYISLAIDEEGQMRAWGSFNSNDGLLGFDGRPGGARKQ 233
Query: 95 --PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P P + VV+A G H +++T +G VY WG
Sbjct: 234 VKPAVLPQLAKHRVVQAVCGADHALALTTSGIVYAWG 270
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 59 GCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAG 112
G +A S+SG ++ +WG D HG + + F PLP +A + + A G
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+HC++VT GEV +WG + G + +DS Q E P A
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQ-------NGQLGLGDT--EDSLVPQKIQAFEGIPIKMVAA 179
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
G E T++ E+ + N GD L P VT G K++ VA G R
Sbjct: 180 GAE-----HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWR 234
Query: 223 HTLILS 228
HT+ +S
Sbjct: 235 HTISVS 240
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 283 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 341
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 342 AVTERNNVFAWG 353
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG + S + +P+P + G K + CG LA + G++ +WG
Sbjct: 89 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEGEVQSWG 145
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + P+ + AAG H +VTE G++Y WGW
Sbjct: 146 R-NQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGW 198
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A ++ G+L WG EGQ L G + P L T+ V+ A G+ H
Sbjct: 147 GADHSVALTDDGELYVWGGGS-EGQ--LGLGDIDDKSTPTLLSTDNKVISVACGYYHTAF 203
Query: 119 VTEAGEVYTWG 129
VT+ GEV+T+G
Sbjct: 204 VTDVGEVFTFG 214
>gi|308070803|ref|YP_003872408.1| RCC1 domain-containing protein [Paenibacillus polymyxa E681]
gi|305860082|gb|ADM71870.1| RCC1 domain-containing protein [Paenibacillus polymyxa E681]
Length = 469
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P P D++K V G G +LA G +++W S ++G+S P+ F
Sbjct: 82 PSPVVSMSSDTFKQVTTGRFG-SLAIKTDGTVVSWQSKKNQGRSI--------APKTFS- 131
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +VVK AAG H +++ ++G+V+ WG
Sbjct: 132 -SLKNVVKIAAGGDHFLALDQSGQVWGWG 159
>gi|281350338|gb|EFB25922.1| hypothetical protein PANDA_008494 [Ailuropoda melanoleuca]
Length = 197
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 34/154 (22%)
Query: 88 SGKHGET------PEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
G+HG+ EP P EA + + AAG H V V+EAG++Y WGW E A
Sbjct: 5 QGRHGQLGHGTLEAEPEPRLLEALQGLPMAEVAAGGWHSVCVSEAGDIYIWGWNESGQLA 64
Query: 138 KVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
TR G + K+++G G E RR +AR E PA
Sbjct: 65 LPTRSLAEDGKTVAKEASGL-------------NEGGSE--GRR---TARAEDGAPAP-- 104
Query: 197 EFFTLS--PCLVTLNPGVKITKVAAGGRHTLILS 228
F L P L+ L + + G RHT +++
Sbjct: 105 -FIALQPFPALLDLPQDADAVQASCGSRHTAVVT 137
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP +A V+A+ G H VT GE+YTWGW
Sbjct: 109 QPFPALLDLPQDADAVQASCGSRHTAVVTRTGELYTWGW 147
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P R+ G ++ + G LA E G+L+ WG+ ++ GQ L +G T P P+
Sbjct: 188 VPVRVQGLEN-VSIIAVGAFHNLALEEDGRLLAWGN-NEYGQ--LGTGDTQPTSHPVPVH 243
Query: 102 --TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ ++V AAG H ++T+ GEVY WG
Sbjct: 244 GLDDLTLVDIAAGGWHSTALTDKGEVYGWG 273
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 42.7 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQ-- 83
LP + + +L+P+P + + K CG+ S G+L TWG+ + +GQ
Sbjct: 1010 LPVVTVDPDLLLNPMPPLV---KNEKKAVSVACGWEHIAVISSDGELFTWGN-NSQGQLG 1065
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
L GK+ TP + ++ + G H V+V ++ ++Y+WG
Sbjct: 1066 HGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWG 1111
Score = 39.3 bits (90), Expect = 1.8, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 21/98 (21%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SPI CGG+ ++A +S ++ +WGS+ Y G TP+ P
Sbjct: 1086 SPIIMISCGGEH-----------SVAVDQSFQIYSWGSS-----RYGQLGHGVLTPQNLP 1129
Query: 100 LPTE-----ASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
E V+ A G+AH + + ++G+++T+GW +
Sbjct: 1130 KKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWND 1167
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 42.7 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
+C CG F +A +++G + TWG D + T H P+ V+ A G
Sbjct: 806 ICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTD-IHVRQPKLVEGLRGKHVIDIAVG 864
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++VT+ GEV++WG
Sbjct: 865 ALHCLAVTQDGEVFSWG 881
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 53 KDVCGGG-----CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
+D+ G G CG F++A ++ G L TWG D + T +H P
Sbjct: 1682 EDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTE-EHVRRPMMVTALFNKI 1740
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
V + G HCV T+ GEVY WG
Sbjct: 1741 VTSISCGSLHCVVCTDEGEVYCWG 1764
>gi|332030031|gb|EGI69856.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Acromyrmex echinatior]
Length = 2956
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 22 VYMWGY-LPGTSPEKSPILS-PIPARLCGGDSWK-DVCGGGCGF--ALATSESGKLITWG 76
+Y WG + G S +L P +C S K +V CG LA + +G + WG
Sbjct: 1911 IYTWGSSVQGCLGTGSSVLRYGTPHAICFFKSMKIEVFSVSCGHCHTLAVTNNG-IYAWG 1969
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
A GQ L +PE + +V A AG H V++T G ++TWGW
Sbjct: 1970 -ASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYHSVALTADGRIFTWGW 2022
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 19 ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
E VY WG + S + +P P + G K + CG LA + +G++
Sbjct: 84 ELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA---CGDSHCLAVTMAGEVQ 140
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 141 SWGR-NQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGW 196
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + + + A GW H +
Sbjct: 281 GGWRHTMALTSEGKLYGWG-WNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTL 339
Query: 118 SVTEAGEVYTWG 129
+++E V++WG
Sbjct: 340 ALSEKKNVFSWG 351
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 17/131 (12%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ + S+SG L T+G + GQ + P ++++ + + GW H +
Sbjct: 229 CGWRHTITVSDSGNLYTYGWSK-YGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTM 287
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++T G++Y WGW + FG G D + P + + P D++ +
Sbjct: 288 ALTSEGKLYGWGWNK----------FGQVGVGNND----DHSSPGQVSFPEDQKISQVAC 333
Query: 178 KRRKTSSAREE 188
R T + E+
Sbjct: 334 GWRHTLALSEK 344
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 65/176 (36%), Gaps = 25/176 (14%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE +V A GW H ++V+++G
Sbjct: 184 AVTEDGDLYGWGWGR-YGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN 242
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D + R T +
Sbjct: 243 LYTYGWSK----------YGQLGH----GDFEDHLVPHKVEALKDSTISQISGGWRHTMA 288
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGK 230
E + G+ SP V+ KI++VA G RHTL LS K
Sbjct: 289 LTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEK 344
>gi|387015158|gb|AFJ49698.1| Regulator of chromosome condensation-like [Crotalus adamanteus]
Length = 424
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
G P K P L +P ++ ++ GG + SE+GK+ T+G +DEG
Sbjct: 43 LGLGPDVLARKRPALLQLPEKIIQAEA------GGV-HTVCLSETGKIYTFG-CNDEGAL 94
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + G P + + VV+ +AG +H ++TE G V+ WG
Sbjct: 95 GRDTSEEGSDAVPGLVDLKEKVVQVSAGDSHTAALTEDGHVFIWG 139
>gi|383847392|ref|XP_003699338.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Megachile
rotundata]
Length = 516
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
VYMW + + + ++ S CG F++ +++G++ +WG+ +
Sbjct: 147 VYMWNINSNVPNDFKQVNVTLNNKIITSIS----CGKN--FSIVITDTGEVYSWGT-NSV 199
Query: 82 GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
GQ + S K + P+ + K G++H ++++ G +Y WG C
Sbjct: 200 GQLGINSRKDVDRPDKITALDGVVIEKVVCGYSHTLALSTTGVLYVWGGNSC 251
>gi|254390857|ref|ZP_05006068.1| immunoglobulin I-set domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|197704555|gb|EDY50367.1| immunoglobulin I-set domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
Length = 650
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T P K+P++ R+ KDV G GC F++A + G L +WG A +GQ L +
Sbjct: 416 TDPTKTPVVVQSLTRV------KDV-GAGCAFSVALGQDGTLWSWG-AGAKGQLGLGAAN 467
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P + + + A G H +++T G+V WG
Sbjct: 468 LTDHNTPQQVKGVSDIAAIAVGCEHVLALTSTGKVKAWG 506
>gi|6957714|gb|AAF32458.1| hypothetical protein [Arabidopsis thaliana]
Length = 314
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHC 116
G LA E G+L+ WG+ ++ GQ L +G T P P+ + ++V AAG H
Sbjct: 144 GAFHNLALEEDGRLLAWGN-NEYGQ--LGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHS 200
Query: 117 VSVTEAGEVYTWG 129
++T+ GEVY WG
Sbjct: 201 TALTDKGEVYGWG 213
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ +WG D L S ++ P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|432862269|ref|XP_004069771.1| PREDICTED: RCC1 domain-containing protein 1-like [Oryzias latipes]
Length = 385
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 36/176 (20%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVK 108
K + GG L T+ +G + TWG S+ G G PE P EA +
Sbjct: 164 KSLALGGEHVILLTA-TGAVYTWGQG-----SHGQLGHGGLLPEEEPRTVEALWGMKMSS 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
+AG H V +++AG++Y WGW E Q LP+++ +
Sbjct: 218 VSAGGWHSVCISDAGDLYVWGWNE----------------------SGQLGLPSQRLRKT 255
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
++ ++ +S+ + E S F P L + P ++ V+ G RHT
Sbjct: 256 SEKKTDQQEGELSQNSSTHQEEVFISIQAF----PALFDVTPLCEVKTVSCGSRHT 307
>gi|55926158|ref|NP_001007510.1| Williams-Beuren syndrome chromosome region 16 [Xenopus (Silurana)
tropicalis]
gi|51258185|gb|AAH79946.1| Williams-Beuren syndrome chromosome region 16 [Xenopus (Silurana)
tropicalis]
Length = 449
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA SE G+L WG+++ + +T P+ P V A G C++V G
Sbjct: 281 LAVSEEGQLYGWGNSEYLQLACVTDSTQVNVPQHLPFQHVGKVKHVACGGTGCIAVNGDG 340
Query: 124 EVYTWGW 130
V+ WG+
Sbjct: 341 SVFVWGY 347
>gi|301112376|ref|XP_002905267.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262095597|gb|EEY53649.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 233
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 69/189 (36%), Gaps = 40/189 (21%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G AL ++SG+++ WG + GQ S + +TP P +V AAG H ++
Sbjct: 47 GSNHALVLTDSGRVVAWGW-NSSGQVAAASKEMVQTPTIVEFPKAVEIVAVAAGGMHSLA 105
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V G V+ WG G K T P+ A P+D V
Sbjct: 106 VDSCGRVWAWG-------CNTYGQLGIGCEMDKLHT------PSLVALPAD-------VH 145
Query: 179 RRKTSSAREESENPASGDEFFT-----------------LSPCLVTLNPGV--KITKVAA 219
++ ++ S + E FT L P +V G+ I +VA
Sbjct: 146 AQRIAAGWAHSAVILTSGEIFTFGWGLYNQLGHSTTQSELQPVIVDALQGLDSNIVQVAC 205
Query: 220 GGRHTLILS 228
G HT L+
Sbjct: 206 GNWHTAALT 214
>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
Length = 1878
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-SVVKAAAGWAHCV 117
G LA + SG+LITWG A G+ S K P P + +V A G H +
Sbjct: 673 GSSHTLALTASGELITWG-AGYYGRLGTNSTKSHSNPIKIRFPIKGVQIVDIAVGSYHSM 731
Query: 118 SVTEAGEVYTWGWRECVPSAK 138
+V+ G+++ WG E V S K
Sbjct: 732 AVSSLGDLWVWGKAENVLSEK 752
Score = 40.0 bits (92), Expect = 0.97, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPFPL---PTEASVVKAAAGWA 114
G +LA S+SG + WG GQ L +G+ + P + PT+ V+ AAG
Sbjct: 174 GANHSLALSDSGLVFAWGI----GQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGAR 229
Query: 115 HCVSVTEAGEVYTWG 129
H + E G+V+ WG
Sbjct: 230 HSLCCNEDGQVFAWG 244
>gi|290986916|ref|XP_002676169.1| predicted protein [Naegleria gruberi]
gi|284089770|gb|EFC43425.1| predicted protein [Naegleria gruberi]
Length = 777
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 20/114 (17%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL--PTE---ASVVKA 109
VCGGG FALA +G ++++G + GQ + + ++ EP + P+E ++V
Sbjct: 214 VCGGGY-FALALLANGNMVSFGD-NSYGQLGVNNPLISKSGEPLLVVKPSELASKTIVDI 271
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
G+ + +++T +G+VYTWG ++G G S+G +S +P +
Sbjct: 272 QCGYDYAMALTSSGDVYTWG----------NNNYGQLGD---GSSGGKSPIPQK 312
>gi|348506950|ref|XP_003441020.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
[Oreochromis niloticus]
Length = 651
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ G K+ G CG ++A ++G++ WG
Sbjct: 269 VFAWGYNNCGQIGSGSTANQPYPRKVTGCLQGKNASGITCGQTSSMALVDNGEVYGWGY- 327
Query: 79 DDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G +G TP + + +G+ HC+++T+ G +Y WG
Sbjct: 328 --NGNGQLGIGNNGNQLTPCRVAALQGMCIQQIVSGYGHCLALTDKGLLYAWG 378
>gi|296089288|emb|CBI39060.3| unnamed protein product [Vitis vinifera]
Length = 1025
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 21/122 (17%)
Query: 22 VYMWGYLPGT---SPE------KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
VY WG+ G PE ++ +++P + G + +E G++
Sbjct: 208 VYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGEV 267
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGEVYT 127
TWGS + EGQ TS + P+P S +V AA H ++E+GEV+T
Sbjct: 268 FTWGS-NREGQLGYTS------VDTQPIPRRVSSLKSKIVAVAAANKHTAVISESGEVFT 320
Query: 128 WG 129
WG
Sbjct: 321 WG 322
>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
Length = 958
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K++ CG +LA S+ G+L WG D GQ L G+ TPE + +V
Sbjct: 147 KNIIQITCGDYHSLALSKGGELFAWGQNLD-GQ--LGVGRIFASTSTPEIVENLSGVPLV 203
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP- 166
+ +AG AH ++++ +G VY+WG +C G ++ K+S AL ++
Sbjct: 204 QISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKESPSCIEALDDQKVEF 256
Query: 167 ------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ +V + N + L P LVT G ++T++A G
Sbjct: 257 LACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNE----LRPRLVTGLVGNRVTQIACG 312
Query: 221 GRHTL 225
+HTL
Sbjct: 313 RQHTL 317
>gi|363749193|ref|XP_003644814.1| hypothetical protein Ecym_2251 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888447|gb|AET37997.1| Hypothetical protein Ecym_2251 [Eremothecium cymbalariae
DBVPG#7215]
Length = 483
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
Query: 21 VVYMWG----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
+VY WG Y G + L + R G D K + G + A S+ G+L WG
Sbjct: 239 IVYAWGNGQQYQLGRKIMERSRLRTLDPRAFGLDGVKYIASGE-NHSFALSDDGRLFAWG 297
Query: 77 SADDEGQSYLTS----GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ +++ G P LP V AAG H + + E G++YT+G
Sbjct: 298 -LNQFGQCGISTEVKDGAMVTVPTEVVLPENVRVKAVAAGEHHSLVLDENGDLYTFG 353
>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
Length = 531
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GNSANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
Length = 1017
Score = 42.4 bits (98), Expect = 0.19, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G ++A S+ G+L WGS + GQ + SG + P +P+ V+ A G +H V
Sbjct: 107 AGRSHSMAVSDDGRLFAWGS-NSHGQLAM-SGDILISDTPKRVPSLPETVQVACGASHTV 164
Query: 118 SVTEAGEVYTWG 129
S+ G V+ WG
Sbjct: 165 SLNGGGRVFIWG 176
>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
Length = 1043
Score = 42.4 bits (98), Expect = 0.19, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G ++A S+ G+L WGS + GQ + SG + P +P+ V+ A G +H V
Sbjct: 107 AGRSHSMAVSDDGRLFAWGS-NSHGQLAM-SGDILISDTPKRVPSLPETVQVACGASHTV 164
Query: 118 SVTEAGEVYTWG 129
S+ G V+ WG
Sbjct: 165 SLNGGGRVFIWG 176
>gi|302405721|ref|XP_003000697.1| regulator of chromosome condensation [Verticillium albo-atrum
VaMs.102]
gi|261360654|gb|EEY23082.1| regulator of chromosome condensation [Verticillium albo-atrum
VaMs.102]
Length = 554
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 25/131 (19%)
Query: 22 VYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
VY WG G + + IL P D+ GG +LA +E GKL+
Sbjct: 377 VYAWGLNNFAETGIREGAGEDDAVILRPTIVDSLEEHKIVDIAGGQH-HSLACTEDGKLL 435
Query: 74 TWG--------------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
TWG S DD + + + P P P VV+ AAG + ++
Sbjct: 436 TWGRFDGFQVGFAESAVSEDDLIRDESNNARILAVPTVVPSPE--GVVRVAAGTDNNFAI 493
Query: 120 TEAGEVYTWGW 130
T+ G+ Y+WG+
Sbjct: 494 TKDGKAYSWGF 504
>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
Length = 627
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 58 GGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWA 114
G G LA + G L +WG D G +++ K+ P+ P VVK AG+
Sbjct: 451 GSDGHTLALTVEGALFSWGDGDYGKLGHGNISTQKY---PKLIQGPLAGKVVKCICAGYR 507
Query: 115 HCVSVTEAGEVYTWG 129
H +VTE G++YTWG
Sbjct: 508 HSAAVTEDGQLYTWG 522
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 42.4 bits (98), Expect = 0.19, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 59 GCGFALATSESGKLITWGSADDE--GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G + +++G++ TWGS +D G+ + S P + VV+ A G AH
Sbjct: 102 GTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSAS-TSIPRMVRGLADHKVVQVACGSAHT 160
Query: 117 VSVTEAGEVYTWG 129
V +T G++YTWG
Sbjct: 161 VGLTATGQIYTWG 173
>gi|378732654|gb|EHY59113.1| hypothetical protein HMPREF1120_07112 [Exophiala dermatitidis
NIH/UT8656]
Length = 579
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Query: 58 GGCGFALATSESGKLITWGSAD---------DEGQSYLTSGKHGETPEPFPLPTEA---S 105
GG +A ++ G+L+ WG D D Q ++ G P +P +
Sbjct: 435 GGAHHTVAVTDKGELLVWGRLDGNQLGIKVSDLPQEHIVRDSAGH-PRILTVPAQIPNID 493
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGW 130
V AAAG HC+++ G+ Y WG+
Sbjct: 494 AVHAAAGSDHCIAIDRKGKAYAWGF 518
>gi|326932912|ref|XP_003212555.1| PREDICTED: regulator of chromosome condensation-like [Meleagris
gallopavo]
Length = 417
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
K P L +P + V GG + SE+GK+ T+G +DEG + + G
Sbjct: 56 RKKPALVQLPELMV------QVEAGGM-HTVCLSETGKIYTFG-CNDEGALGRDTSEEGS 107
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P P+ + VV+ +AG +H ++T+ G V+ WG
Sbjct: 108 ECTPGPVELQEKVVQVSAGDSHTAALTDDGRVFIWG 143
>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
Length = 963
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K++ CG +LA S+ G+L WG D GQ L G+ TPE + +V
Sbjct: 152 KNIIQITCGDYHSLALSKGGELFAWGQNLD-GQ--LGVGRIFASTSTPEIVENLSGVPLV 208
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP- 166
+ +AG AH ++++ +G VY+WG +C G ++ K+S AL ++
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKESPSCIEALDDQKVEF 261
Query: 167 ------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ +V + N + L P LVT G ++T++A G
Sbjct: 262 LACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNE----LRPRLVTGLVGNRVTQIACG 317
Query: 221 GRHTL 225
+HTL
Sbjct: 318 RQHTL 322
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 19 ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
E VY WG + S + +P P + G K + CG LA + +G++
Sbjct: 85 ELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA---CGDSHCLAVTMAGQVQ 141
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 142 SWGR-NQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGW 197
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 64/176 (36%), Gaps = 25/176 (14%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE +V A GW H ++V+++G
Sbjct: 185 AVTEDGDLYGWGWGR-YGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN 243
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D + R T +
Sbjct: 244 LYTYGWSK----------YGQLGH----GDFEDHLVPHKLEALKDSTISQISGGWRHTMA 289
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGK 230
E + G+ SP V KI++VA G RHTL LS K
Sbjct: 290 LTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSEK 345
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 17/131 (12%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ + S+SG L T+G + GQ + P ++++ + + GW H +
Sbjct: 230 CGWRHTITVSDSGNLYTYGWSK-YGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTM 288
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++T G++Y WGW + FG G D P + P D++ +
Sbjct: 289 ALTSEGKLYGWGWNK----------FGQVGVGNND----DHCSPVQVHFPEDQKISQVAC 334
Query: 178 KRRKTSSAREE 188
R T + E+
Sbjct: 335 GWRHTLALSEK 345
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + + + A GW H +
Sbjct: 282 GGWRHTMALTSEGKLYGWG-WNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTL 340
Query: 118 SVTEAGEVYTWG 129
+++E V++WG
Sbjct: 341 ALSEKKNVFSWG 352
>gi|452821071|gb|EME28106.1| ubiquitin-protein ligase E3 [Galdieria sulphuraria]
Length = 1119
Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAAG 112
CG F + ++SG L+TWG G +Y G+ P P VVK AAG
Sbjct: 108 ACGEDFVILATQSGTLVTWG-----GGAYGQLGRGAPMDWSGPHPVKNLQNKRVVKVAAG 162
Query: 113 WAHCVSVTEAGEVYTWG 129
H +++T+AG+VY+ G
Sbjct: 163 AFHWLALTDAGQVYSCG 179
>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
Length = 527
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Canis lupus familiaris]
Length = 531
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|256084922|ref|XP_002578674.1| regulator of chromosome condensation-related [Schistosoma mansoni]
gi|238664055|emb|CAZ34912.1| regulator of chromosome condensation-related [Schistosoma mansoni]
Length = 292
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 59 GCGFALATSESGKLIT--WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G GF L + SG++ + GS G LT E + T V + AAG H
Sbjct: 150 GLGFLLCLTFSGQVFSQGIGSRGQLGLGDLTDRTELTMIEALQILT---VTQIAAGNWHS 206
Query: 117 VSVTEAGEVYTWGWRE 132
V +T+ G+VYTWGW E
Sbjct: 207 VCLTDTGDVYTWGWNE 222
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 42.4 bits (98), Expect = 0.21, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 13/175 (7%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA S G L +WG+ +D + T + P ++ + + + G HC++
Sbjct: 92 GQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLA 151
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ + G+++TWG G F S+ Q E P + AG
Sbjct: 152 LGDDGQLFTWG-------QNTHGQLGLGNGFISQSS-PQKVKSLEGIPLAQVTAGGSHSF 203
Query: 179 RRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
S A + + DE +PC V K+ ++ G HT IL+
Sbjct: 204 ALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILT 258
Score = 38.1 bits (87), Expect = 3.7, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G++ +SP+K L IP + GG FAL S SG + WG + GQ
Sbjct: 174 GFISQSSPQKVKSLEGIPLA-------QVTAGGSHSFAL--SLSGAVFGWGK-NSAGQLG 223
Query: 86 LTSGKHGETP-EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
L + ETP PL T VV + G H +T+AG ++T+G
Sbjct: 224 LNDEQVKETPCHVKPLRTH-KVVYISCGEEHTAILTKAGGLFTFG 267
>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +ESGKL WG + EGQ L GK P P + A V + G+ H VT AG
Sbjct: 145 ALTESGKLFMWGD-NTEGQIGL--GKESHAPWPQEVSVGAPVSWVSCGYYHSALVTAAGA 201
Query: 125 VYTWGWRE 132
+YT+G R+
Sbjct: 202 LYTFGERD 209
>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
Length = 531
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|363742391|ref|XP_427366.3| PREDICTED: regulator of chromosome condensation [Gallus gallus]
Length = 417
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
SE+GK+ T+G +DEG + + G P P+ + VV+ +AG +H ++T+ G V+
Sbjct: 82 SETGKIYTFG-CNDEGALGRDTSEEGSECTPGPVELQERVVQVSAGDSHTAALTDDGRVF 140
Query: 127 TWG 129
WG
Sbjct: 141 IWG 143
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG + S + +P+P + G K + CG LA + G++ +WG
Sbjct: 89 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEGEVQSWG 145
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + P+ + AAG H +VTE G++Y WGW
Sbjct: 146 R-NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 198
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P +P + VV+ + GW H +
Sbjct: 283 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTL 341
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 342 AVTERNNVFAWG 353
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 74/195 (37%), Gaps = 29/195 (14%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
++P P R+ + G ++A + +WG +D GQ + +P
Sbjct: 10 VTPPPRRVL-------IISAGASHSVALLSGDIVCSWGRGED-GQLGHGDAEDRLSPTQL 61
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ +V G H V+ +E+ EVY+WGW DFG G +S+
Sbjct: 62 SALDDHQIVSVTCGADHTVAYSESRMEVYSWGWG----------DFGRLG--HGNSSDLF 109
Query: 158 SALPTE--------QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
+ LP + Q D ++ S R ++ GD +L P +
Sbjct: 110 TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF 169
Query: 210 PGVKITKVAAGGRHT 224
G++I VAAG HT
Sbjct: 170 EGIRIKMVAAGAEHT 184
>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
africana]
Length = 531
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 27/183 (14%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG------- 258
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
A ++ + TG ++ L + P E VV+ SA + SG+
Sbjct: 259 ---------ANTYGQLGTGNKNNLLS---PAHVLVEKERVVEIAACHSAHTSAAKTQSGN 306
Query: 197 EFF 199
+
Sbjct: 307 VYM 309
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSGNEALYVTDNDEVFVFGMNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSAPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|405976795|gb|EKC41279.1| Regulator of chromosome condensation [Crassostrea gigas]
Length = 443
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 67 SESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
++ GK+ WG+ D G+ LTS E P LP E +V+K A+G H + +TE GE+
Sbjct: 160 TDEGKVFAWGNFRDANGKIGLTSDGIQEKPIEM-LPGE-TVIKIASGGDHLLCLTEKGEI 217
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQK-DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
Y+ G E +V F G + D K + + + + ++V + S
Sbjct: 218 YSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKKRVVFDDVYAGQYMSY 277
Query: 185 AREESENPASG---DEFFTLS---------PCLV-TLNPGVKITKVAAGGRHTLILS 228
ARE+ + ++ L P V ++ VK+T V AG H + L
Sbjct: 278 AREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKAMSEDVKVTMVDAGQHHAICLD 334
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 93/231 (40%), Gaps = 55/231 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHNLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
AG S G+ + TE A P ++ ++ + + S S A+
Sbjct: 110 -------AG-----SDGQLGLMTTEDAVAVPRVIQKLNQQTI--LQVSCGNWHSLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
+FFT SP V G+ + +VAAGG H+ LS
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 41.2 bits (95), Expect = 0.43, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 69/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG + LA S+ G+L +WG+ D +T+ P + ++++ + G H
Sbjct: 90 ACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHS 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ + E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEEDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 15/121 (12%)
Query: 18 KETVVYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
K+ VY WG G TS ++ P L I A L G D CGG ++ A S +G
Sbjct: 532 KDYEVYSWGNGDGGRLGHGDTSTKEEPTL--IQA-LKGKDIIDVECGGT--YSAAISANG 586
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG--WAHCVSVTEAGEVYTW 128
L TWG + G+ + + TP ++ ++K A G +AH + +T G+VY+W
Sbjct: 587 ALYTWGRGN-YGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSW 645
Query: 129 G 129
G
Sbjct: 646 G 646
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A SE G + TWG + + T ++ PE + + VV + G +H ++
Sbjct: 681 GAQFSVALSEDGHVYTWGKGEGWKLGHPTE-ENVRFPEMVEVLRDRKVVGVSLGVSHVLA 739
Query: 119 VTEAGEVYTWGWRE 132
+T+ GEVY WG E
Sbjct: 740 LTDQGEVYGWGKNE 753
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE----ASVVK 108
K CG L + GK+ +WG D Y G+ G P E +V+
Sbjct: 623 KVACGSFYAHTLCITSQGKVYSWGDGD-----YGKLGRGGSDGSKLPRLIEKLQNVKIVQ 677
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
G V+++E G VYTWG
Sbjct: 678 VYCGAQFSVALSEDGHVYTWG 698
>gi|307167567|gb|EFN61117.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 634
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP---LPTEASVVK 108
+V CG F + ++ KL WG + +GQ S H + +P + +VK
Sbjct: 183 NVVHIACGTKFNMVITDKNKLYGWGK-NKQGQISTHSIIHSQEKYVYPRKIITFSDKIVK 241
Query: 109 AAAGWAHCVSVTEAGEVYTWGWREC 133
G H +++T G +Y WG +C
Sbjct: 242 LVCGDQHTLALTNKGNIYAWGNNDC 266
>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
Length = 594
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
K VCG LA S +G+++++G + GQ L G H + P + V+ A G
Sbjct: 270 KVVCGKN--HTLALSNNGEMVSFG-FNACGQ--LGVGSHLDQINPTKIEFSEKVLDIATG 324
Query: 113 WAHCVSVTEAGEVYTWGW 130
+ H + VT+ GE Y+WG+
Sbjct: 325 YYHSLCVTDNGEAYSWGY 342
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAG 112
G G LA + G++ +WG D Y G + + +P + + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
Length = 4191
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK-AAAGWAHC 116
G G LA +E+G + +WG D + H + PE P +K AG+ H
Sbjct: 439 GSDGHTLALAETGVVYSWGDGDYGKLGHGNCATHKQ-PERITGPFLGKTIKYIHAGYRHS 497
Query: 117 VSVTEAGEVYTWG 129
+VT+ G++YTWG
Sbjct: 498 AAVTDDGKLYTWG 510
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G G +LA +ESG++ +WG D + + + L TE VV+ A G+ H
Sbjct: 3419 GSDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTE-QVVQVACGFKHSA 3477
Query: 118 SVTEAGEVYTWG 129
VT G+++T+G
Sbjct: 3478 VVTSDGKLFTFG 3489
Score = 38.1 bits (87), Expect = 3.6, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP------T 102
G + + VC G F++A + +G++ TWGS G+ G LP
Sbjct: 587 GLTIQKVCAG-TWFSMALTTAGEVYTWGSGAILGK--------GSADAIVNLPMYVEDLA 637
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +V +AG HC+++T+ EV+ WG
Sbjct: 638 QYRIVDISAGDNHCLALTDEHEVFAWG 664
>gi|380029875|ref|XP_003698590.1| PREDICTED: uncharacterized protein LOC100869963 [Apis florea]
Length = 1858
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 54 DVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+V CG LA + +G + WGS+ GQ L TPE + ++ A A
Sbjct: 872 EVLSVSCGHCHTLAVTNNG-VYAWGSSQ-FGQLGLGKILQCSTPELITSLAQEVIIDAVA 929
Query: 112 GWAHCVSVTEAGEVYTWGW 130
G H V++T G V+TWGW
Sbjct: 930 GQYHSVALTSDGRVFTWGW 948
>gi|327289459|ref|XP_003229442.1| PREDICTED: regulator of chromosome condensation-like [Anolis
carolinensis]
Length = 420
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
G P K P L +P ++ ++ GG + +E+GK+ T+G +DEG
Sbjct: 43 LGLGPNVMARKRPALVQLPEKIIQAEA------GGV-HTVCLTETGKIYTFG-CNDEGAL 94
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + G P + + VV+ +AG +H ++TE G V+ WG
Sbjct: 95 GRDTSEEGSESTPGLVDLKEKVVQVSAGDSHTAALTEDGRVFIWG 139
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 65 ATSESGKLITWGSADDE-GQSYLTSGKHGE----TPEPFPLPTEASVVKAAAGWAHCVSV 119
A +E G++ WG+ DE G L + + GE +P P L + VVK A+G H V
Sbjct: 128 ALTEDGRVFIWGAFRDENGVIGLLAPQKGEENVGSPLPVELQLDVPVVKIASGSHHLALV 187
Query: 120 TEAGEVYTWG 129
+ AG +YT G
Sbjct: 188 SMAGNLYTCG 197
>gi|225439268|ref|XP_002265056.1| PREDICTED: uncharacterized protein LOC100261641 [Vitis vinifera]
Length = 1076
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 21/122 (17%)
Query: 22 VYMWGYLPGT---SPE------KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
VY WG+ G PE ++ +++P + G + +E G++
Sbjct: 208 VYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGEV 267
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGEVYT 127
TWGS + EGQ TS + P+P S +V AA H ++E+GEV+T
Sbjct: 268 FTWGS-NREGQLGYTS------VDTQPIPRRVSSLKSKIVAVAAANKHTAVISESGEVFT 320
Query: 128 WG 129
WG
Sbjct: 321 WG 322
>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
Length = 538
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L +++G L +WG G S L +G + P + T VVK A G H +++
Sbjct: 94 VLVCTDNGDLYSWGH---NGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLAL 150
Query: 120 TEAGEVYTWGWREC 133
T GEV+ WG+ C
Sbjct: 151 TLEGEVFAWGYNNC 164
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 34/159 (21%)
Query: 22 VYMWGYL------PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
V+ WGY GT+ ++ +P C G + V CG ++A ++G++
Sbjct: 156 VFAWGYNNCGQVGSGTTTNQA---TPRKVAACLGT--RKVTEIACGQTSSMALLDNGEVY 210
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
WG G L G + P P + + VV+ G+AH +++T+ G VY WG
Sbjct: 211 GWGY---NGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMALTDEGSVYAWG-- 265
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
A S+ + TG ++ L T DK
Sbjct: 266 --------------ANSYGQLGTGNKANLVTPTKIALDK 290
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 19 ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
E VY WG + S + +P P + G K + CG LA + +G++
Sbjct: 84 ELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA---CGDSHCLAVTMAGEVQ 140
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 141 SWGR-NQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGW 196
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 38/152 (25%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
TP+P + + A G +HC++VT AGEV +WG ++
Sbjct: 108 TPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWG---------------------RNQ 146
Query: 154 TGKQSALPTEQA-PPSDKRAGEEVVKR------RKTSSAREESE----------NPASGD 196
G+ TE + P +A E V + T++ E+ + N GD
Sbjct: 147 NGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGD 206
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
L P V+ G K+ VA G RHT+ +S
Sbjct: 207 RNDRLLPEKVSSVEGEKMVLVACGWRHTITVS 238
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 15/116 (12%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ + S+SG L T+G + GQ + P ++++ + + GW H +
Sbjct: 229 CGWRHTITVSDSGNLYTYGWSK-YGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTM 287
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD--STGKQSALPTEQAPPSDKR 171
++T G++Y WGW + FG G D S+ Q + P + P R
Sbjct: 288 ALTSEGKLYGWGWNK----------FGQVGVGNNDDHSSPGQVSFPGSENLPGCMR 333
>gi|76678806|ref|XP_586049.2| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Bos taurus]
Length = 425
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 56 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 114
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 115 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 165
>gi|449016322|dbj|BAM79724.1| similar to UVB-resistance protein UVR8 [Cyanidioschyzon merolae
strain 10D]
Length = 457
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 66/188 (35%), Gaps = 68/188 (36%)
Query: 60 CG--FALATSESGKLITWGSADD-------EGQSYL----------TSGKHGETPEPFPL 100
CG A S G+L +WG + E +S+L G+ G +
Sbjct: 137 CGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKVPGQPGNVRRSLAI 196
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P+E +V G+ H V+++ G VYT GW G+ G S + +L
Sbjct: 197 PSECQIVAVECGYHHSVALSAIGVVYTCGW-------------GAYGQLGHGSCNDEPSL 243
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ R+E N P ++I KVA+G
Sbjct: 244 --------------------LAVTFRDEHGNAL----------------PNLRIIKVASG 267
Query: 221 GRHTLILS 228
RHTL+L+
Sbjct: 268 DRHTLVLT 275
>gi|146295924|ref|YP_001179695.1| regulator of chromosome condensation, RCC1 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409500|gb|ABP66504.1| regulator of chromosome condensation, RCC1 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 730
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA +++G L WG +D GQ L +G + +P + T +V AAGW ++T+
Sbjct: 147 SLAVTKNGDLYAWG-LNDRGQ--LGNGTRVDCNKPIKIMT--NVKDVAAGWYTSFAITKN 201
Query: 123 GEVYTWGWREC 133
G++Y WG E
Sbjct: 202 GDLYGWGANEV 212
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
+ G LA +SG L WG+ + Y G + + P+ +VV AAG
Sbjct: 91 IAKAGWAHVLAIDQSGNLYCWGNNE-----YGQLGDGTKESKTTPVKILGNVVAIAAGNY 145
Query: 115 HCVSVTEAGEVYTWGWRE 132
H ++VT+ G++Y WG +
Sbjct: 146 HSLAVTKNGDLYAWGLND 163
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 16/71 (22%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHCVSVTE 121
LA +E+G+L W + G T E LPT+ V A AGWAH +++ +
Sbjct: 59 LAITENGELYEW--------------ELGGTLESRYLPTKVMEHVKIAKAGWAHVLAIDQ 104
Query: 122 AGEVYTWGWRE 132
+G +Y WG E
Sbjct: 105 SGNLYCWGNNE 115
>gi|340505960|gb|EGR32219.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 346
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 23/78 (29%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHG----------ETPE--PFPLPTEASVVKAAAG 112
+ +GKL T+G GKHG TP+ PF + V+ G
Sbjct: 8 VITTNGKLFTFGC-----------GKHGALGYKNYYFQHTPKEVPFFSDRKLKVIDVVTG 56
Query: 113 WAHCVSVTEAGEVYTWGW 130
+ H ++V E G++Y+WGW
Sbjct: 57 YNHTIAVVENGDIYSWGW 74
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
KDV CG + A +++G+L WGS + EGQ L K+ P L SV+ A
Sbjct: 139 KDVNIIACGGYHSAAITKNGELYIWGS-NSEGQLGL---KNDTISYPTMLDLGKSVISVA 194
Query: 111 AGWAHCVSVTEAGEVYTWGWRE 132
G+ H VT G++YT+G E
Sbjct: 195 CGYYHTAVVTADGKLYTFGETE 216
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF---ALATSESGKLITWGS 77
+Y+WG G K+ +S P L D K V CG+ A+ T++ GKL T+G
Sbjct: 160 LYIWGSNSEGQLGLKNDTIS-YPTML---DLGKSVISVACGYYHTAVVTAD-GKLYTFGE 214
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ H T VVK A G H V++T +G+VYT+G
Sbjct: 215 TEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTASGQVYTFG 266
>gi|403254345|ref|XP_003919932.1| PREDICTED: tryptophan 5-hydroxylase 1 [Saimiri boliviensis
boliviensis]
Length = 863
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 23/99 (23%)
Query: 43 PARLCGGDSWKDVCG-GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE----- 96
P+R+ G ++ K VC G + + +++G++ WGS KHG+
Sbjct: 630 PSRVTGLENSKAVCVIAGSDHSASLTDAGEVYVWGS-----------NKHGQLATEAAFL 678
Query: 97 PFPLPTEA------SVVKAAAGWAHCVSVTEAGEVYTWG 129
P P EA +V +GW H V+ TE G+V+TWG
Sbjct: 679 PVPQKIEAHCFQNENVTAVWSGWTHLVAQTETGKVFTWG 717
>gi|296189260|ref|XP_002742707.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Callithrix
jacchus]
Length = 547
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 165 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 223
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 224 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 274
>gi|219121886|ref|XP_002181288.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407274|gb|EEC47211.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 643
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALAT-SESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P+P C D + C G +L E+G++ ++G + GQ+ P P
Sbjct: 338 PLPILTCLRDLFISYCSLGFSHSLVVEKETGRVYSFGD-NARGQAD-PDNCASTIPLPTA 395
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAK 138
LP + +V AG H +V+E GE+ TWG + +C+P +
Sbjct: 396 LPLKEHIVAVFAGVFHSAAVSEDGELITWGCGRFGQCLPVVR 437
>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
Length = 1009
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K++ CG +LA S+ G+L WG D GQ L G+ TPE + +V
Sbjct: 122 KNIIQITCGDYHSLALSKGGELFAWGQNLD-GQ--LGVGRIFASTSTPEIVENLSGVPLV 178
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+ +AG AH ++++ +G VY+WG +C G ++ KDS
Sbjct: 179 QISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKDS 217
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 18 KETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
+E VY WG + S + +P P R G K + CG LA + G++
Sbjct: 91 EEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMA---CGDSHCLAVTMGGEV 147
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 148 QSWGR-NQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGW 204
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 62/176 (35%), Gaps = 25/176 (14%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE L +V A GW H ++V+ +G
Sbjct: 192 AVTEDGDLYGWGWGR-YGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGI 250
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + P + D + R T +
Sbjct: 251 LYTYGWSK----------YGQLGH----GDFEDHLFPHKVEALKDSSTSQISGGWRHTMA 296
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGK 230
+ + +GD SP V K+ +VA G RHTL + K
Sbjct: 297 LTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEK 352
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ +P P E V + A GW H +
Sbjct: 289 GGWRHTMALTSDGKLYGWG-WNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTL 347
Query: 118 SVTEAGEVYTWG 129
+ TE V+ WG
Sbjct: 348 AYTEKKNVFAWG 359
>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
caballus]
Length = 531
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|357520081|ref|XP_003630329.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524351|gb|AET04805.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 230
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGK-LITWG--SADDEGQSYLTSGKHGETPE 96
+P +L D +D+ CG + +A S+SGK + +WG + G+ L + K P+
Sbjct: 54 LPTKLSAFDG-QDIVSVTCGADYTVARSKSGKDVYSWGCWGRNQNGELGLGTTKDSHVPQ 112
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ AAG H V++TE G++Y WGW
Sbjct: 113 KILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGW 146
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 18/109 (16%)
Query: 28 LPGTSPEKSPILSPIPA-------RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
LP P SP L IP ++C G +LA S+ G++++WG D
Sbjct: 76 LPTKRPRMSPFLL-IPELQDYVIIQICCGSR----------HSLALSDWGQVLSWGDNDC 124
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ T + + P+ +VV+ A G H +++T GE+Y+WG
Sbjct: 125 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG 173
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 60/166 (36%), Gaps = 48/166 (28%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K TP +V+AA G HC++V +
Sbjct: 52 SLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQ 111
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G+ Y WG E +G G P K G +V++R
Sbjct: 112 GQAYAWGGNE----------YGQCGE-----------------EPERKEDGSKVLRRDIA 144
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
R P +++ +VAAGG H+++L+
Sbjct: 145 IPQR---------------------CAPQLRVRQVAAGGTHSVVLT 169
>gi|195168454|ref|XP_002025046.1| GL26838 [Drosophila persimilis]
gi|194108491|gb|EDW30534.1| GL26838 [Drosophila persimilis]
Length = 828
Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLT-SGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G F++A + G+L +WG A G + S + P +V A G AHC
Sbjct: 356 AGAQFSMALTTDGQLYSWGKASCLGHQLVERSAQWCSIPRLISGLQHKRIVDVAVGVAHC 415
Query: 117 VSVTEAGEVYTWG 129
++++ GEV+ WG
Sbjct: 416 LALSSCGEVFGWG 428
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P ++ D GC ++ A + SG L TWG +Y G +P P
Sbjct: 236 VPTKINSLDRCVKAVFCGCSYSAAITCSGNLYTWGRG-----TYARLGHGNSDDQPLPTV 290
Query: 102 ----TEASVVKAA--AGWAHCVSVTEAGEVYTWG 129
TE ++ A +G AH + +T G VY WG
Sbjct: 291 VMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWG 324
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 88/222 (39%), Gaps = 36/222 (16%)
Query: 22 VYMWGY-LPGTSPEKSPILSPIPARLCGGD-----SWKDVCGGGCGFALATSESGKLITW 75
+Y WGY G + + + S +P ++ G ++ V G +LA +GK W
Sbjct: 177 IYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDR-HSLAIGSNGKTYAW 235
Query: 76 GSADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
G A GQ L G TP P P S + +AG H ++V G+ Y WG
Sbjct: 236 GEARG-GQ--LGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWG---- 288
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP-----PSDKRAGEE---VVKRRKTSSA 185
D G G ++T S P +P + AG + + + A
Sbjct: 289 ------NNDSGQLG----NATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYA 338
Query: 186 REESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTL 225
+ N G+ T S P +VT GV T++ AGG H+L
Sbjct: 339 WGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLHSL 380
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 85/225 (37%), Gaps = 17/225 (7%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILS---PIPARLCGGDSWKDVCGGGCGFALATS 67
N + + +Y WGY + IL+ P+ G ++ V G +LA
Sbjct: 59 NHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAG-ADHSLAVG 117
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPF-----PLPTEASVVKAAAGWAHCVSVTEA 122
G WG D L +G + P +P+ ++ + AG H ++V
Sbjct: 118 SDGNAYAWGRNTD---GRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSN 174
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G++Y+WG+ S ++ A S K S G A T + R + K
Sbjct: 175 GDIYSWGYNR---SGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGK 231
Query: 182 TSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
T + G T +P LV+ GV T+V+AG H+L
Sbjct: 232 TYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSL 276
>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
Length = 531
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLDALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|118403980|ref|NP_001072233.1| uncharacterized protein LOC779680 [Xenopus (Silurana) tropicalis]
gi|110645409|gb|AAI18820.1| hypothetical protein MGC146459 [Xenopus (Silurana) tropicalis]
Length = 349
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 31/128 (24%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARL-----CGGDSWKDVCG----GGCGFALATSESGKL 72
++ WG + + +PIP C + +CG G +A S++G +
Sbjct: 168 IFQWGSGLASHARRFSPQNPIPPVYGATEPCPVPGMEGICGKVVTAGSYHCVALSDAGDM 227
Query: 73 ITWGSADDEGQSYLTSGKHGET--PEPFPLPTEA---------SVVKAAAGWAHCVSVTE 121
WGS KHG+ P+PF L S+V +GW H V+ T+
Sbjct: 228 YAWGS-----------NKHGQLLHPDPFLLHPHRVQAHFFLGESIVAVTSGWTHLVAQTD 276
Query: 122 AGEVYTWG 129
G+V+TWG
Sbjct: 277 TGKVFTWG 284
>gi|340507220|gb|EGR33218.1| hypothetical protein IMG5_058940 [Ichthyophthirius multifiliis]
Length = 660
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG LA +E+ ++ WG G Y G+ G P P T V G H V
Sbjct: 154 CGDYHTLALTENDQVYAWG-----GTLYKKVGQRGGKPGPIHQLTNKGVTYIDCGDFHSV 208
Query: 118 SVTEAGEVYTWG 129
++T G++YTWG
Sbjct: 209 AITNQGDIYTWG 220
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 60 CG--FALATSESGKLITWG---SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
CG ++A + G + TWG ++GQ L K E PE V+K + G
Sbjct: 202 CGDFHSVAITNQGDIYTWGGGGQFQNKGQLGLGHMKDIEIPEQIQFFKNKKVIKVSCGQF 261
Query: 115 HCVSVTEAGEVYTWG 129
H +++ + ++Y WG
Sbjct: 262 HTMALIDDNQLYGWG 276
>gi|294816129|ref|ZP_06774772.1| RCC1 repeat domain protein [Streptomyces clavuligerus ATCC 27064]
gi|326444464|ref|ZP_08219198.1| regulator of chromosome condensation-like protein [Streptomyces
clavuligerus ATCC 27064]
gi|294328728|gb|EFG10371.1| RCC1 repeat domain protein [Streptomyces clavuligerus ATCC 27064]
Length = 410
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T P K+P++ R+ KDV G GC F++A + G L +WG A +GQ L +
Sbjct: 176 TDPTKTPVVVQSLTRV------KDV-GAGCAFSVALGQDGTLWSWG-AGAKGQLGLGAAN 227
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P + + + A G H +++T G+V WG
Sbjct: 228 LTDHNTPQQVKGVSDIAAIAVGCEHVLALTSTGKVKAWG 266
>gi|116201941|ref|XP_001226782.1| hypothetical protein CHGG_08855 [Chaetomium globosum CBS 148.51]
gi|88177373|gb|EAQ84841.1| hypothetical protein CHGG_08855 [Chaetomium globosum CBS 148.51]
Length = 607
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---------PEPFPLPTEA-- 104
GG +LA ++ G+L+TWG D Q SG E+ P +PT
Sbjct: 472 VAGGEHHSLACTKDGELLTWGRIDGH-QVGQPSGSFSESNVIWDERNQPRILVVPTIVPD 530
Query: 105 --SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
VV AAG H ++T+ G+VY+WG+ + + T D
Sbjct: 531 IKDVVHVAAGTDHSFAITKEGKVYSWGFSSNYQTGQGTTD 570
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA S+ G++++WG D + T + + P+ +VV+ A G H ++
Sbjct: 98 GSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLA 157
Query: 119 VTEAGEVYTWG 129
+T GE+Y+WG
Sbjct: 158 LTSCGELYSWG 168
>gi|367030153|ref|XP_003664360.1| hypothetical protein MYCTH_2307107 [Myceliophthora thermophila ATCC
42464]
gi|347011630|gb|AEO59115.1| hypothetical protein MYCTH_2307107 [Myceliophthora thermophila ATCC
42464]
Length = 619
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 14/100 (14%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---------PEPFPLPTEA-- 104
GG +LA S++G+L+TWG D Q SG E P +PT
Sbjct: 485 IAGGEHHSLACSKNGELLTWGRIDGH-QVGQPSGSFSEDNTIWDERNKPRILVVPTVVPD 543
Query: 105 --SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
VV AAG H ++T G+VY+WG+ + + T D
Sbjct: 544 IKDVVHVAAGTDHSFAITADGKVYSWGFSANYQTGQGTTD 583
>gi|213409582|ref|XP_002175561.1| RCC1 domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212003608|gb|EEB09268.1| RCC1 domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 537
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 48/123 (39%), Gaps = 25/123 (20%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF--------PLPTEA----- 104
GG A+ T + G+++TWG DD LT + E EP P P E
Sbjct: 126 GGMHTAVVTHD-GRVLTWGVNDDFALGRLTKNQVDEDGEPIDNDTLEGTPYPVEGELLNK 184
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
VVK V++T+ GE Y WG C S G +T K S PT+
Sbjct: 185 HVVKVVCSDNLTVAITDEGECYAWGTFRC-----------SDGILGFSATQKHSPSPTKI 233
Query: 165 APP 167
P
Sbjct: 234 DIP 236
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS--ADDEGQSYLTSGKHGETPEPF 98
P+ L K VC +A ++ G+ WG+ D + + KH +P
Sbjct: 176 PVEGELLNKHVVKVVCSDN--LTVAITDEGECYAWGTFRCSDGILGFSATQKHSPSPTKI 233
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+P A V A G H +++T AG+VY WG
Sbjct: 234 DIPEVADV---AVGTDHVLALTTAGQVYAWG 261
>gi|67541629|ref|XP_664582.1| hypothetical protein AN6978.2 [Aspergillus nidulans FGSC A4]
gi|40742434|gb|EAA61624.1| hypothetical protein AN6978.2 [Aspergillus nidulans FGSC A4]
gi|259483716|tpe|CBF79334.1| TPA: RCC1 Chromatin-associated guanine nucleotide exchange factor
for Ran (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 533
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE--GQSYLTS 88
T+P+ P L I +CG + LA ++ G +++WGS G+ +
Sbjct: 275 TTPKLLPDLKKIKHLVCGDN-----------HVLALNDKGAVLSWGSGQQNQLGRRIIER 323
Query: 89 GK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
K +G P F LP +V AG H +V ++G+V+ WG
Sbjct: 324 NKLNGLQPREFGLPK--GIVHIGAGAFHSFAVHQSGKVFAWG 363
>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
Length = 531
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 44 ARLCGGDSWKDVCGG-GCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLP 101
AR+ ++ V G G F++ +GK+ TWG + GQ L G+ ET P P
Sbjct: 77 ARVTPLETITAVAGAVGLDFSVVVDSTGKVYTWGGGE-RGQ--LGLGREAMETGSRVPRP 133
Query: 102 TE----ASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ A V+ A G HC+++T G V++WG
Sbjct: 134 VKGLGNAFVISVACGTRHCLALTRDGRVFSWG 165
>gi|119486678|ref|XP_001262325.1| Ran exchange factor Prp20/Pim1, putative [Neosartorya fischeri NRRL
181]
gi|119410482|gb|EAW20428.1| Ran exchange factor Prp20/Pim1, putative [Neosartorya fischeri NRRL
181]
Length = 544
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 24/142 (16%)
Query: 22 VYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
VY WG G +++ I+ P G + +CGG +LA S+ G+ +
Sbjct: 370 VYAWGLNSFGETGIREGAGDDEAAIIHPTVVDSLSGKNIVQLCGG-AHHSLAVSKDGQCL 428
Query: 74 TWGSAD------------DEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWAHCVSVT 120
WG D D+ G+ EP P+P +A+VV AAG H +++
Sbjct: 429 VWGRLDGFQTGLKIDTLPDDAVVKDERGRPRILIEPTPVPGIKATVV--AAGSDHSIAID 486
Query: 121 EAGEVYTWGWRECVPSAKVTRD 142
G ++WG+ + + T+D
Sbjct: 487 VDGRAWSWGFSATYQTGQGTQD 508
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 69/188 (36%), Gaps = 41/188 (21%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+ A ++ G++ WG+ +H P P +P+ + A G H +++ E
Sbjct: 254 SFALTDDGQVYGWGTFRSNDGILGFDAEHKVQPTPTLIPSLKKIKHLACGDNHVLALDEK 313
Query: 123 GEVYTWG-------WRECVPSAKVT----RDFG--------SAGSFQK---DSTGKQSAL 160
G V++WG R + ++ R+FG S G+F D+TGK A
Sbjct: 314 GAVFSWGSGQQNQLGRRIIERNRLNGLQPREFGLPKNIVHVSCGAFHSFAVDATGKVYAW 373
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ R G A DE + P +V G I ++ G
Sbjct: 374 GLNSFGETGIREG-------------------AGDDEAAIIHPTVVDSLSGKNIVQLCGG 414
Query: 221 GRHTLILS 228
H+L +S
Sbjct: 415 AHHSLAVS 422
>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Papio anubis]
gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
protein 1 [Macaca fascicularis]
gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
Length = 531
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 13/136 (9%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCG--GDSWKDVCGGGC 60
G+ E + + E V+ Y GT +S + +P +L G G K + G
Sbjct: 28 GTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---VPKKLEGLSGKKIKSLSYGSG 84
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCV 117
L ++E G + WG G S L +G + P + T VV+ A G H +
Sbjct: 85 PHVLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSM 141
Query: 118 SVTEAGEVYTWGWREC 133
++ GEV+ WG+ C
Sbjct: 142 ALAADGEVFAWGYNNC 157
>gi|281211994|gb|EFA86155.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 537
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 59 GCGFALATSESGKLIT--WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G L +ESG++ + WGS G T+ ++ T PF V + +AG AH
Sbjct: 351 GATHTLFLAESGRVYSCGWGSEGRLGLGDNTTNRYVPTLIPFFHENGIRVTQVSAGGAHS 410
Query: 117 VSVTEAGEVYTWG 129
+ +T+ G+VYTWG
Sbjct: 411 MVLTDEGQVYTWG 423
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
E GKL++ GS +D GQ L G G TP +V AG+ H ++VT++G +
Sbjct: 181 EQGKLLSVGS-NDFGQLGLGEGMRGSSTPRVVEKLNNQELVSIGAGFDHSMAVTKSGHTF 239
Query: 127 TWGWR 131
WG+
Sbjct: 240 GWGYN 244
>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Otolemur garnettii]
Length = 531
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG + S + +P+P + G K + CG LA + G++ +WG
Sbjct: 89 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEGEVQSWG 145
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + P+ + AAG H +VTE G++Y WGW
Sbjct: 146 R-NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 198
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 283 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 341
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 342 AVTERNNVFAWG 353
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 74/185 (40%), Gaps = 34/185 (18%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 179
Query: 220 GGRHT 224
G HT
Sbjct: 180 GAEHT 184
>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
Length = 531
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V + G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + E E V+ Y GT +S + LCG K + G
Sbjct: 28 GTSANEALYVTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H V++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
leucogenys]
Length = 531
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
Length = 531
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|169610477|ref|XP_001798657.1| hypothetical protein SNOG_08337 [Phaeosphaeria nodorum SN15]
gi|160702077|gb|EAT84613.2| hypothetical protein SNOG_08337 [Phaeosphaeria nodorum SN15]
Length = 597
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 18/133 (13%)
Query: 26 GYLPGTSPEKSPILSP-IPARLCGGDSWKDVCGGGCGFALATSESGKLITWG-------- 76
GY + + +L+P I A L G + G +A ++ G+ + WG
Sbjct: 432 GYPANAGADDANVLTPRIVASLEGKQVQQ--VAAGSHHNIAITKDGQALVWGRCDGSQTG 489
Query: 77 -------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
S DDE + +GK EP PL ++V + G H + + + G+ Y+WG
Sbjct: 490 LPSETLASIDDEKRLMKNNGKPKILIEPTPLSDLKNIVAGSCGPDHSIVIDKDGKAYSWG 549
Query: 130 WRECVPSAKVTRD 142
+ +A+ T D
Sbjct: 550 FSANYQTAQGTDD 562
>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Homo sapiens]
Length = 531
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 1 [Bos taurus]
Length = 531
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|224118018|ref|XP_002331537.1| predicted protein [Populus trichocarpa]
gi|222873761|gb|EEF10892.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH--GETPEPFPLPTEASVVKAAAGW 113
CGG F + +E G++ WG+ + L G G P+P P +A +++ A G
Sbjct: 145 CGGF--FTMVLTEEGQIWNWGANSNY---ELGRGDKVGGWRPKPIPSLEDARIIQIAGGG 199
Query: 114 AHCVSVTEAGEVYTWGW 130
HC+++T+ G+V +WG+
Sbjct: 200 YHCLALTDEGKVLSWGF 216
>gi|147822080|emb|CAN63618.1| hypothetical protein VITISV_038963 [Vitis vinifera]
Length = 653
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 21/122 (17%)
Query: 22 VYMWGYLPGT---SPE------KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
VY WG+ G PE ++ +++P + G + +E G++
Sbjct: 208 VYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGEV 267
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGEVYT 127
TWGS + EGQ TS + P+P S +V AA H ++E+GEV+T
Sbjct: 268 FTWGS-NREGQLGYTS------VDTQPIPRRVSSLKSKIVAVAAANKHTAVISESGEVFT 320
Query: 128 WG 129
WG
Sbjct: 321 WG 322
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG + S + +P+P + G K + CG LA + G++ +WG
Sbjct: 89 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEGEVQSWG 145
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + P+ + AAG H +VTE G++Y WGW
Sbjct: 146 R-NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 198
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 283 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 341
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 342 AVTERNNVFAWG 353
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 74/185 (40%), Gaps = 34/185 (18%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 179
Query: 220 GGRHT 224
G HT
Sbjct: 180 GAEHT 184
>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
troglodytes]
gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Chronic lymphocytic leukemia deletion region gene 7
protein; Short=CLL deletion region gene 7 protein;
AltName: Full=Regulator of chromosome condensation and
BTB domain-containing protein 1
gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [synthetic construct]
gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 531
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|321471075|gb|EFX82049.1| hypothetical protein DAPPUDRAFT_210805 [Daphnia pulex]
Length = 510
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P R+ G V CG ++A + G L WG G L G + P
Sbjct: 148 VPRRVTSGIGGHKVVAIACGQLTSMALLDDGDLYGWGY---NGNGELGIGNNNNQHNPVR 204
Query: 100 LPT--EASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + + + G+AHC+++T+ GE+Y WG
Sbjct: 205 VSNLHKVFITQIVCGFAHCLALTDQGELYAWG 236
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP---TEASVVKAAAGWAHCVSVT 120
LA S+SG+L TWG S L +G T P + +V++ G HC+++T
Sbjct: 66 LAFSDSGELYTWGY---NTYSQLGNGNTNHTLTPSLVSGVLAGKTVIQVGCGNHHCLALT 122
Query: 121 EAGEVYTWG 129
GEV+ WG
Sbjct: 123 SEGEVFAWG 131
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 42.0 bits (97), Expect = 0.27, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA S+ G++++WG D + T + + P+ +VV+ A G H ++
Sbjct: 98 GSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157
Query: 119 VTEAGEVYTWG 129
+T GE+Y+WG
Sbjct: 158 LTSCGELYSWG 168
>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
Length = 1348
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 47 CGGDSWKDVCGGGCGFALA--TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
CGGD + GGG G LA SG T +AD + + G+
Sbjct: 447 CGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDE---------- 496
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
V + +AG H V+VTE G VYTWG R ++ + G AG+
Sbjct: 497 KVFQISAGSKHSVAVTEGGCVYTWGART---QGQLGHELGDAGT 537
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG + S + +P+P + G K + CG LA + G++ +WG
Sbjct: 78 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEGEVQSWG 134
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + P+ + AAG H +VTE G++Y WGW
Sbjct: 135 R-NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 187
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 272 GGFRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 330
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 331 AVTERNNVFAWG 342
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 35/172 (20%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTE 121
SG ++ +WG +D GQ HG+ E P PT+ S +V G H V+ ++
Sbjct: 21 SGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQ 73
Query: 122 AG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE--------QAPPSDKRA 172
+G EVY+WGW DFG G +S+ + LP + Q D
Sbjct: 74 SGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHGIRIKQIACGDSHC 121
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
++ S R ++ GD +L P + G++I VAAG HT
Sbjct: 122 LAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHT 173
>gi|350402535|ref|XP_003486520.1| PREDICTED: hypothetical protein LOC100745121 [Bombus impatiens]
Length = 1865
Score = 42.0 bits (97), Expect = 0.28, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 54 DVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+V CG LA + +G + WGS+ GQ L TPE + ++ A A
Sbjct: 872 EVLSVSCGHCHTLAVTNNG-VYAWGSSQ-FGQLGLGKVLQCSTPELITSLAQEVIIDAVA 929
Query: 112 GWAHCVSVTEAGEVYTWGW 130
G H V++T G V+TWGW
Sbjct: 930 GQYHSVALTADGRVFTWGW 948
>gi|302855135|ref|XP_002959067.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
gi|300255564|gb|EFJ39861.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
Length = 942
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Query: 12 EKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGK 71
+ ++ +V+ WG G + P+ +P P + + G LA + G+
Sbjct: 410 HSLALLEDGMVWQWGENWGDFSMR-PVRTPRPVAVHPDEGGVAAVSCGAFHNLALTAQGR 468
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK--AAAGWAHCVSVTEAGEVYTWG 129
+++WG +D GQ S + TP P L E VV AA GW C +++ AGEV+ WG
Sbjct: 469 VLSWG-MNDYGQLGNGSTTYATTPRPV-LDMEGVVVADIAAGGWHSC-ALSSAGEVWVWG 525
>gi|322699843|gb|EFY91602.1| Ran exchange factor Prp20/Pim1, putative [Metarhizium acridum CQMa
102]
Length = 539
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 56 CGGGCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPE----PFPLPTEASVVKAA 110
G C F L +++G + WGS D++G T ++G+ E P +P +V++ A
Sbjct: 230 AGDSCSFVL--TQTGTVYGWGSFRDNKGDRRFTKSQNGKVVEIQKDPILIPELENVIQIA 287
Query: 111 AGWAHCVSVTEAGEVYTWGWRE 132
G H +++ ++G+V+ WG E
Sbjct: 288 CGANHALALDKSGQVWGWGSYE 309
>gi|307185823|gb|EFN71674.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 1117
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K+V CG F + ++ KL WGS S + S K P ++ + K
Sbjct: 155 KNVVHIACGEKFNMVITDENKLYVWGSNKYGQISTIQSQKQYVYPCEITTFSD-KIDKVV 213
Query: 111 AGWAHCVSVTEAGEVYTWGWREC 133
G+AH +++T GE+Y WG C
Sbjct: 214 CGYAHTLALTNKGEIYAWGGNSC 236
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG + S + +P+P + G K + CG LA + G++ +WG
Sbjct: 80 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTXEGEVQSWG 136
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + P+ + AAG H +VTE G++Y WGW
Sbjct: 137 R-NQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGW 189
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 274 GGARHTXALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 332
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 333 AVTERNNVFAWG 344
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 71/172 (41%), Gaps = 35/172 (20%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTE 121
SG ++ +WG +D GQ HG+ E P PT+ S +V G H V+ ++
Sbjct: 23 SGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQ 75
Query: 122 AG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE--------QAPPSDKRA 172
+G EVY+WGW DFG G +S+ + LP + Q D
Sbjct: 76 SGXEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHGIRIKQIACGDSHC 123
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
+ S R ++ GD +L P + G++I VAAG HT
Sbjct: 124 LAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHT 175
>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
Length = 453
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE-----TPEPFPLPTEASVVKAAAG 112
CGF AL GKL+T G G L SG G+ T F E VVK +AG
Sbjct: 326 CGFSHALIIDNDGKLLTLGW---NGNGQLGSGVKGDNHLVPTKLEFDFDGEK-VVKVSAG 381
Query: 113 WAHCVSVTEAGEVYTWG 129
H +TE+G++Y WG
Sbjct: 382 RNHSACITESGKLYIWG 398
>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60474380|gb|EAL72317.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2044
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Query: 22 VYMWGYLPGTSPEKSPIL-------SPIPARLCGGDSWKDVCGGGCGF--ALATSESGKL 72
VY+WG +P PIL +P +L +S DV GF A +G+L
Sbjct: 770 VYLWGRGAVKTP-AVPILGIPQIEDQLLPFKL---ESLSDVVSVSIGFCHGAAVRANGEL 825
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGW 130
+TWG ++ GQ L G EP + + S + + G H + +T+ G+VY+WG
Sbjct: 826 LTWGVGEN-GQ--LGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGA 882
Query: 131 RE 132
E
Sbjct: 883 SE 884
>gi|159037340|ref|YP_001536593.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916175|gb|ABV97602.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 563
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 75/198 (37%), Gaps = 23/198 (11%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L + + G G +LA + + ++ WG + GQ + + TP
Sbjct: 83 TPVTVDLPADTTITAIAAGVNGHSLAVTSASTMLAWG-FNTWGQLGDGTTTNRNTPVAVD 141
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LPT ++ AAG +H ++VT AG + WG SAG +T ++
Sbjct: 142 LPTGTTITAIAAGKSHSLAVTSAGTMLAWG-------------LNSAGQLGDGTTTNRNT 188
Query: 160 -----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNP 210
LPT + + + EN G +P V L
Sbjct: 189 PVAVDLPTGTTITAIAAGNGHSLALTSAGTMLAWGENTWGQLGDGTTTNRNTPVTVDLPT 248
Query: 211 GVKITKVAAGGRHTLILS 228
G IT +A GG H+L ++
Sbjct: 249 GTTITALAGGGGHSLAVT 266
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 25 WGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ 83
WG L GT+ ++ +P+ L G + + G +LA + +G ++ WG + GQ
Sbjct: 123 WGQLGDGTTTNRN---TPVAVDLPTGTTITAIAAGKS-HSLAVTSAGTMLAWG-LNSAGQ 177
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + TP LPT ++ AAG H +++T AG + WG
Sbjct: 178 LGDGTTTNRNTPVAVDLPTGTTITAIAAGNGHSLALTSAGTMLAWG 223
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L G + + G G +LA + +G ++ WG + GQ + + TP
Sbjct: 188 TPVAVDLPTGTTITAIAAGN-GHSLALTSAGTMLAWGE-NTWGQLGDGTTTNRNTPVTVD 245
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
LPT ++ A G H ++VT G + WG+
Sbjct: 246 LPTGTTITALAGGGGHSLAVTSTGTMLAWGFN 277
>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
Length = 710
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGET--PEPFPLPTEASVVKAAAGWAHCVSV 119
++LA + +G ++ WG+ +D+GQ L +G + ++ P P LP ++ AA H +++
Sbjct: 167 YSLALTATGTVLAWGN-NDQGQ--LGNGTNTDSYLPVPLALPAATTITAIAAATNHGLAL 223
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T G V WG + + G+ G+ +T ALP + AG +
Sbjct: 224 TSNGTVLAWG-------SNGSGQLGN-GNTTNSNTPVTVALPAGTTITAIAAAGSHSMAL 275
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
T + ++ T+ P + G+ IT VA+G H+L L+
Sbjct: 276 TSTGTVLTWGQD--------TVLPIPIVFPAGITITAVASGNDHSLALT 316
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 79/213 (37%), Gaps = 46/213 (21%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS-----------ADDEGQ--SY 85
LSP+ L G + DV G +LA + +G ++ WG+ D+ Q SY
Sbjct: 87 LSPVRVHLPTGTTISDVAAGAV-HSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSY 145
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
+ + H LP +V AA + +++T G V WG D G
Sbjct: 146 VPAAVH--------LPAGTTVTSVAASSTYSLALTATGTVLAWG----------NNDQGQ 187
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK----TSS------AREESENPASG 195
G + T S LP A P+ TS+ S +G
Sbjct: 188 LG----NGTNTDSYLPVPLALPAATTITAIAAATNHGLALTSNGTVLAWGSNGSGQLGNG 243
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + +P V L G IT +AA G H++ L+
Sbjct: 244 NTTNSNTPVTVALPAGTTITAIAAAGSHSMALT 276
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-----ETP 95
PIP G + V G +LA + +GK+ TWG+ +Y S +G P
Sbjct: 291 PIPIVFPAGITITAVASGN-DHSLALTSTGKVFTWGA------NYFGSLGNGTFANSSVP 343
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P +PT+ ++ A G A +++T G++ WG
Sbjct: 344 VPASVPTDTTITAIAGGNAQSLALTSTGKLLAWG 377
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 28/131 (21%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L G + + G ++A + +G ++TWG + P P
Sbjct: 250 TPVTVALPAGTTITAIAAAGS-HSMALTSTGTVLTWG-------------QDTVLPIPIV 295
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
P ++ A+G H +++T G+V+TWG FGS G + T S+
Sbjct: 296 FPAGITITAVASGNDHSLALTSTGKVFTWGANY----------FGSLG----NGTFANSS 341
Query: 160 LPTEQAPPSDK 170
+P + P+D
Sbjct: 342 VPVPASVPTDT 352
>gi|384248125|gb|EIE21610.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 609
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 90/255 (35%), Gaps = 54/255 (21%)
Query: 22 VYMWG----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF-ALATSESGKLITWG 76
VY WG Y GT E L P RL V F + A ++ G L TWG
Sbjct: 122 VYSWGNGANYQLGTEAEG---LQLTPNRLDSLHGTPIVALAAAKFHSAAVAKDGSLYTWG 178
Query: 77 SADD----EGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ ++ SG+ P LP +V A G H V+VT AGE++TWG
Sbjct: 179 FGRGGRLGHPEFHIHSGESAVILPRLVALPGRRTVAAVATGKHHTVAVTRAGELFTWG-- 236
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
RD G G DS PT + S ++ V + + E
Sbjct: 237 -------SNRD-GRLGYTAVDSQ------PTPRRVTSMRQRVMAVAAANRHTVVLAEGGT 282
Query: 192 PAS-------------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSLESAEPK 238
S D P +V G IT VAA RHT++L+
Sbjct: 283 VYSWGSNLQGQLGYGTSDSASNAVPRIVEAMVGKTITAVAAAKRHTVVLT---------- 332
Query: 239 RLIFSGISSWSHYIV 253
+ + +W H +V
Sbjct: 333 --VEGDVYTWGHRVV 345
>gi|196007790|ref|XP_002113761.1| hypothetical protein TRIADDRAFT_57518 [Trichoplax adhaerens]
gi|190584165|gb|EDV24235.1| hypothetical protein TRIADDRAFT_57518 [Trichoplax adhaerens]
Length = 507
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 13/80 (16%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-----ETPEPFPLPTEASVVKA 109
+CG F LA + SG L +WG G Y +HG E P+ + + V+
Sbjct: 385 ICGSA--FTLALTTSGSLYSWG----HGSHY--HSQHGIVGSVERPKIVDVLKDKRVIAI 436
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
AAG H ++ T GE+Y WG
Sbjct: 437 AAGSLHWLACTIYGEIYAWG 456
>gi|357166571|ref|XP_003580754.1| PREDICTED: protein RCC2-like [Brachypodium distachyon]
Length = 547
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 55 VCGGGCGFALATSESGKLITWG---------SADDEGQSYLTSGKHGETPEPFP----LP 101
VCGG L++ E ++T G D+E + +S K P+P P +
Sbjct: 179 VCGGDFTVWLSSVEGSSILTAGLPQYGQLGHGTDNEYNTKDSSVKLSYDPQPRPRAIAVL 238
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+E ++VK A G H V+V +G VYTWG+
Sbjct: 239 SEKTIVKVACGTNHTVAVDSSGFVYTWGF 267
>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
Length = 391
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K TP +V+AA G HC++V E
Sbjct: 50 SLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEE 109
Query: 123 GEVYTWG---WRECV--PSAKVTRDFGSAGSFQKDSTGKQSALP 161
G Y WG + +C K ++ G + +D T Q P
Sbjct: 110 GRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAP 153
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA S+ G++++WG D + T + + P+ +VV+ A G H ++
Sbjct: 98 GSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157
Query: 119 VTEAGEVYTWG 129
+T GE+Y+WG
Sbjct: 158 LTSCGELYSWG 168
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG + + S +L P P + G + + CG LA + ++++WG
Sbjct: 88 VYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIA---CGDSHCLAVTMDSQVLSWG 144
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ G+ L + + P+ + E + AAG H V++T+ G +Y WGW
Sbjct: 145 R-NQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGW 197
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG ++A + SG+L+ WG + GQ + + +P P + V + GW H +
Sbjct: 281 GGWRHSMALTSSGQLLGWG-WNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTI 339
Query: 118 SVTEAGEVYTWG 129
+VTE VY+WG
Sbjct: 340 AVTERENVYSWG 351
>gi|348529242|ref|XP_003452123.1| PREDICTED: regulator of chromosome condensation-like [Oreochromis
niloticus]
Length = 418
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
K P L +P ++ V GG + SE+G + T+G +DEG + + G
Sbjct: 60 KKPALLSLPEKIV------QVTAGGM-HTVCLSETGNIYTFG-CNDEGALGRDTSEEGSE 111
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + VV+ +AG +H ++TE G VY WG
Sbjct: 112 MIPGKVTLNEKVVQVSAGDSHTAALTEDGSVYIWG 146
>gi|342181806|emb|CCC91285.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 237
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 24 MWGYLPGTSPEKSPILSP----IPARLCGGD----SWKDV---CGGGCGFALATSESGKL 72
+WG L P+ P+++ +P L D +W D+ GG GF A S G++
Sbjct: 98 LWGELGIPDPQTMPVITVTEQGVPISLSQIDLRQFNWNDMIVDVKGGHGFFAALSHKGEV 157
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ WG A++ Q G T T +V+ G +++TE G+VY WG+
Sbjct: 158 LLWG-ANNYAQCTPQVGSPSCTTPHKRFVTREKIVQVECGNYTVLALTETGDVYGWGY 214
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 46 LCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE 103
L G + + G CG A LA +E G++ WG+ D T+ + P E
Sbjct: 77 LVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCE 136
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + G HC+++++ G+++ WG
Sbjct: 137 HRISQVMCGNHHCIALSKDGQLFVWG 162
>gi|390337940|ref|XP_791025.3| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog isoform 2 [Strongylocentrotus purpuratus]
gi|390337942|ref|XP_003724679.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog isoform 1 [Strongylocentrotus purpuratus]
Length = 509
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA S+ G+L WG+++ +T TP P + AA G C E+G
Sbjct: 341 LAISDKGELFGWGNSEYNQLKCVTEDTQVYTPTHLPFKGIGKITSAATGGTICALTNESG 400
Query: 124 EVYTWGW 130
EV+ WG+
Sbjct: 401 EVWVWGY 407
>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
Length = 394
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K TP +V+AA G HC++V E
Sbjct: 50 SLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEE 109
Query: 123 GEVYTWG---WRECV--PSAKVTRDFGSAGSFQKDSTGKQSALP 161
G Y WG + +C K ++ G + +D T Q P
Sbjct: 110 GRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAP 153
>gi|293356015|ref|XP_218819.5| PREDICTED: RCC1 domain-containing protein 1-like [Rattus
norvegicus]
Length = 378
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 44/182 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL E+G++ +WG G+HG+ E P EA + +
Sbjct: 169 GAEHALLLCEAGQVFSWGG-----------GRHGQLGHGSLEAELEPRLLEALQGLRMAE 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G++Y WGW E A TR + ++++T
Sbjct: 218 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELN----------D 267
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLI 226
D GEE +A + PA F + P L+ L G K + G RHT +
Sbjct: 268 DGLRGEE--------AALADVGAPA---HFIAIQPFPALLDLPLGSDAVKASCGSRHTAV 316
Query: 227 LS 228
++
Sbjct: 317 VT 318
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 290 QPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGW 328
>gi|357601928|gb|EHJ63196.1| hypothetical protein KGM_14591 [Danaus plexippus]
Length = 375
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 55 VCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA------SV 106
VC CG+ + ++ G++ TWG+ L G HG+ LPTE +
Sbjct: 187 VCDIVCGYEHYMLLTDEGRVYTWGNG-----RRLQLG-HGDLTN-LELPTEVEALAGIKI 239
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRE 132
VK AG H +++++ G++Y WGW +
Sbjct: 240 VKIRAGGWHSLALSDCGDLYLWGWND 265
>gi|328712488|ref|XP_001950480.2| PREDICTED: regulator of chromosome condensation-like [Acyrthosiphon
pisum]
Length = 543
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTE--ASVVKAAA 111
+ G L +E GKL++WG D+ TS + ET P +P E A + +A
Sbjct: 206 LIAAGSMHVLGVTEDGKLMSWGCNDEGALGRDTSVEDSETRPGIVQIPEEEGAEIYSISA 265
Query: 112 GWAHCVSVTEAGEVYTWG 129
G +H + G VY+WG
Sbjct: 266 GGSHSAILLSNGNVYSWG 283
>gi|346972722|gb|EGY16174.1| RCC1 domain-containing protein [Verticillium dahliae VdLs.17]
Length = 665
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 25/131 (19%)
Query: 22 VYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
VY WG G + + IL P D+ GG +LA +E GKL+
Sbjct: 488 VYAWGLNNFAETGIREGAGEDDAVILRPTIVDSLEEHKIVDIAGGQH-HSLACTEDGKLL 546
Query: 74 TWG--------------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
TWG S DD + + + P P P VV+ AAG + ++
Sbjct: 547 TWGRFDGFQVGFAESAVSEDDLIRDESNNARILAVPTVVPSPE--GVVRVAAGTDNNFAI 604
Query: 120 TEAGEVYTWGW 130
T+ G+ Y+WG+
Sbjct: 605 TKDGKAYSWGF 615
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 53 KDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
++VC G +LA E GKL TWG + K P A +V+AA
Sbjct: 39 QNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAA 98
Query: 111 AGWAHCVSVTEAGEVYTWGWRE 132
G HC++V + G Y WG E
Sbjct: 99 IGGWHCLAVDDQGRAYAWGGNE 120
>gi|398337161|ref|ZP_10521866.1| RCC1 domain-containing protein [Leptospira kmetyi serovar Malaysia
str. Bejo-Iso9]
Length = 507
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 50/137 (36%), Gaps = 22/137 (16%)
Query: 10 ENEKMEECKETVVYMWGYL-------------PGTSPEKSPILSPIPARLCGGDSWKDVC 56
+N M K VY WG P ++ P L PI G D
Sbjct: 188 QNSSMAIAKNGKVYTWGTNANGQLGIGNNTTDPASASTAGPRLPPIEVPGIG-----DAV 242
Query: 57 GGGCGF--ALATSESGKLITWG--SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
G GF AL +G L+ +G S G + P + V++ AG
Sbjct: 243 MGAYGFDHALVLKSNGTLVAFGLNSVGQLGNGATGLTTTTISTTPVAVVGLTDVIQVIAG 302
Query: 113 WAHCVSVTEAGEVYTWG 129
AH ++T +GEVY WG
Sbjct: 303 SAHSAALTSSGEVYVWG 319
>gi|383861352|ref|XP_003706150.1| PREDICTED: uncharacterized protein LOC100881287 [Megachile
rotundata]
Length = 1884
Score = 41.6 bits (96), Expect = 0.32, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 54 DVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+V CG LA + +G + WGS+ GQ L TPE + ++ A A
Sbjct: 874 EVLSVSCGHCHTLAVTNNG-VYAWGSSR-FGQLGLGKILQCSTPELITYLAQEVIIDAVA 931
Query: 112 GWAHCVSVTEAGEVYTWGW 130
G H V++T G V+TWGW
Sbjct: 932 GQYHSVALTADGRVFTWGW 950
>gi|403347572|gb|EJY73213.1| hypothetical protein OXYTRI_05658 [Oxytricha trifallax]
Length = 600
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
GCG+ + K+++WG + GQ H E P T+ +V + G+ HC+
Sbjct: 301 GCGYISVIDNTHKVMSWGD-NYAGQLGTGDDIHREDPTLINSLTDEKIVDMSLGFQHCLY 359
Query: 119 VTEAGEVYTWG 129
+ + GEV+ G
Sbjct: 360 LNDKGEVFGIG 370
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 96/235 (40%), Gaps = 42/235 (17%)
Query: 10 ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC---GGDSWKDVCG--GGCGFAL 64
EN + K+ ++ WG E + + I +LC S KDV GC +L
Sbjct: 306 ENHSLALKKDGTIWAWG-----DNEWGQLGNSISEKLCVPVQFKSLKDVVAIAAGCEHSL 360
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A + G + +WG+ + GQ L +G ++ P + VV A G AH +++ + G
Sbjct: 361 ALKKDGTVWSWGN-NYYGQ--LGNGNSIDSYVPVQVRGLKDVVAIATGNAHSLALKKDGT 417
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---RAGEE---VVK 178
V+ WG +FG G + T K S +P + D AG + K
Sbjct: 418 VWAWG----------NNEFGQLG----NGTNKSSFVPVQVKGLKDVVAIAAGSDHSLAFK 463
Query: 179 RRKTSSAREESE-----NPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLIL 227
+ T A +E N + G + P V G+K + VAAG H+L L
Sbjct: 464 KDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQV---KGLKDVVAVAAGSVHSLAL 515
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 18 KETVVYMWGYLPGTSPE---KSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
K+ V+MW Y + + SP+P ++ G KDV G +LA + G +
Sbjct: 212 KDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEG---LKDVVAIAAGRYHSLALKKDGTV 268
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WG+ + GQ L +GK ++ +P + VV AAG H +++ + G ++ WG
Sbjct: 269 WAWGN-NYYGQ--LGNGKSEDSYDPVQVKNLKDVVAIAAGENHSLALKKDGTIWAWG 322
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 41.6 bits (96), Expect = 0.33, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 43 PARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPF 98
P ++ G D + K CGG LA +E G+L WGS D GQ G +G T P P
Sbjct: 75 PEKVEGLDFYRITKISCGGN--HTLAFNEWGQLFGWGS-DSHGQL----GFNGTTQPLPK 127
Query: 99 PLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
+ + A+ +V+ + G H +++T GE+Y+WG
Sbjct: 128 IIKSLATFHIVQISCGKNHSLALTNNGELYSWG 160
>gi|145334779|ref|NP_001078735.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|8978337|dbj|BAA98190.1| regulator of chromosome condensation (cell cycle regulatory
protein) like [Arabidopsis thaliana]
gi|332008270|gb|AED95653.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 454
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 15/164 (9%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A + G L WG + GQ L +G P VVK + GW H +++T G
Sbjct: 151 AIGDDGSLWVWGRSK-RGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDG 209
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
+V+ WG+ V +V G+ G + S + + + E +++
Sbjct: 210 KVFGWGY---VADGRV----GNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVE 262
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ +E++ P PCLV K+ +A G H+LIL
Sbjct: 263 AMSKENDMP------IAWEPCLVEETCNEKVADIACGSDHSLIL 300
>gi|393215520|gb|EJD01011.1| RCC1/BLIP-II [Fomitiporia mediterranea MF3/22]
Length = 420
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 65 ATSESGKLITWGSAD-DEGQSYLTSG-KHGETPEP-FPLPTEASVVKAAAGWAHCVSVTE 121
A S+ G+L WGS +EG +SG K P P LP + V AAG H V +T
Sbjct: 115 AISDQGELRVWGSFRANEGSLGFSSGLKLQHLPTPILNLPKDEKVASVAAGDNHLVVLTT 174
Query: 122 AGEVYTWG 129
G +YTWG
Sbjct: 175 YGNIYTWG 182
>gi|297583255|ref|YP_003699035.1| Ig domain-containing protein group 2 domain-containing protein
[Bacillus selenitireducens MLS10]
gi|297141712|gb|ADH98469.1| Ig domain protein group 2 domain protein [Bacillus selenitireducens
MLS10]
Length = 790
Score = 41.6 bits (96), Expect = 0.33, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G F+LA SG + +WGS + + G TPE E +V+ +AG+ H +
Sbjct: 142 AGSDFSLALDGSGNVWSWGSNAFGKGGHGSVGGTIATPERITDLEEPRIVQVSAGFEHAM 201
Query: 118 SVTEAGEVYTWG 129
++ + G VY+WG
Sbjct: 202 ALDDEGNVYSWG 213
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE 93
S +L P P G K + CG LA + G++ +WG + GQ L + +
Sbjct: 104 SDLLIPQPIIALQGLRIKQIA---CGDSHCLAVTMEGEVQSWGR-NQNGQLGLGTSEDSL 159
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
P+ + AAG H V++TE GE+Y WGW
Sbjct: 160 VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGW 196
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG ++A + +G L WG + GQ + +P P + VV+ + GW H +
Sbjct: 281 GGWRHSMALTSTGLLYGWG-WNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTI 339
Query: 118 SVTEAGEVYTWG 129
+VTE V++WG
Sbjct: 340 AVTEKENVFSWG 351
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 75/208 (36%), Gaps = 34/208 (16%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G ++A +E+G+L WG G L
Sbjct: 161 PQKIQTFQGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 210
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE +V A GW H +SV+ G +YT+GW + +G G
Sbjct: 211 WIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSK----------YGQLGH---- 256
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLS 202
+ S +P + SDK + R + + + GD S
Sbjct: 257 GNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS 316
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSGK 230
P V K+ +++ G RHT+ ++ K
Sbjct: 317 PVQVKFPHDQKVVQISCGWRHTIAVTEK 344
>gi|328791214|ref|XP_625074.3| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
mellifera]
Length = 502
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 85/230 (36%), Gaps = 23/230 (10%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + K+ +VY G G +S + LCG D G G LA
Sbjct: 34 NEALIVTKDKMVYAVGSNTSGCLGIGDTQSTLYPKKIKELCGKDIKTFAYGKG-PHVLAL 92
Query: 67 SESGKLITWGS--ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
+E GK+ +WG + G ++ TP ++ A G H +++T GE
Sbjct: 93 TEEGKVYSWGQNCHYELGNTF---NNQALTPGIITNLCNEFIIDIACGSHHSLALTNDGE 149
Query: 125 VYTWGWRE-----CVPSAKVTRDFGSAGSFQKDSTGKQS-ALPTEQAPPSDKRAGEEVVK 178
VY WG C + +D +F TGK+ + + EV
Sbjct: 150 VYAWGQNTSGQVGCHDDTTLVQDIPRKLNFTL--TGKKVICISCGDSFSVVVTNNGEVYS 207
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ EN + D+F PC +T + I KV G HTL LS
Sbjct: 208 WGCNDVGQLGIEN--NNDQF---HPCKITSLAKIVIEKVVCGSIHTLALS 252
>gi|299116338|emb|CBN76142.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 450
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
L ESG++ WG GQ + G+ E PE LP VV +G++H V++ E
Sbjct: 230 VLVLCESGRVFGWGKGL-RGQLGV-GGEMMELPEEVELP--GKVVDLRSGFSHAVAILEN 285
Query: 123 GEVYTWG 129
G+VYTWG
Sbjct: 286 GDVYTWG 292
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
++LA +++G + WGS + GQ + TP LP ++ AA + H +++T+
Sbjct: 204 YSLALTDTGAALAWGS-NSRGQLGDGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTD 262
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP--TEQAPPSDKRAGEEVVKR 179
G V WG + G G+ ST LP T + R+ V+
Sbjct: 263 TGAVLAWG-------SNSNGQLGD-GTTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTS 314
Query: 180 RKTSSAREESENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILS 228
A + N GD T +P V L G IT +AAG H+L L+
Sbjct: 315 AGAVLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALT 365
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ +S +P+ L G + + GG +LA +++G ++ WGS + GQ +
Sbjct: 73 GTTTARS---TPVTVGLPAGTTITALAAGGS-HSLALTDTGVVLAWGS-NSRGQLGDGTT 127
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TP LP ++ AAG H +++T+ G V WG
Sbjct: 128 TDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWG 167
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ +S +P+ L G + + G L + +G ++ WGS + GQ +
Sbjct: 280 GTTTNRS---TPVTVGLPAGTTITALAAGRS-HTLVLTSAGAVLAWGS-NSNGQLGDGTT 334
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TP LP ++ AAG+ H +++T+ G V WG
Sbjct: 335 TDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGAVLAWG 374
>gi|89243623|gb|AAI13827.1| RCCD1 protein [Homo sapiens]
Length = 244
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 19/120 (15%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AA GW H V V+E G++Y WGW E A TR+ G E
Sbjct: 84 AAGGW-HSVCVSETGDIYIWGWNESGQLALPTRNLAEDG---------------ETVARE 127
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E+ + ++T A + + P + F P L+ L G K + G RHT +++
Sbjct: 128 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVT 184
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 156 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGW 194
>gi|322711345|gb|EFZ02919.1| alpha-tubulin suppressor protein Aats1, putative [Metarhizium
anisopliae ARSEF 23]
Length = 364
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 30/124 (24%)
Query: 51 SWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
SW D+ G G G + G L WG DD GQ P P + + A
Sbjct: 250 SWSDI-GAGWGAVYILNRDGTLQAWGR-DDHGQ--------------LPPPNLPRLEQIA 293
Query: 111 AGWAHCVSVTEAGEVYTWGWRE---CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
G H V++++ G+V +WGW E C P + D G+ + + + + P
Sbjct: 294 IGSEHVVALSQDGDVLSWGWGEHGNCGPRVE-----------NNDVKGRWNVIASSKFIP 342
Query: 168 SDKR 171
+D R
Sbjct: 343 ADSR 346
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 41.6 bits (96), Expect = 0.34, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCV 117
G LA +E G+L +WGS + EGQ L S E P + VV+ A G H +
Sbjct: 169 GAHHTLAVNEWGQLFSWGS-NAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVL 227
Query: 118 SVTEAGEVYTWG 129
++T G++Y+WG
Sbjct: 228 ALTNNGKLYSWG 239
>gi|341881694|gb|EGT37629.1| CBN-GLO-4 protein [Caenorhabditis brenneri]
Length = 1384
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 40/100 (40%), Gaps = 16/100 (16%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL--PTEASVVKAAA 111
D+ G AL TSE G L TWG D L G E EP + PT A+ +
Sbjct: 1021 DIACGLSHSALITSE-GSLYTWGKGLD---YQLGHGNKNERMEPHQVFEPTGATWTNVSL 1076
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
G H + TE G VY WG DFG G K
Sbjct: 1077 GNNHTIGATEDGTVYAWG----------KNDFGQCGVVTK 1106
>gi|433547476|ref|ZP_20503684.1| hypothetical protein D478_27117 [Brevibacillus agri BAB-2500]
gi|432181233|gb|ELK38926.1| hypothetical protein D478_27117 [Brevibacillus agri BAB-2500]
Length = 286
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 13/135 (9%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
N + K+ V++WG L +S P ++ G K++ G F LA + G
Sbjct: 143 NHGLALKKDGTVWLWGKLLNSSYNT-------PFQVGGIADVKEIAAG-SNFNLAVKKDG 194
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ WG + G L +TP P + T A++V AAG ++ G+VY WG
Sbjct: 195 TVWAWG---NNGFGQLGINNIYDTPSPTKIGTLANIVSVAAGEFSGYALDVDGKVYAWGH 251
Query: 131 REC--VPSAKVTRDF 143
+ +V +DF
Sbjct: 252 NGYGRLGDGRVCQDF 266
>gi|293344154|ref|XP_001066157.2| PREDICTED: RCC1 domain-containing protein 1-like [Rattus
norvegicus]
Length = 330
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 44/182 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL E+G++ +WG G+HG+ E P EA + +
Sbjct: 169 GAEHALLLCEAGQVFSWGG-----------GRHGQLGHGSLEAELEPRLLEALQGLRMAE 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G++Y WGW E A TR + ++++T
Sbjct: 218 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELN----------D 267
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLI 226
D GEE +A + PA F + P L+ L G K + G RHT +
Sbjct: 268 DGLRGEE--------AALADVGAPA---HFIAIQPFPALLDLPLGSDAVKASCGSRHTAV 316
Query: 227 LS 228
++
Sbjct: 317 VT 318
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+PFP LP + VKA+ G H VT GE+YTWGW E
Sbjct: 290 QPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGE 330
>gi|30695429|ref|NP_199644.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|26450138|dbj|BAC42188.1| regulator of chromosome condensation like [Arabidopsis thaliana]
gi|28973207|gb|AAO63928.1| putative regulator of chromosome condensation (cell cycle
regulatory protein) [Arabidopsis thaliana]
gi|332008269|gb|AED95652.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 455
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 15/164 (9%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A + G L WG + GQ L +G P VVK + GW H +++T G
Sbjct: 152 AIGDDGSLWVWGRSK-RGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDG 210
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
+V+ WG+ V +V G+ G + S + + + E +++
Sbjct: 211 KVFGWGY---VADGRV----GNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVE 263
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ +E++ P PCLV K+ +A G H+LIL
Sbjct: 264 AMSKENDMP------IAWEPCLVEETCNEKVADIACGSDHSLIL 301
>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
Length = 453
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 37/183 (20%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
LAT+ +G++ +WG G L +G + P P P+ + + A G H +++
Sbjct: 89 VLATTNAGEVYSWG---HNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMAL 145
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ---APPSDKRAGEEV 176
+ GE++ WG C G GS G S PT + A K+
Sbjct: 146 SSEGEIFAWGQNNC----------GQVGS------GTTSNQPTPRKVTACIGSKKCISIA 189
Query: 177 VKRRKTSSAREESE----------NPASGDEFFTLSPC-LVTLNPGVKITKVAAGGRHTL 225
+ + +A + E G+ +PC LV LN V IT++A G HTL
Sbjct: 190 CGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQPNPCRLVVLN-NVFITQIACGYAHTL 248
Query: 226 ILS 228
L+
Sbjct: 249 GLT 251
>gi|402581334|gb|EJW75282.1| hypothetical protein WUBG_13810 [Wuchereria bancrofti]
Length = 294
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F +A + SG L WG ++EGQ L + + P P+P SVV G +H +++T
Sbjct: 95 FTMALTASGTLFAWGK-NEEGQ--LGDFTNKDVINPCPVPNINSVVAVECGDSHSIALTH 151
Query: 122 AGEVYTWG 129
G V++ G
Sbjct: 152 EGRVFSCG 159
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A S+ G+L WGS + GQ + SG + P +P+ V+ A G +H VS+ G
Sbjct: 1 MAVSDDGRLFAWGS-NSHGQLAM-SGDILASDTPKRVPSLPETVQVACGASHTVSLNGGG 58
Query: 124 EVYTWG 129
V+ WG
Sbjct: 59 RVFIWG 64
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG + S + +P+P + G K + CG LA + G++ +WG
Sbjct: 90 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEGEVQSWG 146
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + P+ + AAG H +VTE G++Y WGW
Sbjct: 147 R-NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 199
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 284 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 342
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 343 AVTERNNVFAWG 354
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 35/172 (20%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTE 121
SG ++ +WG +D GQ HG+ E P PT+ S +V G H V+ ++
Sbjct: 33 SGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQ 85
Query: 122 AG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE--------QAPPSDKRA 172
+G EVY+WGW DFG G +S+ + LP + Q D
Sbjct: 86 SGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHGIRIKQIACGDSHC 133
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
++ S R ++ GD +L P + G++I VAAG HT
Sbjct: 134 LAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHT 185
>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
Length = 256
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 18 KETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
E VY WG + S + +P P + G K + CG LA + +G++
Sbjct: 94 DEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIA---CGDSHCLAVTMAGEV 150
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 151 QSWGR-NQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGW 207
>gi|449484006|ref|XP_004156756.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206334
[Cucumis sativus]
Length = 1084
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 11/117 (9%)
Query: 22 VYMWGYLPG---------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
VY WG+ G ++ +++P G + +E G++
Sbjct: 208 VYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVIFGLGSRRVRAIAAAKHHTVIATEGGEV 267
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TWGS + EGQ TS TP + +V AA H V+E+GE++TWG
Sbjct: 268 FTWGS-NREGQLGYTSVDTQPTPRRVS-SLRSKIVDVAAANKHTAVVSESGEIFTWG 322
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WG G S P P R+ S SESG++ TWG +
Sbjct: 267 VFTWGSNREGQLGYTSVDTQPTPRRVSSLRSKIVDVAAANKHTAVVSESGEIFTWG-CNR 325
Query: 81 EGQ-SYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP-SA 137
EGQ Y TS TP + AA H + + GEVYTWG R P
Sbjct: 326 EGQLGYGTSNSASNYTPRVVEYLKGKVFARVAAAKFHTICLGVDGEVYTWGHRLVTPRRV 385
Query: 138 KVTRDFGSAGS 148
+ R+ +G+
Sbjct: 386 VIARNLKKSGN 396
>gi|431920246|gb|ELK18281.1| RCC1 domain-containing protein 1 [Pteropus alecto]
Length = 181
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 29/125 (23%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AA GW H V V+E G++Y WGW E Q ALPT
Sbjct: 5 AAGGW-HSVCVSETGDIYIWGWNE----------------------SGQLALPTRSLVED 41
Query: 169 DKRAGEEVVKRRKTSSARE---ESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRH 223
K + ++ K S E+E+ A F ++ P L+ L G K + G RH
Sbjct: 42 KKAVAGQAIRLNKDGSEENRIVEAEDGAPA-AFISVQPFPALLDLPLGSDAVKASCGSRH 100
Query: 224 TLILS 228
T +++
Sbjct: 101 TAVVT 105
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 77 QPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGW 115
>gi|357520093|ref|XP_003630335.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524357|gb|AET04811.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 164
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A + +G+L WG + GQ + +P P VV+ ++GW H V+VT+
Sbjct: 1 MALTSNGQLFGWG-WNKFGQIGIGHNFDCSSPMLVNFPHAQKVVQMSSGWRHTVAVTDRA 59
Query: 124 EVYTWG 129
VY+WG
Sbjct: 60 NVYSWG 65
>gi|449468281|ref|XP_004151850.1| PREDICTED: uncharacterized protein LOC101206334 [Cucumis sativus]
Length = 1085
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 11/117 (9%)
Query: 22 VYMWGYLPG---------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
VY WG+ G ++ +++P G + +E G++
Sbjct: 208 VYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVIFGLGSRRVRAIAAAKHHTVIATEGGEV 267
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TWGS + EGQ TS TP + +V AA H V+E+GE++TWG
Sbjct: 268 FTWGS-NREGQLGYTSVDTQPTPRRVS-SLRSKIVDVAAANKHTAVVSESGEIFTWG 322
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WG G S P P R+ S SESG++ TWG +
Sbjct: 267 VFTWGSNREGQLGYTSVDTQPTPRRVSSLRSKIVDVAAANKHTAVVSESGEIFTWG-CNR 325
Query: 81 EGQ-SYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP-SA 137
EGQ Y TS TP + AA H + + GEVYTWG R P
Sbjct: 326 EGQLGYGTSNSASNYTPRVVEYLKGKVFARVAAAKFHTICLGVDGEVYTWGHRLVTPRRV 385
Query: 138 KVTRDFGSAGS 148
+ R+ +G+
Sbjct: 386 VIARNLKKSGN 396
>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 651
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE 93
S +L P P G K + CG LA + G++ +WG + GQ L + +
Sbjct: 104 SDLLIPQPIIALQGLRIKQIA---CGDSHCLAVTMEGEVQSWGR-NQNGQLGLGTSEDSL 159
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
P+ + AAG H V++TE GE+Y WGW
Sbjct: 160 VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGW 196
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG ++A + +G L WG + GQ + +P P + VV+ + GW H +
Sbjct: 281 GGWRHSMALTSTGLLYGWG-WNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTI 339
Query: 118 SVTEAGEVYTWG 129
+VTE V++WG
Sbjct: 340 AVTEKENVFSWG 351
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 75/208 (36%), Gaps = 34/208 (16%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G ++A +E+G+L WG G L
Sbjct: 161 PQKIQTFQGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 210
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE +V A GW H +SV+ G +YT+GW + +G G
Sbjct: 211 WIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSK----------YGQLGH---- 256
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLS 202
+ S +P + SDK + R + + + GD S
Sbjct: 257 GNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS 316
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSGK 230
P V K+ +++ G RHT+ ++ K
Sbjct: 317 PVQVKFPHDQKVVQISCGWRHTIAVTEK 344
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV++WG
Sbjct: 144 CGYYHSLALSKASEVFSWG 162
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG + S + +P+P + G K + CG LA + G++ +WG
Sbjct: 78 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEGEVQSWG 134
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + P+ + AAG H +VTE G++Y WGW
Sbjct: 135 R-NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 187
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 272 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 330
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 331 AVTERNNVFAWG 342
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 35/172 (20%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTE 121
SG ++ +WG +D GQ HG+ E P PT+ S +V G H V+ ++
Sbjct: 21 SGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQ 73
Query: 122 AG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE--------QAPPSDKRA 172
+G EVY+WGW DFG G +S+ + LP + Q D
Sbjct: 74 SGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHGIRIKQIACGDSHC 121
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
++ S R ++ GD +L P + G++I VAAG HT
Sbjct: 122 LAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHT 173
>gi|328767985|gb|EGF78033.1| hypothetical protein BATDEDRAFT_91148 [Batrachochytrium
dendrobatidis JAM81]
Length = 497
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 59 GCGFALATSESGKLITWGS------ADDEGQSYLTSGKHG----ETPEPFPLPTEASVVK 108
G F+LA +E G L WGS D + SY++ + P+P + +V
Sbjct: 184 GLDFSLAITEDGTLFAWGSPQYGQLGDGKDHSYISGTSRMIYDPQMPKPITKLEDKKIVA 243
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G H +++ + G VY+WG
Sbjct: 244 IACGTNHSLALDDQGAVYSWG 264
>gi|396490912|ref|XP_003843447.1| hypothetical protein LEMA_P075570.1 [Leptosphaeria maculans JN3]
gi|312220026|emb|CBX99968.1| hypothetical protein LEMA_P075570.1 [Leptosphaeria maculans JN3]
Length = 606
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 20/122 (16%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVC--GGGCGFALATSESGKLITWGSAD---- 79
G+ + + +L+P R+ KDV GG +A ++ G+++ WG D
Sbjct: 442 GFPDNAGADDASLLTP---RIIHSLEGKDVASLAGGAHHNIAITKDGQVLVWGRCDGSQT 498
Query: 80 -----------DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
D + +GK EP P+P +V + G H + + + G+ Y W
Sbjct: 499 GIPADVLAAEEDPDKVLKNNGKPKILVEPTPIPNLKDIVAGSCGPDHTIVIDKNGKAYAW 558
Query: 129 GW 130
G+
Sbjct: 559 GF 560
>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 872
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 36 SPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
+P P P + G K V G F+LA + G++ +WG +++ Q L +
Sbjct: 171 TPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGF-NEKCQLGLGHRYNQSV 229
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ P +V A G H V ++ AG VYT+G
Sbjct: 230 PQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFG 264
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 80/213 (37%), Gaps = 28/213 (13%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLT 87
G + L PI G + V CG ++A E+G + WG A EGQ L
Sbjct: 9 GAGRDNKEALEPILLERFRGKRIRSVA---CGEQHSMAVGETGDVYVWGRAK-EGQ--LG 62
Query: 88 SGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
+G+ P+ E VV G+ HC++VT G++Y WG
Sbjct: 63 NGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHK---------- 112
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL-- 201
GS K+ G L + + G + EE E + F +
Sbjct: 113 HVEGSANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTP 172
Query: 202 ----SPCLVTLNPGVKITKVAAGGRHTLILSGK 230
SP +VT VK+ +VAAG +L ++ +
Sbjct: 173 YTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQ 205
>gi|408500850|ref|YP_006864769.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465674|gb|AFU71203.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1184
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 47 CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP----LPT 102
GG + DV GG ++LA GK WG+ + GQ + TP P P P
Sbjct: 679 SGGYAPYDVTGG---YSLAVGSDGKAYAWGN-NKYGQLGNGTTTQQSTPVPVPKPAGTPM 734
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + ++AAAG H +++ G VY WG
Sbjct: 735 DFTYMQAAAGGHHSLAIGSDGYVYAWG 761
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 19 ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
E VY WG + S + +P P + G K + CG LA + +G++
Sbjct: 95 EQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIA---CGDSHCLAVTMAGEVQ 151
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 152 SWGR-NQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGW 207
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 17/131 (12%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ + S SG L T+G + GQ + P ++S+ + + GW H +
Sbjct: 240 CGWRHTITVSSSGSLYTYGWSK-YGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTM 298
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++T G++Y WGW + FG G D P + P D++ +
Sbjct: 299 ALTSDGKLYGWGWNK----------FGQVGVGDTDD----HCFPVQVKFPEDQKVAQVAC 344
Query: 178 KRRKTSSAREE 188
R T + E+
Sbjct: 345 GWRHTLAFTEK 355
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + P P + V + A GW H +
Sbjct: 292 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTL 350
Query: 118 SVTEAGEVYTWG 129
+ TE V++WG
Sbjct: 351 AFTEKKNVFSWG 362
>gi|301768835|ref|XP_002919849.1| PREDICTED: RCC1 domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 296
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP +A V+A+ G H VT GE+YTWGW
Sbjct: 208 QPFPALLDLPQDADAVQASCGSRHTAVVTRTGELYTWGW 246
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 21/121 (17%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AA GW H V V+EAG++Y WGW E A TR G + K+++G
Sbjct: 136 AAGGW-HSVCVSEAGDIYIWGWNESGQLALPTRSLAEDGKTVAKEASGLN---------- 184
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E + R+T+ A + + P + F P L+ L + + G RHT ++
Sbjct: 185 ------EGGSEGRRTARAEDGAPAPFIALQPF---PALLDLPQDADAVQASCGSRHTAVV 235
Query: 228 S 228
+
Sbjct: 236 T 236
>gi|294935296|ref|XP_002781372.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
gi|239891953|gb|EER13167.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
Length = 1285
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFP-LPTEASVVKAAAGWAHC 116
G A A S SG L TWGS + +GQ + H E P P LP +V A+ G H
Sbjct: 244 GDAHACAISISGVLFTWGS-NRKGQLGRENAGHREVLPGPVSCLPPTKAVQMASCGAQHT 302
Query: 117 VSVTEAGEVYTWG 129
+V + G+VY WG
Sbjct: 303 AAVVQGGQVYLWG 315
>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
Length = 1152
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
K CG C AL ++ G++ WG G + + TP+ SVV + G
Sbjct: 610 KVCCGSQCSLALTST--GQVYVWGCGPSLGTGSVDATS--ATPKLLLALQSHSVVDISVG 665
Query: 113 WAHCVSVTEAGEVYTWG 129
+HCV++T+ VY WG
Sbjct: 666 DSHCVALTQDNNVYAWG 682
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAGWAHCVS 118
LA + GK+ +WG D Y G + P E + V AAG+ H +
Sbjct: 463 LALTLDGKVYSWGDGD-----YGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAA 517
Query: 119 VTEAGEVYTWG 129
VTE GE+YTWG
Sbjct: 518 VTEDGELYTWG 528
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K + CG ++A +++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWG-Y 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V++ A+G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWG 258
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 73/187 (39%), Gaps = 31/187 (16%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSV 119
L +E G+L WG G S L +G + P + T V + + G H +++
Sbjct: 87 VLLVTEDGELYAWGH---NGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T GEV+ WG+ C G GS ST Q P + + + +
Sbjct: 144 THEGEVFAWGYNNC----------GQVGS---GSTANQPT-PRKVSNCLQNKVIVNIACG 189
Query: 180 RKTSSAREE-----------SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ +S A + + G+ L+PC + G + ++A+G H+L L+
Sbjct: 190 QTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALT 249
Query: 229 GKSLESA 235
+ L A
Sbjct: 250 DEGLLYA 256
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 41.2 bits (95), Expect = 0.41, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G ++A +E G+L WG+ D T+ P + + + G HCV+
Sbjct: 91 GRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVA 150
Query: 119 VTEAGEVYTWG 129
++ G+++TWG
Sbjct: 151 LSRDGQLFTWG 161
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
G EK+P+ P + G K+V CGG L G + T GS + GQ L
Sbjct: 13 GIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLM--HDGSVYTCGS-NSCGQ--LGH 67
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
K G +PE + + G H ++V E G+++ WG
Sbjct: 68 DKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWG 108
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+++A S G ++TWG A+ +GQ L +G + P + + + +AG AH ++VTE
Sbjct: 271 YSIALSSDGSVLTWG-ANSDGQ--LGNGNTDQNSVPTKISSLPLMKGISAGEAHSLAVTE 327
Query: 122 AGEVYTWGWRE 132
G VY WG +
Sbjct: 328 DGFVYAWGLND 338
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLP------GTSPEKSPILSPIPARLCGGDSWKDVC 56
M G E + ++ VY WG G +P+L+P+ ++ G VC
Sbjct: 312 MKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPV--QVQGLTDIDAVC 369
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G F+LA G++ WG +DEGQ L G + + P + A + A G H
Sbjct: 370 AGAT-FSLALGIDGRVWAWG-LNDEGQ--LGDGTNTNSTTPVEVTNLAKISAVACGSDHS 425
Query: 117 VSVTEAGEVYTWGWRE 132
+++ G+V +WG +
Sbjct: 426 LAI-RNGKVKSWGLND 440
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T+P + L+ I A CG D +LA +GK+ +WG +DEGQ L G
Sbjct: 404 TTPVEVTNLAKISAVACGSD-----------HSLAI-RNGKVKSWG-LNDEGQ--LGDGS 448
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P + + +V AAG +H +++T G +Y WG
Sbjct: 449 TRSSSAPLDVTGLSDIVYVAAGESHSLAITSKGNIYVWG 487
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 485
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 37 PILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
PI P G K V G F + + G + T G+ + GQ L G + P
Sbjct: 203 PIFRPRLVESLKGIPCKQV-AAGLNFTVFLTRQGHVYTCGT-NTHGQ--LGHGDTQDRPT 258
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + +SVV+ AAG ++ +SVTE G VY++G
Sbjct: 259 PKMIEVLSSVVQIAAGPSYILSVTENGTVYSFG 291
>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 437
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Query: 22 VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDV--CGGGCGFALATSESGKLITW 75
V+ WG G P + P+P R G K V +LA G ++ W
Sbjct: 295 VWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAW 354
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G A D GQ + H + P L + SV+ AAG H ++V E G V WG
Sbjct: 355 G-AGDRGQLGQGAQNHEDHPT---LASLHSVICLAAGRYHSLAVAENGAVLAWG 404
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 40 SPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
SP+ R + +++ G CG +LA + G + WGS D GQ + K+ + P
Sbjct: 152 SPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNSD-GQIGDGTLKNRQNPRQ 210
Query: 98 ---FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
F P A V AAG+AH ++++ G V+ WG
Sbjct: 211 VMRFGKPL-AGVKAVAAGFAHSLALSVDGTVWAWG 244
>gi|367050184|ref|XP_003655471.1| hypothetical protein THITE_43284 [Thielavia terrestris NRRL 8126]
gi|347002735|gb|AEO69135.1| hypothetical protein THITE_43284 [Thielavia terrestris NRRL 8126]
Length = 409
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 16/81 (19%)
Query: 52 WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
W++V G G G G+L++WG DD GQ PE V + A
Sbjct: 297 WREV-GAGWGSVFVLRADGRLVSWGR-DDHGQM---------APEDL-----GPVRRVAV 340
Query: 112 GWAHCVSVTEAGEVYTWGWRE 132
G H +++TEAG+V WGW E
Sbjct: 341 GSEHALALTEAGDVVAWGWGE 361
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|340054463|emb|CCC48760.1| putative regulator of chromosome condensation [Trypanosoma vivax
Y486]
Length = 1182
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 12/124 (9%)
Query: 22 VYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
+Y+WG G + + P + D + G CG FA G + TWGS
Sbjct: 458 MYVWGQNAVGQCLSSTSSIVKAPELIDVSDRGGTIMSGACGQSFAALVFSCGSICTWGSL 517
Query: 79 DDEGQSYLTSG-KHGETPEPFPL--------PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G + G + + P+ + P +V AG HC+++T G VY+WG
Sbjct: 518 KMLGVTISPEGIRDVDAPDDYKCSKSFNVFKPISERIVALRAGEWHCLAITSRGSVYSWG 577
Query: 130 WREC 133
C
Sbjct: 578 VDHC 581
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 463 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 517
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 518 YRHSAAVTEDGELYTWG 534
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4240 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4287
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4288 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4328
>gi|374724410|gb|EHR76490.1| regulator of chromosome condensation RCC1 with PRK-like repeats
[uncultured marine group II euryarchaeote]
Length = 1639
Score = 41.2 bits (95), Expect = 0.42, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 63 ALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
A A ++G ++ WG AD+ GQ + T+ + P LP+ + V GW H ++
Sbjct: 610 ACAILDNGSMMCWG-ADNTGQLGNGATTTTDQDEPVHVSLPSGRTAVDLTVGWGHACAIL 668
Query: 121 EAGEVYTWGW 130
+ G + WGW
Sbjct: 669 DTGSLMCWGW 678
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 463 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 517
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 518 YRHSAAVTEDGELYTWG 534
>gi|47219820|emb|CAG03447.1| unnamed protein product [Tetraodon nigroviridis]
Length = 162
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 27/121 (22%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V++ AAG H V +++ G++Y WGW E G S + LP + +
Sbjct: 3 VIRVAAGGWHSVCISDGGDLYVWGWNE-------------TGQLGLPSRSLRRTLPQQSS 49
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRH 223
P +AG + +EE F ++ P L+ ++P +I V+ G RH
Sbjct: 50 P----KAGASSAEAPHAGGKQEEV--------FISIQAFPALLDVSPSCEIMAVSCGSRH 97
Query: 224 T 224
T
Sbjct: 98 T 98
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Equus caballus]
Length = 4860
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|322785446|gb|EFZ12117.1| hypothetical protein SINV_05294 [Solenopsis invicta]
Length = 585
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 55/140 (39%), Gaps = 37/140 (26%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+V A G H V++ E GE+Y WG C G AG S++ T Q
Sbjct: 184 IVDIACGSHHSVALNEDGEIYAWGQNNC----------GQAG----------SSITTNQG 223
Query: 166 PP---SDKRAGEEVVK----RRKTSSAREESE----------NPASGDEFFTLSPCLVTL 208
P + AG++V + + T + E E G+ ++PC +
Sbjct: 224 VPRQVNSNLAGKKVAQIACGQTSTVALLENGEVYGWGYNGVGQLGIGNYVNQMTPCRIGT 283
Query: 209 NPGVKITKVAAGGRHTLILS 228
G I KVA G HTL L+
Sbjct: 284 LLGTVIVKVACGYVHTLALT 303
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Pongo abelii]
Length = 4864
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|294816128|ref|ZP_06774771.1| BNR repeat domain protein [Streptomyces clavuligerus ATCC 27064]
gi|326444463|ref|ZP_08219197.1| regulator of chromosome condensation-like protein [Streptomyces
clavuligerus ATCC 27064]
gi|294328727|gb|EFG10370.1| BNR repeat domain protein [Streptomyces clavuligerus ATCC 27064]
Length = 406
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P R+ G K V G C F+LA ESG++ +WG GQ L +G + + P +
Sbjct: 173 LPDRVQGLPKVKQVSAG-CDFSLALLESGEVYSWGRG-MYGQ--LGNGDYAVSSVPVQVT 228
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
++V AG H ++ T A V +WG+
Sbjct: 229 DLTNIVSIDAGCHHALAQTNANTVKSWGYN 258
>gi|71417839|ref|XP_810673.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875241|gb|EAN88822.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 841
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSY---------------LTSGKHGETPEPFPLPTE 103
GC F +A S +G++ TWG+ + G L + H P +
Sbjct: 579 GCFFGMALSITGEVYTWGAIECCGNGLQPLPTDVPANLIMNSLGNESHASVLLPVRVSGL 638
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWG 129
+S+V AAG H V++ GEV+ WG
Sbjct: 639 SSIVSVAAGAWHAVALNAIGEVFVWG 664
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---------VVKA 109
G FA A +E ++ TWGS + GQ L G P+ + + +E +++
Sbjct: 523 GICFAAAINEGQRVFTWGS-NTYGQCGL-----GVNPKEYRIISEPREITWLADKLIIQV 576
Query: 110 AAGWAHCVSVTEAGEVYTWGWREC 133
A G ++++ GEVYTWG EC
Sbjct: 577 ACGCFFGMALSITGEVYTWGAIEC 600
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4223 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4270
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4271 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4311
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4213 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4260
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4261 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4301
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
Length = 485
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 37 PILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
PI P G K V G F + + G + T G+ + GQ L G + P
Sbjct: 203 PIFKPRLVESLKGIPCKQV-AAGLNFTVFLTRKGHVYTCGT-NTHGQ--LGHGDTQDRPT 258
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + +SVV+ AAG ++ +SVTE G VY++G
Sbjct: 259 PKMIEVLSSVVQIAAGPSYILSVTENGTVYSFG 291
>gi|196004750|ref|XP_002112242.1| hypothetical protein TRIADDRAFT_56074 [Trichoplax adhaerens]
gi|190586141|gb|EDV26209.1| hypothetical protein TRIADDRAFT_56074 [Trichoplax adhaerens]
Length = 417
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 42 IPARL---CGGDSWKDVCGGGCGFALATSESGKLITWG-SADDEGQSYLTSGKHGETPEP 97
+P R+ C + V GG F LA +E+G + WG A G + P
Sbjct: 281 LPKRISLDCIKEKIVQVAAGG-SFCLACTETGNVFVWGFGALGVGNEIMDC----REPRL 335
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P A V K A H V++++ G+VYTWG
Sbjct: 336 IRFPDGAKVKKIACSINHAVALSDTGKVYTWG 367
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G++ T+G G L G+
Sbjct: 4223 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGQVYTFGQDRLIG---LPEGR 4270
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++T G++Y WG
Sbjct: 4271 ARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWG 4311
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4217 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4264
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4265 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4305
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Felis catus]
Length = 4861
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4228 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4275
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4276 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4316
>gi|403331221|gb|EJY64545.1| hypothetical protein OXYTRI_15423 [Oxytricha trifallax]
Length = 410
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 20 TVVYMWGYLPGTSPE----KSPILSP--IPARLCGGDSWK-DVCGGGCGFALATSESGKL 72
T VY+W +P P+ K I P IP ++ D G + +E GKL
Sbjct: 14 TSVYLWTSMPRLGPKATEIKQQIQIPKGIPQKMEAFDKLNVKKLNIGLRHSAVITEDGKL 73
Query: 73 ITWGSAD----DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
T+GS + G + + E F +V+ G H ++T GEVYTW
Sbjct: 74 YTFGSGNWGPLGHGSEKDVKFDNPQLVEFFE-KRNKKIVEVGLGEYHTAALTSDGEVYTW 132
Query: 129 GW--RECVPSAKVTRDFGSAG 147
G+ ++ + + +T++ G G
Sbjct: 133 GYGGKQTLFNWMITQEVGGLG 153
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
paniscus]
Length = 4798
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|383320311|ref|YP_005381152.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
gi|379321681|gb|AFD00634.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
Length = 428
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP------- 95
PAR+ G D+ KDV GG F +A G + WG D Q L G P
Sbjct: 229 PARVGGLDNVKDVDAGGT-FTIALKNDGTVWAWG---DGSQGQLGKGFKMNGPLDDPYQS 284
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
P + + +V +AG H +++ + G ++TWG+
Sbjct: 285 TPIQVIGLSDIVDISAGDRHAMALKDDGTIWTWGYN 320
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
cuniculus]
Length = 4860
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Pan troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4220 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4267
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4268 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4308
>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Ailuropoda melanoleuca]
Length = 348
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V + G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWG---HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|71651514|ref|XP_814434.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879404|gb|EAN92583.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 841
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSY---------------LTSGKHGETPEPFPLPTE 103
GC F +A S +G++ TWG+ + G L + H P +
Sbjct: 579 GCFFGMALSITGEVYTWGAIECCGNGLQPLPTDVPANLIMNSLGNESHASVLLPVRVSGL 638
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWG 129
+S+V AAG H V++ GEV+ WG
Sbjct: 639 SSIVSVAAGAWHAVALNAIGEVFVWG 664
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---------VVKA 109
G FA A +E ++ TWGS + GQ L G P+ + + +E +++
Sbjct: 523 GICFAAAINEGQRVFTWGS-NTYGQCGL-----GVNPKEYRIISEPREITWLADKLIIQV 576
Query: 110 AAGWAHCVSVTEAGEVYTWGWREC 133
A G ++++ GEVYTWG EC
Sbjct: 577 ACGCFFGMALSITGEVYTWGAIEC 600
>gi|408500686|ref|YP_006864605.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465510|gb|AFU71039.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1073
Score = 41.2 bits (95), Expect = 0.45, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Query: 23 YMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
Y WGY + P K + I RL G ++L T+ G + +WG
Sbjct: 314 YSWGYGGTSQPSKVALPDGIRTRLISA---------GHDYSLVTASDGNIYSWGDNSSGQ 364
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
T G+ P P + +A AG+ H +++ G +Y WG
Sbjct: 365 LGQDTGGETTNQPGKAVTPDGVTYTQAIAGYRHILAMGSDGYLYGWG 411
Score = 39.3 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 23/185 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G F+LA G L +WG+ + +GQ T + P +P ++ +AG +
Sbjct: 79 AGKDFSLALDSLGVLYSWGN-NSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGDDY 137
Query: 116 CVSVTEAGEVYTWGWRE------------CVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
V++ +Y+WG E +P +V + SF + STG L
Sbjct: 138 AVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVL--- 194
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
A SD V SS + E + + +P V+L GVKIT+V AGG+
Sbjct: 195 -AVCSDG----TVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGGKA 249
Query: 224 TLILS 228
+L L+
Sbjct: 250 SLALA 254
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Nomascus leucogenys]
Length = 4855
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
gallus]
Length = 4860
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4225 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4272
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4273 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4313
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4226 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4273
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4274 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4314
>gi|115373014|ref|ZP_01460317.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310821893|ref|YP_003954251.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|115369926|gb|EAU68858.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309394965|gb|ADO72424.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 864
Score = 41.2 bits (95), Expect = 0.45, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
++P+ + GG + GG +LA ++ GKL WG A+ GQ L G P
Sbjct: 164 VTPVSIVIPGGAA---AVSGGLNHSLALAKDGKLWAWG-ANTYGQ--LGDGTTANRLAPV 217
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + AAGW H +++ G V+ WG
Sbjct: 218 SVNIPGGAIAIAAGWYHSLAIARDGRVWAWG 248
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4228 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4275
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4276 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4316
>gi|156848822|ref|XP_001647292.1| hypothetical protein Kpol_1002p82 [Vanderwaltozyma polyspora DSM
70294]
gi|156117977|gb|EDO19434.1| hypothetical protein Kpol_1002p82 [Vanderwaltozyma polyspora DSM
70294]
Length = 479
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 18 KETVVYMWG----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
+E VV+ WG + G + L + R G K + G A + GK++
Sbjct: 235 EEGVVFAWGNGQQHQLGRKVMERFRLKTLDPRPFGLKQVKYIASGE-NHCFAIKKDGKVV 293
Query: 74 TWGSADDEGQSYLT----SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+WG + GQ ++ G E+P+ LP + V AAG H + ++E G++YT+G
Sbjct: 294 SWG-LNQFGQCGISEDIEDGALVESPKKVLLPEDFKVKSIAAGEHHSLVLSEEGDLYTFG 352
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
R + +++D ++ KD GK ++P
Sbjct: 353 -RLDMFEVGISKDKLPESAY-KDEHGKARSIPI 383
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4226 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4273
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4274 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4314
>gi|395770833|ref|ZP_10451348.1| hypothetical protein Saci8_13710 [Streptomyces acidiscabies 84-104]
Length = 393
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P R+ G K + G C F+LA E+GK+ WG GQ L +G + P +
Sbjct: 160 VPDRVQGMPKAKQISAG-CDFSLALLENGKVYAWGRG-IHGQ--LGTGNRATSSVPRQVT 215
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+VK AG H +++T V +WG+
Sbjct: 216 GLEDIVKIDAGCYHALAITADNTVKSWGYN 245
>gi|213514362|ref|NP_001133817.1| Williams-Beuren syndrome chromosomal region 16 protein homolog
[Salmo salar]
gi|209155436|gb|ACI33950.1| Williams-Beuren syndrome chromosomal region 16 protein homolog
[Salmo salar]
Length = 450
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
++A S+ G+L WG+++ S +T +P P V + A G + E
Sbjct: 281 SMAVSQDGQLYGWGNSEYLQLSSVTEATQINSPRLLPFERVGKVTQVACGGTQVAILNER 340
Query: 123 GEVYTWGW 130
GEV+ WG+
Sbjct: 341 GEVFVWGY 348
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4237 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4284
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4285 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4325
>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 485
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 37 PILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
PI P G K V G F + + G + T G+ + GQ L G + P
Sbjct: 203 PIFRPRLVESLKGIPCKQV-AAGLNFTVFLTRKGHVYTCGT-NTHGQ--LGHGDTQDRPT 258
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + +SVV+ AAG ++ +SVTE G VY++G
Sbjct: 259 PKMIEVLSSVVQIAAGPSYILSVTENGTVYSFG 291
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4237 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4284
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4285 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4325
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4228 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4275
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4276 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4316
>gi|299744444|ref|XP_001831041.2| hypothetical protein CC1G_03932 [Coprinopsis cinerea okayama7#130]
gi|298406129|gb|EAU90663.2| hypothetical protein CC1G_03932 [Coprinopsis cinerea okayama7#130]
Length = 542
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 59 GCGFALATSESGKLITWGSADD-------EGQSYLTSGKHGETPEPFPLPT----EASVV 107
G F+L +++GK+ ++GSA+ G+ LT K G E P+ + VV
Sbjct: 164 GISFSLVLTDTGKVFSFGSAEKGQLGNGVTGERILTGNKTGFDIEWQPVFVKELKDKKVV 223
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR 131
K ++G H +++ +AG VY WG+
Sbjct: 224 KISSGQQHSLAIDDAGTVYGWGFN 247
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K IL CG K CG F++A ++ G + T+G G +
Sbjct: 4231 SSPQKVDIL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4281
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
H P+ PL + A G H ++++ G+VY WG
Sbjct: 4282 HNR-PQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWG 4319
>gi|159463544|ref|XP_001690002.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283990|gb|EDP09740.1| predicted protein [Chlamydomonas reinhardtii]
Length = 297
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 76 GSADDEGQSY---------LTSGKHGE--TP-EPFPLPTEASVVKAAAGWAHCVSVTEAG 123
G+ D EGQ++ L +G++ TP +P P+P V +AA GW H ++V G
Sbjct: 162 GAVDGEGQAFAWGHGTGWQLGTGRNTSELTPVKPQPVPGLPLVSQAAVGWKHSLAVGRDG 221
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
+++WGW + T D+G D + + P + S R
Sbjct: 222 RLFSWGWSGAMGQGTFT-DYGGGQLGHGDDQDRWAPEPVLRLHTSRHR 268
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4226 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4273
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4274 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4314
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4226 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4273
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4274 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4314
>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Papio anubis]
Length = 355
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 13/136 (9%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCG--GDSWKDVCGGGC 60
G+ E + + E V+ Y GT +S + +P +L G G K + G
Sbjct: 28 GTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---VPKKLEGLSGKKIKSLSYGSG 84
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCV 117
L ++E G + WG G S L +G + P + T VV+ A G H +
Sbjct: 85 PHVLLSTEDGVVYAWG---HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSM 141
Query: 118 SVTEAGEVYTWGWREC 133
++ GEV+ WG+ C
Sbjct: 142 ALAADGEVFAWGYNNC 157
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G + +SG+++ +G + GQ L +G + P L S+V+AA G+ H
Sbjct: 989 GYAHTIVVLKSGEVMVFGGGE-VGQ--LGTGMRKDLLVPTKLQAMPSIVQAACGYCHTAL 1045
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+TEAGEVYT G + ++ G A + Q D
Sbjct: 1046 LTEAGEVYTCG-------SAMSGQLGHADNLQND 1072
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 31/165 (18%)
Query: 92 GETPEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
G+ PF L + VV + GW HC ++TE G VYTWG GS
Sbjct: 862 GKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRN------------GSGELGH 909
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-----------GDEFF 199
D +G P +Q + +EVV + + AR ES + GD
Sbjct: 910 GDKSGVPQLHP-KQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTL 968
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSGKSLESAEPKRLIFSG 244
P + + +T++AAG HT+++ L+S E ++F G
Sbjct: 969 HWLPVPIKTLRKMHVTQLAAGYAHTIVV----LKSGEV--MVFGG 1007
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
VCGG LA +ESG + WG+ GQ L P P + V + AAG+A
Sbjct: 935 VCGGE--HTLARTESGSVYGWGNGRI-GQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYA 991
Query: 115 HCVSVTEAGEVYTWG 129
H + V ++GEV +G
Sbjct: 992 HTIVVLKSGEVMVFG 1006
>gi|307203968|gb|EFN82875.1| Williams-Beuren syndrome chromosomal region 16 protein-like protein
[Harpegnathos saltator]
Length = 441
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 12/130 (9%)
Query: 8 REENEKMEECKETVVYMWGY-----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
++ + + E E + WG L E P S + L G K C C
Sbjct: 215 QDHSMLLTETGEVYTFGWGADGQTGLAHYRNEYQP--SLVKGDLAGQRIIKVACVADC-- 270
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKH--GETPEPFPLPTEASVVKAAAGWAHCVSVT 120
LA S+ GK+ WG+++ GQ H E +V AAG C+ +
Sbjct: 271 VLALSDKGKVFGWGNSE-YGQLSTKDINHQINIATELDMFQDLGHIVDIAAGGCFCMVLN 329
Query: 121 EAGEVYTWGW 130
+AG VY WG+
Sbjct: 330 DAGNVYVWGY 339
>gi|219128407|ref|XP_002184405.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404206|gb|EEC44154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 643
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEG---QSYLTSG-KHGE 93
++ + R+ G + CG G AL S SG++ WGS + + LT+G H
Sbjct: 161 VMQRLLPRVIGSPVLQVACGSWHGLAL--SASGRVWAWGSNRTQQCGRKPTLTAGSNHAP 218
Query: 94 TP-EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
T P P+P E + AAG +H V++ +VY WG
Sbjct: 219 TVLVPLPVPLEVMATQIAAGRSHSVAIAR-DQVYCWG 254
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4233 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4280
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++T G+VY WG
Sbjct: 4281 ARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWG 4321
>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
SB210]
Length = 1146
Score = 40.8 bits (94), Expect = 0.48, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 19/138 (13%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
VY WG GT +K S PA + + K V CG + A +++G + TWG
Sbjct: 653 VYSWG---GTLHKKVGQRSGKPAPIQQLNK-KGVIQVDCGDYHSAAITQNGDIYTWGGGG 708
Query: 80 ---DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
++GQ L K E PE +VK + G H +++T E++ WG E
Sbjct: 709 QDYNKGQLGLGHVKDIENPEKLKFFEGKKIVKVSCGQFHTMALTSENELFGWGAGE---- 764
Query: 137 AKVTRDFGSAGSFQKDST 154
FG G+ + + T
Sbjct: 765 ------FGELGTSKHEYT 776
Score = 38.5 bits (88), Expect = 2.6, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG LA +++ ++ +WG G + G+ P P + V++ G H
Sbjct: 638 ACGDYHTLALTDTDQVYSWG-----GTLHKKVGQRSGKPAPIQQLNKKGVIQVDCGDYHS 692
Query: 117 VSVTEAGEVYTWG 129
++T+ G++YTWG
Sbjct: 693 AAITQNGDIYTWG 705
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4226 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4273
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++ G+VY WG
Sbjct: 4274 ARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4314
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Meleagris gallopavo]
Length = 4334
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 37/244 (15%)
Query: 18 KETVVYMWG-YLPGTSPEKSP------ILSPIPARLCGGDSWKDVCGGGCG--FALATSE 68
KE VY+WG L ++S P+ + G K + CG +LA +
Sbjct: 188 KEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQI---DCGDFHSLALDD 244
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
+G L +WG + +G+ + ETP+ + + AG H +++T +VY W
Sbjct: 245 NGTLYSWGVGE-KGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAW 303
Query: 129 G---WREC---------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR-AGEE 175
G + +C +P G+ S+ DS +Q L + PP K+ A E
Sbjct: 304 GDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSV-QQEILEFFKDPPKIKQIAAGE 362
Query: 176 VVKRRKTSSA--------REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ TSS ++ + D + P LV K +VAAG H+L L
Sbjct: 363 MHTLVLTSSGQIFSFGYNQQGQLGHNTVDNY--CRPKLVEGMLNHKTVQVAAGRNHSLCL 420
Query: 228 SGKS 231
+ K+
Sbjct: 421 TNKN 424
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 14 MEECKETVVYMWGYLPGTSPE-----KSPILSPIPARLCGGDSWKDV--CGGGCGFALAT 66
+++ K+ Y+W + T E + +L +P R+ G K + GG L T
Sbjct: 76 LDQIKKYHAYVWSFGQNTKGELGTGHYNEVL--MPERVRGLPKLKVIFLSSGGKHSGLVT 133
Query: 67 SESGKLITWGS--ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
E GKL GS D G +T+G +T +P L T+ + + A G H +++++ G+
Sbjct: 134 -EDGKLWMCGSNLHDKLGLEGITTGSK-KTFKPVELLTQIFIKQVACGDYHTLALSKEGQ 191
Query: 125 VYTWG 129
VY WG
Sbjct: 192 VYVWG 196
>gi|356518146|ref|XP_003527743.1| PREDICTED: protein RCC2-like [Glycine max]
Length = 548
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 19/145 (13%)
Query: 5 GSKREENEKMEECKETVVYMW---GYLPGTSPEKSPILSPI---PARLCGGDSWKDVCGG 58
GS R + E ++ + W G L S ++ I P R D CGG
Sbjct: 118 GSGRSHTVVVTEDGNSLAFGWNKHGQLGSGSVRNGMLVFKIESSPVRCLVSDVKHTACGG 177
Query: 59 GCGFALATSESGKLITWG---------SADDEGQSYLTSGKHGETPEPFPLPTEA----S 105
L++ E ++T G D+E S +S + P+P P A +
Sbjct: 178 DFTVWLSSVEGASILTAGLPQYGQLGHGTDNEYNSKDSSVRLVYEPQPRPRAIAALAGET 237
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGW 130
+VK A G H V+V + G VYTWG+
Sbjct: 238 IVKVACGTNHTVAVDKNGFVYTWGF 262
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE 93
S +L P P G K + CG LA + G++ +WG + GQ L + +
Sbjct: 105 SDLLIPQPIIALQGLRIKQIA---CGDSHCLAVTMEGEVQSWGR-NQNGQLGLGNTEDSL 160
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
P+ + AAG H V++TE GE+Y WGW
Sbjct: 161 VPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGW 197
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG ++A + +G L WG + GQ + +P P + VV+ + GW H +
Sbjct: 282 GGWRHSMALTSTGLLFGWG-WNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTI 340
Query: 118 SVTEAGEVYTWG 129
+VTE V++WG
Sbjct: 341 AVTEKENVFSWG 352
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 76/208 (36%), Gaps = 34/208 (16%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G ++A +E+G+L WG G L
Sbjct: 162 PQKIQAFKGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 211
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE +V A GW H +SV+ +G +YT+GW + +G G
Sbjct: 212 WNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSK----------YGQLGH---- 257
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLS 202
+ S +P + SDK + R + + + GD S
Sbjct: 258 GNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCS 317
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSGK 230
P V ++ +++ G RHT+ ++ K
Sbjct: 318 PVQVKFPQDQRVVQISCGWRHTIAVTEK 345
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 30/183 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA------AAG 112
G +A + +WG +D GQ HG+T + PLPT+ S + A A G
Sbjct: 22 GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDR-PLPTQLSALDAQHIDSIACG 74
Query: 113 WAHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
H ++ +E+ E+Y+WGW DFG G L +Q
Sbjct: 75 ADHTLAYSESRNELYSWGW----------GDFGRLGHGNSSDLLIPQPIIALQGLRIKQI 124
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D ++ S R ++ G+ +L P + GV I VAAG H++
Sbjct: 125 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSV 184
Query: 226 ILS 228
++
Sbjct: 185 AIT 187
>gi|427795769|gb|JAA63336.1| Putative e3 ubiquitin-protein ligase herc2, partial [Rhipicephalus
pulchellus]
Length = 561
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WG G S P P ++ G + G CG ++A E+G++ WG
Sbjct: 179 VYAWGQNNCGQVGSGSTTNQPTPRKVSSGIGGRRCIGVACGQTSSMAVMENGEVFGWGY- 237
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G + P + VV K G+AH +++++ G +YTWG
Sbjct: 238 --NGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWG 288
>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
niloticus]
Length = 531
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVT 120
L +E G+L WG G S L +G + P + V + A G H +++T
Sbjct: 88 LLATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALT 144
Query: 121 EAGEVYTWGWREC 133
+ GEVY WG+ C
Sbjct: 145 DTGEVYAWGYNNC 157
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P R+ K CG +LA ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P L V + +G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWG 258
>gi|328766889|gb|EGF76941.1| hypothetical protein BATDEDRAFT_36131 [Batrachochytrium
dendrobatidis JAM81]
Length = 471
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A + G++ WG+ D + + E P+ +P +V+ AG H V+V G+
Sbjct: 193 ALTREGRVYAWGTFRDNTGIFGFAPGIKEQALPYLMPDLKGIVQINAGTNHLVAVARDGK 252
Query: 125 VYTWGWRE 132
+YTWG E
Sbjct: 253 IYTWGVGE 260
>gi|255719666|ref|XP_002556113.1| KLTH0H05390p [Lachancea thermotolerans]
gi|238942079|emb|CAR30251.1| KLTH0H05390p [Lachancea thermotolerans CBS 6340]
Length = 481
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Query: 21 VVYMWG----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
VVY WG Y G + L + R G D K + G + A + G+L +WG
Sbjct: 240 VVYAWGNGQQYQLGRKIMERSRLRTLDPRAFGLDKVKYIATGE-NHSFALTRDGRLYSWG 298
Query: 77 SADDEGQ----SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ GQ + G P LP V +AG H + +TE GE+YT+G +
Sbjct: 299 -LNQFGQCGVSEEVDDGALVTVPTEVLLPEGTRVKMVSAGEHHSMVLTEEGELYTFGRLD 357
Query: 133 C----VPSAKV 139
+P AK+
Sbjct: 358 MFEIGIPKAKL 368
>gi|326680004|ref|XP_003201430.1| PREDICTED: RCC1 domain-containing protein 1-like [Danio rerio]
Length = 409
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 66/174 (37%), Gaps = 42/174 (24%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G AL + G L +WGS G LTS E P+ + AAG H
Sbjct: 194 GSEHALLLTADGTLYSWGSGSHGQLGHGVLTSL---EDPQAVEALWGVPIKAVAAGNWHS 250
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V+ G++Y WGW E Q LP+ G E
Sbjct: 251 AAVSSGGDLYMWGWNE----------------------SGQLGLPSR---------GLEE 279
Query: 177 VKRRKTSSAREE----SENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHT 224
KRR S ++ ++ + D F ++ P LV + +I++++ G RHT
Sbjct: 280 EKRRGNGSGNDDQPINTDGKSRTDVFISIQAFPALVDIANMSEISRISCGSRHT 333
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G PE L +P D+ G +LA GK+ WG D GQ L +G
Sbjct: 69 GKQPEPIQALVNLPV---------DLVSCGKEHSLAVCHKGKVFAWGVGSD-GQ--LGTG 116
Query: 90 KHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
K E P+ T +++ + G+ H +++++ G+V++WG
Sbjct: 117 KFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWG 159
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPLPTEASVVKAAAGWAHCV 117
G F+ A +E+G+L TWGS EGQ+ L GE E P L V + G+ H
Sbjct: 147 GSDFSAAITENGELYTWGSC-GEGQNGL-----GEDTEIPTRLHLHGKVRMVSCGYYHMA 200
Query: 118 SVTEAGEVYTWGWRE 132
VTE G +Y G +E
Sbjct: 201 VVTEDGSLYMCGEKE 215
>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
Length = 345
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 13/136 (9%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCG--GDSWKDVCGGGC 60
G+ E + + E V+ Y GT +S + +P +L G G K + G
Sbjct: 28 GTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---VPKKLEGLSGKKIKSLSYGSG 84
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCV 117
L ++E G + WG G S L +G + P + T VV+ A G H +
Sbjct: 85 PHVLLSTEDGVVYAWG---HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSM 141
Query: 118 SVTEAGEVYTWGWREC 133
++ GEV+ WG+ C
Sbjct: 142 ALAADGEVFAWGYNNC 157
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 83/240 (34%), Gaps = 45/240 (18%)
Query: 18 KETVVYMWGY-------LPG---TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATS 67
K+ +Y+WG LP + E P+ P+P G K CGG AL +
Sbjct: 120 KDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSF 179
Query: 68 ESGKLITWGSADD-------------EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
G++ WG D E +S + + + P VV+ A G
Sbjct: 180 --GRVYVWGRGDSGQLGIGSVWMKDPENESLMGASR----PHLLKAFNGEKVVQVACGAF 233
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-- 172
H +VTE G VY WG D+G G Q L P + +
Sbjct: 234 HSAAVTEQGHVYVWG----------KEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCG 283
Query: 173 GEEVVKRRKTSS----AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G V K+ R E GD P LV G + + A GG HTL ++
Sbjct: 284 GWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVT 343
>gi|108756969|ref|YP_633591.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108460849|gb|ABF86034.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 669
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 68/171 (39%), Gaps = 15/171 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G +LA G + WG L G P P +P V+ AAG H V+
Sbjct: 478 GTGHSLALGADGTVWAWGL---NFHGELGDGTTVSRPLPVQVPGLTGVIAVAAGMYHSVA 534
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ G V+ WGW + + G + Q++S + +P + G +
Sbjct: 535 LRNDGTVWAWGW-------NLKGELGDGTTTQRESPVQ---VPGVTGAIAVAAGGYHSLA 584
Query: 179 RRKTSSARE--ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
++ R ++E+ GD T V ++ +T V AGG H+LIL
Sbjct: 585 LLSDNTLRAWGKNEDRQLGDGTNTDRHTAVQVSGLTGVTSVFAGGGHSLIL 635
>gi|389642071|ref|XP_003718668.1| RCC1 domain-containing protein [Magnaporthe oryzae 70-15]
gi|351641221|gb|EHA49084.1| RCC1 domain-containing protein [Magnaporthe oryzae 70-15]
gi|440473847|gb|ELQ42625.1| RCC1 domain-containing protein [Magnaporthe oryzae Y34]
gi|440482532|gb|ELQ63017.1| RCC1 domain-containing protein [Magnaporthe oryzae P131]
Length = 669
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 56 CGGGCGFALATSESGKLITWGSAD------------DEGQSYLTSGKHGETPEPFPLPTE 103
GG +LA ++ G+L+ WG D +E Y K P +P
Sbjct: 533 IAGGEHHSLACTDDGRLLVWGRIDGHQTGLPFDSFTEENAIYDDYKKPRILKTPTVIPGL 592
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+V AAG + ++TE G+VY+WG+
Sbjct: 593 PKIVSVAAGTDNSFAITEDGKVYSWGF 619
>gi|340721975|ref|XP_003399388.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 1
[Bombus terrestris]
Length = 534
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 66/179 (36%), Gaps = 26/179 (14%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGE-----TPEPFPLPTEAS-----VVKAAAG 112
LA +E GK+ +WG HGE T P+P + +V A G
Sbjct: 89 VLALTEEGKVYSWGH-----------NSHGELGNCSTNHMIPMPVTKNLNDEFIVDIACG 137
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+VY WG C K + + + +ST A T + +
Sbjct: 138 SHHSLALTNEGKVYAWGENTCGQVGK-SVNINENTPMKVNST---LAGKTVICISCGQSS 193
Query: 173 GEEVVKRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGK 230
V K + G+ + PC VT+ V I K+ G H L LS K
Sbjct: 194 SMTVTDTGKVYGWGCNDVGQLGIGNYVNQVDPCEVTMLVDVVIKKIVCGYAHVLALSNK 252
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WG G + I P ++ + K V CG ++ +++GK+ WG
Sbjct: 150 VYAWGENTCGQVGKSVNINENTPMKVNSTLAGKTVICISCGQSSSMTVTDTGKVYGWG-C 208
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
+D GQ L G + +P + VV K G+AH ++++ G +Y WG
Sbjct: 209 NDVGQ--LGIGNYVNQVDPCEVTMLVDVVIKKIVCGYAHVLALSNKGALYVWG 259
>gi|440789883|gb|ELR11174.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 360
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 60 CGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG A L G L ++G + G++ SG+ P P P + AA G+ H +
Sbjct: 162 CGRAVTLLLDSEGTLYSFGVSSSLGRADSRSGR----PLPLQFPAGVKIKSAAMGYNHGL 217
Query: 118 SVTEAGEVYTWG 129
++T GEVY+WG
Sbjct: 218 AITTQGEVYSWG 229
>gi|426403877|ref|YP_007022848.1| hypothetical protein Bdt_1894 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425860545|gb|AFY01581.1| hypothetical protein Bdt_1894 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 872
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-----PLPTEASVVKAAAGW 113
G FA +E G++ WG +D+GQ L G + ++ P L +E + A+G
Sbjct: 290 GYDFACGLTEHGRIFCWG-VNDQGQ--LGEGGYTDSATPVLPDWSALSSEPKFIHLASGE 346
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
H VT G +Y WG + +G G D TG SA+P
Sbjct: 347 KHTCGVTVEGLIYCWG----------SNSYGQLG----DGTGDNSAIPV 381
>gi|89130650|gb|AAI14321.1| Wu:fc44f06 protein [Danio rerio]
Length = 388
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 66/174 (37%), Gaps = 42/174 (24%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G AL + G L +WGS G LTS E P+ + AAG H
Sbjct: 173 GSEHALLLTADGTLYSWGSGSHGQLGHGVLTSL---EDPQAVEALWGVPIKAVAAGNWHS 229
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V+ G++Y WGW E Q LP+ G E
Sbjct: 230 AAVSSGGDLYMWGWNE----------------------SGQLGLPSR---------GLEE 258
Query: 177 VKRRKTSSAREE----SENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHT 224
KRR S ++ ++ + D F ++ P LV + +I++++ G RHT
Sbjct: 259 EKRRGNGSGNDDQPINTDGKSRTDVFISIQAFPALVDIANMSEISRISCGSRHT 312
>gi|23271234|gb|AAH38104.1| RCBTB1 protein [Homo sapiens]
Length = 355
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V + G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
>gi|431921464|gb|ELK18834.1| Secretion-regulating guanine nucleotide exchange factor [Pteropus
alecto]
Length = 343
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 43 PARLCGGDSWKDVCG-GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE----- 96
P+R+ G ++ K VC G G + + +++G+L WGS KH +
Sbjct: 203 PSRVTGLENSKAVCVVAGAGHSASVTDAGELYVWGS-----------NKHRQLASQAAFL 251
Query: 97 PFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
P P EA V +GW H V+ TE G+V+TWG
Sbjct: 252 PMPQKIEAHYFQNEKVTAVWSGWTHLVAQTETGKVFTWG 290
>gi|407927258|gb|EKG20156.1| Regulator of chromosome condensation RCC1 [Macrophomina phaseolina
MS6]
Length = 603
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 29/146 (19%)
Query: 22 VYMWGY-------LPGTSPEKSPIL---SPIPARLCGGDSWKDVCGGGCGFALATSESGK 71
V+ WG +P + E ++ +P+PA K++ GGG A A +E GK
Sbjct: 418 VWAWGLNNFGETGIPDNAGEDDAVILKAAPVPA--LSDKKIKNIDGGGHHSA-AVTEDGK 474
Query: 72 LITWGSAD------------DEGQSYLTSGKHGETPEPFPLPTEASVVKA---AAGWAHC 116
+ WG D G+ + +H + P +PTE + A + G H
Sbjct: 475 CLVWGRLDGYQMGLPMDTLKSMGEDKIKKDEH-DRPRILKVPTEIPNINADFVSCGHDHN 533
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRD 142
+++++ G+ Y+WG+ + + T D
Sbjct: 534 IAISKEGKAYSWGFSANYQTGQGTDD 559
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 26/154 (16%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE-- 81
++G+ + +K+P+L P ++ VCG LA G + WGS
Sbjct: 322 IFGFSKDSFIQKTPVLIPQLKKI-----RNVVCG--ANHVLALDADGNVFAWGSGQQNQL 374
Query: 82 GQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
G+ + K G P F LP + + A G H +V + G+V+ WG
Sbjct: 375 GRRVVERTKTEGLVPREFGLPRR-KIAQIACGSYHSFAVEKTGKVWAWGL---------- 423
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPP---SDKR 171
+FG G D+ G+ A+ + AP SDK+
Sbjct: 424 NNFGETGI--PDNAGEDDAVILKAAPVPALSDKK 455
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 40.8 bits (94), Expect = 0.53, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 16/82 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE--PFPLP------TEASVVKAA 110
G +LA + G+L +WGS +G+ G + +P P +VV+ +
Sbjct: 97 GLSHSLALTNWGQLFSWGSN--------ATGQLGHDLDMVSYPAPRMIKSIATKTVVQIS 148
Query: 111 AGWAHCVSVTEAGEVYTWGWRE 132
G +HC+++T +GE++ WG E
Sbjct: 149 CGHSHCLALTNSGELFAWGANE 170
>gi|301111610|ref|XP_002904884.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262095214|gb|EEY53266.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 527
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 11/78 (14%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVKAAA 111
CGG + A + +G++ TWG DD+G G+ G+ P + P +A+ V+
Sbjct: 151 CGGL--HSAAITSAGEVFTWG-CDDDG----ALGRVGDENIPTKVTGFGPQQATAVQVVG 203
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H VT AG+VYTWG
Sbjct: 204 GDCHTAVVTLAGKVYTWG 221
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT----EASVVKAAAGWAHCVSVTEA 122
+ +G+++T+GS D GQ K + FPL + +V+ A G H ++T A
Sbjct: 104 AHAGQMLTFGSGD-CGQLGHGVEKDKDLMVEFPLVVRPLVKLEIVRVACGGLHSAAITSA 162
Query: 123 GEVYTWG 129
GEV+TWG
Sbjct: 163 GEVFTWG 169
>gi|145354795|ref|XP_001421661.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581899|gb|ABO99954.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 160
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFP-----LPTEASVVKAAAGWAHC 116
ALA ESG + WG A D L G+ G+ FP + VV+ +AG AH
Sbjct: 15 ALAVDESGSVYAWGCARD---GVLGFGRERGDEAVVFPTLVRSFGCDVRVVRVSAGLAHS 71
Query: 117 VSVTEAGEVYTWG 129
T+A E +TWG
Sbjct: 72 AVTTDAFETFTWG 84
>gi|395859038|ref|XP_003801853.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Otolemur garnettii]
Length = 479
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 49/128 (38%), Gaps = 3/128 (2%)
Query: 5 GSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA- 63
G EE ++ VY WG + + RL G + CG A
Sbjct: 39 GGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAH 98
Query: 64 -LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+ S++G + WG GQ + S + P V K A G AH VTE+
Sbjct: 99 TVVVSKAGLVFAWGWGH-FGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTES 157
Query: 123 GEVYTWGW 130
G VYTWGW
Sbjct: 158 GHVYTWGW 165
>gi|307190587|gb|EFN74569.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 967
Score = 40.8 bits (94), Expect = 0.54, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K+V CG F + ++ ++ WG+ D S + S K+ P + +VK A
Sbjct: 841 KNVVYIACGPSFNIVITDKNEIYGWGNNDSCQISTVQSDKYYRCPRKI-ITISNKIVKLA 899
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G H +++T GE+Y WG
Sbjct: 900 CGSDHTLALTNEGEIYAWG 918
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S IP R+ G ++ + + G LA E+G L W
Sbjct: 167 REGHVWSWGQPWPPGDIKQIS-----IPVRVQGLENVRLIAVGAF-HNLALEENGTLWAW 220
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ Y G P P+P + ++V AAG H ++T+ GEVY WG
Sbjct: 221 GN-----NEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWG 273
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 29/70 (41%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G L TWG + K P +V+AA G HC++V +
Sbjct: 50 SLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQ 109
Query: 123 GEVYTWGWRE 132
G Y WG E
Sbjct: 110 GRAYAWGGNE 119
>gi|388517305|gb|AFK46714.1| unknown [Lotus japonicus]
Length = 198
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + GKL TWG + K P + +V+AA G HC++V +
Sbjct: 50 SLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALSHVKIVQAAIGGWHCLAVDDQ 109
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGS--FQKDSTG----KQSALPTEQAP 166
G Y WG E +G G +KD TG + +P AP
Sbjct: 110 GRAYAWGGNE----------YGQCGEEPERKDDTGRPLRRDIVIPQRCAP 149
>gi|383864560|ref|XP_003707746.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Megachile rotundata]
Length = 443
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 20/128 (15%)
Query: 14 MEECKETVVYMWGY-----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
+ E E + WG L E P S + L G K C C LA S+
Sbjct: 223 LTESGEVYTFGWGADGQTGLAHYRNEYRP--SLVKGDLAGQHIIKVACIADC--VLALSD 278
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETP------EPFPLPTEASVVKAAAGWAHCVSVTEA 122
GK+ WG+++ GQ + HGE E L V A+G C+ + A
Sbjct: 279 KGKVFGWGNSE-YGQLF----THGENQQVNIATELTALEDVGHVKDIASGGCFCMVLNSA 333
Query: 123 GEVYTWGW 130
G+VY WG+
Sbjct: 334 GDVYVWGY 341
>gi|326680006|ref|XP_003201431.1| PREDICTED: RCC1 domain-containing protein 1 [Danio rerio]
Length = 410
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 66/174 (37%), Gaps = 42/174 (24%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G AL + G L +WGS G LTS E P+ + AAG H
Sbjct: 195 GSEHALLLTADGTLYSWGSGSHGQLGHGALTSL---EDPQAVEALWGVPIKAVAAGNWHS 251
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V+ G++Y WGW E Q LP+ G E
Sbjct: 252 AAVSSGGDLYMWGWNE----------------------SGQLGLPSR---------GLEE 280
Query: 177 VKRRKTSSAREE----SENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHT 224
KRR S ++ ++ + D F ++ P LV + +I++++ G RHT
Sbjct: 281 EKRRGNGSGNDDQPMNTDEKSQTDVFISIQAFPALVDIANMSEISRISCGSRHT 334
>gi|126631716|gb|AAI33847.1| Wu:fc44f06 protein [Danio rerio]
Length = 389
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 66/174 (37%), Gaps = 42/174 (24%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G AL + G L +WGS G LTS E P+ + AAG H
Sbjct: 174 GSEHALLLTADGTLYSWGSGSHGQLGHGALTSL---EDPQAVEALWGVPIKAVAAGNWHS 230
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V+ G++Y WGW E Q LP+ G E
Sbjct: 231 AAVSSGGDLYMWGWNE----------------------SGQLGLPSR---------GLEE 259
Query: 177 VKRRKTSSAREE----SENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHT 224
KRR S ++ ++ + D F ++ P LV + +I++++ G RHT
Sbjct: 260 EKRRGNGSGNDDQPINTDEKSQTDVFISIQAFPALVDIANMSEISRISCGSRHT 313
>gi|71405655|ref|XP_805429.1| regulator of chromosome condensation [Trypanosoma cruzi strain CL
Brener]
gi|70868833|gb|EAN83578.1| regulator of chromosome condensation, putative [Trypanosoma cruzi]
Length = 1099
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 24/126 (19%)
Query: 22 VYMWG-------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
+Y WG LP + P++ +P + + + CG FA GK+
Sbjct: 431 MYFWGGNGCGQCLLPKSKTVSRPVMVDVP------NEYGQIKEVACGSVFAAVLFSDGKI 484
Query: 73 ITWGSADDEGQSY----LTSGKHGETPEPFPL-----PTEASVVKAAAGWAHCVSVTEAG 123
WG G+++ L + G + L P E +V AG HC+++T AG
Sbjct: 485 GMWGKDSMLGETFSSEKLCDTETGTGTKCAKLTIVSKPIEGEIVALRAGPFHCIAITSAG 544
Query: 124 EVYTWG 129
Y+WG
Sbjct: 545 HAYSWG 550
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 52 WKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
W++V CG FA+A ++ G++ TWG + G + + P L VV
Sbjct: 834 WREVTQVACGGTFAVALTQDGEVYTWGESLYCGHPRVVAPC---LTTPMLLEGLKDVVAV 890
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
AAG +H V+++ +Y WG
Sbjct: 891 AAGVSHAVALSYDHRIYAWG 910
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|390353470|ref|XP_790089.3| PREDICTED: alsin-like [Strongylocentrotus purpuratus]
Length = 877
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
T KH TP + S+V+ AG +HCV+++ G+VYTWG
Sbjct: 503 TLDKH--TPNTIKQLSSKSIVRIVAGASHCVAISSNGQVYTWG 543
>gi|358372284|dbj|GAA88888.1| pheromone response protein [Aspergillus kawachii IFO 4308]
Length = 657
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 16/90 (17%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEG---------QSYLTSGKHGETPEPFPLPT--- 102
+CGG ++A +E GK ++WG D++ + L +HG P +PT
Sbjct: 386 ICGGK-DHSVAVTEDGKCLSWGRVDNKALGIPLADMPEEELVHDEHGR-PRILTVPTPLT 443
Query: 103 --EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ VV A A H ++T+ G+ Y+WG+
Sbjct: 444 DIKEEVVFATASSDHSFAITKDGQAYSWGF 473
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 18 KETVVYMWG----------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATS 67
+E VY WG + P T ++ P+L P G G LA +
Sbjct: 231 QEGRVYGWGTFRGSNGVIGFSPETKIQRQPVLVP-------GLEKVTQLASGAQHVLALT 283
Query: 68 ESGKLITWGSADDEGQSYLTSGK-HGETPEPFP----LPTEASVVKAAAGWAHCVSVTEA 122
G ++TWG + SG+ HG+ P LP++ VV G H +V +
Sbjct: 284 AKGAVLTWGCEEQNQLGRRISGRLHGKLESLIPGQCALPSD--VVSIGTGSYHSFAVRKN 341
Query: 123 GEVYTWG 129
G V+ WG
Sbjct: 342 GRVHAWG 348
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 40.8 bits (94), Expect = 0.56, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 21/105 (20%)
Query: 33 PEKSPILSP------IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD--DEGQS 84
P K P+L P + A CG ++A +E G++++WG D GQS
Sbjct: 73 PTKRPLLIPELQNYVVVAIACGSRH-----------SMALTEWGQVLSWGDNDCGQLGQS 121
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
T E P+ VV+ A G H +++T GE+Y+WG
Sbjct: 122 --TDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWG 164
>gi|91083383|ref|XP_967337.1| PREDICTED: similar to Sergef protein [Tribolium castaneum]
gi|270006903|gb|EFA03351.1| hypothetical protein TcasGA2_TC013336 [Tribolium castaneum]
Length = 364
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A S+SG++ TWG SY G E T +P +P V + + G H ++VT+ G
Sbjct: 262 ALSKSGEVFTWGR-----NSYGQLGAQREVTYKPEKIPGLKDVTQLSVGSEHNLAVTKDG 316
Query: 124 EVYTWGWRE 132
+++ WGW E
Sbjct: 317 KLFVWGWNE 325
>gi|408500685|ref|YP_006864604.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465509|gb|AFU71038.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1231
Score = 40.8 bits (94), Expect = 0.57, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
+P T+P K+P +P G + G +LA G L +WG D+ T
Sbjct: 219 IPATAPSKAPEGTPGLVTPPTGVHFTQT-SAGMSLSLAMGSDGNLYSWGLNDNGQLGRST 277
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
+ + P PT + AG++ +++ G +Y+WG ++ RD GSA
Sbjct: 278 TITPADRPGLVTPPTGVHFTQFTAGYSQSLAIGSDGNLYSWGDNS---RGQLGRDTGSA- 333
Query: 148 SFQKDSTGKQSALPT 162
D+T + ++PT
Sbjct: 334 --TYDATPGRVSMPT 346
>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
Length = 531
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Anolis carolinensis]
Length = 4963
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 467 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 521
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 522 YRHSAAVTEDGELYTWG 538
>gi|297828852|ref|XP_002882308.1| ankyrin repeat family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328148|gb|EFH58567.1| ankyrin repeat family protein [Arabidopsis lyrata subsp. lyrata]
Length = 1081
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 22 VYMWGYLPGT---SPE------KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
VY WG+ G PE ++ +++P G + +E G +
Sbjct: 207 VYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDV 266
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TWGS + EGQ TS TP +A +V +A H V+E GEV+TWG
Sbjct: 267 YTWGS-NREGQLGYTSVDTQATPRKVT-SLKAKIVAVSAANKHTAVVSECGEVFTWG 321
>gi|402894100|ref|XP_003910210.1| PREDICTED: uncharacterized protein LOC101008912 [Papio anubis]
Length = 878
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 43 PARLCGGDSWKDVCG-GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE----- 96
P+R+ G ++ K +C G + + +++G++ WGS KHG+
Sbjct: 630 PSRVTGLENSKAMCVLAGADHSASLTDAGEVYVWGS-----------NKHGQLATEAAFL 678
Query: 97 PFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
P P EA V +GW H V+ TE G+V+TWG
Sbjct: 679 PVPQKIEAHCFQNEKVTAVWSGWTHLVAQTETGKVFTWG 717
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHC 116
G LA +E G++ WGS + GQ L + P P + + A+ VV+ A G +H
Sbjct: 92 GAQHTLAQNEWGEVFAWGS-NSNGQLGLNV-EESMMPTPKMVKSLATKQVVQIACGRSHS 149
Query: 117 VSVTEAGEVYTWG 129
+++T GE+Y WG
Sbjct: 150 MALTNVGEIYCWG 162
>gi|302663734|ref|XP_003023505.1| hypothetical protein TRV_02355 [Trichophyton verrucosum HKI 0517]
gi|291187507|gb|EFE42887.1| hypothetical protein TRV_02355 [Trichophyton verrucosum HKI 0517]
Length = 490
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
S I+ P A + G K + GG ++ ++ G+ + WG D S H + P
Sbjct: 332 STIVRPQKATMLIGQKMK-MIQGGRHHSIGITQDGQCLVWGRMDGAQMGIDHSTLHLDDP 390
Query: 96 --------------EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
EP PLP + AAAG H V +T G+ YTWG
Sbjct: 391 QIVISERGKPRILLEPTPLPI-PNCAFAAAGSDHNVLITSEGKAYTWG 437
>gi|302509916|ref|XP_003016918.1| hypothetical protein ARB_05212 [Arthroderma benhamiae CBS 112371]
gi|291180488|gb|EFE36273.1| hypothetical protein ARB_05212 [Arthroderma benhamiae CBS 112371]
Length = 488
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
S I+ P A + G K + GG ++ ++ G+ + WG D S H + P
Sbjct: 329 STIVRPQKATMLIGQKLK-MIQGGRHHSIGITQDGQCLVWGRMDGAQMGIDHSTLHLDDP 387
Query: 96 --------------EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
EP PLP + AAAG H V +T G+ YTWG
Sbjct: 388 HIVISERGKPRILLEPTPLPI-PNCAFAAAGSDHNVLITSEGKAYTWG 434
>gi|445493754|ref|ZP_21460798.1| hypothetical protein Jab_1c00440 [Janthinobacterium sp. HH01]
gi|444789915|gb|ELX11462.1| hypothetical protein Jab_1c00440 [Janthinobacterium sp. HH01]
Length = 471
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGG-DSWKDVCGGGCGFALATSESGKLITWGSAD 79
+Y WG + G + + I P + GG SWK V G FA+A G L WG
Sbjct: 144 LYSWGENIKGQLGDSTTINRSAPVLVSGGGTSWKQVALGDQ-FAVAIRTDGTLWAWGYNQ 202
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D GQ L G P + + AAG AH ++V +G +Y WG
Sbjct: 203 D-GQ--LGDGTQINRTAPTQIGKDKDWNLVAAGKAHALAVKTSGALYAWG 249
>gi|66358878|ref|XP_626617.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
gi|46228329|gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
Length = 1878
Score = 40.8 bits (94), Expect = 0.59, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-SVVKAAAGWAHCV 117
G L + SG+LITWG A G+ S K P P + +V A G H +
Sbjct: 673 GSSHTLVLTASGELITWG-AGYYGRLGTNSTKSHSNPIKIRFPIKGVQIVDIAVGSYHSM 731
Query: 118 SVTEAGEVYTWGWRECVPSAK 138
+V+ G+++ WG E V S K
Sbjct: 732 AVSSLGDLWVWGKAENVLSEK 752
Score = 40.0 bits (92), Expect = 0.97, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPFPL---PTEASVVKAAAGWA 114
G +LA S+SG + WG GQ L +G+ + P + PT+ V+ AAG
Sbjct: 174 GANHSLALSDSGLVFAWGI----GQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGAR 229
Query: 115 HCVSVTEAGEVYTWG 129
H + E G+V+ WG
Sbjct: 230 HSLCCNEDGQVFAWG 244
>gi|350580248|ref|XP_003122992.3| PREDICTED: secretion-regulating guanine nucleotide exchange factor
isoform 1 [Sus scrofa]
Length = 458
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 23/99 (23%)
Query: 43 PARLCGGDSWKDVCG-GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE----- 96
P+++ G ++ + VC G G + + +++G+L WGS KHG+
Sbjct: 203 PSKVTGLENSQAVCVLAGSGHSASLTDAGELYVWGS-----------NKHGQLASQAAFL 251
Query: 97 PFPLPTEA------SVVKAAAGWAHCVSVTEAGEVYTWG 129
P P EA V +GW H V+ TE G+V+TWG
Sbjct: 252 PLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWG 290
>gi|350408000|ref|XP_003488267.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 534
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WG G + I P ++ + K V CG ++ +++GK+ WG
Sbjct: 150 VYAWGENTSGQVGKSVNINENTPMKVNSSLAGKTVICISCGQSSSMTVTDTGKVYGWG-C 208
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
+D GQ L G + +P + A VV K G+AH ++++ G +Y WG
Sbjct: 209 NDVGQ--LGIGNYVNQVDPCKVTMLAGVVIEKIVCGYAHVLALSNKGALYVWG 259
>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
Length = 833
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----VVKA-AAG 112
G G LA + G++ +WG D Y G + + +P + + VVK+ +AG
Sbjct: 470 GSDGHTLALTADGEVFSWGDGD-----YGKLGHGNSSTQKYPKQIQGALQGKVVKSISAG 524
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE++TWG
Sbjct: 525 YRHSAAVTEDGELFTWG 541
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
[Oxytricha trifallax]
Length = 2049
Score = 40.8 bits (94), Expect = 0.60, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
GD+ + G ++A ++S +L WGS G + + K P ++ ++
Sbjct: 1668 GDNSPQILSAGYEHSIAITKSNELYIWGSG---GLCGIGTLKQQNAPVKIDFFNKSKILT 1724
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRE 132
A G H V+VT+ E Y+WG E
Sbjct: 1725 AVCGGLHTVAVTKDWEAYSWGLTE 1748
>gi|356495400|ref|XP_003516566.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 432
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 30/193 (15%)
Query: 43 PARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEP 97
P R+ G +VCG + A + G + WG + GQ L G+H P
Sbjct: 100 PERVKGLLENVNVCGAFASGVVSAALGDDGSVWVWGKSK-RGQ--LGLGQHITEAVVPTK 156
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ +V K A GW H ++ T G+++ WG + + G K
Sbjct: 157 LEALSRENVAKVAFGWGHALARTSDGKLFGWG-------------YSADGRIGKMGNNHF 203
Query: 158 SALPTEQAPPSDKR---AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
P E P++ + + E ++R +E+ P P LV GV +
Sbjct: 204 QTSPLESESPNNSQLSTSDLEAAEKRVLQGIEQENNMP------IVWEPRLVEELRGVHV 257
Query: 215 TKVAAGGRHTLIL 227
+A G H+L+L
Sbjct: 258 LDIACGLDHSLVL 270
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 40.8 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAH 115
CG ++A E G+ +WGS D GQ G H + P+ +V++ A G H
Sbjct: 94 ACGLQHSMALDEWGQPFSWGS-DSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYH 152
Query: 116 CVSVTEAGEVYTWG 129
V +T G++Y WG
Sbjct: 153 TVVLTNNGDLYAWG 166
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 40.8 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P P PL E +K + GW H ++E+GE++TWG
Sbjct: 1210 PMP-PLKNEKRAIKVSCGWDHVALISESGELFTWG 1243
>gi|355715920|gb|AES05445.1| regulator of chromosome condensation and BTB domain containing
protein 1 [Mustela putorius furo]
Length = 143
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 29 VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 87
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 88 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 138
>gi|357464831|ref|XP_003602697.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
truncatula]
gi|355491745|gb|AES72948.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
truncatula]
Length = 244
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 26/134 (19%)
Query: 28 LPGTSPEKSP-ILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL 86
L GTS P ++S +P ++V GG + T+ G+L TWGS ++ G +
Sbjct: 93 LKGTSNTTKPSLISELPYA-------EEVACGGYHTCVLTN-FGELYTWGS-NENGCLGI 143
Query: 87 TSGKHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
S PE P E+SVV+ + GW H +++ G ++TWGW GS
Sbjct: 144 GSSYAIHLPEKVQGPFLESSVVQVSCGWKHTAAIS-GGRIFTWGWG------------GS 190
Query: 146 AGSFQKD--STGKQ 157
G+F D S+G Q
Sbjct: 191 NGTFSDDGHSSGGQ 204
>gi|299115875|emb|CBN74438.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 2018
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYL------TSGKHGETPEPFPLPTEAS---- 105
CGGG F LA + GK+ WGS G+ L T G+ + P P + S
Sbjct: 1113 CGGG--FTLAVTNGGKVFAWGSWA-RGRLGLGRPPERTIGRKKKVPRFQGTPRKVSGLGR 1169
Query: 106 --VVKAAAGWAHCVSVTEAGEVYTWG 129
V+ AAG H +++TE GEV+TWG
Sbjct: 1170 SPAVQVAAGAWHGMALTEDGEVFTWG 1195
>gi|330831846|ref|XP_003291966.1| hypothetical protein DICPUDRAFT_156630 [Dictyostelium purpureum]
gi|325077826|gb|EGC31514.1| hypothetical protein DICPUDRAFT_156630 [Dictyostelium purpureum]
Length = 1052
Score = 40.8 bits (94), Expect = 0.62, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG F A ++G + WG+ + G++ FPL +V A G+ H +
Sbjct: 201 CGRYFITALDKNGLVWNWGAKHEPNSC-------GQSTPLFPLRFRGNVKSIATGFHHSL 253
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRD 142
++T+ G+VY WG + +TRD
Sbjct: 254 ALTDNGDVYGWGSNNFGCLSNITRD 278
>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
Length = 938
Score = 40.8 bits (94), Expect = 0.62, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
TSP++ L IP + GG FAL S SG + WG ++ GQ L+ K
Sbjct: 69 TSPQRVRSLEGIPLA-------QVAAGGAHSFAL--SLSGAVFGWG-MNNAGQLGLSDEK 118
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
E+P L VV + G H +T++G V+T+G C
Sbjct: 119 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 161
>gi|330793315|ref|XP_003284730.1| hypothetical protein DICPUDRAFT_75704 [Dictyostelium purpureum]
gi|325085330|gb|EGC38739.1| hypothetical protein DICPUDRAFT_75704 [Dictyostelium purpureum]
Length = 1047
Score = 40.4 bits (93), Expect = 0.62, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG F A ++G + WG A E SY +TP FP + +V A G+ H +
Sbjct: 201 CGRYFITALDKNGLVWNWG-AKHEPNSY-----RQKTPL-FPHKFKGNVKSIATGFHHSL 253
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
++T+ G+VY WG + +TRD G+F S KQ +P
Sbjct: 254 ALTDKGDVYGWGSNSFGCLSNITRD----GTFS--SKIKQIEMP 291
>gi|319943960|ref|ZP_08018240.1| RCC1 repeat domain protein [Lautropia mirabilis ATCC 51599]
gi|319742721|gb|EFV95128.1| RCC1 repeat domain protein [Lautropia mirabilis ATCC 51599]
Length = 461
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+P G ++ V GG ALA G L WG D+ L G+ TP+ P
Sbjct: 185 PLP-----GHDYQAVAVGGA-HALALDRQGNLWGWG---DDRHGQLGRGRVNHTPQDRPT 235
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+V AAG H ++V + G + WG
Sbjct: 236 RIARDIVAIAAGDRHSLAVRKDGALLAWG 264
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG LA + G++ +WG + GQ L + + P+ S+ AAG H
Sbjct: 130 CGDSHCLAVTMDGEVQSWGR-NQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTA 188
Query: 118 SVTEAGEVYTWGW 130
+VTE GE+Y WGW
Sbjct: 189 AVTEDGELYGWGW 201
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G+L WG G L PE L ++ A GW H +SV+ +G
Sbjct: 189 AVTEDGELYGWGWGR-YGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGG 247
Query: 125 VYTWGW 130
+YT+GW
Sbjct: 248 LYTYGW 253
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVV 107
DS+ + GG +A + G L WG + GQ + +P P E S+V
Sbjct: 278 DSYISMISGGWRHTMALTSDGNLYGWG-WNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLV 336
Query: 108 KAAAGWAHCVSVTEAGEVYTWG 129
+ + GW H +++TE V++WG
Sbjct: 337 QISCGWRHTLAITERQNVFSWG 358
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 1 MEMNGSKREENEKMEECKETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGG 59
++M + E + E E + WG Y +++ L P L GD V
Sbjct: 177 IKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVA--- 233
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ ++ S SG L T+G + GQ + TP ++ + + GW H +
Sbjct: 234 CGWRHTISVSSSGGLYTYGWSK-YGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTM 292
Query: 118 SVTEAGEVYTWGWRE 132
++T G +Y WGW +
Sbjct: 293 ALTSDGNLYGWGWNK 307
>gi|431891177|gb|ELK02054.1| Regulator of chromosome condensation [Pteropus alecto]
Length = 471
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
K P L PIP + ++ G + S+SG++ ++G +DEG + G
Sbjct: 107 RKKPALVPIPEDIVQAEA-------GGMHTVCLSKSGQVYSFG-CNDEGALGRDTSVEGS 158
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + + +VV+ +AG +H ++TE G V+ WG
Sbjct: 159 EMVPGKVELQENVVQVSAGDSHTAALTEDGRVFLWG 194
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + VVK A+G H V +T G+
Sbjct: 183 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGD 242
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 243 LYTLGCGEQGQLGRVPELFANRGGRQ 268
>gi|194750136|ref|XP_001957486.1| GF10433 [Drosophila ananassae]
gi|190624768|gb|EDV40292.1| GF10433 [Drosophila ananassae]
Length = 477
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
DVC GG L +++G++ ++G +DEG + + G +P + V +AG
Sbjct: 76 DVCAGGM-HNLVLTKNGEIYSFG-CNDEGALGRDTSEEGSEAQPGKIDLPKKAVSVSAGD 133
Query: 114 AHCVSVTEAGEVYTWG-WRECVPSAKVTRD 142
+H + E G VY WG +R+ + +T D
Sbjct: 134 SHSACLMEDGSVYAWGSFRDSHGNMGLTMD 163
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 40.4 bits (93), Expect = 0.63, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P K P+L P L + CG ++A SE G++++WG D T
Sbjct: 77 PTKRPLLIP---ELLDYVVVQIACGSR--HSMALSEWGQVLSWGDNDCGQLGQATDQDIV 131
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P+ +VV+ A G H +++T GE+Y+WG
Sbjct: 132 QLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWG 168
>gi|148698159|gb|EDL30106.1| regulator of chromosome condensation 1, isoform CRA_a [Mus
musculus]
Length = 429
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + +A VVK A+G H V +T G+
Sbjct: 141 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGD 200
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 201 LYTLGCGEQGQLGRVPELFANRGGRQ 226
>gi|66363246|ref|XP_628589.1| myosin'unconventional myosin fused to an RCC1 domain (unique)'
[Cryptosporidium parvum Iowa II]
gi|46229596|gb|EAK90414.1| myosin'unconventional myosin fused to an RCC1 domain (unique)'
[Cryptosporidium parvum Iowa II]
Length = 1660
Score = 40.4 bits (93), Expect = 0.63, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPT---EASVVKAAAGWA 114
G LA SE G + WG A++ GQ + ++ TP LP + + A AG
Sbjct: 1203 GVDHTLALSEVGSVYCWG-ANEYGQCGCDATEYQISTPTLISLPADWKQTRITLARAGAF 1261
Query: 115 HCVSVTEAGEVYTWG 129
HCV+VT EV WG
Sbjct: 1262 HCVAVTIENEVLVWG 1276
>gi|428171592|gb|EKX40507.1| hypothetical protein GUITHDRAFT_96261, partial [Guillardia theta
CCMP2712]
Length = 424
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 7 KREENEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
K + + + +++ WG GT + + P P + + V GG
Sbjct: 183 KLTNHHTLALSRSGILFAWGINHMGQLGTG-DTADRFQPTPTKNSKDLLFFQVSAGG-EH 240
Query: 63 ALATSESGKLITWGSAD--DEGQSYLTSGKHGETP----EPFPLP--TEASVVKAAAGWA 114
++A + GK+ WGS GQ L G + P E +P + +V+ AAGW
Sbjct: 241 SMAVTSLGKVYVWGSGSSGQLGQDSLDIGPNSVEPRRSLEAILVPGLKDQFIVQVAAGWL 300
Query: 115 HCVSVTEAGEVYTWG 129
H +++++ GE++ WG
Sbjct: 301 HSIALSKDGEIWIWG 315
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 70/186 (37%), Gaps = 27/186 (14%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
D+ G A+ TS G L TWG ++ + + H TP+ + VV+ +A
Sbjct: 115 DIACGSRHTAIVTSR-GCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACG 173
Query: 114 AHCVSVTEAGEVYTWG-----------WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
H +T+AGEVYTWG R C S ++ Q G SA+ T
Sbjct: 174 FHTGCLTDAGEVYTWGEGKFGRLGHGAERNC-HSPRLVETLLGKRPVQISCGGFHSAVVT 232
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
GE GD+ + P LV GV +T++ G
Sbjct: 233 ADGKMYTFGGGEH--------------GQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWS 278
Query: 223 HTLILS 228
H++ L+
Sbjct: 279 HSVALT 284
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 40.4 bits (93), Expect = 0.64, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|302834503|ref|XP_002948814.1| hypothetical protein VOLCADRAFT_58528 [Volvox carteri f.
nagariensis]
gi|300266005|gb|EFJ50194.1| hypothetical protein VOLCADRAFT_58528 [Volvox carteri f.
nagariensis]
Length = 194
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 21/132 (15%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
+VV A G H +++T+ G V WG E +G GS S G P
Sbjct: 45 NVVAAGCGATHTLALTDQGAVLGWGGNE----------YGQTGS---GSEGADQHQPRHI 91
Query: 165 APPSDKR---AGEE-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+D+R AGE R + R + GD P LVT G++ +
Sbjct: 92 KGLADQRVVAAGENHSAALTADGRLYTWGRGKHGQLGQGDWANRHRPVLVTSLRGIRAKQ 151
Query: 217 VAAGGRHTLILS 228
V+AG RH+L+L+
Sbjct: 152 VSAGSRHSLVLT 163
>gi|148698161|gb|EDL30108.1| regulator of chromosome condensation 1, isoform CRA_c [Mus
musculus]
Length = 504
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + +A VVK A+G H V +T G+
Sbjct: 216 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGD 275
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 276 LYTLGCGEQGQLGRVPELFANRGGRQ 301
>gi|428184753|gb|EKX53607.1| hypothetical protein GUITHDRAFT_160884 [Guillardia theta CCMP2712]
Length = 308
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P + PI P+ CG F + +ESGK+ + G + +G
Sbjct: 128 PTEIPIPEPVIDVSCGKK-----------FTVFVTESGKVYSMGDNKNGELGNPNAGSSS 176
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
P +VK AAG H +++++ GEVY+WGW
Sbjct: 177 YEPTIVHGLDGIKIVKIAAGQYHVLALSDIGEVYSWGW 214
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|302846023|ref|XP_002954549.1| hypothetical protein VOLCADRAFT_64836 [Volvox carteri f.
nagariensis]
gi|300260221|gb|EFJ44442.1| hypothetical protein VOLCADRAFT_64836 [Volvox carteri f.
nagariensis]
Length = 208
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTE 121
+A +E G+L +WG +D GQ L G T +P LP VV AAAG ++V +
Sbjct: 51 MAVTEDGELYSWG-LNDWGQ--LGRPAVGATSDPGLVSLPGGVRVVGAAAGRYVSMAVDD 107
Query: 122 AGEVYTWGWRECVPSAKV 139
+G +YTWG C K+
Sbjct: 108 SGRLYTWGHDGCSNGGKL 125
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 25 WGYL--PGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
WG L P P L +P R+ G + + V ++A +SG+L TWG
Sbjct: 67 WGQLGRPAVGATSDPGLVSLPGGVRVVGAAAGRYV-------SMAVDDSGRLYTWG---H 116
Query: 81 EGQSYLTSGKHGETPEPFP-------LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+G S GK E E + L + V AAG H V T G+V+TWG RE
Sbjct: 117 DGCS--NGGKLPERNEAYKPKLVSGELAAKRVVEAVAAGREHAVVSTADGKVFTWGGREL 174
Query: 134 V 134
+
Sbjct: 175 L 175
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|262199857|ref|YP_003271066.1| alpha-tubulin suppressor and related RCC1 domain- containing
protein-like protein [Haliangium ochraceum DSM 14365]
gi|262083204|gb|ACY19173.1| Alpha-tubulin suppressor and related RCC1 domain- containing
protein-like protein [Haliangium ochraceum DSM 14365]
Length = 535
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 71/201 (35%), Gaps = 48/201 (23%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHG--------ETPEPF-PLPTEASVVKAAA 111
G A E+G+++ WG ++ Y +S + G ETP P+ + ++ A
Sbjct: 245 GHTCALLEAGEVVCWGRSEGGALGYPSSPEDGQFLIVGDDETPADVGPVEIGGTAIQVAV 304
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H +V + G++ WG DFG G D G Q A D
Sbjct: 305 GAKHTCAVLDTGKLRCWG----------KGDFGQLGYGNTDDIGDQDT----PASAGDVP 350
Query: 172 AGEEVVKRRKTSS-------------------------AREESENPASGDEFFTLSPCLV 206
G +V++ S N +GDE L
Sbjct: 351 VGGDVIQVAAGGSHTCALLSDGTIKCWGRGNEGQLGYGVTSFGSNEQAGDEIGDTPAELG 410
Query: 207 TLNPGVKITKVAAGGRHTLIL 227
T++ G T++ AGG+HT L
Sbjct: 411 TVDVGGTATQIVAGGKHTCAL 431
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 40.4 bits (93), Expect = 0.66, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|74213820|dbj|BAE29345.1| unnamed protein product [Mus musculus]
Length = 421
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + +A VVK A+G H V +T G+
Sbjct: 133 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGD 192
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQ 218
>gi|408400628|gb|EKJ79706.1| hypothetical protein FPSE_00160 [Fusarium pseudograminearum CS3096]
Length = 362
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 16/81 (19%)
Query: 52 WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
WKDV G G ++ G L WG DD GQ P P + K A
Sbjct: 249 WKDV-GASWGNIFILAKDGSLQAWGR-DDHGQ--------------LPPPNLPELSKIAI 292
Query: 112 GWAHCVSVTEAGEVYTWGWRE 132
G H V+++ AG+V +WGW E
Sbjct: 293 GSEHVVALSTAGDVLSWGWGE 313
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 40.4 bits (93), Expect = 0.66, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|351703184|gb|EHB06103.1| RCC1 and BTB domain-containing protein 1 [Heterocephalus glaber]
Length = 467
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEEGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P V+ AA + CV+ T+ G VY WG
Sbjct: 208 --NGNGQLGLGNNGNQLTP---------VRVAALHSVCVNQTQGGHVYMWG 247
>gi|169784121|ref|XP_001826522.1| Ran exchange factor Prp20/Pim1 [Aspergillus oryzae RIB40]
gi|238508824|ref|XP_002385595.1| Ran exchange factor Prp20/Pim1, putative [Aspergillus flavus
NRRL3357]
gi|83775267|dbj|BAE65389.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220688487|gb|EED44840.1| Ran exchange factor Prp20/Pim1, putative [Aspergillus flavus
NRRL3357]
gi|391868514|gb|EIT77728.1| RCC1 domain protein [Aspergillus oryzae 3.042]
Length = 523
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAA 111
VCG ALA E G + +WGS G+ + + +G P F LP +++ +
Sbjct: 280 VCGDN--HALALDERGAVFSWGSGQQNQLGRRIIERNRLNGLQPREFGLPK--NIIHVGS 335
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H +V ++G+VY WG
Sbjct: 336 GAFHSFAVHQSGKVYAWG 353
>gi|74139909|dbj|BAE31793.1| unnamed protein product [Mus musculus]
gi|74151827|dbj|BAE29701.1| unnamed protein product [Mus musculus]
Length = 421
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + +A VVK A+G H V +T G+
Sbjct: 133 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGD 192
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQ 218
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 40.4 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|355694495|gb|AER99688.1| hect domain and RLD 4 [Mustela putorius furo]
Length = 181
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 60 CGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG A LA ++ G++ WG D L S + P ++ VV+ A G+ H +
Sbjct: 52 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQVVQVACGYYHSL 111
Query: 118 SVTEAGEVYTWG 129
++++A EV++WG
Sbjct: 112 ALSKASEVFSWG 123
>gi|345316102|ref|XP_001519845.2| PREDICTED: RCC1 domain-containing protein 1-like, partial
[Ornithorhynchus anatinus]
Length = 259
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP E KA+ G H VT +GE+YTWGW
Sbjct: 155 QPFPALLDLPREQEASKASCGSRHTAVVTRSGELYTWGW 193
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 40.4 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|328872877|gb|EGG21244.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 629
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 19/86 (22%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTE-------- 103
K VC C + A S+ G L +WG + L G PF PLPT+
Sbjct: 109 KVVC---CEVSFAISQDGDLYSWGPS-------LLLGYPVLNESPFVPLPTKIVFPSFSP 158
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWG 129
+V + HC ++T+ G+VY WG
Sbjct: 159 VFIVSVSCSLHHCSAITKDGQVYMWG 184
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG + S + P P + G K + CG LA + G+++ WG
Sbjct: 88 VYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIA---CGDSHCLAITTDGEVLGWG 144
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + TP +V AAG H +VTE G++Y WGW
Sbjct: 145 R-NQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGW 197
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 40.4 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|308153287|ref|NP_001184011.1| regulator of chromosome condensation isoform 1 [Mus musculus]
gi|34784343|gb|AAH57645.1| Rcc1 protein [Mus musculus]
Length = 434
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + +A VVK A+G H V +T G+
Sbjct: 146 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGD 205
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 206 LYTLGCGEQGQLGRVPELFANRGGRQ 231
>gi|19112818|ref|NP_596026.1| Ran GDP/GTP exchange factor [Schizosaccharomyces pombe 972h-]
gi|12644186|sp|P28745.2|RCC1_SCHPO RecName: Full=Protein pim1; AltName: Full=Poly(A)+ RNA transport
protein 2
gi|6434004|emb|CAB60670.1| Ran GDP/GTP exchange factor [Schizosaccharomyces pombe]
Length = 539
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 59 GCGFALATSESGKLITWGSADD--EGQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAH 115
G +A + +GK+ TWG+ G+ L + G TP+P L +++ AG H
Sbjct: 234 GTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLAL---KNIISVGAGSYH 290
Query: 116 CVSVTEAGEVYTWGW---REC 133
++ G VY WG R+C
Sbjct: 291 SFAIDNKGRVYAWGLNITRQC 311
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------------PEPFPLPTEAS 105
GG LA E G+++ WG DD Q + ET P +P +
Sbjct: 343 GGEHHTLALLEDGRVLAWGR-DDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTN 401
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRE 132
V++ G H ++VT G+VY+WG E
Sbjct: 402 VIQVVCGTHHNLAVTSDGKVYSWGSAE 428
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGFAL--ATSESGKLITWGS--ADDEGQSYLTSGKHGE 93
+L P+++ G S V C L A +++G TWG+ D Y S K
Sbjct: 159 LLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTA 218
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P LP + + A G H +++T G+VYTWG
Sbjct: 219 EPTQMRLP---EICQLATGTDHIIALTTTGKVYTWG 251
>gi|395815365|ref|XP_003781199.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Otolemur garnettii]
Length = 875
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 43 PARLCGGDSWKDVCG-GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE----- 96
P+R+ G ++ K VC G + + +++G++ WGS KHG+
Sbjct: 620 PSRVTGLENCKAVCVVAGSDHSASLTDAGEVYVWGS-----------NKHGQLATQAAFL 668
Query: 97 PFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
P P EA V +GW H V+ TE G+++TWG
Sbjct: 669 PVPQKIEAHCFQNEKVTAVWSGWTHLVAQTETGKMFTWG 707
>gi|330801577|ref|XP_003288802.1| hypothetical protein DICPUDRAFT_98143 [Dictyostelium purpureum]
gi|325081138|gb|EGC34665.1| hypothetical protein DICPUDRAFT_98143 [Dictyostelium purpureum]
Length = 1093
Score = 40.4 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 22 VYMWGYLPGTSP-EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V++WG G S + IPA+ G +DV C + A S G + WGS
Sbjct: 221 VFVWGNNKGRQICNNSDDIISIPAKPFLG---RDVVELSCSKNYIAARSGVGNVCIWGSN 277
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
D T K GE+ + P + + A+ H ++++E GEV+ WG E P++
Sbjct: 278 D-------TVCKLGESDKWITFPNKIKQISASIN--HLLALSEKGEVFNWGLSETEPTS 327
>gi|322801013|gb|EFZ21794.1| hypothetical protein SINV_09385 [Solenopsis invicta]
Length = 354
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHG 92
+P+L+ IP R+ D CGF + +E+G + + G GQ +
Sbjct: 148 NAPLLAEIPKRVRFVDL-------ACGFDHTILLAENGDVYSMGMGI-RGQLGHNELEDC 199
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
E P+ V++ +AG H +T+ G++YTWGW
Sbjct: 200 ENPKLIEALAGLKVIQISAGGWHSAVITDQGDLYTWGWN 238
>gi|311260691|ref|XP_001927570.2| PREDICTED: RCC1 domain-containing protein 1 [Sus scrofa]
Length = 385
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 65/172 (37%), Gaps = 23/172 (13%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G AL +G++ +WG G L + + E A V AA GW H
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEV--AAGGW-HS 228
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V V+E G++Y WGW E A R G K TG L E+
Sbjct: 229 VCVSETGDIYIWGWNESGQLALPARSLAEDG---KTITGDAPGL------------NEDG 273
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ ++ + + P + F P L+ L G K + G RHT +++
Sbjct: 274 SEAKRATEGEDGGPTPFIAVQPF---PALLDLPLGSDAVKASCGSRHTAVVT 322
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 294 QPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGW 332
>gi|242021219|ref|XP_002431043.1| serine/threonine-protein kinase Nek8, putative [Pediculus humanus
corporis]
gi|212516272|gb|EEB18305.1| serine/threonine-protein kinase Nek8, putative [Pediculus humanus
corporis]
Length = 369
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 65 ATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A + G++ WGS D G LT G+ P L + + K A+G H V +T G
Sbjct: 138 ALLDDGRVFAWGSFRDSHGAMGLTV--QGKEKRPIQLLQDKVITKIASGADHLVMLTFDG 195
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQ 150
++YT G E +V+ F S S Q
Sbjct: 196 QLYTCGCAEQGQLGRVSNRFSSRESRQ 222
>gi|148698160|gb|EDL30107.1| regulator of chromosome condensation 1, isoform CRA_b [Mus
musculus]
Length = 457
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + +A VVK A+G H V +T G+
Sbjct: 169 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGD 228
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 229 LYTLGCGEQGQLGRVPELFANRGGRQ 254
>gi|383319323|ref|YP_005380164.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
gi|379320693|gb|AFC99645.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
Length = 476
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
P + G + KDV G F++A G + TWG + GQ + + G PEP +P
Sbjct: 73 PVMINGLEGVKDVAVGN-NFSMALKSDGTVWTWGD-NRYGQLGIGTADDGRHPEPVQVPG 130
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWG 129
+V+ +A + +++ + G V+ WG
Sbjct: 131 LTNVIAISADFQLAMALKDDGTVWAWG 157
>gi|159038147|ref|YP_001537400.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916982|gb|ABV98409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 68/174 (39%), Gaps = 25/174 (14%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
+T S ++ WG + GQ +G +TP P LP +V AAG H +++T G
Sbjct: 51 STVGSDTVLAWGD-NLFGQLGDGTGADSDTPIPVSLPPGTTVTAIAAGDEHSLALTSTGT 109
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP-TEQAPPSDK-------RAGEEV 176
V WG FG G D T + P T PP R+
Sbjct: 110 VLAWGRNR----------FGQLG----DETNTSRSTPVTVSLPPGTTVTAIAAGRSHSLA 155
Query: 177 VKRRKTSSA--REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ ++ A R S G + P V L PG +T +AAG H+L ++
Sbjct: 156 ITSTGSALAWGRNFSGQLGDGTTNDSNKPVAVNLPPGTTVTAIAAGDGHSLAVT 209
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 40.4 bits (93), Expect = 0.69, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 40.4 bits (93), Expect = 0.69, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|307176968|gb|EFN66274.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Camponotus floridanus]
Length = 1719
Score = 40.4 bits (93), Expect = 0.69, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 22 VYMWGY-LPGTSPEKSPILS-PIPARLCGGDSWK-DVCGGGCGF--ALATSESGKLITWG 76
+Y WG + G S +L P +C S + +V CG LA + +G + WG
Sbjct: 833 IYTWGSSVQGCLGTGSSVLRYGAPHAICFFRSMEVEVFSVSCGHCHTLAVTNNG-IYAWG 891
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
S+ GQ L +PE + ++ A AG H V++T G V+TWGW
Sbjct: 892 SSQ-FGQLGLGKVLQCSSPELIISLAQEIIIDAVAGQYHSVALTADGRVFTWGW 944
>gi|145479297|ref|XP_001425671.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392743|emb|CAK58273.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
AL TS+ G+L TWG+ + GQ + K TP+ T+ + V + A G H V++T
Sbjct: 62 ALITSD-GELYTWGTGN-SGQLGHNNDKDYNTPQLVEFFTKHNLKVKQVALGDYHTVALT 119
Query: 121 EAGEVYTWGW 130
G+V+TWG+
Sbjct: 120 HDGDVWTWGY 129
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+ A E G+L TWG + GQ P P V A G AH V
Sbjct: 169 GVAFSAALMEGGQLYTWG-CNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVV 227
Query: 119 VTEAGEVYTWG 129
+T + +VYTWG
Sbjct: 228 LTTSRDVYTWG 238
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA SGK+ +WG + GQ S H TP V + A G A +
Sbjct: 117 GSDHVLALDASGKIRSWGRGE-SGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAA 175
Query: 119 VTEAGEVYTWG 129
+ E G++YTWG
Sbjct: 176 LMEGGQLYTWG 186
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
VY WG G K L P R+ G K + G + TS G + TWG
Sbjct: 234 VYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTS-FGDIYTWGR 292
Query: 78 AD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
D G + S P T+AS++ + A + +++T +G VY+WG R C
Sbjct: 293 GDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADF--IMAMTYSGAVYSWG-RNC-- 347
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
FG G K + P++ P
Sbjct: 348 -------FGQLGHGVDMHYSKSNRFPSDVISP 372
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 41 PIPARLCGGD----SWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
P+P L G D + +CG A + E +L +WG D HG + +
Sbjct: 61 PVPTLLSGFDVPGIASVVICGADHTTAY-SDEQMQLYSWGWGD------FGRLGHGNSSD 113
Query: 97 PF-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
F P P EA + + A G +HC++VT+AG+V++WG + G + +
Sbjct: 114 VFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQ-------NGQLGLGNT--E 164
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTL 201
DS Q E AG E T++ E+ + N GD L
Sbjct: 165 DSLLPQKIHAFEGVCVKMIAAGAE-----HTAAILEDGDLYGWGWGQYGNLGLGDRNDRL 219
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS 228
P V+ G K+ VA G RHT+ +S
Sbjct: 220 VPEKVSSVEGEKMVLVACGWRHTVTVS 246
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + +P P E V + A GW H +
Sbjct: 289 GGWRHTMAVAGDGKLYGWG-WNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTL 347
Query: 118 SVTEAGEVYTWG 129
++TE V++WG
Sbjct: 348 ALTENKNVFSWG 359
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE 93
S + P P G K + CG LA +++G++ +WG + GQ L + +
Sbjct: 112 SDVFHPQPIEALQGIKIKQIA---CGDSHCLAVTDAGQVHSWGR-NQNGQLGLGNTEDSL 167
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
P+ V AAG H ++ E G++Y WGW
Sbjct: 168 LPQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGW 204
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 62/174 (35%), Gaps = 25/174 (14%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A E G L WG G L PE +V A GW H V+V+ +G+
Sbjct: 192 AILEDGDLYGWGWGQ-YGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGD 250
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D+ + R T +
Sbjct: 251 LYTYGWSK----------YGQLGH----GDFEDHLVPHKLEALKDRFISQIAGGWRHTMA 296
Query: 185 AREESENPASG----------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + G D SP V K+ +VA G RHTL L+
Sbjct: 297 VAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALT 350
>gi|297268307|ref|XP_001083991.2| PREDICTED: tryptophan 5-hydroxylase [Macaca mulatta]
Length = 885
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 43 PARLCGGDSWKDVCG-GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE----- 96
P+R+ G ++ K +C G + + +++G++ WGS KHG+
Sbjct: 630 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGS-----------NKHGQLATEAAFL 678
Query: 97 PFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
P P EA V +GW H V+ TE G+V+TWG
Sbjct: 679 PVPQKIEAHCFQNEKVTAVWSGWTHLVAQTETGKVFTWG 717
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 40.4 bits (93), Expect = 0.71, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F++A +ESG L WG + + G+ E P+ SVV+ A G HC+++TE
Sbjct: 92 FSIAIAESGLLFGWGRSLN-GELMCKQDSLHE-PKLLDKIMHWSVVQVACGAQHCIALTE 149
Query: 122 AGEVYTWG 129
G + +WG
Sbjct: 150 EGTILSWG 157
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 40.4 bits (93), Expect = 0.71, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA + G++ +WGS T P VV+ AAG HC++
Sbjct: 408 GTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLA 467
Query: 119 VTEAGEVYTWG 129
+T +GE+Y WG
Sbjct: 468 LTNSGELYAWG 478
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 40.4 bits (93), Expect = 0.71, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVT 120
+LA +SG++ WG G L G + P P + + ++ +AA G+AH ++++
Sbjct: 197 SLAVVDSGEVYGWGY---NGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALS 253
Query: 121 EAGEVYTWG 129
+ G +YTWG
Sbjct: 254 DEGNIYTWG 262
>gi|348676334|gb|EGZ16152.1| hypothetical protein PHYSODRAFT_510114 [Phytophthora sojae]
Length = 158
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 10/125 (8%)
Query: 14 MEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGK 71
+ C + ++ WG LP + + +P R D + G + SESG
Sbjct: 34 LLSCGSSKLWHWGLLPSDCKDSPFVRQGVPVRFPLLDENIALIDVSVGLEHVVVLSESGC 93
Query: 72 LITWGSADDEGQSYL----TSGKHGETP---EPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
+ TWG GQ L TS E P + F + + + GW H V+V+ + E
Sbjct: 94 VFTWGYGS-SGQLGLGPAVTSNVGSEHPTQVDFFRNEADFCITAISCGWNHTVAVSRSSE 152
Query: 125 VYTWG 129
VY WG
Sbjct: 153 VYAWG 157
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 40.4 bits (93), Expect = 0.71, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F++A +ESG L WG + + G+ E P+ SVV+ A G HC+++TE
Sbjct: 92 FSIAIAESGLLFGWGRSLN-GELMCKQDSLHE-PKLLDKIMHWSVVQVACGAQHCIALTE 149
Query: 122 AGEVYTWG 129
G + +WG
Sbjct: 150 EGTILSWG 157
>gi|313236433|emb|CBY11750.1| unnamed protein product [Oikopleura dioica]
Length = 2239
Score = 40.4 bits (93), Expect = 0.71, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G G LA +ESG+L TWG D G+ + + P +VV G+ H
Sbjct: 1478 GSDGHTLAITESGELFTWGDG-DYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTA 1536
Query: 118 SVTEAGEVYTWGW 130
VT G +YT+G+
Sbjct: 1537 VVTATGYLYTFGY 1549
>gi|312079630|ref|XP_003142257.1| hypothetical protein LOAG_06673 [Loa loa]
Length = 405
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEG---QSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ G F+ A +E G +I WG+ +S+ T + + P + +VK AA
Sbjct: 239 MLAAGASFSAALTEKGSVIAWGNLRGMSGCIESHETLLEMEKQPVVIVQHQQKVIVKIAA 298
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H V +TE GEV T+G
Sbjct: 299 GENHLVMLTENGEVLTFG 316
>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 558
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 68/172 (39%), Gaps = 29/172 (16%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVSVTEAGEVY 126
S ++ WG +D GQ L G ++ EP LPT +V AAG H V++T AG V
Sbjct: 53 SDAILAWG-GNDGGQ--LGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAGTVL 109
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR------AGEEVVKRR 180
WG G G+ S+G+ P + PS R + +
Sbjct: 110 AWGRNT----------EGQLGNGTTTSSGE----PVAVSLPSGIRIVAVAVGADHSLALT 155
Query: 181 KTSSAREESENPAS--GDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILS 228
T S N GD T S P V L P + +AAG H L+L+
Sbjct: 156 STGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLT 207
>gi|449297034|gb|EMC93053.1| hypothetical protein BAUCODRAFT_76837 [Baudoinia compniacensis UAMH
10762]
Length = 510
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 70/207 (33%), Gaps = 63/207 (30%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE-- 81
++G+ P T P+L P ++ G ALA + +G + WGS
Sbjct: 231 IFGFNPTTITANRPVLVPELKKITH-------IAAGANHALALASNGAVFAWGSGQQNQL 283
Query: 82 GQSYLTSGK-HGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
G+ + K G P F LP A +V G H ++ +AG V+ WG
Sbjct: 284 GRRVVERTKTEGLKPREFGLPKGAKNGIVAIETGSYHSFAIDKAGNVHAWGL-------- 335
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
++G G +P + A DE
Sbjct: 336 --NNYGETG------------IP-----------------------------DNAGADEA 352
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTL 225
F L P ++ G K+ + GG H+L
Sbjct: 353 FVLKPRIIEALQGKKVISIKGGGHHSL 379
>gi|47085959|ref|NP_998341.1| protein RCC2 homolog [Danio rerio]
gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=Protein RCC2 homolog
gi|42744570|gb|AAH66628.1| Zgc:77115 [Danio rerio]
Length = 495
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 55 VCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
V G C +L + GKL +WG +D+GQ K E P+ E +V AA G
Sbjct: 126 VVSGPCAAHSLIITTEGKLWSWGR-NDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGR 184
Query: 114 AHCVSVTEAGEVYTWG 129
H +++TE G VYT+G
Sbjct: 185 NHTLALTENGTVYTFG 200
>gi|196010051|ref|XP_002114890.1| hypothetical protein TRIADDRAFT_28793 [Trichoplax adhaerens]
gi|190582273|gb|EDV22346.1| hypothetical protein TRIADDRAFT_28793 [Trichoplax adhaerens]
Length = 697
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 47 CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV 106
CG D +C GC ++ + KL + D + L KH T P + S+
Sbjct: 509 CGIDCSMVLCCDGCLLVCGSNRANKL-----SLDTSDTGLVDEKHSLTRVPSMPLSSLSI 563
Query: 107 VKAAAGWAHCVSVTEAGEVYTWG 129
+ AAG +H +TE G++YT G
Sbjct: 564 EQVAAGTSHTAVITEDGKLYTCG 586
>gi|19527092|ref|NP_598639.1| regulator of chromosome condensation isoform 2 [Mus musculus]
gi|81879377|sp|Q8VE37.1|RCC1_MOUSE RecName: Full=Regulator of chromosome condensation; AltName:
Full=Chromosome condensation protein 1
gi|18044692|gb|AAH19807.1| Regulator of chromosome condensation 1 [Mus musculus]
gi|148698162|gb|EDL30109.1| regulator of chromosome condensation 1, isoform CRA_d [Mus
musculus]
Length = 421
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + +A VVK A+G H V +T G+
Sbjct: 133 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGD 192
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQ 218
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 40.4 bits (93), Expect = 0.72, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G G ALA G L TWG D L G + P P +P VV AAG H
Sbjct: 505 AAGPGHALAVKADGTLWTWG---DNNTGQLGDGTTVDRPIPTQVPGVTGVVSVAAGLYHS 561
Query: 117 VSVTEAGEVYTWG 129
+ V G V+ WG
Sbjct: 562 LVVKVDGTVWAWG 574
>gi|148230808|ref|NP_001088703.1| uncharacterized protein LOC495967 [Xenopus laevis]
gi|56270445|gb|AAH87342.1| LOC495967 protein [Xenopus laevis]
Length = 394
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 31/128 (24%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARL-----CGGDSWKDVCG----GGCGFALATSESGKL 72
++ WG + + PIPA C +CG G +A S++G +
Sbjct: 168 IFQWGSGLASHARRFSQQKPIPAVYSSTEPCAVPGMNGICGKMVAAGSYHCVALSDAGDV 227
Query: 73 ITWGSADDEGQSYLTSGKHGET--PEPF---PLPTEAS------VVKAAAGWAHCVSVTE 121
WGS KHG+ +PF P +A +V +GW H V+ T+
Sbjct: 228 YVWGS-----------NKHGQLLHSDPFLLHPHRVQAHLFLGERIVAVVSGWTHLVAQTD 276
Query: 122 AGEVYTWG 129
G+V+TWG
Sbjct: 277 TGKVFTWG 284
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE 103
LC G V CG F L ++SG+L++ G+ +Y G+ GE P P +
Sbjct: 89 LCPGTLTLRVSKVACGWDFTLILTDSGELLSCGA-----NTYSQLGRAGEERSCIPRPLD 143
Query: 104 AS---VVKAAAGWAHCVSVTEAGEVYTWG 129
V+ AAG H +++T+ G+++ WG
Sbjct: 144 IQKRKVLDVAAGLRHVLALTDNGQIFQWG 172
>gi|405975788|gb|EKC40334.1| Alsin [Crassostrea gigas]
Length = 1341
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 80/215 (37%), Gaps = 56/215 (26%)
Query: 18 KETVVYMW-GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
K+ ++YMW GY K P L IP R G ++ + G+L + G
Sbjct: 45 KDGLLYMWQGYHGDVEVVKFPALFGIPIR---------KVAIGTDHSVFLTLDGRLFSCG 95
Query: 77 SADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
S + GQ + +G + +P + ++ + A G H +V+ G+VY WG
Sbjct: 96 S-NVHGQLGVITGDKDQAYDPVQVSGLSDVQIKDVACGCNHSAAVSRLGQVYCWG----- 149
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
+ FQ ST K +P Q P RE S++
Sbjct: 150 ----------DSREFQCASTEKTVTVP--QLVPV----------------HRETSDHCQH 181
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSG 229
G V + V I +V+ G HT+ LSG
Sbjct: 182 G----------VPIEDQVDIVEVSCGKSHTVALSG 206
>gi|340054997|emb|CCC49305.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 622
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 25/97 (25%)
Query: 60 CG--FALATSESGKLITWG--------SADDEGQSYLTSGKHGET-----------PEPF 98
CG F LA S G L +WG SAD+ S GE+ P+
Sbjct: 334 CGSFFTLALSNDGTLYSWGLLECLGLGSADEVRSMVRDSAIMGESLSAERRTVVLEPQVV 393
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG----WR 131
+PT+ +V+ AG H +++ AGE++TWG WR
Sbjct: 394 RVPTQHKLVRINAGQWHSGAISVAGELFTWGVGFQWR 430
>gi|313221384|emb|CBY32137.1| unnamed protein product [Oikopleura dioica]
Length = 1586
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G G LA +ESG+L TWG D G+ + + P +VV G+ H
Sbjct: 825 GSDGHTLAITESGELFTWGDG-DYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTA 883
Query: 118 SVTEAGEVYTWGW 130
VT G +YT+G+
Sbjct: 884 VVTATGYLYTFGY 896
>gi|198474556|ref|XP_001356744.2| GA17737 [Drosophila pseudoobscura pseudoobscura]
gi|198138441|gb|EAL33809.2| GA17737 [Drosophila pseudoobscura pseudoobscura]
Length = 458
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGET----PEPFPLPTEASVVK-AAAGWAHCV 117
LA +E G + WG+++ GQ L +H +T P L V+K AAG + C+
Sbjct: 287 VLALNERGDVFGWGNSE-YGQ--LDDSEHAQTQINTPRALQLTKGIGVIKDVAAGGSFCM 343
Query: 118 SVTEAGEVYTWGW 130
++ + G VYTWG+
Sbjct: 344 ALNDQGLVYTWGY 356
>gi|449663407|ref|XP_002166698.2| PREDICTED: uncharacterized protein LOC100197214 [Hydra
magnipapillata]
Length = 1459
Score = 40.4 bits (93), Expect = 0.74, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
VY+WGY + +L+P L +V G CG F L + GK +WG +
Sbjct: 916 VYVWGYSKACGSTNN-MLTPQKVDLL------NVVGIACGNNFTLCWTTCGKAYSWGVNN 968
Query: 80 D----EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G S S K ++P+ + +V+ +AG HC +VT+ G ++ WG
Sbjct: 969 HGVLGHGNS---SYKIEDSPKEITGFCDHFIVQMSAGTTHCGAVTKDGYLFVWG 1019
>gi|322701288|gb|EFY93038.1| Ran exchange factor Prp20/Pim1, putative [Metarhizium acridum CQMa
102]
Length = 576
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFP 99
P ++ G K + GG LA +ESG + WGS +H P
Sbjct: 265 PIQIGGLKDIKKLSAGG-NHVLALTESGDVYAWGSGQQAELGRRLVQRHQFESLIPRMVD 323
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
LP + +V+A AG+ H ++ + G+V+TWG
Sbjct: 324 LPRKG-IVEAFAGFNHSFAIDKDGQVWTWG 352
>gi|303282751|ref|XP_003060667.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458138|gb|EEH55436.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 233
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 55/145 (37%), Gaps = 37/145 (25%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGK-LITWGSADDEGQSYLTSG 89
T+P P L + + CGG F++A + G L +WG+ G L G
Sbjct: 72 TTPTTVPRLPRVGSFACGGS-----------FSVAANRHGAGLKSWGA---NGSGELGEG 117
Query: 90 KH-GETPEPFPLPTE-------ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTR 141
G P + A V+ +AGW H ++ G VYTWGW
Sbjct: 118 HDAGNESRAAPRAVDTSSVKGSADFVRVSAGWRHAAAIATDGGVYTWGWG---------- 167
Query: 142 DFGSAGSFQKD--STGKQSALPTEQ 164
GSAG D STG Q L +
Sbjct: 168 --GSAGQHHDDAFSTGGQLCLGVDN 190
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 40.4 bits (93), Expect = 0.74, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASV--VKAAAGWAH 115
GC ++A + SG L WG D L GK H EP P+ + V + +AG AH
Sbjct: 148 GCNHSMALTISGHLFCWG---DNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAH 204
Query: 116 CVSVTEAGEVYTWGWRE 132
+++ +G ++ WG E
Sbjct: 205 SFALSSSGALFGWGKNE 221
>gi|390345132|ref|XP_001186731.2| PREDICTED: regulator of chromosome condensation-like
[Strongylocentrotus purpuratus]
Length = 424
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 65 ATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A ++ GK+ WG+ D G LT G P+ +P + +VV+ A+G H +T G
Sbjct: 138 ALTDEGKVYAWGTFRDGNGPVGLTV--EGMKKTPYLIPLDETVVQIASGNDHLCMLTNQG 195
Query: 124 EVYTWGWRE 132
E+YT G E
Sbjct: 196 EIYTMGCGE 204
>gi|403355741|gb|EJY77458.1| hypothetical protein OXYTRI_00911 [Oxytricha trifallax]
Length = 922
Score = 40.4 bits (93), Expect = 0.74, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 31/176 (17%)
Query: 60 CG--FALATSESGKLITWGSAD---DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
CG + A +G L TWG ++GQ E PE + +VK A G
Sbjct: 320 CGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYPEKVKYLSSKRIVKVACGGF 379
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++T E+Y +G + ++G G+ + T K P K +
Sbjct: 380 HTLALTSENELYGFG----------SGNYGECGNGEFMDTSK---------PKLIKFPND 420
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGK 230
+ ++ + EE + DE F L + L +I AAGGRH+LI++ K
Sbjct: 421 HLDTKKNVTDDLEEYGH----DEEFVLE---MYLKEQPQILDFAAGGRHSLIITNK 469
>gi|366164990|ref|ZP_09464745.1| Ig domain-containing protein [Acetivibrio cellulolyticus CD2]
Length = 838
Score = 40.4 bits (93), Expect = 0.74, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 18 KETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
K+ V++WG L G IL+P R+ G + DV GG G+ LA G + +WG
Sbjct: 206 KDGTVWVWGESLSGN------ILTP--ERVNGLERVIDVSAGG-GYTLALKADGTVWSWG 256
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ G+ + ++ ETP E + A+ G HC+++ G V+ WG
Sbjct: 257 E-NQNGRLGDGTEENSETPVQVKGLKEIKRIAASYG-GHCLALKSDGTVWAWG 307
>gi|145539346|ref|XP_001455363.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423171|emb|CAK87966.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
AL TSE G+L TWG+ + GQ + K TP+ T+ + V + A G H V++T
Sbjct: 62 ALITSE-GELYTWGTGN-SGQLGHNNDKDYITPQLVEFFTKHNLKVKQVALGDYHTVALT 119
Query: 121 EAGEVYTWGW 130
G+V+TWG+
Sbjct: 120 HDGDVWTWGY 129
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 40.4 bits (93), Expect = 0.74, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 1
gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Mus musculus]
Length = 531
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 88/246 (35%), Gaps = 32/246 (13%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L T+E G + WG G S L +G + P + T V++ A G H +++
Sbjct: 87 VLLTTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GE++ WG+ C G GS ST Q KR +
Sbjct: 144 AADGELFAWGYNNC----------GQVGS---GSTANQPTPRKVTNCLHTKRVVNIACGQ 190
Query: 180 RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSG 229
+ + + E G+ L+P V G+ + ++ G HTL L+
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD 250
Query: 230 KSLESA 235
+ L A
Sbjct: 251 EGLLYA 256
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
++ WGY G S P P ++ K V CG ++A +SG++ WG
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V + G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWG 258
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 40.4 bits (93), Expect = 0.75, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG D +GQ L + P ++ +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A G+ H +++++A EV+ WG
Sbjct: 143 ACGYCHSLALSKASEVFCWG 162
>gi|384488176|gb|EIE80356.1| hypothetical protein RO3G_05061 [Rhizopus delemar RA 99-880]
Length = 351
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 27 YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQS 84
Y+ PEK + R WKDV CG+A L S+ GK+ GS+ +
Sbjct: 72 YILKAPPEKQQAWTVYQERFSE-IKWKDVA---CGWASTLLLSQEGKVYGVGSSR---WN 124
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ K + E + +V + GW H V+++ G V+ WGW
Sbjct: 125 EIDGKKDNKEQELTEILIHEDIVSVSCGWRHAVALSNEGNVFGWGW 170
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 40.4 bits (93), Expect = 0.76, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
PL E +K + GW H +T+ GE+YTWG
Sbjct: 1117 PLKNEKKAIKVSCGWDHIAVITDDGELYTWG 1147
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 40.4 bits (93), Expect = 0.76, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG D +GQ L + P ++ +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A G+ H +++++A EV+ WG
Sbjct: 143 ACGYCHSLALSKASEVFCWG 162
>gi|46116596|ref|XP_384316.1| hypothetical protein FG04140.1 [Gibberella zeae PH-1]
Length = 352
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 16/81 (19%)
Query: 52 WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
WKDV G G ++ G L WG DD GQ P P + K A
Sbjct: 239 WKDV-GASWGNIFILAKDGSLQAWGR-DDHGQ--------------LPPPNLPELSKIAI 282
Query: 112 GWAHCVSVTEAGEVYTWGWRE 132
G H V+++ AG+V +WGW E
Sbjct: 283 GSEHVVALSTAGDVLSWGWGE 303
>gi|384501769|gb|EIE92260.1| hypothetical protein RO3G_17067 [Rhizopus delemar RA 99-880]
Length = 429
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGS--ADDEGQSYLTSGKHGETPEPFPL 100
P RL + + V G C LA + G L +WG+ D + + TP F
Sbjct: 122 PVRLDVKERFVKVVSGDC-INLALTSEGDLYSWGTYRGADGAFGFSPTCSQQRTPVLFDP 180
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ ++V AAG H ++++ G +++WG+ E
Sbjct: 181 LIKETIVDIAAGTNHSLALSADGRLFSWGYGE 212
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 40.4 bits (93), Expect = 0.77, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ +
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV++WG
Sbjct: 144 CGYYHSLALSKASEVFSWG 162
>gi|326519524|dbj|BAK00135.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1067
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 22 VYMWGYLPG--------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
+Y WG+ G S + + +++P + G +V + + +G+L
Sbjct: 206 LYTWGFGRGGRLGHPDIRSGQTTAVITPRQVTVGLGRKKVNVVAAAKHHTVIATSAGELF 265
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TWGS + EGQ S TP + ++ AA H +V + GEV+TWG
Sbjct: 266 TWGS-NREGQLGYPSVDTQPTPRRVS-SLKQRIIAVAAANKHSAAVADTGEVFTWG 319
>gi|242779296|ref|XP_002479415.1| regulator of chromosome condensation, putative [Talaromyces
stipitatus ATCC 10500]
gi|218723034|gb|EED22452.1| regulator of chromosome condensation, putative [Talaromyces
stipitatus ATCC 10500]
Length = 388
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL--- 86
G S P +P+P+ L G V GG +LA +E G+ + WG D++ +
Sbjct: 221 GQSDAVIPYPTPVPS-LGKGLGIVSVIGG-KDHSLALNEQGQWLAWGRIDNKALGIIAKD 278
Query: 87 --TSGKHGET---PEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGEVYTWGWR 131
TS +T P +PT S VV AAAG H ++T+ G Y+WG+
Sbjct: 279 IPTSDVIFDTYKKPRILKVPTPISGVVGKVVFAAAGTDHSFAITQDGRAYSWGFN 333
>gi|241686129|ref|XP_002412816.1| williams-Beuren syndrome chromosomal region 16 protein, putative
[Ixodes scapularis]
gi|215506618|gb|EEC16112.1| williams-Beuren syndrome chromosomal region 16 protein, putative
[Ixodes scapularis]
Length = 467
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA SESG L WGS++ T+ K P V AA+G C V EAG
Sbjct: 300 LAVSESGDLFGWGSSEYGQFGRQTNEKQVSEARHLGFPY-GKVRFAASGATMCGVVNEAG 358
Query: 124 EVYTWGW 130
+VY WG+
Sbjct: 359 DVYVWGY 365
>gi|342873514|gb|EGU75680.1| hypothetical protein FOXB_13829 [Fusarium oxysporum Fo5176]
Length = 583
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 43 PARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSAD------------DEGQSYLTSG 89
PA+L D + GG +LA S+ G L+TWG D ++ Y G
Sbjct: 424 PAKLTYLDDYNITEIDGGEHHSLACSDKGDLLTWGRVDGYQVGFEFDKLSEDNTIYDERG 483
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
+P P +V AAG + ++ G+VY+WG+ + + T D
Sbjct: 484 NARILFKPTIQPDAKDIVAVAAGTDNNFAIASDGKVYSWGFSSNYQTGQGTID 536
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 11/103 (10%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS------ADDEGQSYLTSGKHGE 93
S IP RL ++ GG +LA G + WG D Y G+ E
Sbjct: 223 SNIP-RLVKNLENIEMIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLRE 281
Query: 94 T---PEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
EP L V + +AG H ++TE GEVY WGW E
Sbjct: 282 KRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNE 324
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 40.4 bits (93), Expect = 0.78, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|399218019|emb|CCF74906.1| unnamed protein product [Babesia microti strain RI]
Length = 392
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F +A + +G++ WG + TS + E PE +P +++ AAG H +
Sbjct: 161 GFKFGIARTSTGEVYLWGDGTYGELAMKTSNTYVELPERADIPFFNNIIDVAAGDRHALV 220
Query: 119 VTEAGEVYTWG 129
+ + G +Y++G
Sbjct: 221 LDDCGNIYSFG 231
>gi|374582676|ref|ZP_09655770.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Desulfosporosinus youngiae DSM 17734]
gi|374418758|gb|EHQ91193.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Desulfosporosinus youngiae DSM 17734]
Length = 747
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 14/105 (13%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCG-----GGCGFALATSESGKLITWGS--ADDEGQS 84
+P + + IPA++ + + + G G FALA + G + TWG D+EG
Sbjct: 197 NPSGKGLFTNIPAKVVVDTNGQALTGITKISAGSAFALALKDDGTVWTWGGLLVDEEG-- 254
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
H T + + V+ +AG+ H +++ G V+ WG
Sbjct: 255 -----VHNVTSAAIQVHSLTDVINISAGYNHSLALKSDGTVWGWG 294
>gi|348559816|ref|XP_003465711.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Cavia porcellus]
Length = 404
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 21 VVYMWGYLPGTS-----PEKS-PIL--SPIPARLCGGDSWKDVCG-GGCGFALATSESGK 71
+V+ WG +S PE++ P+ + P+++ G ++ K +C G + + +++G
Sbjct: 121 IVFQWGTGLASSGRRLCPEQTLPLFLTAKEPSKVTGLENSKAICVLAGSAHSASLTDAGD 180
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYT 127
L WGS + GQ + + P P + T V+ A +GW H V+ TE G+V+T
Sbjct: 181 LYVWGS-NKHGQ---LATQAAFLPVPQKIETHCFQSEKVMAAWSGWTHLVAQTETGKVFT 236
Query: 128 WG 129
WG
Sbjct: 237 WG 238
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 26/89 (29%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPE--------------------PFPLPTE 103
+A +E+GK+ TWG AD Y G+ ET E P PLP
Sbjct: 226 VAQTETGKVFTWGRAD-----YGQLGRKLETQEDWKVEKQDLSCCCSKRKNSAPSPLPCL 280
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
V+ + G H ++V G Y+WGW E
Sbjct: 281 MGAVEISCGSEHNLAVI-GGACYSWGWNE 308
>gi|354503314|ref|XP_003513726.1| PREDICTED: RCC1 domain-containing protein 1-like, partial
[Cricetulus griseus]
Length = 327
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 73/190 (38%), Gaps = 59/190 (31%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G L E+G++ +WG G+HG+ E P EA + +
Sbjct: 163 GAEHVLLLCEAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLRMAE 211
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G++Y WGW E Q ALP + +
Sbjct: 212 VAAGGWHSVCVSETGDIYIWGWNE----------------------SGQLALPIKSS--- 246
Query: 169 DKRAGEEVVKRRKTSSAREES---ENPASGDE-----FFTLS--PCLVTLNPGVKITKVA 218
A +++ RR+ + E+S E A D F + P L+ L G K +
Sbjct: 247 ---AEDKMAVRREATELNEDSLKGEEAAMADVGAPALFIAIQPFPALLDLPTGSDAVKAS 303
Query: 219 AGGRHTLILS 228
G RHT +++
Sbjct: 304 CGSRHTAVVT 313
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 40.4 bits (93), Expect = 0.79, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|348688712|gb|EGZ28526.1| hypothetical protein PHYSODRAFT_260366 [Phytophthora sojae]
Length = 409
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 71/175 (40%), Gaps = 7/175 (4%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
GD D+ G LA +++G + TWG + GQ +G + + P+ +
Sbjct: 188 GDEIVDIAAG-YQHGLAVTKNGTVFTWGKGE-RGQLGFGTG-NADAPQELIALKGKKIAH 244
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AG+ H +V+E GE+Y WG + P K+ + ++ Q +
Sbjct: 245 VGAGFNHSCAVSEDGELYLWG-KLLNPKGKMESNGDQITPRLVRTSDAVKLFKCSQFHTT 303
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK---ITKVAAG 220
A +E+ +T S R+E + A +P +T + V+ I K+ G
Sbjct: 304 FITADDEIWLAGRTPSGRQEKNDFAHVGSQMHTAPLQITNDQVVRAKDIVKIGKG 358
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV-----V 107
K VC F L +ESGKL T G A+ GQ + G+ + +P PT + V
Sbjct: 141 KIVCSTALTFLL--TESGKLFTLG-ANGYGQCGV--GEESVSVQP---PTHVDIDGDEIV 192
Query: 108 KAAAGWAHCVSVTEAGEVYTWG 129
AAG+ H ++VT+ G V+TWG
Sbjct: 193 DIAAGYQHGLAVTKNGTVFTWG 214
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 40.4 bits (93), Expect = 0.79, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|71651510|ref|XP_814432.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879402|gb|EAN92581.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 1134
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 52 WKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETP---EPFPLPTEASV 106
WK+V CG FA+A ++ G++ TWG + G + TP P L V
Sbjct: 834 WKEVTQVACGGTFAVALTQEGEVYTWGESLYCGHPRVV------TPCLTTPMLLEGLKDV 887
Query: 107 VKAAAGWAHCVSVTEAGEVYTWG 129
V AAG +H V+++ ++Y WG
Sbjct: 888 VAVAAGVSHAVALSYDHKIYAWG 910
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 22/125 (17%)
Query: 22 VYMWG-------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
+Y WG LP + P++ +P G + CG FA K+
Sbjct: 431 MYFWGGNGCGQCLLPESKTISGPVMVDVPKEY--GQIKEVACGSV--FAAVLFSDDKIGM 486
Query: 75 WGSADDEGQSYLTSGKHGET----------PEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
WG G + L+S K +T F P E +V AG HC+++T AG
Sbjct: 487 WGKDSMLGVT-LSSEKLCDTETGTGTRCAKHTIFSKPIEGEIVALRAGPFHCIAITSAGH 545
Query: 125 VYTWG 129
Y+WG
Sbjct: 546 AYSWG 550
>gi|351695932|gb|EHA98850.1| Regulator of chromosome condensation [Heterocephalus glaber]
Length = 437
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
K P L PIP + ++ G + S+SG++ ++G +DEG + G
Sbjct: 73 RKKPALVPIPEEVVQAEA-------GGMHTVCLSKSGQIYSFG-CNDEGALGRDTSVEGS 124
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + + VV+ +AG +H ++TE G V+ WG
Sbjct: 125 EMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWG 160
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P P+ + VVK A+G H V +T G+
Sbjct: 149 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVPVELDVPVVKVASGNDHLVMLTVDGD 208
Query: 125 VYTWGWRECVPSAKVTRDFGSAG 147
+YT G E +V F + G
Sbjct: 209 LYTLGCGEQGQLGRVPELFANRG 231
>gi|335290816|ref|XP_003356291.1| PREDICTED: regulator of chromosome condensation isoform 1 [Sus
scrofa]
Length = 443
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
K P L PIP + ++ G + S+SG++ ++G +DEG + G
Sbjct: 79 RKKPALVPIPEDIVQAEA-------GGMHTVCLSKSGQVYSFG-CNDEGALGRDTSVEGS 130
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + + VV+ +AG +H ++TE G V+ WG
Sbjct: 131 EMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWG 166
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 37/86 (43%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + VVK A+G H V +T GE
Sbjct: 155 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGE 214
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 215 LYTLGSGEQGQLGRVPELFANRGGRQ 240
>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_a [Mus musculus]
Length = 531
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 88/246 (35%), Gaps = 32/246 (13%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L T+E G + WG G S L +G + P + T V++ A G H +++
Sbjct: 87 VLLTTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GE++ WG+ C G GS ST Q KR +
Sbjct: 144 AADGELFAWGYNNC----------GQVGS---GSTANQPTPRKVTNCLHTKRVVNIACGQ 190
Query: 180 RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSG 229
+ + + E G+ L+P V G+ + ++ G HTL L+
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD 250
Query: 230 KSLESA 235
+ L A
Sbjct: 251 EGLLYA 256
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
++ WGY G S P P ++ K V CG ++A +SG++ WG
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V + G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWG 258
>gi|358370655|dbj|GAA87266.1| Ran exchange factor Prp20/Pim1 [Aspergillus kawachii IFO 4308]
Length = 571
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 59 GCGFALATSESGKLITWGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAH 115
G LA +E G + +WGS G+ + + +G P F LP ++V G H
Sbjct: 329 GDNHVLALNEKGAVFSWGSGQQNQLGRRIIERNRLNGLQPREFGLPK--NIVHIGCGAFH 386
Query: 116 CVSVTEAGEVYTWG 129
+V ++GEVY WG
Sbjct: 387 SFAVHQSGEVYAWG 400
>gi|326533910|dbj|BAJ93728.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 63/170 (37%), Gaps = 11/170 (6%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A + SG + TWG + + P P E +V A AH ++TE+GE
Sbjct: 156 ALTASGDVFTWGYGGFGALGHYVYHRE-LLPRKVNCPWEGKIVHIATSGAHTAAITESGE 214
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YTWG E + G + K SALP P A TS
Sbjct: 215 LYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVSALPV----PVAAVACGGFFTLALTSD 270
Query: 185 AREESENPASGDEFFTLS------PCLVTLNPGVKITKVAAGGRHTLILS 228
+ S S E S P +V V + +VA GG H+L L+
Sbjct: 271 GQLWSWGANSNFELGRGSNSSDWRPQIVPSLKNVHVIQVACGGYHSLALT 320
>gi|317027708|ref|XP_001399882.2| Ran exchange factor Prp20/Pim1 [Aspergillus niger CBS 513.88]
Length = 525
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEG---------QSYLTSGKHGETPEPFPLPT--- 102
+CGG ++A +E GK ++WG D++ L +HG P +PT
Sbjct: 383 ICGGK-DHSVAVTEDGKCLSWGRVDNKALGIPLADMPSDELVHDEHGR-PRILTVPTPLT 440
Query: 103 --EASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A A H ++T+ G+ Y+WG+
Sbjct: 441 DIKEEVVFATASSDHSFAITKDGQAYSWGFN 471
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 14/111 (12%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ 83
+ G+ P T ++ P+L P ++ G LA + G ++TWG +
Sbjct: 244 VIGFSPETKIQRQPVLVPGLEKVTH-------LASGAQHVLALTAKGAVLTWGCEEQNQL 296
Query: 84 SYLTSGK-HGETPEPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
SG+ HG+ P LP++ VV G H +V + G V+ WG
Sbjct: 297 GRRISGRLHGKLESLIPGQCALPSD--VVSIGTGSYHSFAVRKNGRVHAWG 345
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 59/166 (35%), Gaps = 48/166 (28%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K +P P +V+AA G HC++V +
Sbjct: 53 SLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDN 112
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G Y WG E +G G P K G ++R
Sbjct: 113 GHAYAWGGNE----------YGQCGE-----------------EPERKEDGTRALRRDIP 145
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ R P +K+ +VAAGG H+++L+
Sbjct: 146 TPQR---------------------CAPKLKVRQVAAGGTHSVVLT 170
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 91/241 (37%), Gaps = 59/241 (24%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S P R+ G + + V G LA +E G L W
Sbjct: 171 QEGHVWTWGQPWPPGDIKQIS-----TPVRVQGLEKVR-VIAVGAFHNLALTEDGILWAW 224
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWR 131
G+ + Y G P P+ E S+V AAG H ++T GEVY WG
Sbjct: 225 GNNE-----YGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRG 279
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR------------ 179
E G G F D + + L E AGE++V+
Sbjct: 280 E----------HGRLG-FGDDKSSRMVPLKVELL------AGEDIVQVSCGGTHSVALTR 322
Query: 180 --RKTSSAREESENPASGDEFFTLSPCLVTLN---PGVKITK--------VAAGGRHTLI 226
R S R + G + T P V ++ P + ++ VA GGRHTL
Sbjct: 323 DGRMFSYGRGDHGRLGYGRKLTTGQPMGVDIDLPPPKTRSSRDGQWQAKYVACGGRHTLA 382
Query: 227 L 227
+
Sbjct: 383 I 383
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 82/219 (37%), Gaps = 24/219 (10%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V +WG G K +SP P + G + CG ++ A + SG LI WG
Sbjct: 10 VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
G L G + P + +VV+ A H ++ GE+YTWG C + K
Sbjct: 70 ---GCGQLGFGNLEDCLVPRVNLSLKNVVQVACSDRHTAAILSNGELYTWG---CSKNGK 123
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-------- 190
+ G F+ + + P + ++ + T ++ +
Sbjct: 124 LGH-----GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGL 178
Query: 191 --NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
GD +P L+ G+ I +++ GG HT IL
Sbjct: 179 QGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAIL 217
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G + A ++ GK+ TWG G + +P+ +A +V + G +H V+
Sbjct: 263 GSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVA 322
Query: 119 VTEAGEVYTWGWRECV 134
+++ G++YTWG + +
Sbjct: 323 LSDVGDIYTWGMTKNI 338
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 40.0 bits (92), Expect = 0.83, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G+ H +++++A EV+ WG
Sbjct: 144 CGYYHSLALSKASEVFCWG 162
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 40.0 bits (92), Expect = 0.83, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 47 CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV 106
CGG + G + +SG+L G A ++ Y+T+ P +P +
Sbjct: 622 CGGSHTVVLSCTGVVYVFGNGQSGQL---GVAVNQTSPYITN------PCILSMPNNTKI 672
Query: 107 VKAAAGWAHCVSVTEAGEVYTWG 129
K G H +VTE+G +YTWG
Sbjct: 673 AKVDCGIEHTAAVTESGCLYTWG 695
>gi|358399384|gb|EHK48727.1| hypothetical protein TRIATDRAFT_53795 [Trichoderma atroviride IMI
206040]
Length = 359
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 52 WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
WKDV G G G LI WG D HG+ P P P + K A
Sbjct: 246 WKDV-GASWGNFYILGTDGSLIAWGRDD-----------HGQLPPPNLPPVD----KIAI 289
Query: 112 GWAHCVSVTEAGEVYTWGWRE 132
G H V+++ G+V +WGW E
Sbjct: 290 GSEHVVALSAEGDVVSWGWGE 310
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 60/166 (36%), Gaps = 48/166 (28%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G+L TWG + K +P P +V+AA G HC++V +
Sbjct: 53 SLAICDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDK 112
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G Y WG E +G G P K G ++R
Sbjct: 113 GRAYAWGGNE----------YGQCGE-----------------EPERKEDGTRALRRDIP 145
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ R C + L K+ +VAAGG H+++L+
Sbjct: 146 TPQR-----------------CALKL----KVQQVAAGGTHSVVLT 170
>gi|350634707|gb|EHA23069.1| hypothetical protein ASPNIDRAFT_207002 [Aspergillus niger ATCC
1015]
Length = 524
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEG---------QSYLTSGKHGETPEPFPLPT--- 102
+CGG ++A +E GK ++WG D++ L +HG P +PT
Sbjct: 382 ICGGK-DHSVAVTEDGKCLSWGRVDNKALGIPLADMPSDELVHDEHGR-PRILTVPTPLT 439
Query: 103 --EASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A A H ++T+ G+ Y+WG+
Sbjct: 440 DIKEEVVFATASSDHSFAITKDGQAYSWGFN 470
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 14/111 (12%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ 83
+ G+ P T ++ P+L P ++ G LA + G ++TWG +
Sbjct: 243 VIGFSPETKIQRQPVLVPGLEKVTH-------LASGAQHVLALTAKGAVLTWGCEEQNQL 295
Query: 84 SYLTSGK-HGETPEPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
SG+ HG+ P LP++ VV G H +V + G V+ WG
Sbjct: 296 GRRISGRLHGKLESLIPGQCALPSD--VVSIGTGSYHSFAVRKNGRVHAWG 344
>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
Length = 1765
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAAGWAH 115
GCG +A + +G + WGS +DEGQ L + EP L ++ + + A G H
Sbjct: 507 GCGENHTVALTGTGAVWVWGS-NDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIACGSKH 565
Query: 116 CVSVTEAGEVYTWG 129
C++V + G+V+ WG
Sbjct: 566 CLAVAQYGDVFAWG 579
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.129 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,460,213,211
Number of Sequences: 23463169
Number of extensions: 197442154
Number of successful extensions: 429314
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 1787
Number of HSP's that attempted gapping in prelim test: 418029
Number of HSP's gapped (non-prelim): 10993
length of query: 254
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 115
effective length of database: 9,097,814,876
effective search space: 1046248710740
effective search space used: 1046248710740
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 75 (33.5 bits)