BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025335
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.7 bits (86), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.7 bits (86), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3239 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 3293
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3294 HCLAVTDAGQVYAWG 3308
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4302 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4360
Query: 119 VTEAGEVYTWG 129
+++GEVYTWG
Sbjct: 4361 CSDSGEVYTWG 4371
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F++A S G+L TWG A G + G P +V A AHC
Sbjct: 779 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 838
Query: 117 VSVTEAGEVYTWG 129
++++ +GEV+ WG
Sbjct: 839 LALSSSGEVFGWG 851
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G G +LA + G + WG D L +G + +P + + V + AG
Sbjct: 728 GSGDAHSLALTSEGLVFAWGDGD---YGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFS 784
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTR 141
V+++ G++YTWG C+ V R
Sbjct: 785 VALSSEGQLYTWGKATCLGHQLVER 809
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
L G + CG LA +E G + +WG D G+ + +TP +
Sbjct: 3174 LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGD-FGKLGRGGSEGSDTPHEIERLSGIG 3232
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV+ G +++T AGEV+TWG
Sbjct: 3233 VVQIECGAQFSLALTRAGEVWTWG 3256
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4237 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4291
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWG 129
VVK G V++T++G VYTWG
Sbjct: 4292 AGLGVVKVECGSQFSVALTKSGAVYTWG 4319
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G ALA + GK+ +WG +D G T P EA + A G +
Sbjct: 3081 GGKHALALTLDGKVFSWGEGEDG-----KLGHGNRTTLDKPRLVEALRAKKIRDVACGSS 3135
Query: 115 HCVSVTEAGEVYTWGWRE 132
H +++ GE+YTWG E
Sbjct: 3136 HSAAISSQGELYTWGLGE 3153
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 15/79 (18%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAA-- 110
GC ++ A + G L+TWG +Y G HG + + LPT + VV A
Sbjct: 676 GCSYSAAITCGGNLLTWGRG-----TYARLG-HGNSDDR-SLPTLVVALSDHMVVDVALG 728
Query: 111 AGWAHCVSVTEAGEVYTWG 129
+G AH +++T G V+ WG
Sbjct: 729 SGDAHSLALTSEGLVFAWG 747
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
K G LA + G++ WG +D G+ + + P+ SV A G
Sbjct: 4138 KVAVNSGGKHCLALTTEGEVYAWGEGED-GKLGHGNRMSYDRPKLVEHLNGMSVADIACG 4196
Query: 113 WAHCVSVTEAGEVYTWG 129
AH ++T +G V TWG
Sbjct: 4197 SAHSAAITASGHVLTWG 4213
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ +G+ L +PC V G+++ +VA G
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYA 267
Query: 223 HTLILS 228
HTL+L+
Sbjct: 268 HTLVLT 273
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTANQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ V+ A G ++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 232
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 38.5 bits (88), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP----ASGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ +G+ L +PC V G+++ +VA G
Sbjct: 208 MSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYA 267
Query: 223 HTLILS 228
HTL+L+
Sbjct: 268 HTLVLT 273
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTANQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ V+ A G ++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYN 232
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWG 3283
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + V+K G +++T+ G+VY+WG
Sbjct: 649 PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4054 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4108
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4109 TAAGDLYTWG 4118
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 47/235 (20%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKS 231
K + S + +++ G E P L+ G K+ VAAG H L L+ S
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDS 729
Score = 34.3 bits (77), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ ++ VVK
Sbjct: 4152 CGSGDAQTLCLTDDDTVWSWGDGD-----YGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4206
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T++G VYTWG
Sbjct: 4207 GSQFSVALTKSGAVYTWG 4224
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWG 3282
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 593 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 647
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + VVK G +++T+ G+VY+WG
Sbjct: 648 PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSV 119
LA S G++ +WG A+D G +P P E+ VV AAG AH V
Sbjct: 4052 LALSSEGEVYSWGEAEDG-----KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 120 TEAGEVYTWG 129
T AG++YTWG
Sbjct: 4107 TAAGDLYTWG 4116
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 47/235 (20%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKS 231
K + S + +++ G E P L+ G K+ VAAG H L L+ S
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDS 728
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ ++ VVK
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGD-----YGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T++G VYTWG
Sbjct: 4205 GSQFSVALTKSGAVYTWG 4222
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 41/181 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 S 228
+
Sbjct: 316 T 316
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VK + G H VT GE+YTWGW
Sbjct: 288 QPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGW 326
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++F S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 39.3 bits (90), Expect = 0.025, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 49/228 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILS 228
FT SP V G+ + +VAAGG H+ LS
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 38.9 bits (89), Expect = 0.035, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGG-AHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ ++T A + + P + F P L+ L G K + G RHT +++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVT 316
Score = 39.3 bits (90), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 288 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGW 326
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG + S + +P+P + G K + CG LA + G++ +WG
Sbjct: 89 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEGEVQSWG 145
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + P+ + AAG H +VTE G++Y WGW
Sbjct: 146 R-NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 198
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 283 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 341
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 342 AVTERNNVFAWG 353
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 50/193 (25%)
Query: 59 GCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAG 112
G +A S+SG ++ +WG D HG + + F PLP +A + + A G
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+HC++VT GEV +WG ++ G+ TE + K
Sbjct: 129 DSHCLAVTMEGEVQSWG---------------------RNQNGQLGLGDTEDSLVPQKIQ 167
Query: 173 GEEVVKRRKTSSAREESE-----------------NPASGDEFFTLSPCLVTLNPGVKIT 215
E ++ + ++ E + N GD L P VT G K++
Sbjct: 168 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS 227
Query: 216 KVAAGGRHTLILS 228
VA G RHT+ +S
Sbjct: 228 MVACGWRHTISVS 240
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ ++ S SG L T+G + GQ + P + + + + + GW H +
Sbjct: 231 CGWRHTISVSYSGALYTYGWSK-YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTM 289
Query: 118 SVTEAGEVYTWGWRE 132
++T G++Y WGW +
Sbjct: 290 ALTSDGKLYGWGWNK 304
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE + A GW H +SV+ +G
Sbjct: 186 AVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 125 VYTWGW 130
+YT+GW
Sbjct: 245 LYTYGW 250
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K V G CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G +G P + SV + G+AH +++T+ G +Y WG
Sbjct: 208 --NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWREC 133
GEV+ WG+ C
Sbjct: 144 AADGEVFAWGYNNC 157
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 21 VVYMWGYLPGTSPEKSPILSPI-PARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS 77
VVY WG+ + I P ++C K V CG ++A + G++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPT---EASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
++ GQ + SG P P + VV A G ++V + GEVY WG+
Sbjct: 155 -NNCGQ--VGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYN 208
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWG 129
+ H +VTE GE+YTWG
Sbjct: 520 YRHSAAVTEDGELYTWG 536
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4228 SSPQKIDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4275
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A V+ A G H +++ G+VY WG
Sbjct: 4276 ARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWG 4316
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 47/214 (21%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4079 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILSG 229
P VT G +I +VA G HTL +S
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA 4203
Score = 31.6 bits (70), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
+ VC G +LA + +G++ WG G +S P+ +V + G
Sbjct: 617 RKVCAGSQS-SLALTSTGQVYAWGCGACLGCG--SSEATALRPKLIEELAATRIVDVSIG 673
Query: 113 WAHCVSVTEAGEVYTWG 129
+HC++++ EVY WG
Sbjct: 674 DSHCLALSHDNEVYAWG 690
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 59 GCGFALATSESGKLITWGSAD-DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G LA S G ++ W D D G+ L + +P+ + + K A G V
Sbjct: 4194 GLNHTLAVSADGSMV-WAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSV 4252
Query: 118 SVTEAGEVYTWG 129
++T+ G VYT+G
Sbjct: 4253 ALTKDGHVYTFG 4264
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 59 GCGFALATSESGKLITWGSADD--EGQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAH 115
G +A + +GK+ TWG+ G+ L + G TP+P L +++ AG H
Sbjct: 234 GTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLAL---KNIISVGAGSYH 290
Query: 116 CVSVTEAGEVYTWGW---REC 133
++ G VY WG R+C
Sbjct: 291 SFAIDNKGRVYAWGLNITRQC 311
Score = 38.1 bits (87), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------------PEPFPLPTEAS 105
GG LA E G+++ WG DD Q + ET P +P +
Sbjct: 343 GGEHHTLALLEDGRVLAWGR-DDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTN 401
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRE 132
V++ G H ++VT G+VY+WG E
Sbjct: 402 VIQVVCGTHHNLAVTSDGKVYSWGSAE 428
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGFAL--ATSESGKLITWGS--ADDEGQSYLTSGKHGE 93
+L P+++ G S V C L A +++G TWG+ D Y S K
Sbjct: 159 LLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTA 218
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P LP + + A G H +++T G+VYTWG
Sbjct: 219 EPTQMRLP---EICQLATGTDHIIALTTTGKVYTWG 251
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
P + VV A G H +++ G VYTWG + ++T+D QKD G
Sbjct: 101 PILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKD-------QKDENGD 153
Query: 157 Q 157
+
Sbjct: 154 K 154
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 55 VCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
V G C +L + GKL +WG +D+GQ K E P+ E +V AA G
Sbjct: 126 VVSGPCAAHSLIITTEGKLWSWGR-NDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGR 184
Query: 114 AHCVSVTEAGEVYTWG 129
H +++TE G VYT+G
Sbjct: 185 NHTLALTENGTVYTFG 200
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + +A VVK A+G H V +T G+
Sbjct: 133 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGD 192
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQ 218
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 66 TSESGKLITWGSAD----DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+E G ++T G D G+S L E +P +P VV+A AG H V +++
Sbjct: 31 NTEPGLVLTLGQGDVGQLGLGESVL------ERKKPALVPLLQDVVQAEAGGMHTVCLSQ 84
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS 148
+G+VY++G C + RD GS
Sbjct: 85 SGQVYSFG---CNDEGALGRDTSVEGS 108
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
S+SG++ ++G +DEG + G P + + VV+ +AG +H ++TE G V+
Sbjct: 83 SQSGQVYSFG-CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVF 141
Query: 127 TWG 129
WG
Sbjct: 142 LWG 144
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 88/246 (35%), Gaps = 32/246 (13%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L T+E G + WG G S L +G + P + T V++ A G H +++
Sbjct: 87 VLLTTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GE++ WG+ C G GS ST Q KR +
Sbjct: 144 AADGELFAWGYNNC----------GQVGS---GSTANQPTPRKVTNCLHTKRVVNIACGQ 190
Query: 180 RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSG 229
+ + + E G+ L+P V G+ + ++ G HTL L+
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD 250
Query: 230 KSLESA 235
+ L A
Sbjct: 251 EGLLYA 256
Score = 38.1 bits (87), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
++ WGY G S P P ++ K V CG ++A +SG++ WG
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V + G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWG 258
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 40.0 bits (92), Expect = 0.015, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 46/188 (24%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-----------------GKQ 157
H ++++ +G +Y+WG EC G + KD G
Sbjct: 202 HSMALSMSGNIYSWGKNEC-------GQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
SAL T+ AG K + ++E L PCLV G ++T++
Sbjct: 255 SALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGYRVTQI 300
Query: 218 AAGGRHTL 225
A G HTL
Sbjct: 301 ACGRWHTL 308
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 39.7 bits (91), Expect = 0.019, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG D +GQ L + P ++ +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A G+ H +++++A EV+ WG
Sbjct: 143 ACGYYHSLALSKASEVFCWG 162
Score = 34.7 bits (78), Expect = 0.66, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 75/185 (40%), Gaps = 33/185 (17%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILS 228
+ +L+
Sbjct: 202 SFVLT 206
Score = 33.1 bits (74), Expect = 1.8, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYL-TSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG+ +LA S++ ++ WG + GQ L T K +P+ ++ AAG AH
Sbjct: 143 ACGYYHSLALSKASEVFCWGQ-NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201
Query: 116 CVSVTEAGEVYTWG 129
+T +G ++ WG
Sbjct: 202 SFVLTLSGAIFGWG 215
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 39.7 bits (91), Expect = 0.020, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG D +GQ L + P ++ +V+
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A G+ H +++++A EV+ WG
Sbjct: 143 ACGYYHSLALSKASEVFCWG 162
Score = 34.7 bits (78), Expect = 0.69, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 33/185 (17%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V A G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVACGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILS 228
+ +L+
Sbjct: 202 SFVLT 206
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 39.7 bits (91), Expect = 0.023, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG D +GQ L + P ++ +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A G+ H +++++A EV+ WG
Sbjct: 143 ACGYYHSLALSKASEVFCWG 162
Score = 33.5 bits (75), Expect = 1.5, Method: Composition-based stats.
Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 47/192 (24%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPP-----SDK--RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+A +K + G + +++T SP L+ G+ +
Sbjct: 154 KASEVFCWGQNKYGQLGLGIECQKQT-------------------SPQLIKSLLGIPFMQ 194
Query: 217 VAAGGRHTLILS 228
VAAGG H+ +L+
Sbjct: 195 VAAGGAHSFVLT 206
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 38.5 bits (88), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + + VVK A+G H V +T G+
Sbjct: 133 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGD 192
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQ 218
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 67 SESGKLITWGSAD----DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+E G ++T G D G+S L E +P +P VV+A AG H V + ++
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVL------ERKKPALVPLLQDVVQAEAGGMHTVCLNQS 85
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGS 148
G+VY++G C + RD GS
Sbjct: 86 GQVYSFG---CNDEGALGRDTSVEGS 108
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
++SG++ ++G +DEG + G P + + VV+ +AG +H ++TE G V+
Sbjct: 83 NQSGQVYSFG-CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVF 141
Query: 127 TWG 129
WG
Sbjct: 142 LWG 144
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 37.7 bits (86), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 67/184 (36%), Gaps = 49/184 (26%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G L +G++ +WG+ G+HG+ E P EA + K
Sbjct: 169 GAEHVLLLCAAGQVFSWGA-----------GRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E Q ALPT +
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG--T 253
Query: 169 DKRAGEEVVKRRKTSSAREESENPASG--DEFFTLS--PCLVTLNPGVKITKVAAGGRHT 224
+ +A E +EE +G F + P L+ L G + G RHT
Sbjct: 254 ENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHT 313
Query: 225 LILS 228
+++
Sbjct: 314 AVVT 317
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + V A+ G H VT GE+YTWGW
Sbjct: 289 QPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGW 327
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 23/99 (23%)
Query: 43 PARLCGGDSWKDVCG-GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE----- 96
P+R+ G ++ VC G + + +++G+L WG KHG+
Sbjct: 203 PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGR-----------NKHGQLASRAVFL 251
Query: 97 PFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
P P EA V +GW H V+ TE G+V+TWG
Sbjct: 252 PLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 53 KDVC-GGGCGFALATSESGKLITWGSADDEGQSYLTSGKH------GETPEPFPLPTEAS 105
K VC G ALAT+ +G + WG+ L G++ + P ++
Sbjct: 154 KVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENST 213
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
V A AG H S+T+ GE+Y WG
Sbjct: 214 AVCAVAGSDHSASLTDTGELYVWG 237
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A ++ G++ WGS D ++ P + + VVK A+G H V +T G+
Sbjct: 133 ALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGD 192
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQ 218
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
K P L IP + ++ G + S+SG++ ++G +DEG + G
Sbjct: 57 RKKPALVSIPEDVVQAEA-------GGMHTVCLSKSGQVYSFG-CNDEGALGRDTSVEGS 108
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + + VV+ +AG +H ++T+ G V+ WG
Sbjct: 109 EMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWG 144
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
++E G ++T G D GQ L E +P + VV+A AG H V ++++G+V
Sbjct: 31 STEPGLVLTLGQGD-VGQLGLGENVM-ERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQV 88
Query: 126 YTWGWRECVPSAKVTRDFGSAGS 148
Y++G C + RD GS
Sbjct: 89 YSFG---CNDEGALGRDTSVEGS 108
>sp|Q9NB71|HIW_DROME E3 ubiquitin-protein ligase highwire OS=Drosophila melanogaster
GN=hiw PE=1 SV=2
Length = 5233
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 29/221 (13%)
Query: 37 PILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGET 94
P ++P+ +L S V CG + + +G++ T+GS + GQ L SG
Sbjct: 950 PRVAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGS-NQYGQ--LGSGDLQPV 1006
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P + ++ + AAG H V +T G VYT+G + ++ D+G Q D +
Sbjct: 1007 SGPVRVQVPGAISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYGLKPPPQDDDS 1066
Query: 155 -------GKQSALPT-----------EQAPPSDKRAG-EEVVKRRKTSSAREESENPASG 195
G PT Q+P + + +G +E+ + R++ S
Sbjct: 1067 PVGAGSDGGAGGSPTVAPVGMPGPERSQSPANVQPSGSKEMPPLLPVLTQRQKFLWNCSP 1126
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSGKSLESAE 236
F L PC G K+T + A G T I +SL +A+
Sbjct: 1127 GAVFGLGPCY-----GKKVTWIGANGDQTFIKIDESLITAQ 1162
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
+P +P KS PI CG D F + +E+G++++ GS + GQ +
Sbjct: 89 IPYFTPCKSLFGCPIQQVACGWD-----------FTIMLTENGQVLSCGS-NSFGQLGVP 136
Query: 88 SG-KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G + P+ L E VV AAG H V+ T +G V+ WG
Sbjct: 137 HGPRRCVVPQAIELHKE-KVVCIAAGLRHAVAATASGIVFQWG 178
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 43 PARLCGGDSWKDVCG-GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE----- 96
P+R+ G ++ K +C G + + +++G++ WGS KHG+
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGS-----------NKHGQLANEAAFL 251
Query: 97 PFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
P P EA V +GW H V+ TE G+++TWG
Sbjct: 252 PVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG 290
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 29/134 (21%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
VY+WG P+P ++ C + G +A +E+GK+ TWG A
Sbjct: 233 VYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRA 292
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--------------------KAAAGWAHCVS 118
D Y G+ ET E + L + S + + + G H ++
Sbjct: 293 D-----YGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLA 347
Query: 119 VTEAGEVYTWGWRE 132
+ G Y+WGW E
Sbjct: 348 II-GGVCYSWGWNE 360
>sp|P52499|RCC1_CANAX Protein RCC1 OS=Candida albicans GN=RCC1 PE=3 SV=1
Length = 464
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 19/103 (18%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET--------PEPFPLPTEASVVKAAAGWAH 115
A S + WG + GQ LT G +GE P P + + + AAG H
Sbjct: 264 FAIDHSHNVYAWG-LNQYGQCALT-GDNGELEDGSVLMKPTLIPELSHKGIKEIAAGEHH 321
Query: 116 CVSVTEAGEVYTWGW---------RECVPSAKVTRDFGSAGSF 149
+++TE G+VY WG ++ +P + + G+ GSF
Sbjct: 322 TLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGTHGSF 364
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 18/83 (21%)
Query: 64 LATSESGKLITWGSADDE-----------GQSYLTSGKHGETPEPFPLPTEASVVKA--- 109
LA +E G++ WG D + + +G HG F VK
Sbjct: 323 LALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGTHGS----FSFLQNLFAVKIKTI 378
Query: 110 AAGWAHCVSVTEAGEVYTWGWRE 132
G H +VTE G VY WG+ E
Sbjct: 379 GVGSHHSFAVTEDGVVYAWGFAE 401
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 53 KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ V G C +L + GKL +WG +++GQ K E P + ++V AA
Sbjct: 149 RTVVSGSCAAHSLLITTEGKLWSWGR-NEKGQLGHGDTKRVEAPRLIEALSHEAIVLAAC 207
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H +++T+ G V+ +G
Sbjct: 208 GRNHTLALTDTGSVFAFG 225
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 53 KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ V G C +L + GKL +WG +++GQ K E P + +V AA
Sbjct: 151 RTVVSGSCAAHSLLITTEGKLWSWGR-NEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAAC 209
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H +++TE G V+ +G
Sbjct: 210 GRNHTLALTETGSVFAFG 227
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAA 110
D+ G +LA G++ WG A EGQ L G+ E TP+ + +++ +
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWG-AGSEGQ--LGIGEFKEISFTPKKIMTLNDIKIIQVS 134
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G H +++++ +V++WG
Sbjct: 135 CGHYHSLALSKDSQVFSWG 153
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 11/120 (9%)
Query: 18 KETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
K++ V+ WG G E SP R G V GG + A S G
Sbjct: 145 KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG-AHSFALSLCGTSF 203
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
WGS + GQ L SG++ PL A VV + G AH +T+ G+V+T+G
Sbjct: 204 GWGS-NSAGQLAL-SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
>sp|Q54Q89|RCCDC_DICDI RCC1 repeat-containing protein DDB_G0284033 OS=Dictyostelium
discoideum GN=DDB_G0284033 PE=4 SV=2
Length = 487
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP----FPLPTEASVVKAAAGWA 114
G F +A S GKL ++GS+ + L +G EP L + ++ G+
Sbjct: 250 GATFTIALSNDGKLYSFGSST---FNELGNGDMFNEREPKLIDNQLLQDNEIIDLECGFF 306
Query: 115 HCVSVTEAGEVYTWGWR---ECVP 135
H V++T ++ TWG +C P
Sbjct: 307 HTVALTSDNKILTWGRNQESQCFP 330
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A +E G+ T+GS + GQ L + P+ + + AA G A ++
Sbjct: 576 GTAHSVAVTEKGQCFTFGS-NQHGQ--LGCSHRRSSRVPYQVSGLQGITMAACGDAFTLA 632
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
+ GEVYTWG + DFG Q D +
Sbjct: 633 IGAEGEVYTWGKGARGRLGRKEEDFGIPKPVQLDES 668
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSY 85
LPG + P +R G S + CG F ++ G ++T+GS +
Sbjct: 376 LPGAVEQMQP---QFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSN---GC 429
Query: 86 LTSGKHGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWG 129
L G + +P + +V+ + G +H ++VT EV++WG
Sbjct: 430 LGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWG 475
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 53 KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ V G C +L + GKL +WG +D+GQ K + P+ V AA
Sbjct: 142 RSVASGSCAAHSLLITVEGKLWSWGR-NDKGQLGHGDIKRIDVPKLIESLKGEVFVHAAC 200
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H +++TE G VY +G
Sbjct: 201 GRNHTLALTENGSVYAFG 218
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
D+ K + G A A +E GKL WG + EGQ L E +P E +V K
Sbjct: 139 ADTIKQLSAGANTSA-ALTEDGKLFMWGD-NSEGQIGL------EDKSNVCIPHEVTVGK 190
Query: 109 ----AAAGWAHCVSVTEAGEVYTWG 129
+ G+ H VT GE+YT+G
Sbjct: 191 PISWISCGYYHSAFVTMDGELYTFG 215
>sp|Q17551|RPM1_CAEEL E3 ubiquitin-protein ligase rpm-1 OS=Caenorhabditis elegans
GN=rpm-1 PE=1 SV=1
Length = 3766
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG LA+ ++ T+GS + GQ + TP+ LP++ +V+ AAG H
Sbjct: 774 CGNFHTVLLASDR--RVFTFGS-NCHGQLGVGDTLSKNTPQQVILPSDTVIVQVAAGSNH 830
Query: 116 CVSVTEAGEVYTWG 129
+ G V+T+G
Sbjct: 831 TILRANDGSVFTFG 844
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 34.7 bits (78), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEASVVKAAAGW 113
GG FAL S +G WGS + GQ L+ K E P SV+ + G+
Sbjct: 188 GGTHSFAL--SLTGTSFGWGS-NRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGY 244
Query: 114 AHCVSVTEAGEVYTWG 129
H +TE G+V+T+G
Sbjct: 245 EHTAVLTEEGQVFTFG 260
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 34.7 bits (78), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK----AAAGWA 114
G + A +E G+L WG + EGQ L E +P + +V K + G+
Sbjct: 148 GSNTSAALTEDGELFMWGD-NSEGQIGL------ENVTNVCVPQQVTVGKPISWISCGYY 200
Query: 115 HCVSVTEAGEVYTWGWREC 133
H VT G++YT+G EC
Sbjct: 201 HSAFVTTEGQLYTFGEPEC 219
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 34.3 bits (77), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
Query: 63 ALATSESGKLITWGSAD--------DEGQSYLTSGKHGETPEPFPLPTEASVV----KAA 110
+L S+ G L + G D D Y HG+ PLPT+ + V A
Sbjct: 342 SLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKA-RAVPLPTKLNNVPKFKSVA 400
Query: 111 AGWAHCVSVTEAGEVYTWGWRE 132
AG H V+V + G Y+WG+ E
Sbjct: 401 AGSHHSVAVAQNGIAYSWGFGE 422
>sp|Q18211|RCC1_CAEEL Regulator of chromosome condensation OS=Caenorhabditis elegans
GN=ran-3 PE=4 SV=1
Length = 569
Score = 34.3 bits (77), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
Query: 55 VCGGGCGFALATSESGKLITWGSA-DDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAA 111
+ G F A ++ G +I WG+ + G + H P + +A +VK AA
Sbjct: 248 MLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAA 307
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
G H V + E G + T+G E + +R + D +G +P
Sbjct: 308 GENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHLLVP 357
>sp|Q5BIW4|ALS2_PANTR Alsin OS=Pan troglodytes GN=ALS2 PE=2 SV=1
Length = 1657
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVTRD 142
TPE P +V++AA G H V +TE GEVY++G WR E PS+ + +
Sbjct: 31 TPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILEN 86
>sp|Q96Q42|ALS2_HUMAN Alsin OS=Homo sapiens GN=ALS2 PE=1 SV=2
Length = 1657
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVTRD 142
TPE P +V++AA G H V +TE GEVY++G WR E PS+ + +
Sbjct: 31 TPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILEN 86
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
SG + T+G +DEG + + G +P + VV+ +AG +H ++TE G V+ +
Sbjct: 91 SGSIYTFG-CNDEGALGRDTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVF 149
Query: 129 G 129
G
Sbjct: 150 G 150
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G+++T G D GQ L E +P + +V+AAAG H V + +G +YT+G
Sbjct: 41 GQVLTLGQGD-VGQLGLGEDIM-ERKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTFG 98
Query: 130 WRECVPSAKVTRDFGSAGS 148
C + RD GS
Sbjct: 99 ---CNDEGALGRDTSEEGS 114
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ +GS D ++ P + V+K A+G H V +T G+
Sbjct: 139 ALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQINTPVIKIASGNDHLVLLTVDGD 198
Query: 125 VYTWGWRECVPSAKVTRDFGSAG 147
+YT G E +V F + G
Sbjct: 199 LYTSGCGEQGQLGRVPERFTNRG 221
>sp|Q54VW7|GACGG_DICDI Rho GTPase-activating protein gacGG OS=Dictyostelium discoideum
GN=gacGG PE=3 SV=1
Length = 1203
Score = 33.5 bits (75), Expect = 1.6, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 22/119 (18%)
Query: 22 VYMWG----YLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWG 76
+Y WG + ++ + I PI ++ K + CGG F+ A E+G L WG
Sbjct: 55 LYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGN--FSAAIMENGLLYVWG 112
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT------EAGEVYTWG 129
+ + GK E+P L + V + G HC V E VYTWG
Sbjct: 113 -------TLIEGGKCTESPTKVDLLKGVTCV--SIGINHCAVVADSPTTPEKRSVYTWG 162
Score = 33.1 bits (74), Expect = 1.9, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 20/126 (15%)
Query: 7 KREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
K +EN + + V+Y WG P +P+ +C D+ G +LA
Sbjct: 4 KSQENISL---PQGVLYCWG----DKFSGKPTFNPLIPNICFMDN-------GYNHSLAL 49
Query: 67 SESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+E+G+L WG D L+S K + P + V + G ++ E G
Sbjct: 50 TETGELYGWG---DNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMENG 106
Query: 124 EVYTWG 129
+Y WG
Sbjct: 107 LLYVWG 112
>sp|C5BBR6|URE1_EDWI9 Urease subunit alpha OS=Edwardsiella ictaluri (strain 93-146)
GN=ureC PE=3 SV=1
Length = 572
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 25/130 (19%)
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES-- 189
E + + V +D G F DS R GE ++ +T++A + +
Sbjct: 345 ETIAAENVLQDMGVISMFSSDSQAM-------------GRVGENWLRLIQTANAMKVARG 391
Query: 190 ---ENPASGDEFFTLSPCL-VTLNPGVK------ITKVAAGGRHTLILSGKSLESAEPKR 239
E+ A D F L +T+NP + I + G L+L A+PK
Sbjct: 392 KLPEDAAGNDNFRVLRYVAKITINPAIAQGVSHVIGSIEVGKMADLVLWDPRFFGAKPKM 451
Query: 240 LIFSGISSWS 249
+I G+ SWS
Sbjct: 452 VIKGGMISWS 461
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAG 112
D+ GG L ++SG + ++G D+ TS E+ P+ LP +A + +AG
Sbjct: 78 DISAGGM-HNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCI--SAG 134
Query: 113 WAHCVSVTEAGEVYTWG 129
+H + E G V+ WG
Sbjct: 135 DSHSACLLEDGRVFAWG 151
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 68 ESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
E G++ WGS D G LT G P L A+G H V +T AG+V+
Sbjct: 143 EDGRVFAWGSFRDSHGNMGLTI--DGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVF 200
Query: 127 TWGWRE 132
T G E
Sbjct: 201 TVGCAE 206
>sp|P0C5Y8|ALS2_RAT Alsin OS=Rattus norvegicus GN=Als2 PE=2 SV=1
Length = 1651
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+G TPE P +V++AA G H V +TE GEVY++G
Sbjct: 25 AGSFSLTPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFG 66
>sp|Q8IS20|GEFC_DICDI Ras guanine nucleotide exchange factor C OS=Dictyostelium
discoideum GN=gefC PE=2 SV=1
Length = 1457
Score = 32.7 bits (73), Expect = 2.4, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 21/98 (21%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G+L WG ++ G+ L TP V A H TE+G+
Sbjct: 428 ALTEWGELYMWG-INEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSSTHSACYTESGK 486
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+Y WG Q D TGK A+P+
Sbjct: 487 MYVWG--------------------QSDETGKIQAIPS 504
Score = 32.0 bits (71), Expect = 4.4, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 27/82 (32%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-------------------EASVV 107
+ESGK+ WG +D+ +GK P P P+ + +
Sbjct: 482 TESGKMYVWGQSDE-------TGKIQAIPSPLPIHSYLDREIKSPNGGGVGGFFGGGGKI 534
Query: 108 KAAAGWAHCVSV-TEAGEVYTW 128
K A C++V T+ GEV+ W
Sbjct: 535 KQLACGQRCIAVLTQMGEVFMW 556
>sp|Q920R0|ALS2_MOUSE Alsin OS=Mus musculus GN=Als2 PE=1 SV=3
Length = 1651
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+G TPE P +V++AA G H V +TE GEVY++G
Sbjct: 25 AGSFSLTPERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSFG 66
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 21/112 (18%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
E V+Y +P KS + I CG D F + +E+G++++ GS
Sbjct: 87 EEVLYF-------TPCKSLLGCAIQQVACGWD-----------FTIILTENGQVLSCGS- 127
Query: 79 DDEGQSYLTSG-KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ + G + P+ L E VV AAG H ++ T +G V+ WG
Sbjct: 128 NSFGQLGVPHGPRRCVIPQAIELLRE-KVVSIAAGLRHALAATASGTVFQWG 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,285,899
Number of Sequences: 539616
Number of extensions: 4566268
Number of successful extensions: 8967
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 8675
Number of HSP's gapped (non-prelim): 269
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)