Query 025336
Match_columns 254
No_of_seqs 144 out of 1789
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 04:49:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025336.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025336hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 4.4E-42 9.4E-47 274.0 21.3 236 2-254 93-337 (339)
2 KOG0022 Alcohol dehydrogenase, 100.0 9.9E-41 2.1E-45 257.3 21.9 249 3-254 126-375 (375)
3 COG0604 Qor NADPH:quinone redu 100.0 6.9E-41 1.5E-45 272.9 21.6 245 1-254 72-326 (326)
4 COG1062 AdhC Zn-dependent alco 100.0 4.8E-40 1E-44 257.3 21.9 237 12-254 128-366 (366)
5 KOG0024 Sorbitol dehydrogenase 100.0 1.1E-39 2.4E-44 253.1 23.0 246 1-254 76-352 (354)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 1.8E-38 3.8E-43 265.5 26.3 226 22-252 144-370 (371)
7 TIGR03451 mycoS_dep_FDH mycoth 100.0 4.6E-38 9.9E-43 261.9 26.4 230 21-254 128-358 (358)
8 PLN02740 Alcohol dehydrogenase 100.0 3.4E-37 7.4E-42 258.5 25.4 230 21-254 150-381 (381)
9 KOG1197 Predicted quinone oxid 100.0 2.4E-38 5.2E-43 237.3 16.1 242 1-253 79-329 (336)
10 TIGR02818 adh_III_F_hyde S-(hy 100.0 6.7E-37 1.5E-41 255.6 25.7 229 22-254 138-368 (368)
11 cd08239 THR_DH_like L-threonin 100.0 8.9E-37 1.9E-41 252.6 24.4 241 2-254 70-339 (339)
12 cd08300 alcohol_DH_class_III c 100.0 2.3E-36 4.9E-41 252.6 25.5 229 22-253 139-368 (368)
13 PLN02827 Alcohol dehydrogenase 100.0 3E-36 6.5E-41 252.2 25.9 230 22-254 146-376 (378)
14 cd08301 alcohol_DH_plants Plan 100.0 8.6E-36 1.9E-40 249.3 25.6 228 22-253 140-369 (369)
15 PRK09880 L-idonate 5-dehydroge 100.0 9.8E-36 2.1E-40 246.6 24.6 220 21-254 123-343 (343)
16 cd08277 liver_alcohol_DH_like 100.0 1.7E-35 3.7E-40 247.0 25.2 229 21-253 136-365 (365)
17 PRK10309 galactitol-1-phosphat 100.0 5.3E-35 1.2E-39 242.7 24.9 245 1-254 68-346 (347)
18 PLN03154 putative allyl alcoho 100.0 4.5E-35 9.7E-40 242.7 21.4 241 2-254 90-345 (348)
19 KOG0023 Alcohol dehydrogenase, 100.0 1.6E-34 3.6E-39 223.9 20.3 217 22-254 135-354 (360)
20 cd08233 butanediol_DH_like (2R 100.0 1.8E-33 3.8E-38 233.9 25.4 241 2-253 80-351 (351)
21 TIGR03201 dearomat_had 6-hydro 100.0 1.5E-33 3.2E-38 234.1 24.5 226 21-254 113-349 (349)
22 PLN02586 probable cinnamyl alc 100.0 1.3E-33 2.9E-38 234.9 24.0 217 21-254 135-353 (360)
23 cd08231 MDR_TM0436_like Hypoth 100.0 3.1E-33 6.8E-38 233.3 26.2 230 21-254 128-361 (361)
24 COG1063 Tdh Threonine dehydrog 100.0 3E-33 6.5E-38 230.9 24.7 246 2-254 89-350 (350)
25 PLN02178 cinnamyl-alcohol dehy 100.0 2.3E-33 5E-38 234.2 24.0 217 21-254 129-348 (375)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 2E-33 4.3E-38 231.2 22.9 229 1-252 71-328 (329)
27 TIGR03366 HpnZ_proposed putati 100.0 1.3E-33 2.9E-38 227.5 20.0 205 21-235 72-280 (280)
28 cd08295 double_bond_reductase_ 100.0 2.2E-33 4.7E-38 232.2 21.8 241 2-254 85-338 (338)
29 cd08291 ETR_like_1 2-enoyl thi 100.0 5.7E-33 1.2E-37 228.5 22.4 240 2-253 76-324 (324)
30 COG2130 Putative NADP-dependen 100.0 5.1E-33 1.1E-37 214.1 19.1 239 3-254 86-338 (340)
31 KOG1198 Zinc-binding oxidoredu 100.0 2.5E-33 5.3E-38 228.7 18.4 239 6-254 89-345 (347)
32 TIGR02819 fdhA_non_GSH formald 100.0 2.6E-32 5.5E-37 229.0 24.7 226 21-254 132-390 (393)
33 cd05279 Zn_ADH1 Liver alcohol 100.0 5.3E-32 1.2E-36 226.0 24.8 227 21-253 135-365 (365)
34 cd08278 benzyl_alcohol_DH Benz 100.0 6.1E-32 1.3E-36 225.6 25.1 227 21-253 138-365 (365)
35 PLN02514 cinnamyl-alcohol dehy 100.0 5.4E-32 1.2E-36 225.2 23.5 217 21-254 132-350 (357)
36 cd08299 alcohol_DH_class_I_II_ 100.0 2.9E-31 6.3E-36 222.0 26.0 230 21-254 142-373 (373)
37 TIGR01202 bchC 2-desacetyl-2-h 100.0 4.7E-32 1E-36 221.2 19.5 225 2-253 74-308 (308)
38 cd08230 glucose_DH Glucose deh 100.0 2.1E-31 4.5E-36 221.8 23.7 218 21-254 120-355 (355)
39 cd08285 NADP_ADH NADP(H)-depen 100.0 4.6E-31 1E-35 219.5 25.6 245 2-254 69-351 (351)
40 TIGR02825 B4_12hDH leukotriene 100.0 1.3E-31 2.9E-36 220.5 21.4 235 6-253 74-325 (325)
41 cd08292 ETR_like_2 2-enoyl thi 100.0 2.9E-31 6.3E-36 218.3 23.0 242 2-253 74-324 (324)
42 cd08238 sorbose_phosphate_red 100.0 3.2E-31 6.9E-36 224.3 23.3 247 1-254 77-368 (410)
43 cd08294 leukotriene_B4_DH_like 100.0 2.9E-31 6.4E-36 218.8 21.8 237 5-254 75-329 (329)
44 KOG0025 Zn2+-binding dehydroge 100.0 1.7E-31 3.7E-36 203.9 18.4 233 1-242 92-338 (354)
45 cd08293 PTGR2 Prostaglandin re 100.0 4.6E-31 1E-35 219.0 22.7 243 1-254 83-345 (345)
46 cd08279 Zn_ADH_class_III Class 100.0 1.9E-30 4.1E-35 216.7 26.3 228 21-252 134-362 (363)
47 cd08237 ribitol-5-phosphate_DH 100.0 1.8E-31 3.9E-36 220.7 19.6 228 6-254 76-339 (341)
48 cd08286 FDH_like_ADH2 formalde 100.0 4.5E-30 9.7E-35 213.1 25.4 244 1-254 69-345 (345)
49 cd08296 CAD_like Cinnamyl alco 100.0 2.7E-30 5.8E-35 213.4 23.9 235 2-253 70-333 (333)
50 cd05284 arabinose_DH_like D-ar 100.0 3.7E-30 8.1E-35 213.1 24.4 238 2-254 73-340 (340)
51 cd08246 crotonyl_coA_red croto 100.0 2.5E-30 5.5E-35 218.1 23.3 244 1-253 96-392 (393)
52 cd08263 Zn_ADH10 Alcohol dehyd 100.0 4.8E-30 1E-34 214.5 24.1 227 21-253 139-367 (367)
53 cd08283 FDH_like_1 Glutathione 100.0 1.9E-29 4.1E-34 212.1 25.2 226 21-254 135-386 (386)
54 cd08261 Zn_ADH7 Alcohol dehydr 100.0 2.8E-29 6E-34 207.7 25.7 240 2-254 69-337 (337)
55 cd08284 FDH_like_2 Glutathione 100.0 2.5E-29 5.4E-34 208.5 24.8 243 1-253 68-343 (344)
56 cd05282 ETR_like 2-enoyl thioe 100.0 1.2E-29 2.7E-34 208.5 22.5 244 1-253 71-323 (323)
57 cd08244 MDR_enoyl_red Possible 100.0 2.2E-29 4.7E-34 207.1 23.7 243 2-254 75-324 (324)
58 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.8E-29 6.1E-34 208.3 24.5 243 2-253 70-344 (345)
59 PRK10083 putative oxidoreducta 100.0 2.9E-29 6.3E-34 207.7 24.4 239 2-254 69-337 (339)
60 cd05278 FDH_like Formaldehyde 100.0 2.2E-29 4.8E-34 209.1 23.2 244 2-254 70-347 (347)
61 cd08235 iditol_2_DH_like L-idi 100.0 5E-29 1.1E-33 206.7 25.2 242 2-253 69-343 (343)
62 cd05285 sorbitol_DH Sorbitol d 100.0 3.5E-29 7.6E-34 207.6 24.2 240 2-253 70-342 (343)
63 cd08240 6_hydroxyhexanoate_dh_ 100.0 3.3E-29 7.2E-34 208.2 24.1 242 1-254 81-350 (350)
64 PTZ00354 alcohol dehydrogenase 100.0 2.2E-29 4.8E-34 207.9 22.9 244 1-253 73-327 (334)
65 cd08262 Zn_ADH8 Alcohol dehydr 100.0 4.1E-29 8.9E-34 207.0 24.3 241 2-253 79-341 (341)
66 cd08256 Zn_ADH2 Alcohol dehydr 100.0 5.6E-29 1.2E-33 206.9 24.4 239 2-252 78-350 (350)
67 TIGR01751 crot-CoA-red crotony 100.0 4.6E-29 1E-33 210.6 23.4 244 2-254 93-387 (398)
68 cd08265 Zn_ADH3 Alcohol dehydr 100.0 8.4E-29 1.8E-33 208.1 24.8 245 2-252 103-383 (384)
69 cd08297 CAD3 Cinnamyl alcohol 100.0 1.2E-28 2.6E-33 204.2 24.4 240 2-254 72-341 (341)
70 cd08274 MDR9 Medium chain dehy 100.0 6.4E-29 1.4E-33 206.5 22.1 237 2-254 93-350 (350)
71 cd08287 FDH_like_ADH3 formalde 100.0 2.1E-28 4.5E-33 203.1 24.9 244 1-254 68-345 (345)
72 cd08290 ETR 2-enoyl thioester 100.0 4.7E-29 1E-33 206.6 20.8 243 2-254 79-341 (341)
73 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.9E-28 4.1E-33 202.7 24.2 239 2-254 72-338 (338)
74 cd08236 sugar_DH NAD(P)-depend 100.0 2.3E-28 4.9E-33 202.7 24.3 243 2-252 68-343 (343)
75 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.7E-28 5.9E-33 199.6 24.5 242 2-252 67-311 (312)
76 TIGR00692 tdh L-threonine 3-de 100.0 3.4E-28 7.3E-33 201.5 24.2 242 2-254 71-340 (340)
77 cd05283 CAD1 Cinnamyl alcohol 100.0 2.7E-28 5.9E-33 201.7 22.3 215 21-253 122-337 (337)
78 PRK05396 tdh L-threonine 3-deh 100.0 6.8E-28 1.5E-32 199.7 24.6 241 2-254 73-340 (341)
79 TIGR02817 adh_fam_1 zinc-bindi 100.0 2.3E-28 5E-33 202.1 21.7 239 1-253 73-334 (336)
80 cd08282 PFDH_like Pseudomonas 100.0 1.6E-27 3.5E-32 199.7 26.0 223 22-254 125-375 (375)
81 PLN02702 L-idonate 5-dehydroge 100.0 1.3E-27 2.8E-32 199.7 24.8 243 2-254 89-364 (364)
82 PRK10754 quinone oxidoreductas 100.0 1.3E-28 2.9E-33 202.8 18.5 246 2-254 73-327 (327)
83 cd08232 idonate-5-DH L-idonate 100.0 1.4E-27 3E-32 197.7 24.2 237 2-254 69-339 (339)
84 cd05281 TDH Threonine dehydrog 100.0 1.3E-27 2.9E-32 198.0 24.0 241 2-254 73-341 (341)
85 PRK09422 ethanol-active dehydr 100.0 1.3E-27 2.7E-32 197.9 23.9 237 2-253 69-335 (338)
86 cd08270 MDR4 Medium chain dehy 100.0 6.5E-28 1.4E-32 196.8 21.0 234 2-254 67-305 (305)
87 KOG1202 Animal-type fatty acid 100.0 2.9E-29 6.2E-34 220.4 13.0 236 12-254 1495-1741(2376)
88 cd08234 threonine_DH_like L-th 100.0 2.4E-27 5.2E-32 195.9 23.9 238 2-252 68-333 (334)
89 cd05286 QOR2 Quinone oxidoredu 100.0 3E-27 6.4E-32 193.6 23.2 244 2-254 70-320 (320)
90 cd08289 MDR_yhfp_like Yhfp put 100.0 1.8E-27 3.8E-32 196.0 21.4 239 5-254 74-326 (326)
91 cd08242 MDR_like Medium chain 100.0 2.7E-27 5.8E-32 194.4 22.3 211 21-254 109-319 (319)
92 cd08276 MDR7 Medium chain dehy 100.0 4.5E-27 9.8E-32 194.2 23.8 242 2-254 73-336 (336)
93 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 3.6E-27 7.7E-32 194.1 22.2 238 5-254 74-325 (325)
94 cd08243 quinone_oxidoreductase 100.0 2.2E-27 4.7E-32 194.8 20.6 234 6-252 74-319 (320)
95 KOG1196 Predicted NAD-dependen 100.0 1.4E-27 3E-32 183.6 16.7 240 3-254 86-340 (343)
96 TIGR02823 oxido_YhdH putative 100.0 1.1E-26 2.5E-31 191.0 23.2 238 4-254 72-323 (323)
97 cd08249 enoyl_reductase_like e 100.0 1E-26 2.2E-31 192.5 22.5 236 2-254 70-339 (339)
98 cd08250 Mgc45594_like Mgc45594 100.0 6E-27 1.3E-31 193.1 20.9 240 2-253 76-329 (329)
99 cd05276 p53_inducible_oxidored 100.0 1.5E-26 3.3E-31 189.7 22.9 242 2-252 73-323 (323)
100 cd08251 polyketide_synthase po 100.0 1.2E-26 2.6E-31 188.9 21.6 240 2-252 53-303 (303)
101 PRK13771 putative alcohol dehy 100.0 1.3E-26 2.9E-31 191.4 21.1 234 2-254 70-333 (334)
102 smart00829 PKS_ER Enoylreducta 100.0 1.8E-26 3.9E-31 186.3 20.9 240 2-252 39-288 (288)
103 cd08253 zeta_crystallin Zeta-c 100.0 4E-26 8.6E-31 187.4 22.6 243 2-254 73-325 (325)
104 cd08255 2-desacetyl-2-hydroxye 100.0 2.8E-26 6.1E-31 184.7 21.1 231 1-252 35-277 (277)
105 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.7E-26 5.9E-31 187.3 21.1 206 2-218 71-306 (306)
106 cd08266 Zn_ADH_like1 Alcohol d 100.0 7.5E-26 1.6E-30 187.2 23.6 241 2-254 73-342 (342)
107 cd08259 Zn_ADH5 Alcohol dehydr 100.0 6.7E-26 1.5E-30 187.0 23.0 234 2-253 70-332 (332)
108 cd08252 AL_MDR Arginate lyase 99.9 8.8E-26 1.9E-30 186.7 23.6 241 2-253 75-336 (336)
109 TIGR02824 quinone_pig3 putativ 99.9 9.2E-26 2E-30 185.3 23.4 244 2-254 73-325 (325)
110 cd08245 CAD Cinnamyl alcohol d 99.9 7E-26 1.5E-30 186.9 21.9 233 2-252 69-330 (330)
111 cd05195 enoyl_red enoyl reduct 99.9 5E-26 1.1E-30 183.9 20.4 240 2-252 43-293 (293)
112 cd05288 PGDH Prostaglandin deh 99.9 4.4E-26 9.6E-31 187.9 20.2 233 7-252 83-329 (329)
113 cd08298 CAD2 Cinnamyl alcohol 99.9 1.4E-25 3.1E-30 184.9 22.4 227 2-252 74-329 (329)
114 cd08247 AST1_like AST1 is a cy 99.9 2.8E-25 6E-30 184.9 22.4 243 2-254 74-352 (352)
115 cd08272 MDR6 Medium chain dehy 99.9 2E-25 4.2E-30 183.5 21.3 238 2-254 73-326 (326)
116 cd08241 QOR1 Quinone oxidoredu 99.9 4.1E-25 8.9E-30 181.2 22.4 243 2-253 73-323 (323)
117 cd08288 MDR_yhdh Yhdh putative 99.9 5.1E-25 1.1E-29 181.3 22.2 238 4-254 73-324 (324)
118 cd08268 MDR2 Medium chain dehy 99.9 4.7E-25 1E-29 181.4 22.0 244 2-254 73-328 (328)
119 cd08264 Zn_ADH_like2 Alcohol d 99.9 2.7E-25 5.9E-30 183.0 20.5 226 2-250 70-324 (325)
120 cd05188 MDR Medium chain reduc 99.9 6.3E-25 1.4E-29 175.9 20.4 203 2-214 45-270 (271)
121 cd08271 MDR5 Medium chain dehy 99.9 7.7E-25 1.7E-29 180.0 19.3 239 2-254 72-325 (325)
122 cd08275 MDR3 Medium chain dehy 99.9 4.9E-24 1.1E-28 176.1 23.5 242 2-254 72-337 (337)
123 cd08273 MDR8 Medium chain dehy 99.9 1.5E-24 3.1E-29 179.0 20.0 237 2-252 73-330 (331)
124 cd08248 RTN4I1 Human Reticulon 99.9 7.9E-25 1.7E-29 182.0 18.0 237 2-253 89-350 (350)
125 cd08267 MDR1 Medium chain dehy 99.9 4E-24 8.7E-29 175.3 20.2 236 2-252 74-319 (319)
126 cd05289 MDR_like_2 alcohol deh 99.9 1.2E-23 2.6E-28 171.6 18.6 230 2-252 75-309 (309)
127 PF00107 ADH_zinc_N: Zinc-bind 99.9 4.9E-21 1.1E-25 136.7 12.9 130 80-217 1-130 (130)
128 cd00401 AdoHcyase S-adenosyl-L 99.6 2.8E-14 6E-19 118.9 17.0 174 58-253 189-375 (413)
129 PRK09424 pntA NAD(P) transhydr 99.6 5E-14 1.1E-18 120.2 12.3 156 67-227 162-339 (509)
130 PF13602 ADH_zinc_N_2: Zinc-bi 99.5 7.9E-15 1.7E-19 104.1 3.7 120 113-252 1-127 (127)
131 PRK11873 arsM arsenite S-adeno 98.8 2.2E-08 4.7E-13 80.5 9.2 162 64-242 72-246 (272)
132 TIGR00561 pntA NAD(P) transhyd 98.8 5.5E-08 1.2E-12 83.4 11.8 107 69-177 163-288 (511)
133 PRK05476 S-adenosyl-L-homocyst 98.7 9.1E-07 2E-11 74.6 14.3 105 56-177 197-303 (425)
134 PRK08306 dipicolinate synthase 98.6 1.1E-06 2.3E-11 71.3 12.8 111 69-196 151-261 (296)
135 TIGR00936 ahcY adenosylhomocys 98.5 3.3E-06 7.2E-11 70.8 13.1 93 67-176 192-285 (406)
136 cd05213 NAD_bind_Glutamyl_tRNA 98.4 2.2E-06 4.7E-11 70.1 8.6 108 33-154 139-251 (311)
137 PLN02494 adenosylhomocysteinas 98.4 9.4E-06 2E-10 68.9 12.4 92 68-176 252-344 (477)
138 PRK00517 prmA ribosomal protei 98.3 2.8E-05 6.1E-10 61.7 13.1 147 8-176 67-216 (250)
139 TIGR00518 alaDH alanine dehydr 98.2 2.1E-05 4.5E-10 65.9 11.2 98 70-177 167-271 (370)
140 PTZ00075 Adenosylhomocysteinas 98.1 4.4E-05 9.5E-10 65.0 11.7 93 67-176 251-344 (476)
141 TIGR02853 spore_dpaA dipicolin 98.1 8E-05 1.7E-09 60.2 12.6 95 69-177 150-244 (287)
142 PRK08324 short chain dehydroge 98.1 3.9E-05 8.4E-10 69.6 11.7 140 23-177 386-561 (681)
143 COG2518 Pcm Protein-L-isoaspar 98.1 2.9E-05 6.3E-10 58.7 8.3 119 42-174 47-170 (209)
144 PRK12771 putative glutamate sy 98.0 1.1E-05 2.3E-10 71.7 5.8 79 66-152 133-233 (564)
145 TIGR00406 prmA ribosomal prote 97.9 0.00011 2.5E-09 59.4 10.2 98 67-176 157-262 (288)
146 PRK00377 cbiT cobalt-precorrin 97.9 0.00024 5.3E-09 54.2 11.4 102 63-172 34-144 (198)
147 PF01488 Shikimate_DH: Shikima 97.9 4.8E-05 1E-09 54.3 6.7 95 69-175 11-111 (135)
148 PRK11705 cyclopropane fatty ac 97.9 0.00012 2.6E-09 61.6 9.6 113 50-174 148-268 (383)
149 COG2242 CobL Precorrin-6B meth 97.8 0.00033 7.1E-09 51.9 9.7 104 63-175 28-137 (187)
150 PRK00045 hemA glutamyl-tRNA re 97.8 0.00014 2.9E-09 62.3 8.9 74 68-153 180-254 (423)
151 PRK05786 fabG 3-ketoacyl-(acyl 97.7 0.00081 1.8E-08 52.7 12.0 104 69-176 4-138 (238)
152 COG4221 Short-chain alcohol de 97.7 0.00029 6.2E-09 54.5 8.5 80 69-151 5-91 (246)
153 PRK13943 protein-L-isoaspartat 97.7 0.00043 9.3E-09 56.7 9.9 101 63-172 74-179 (322)
154 PRK05693 short chain dehydroge 97.7 0.0013 2.7E-08 52.9 12.3 78 71-151 2-82 (274)
155 TIGR00438 rrmJ cell division p 97.7 0.0014 3E-08 49.6 11.7 101 64-173 27-146 (188)
156 PF12847 Methyltransf_18: Meth 97.6 0.00023 5E-09 48.8 6.7 93 69-172 1-110 (112)
157 COG0300 DltE Short-chain dehyd 97.6 0.0007 1.5E-08 53.6 9.4 80 68-151 4-94 (265)
158 PF13460 NAD_binding_10: NADH( 97.6 0.002 4.3E-08 48.3 11.5 93 73-176 1-100 (183)
159 TIGR01035 hemA glutamyl-tRNA r 97.5 0.0008 1.7E-08 57.4 9.9 78 64-153 174-252 (417)
160 COG1748 LYS9 Saccharopine dehy 97.5 0.0014 3E-08 54.8 10.7 96 71-175 2-101 (389)
161 COG3967 DltE Short-chain dehyd 97.5 0.00075 1.6E-08 50.7 8.1 77 69-151 4-88 (245)
162 COG2519 GCD14 tRNA(1-methylade 97.5 0.00083 1.8E-08 52.2 8.5 105 63-176 88-198 (256)
163 PRK12742 oxidoreductase; Provi 97.5 0.0036 7.8E-08 48.9 12.4 77 69-151 5-85 (237)
164 PRK13942 protein-L-isoaspartat 97.5 0.00036 7.8E-09 53.9 6.5 101 61-172 68-175 (212)
165 PRK04148 hypothetical protein; 97.5 0.00083 1.8E-08 47.3 7.6 96 66-172 13-108 (134)
166 PRK05993 short chain dehydroge 97.5 0.0015 3.1E-08 52.7 10.1 78 69-150 3-85 (277)
167 PF01135 PCMT: Protein-L-isoas 97.4 0.0003 6.5E-09 54.0 5.5 101 62-172 65-171 (209)
168 PF02826 2-Hacid_dh_C: D-isome 97.4 0.0014 3.1E-08 49.1 8.8 91 69-176 35-130 (178)
169 KOG1209 1-Acyl dihydroxyaceton 97.4 0.0037 8.1E-08 47.3 10.6 78 70-151 7-91 (289)
170 TIGR02469 CbiT precorrin-6Y C5 97.4 0.0024 5.2E-08 44.4 9.3 100 63-172 13-121 (124)
171 PF02353 CMAS: Mycolic acid cy 97.4 0.00019 4E-09 57.6 3.8 100 60-173 53-166 (273)
172 PRK08177 short chain dehydroge 97.4 0.0019 4.1E-08 50.3 9.5 77 71-151 2-81 (225)
173 PRK13944 protein-L-isoaspartat 97.4 0.0017 3.7E-08 49.9 8.9 100 62-172 65-172 (205)
174 PRK03369 murD UDP-N-acetylmura 97.4 0.0016 3.5E-08 56.8 9.7 73 67-152 9-81 (488)
175 TIGR00080 pimt protein-L-isoas 97.4 0.00066 1.4E-08 52.5 6.6 102 62-172 70-176 (215)
176 cd05311 NAD_bind_2_malic_enz N 97.3 0.0059 1.3E-07 47.6 11.8 94 68-175 23-130 (226)
177 PLN03209 translocon at the inn 97.3 0.0042 9.1E-08 54.6 11.9 47 63-110 73-120 (576)
178 PRK00107 gidB 16S rRNA methylt 97.3 0.0017 3.6E-08 49.0 8.0 98 67-174 43-146 (187)
179 PF11017 DUF2855: Protein of u 97.3 0.011 2.4E-07 47.9 12.7 97 69-176 135-234 (314)
180 PRK07402 precorrin-6B methylas 97.3 0.0086 1.9E-07 45.6 11.7 103 62-174 33-143 (196)
181 PF08704 GCD14: tRNA methyltra 97.3 0.001 2.2E-08 52.3 6.6 109 60-175 31-148 (247)
182 PRK07060 short chain dehydroge 97.3 0.0025 5.4E-08 50.1 9.0 77 69-151 8-87 (245)
183 PRK07806 short chain dehydroge 97.3 0.0082 1.8E-07 47.3 12.0 102 69-174 5-135 (248)
184 PRK06139 short chain dehydroge 97.2 0.0016 3.5E-08 53.8 8.2 80 69-151 6-94 (330)
185 PF00670 AdoHcyase_NAD: S-aden 97.2 0.0046 9.9E-08 45.1 9.3 92 67-175 20-112 (162)
186 TIGR02356 adenyl_thiF thiazole 97.2 0.0064 1.4E-07 46.6 10.7 36 69-104 20-55 (202)
187 PF06325 PrmA: Ribosomal prote 97.2 0.0045 9.8E-08 50.1 10.2 133 24-177 120-263 (295)
188 COG2230 Cfa Cyclopropane fatty 97.2 0.0014 2.9E-08 52.3 6.9 105 56-177 59-180 (283)
189 PRK00811 spermidine synthase; 97.2 0.0022 4.8E-08 51.8 8.4 98 69-173 76-191 (283)
190 KOG1205 Predicted dehydrogenas 97.2 0.011 2.4E-07 47.3 11.9 106 69-177 11-153 (282)
191 COG4122 Predicted O-methyltran 97.2 0.0056 1.2E-07 47.1 9.8 103 64-172 54-165 (219)
192 COG1179 Dinucleotide-utilizing 97.2 0.0048 1E-07 47.6 9.2 104 69-177 29-157 (263)
193 PLN02366 spermidine synthase 97.2 0.005 1.1E-07 50.3 10.0 103 68-173 90-206 (308)
194 PRK06182 short chain dehydroge 97.2 0.0045 9.8E-08 49.6 9.8 79 70-151 3-84 (273)
195 PRK07502 cyclohexadienyl dehyd 97.1 0.0047 1E-07 50.6 9.7 92 71-175 7-102 (307)
196 PRK12939 short chain dehydroge 97.1 0.0085 1.8E-07 47.2 11.0 80 69-151 6-94 (250)
197 PRK07326 short chain dehydroge 97.1 0.0096 2.1E-07 46.5 11.1 80 69-151 5-92 (237)
198 PLN02781 Probable caffeoyl-CoA 97.1 0.0049 1.1E-07 48.4 9.1 104 63-171 62-176 (234)
199 COG0169 AroE Shikimate 5-dehyd 97.1 0.0021 4.5E-08 51.6 7.1 44 69-112 125-168 (283)
200 cd01080 NAD_bind_m-THF_DH_Cycl 97.1 0.0093 2E-07 44.1 10.0 98 47-176 21-119 (168)
201 PRK07904 short chain dehydroge 97.1 0.0061 1.3E-07 48.4 9.8 82 67-151 5-97 (253)
202 PRK06057 short chain dehydroge 97.1 0.0038 8.2E-08 49.5 8.5 80 69-151 6-89 (255)
203 PRK08339 short chain dehydroge 97.1 0.0047 1E-07 49.3 9.0 80 69-151 7-95 (263)
204 PRK13940 glutamyl-tRNA reducta 97.1 0.0042 9.1E-08 52.9 9.0 75 68-153 179-254 (414)
205 PRK08017 oxidoreductase; Provi 97.1 0.0046 1E-07 48.9 8.9 77 71-151 3-84 (256)
206 PF01262 AlaDh_PNT_C: Alanine 97.1 0.0031 6.7E-08 46.8 7.3 104 70-177 20-143 (168)
207 cd01075 NAD_bind_Leu_Phe_Val_D 97.1 0.016 3.5E-07 44.3 11.4 108 69-196 27-137 (200)
208 PRK08261 fabG 3-ketoacyl-(acyl 97.1 0.01 2.2E-07 51.4 11.5 79 69-151 209-294 (450)
209 PRK00536 speE spermidine synth 97.0 0.0025 5.4E-08 50.5 7.0 98 69-174 72-172 (262)
210 PRK07109 short chain dehydroge 97.0 0.01 2.2E-07 49.3 10.9 80 69-151 7-95 (334)
211 PF03435 Saccharop_dh: Sacchar 97.0 0.0053 1.2E-07 52.0 9.5 90 73-171 1-96 (386)
212 PRK08265 short chain dehydroge 97.0 0.015 3.2E-07 46.4 11.5 80 69-151 5-90 (261)
213 PRK12549 shikimate 5-dehydroge 97.0 0.0086 1.9E-07 48.4 10.1 42 69-110 126-167 (284)
214 COG2264 PrmA Ribosomal protein 97.0 0.0079 1.7E-07 48.4 9.6 140 23-177 120-267 (300)
215 PRK04457 spermidine synthase; 97.0 0.0098 2.1E-07 47.5 10.1 94 68-171 65-175 (262)
216 cd00755 YgdL_like Family of ac 97.0 0.007 1.5E-07 47.3 9.0 35 70-104 11-45 (231)
217 COG2226 UbiE Methylase involve 97.0 0.0097 2.1E-07 46.5 9.7 108 61-177 43-160 (238)
218 PRK15116 sulfur acceptor prote 97.0 0.017 3.8E-07 46.0 11.2 36 69-104 29-64 (268)
219 PRK05872 short chain dehydroge 97.0 0.0043 9.3E-08 50.5 8.1 80 69-151 8-95 (296)
220 PRK14967 putative methyltransf 97.0 0.024 5.2E-07 44.1 11.9 100 63-174 30-160 (223)
221 PRK06500 short chain dehydroge 97.0 0.017 3.7E-07 45.4 11.3 80 69-151 5-90 (249)
222 PRK11207 tellurite resistance 97.0 0.0035 7.7E-08 47.8 7.0 99 63-173 24-134 (197)
223 PRK06949 short chain dehydroge 97.0 0.0056 1.2E-07 48.6 8.5 80 69-151 8-96 (258)
224 PF00899 ThiF: ThiF family; I 97.0 0.0057 1.2E-07 43.6 7.7 35 70-104 2-36 (135)
225 PRK08217 fabG 3-ketoacyl-(acyl 97.0 0.007 1.5E-07 47.7 8.9 79 69-150 4-91 (253)
226 PRK06953 short chain dehydroge 96.9 0.009 2E-07 46.3 9.3 77 71-151 2-80 (222)
227 PRK07825 short chain dehydroge 96.9 0.0058 1.3E-07 49.0 8.5 79 70-151 5-88 (273)
228 PLN02476 O-methyltransferase 96.9 0.0089 1.9E-07 47.9 9.2 104 63-171 112-226 (278)
229 PRK07831 short chain dehydroge 96.9 0.0075 1.6E-07 48.0 9.0 82 67-151 14-107 (262)
230 PF13241 NAD_binding_7: Putati 96.9 0.0094 2E-07 40.3 8.0 90 69-177 6-95 (103)
231 PRK08261 fabG 3-ketoacyl-(acyl 96.9 0.0038 8.2E-08 54.0 7.6 95 63-177 27-127 (450)
232 PRK09072 short chain dehydroge 96.9 0.0084 1.8E-07 47.8 9.1 80 69-151 4-90 (263)
233 PRK12829 short chain dehydroge 96.9 0.0051 1.1E-07 48.9 7.8 81 68-151 9-96 (264)
234 COG0421 SpeE Spermidine syntha 96.9 0.016 3.4E-07 46.6 10.4 98 71-172 78-189 (282)
235 COG0686 Ald Alanine dehydrogen 96.9 0.005 1.1E-07 49.3 7.3 98 71-177 169-272 (371)
236 TIGR03325 BphB_TodD cis-2,3-di 96.9 0.0051 1.1E-07 49.0 7.7 79 69-150 4-88 (262)
237 PRK07231 fabG 3-ketoacyl-(acyl 96.9 0.0066 1.4E-07 47.9 8.1 80 69-151 4-91 (251)
238 TIGR02355 moeB molybdopterin s 96.9 0.0077 1.7E-07 47.4 8.3 35 70-104 24-58 (240)
239 TIGR01318 gltD_gamma_fam gluta 96.9 0.0065 1.4E-07 52.8 8.7 77 69-152 140-237 (467)
240 PRK06398 aldose dehydrogenase; 96.9 0.0048 1E-07 49.1 7.2 76 69-151 5-82 (258)
241 PRK00258 aroE shikimate 5-dehy 96.9 0.0066 1.4E-07 49.0 8.1 94 68-172 121-220 (278)
242 PRK01581 speE spermidine synth 96.8 0.014 3E-07 48.4 9.8 103 68-174 149-269 (374)
243 TIGR01809 Shik-DH-AROM shikima 96.8 0.0049 1.1E-07 49.8 7.2 76 69-152 124-201 (282)
244 cd01065 NAD_bind_Shikimate_DH 96.8 0.0096 2.1E-07 43.3 8.3 96 68-175 17-118 (155)
245 PRK06200 2,3-dihydroxy-2,3-dih 96.8 0.01 2.2E-07 47.3 9.1 80 69-151 5-90 (263)
246 COG2910 Putative NADH-flavin r 96.8 0.012 2.6E-07 43.6 8.4 95 72-176 2-107 (211)
247 PRK06484 short chain dehydroge 96.8 0.02 4.2E-07 50.6 11.6 105 69-177 268-404 (520)
248 PRK06101 short chain dehydroge 96.8 0.024 5.2E-07 44.5 11.0 75 71-150 2-80 (240)
249 PLN02780 ketoreductase/ oxidor 96.8 0.0075 1.6E-07 49.7 8.4 81 69-151 52-142 (320)
250 PF03446 NAD_binding_2: NAD bi 96.8 0.024 5.2E-07 41.8 10.3 88 72-175 3-96 (163)
251 PRK05866 short chain dehydroge 96.8 0.011 2.3E-07 48.2 9.0 80 69-151 39-127 (293)
252 PRK07814 short chain dehydroge 96.8 0.009 2E-07 47.6 8.5 79 69-151 9-97 (263)
253 PRK14027 quinate/shikimate deh 96.8 0.015 3.3E-07 46.9 9.7 43 69-111 126-168 (283)
254 PF01596 Methyltransf_3: O-met 96.8 0.0038 8.1E-08 47.8 5.9 103 65-172 41-154 (205)
255 PRK07832 short chain dehydroge 96.8 0.037 7.9E-07 44.4 12.0 77 72-151 2-88 (272)
256 PRK08762 molybdopterin biosynt 96.8 0.016 3.4E-07 49.0 10.1 35 69-103 134-168 (376)
257 PRK06505 enoyl-(acyl carrier p 96.8 0.01 2.2E-07 47.7 8.6 80 69-151 6-95 (271)
258 PRK06196 oxidoreductase; Provi 96.8 0.011 2.4E-07 48.6 9.0 80 69-151 25-109 (315)
259 PRK05690 molybdopterin biosynt 96.8 0.014 2.9E-07 46.2 9.1 36 69-104 31-66 (245)
260 PRK06940 short chain dehydroge 96.8 0.03 6.4E-07 45.1 11.3 78 70-151 2-86 (275)
261 PRK05867 short chain dehydroge 96.8 0.01 2.2E-07 47.0 8.5 80 69-151 8-96 (253)
262 PRK07533 enoyl-(acyl carrier p 96.8 0.012 2.7E-07 46.7 9.0 80 69-151 9-98 (258)
263 PRK12475 thiamine/molybdopteri 96.8 0.011 2.5E-07 48.9 8.9 36 69-104 23-58 (338)
264 PRK01683 trans-aconitate 2-met 96.8 0.02 4.3E-07 45.6 10.1 99 63-173 25-130 (258)
265 PRK14175 bifunctional 5,10-met 96.8 0.025 5.4E-07 45.5 10.4 95 49-176 137-233 (286)
266 PRK06180 short chain dehydroge 96.8 0.015 3.2E-07 46.8 9.4 79 70-151 4-88 (277)
267 cd00757 ThiF_MoeB_HesA_family 96.8 0.021 4.5E-07 44.6 10.0 35 70-104 21-55 (228)
268 TIGR01470 cysG_Nterm siroheme 96.8 0.012 2.7E-07 45.0 8.5 92 69-173 8-100 (205)
269 PRK12809 putative oxidoreducta 96.7 0.011 2.5E-07 53.4 9.4 77 69-152 309-406 (639)
270 PRK09291 short chain dehydroge 96.7 0.011 2.4E-07 46.8 8.4 73 70-150 2-82 (257)
271 cd01483 E1_enzyme_family Super 96.7 0.019 4.1E-07 41.3 8.9 33 72-104 1-33 (143)
272 TIGR01832 kduD 2-deoxy-D-gluco 96.7 0.014 3E-07 46.0 8.9 80 69-151 4-90 (248)
273 CHL00194 ycf39 Ycf39; Provisio 96.7 0.013 2.8E-07 48.2 9.0 94 72-175 2-111 (317)
274 PRK06841 short chain dehydroge 96.7 0.012 2.5E-07 46.7 8.5 80 69-151 14-99 (255)
275 PRK08594 enoyl-(acyl carrier p 96.7 0.048 1E-06 43.4 11.9 79 69-150 6-96 (257)
276 PLN02589 caffeoyl-CoA O-methyl 96.7 0.022 4.7E-07 45.0 9.6 103 64-171 74-188 (247)
277 PF03807 F420_oxidored: NADP o 96.7 0.033 7.1E-07 36.9 9.2 76 72-162 1-81 (96)
278 PF02670 DXP_reductoisom: 1-de 96.7 0.049 1.1E-06 38.3 10.2 88 73-165 1-114 (129)
279 cd01492 Aos1_SUMO Ubiquitin ac 96.7 0.018 3.9E-07 43.9 8.7 36 69-104 20-55 (197)
280 PRK08862 short chain dehydroge 96.7 0.018 3.8E-07 45.0 8.9 79 69-150 4-92 (227)
281 PRK07688 thiamine/molybdopteri 96.6 0.017 3.6E-07 48.0 9.1 36 69-104 23-58 (339)
282 PRK07574 formate dehydrogenase 96.6 0.04 8.7E-07 46.4 11.4 45 69-114 191-235 (385)
283 PRK06128 oxidoreductase; Provi 96.6 0.031 6.8E-07 45.5 10.6 80 69-151 54-144 (300)
284 PRK08267 short chain dehydroge 96.6 0.015 3.3E-07 46.2 8.6 78 71-151 2-87 (260)
285 PRK07677 short chain dehydroge 96.6 0.013 2.8E-07 46.4 8.2 79 70-151 1-88 (252)
286 PRK07062 short chain dehydroge 96.6 0.014 3.1E-07 46.5 8.4 80 69-151 7-97 (265)
287 PRK05653 fabG 3-ketoacyl-(acyl 96.6 0.018 3.9E-07 45.1 8.8 79 70-151 5-92 (246)
288 PRK12548 shikimate 5-dehydroge 96.6 0.027 5.8E-07 45.7 9.9 36 69-104 125-160 (289)
289 PRK12828 short chain dehydroge 96.6 0.017 3.7E-07 45.0 8.6 80 69-151 6-92 (239)
290 PLN02823 spermine synthase 96.6 0.021 4.5E-07 47.2 9.3 100 69-172 103-219 (336)
291 PRK12367 short chain dehydroge 96.6 0.019 4.1E-07 45.4 8.8 73 69-151 13-89 (245)
292 PRK06194 hypothetical protein; 96.6 0.013 2.9E-07 47.3 8.1 79 70-151 6-93 (287)
293 cd05211 NAD_bind_Glu_Leu_Phe_V 96.6 0.048 1E-06 42.2 10.7 36 69-104 22-57 (217)
294 PRK06718 precorrin-2 dehydroge 96.6 0.012 2.5E-07 45.1 7.2 91 69-173 9-100 (202)
295 TIGR00446 nop2p NOL1/NOP2/sun 96.6 0.078 1.7E-06 42.4 12.3 102 64-174 66-200 (264)
296 PF02558 ApbA: Ketopantoate re 96.6 0.0073 1.6E-07 43.8 5.9 99 73-177 1-105 (151)
297 cd01078 NAD_bind_H4MPT_DH NADP 96.6 0.07 1.5E-06 40.5 11.5 75 69-152 27-108 (194)
298 PRK08223 hypothetical protein; 96.6 0.019 4.1E-07 46.2 8.5 36 69-104 26-61 (287)
299 TIGR00507 aroE shikimate 5-deh 96.6 0.023 5.1E-07 45.6 9.2 92 68-174 115-215 (270)
300 KOG4022 Dihydropteridine reduc 96.5 0.021 4.5E-07 41.4 7.7 75 71-151 4-82 (236)
301 PRK08263 short chain dehydroge 96.5 0.048 1E-06 43.8 11.1 79 70-151 3-87 (275)
302 PRK12769 putative oxidoreducta 96.5 0.017 3.6E-07 52.5 9.1 76 69-151 326-422 (654)
303 COG2227 UbiG 2-polyprenyl-3-me 96.5 0.031 6.7E-07 43.3 9.2 96 69-174 59-162 (243)
304 PRK12429 3-hydroxybutyrate deh 96.5 0.056 1.2E-06 42.7 11.3 80 69-151 3-91 (258)
305 PRK08264 short chain dehydroge 96.5 0.023 4.9E-07 44.5 8.9 75 69-151 5-83 (238)
306 PRK08328 hypothetical protein; 96.5 0.044 9.5E-07 42.9 10.3 36 69-104 26-61 (231)
307 PRK13394 3-hydroxybutyrate deh 96.5 0.017 3.6E-07 45.9 8.2 80 69-151 6-94 (262)
308 PRK08340 glucose-1-dehydrogena 96.5 0.023 5E-07 45.2 9.0 77 72-151 2-86 (259)
309 PLN03139 formate dehydrogenase 96.5 0.049 1.1E-06 45.9 11.1 45 69-114 198-242 (386)
310 PRK08703 short chain dehydroge 96.5 0.022 4.8E-07 44.6 8.8 81 69-151 5-97 (239)
311 PRK14103 trans-aconitate 2-met 96.5 0.043 9.3E-07 43.6 10.3 96 63-172 23-125 (255)
312 PRK06198 short chain dehydroge 96.5 0.026 5.7E-07 44.8 9.1 81 69-151 5-94 (260)
313 PRK07576 short chain dehydroge 96.5 0.023 5.1E-07 45.3 8.8 79 69-150 8-95 (264)
314 PRK06483 dihydromonapterin red 96.5 0.032 7E-07 43.6 9.4 79 70-151 2-84 (236)
315 TIGR00138 gidB 16S rRNA methyl 96.5 0.025 5.4E-07 42.5 8.3 95 69-173 42-142 (181)
316 PRK07478 short chain dehydroge 96.5 0.022 4.8E-07 45.1 8.6 80 69-151 5-93 (254)
317 PRK07024 short chain dehydroge 96.5 0.021 4.5E-07 45.4 8.4 79 70-151 2-88 (257)
318 PRK07454 short chain dehydroge 96.5 0.028 6.1E-07 44.1 9.1 80 69-151 5-93 (241)
319 PRK06079 enoyl-(acyl carrier p 96.5 0.017 3.8E-07 45.7 7.9 79 69-150 6-92 (252)
320 PRK08213 gluconate 5-dehydroge 96.5 0.024 5.1E-07 45.0 8.7 80 69-151 11-99 (259)
321 TIGR00477 tehB tellurite resis 96.5 0.013 2.8E-07 44.6 6.8 97 63-172 24-132 (195)
322 PRK07577 short chain dehydroge 96.4 0.021 4.6E-07 44.5 8.3 74 70-151 3-78 (234)
323 KOG1201 Hydroxysteroid 17-beta 96.4 0.02 4.2E-07 45.8 7.8 78 69-151 37-124 (300)
324 PRK06701 short chain dehydroge 96.4 0.056 1.2E-06 43.9 10.9 80 69-151 45-134 (290)
325 PRK00312 pcm protein-L-isoaspa 96.4 0.016 3.5E-07 44.7 7.4 101 63-174 72-176 (212)
326 PRK05717 oxidoreductase; Valid 96.4 0.025 5.4E-07 44.8 8.6 80 69-151 9-94 (255)
327 PRK06114 short chain dehydroge 96.4 0.033 7.2E-07 44.1 9.4 80 69-151 7-96 (254)
328 PRK05597 molybdopterin biosynt 96.4 0.037 8E-07 46.3 9.9 36 69-104 27-62 (355)
329 TIGR02354 thiF_fam2 thiamine b 96.4 0.019 4.2E-07 43.8 7.6 35 69-103 20-54 (200)
330 PF00106 adh_short: short chai 96.4 0.012 2.6E-07 43.3 6.3 78 72-151 2-90 (167)
331 PRK05884 short chain dehydroge 96.4 0.025 5.5E-07 43.9 8.4 74 72-150 2-78 (223)
332 PF02254 TrkA_N: TrkA-N domain 96.4 0.11 2.3E-06 35.7 10.8 92 73-172 1-95 (116)
333 PRK08690 enoyl-(acyl carrier p 96.4 0.026 5.6E-07 45.0 8.6 80 69-151 5-94 (261)
334 PRK06138 short chain dehydroge 96.4 0.026 5.7E-07 44.5 8.6 80 69-151 4-91 (252)
335 PRK05875 short chain dehydroge 96.4 0.026 5.5E-07 45.3 8.6 79 69-150 6-95 (276)
336 PRK08628 short chain dehydroge 96.4 0.022 4.7E-07 45.2 8.1 80 69-151 6-93 (258)
337 PRK05600 thiamine biosynthesis 96.4 0.018 3.8E-07 48.4 7.8 36 69-104 40-75 (370)
338 PRK04266 fibrillarin; Provisio 96.4 0.072 1.6E-06 41.5 10.7 102 63-172 66-175 (226)
339 PRK08317 hypothetical protein; 96.4 0.019 4.1E-07 44.9 7.7 102 62-174 12-125 (241)
340 TIGR03840 TMPT_Se_Te thiopurin 96.4 0.026 5.6E-07 43.6 8.1 104 67-174 32-153 (213)
341 PRK07523 gluconate 5-dehydroge 96.4 0.025 5.5E-07 44.8 8.4 80 69-151 9-97 (255)
342 PRK06125 short chain dehydroge 96.4 0.038 8.2E-07 43.9 9.4 77 69-151 6-91 (259)
343 PRK06181 short chain dehydroge 96.4 0.026 5.6E-07 44.9 8.5 78 71-151 2-88 (263)
344 PRK06179 short chain dehydroge 96.4 0.016 3.4E-07 46.4 7.2 77 70-151 4-83 (270)
345 PRK06720 hypothetical protein; 96.3 0.042 9E-07 40.8 8.8 80 69-151 15-103 (169)
346 PRK15469 ghrA bifunctional gly 96.3 0.063 1.4E-06 44.0 10.6 90 69-176 135-229 (312)
347 PRK06172 short chain dehydroge 96.3 0.021 4.5E-07 45.2 7.7 80 69-151 6-94 (253)
348 PRK07411 hypothetical protein; 96.3 0.019 4E-07 48.7 7.7 36 69-104 37-72 (390)
349 PRK05876 short chain dehydroge 96.3 0.047 1E-06 43.9 9.8 80 69-151 5-93 (275)
350 PRK07890 short chain dehydroge 96.3 0.022 4.7E-07 45.2 7.7 80 69-151 4-92 (258)
351 PRK07774 short chain dehydroge 96.3 0.031 6.7E-07 44.0 8.6 80 69-151 5-93 (250)
352 PRK06603 enoyl-(acyl carrier p 96.3 0.03 6.5E-07 44.6 8.6 79 69-150 7-95 (260)
353 PRK13243 glyoxylate reductase; 96.3 0.073 1.6E-06 44.1 11.0 37 69-106 149-185 (333)
354 COG4106 Tam Trans-aconitate me 96.3 0.033 7.1E-07 42.5 8.0 99 63-172 24-128 (257)
355 PRK07063 short chain dehydroge 96.3 0.03 6.5E-07 44.5 8.6 80 69-151 6-96 (260)
356 PRK08277 D-mannonate oxidoredu 96.3 0.032 6.9E-07 44.8 8.7 79 69-150 9-96 (278)
357 PRK07878 molybdopterin biosynt 96.3 0.025 5.4E-07 48.0 8.3 36 69-104 41-76 (392)
358 PRK12747 short chain dehydroge 96.3 0.13 2.8E-06 40.6 12.0 105 69-177 3-148 (252)
359 PRK08643 acetoin reductase; Va 96.3 0.032 7E-07 44.1 8.6 79 70-151 2-89 (256)
360 PRK06482 short chain dehydroge 96.3 0.038 8.3E-07 44.3 9.1 78 71-151 3-86 (276)
361 PRK05854 short chain dehydroge 96.3 0.036 7.9E-07 45.5 9.1 80 69-151 13-103 (313)
362 PRK08219 short chain dehydroge 96.3 0.092 2E-06 40.6 11.0 74 71-151 4-81 (227)
363 PLN02244 tocopherol O-methyltr 96.3 0.015 3.3E-07 48.4 6.8 98 68-174 117-224 (340)
364 cd01487 E1_ThiF_like E1_ThiF_l 96.3 0.063 1.4E-06 40.1 9.5 33 72-104 1-33 (174)
365 PRK08287 cobalt-precorrin-6Y C 96.3 0.074 1.6E-06 40.1 10.1 98 63-173 25-131 (187)
366 TIGR03215 ac_ald_DH_ac acetald 96.3 0.065 1.4E-06 43.2 10.1 87 72-172 3-93 (285)
367 PRK12384 sorbitol-6-phosphate 96.3 0.03 6.6E-07 44.4 8.4 79 70-151 2-91 (259)
368 PRK07453 protochlorophyllide o 96.3 0.033 7.1E-07 45.9 8.8 79 69-150 5-92 (322)
369 TIGR01505 tartro_sem_red 2-hyd 96.3 0.058 1.3E-06 43.8 10.1 43 72-115 1-43 (291)
370 PTZ00098 phosphoethanolamine N 96.3 0.046 1E-06 43.7 9.3 104 61-174 44-157 (263)
371 KOG2018 Predicted dinucleotide 96.3 0.032 6.9E-07 44.8 8.0 94 69-167 73-190 (430)
372 PRK06197 short chain dehydroge 96.3 0.034 7.5E-07 45.4 8.8 80 69-151 15-105 (306)
373 PRK08618 ornithine cyclodeamin 96.3 0.11 2.4E-06 43.0 11.7 102 68-184 125-232 (325)
374 PRK14192 bifunctional 5,10-met 96.3 0.068 1.5E-06 43.1 10.2 76 68-175 157-233 (283)
375 PRK07417 arogenate dehydrogena 96.3 0.046 1E-06 44.1 9.4 88 72-174 2-92 (279)
376 PRK07985 oxidoreductase; Provi 96.2 0.1 2.3E-06 42.4 11.5 80 69-151 48-138 (294)
377 TIGR00563 rsmB ribosomal RNA s 96.2 0.058 1.3E-06 46.4 10.4 103 63-174 232-369 (426)
378 PRK12481 2-deoxy-D-gluconate 3 96.2 0.051 1.1E-06 43.0 9.4 80 69-151 7-93 (251)
379 PLN03075 nicotianamine synthas 96.2 0.029 6.4E-07 45.3 7.9 98 69-173 123-233 (296)
380 PRK06914 short chain dehydroge 96.2 0.037 8.1E-07 44.5 8.8 78 70-151 3-91 (280)
381 PRK12746 short chain dehydroge 96.2 0.092 2E-06 41.5 10.9 79 70-151 6-100 (254)
382 PRK08644 thiamine biosynthesis 96.2 0.039 8.4E-07 42.6 8.4 35 69-103 27-61 (212)
383 PRK00121 trmB tRNA (guanine-N( 96.2 0.1 2.2E-06 40.0 10.7 100 69-174 40-157 (202)
384 cd01485 E1-1_like Ubiquitin ac 96.2 0.061 1.3E-06 41.0 9.4 34 70-103 19-52 (198)
385 PRK08415 enoyl-(acyl carrier p 96.2 0.039 8.5E-07 44.4 8.8 105 69-177 4-147 (274)
386 PRK06719 precorrin-2 dehydroge 96.2 0.17 3.7E-06 37.1 11.3 82 69-165 12-93 (157)
387 PRK11036 putative S-adenosyl-L 96.2 0.034 7.3E-07 44.3 8.3 93 68-172 43-148 (255)
388 PRK06153 hypothetical protein; 96.2 0.023 5E-07 47.4 7.4 35 69-103 175-209 (393)
389 PRK05447 1-deoxy-D-xylulose 5- 96.2 0.096 2.1E-06 43.9 11.0 95 71-171 2-120 (385)
390 PRK08085 gluconate 5-dehydroge 96.2 0.053 1.1E-06 42.9 9.4 80 69-151 8-96 (254)
391 PRK01438 murD UDP-N-acetylmura 96.2 0.053 1.1E-06 47.4 10.1 69 69-151 15-88 (480)
392 TIGR03206 benzo_BadH 2-hydroxy 96.2 0.039 8.4E-07 43.4 8.6 79 69-150 2-89 (250)
393 PRK07035 short chain dehydroge 96.2 0.038 8.1E-07 43.7 8.5 80 69-151 7-95 (252)
394 PRK08589 short chain dehydroge 96.2 0.036 7.9E-07 44.4 8.5 79 69-151 5-92 (272)
395 PRK10258 biotin biosynthesis p 96.2 0.18 3.9E-06 39.9 12.3 100 63-175 36-142 (251)
396 PRK07984 enoyl-(acyl carrier p 96.2 0.051 1.1E-06 43.4 9.2 79 69-150 5-93 (262)
397 PLN02657 3,8-divinyl protochlo 96.2 0.044 9.6E-07 46.5 9.2 82 65-151 55-146 (390)
398 PRK08220 2,3-dihydroxybenzoate 96.2 0.088 1.9E-06 41.5 10.5 75 69-151 7-86 (252)
399 PRK09186 flagellin modificatio 96.2 0.049 1.1E-06 43.0 9.1 79 69-150 3-92 (256)
400 PRK12937 short chain dehydroge 96.1 0.12 2.6E-06 40.5 11.1 80 69-151 4-93 (245)
401 PF05368 NmrA: NmrA-like famil 96.1 0.045 9.7E-07 42.8 8.6 69 73-150 1-73 (233)
402 KOG3201 Uncharacterized conser 96.1 0.012 2.7E-07 42.5 4.7 117 54-177 15-144 (201)
403 PRK09242 tropinone reductase; 96.1 0.052 1.1E-06 43.0 9.0 80 69-151 8-98 (257)
404 KOG1610 Corticosteroid 11-beta 96.1 0.11 2.4E-06 41.9 10.5 108 69-177 28-168 (322)
405 PLN00016 RNA-binding protein; 96.1 0.085 1.8E-06 44.6 10.7 97 70-175 52-166 (378)
406 COG0373 HemA Glutamyl-tRNA red 96.1 0.055 1.2E-06 45.7 9.3 96 69-176 177-277 (414)
407 PRK14618 NAD(P)H-dependent gly 96.1 0.072 1.6E-06 44.1 10.1 95 71-174 5-105 (328)
408 PRK08300 acetaldehyde dehydrog 96.1 0.054 1.2E-06 43.9 8.9 92 71-172 5-100 (302)
409 TIGR02752 MenG_heptapren 2-hep 96.1 0.031 6.8E-07 43.6 7.5 102 63-175 39-153 (231)
410 PRK07791 short chain dehydroge 96.1 0.065 1.4E-06 43.4 9.6 80 69-151 5-102 (286)
411 PRK12826 3-ketoacyl-(acyl-carr 96.1 0.029 6.2E-07 44.2 7.4 80 69-151 5-93 (251)
412 PRK10669 putative cation:proto 96.1 0.072 1.6E-06 47.5 10.5 74 71-152 418-492 (558)
413 PRK08159 enoyl-(acyl carrier p 96.1 0.049 1.1E-06 43.7 8.8 79 69-150 9-97 (272)
414 PRK08251 short chain dehydroge 96.1 0.057 1.2E-06 42.5 9.0 78 70-150 2-90 (248)
415 PLN00203 glutamyl-tRNA reducta 96.1 0.033 7.2E-07 48.8 8.2 72 70-152 266-340 (519)
416 COG0031 CysK Cysteine synthase 96.1 0.26 5.6E-06 39.9 12.5 59 63-122 55-116 (300)
417 PRK05708 2-dehydropantoate 2-r 96.1 0.035 7.6E-07 45.4 7.9 98 71-175 3-106 (305)
418 PRK07067 sorbitol dehydrogenas 96.1 0.059 1.3E-06 42.7 9.0 79 70-151 6-90 (257)
419 PRK07856 short chain dehydroge 96.1 0.045 9.8E-07 43.2 8.3 76 69-151 5-85 (252)
420 PRK06124 gluconate 5-dehydroge 96.1 0.057 1.2E-06 42.7 8.9 80 69-151 10-98 (256)
421 PF08240 ADH_N: Alcohol dehydr 96.0 0.006 1.3E-07 41.7 2.8 37 1-38 46-109 (109)
422 PRK07666 fabG 3-ketoacyl-(acyl 96.0 0.077 1.7E-06 41.5 9.5 79 70-151 7-94 (239)
423 PRK11559 garR tartronate semia 96.0 0.11 2.4E-06 42.3 10.7 43 72-115 4-46 (296)
424 PRK08993 2-deoxy-D-gluconate 3 96.0 0.048 1E-06 43.2 8.4 80 69-151 9-95 (253)
425 PRK10538 malonic semialdehyde 96.0 0.043 9.3E-07 43.3 8.1 77 72-151 2-84 (248)
426 PLN02253 xanthoxin dehydrogena 96.0 0.044 9.6E-07 44.1 8.3 80 69-151 17-104 (280)
427 PF01564 Spermine_synth: Sperm 96.0 0.027 5.9E-07 44.5 6.8 96 69-173 76-191 (246)
428 PF07021 MetW: Methionine bios 96.0 0.083 1.8E-06 39.7 8.8 73 66-148 10-82 (193)
429 COG2084 MmsB 3-hydroxyisobutyr 96.0 0.13 2.7E-06 41.5 10.5 44 72-116 2-46 (286)
430 PRK12823 benD 1,6-dihydroxycyc 96.0 0.031 6.8E-07 44.3 7.3 79 69-150 7-93 (260)
431 KOG1014 17 beta-hydroxysteroid 96.0 0.06 1.3E-06 43.3 8.6 79 68-151 47-136 (312)
432 PF13478 XdhC_C: XdhC Rossmann 96.0 0.082 1.8E-06 37.7 8.5 34 73-107 1-34 (136)
433 PRK14194 bifunctional 5,10-met 96.0 0.12 2.6E-06 41.9 10.4 94 49-175 138-233 (301)
434 PRK08303 short chain dehydroge 96.0 0.053 1.1E-06 44.4 8.6 34 69-103 7-41 (305)
435 PLN02256 arogenate dehydrogena 96.0 0.18 4E-06 41.2 11.7 91 67-174 33-128 (304)
436 PRK07074 short chain dehydroge 96.0 0.056 1.2E-06 42.8 8.6 79 70-151 2-87 (257)
437 PRK07066 3-hydroxybutyryl-CoA 96.0 0.17 3.6E-06 41.7 11.4 39 71-110 8-46 (321)
438 PRK03562 glutathione-regulated 96.0 0.05 1.1E-06 49.1 9.0 93 70-171 400-496 (621)
439 COG0144 Sun tRNA and rRNA cyto 96.0 0.075 1.6E-06 44.5 9.5 104 63-174 150-289 (355)
440 PRK06077 fabG 3-ketoacyl-(acyl 96.0 0.16 3.4E-06 40.0 11.0 104 70-177 6-144 (252)
441 PF01113 DapB_N: Dihydrodipico 95.9 0.11 2.4E-06 36.4 8.9 92 72-177 2-101 (124)
442 PRK06522 2-dehydropantoate 2-r 95.9 0.055 1.2E-06 44.1 8.6 95 72-174 2-101 (304)
443 TIGR02622 CDP_4_6_dhtase CDP-g 95.9 0.051 1.1E-06 45.3 8.5 76 69-151 3-85 (349)
444 PRK08278 short chain dehydroge 95.9 0.045 9.8E-07 43.9 7.9 80 69-151 5-100 (273)
445 PRK08945 putative oxoacyl-(acy 95.9 0.079 1.7E-06 41.7 9.2 84 67-151 9-102 (247)
446 TIGR00417 speE spermidine synt 95.9 0.075 1.6E-06 42.7 9.0 101 69-173 72-186 (270)
447 PRK07792 fabG 3-ketoacyl-(acyl 95.9 0.078 1.7E-06 43.4 9.3 80 69-151 11-99 (306)
448 PRK07340 ornithine cyclodeamin 95.9 0.071 1.5E-06 43.6 8.9 105 68-187 123-231 (304)
449 PRK06849 hypothetical protein; 95.9 0.12 2.6E-06 43.9 10.7 95 69-165 3-100 (389)
450 KOG0725 Reductases with broad 95.9 0.047 1E-06 43.8 7.8 80 69-151 7-99 (270)
451 PRK08226 short chain dehydroge 95.9 0.05 1.1E-06 43.3 8.0 80 69-151 5-92 (263)
452 TIGR00872 gnd_rel 6-phosphoglu 95.9 0.25 5.3E-06 40.4 12.0 43 72-115 2-44 (298)
453 PRK07102 short chain dehydroge 95.9 0.082 1.8E-06 41.5 9.1 76 71-151 2-86 (243)
454 PRK12550 shikimate 5-dehydroge 95.9 0.041 8.8E-07 44.2 7.3 46 66-111 118-163 (272)
455 PLN02928 oxidoreductase family 95.9 0.14 3E-06 42.7 10.6 98 69-176 158-265 (347)
456 PRK07097 gluconate 5-dehydroge 95.9 0.052 1.1E-06 43.3 8.0 80 69-151 9-97 (265)
457 TIGR00452 methyltransferase, p 95.9 0.046 9.9E-07 44.8 7.6 99 61-172 113-224 (314)
458 PRK06484 short chain dehydroge 95.9 0.04 8.8E-07 48.6 7.9 80 69-151 4-89 (520)
459 PF01210 NAD_Gly3P_dh_N: NAD-d 95.9 0.057 1.2E-06 39.5 7.5 85 72-164 1-91 (157)
460 PRK06997 enoyl-(acyl carrier p 95.9 0.064 1.4E-06 42.7 8.4 80 69-151 5-94 (260)
461 TIGR00715 precor6x_red precorr 95.9 0.043 9.3E-07 43.6 7.2 74 72-151 2-75 (256)
462 cd01484 E1-2_like Ubiquitin ac 95.9 0.057 1.2E-06 42.3 7.8 33 72-104 1-33 (234)
463 COG0569 TrkA K+ transport syst 95.8 0.082 1.8E-06 41.2 8.7 74 72-152 2-77 (225)
464 PRK14188 bifunctional 5,10-met 95.8 0.16 3.5E-06 41.2 10.5 94 49-175 137-232 (296)
465 PRK09599 6-phosphogluconate de 95.8 0.22 4.7E-06 40.7 11.5 43 72-115 2-44 (301)
466 PRK07424 bifunctional sterol d 95.8 0.079 1.7E-06 45.1 9.2 74 69-151 177-255 (406)
467 PRK05557 fabG 3-ketoacyl-(acyl 95.8 0.087 1.9E-06 41.2 9.0 80 69-151 4-93 (248)
468 PRK11064 wecC UDP-N-acetyl-D-m 95.8 0.22 4.7E-06 42.7 11.9 74 71-152 4-86 (415)
469 PRK06436 glycerate dehydrogena 95.8 0.11 2.5E-06 42.4 9.6 35 69-104 121-155 (303)
470 PLN00141 Tic62-NAD(P)-related 95.8 0.07 1.5E-06 42.2 8.3 100 69-175 16-133 (251)
471 TIGR03649 ergot_EASG ergot alk 95.8 0.1 2.3E-06 42.1 9.5 96 72-174 1-105 (285)
472 PRK14106 murD UDP-N-acetylmura 95.7 0.073 1.6E-06 46.1 8.9 70 69-151 4-78 (450)
473 PRK11188 rrmJ 23S rRNA methylt 95.7 0.27 5.8E-06 37.9 11.1 98 67-172 49-164 (209)
474 PRK05650 short chain dehydroge 95.7 0.071 1.5E-06 42.6 8.3 77 72-151 2-87 (270)
475 PRK06523 short chain dehydroge 95.7 0.067 1.5E-06 42.4 8.1 76 69-150 8-86 (260)
476 PRK06935 2-deoxy-D-gluconate 3 95.7 0.057 1.2E-06 42.8 7.7 79 69-151 14-101 (258)
477 PRK03612 spermidine synthase; 95.7 0.082 1.8E-06 46.7 9.2 102 68-173 296-415 (521)
478 PRK03659 glutathione-regulated 95.7 0.069 1.5E-06 48.1 8.8 93 71-172 401-497 (601)
479 PRK02472 murD UDP-N-acetylmura 95.7 0.086 1.9E-06 45.6 9.3 71 69-151 4-78 (447)
480 PRK12490 6-phosphogluconate de 95.7 0.16 3.5E-06 41.4 10.3 43 72-115 2-44 (299)
481 COG0334 GdhA Glutamate dehydro 95.7 0.21 4.7E-06 42.0 10.9 61 42-105 180-241 (411)
482 PF10727 Rossmann-like: Rossma 95.7 0.049 1.1E-06 38.3 6.2 79 70-164 10-90 (127)
483 PRK06113 7-alpha-hydroxysteroi 95.7 0.087 1.9E-06 41.7 8.6 80 69-151 10-98 (255)
484 PRK06463 fabG 3-ketoacyl-(acyl 95.7 0.092 2E-06 41.5 8.7 80 69-151 6-89 (255)
485 PRK12936 3-ketoacyl-(acyl-carr 95.7 0.077 1.7E-06 41.6 8.2 80 69-151 5-90 (245)
486 PRK12743 oxidoreductase; Provi 95.7 0.083 1.8E-06 41.9 8.4 79 70-151 2-90 (256)
487 PF13659 Methyltransf_26: Meth 95.7 0.051 1.1E-06 37.3 6.3 96 70-172 1-114 (117)
488 PF00070 Pyr_redox: Pyridine n 95.7 0.053 1.1E-06 34.6 5.9 33 72-105 1-33 (80)
489 PRK15461 NADH-dependent gamma- 95.7 0.2 4.3E-06 40.9 10.6 43 72-115 3-45 (296)
490 PF01118 Semialdhyde_dh: Semia 95.6 0.071 1.5E-06 37.1 6.9 91 72-175 1-99 (121)
491 PRK05562 precorrin-2 dehydroge 95.6 0.11 2.4E-06 40.3 8.3 92 69-173 24-116 (223)
492 KOG1207 Diacetyl reductase/L-x 95.6 0.05 1.1E-06 40.0 6.0 45 69-114 6-51 (245)
493 PRK14903 16S rRNA methyltransf 95.6 0.27 5.9E-06 42.3 11.6 103 63-175 231-368 (431)
494 TIGR01963 PHB_DH 3-hydroxybuty 95.6 0.094 2E-06 41.3 8.3 78 71-151 2-88 (255)
495 TIGR01532 E4PD_g-proteo D-eryt 95.6 0.086 1.9E-06 43.4 8.1 100 72-176 1-123 (325)
496 PLN02490 MPBQ/MSBQ methyltrans 95.6 0.089 1.9E-06 43.6 8.3 98 68-174 112-216 (340)
497 PRK13255 thiopurine S-methyltr 95.6 0.15 3.3E-06 39.5 9.1 102 65-172 33-154 (218)
498 PRK07578 short chain dehydroge 95.6 0.35 7.5E-06 36.7 11.1 63 72-151 2-65 (199)
499 PRK07775 short chain dehydroge 95.6 0.11 2.3E-06 41.8 8.6 80 69-151 9-97 (274)
500 PRK08293 3-hydroxybutyryl-CoA 95.5 0.23 5E-06 40.3 10.6 40 71-111 4-43 (287)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=4.4e-42 Score=273.97 Aligned_cols=236 Identities=27% Similarity=0.401 Sum_probs=207.6
Q ss_pred CCCCcccccCCcee-------eeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEE
Q 025336 2 LDGTSRMSVRGQKL-------YHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVA 74 (254)
Q Consensus 2 g~~~~~~~~~Gd~v-------~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vl 74 (254)
+|+.|.+|..|... .++..+|+|+||+++|+.+++++|+++++++||.+.|++.|+|++| .+..++||++|+
T Consensus 93 ~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~ 171 (339)
T COG1064 93 SCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVA 171 (339)
T ss_pred CCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEE
Confidence 45666666655443 3455569999999999999999999999999999999999999999 569999999999
Q ss_pred EEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhH
Q 025336 75 VLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSL 154 (254)
Q Consensus 75 I~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~ 154 (254)
|.|.|++|++++|+||.+|+ +|++++++++|.+.++++|++++++.++ ++..+.+++ .+|+++||++ +..
T Consensus 172 I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~~---~~~~~~~~~-----~~d~ii~tv~-~~~ 241 (339)
T COG1064 172 VVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSD---SDALEAVKE-----IADAIIDTVG-PAT 241 (339)
T ss_pred EECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcCC---chhhHHhHh-----hCcEEEECCC-hhh
Confidence 99999999999999999998 9999999999999999999999999776 777777765 2999999999 779
Q ss_pred HHHHHHHcccCCcEEEEEccCC-CceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecc
Q 025336 155 LSEALETTKVGKGKVIVIGVGV-DTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLE 233 (254)
Q Consensus 155 ~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (254)
++.+++.|+++ |+++.+|... ....+++...++.+++++.|+..++ ..++++++++..+|+ +++.+.+.++++
T Consensus 242 ~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~---~~d~~e~l~f~~~g~--Ikp~i~e~~~l~ 315 (339)
T COG1064 242 LEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT---RADLEEALDFAAEGK--IKPEILETIPLD 315 (339)
T ss_pred HHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC---HHHHHHHHHHHHhCC--ceeeEEeeECHH
Confidence 99999999999 9999999985 4445677888888999999999775 678999999999999 555554689999
Q ss_pred cHHHHHHHHcCCCe-eEEEEeC
Q 025336 234 EIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 234 ~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
++++||+.|.+++. +|.||++
T Consensus 316 ~in~A~~~m~~g~v~gR~Vi~~ 337 (339)
T COG1064 316 EINEAYERMEKGKVRGRAVIDM 337 (339)
T ss_pred HHHHHHHHHHcCCeeeEEEecC
Confidence 99999999999988 5998874
No 2
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.9e-41 Score=257.28 Aligned_cols=249 Identities=46% Similarity=0.806 Sum_probs=233.2
Q ss_pred CCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 025336 3 DGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVG 82 (254)
Q Consensus 3 ~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G 82 (254)
++.++|..+|+.+|.+.+..+|+||.++++..+.++++..+++.++++.+...|+|.+.++.+.+++|+++.|+|.|++|
T Consensus 126 DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VG 205 (375)
T KOG0022|consen 126 DGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVG 205 (375)
T ss_pred CCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHH
Confidence 45667666688888887778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHc
Q 025336 83 LGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 162 (254)
Q Consensus 83 ~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l 162 (254)
+++++-+|..|+.++|++|.+++|.+.++++|++..+|..+ ......+.|.+++++ |+|+.|||+|+...+.+++.+.
T Consensus 206 Lav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d-~~~~i~evi~EmTdg-GvDysfEc~G~~~~m~~al~s~ 283 (375)
T KOG0022|consen 206 LAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKD-LKKPIQEVIIEMTDG-GVDYSFECIGNVSTMRAALESC 283 (375)
T ss_pred HHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhh-ccccHHHHHHHHhcC-CceEEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999885 224688899999997 9999999999999999999999
Q ss_pred ccCCcEEEEEccCCC-ceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHH
Q 025336 163 KVGKGKVIVIGVGVD-TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 241 (254)
Q Consensus 163 ~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 241 (254)
..+||+.+++|.... +.+++.++.++ ++.++.|+.++.+..+.+++.+++.+.++++++++.++|.+||+++++||+.
T Consensus 284 h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~l 362 (375)
T KOG0022|consen 284 HKGWGKSVVIGVAAAGQEISTRPFQLV-TGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDL 362 (375)
T ss_pred hcCCCeEEEEEecCCCcccccchhhhc-cccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHH
Confidence 999999999999877 88889999988 8999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCeeEEEEeC
Q 025336 242 LKQPDCVKVLITI 254 (254)
Q Consensus 242 ~~~~~~~k~vi~~ 254 (254)
|.+|+.+|.|+.+
T Consensus 363 l~~GksiR~vl~~ 375 (375)
T KOG0022|consen 363 LHEGKSIRCVLWM 375 (375)
T ss_pred HhCCceEEEEEeC
Confidence 9999999999864
No 3
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=6.9e-41 Score=272.88 Aligned_cols=245 Identities=25% Similarity=0.367 Sum_probs=211.4
Q ss_pred CCCCCcccccCCceeeeee---ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEc
Q 025336 1 MLDGTSRMSVRGQKLYHIF---SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLG 77 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~---~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G 77 (254)
+|+++.+|++ ||+|+... ..|+|+||+.+|++.++++|+++|+++|++++++++|||+++....++++|++|||+|
T Consensus 72 vG~~V~~~~~-GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~g 150 (326)
T COG0604 72 VGSGVTGFKV-GDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHG 150 (326)
T ss_pred eCCCCCCcCC-CCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 4789999988 99999874 5699999999999999999999999999999999999999999889999999999998
Q ss_pred C-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHH
Q 025336 78 L-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS 156 (254)
Q Consensus 78 ~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~ 156 (254)
+ |++|++++|+||.+|+ .++++..++++.++++++|++++++|++ .++.+.++++++++++|+|+|++|+. .+.
T Consensus 151 aaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~ 225 (326)
T COG0604 151 AAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE---EDFVEQVRELTGGKGVDVVLDTVGGD-TFA 225 (326)
T ss_pred CCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc---ccHHHHHHHHcCCCCceEEEECCCHH-HHH
Confidence 5 9999999999999998 6777778888888999999999999998 88999999999998999999999998 789
Q ss_pred HHHHHcccCCcEEEEEccCC-CceeeccHHHHHhCCCEEEeeecCCC---CCCCCHHHHHHHHhCCCCCCCCceEEEeec
Q 025336 157 EALETTKVGKGKVIVIGVGV-DTMVPLNVIALACGGRTLKGTTFGGI---KTKSDLPILLDKCKNKEFKLHQLLTHHVKL 232 (254)
Q Consensus 157 ~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (254)
.++++++++ |+++.+|... ....+++...+..+.+.+.|...... ...+.+.++.+++++|+ +++.+..+|||
T Consensus 226 ~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~--l~~~i~~~~~l 302 (326)
T COG0604 226 ASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGK--LKPVIDRVYPL 302 (326)
T ss_pred HHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCC--CcceeccEech
Confidence 999999999 9999999987 35566666777778888888876533 11345777999999999 66667789999
Q ss_pred ccHHHHHHHHcCC-Ce-eEEEEeC
Q 025336 233 EEIDKAIQLLKQP-DC-VKVLITI 254 (254)
Q Consensus 233 ~~~~~a~~~~~~~-~~-~k~vi~~ 254 (254)
++..++..+.... +. +|+||++
T Consensus 303 ~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 303 AEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred hhhHHHHHHHHcccCCcceEEEeC
Confidence 9965555543333 44 7999875
No 4
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=4.8e-40 Score=257.29 Aligned_cols=237 Identities=40% Similarity=0.745 Sum_probs=221.3
Q ss_pred CceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHH
Q 025336 12 GQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARM 91 (254)
Q Consensus 12 Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~ 91 (254)
|..++.+.+.++|+||.++++..++|++++.+++.++.+.|...|.+.+..+.+++++|++|.|.|.|++|++++|-|+.
T Consensus 128 ~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~ 207 (366)
T COG1062 128 GVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKA 207 (366)
T ss_pred CcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHH
Confidence 44455555667999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred cCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCc-hHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEE
Q 025336 92 QGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNK-SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVI 170 (254)
Q Consensus 92 ~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 170 (254)
.|+.++++++.+++|+++++++|+++++|.++ . +..+.+.+++++ ++|++|||+|+...+++++.++.+. |+.+
T Consensus 208 agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~---~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~-G~~v 282 (366)
T COG1062 208 AGAGRIIAVDINPEKLELAKKFGATHFVNPKE---VDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRG-GTSV 282 (366)
T ss_pred cCCceEEEEeCCHHHHHHHHhcCCceeecchh---hhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcC-CeEE
Confidence 99999999999999999999999999999987 5 699999999998 9999999999998999999999996 9999
Q ss_pred EEccCCC-ceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeE
Q 025336 171 VIGVGVD-TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVK 249 (254)
Q Consensus 171 ~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k 249 (254)
..|.... +.+++++.++. .+.+++|+++++-....+++++++++.+|++++++++++.++|+|+++||+.|.+|+.+|
T Consensus 283 ~iGv~~~~~~i~~~~~~lv-~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR 361 (366)
T COG1062 283 IIGVAGAGQEISTRPFQLV-TGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIR 361 (366)
T ss_pred EEecCCCCceeecChHHee-ccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceee
Confidence 9999877 77778888888 559999999998888899999999999999999999999999999999999999999999
Q ss_pred EEEeC
Q 025336 250 VLITI 254 (254)
Q Consensus 250 ~vi~~ 254 (254)
-||.+
T Consensus 362 ~Vi~~ 366 (366)
T COG1062 362 SVIRF 366 (366)
T ss_pred EEecC
Confidence 98865
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-39 Score=253.14 Aligned_cols=246 Identities=25% Similarity=0.417 Sum_probs=214.2
Q ss_pred CCCCCcccccCCceeee------------------------ee----ccCcceeeEEecCCceEEcCCCCCccccccccc
Q 025336 1 MLDGTSRMSVRGQKLYH------------------------IF----SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSC 52 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~------------------------~~----~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~ 52 (254)
+|+.|+.+++ ||||.- +. -+|++++|+++++++++|+|+++|++++|++ .
T Consensus 76 vG~~Vk~LkV-GDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~-e 153 (354)
T KOG0024|consen 76 VGDEVKHLKV-GDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALI-E 153 (354)
T ss_pred hccccccccc-CCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccc-c
Confidence 4788899999 999851 10 1289999999999999999999999999988 6
Q ss_pred hhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCC-CCchHHH
Q 025336 53 GFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDE-PNKSISE 131 (254)
Q Consensus 53 ~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~ 131 (254)
++++++++. +++.+++|++|||+|+|++|+++...||.+|+.+|++++..+.|++.++++|++.+.+.... +++++.+
T Consensus 154 PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~ 232 (354)
T KOG0024|consen 154 PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAE 232 (354)
T ss_pred chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHH
Confidence 799999998 79999999999999999999999999999999999999999999999999999987766542 1345555
Q ss_pred HHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHH
Q 025336 132 LVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPIL 211 (254)
Q Consensus 132 ~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 211 (254)
.+....+...+|+.|||+|....++.++..++.+ |++++.|.... ..+++......+++.+.|+. .....+|+.+
T Consensus 233 ~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~-~~~fpi~~v~~kE~~~~g~f---ry~~~~y~~a 307 (354)
T KOG0024|consen 233 LVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAE-EIQFPIIDVALKEVDLRGSF---RYCNGDYPTA 307 (354)
T ss_pred HHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCC-ccccChhhhhhheeeeeeee---eeccccHHHH
Confidence 6666555557999999999988999999999999 99999998776 67788888888999999986 2234589999
Q ss_pred HHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe--eEEEEeC
Q 025336 212 LDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC--VKVLITI 254 (254)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~k~vi~~ 254 (254)
++++.+|++++++++++.|++++..+||+.+.+++. +|++|..
T Consensus 308 i~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~ 352 (354)
T KOG0024|consen 308 IELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITG 352 (354)
T ss_pred HHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeC
Confidence 999999999999999999999999999999988774 6999863
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.8e-38 Score=265.54 Aligned_cols=226 Identities=34% Similarity=0.552 Sum_probs=202.8
Q ss_pred CcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc
Q 025336 22 STWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGID 101 (254)
Q Consensus 22 g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~ 101 (254)
|+|+||+++|+..++++|+++++++++.++++++|||+++....++++|++|||+|+|++|++++|+||..|+.+|++++
T Consensus 144 G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~ 223 (371)
T cd08281 144 SAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVD 223 (371)
T ss_pred ccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEc
Confidence 68999999999999999999999999999999999999987888999999999999999999999999999996699999
Q ss_pred CCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-cee
Q 025336 102 KNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-TMV 180 (254)
Q Consensus 102 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~ 180 (254)
.++++.++++++|+++++++.+ +++.+.+++.+++ ++|++|||+|.+..+..++++++++ |+++.+|...+ ...
T Consensus 224 ~~~~r~~~a~~~Ga~~~i~~~~---~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~ 298 (371)
T cd08281 224 LNEDKLALARELGATATVNAGD---PNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARL 298 (371)
T ss_pred CCHHHHHHHHHcCCceEeCCCc---hhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCcee
Confidence 9999999999999999999887 7888888888877 8999999999877889999999999 99999998654 346
Q ss_pred eccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEE
Q 025336 181 PLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 252 (254)
Q Consensus 181 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 252 (254)
+++...++.+++++.|+..+.+...++++++++++++|+++++++++++|+|+++++||+.+.+++..|.||
T Consensus 299 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 299 SVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred eecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 677777888999999998765544567899999999999988888999999999999999999888864444
No 7
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=4.6e-38 Score=261.93 Aligned_cols=230 Identities=28% Similarity=0.532 Sum_probs=204.4
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
.|+|+||+.+|+..++++|+++++++++.+++++.|+|+++....++++|++|||+|+|++|++++|+||.+|+.+|+++
T Consensus 128 ~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~ 207 (358)
T TIGR03451 128 IGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAV 207 (358)
T ss_pred cccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 48999999999999999999999999999999999999988778889999999999999999999999999999569999
Q ss_pred cCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-ce
Q 025336 101 DKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-TM 179 (254)
Q Consensus 101 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~ 179 (254)
++++++.++++++|++.++++.+ +++.+.+.+.+++.++|++|||+|++..+..++++++++ |+++.+|.... ..
T Consensus 208 ~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~ 283 (358)
T TIGR03451 208 DIDDRKLEWAREFGATHTVNSSG---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMT 283 (358)
T ss_pred cCCHHHHHHHHHcCCceEEcCCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCce
Confidence 99999999999999999999887 788888888888778999999999876889999999999 99999998654 34
Q ss_pred eeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 180 VPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 180 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
.++++..++.+++++.+++.+.....++++++++++++|++++.++++++||++++++||+.+.+++..|++|.+
T Consensus 284 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~~ 358 (358)
T TIGR03451 284 LELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVEL 358 (358)
T ss_pred eeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEeC
Confidence 567777777799999998654333456789999999999988888899999999999999999888878888864
No 8
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=3.4e-37 Score=258.48 Aligned_cols=230 Identities=45% Similarity=0.810 Sum_probs=199.8
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
.|+|+||+++|+..++++|+++++++++.+++++.|||+++....++++|++|||+|+|++|++++|+||.+|+.+|+++
T Consensus 150 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~ 229 (381)
T PLN02740 150 TSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGV 229 (381)
T ss_pred CccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEE
Confidence 48999999999999999999999999999999999999988778899999999999999999999999999998669999
Q ss_pred cCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHccc-CCcEEEEEccCCC-c
Q 025336 101 DKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV-GKGKVIVIGVGVD-T 178 (254)
Q Consensus 101 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~~g~~~~-~ 178 (254)
++++++.+.++++|++.++++.+ ...++.+.+++++++ ++|++||++|++..+..++.++++ + |+++.+|.... .
T Consensus 230 ~~~~~r~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~-G~~v~~G~~~~~~ 306 (381)
T PLN02740 230 DINPEKFEKGKEMGITDFINPKD-SDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGW-GLTVLLGIHPTPK 306 (381)
T ss_pred cCChHHHHHHHHcCCcEEEeccc-ccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCC-CEEEEEccCCCCc
Confidence 99999999999999999998764 112477788888877 899999999987788999999987 5 99999998754 2
Q ss_pred eeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 179 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 179 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
.++++...++ +++++.|+..+.+....+++++++++.+++++++++++++|+|+|+++||+.+.+++..|++|++
T Consensus 307 ~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 307 MLPLHPMELF-DGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred eecccHHHHh-cCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 3455554454 78999998876554445789999999999988888899999999999999999888878999874
No 9
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.4e-38 Score=237.25 Aligned_cols=242 Identities=23% Similarity=0.279 Sum_probs=209.7
Q ss_pred CCCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEc-CC
Q 025336 1 MLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLG-LG 79 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G-~g 79 (254)
.|.+++++++ ||+|.-....|.|+|+..+|...++++|+.+++.+++++...++|||..+.+...+++|++||++. +|
T Consensus 79 vG~gvtdrkv-GDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAG 157 (336)
T KOG1197|consen 79 VGEGVTDRKV-GDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAG 157 (336)
T ss_pred ecCCcccccc-ccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccc
Confidence 4889999999 999987777799999999999999999999999999999999999999999999999999999996 59
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHH
Q 025336 80 TVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 159 (254)
Q Consensus 80 ~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~ 159 (254)
++|++++|++|..|. ++|++..+.+|++.+++.|+.+.|+++. +|+.+++.++++++|+|+++|.+|.. ++...+
T Consensus 158 GVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~d-t~~~sl 232 (336)
T KOG1197|consen 158 GVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKD-TFAKSL 232 (336)
T ss_pred cHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc---hhHHHHHHhccCCCCceeeeccccch-hhHHHH
Confidence 999999999999999 9999999999999999999999999999 99999999999999999999999997 899999
Q ss_pred HHcccCCcEEEEEccCCC--ceeeccHHHHHhCCCEEEeeecCCCCC-C----CCHHHHHHHHhCCCCCCCCceEEEeec
Q 025336 160 ETTKVGKGKVIVIGVGVD--TMVPLNVIALACGGRTLKGTTFGGIKT-K----SDLPILLDKCKNKEFKLHQLLTHHVKL 232 (254)
Q Consensus 160 ~~l~~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~i~g~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (254)
.+|++. |++|.+|..++ ++++++ .+.-+.+.+.......+.. . ....+++.++.+|. ++..+.|+|||
T Consensus 233 ~~Lk~~-G~mVSfG~asgl~~p~~l~--~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~--lk~~I~~~ypl 307 (336)
T KOG1197|consen 233 AALKPM-GKMVSFGNASGLIDPIPLN--QLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGH--LKIHIDHVYPL 307 (336)
T ss_pred HHhccC-ceEEEeccccCCCCCeehh--hcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCc--cceeeeeecch
Confidence 999999 99999999888 445433 3333455444333222222 1 12446778888998 55568999999
Q ss_pred ccHHHHHHHHcCCCe-eEEEEe
Q 025336 233 EEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 233 ~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
+++.+|+..++++.. +|+++.
T Consensus 308 s~vadA~~diesrktvGkvlLl 329 (336)
T KOG1197|consen 308 SKVADAHADIESRKTVGKVLLL 329 (336)
T ss_pred HHHHHHHHHHHhhhccceEEEe
Confidence 999999999998887 598875
No 10
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=6.7e-37 Score=255.56 Aligned_cols=229 Identities=39% Similarity=0.701 Sum_probs=195.6
Q ss_pred CcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc
Q 025336 22 STWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGID 101 (254)
Q Consensus 22 g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~ 101 (254)
|+|+||+++|+..++++|+++++++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+||.+|+.+|++++
T Consensus 138 G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~ 217 (368)
T TIGR02818 138 STFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAID 217 (368)
T ss_pred ccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 68999999999999999999999999999999999999987888999999999999999999999999999986799999
Q ss_pred CCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHccc-CCcEEEEEccCCC-ce
Q 025336 102 KNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV-GKGKVIVIGVGVD-TM 179 (254)
Q Consensus 102 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~~g~~~~-~~ 179 (254)
.++++.+.++++|++.++++++ ...++.+.+++++++ ++|++|||+|++..+..+++++++ + |+++.+|.... ..
T Consensus 218 ~~~~~~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~ 294 (368)
T TIGR02818 218 INPAKFELAKKLGATDCVNPND-YDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGW-GESIIIGVAGAGQE 294 (368)
T ss_pred CCHHHHHHHHHhCCCeEEcccc-cchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCC-CeEEEEeccCCCCc
Confidence 9999999999999999998763 114566778888776 899999999987788999999977 5 99999998643 33
Q ss_pred eeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 180 VPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 180 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
.++....+. ++..+.|+..+......++.++++++++++++++++++++|||+++++||+.+.+++.+|++|.+
T Consensus 295 ~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 295 ISTRPFQLV-TGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred ccccHHHHh-ccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 444455554 45567777654433345789999999999988888999999999999999999888778999875
No 11
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=8.9e-37 Score=252.61 Aligned_cols=241 Identities=26% Similarity=0.436 Sum_probs=208.5
Q ss_pred CCCCcccccCCceeeeee----------------------------ccCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 2 LDGTSRMSVRGQKLYHIF----------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~----------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
|+++..+++ ||+|+... ..|+|+||+.+|+..++++|++++++++++++++
T Consensus 70 G~~v~~~~~-Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~ 148 (339)
T cd08239 70 GPGVTHFRV-GDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCG 148 (339)
T ss_pred CCCCccCCC-CCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcch
Confidence 677788899 99997432 2489999999999999999999999999999999
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
+.|||+++ ...++++|++|||+|+|++|++++|++|.+|+++|+++++++++.++++++|++.++++++ .+ .+.+
T Consensus 149 ~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~---~~-~~~~ 223 (339)
T cd08239 149 IGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ---DD-VQEI 223 (339)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc---ch-HHHH
Confidence 99999998 5778899999999999999999999999999944999999999999999999999999886 55 6777
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeecc-HHHHHhCCCEEEeeecCCCCCCCCHHHHH
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLN-VIALACGGRTLKGTTFGGIKTKSDLPILL 212 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 212 (254)
.+.+++.++|++|||+|++..+..++++++++ |+++.+|..... +++ ...++.+++++.|++... .+++++++
T Consensus 224 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~ 297 (339)
T cd08239 224 RELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFS---VPDMEECA 297 (339)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCC---HHHHHHHH
Confidence 77777778999999999986778899999999 999999976542 222 234666999999987542 46799999
Q ss_pred HHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 213 DKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
+++.++++++.++++++|+++++++||+.+.++..+|+||++
T Consensus 298 ~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 298 EFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 999999988888999999999999999999887767999874
No 12
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=2.3e-36 Score=252.57 Aligned_cols=229 Identities=40% Similarity=0.729 Sum_probs=196.8
Q ss_pred CcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc
Q 025336 22 STWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGID 101 (254)
Q Consensus 22 g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~ 101 (254)
|+|+||+.+|+..++++|+++++++++.+++++.|||+++....++++|++|||+|+|++|++++|+||.+|+.+|++++
T Consensus 139 G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~ 218 (368)
T cd08300 139 STFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGID 218 (368)
T ss_pred ccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Confidence 68999999999999999999999999999999999999987788999999999999999999999999999996699999
Q ss_pred CCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-cee
Q 025336 102 KNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-TMV 180 (254)
Q Consensus 102 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~ 180 (254)
+++++.+.++++|+++++++++ ..+++.+.+.+++++ ++|++|||+|++..+..+++++++++|+++.+|.... ...
T Consensus 219 ~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~ 296 (368)
T cd08300 219 INPDKFELAKKFGATDCVNPKD-HDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEI 296 (368)
T ss_pred CCHHHHHHHHHcCCCEEEcccc-cchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCcc
Confidence 9999999999999999998875 112577888888877 8999999999876889999999773389999997643 234
Q ss_pred eccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEe
Q 025336 181 PLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 253 (254)
Q Consensus 181 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 253 (254)
.++...+. ++..+.++..+.+....++++++++++++++++.++++++|+|+++++||+.+.+++..|++|+
T Consensus 297 ~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 297 STRPFQLV-TGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred ccCHHHHh-hcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 44454454 4567778776666556779999999999998888889999999999999999988887899874
No 13
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=3e-36 Score=252.21 Aligned_cols=230 Identities=45% Similarity=0.816 Sum_probs=196.8
Q ss_pred CcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc
Q 025336 22 STWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGID 101 (254)
Q Consensus 22 g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~ 101 (254)
|+|+||+.+|+..++++|+++++++++.+++++.++|+++....++++|++|||+|+|++|++++|++|.+|+..|++++
T Consensus 146 G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~ 225 (378)
T PLN02827 146 SSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVD 225 (378)
T ss_pred ccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEC
Confidence 79999999999999999999999999998888899998877778899999999999999999999999999985688888
Q ss_pred CCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceee
Q 025336 102 KNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVP 181 (254)
Q Consensus 102 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 181 (254)
.++++.++++++|+++++++++ ..+++.+.+++++++ ++|++||++|.+..+..+++.+++++|+++.+|.... ...
T Consensus 226 ~~~~~~~~a~~lGa~~~i~~~~-~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~-~~~ 302 (378)
T PLN02827 226 INPEKAEKAKTFGVTDFINPND-LSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA-KPE 302 (378)
T ss_pred CCHHHHHHHHHcCCcEEEcccc-cchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-Ccc
Confidence 8999999999999999998764 113677778888776 8999999999876789999999884389999998654 223
Q ss_pred ccH-HHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 182 LNV-IALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 182 ~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
+.. ..++.+++++.|+....+....+++++++++++++++++++++++|+|+++++||+.+.+++.+|.||++
T Consensus 303 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~ 376 (378)
T PLN02827 303 VSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHM 376 (378)
T ss_pred ccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEe
Confidence 322 2455699999998876554456789999999999988877899999999999999999988878999864
No 14
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=8.6e-36 Score=249.30 Aligned_cols=228 Identities=44% Similarity=0.815 Sum_probs=198.4
Q ss_pred CcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc
Q 025336 22 STWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGID 101 (254)
Q Consensus 22 g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~ 101 (254)
|+|+||+++|+..++++|+++++++++++++++.|||.++....++++|++|||+|+|++|++++|+||.+|+.+|++++
T Consensus 140 G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~ 219 (369)
T cd08301 140 STFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVD 219 (369)
T ss_pred ccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 78999999999999999999999999999999999999887788999999999999999999999999999986799999
Q ss_pred CCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHccc-CCcEEEEEccCCC-ce
Q 025336 102 KNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV-GKGKVIVIGVGVD-TM 179 (254)
Q Consensus 102 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~~g~~~~-~~ 179 (254)
+++++.++++++|++.++++.+ ...++.+.+++++++ ++|++|||+|.+..+..+++++++ + |+++.+|.... ..
T Consensus 220 ~~~~~~~~~~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~~~~~~~ 296 (369)
T cd08301 220 LNPSKFEQAKKFGVTEFVNPKD-HDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGVPHKDAV 296 (369)
T ss_pred CCHHHHHHHHHcCCceEEcccc-cchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECcCCCCcc
Confidence 9999999999999998888764 113466777777776 899999999987678899999998 6 89999998764 34
Q ss_pred eeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEe
Q 025336 180 VPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 253 (254)
Q Consensus 180 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 253 (254)
+++++..++ +++++.|+..+.+....+++++++++.++.+++++.++++|||+++++||+.+.+++..|++|.
T Consensus 297 ~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 369 (369)
T cd08301 297 FSTHPMNLL-NGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCILH 369 (369)
T ss_pred cccCHHHHh-cCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEeC
Confidence 556655555 7899999887665555678999999999998888888999999999999999999888898873
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=9.8e-36 Score=246.57 Aligned_cols=220 Identities=21% Similarity=0.317 Sum_probs=187.7
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
+|+|+||+++|+..++++|+++++++++ +..++.+||+++ ......++++|||+|+|++|++++|+++.+|+++|+++
T Consensus 123 ~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~ 200 (343)
T PRK09880 123 DGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCA 200 (343)
T ss_pred CCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE
Confidence 4999999999999999999999987665 447788999998 45566689999999999999999999999999679999
Q ss_pred cCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCcee
Q 025336 101 DKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMV 180 (254)
Q Consensus 101 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 180 (254)
++++++++.++++|+++++++++ +++.+.. +. .+ ++|++|||+|.+..+..++++++++ |+++.+|.... ..
T Consensus 201 ~~~~~~~~~a~~lGa~~vi~~~~---~~~~~~~-~~-~g-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~ 272 (343)
T PRK09880 201 DVSPRSLSLAREMGADKLVNPQN---DDLDHYK-AE-KG-YFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA-PP 272 (343)
T ss_pred eCCHHHHHHHHHcCCcEEecCCc---ccHHHHh-cc-CC-CCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CC
Confidence 99999999999999999999876 5544322 21 23 6999999999876889999999999 99999997554 35
Q ss_pred eccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 181 PLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 181 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
++++..++.+++++.|+... .+++++++++++++++++.++++++|+++++++||+.+.++.. +|++|.+
T Consensus 273 ~~~~~~~~~k~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 273 EFPMMTLIVKEISLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ccCHHHHHhCCcEEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 66677777899999998632 4679999999999998888889999999999999999987765 6999874
No 16
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1.7e-35 Score=247.03 Aligned_cols=229 Identities=50% Similarity=0.878 Sum_probs=197.6
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
.|+|+||+++++..++++|+++++++++.+++++.|||+++....++++|++|||+|+|++|++++|+|+.+|+.+|+++
T Consensus 136 ~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~ 215 (365)
T cd08277 136 TSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGV 215 (365)
T ss_pred cccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 47899999999999999999999999999999999999998778899999999999999999999999999998679999
Q ss_pred cCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHccc-CCcEEEEEccCCCce
Q 025336 101 DKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV-GKGKVIVIGVGVDTM 179 (254)
Q Consensus 101 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~~g~~~~~~ 179 (254)
++++++.+.++++|+++++++.+ ...++.+.+++.++ .++|++|||+|+...+..+++++++ + |+++.+|...+..
T Consensus 216 ~~~~~~~~~~~~~ga~~~i~~~~-~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~ 292 (365)
T cd08277 216 DINEDKFEKAKEFGATDFINPKD-SDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGW-GVSVVVGVPPGAE 292 (365)
T ss_pred eCCHHHHHHHHHcCCCcEecccc-ccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCC-CEEEEEcCCCccc
Confidence 99999999999999999988764 11235667777777 4899999999987688999999976 6 9999999865323
Q ss_pred eeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEe
Q 025336 180 VPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 253 (254)
Q Consensus 180 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 253 (254)
.++++..+. ++.++.|+..+.+....++++++++++++.+++++++++.|+|+++++||+.+.+++.+|++++
T Consensus 293 ~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 293 LSIRPFQLI-LGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred cccCHhHHh-hCCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 455666666 4899999887765545678999999999998888899999999999999999988877799874
No 17
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=5.3e-35 Score=242.69 Aligned_cols=245 Identities=20% Similarity=0.284 Sum_probs=203.8
Q ss_pred CCCCCcccccCCceeeeee---------------------------ccCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 1 MLDGTSRMSVRGQKLYHIF---------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~---------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
+|+++..|++ ||+|+.+. ..|+|+||+.+|+..++++|+++++++++.+. +
T Consensus 68 vG~~v~~~~v-Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~ 145 (347)
T PRK10309 68 VGSGVDDLHP-GDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-P 145 (347)
T ss_pred eCCCCCCCCC-CCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-H
Confidence 3677888999 99997542 24899999999999999999999999998773 5
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
+.++++++ ....++++++|||+|+|++|++++|+|+.+|++.|+++++++++.+.++++|+++++++++ .+ .+.+
T Consensus 146 ~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~-~~~~ 220 (347)
T PRK10309 146 ITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE---MS-APQI 220 (347)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc---cC-HHHH
Confidence 56678775 6778899999999999999999999999999955788989999999999999999998875 44 4566
Q ss_pred HHhhCCCCcc-EEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeecc---HHHHHhCCCEEEeeecCCCC--CCCC
Q 025336 134 KGITHGMGVD-YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLN---VIALACGGRTLKGTTFGGIK--TKSD 207 (254)
Q Consensus 134 ~~~~~~~~~d-~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~--~~~~ 207 (254)
.+.+.+.++| ++|||+|++..+..++++++++ |+++.+|...+ ..+++ +..++.+++++.|+..+... ..++
T Consensus 221 ~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 298 (347)
T PRK10309 221 QSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHH-DLHLTSATFGKILRKELTVIGSWMNYSSPWPGQE 298 (347)
T ss_pred HHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CcccChhhhhHHhhcCcEEEEEeccccCCcchhH
Confidence 7777666898 9999999877889999999999 99999997654 22232 23566789999998754221 1367
Q ss_pred HHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 208 LPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
++++++++++|.++++++++++|+|+++++||+.+.++.. +|+|+++
T Consensus 299 ~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 299 WETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred HHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 8899999999998888999999999999999999988776 6999874
No 18
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.5e-35 Score=242.66 Aligned_cols=241 Identities=20% Similarity=0.243 Sum_probs=199.4
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCc--eEE--cCCCCCcc-ccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANY--VVR--VDPSIDLS-HASFLSCGFTTGFGAAWKEAEVEKGSSVAVL 76 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~--v~~--~p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~ 76 (254)
|+++.+|++ ||+|+++ |+|+||+++++.. +.+ +|++++++ ++++++++++|||+++....++++|++|||+
T Consensus 90 g~~v~~~~~-Gd~V~~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~ 165 (348)
T PLN03154 90 DSDDPNFKP-GDLISGI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVS 165 (348)
T ss_pred ecCCCCCCC-CCEEEec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 667788999 9999864 6799999999753 544 48999986 6888999999999999778899999999999
Q ss_pred cC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhH
Q 025336 77 GL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSL 154 (254)
Q Consensus 77 G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~ 154 (254)
|+ |++|++++|+||.+|+ +|++++.++++.++++ ++|++.++++++ ..++.+.+++.+++ ++|++|||+|+. .
T Consensus 166 GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~-gvD~v~d~vG~~-~ 240 (348)
T PLN03154 166 AASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPE-GIDIYFDNVGGD-M 240 (348)
T ss_pred cCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCC-CcEEEEECCCHH-H
Confidence 87 9999999999999999 8999989999999987 799999999874 13677788877764 899999999986 7
Q ss_pred HHHHHHHcccCCcEEEEEccCCCcee-----eccHHHHHhCCCEEEeeecCCCC--CCCCHHHHHHHHhCCCCCCCCceE
Q 025336 155 LSEALETTKVGKGKVIVIGVGVDTMV-----PLNVIALACGGRTLKGTTFGGIK--TKSDLPILLDKCKNKEFKLHQLLT 227 (254)
Q Consensus 155 ~~~~~~~l~~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 227 (254)
+..++++++++ |+++.+|...+... ..+...++.+++++.|+....+. ..+.++++++++++|+++ +.+.
T Consensus 241 ~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~--~~~~ 317 (348)
T PLN03154 241 LDAALLNMKIH-GRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIV--YIED 317 (348)
T ss_pred HHHHHHHhccC-CEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCcc--Ccee
Confidence 89999999999 99999997654211 12455677799999998754321 124577899999999965 4566
Q ss_pred EEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 228 HHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
.+|+|+++++|++.+.+++. +|+||++
T Consensus 318 ~~~~L~~~~~A~~~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 318 MSEGLESAPAALVGLFSGKNVGKQVIRV 345 (348)
T ss_pred cccCHHHHHHHHHHHHcCCCCceEEEEe
Confidence 78999999999999998887 5999874
No 19
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-34 Score=223.90 Aligned_cols=217 Identities=24% Similarity=0.416 Sum_probs=191.3
Q ss_pred CcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc
Q 025336 22 STWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGID 101 (254)
Q Consensus 22 g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~ 101 (254)
|+|++|+++++.+++++|++++.+.||.+.|+..|+|..| .+.++.||+++.|.|+|++|.+++|+||++|. +|++++
T Consensus 135 ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis 212 (360)
T KOG0023|consen 135 GGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVIS 212 (360)
T ss_pred CccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEe
Confidence 5699999999999999999999999999999999999998 68888999999999997799999999999999 999999
Q ss_pred CCc-ccHHHHHhcCCceEeCCC-CCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCce
Q 025336 102 KNP-WKKEKGEAFGMTDFINPD-DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTM 179 (254)
Q Consensus 102 ~~~-~~~~~~~~~g~~~v~~~~-~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 179 (254)
++. +|.+.++.+||+..++.. + ++..+.+.+.+++ ++|.+.+. ....++.++.+++++ |++|.+|.+.. .
T Consensus 213 ~~~~kkeea~~~LGAd~fv~~~~d---~d~~~~~~~~~dg-~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~-~ 284 (360)
T KOG0023|consen 213 TSSKKKEEAIKSLGADVFVDSTED---PDIMKAIMKTTDG-GIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK-P 284 (360)
T ss_pred CCchhHHHHHHhcCcceeEEecCC---HHHHHHHHHhhcC-cceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC-c
Confidence 988 555666789999988877 5 8899999887776 67777666 334689999999999 99999999887 7
Q ss_pred eeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 180 VPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 180 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+.++.+.+..+.+.|.|+.+++ ..+.++++++..++.+. ..+ +..+++++++||+.|.+++. .|.||++
T Consensus 285 ~~~~~~~lil~~~~I~GS~vG~---~ket~E~Ldf~a~~~ik--~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 285 LKLDTFPLILGRKSIKGSIVGS---RKETQEALDFVARGLIK--SPI-ELVKLSEVNEAYERMEKGDVRYRFVVDV 354 (360)
T ss_pred ccccchhhhcccEEEEeecccc---HHHHHHHHHHHHcCCCc--Cce-EEEehhHHHHHHHHHHhcCeeEEEEEEc
Confidence 8888888888999999999886 57799999999999954 444 58899999999999999998 5998874
No 20
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.8e-33 Score=233.95 Aligned_cols=241 Identities=24% Similarity=0.413 Sum_probs=209.4
Q ss_pred CCCCcccccCCceeeee---------------------------e-ccCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 2 LDGTSRMSVRGQKLYHI---------------------------F-SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~---------------------------~-~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
|+++.+|++ ||+|+.. . ..|+|++|+.++...++++|+++++++++.+ .+
T Consensus 80 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~ 157 (351)
T cd08233 80 GSGVTGFKV-GDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EP 157 (351)
T ss_pred CCCCCCCCC-CCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-cH
Confidence 667778999 9999752 1 1589999999999999999999999998876 67
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
+.|||+++ ...+++++++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++++ .++.+.+
T Consensus 158 ~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~---~~~~~~l 233 (351)
T cd08233 158 LAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE---VDVVAEV 233 (351)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCc---cCHHHHH
Confidence 88999998 7888999999999999999999999999999977889989999999999999999999887 7888888
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHH
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLD 213 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 213 (254)
++.++++++|+++||+|.+..+..++++++++ |+++.+|.... ..++++..+..+++++.|.... ..++++++++
T Consensus 234 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~ 308 (351)
T cd08233 234 RKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEK-PISFNPNDLVLKEKTLTGSICY---TREDFEEVID 308 (351)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCC-CCccCHHHHHhhCcEEEEEecc---CcchHHHHHH
Confidence 88887768999999999766889999999999 99999998653 4566777777799999998643 2477999999
Q ss_pred HHhCCCCCCCCceEEEeecccH-HHHHHHHcCCCe--eEEEEe
Q 025336 214 KCKNKEFKLHQLLTHHVKLEEI-DKAIQLLKQPDC--VKVLIT 253 (254)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~--~k~vi~ 253 (254)
+++++++++++.++++|+++++ ++|++.+.+++. +|+||.
T Consensus 309 ~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 309 LLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred HHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 9999998877888889999996 789998887774 699873
No 21
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.5e-33 Score=234.11 Aligned_cols=226 Identities=25% Similarity=0.363 Sum_probs=194.2
Q ss_pred cCcceeeEEecCCceEEcCC------CCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC
Q 025336 21 CSTWSEYMVIDANYVVRVDP------SIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGA 94 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~------~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~ 94 (254)
+|+|+||+.+|+..++++|+ ++++++++.+++++.|+|+++ ....++++++|+|+|+|++|++++|+|+.+|+
T Consensus 113 ~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~ 191 (349)
T TIGR03201 113 QGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA 191 (349)
T ss_pred CCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 48999999999999999999 899999999999999999998 46889999999999999999999999999999
Q ss_pred CeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCcc----EEEEcCCChhHHHHHHHHcccCCcEEE
Q 025336 95 AKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVD----YCFECTGVPSLLSEALETTKVGKGKVI 170 (254)
Q Consensus 95 ~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d----~v~d~~g~~~~~~~~~~~l~~~~G~~v 170 (254)
+|+++++++++.++++++|+++++++.+.+.+++.+.+++++++.++| .+|||+|++..+..++++++++ |+++
T Consensus 192 -~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv 269 (349)
T TIGR03201 192 -AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLV 269 (349)
T ss_pred -eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEE
Confidence 899999999999999999999999876511235777788888877886 8999999887788899999999 9999
Q ss_pred EEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eE
Q 025336 171 VIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VK 249 (254)
Q Consensus 171 ~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k 249 (254)
.+|.... ..++++..++.++.++.|++.. ...+++++++++++|++++.++++ .|||+++++||+.+.+++. +|
T Consensus 270 ~~G~~~~-~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k 344 (349)
T TIGR03201 270 VVGYTMA-KTEYRLSNLMAFHARALGNWGC---PPDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRR 344 (349)
T ss_pred EECcCCC-CcccCHHHHhhcccEEEEEecC---CHHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccce
Confidence 9998754 3455666777678899887643 246799999999999988777775 7999999999999988876 59
Q ss_pred EEEeC
Q 025336 250 VLITI 254 (254)
Q Consensus 250 ~vi~~ 254 (254)
+++++
T Consensus 345 ~~~~~ 349 (349)
T TIGR03201 345 AILTP 349 (349)
T ss_pred EEecC
Confidence 88864
No 22
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.3e-33 Score=234.92 Aligned_cols=217 Identities=24% Similarity=0.405 Sum_probs=181.0
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
+|+|+||+++|++.++++|+++++++++.+++++.|+|+++.....+++|++|||.|+|++|++++|+||.+|+ +|+++
T Consensus 135 ~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~ 213 (360)
T PLN02586 135 YGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVI 213 (360)
T ss_pred CCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEE
Confidence 48999999999999999999999999999999999999998666667899999999999999999999999999 78887
Q ss_pred cCCccc-HHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCce
Q 025336 101 DKNPWK-KEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTM 179 (254)
Q Consensus 101 ~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 179 (254)
+.++++ .+.++++|+++++++++ . +.+++..+ ++|++||++|.+..+..++++++++ |+++.+|.... .
T Consensus 214 ~~~~~~~~~~~~~~Ga~~vi~~~~---~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~-~ 283 (360)
T PLN02586 214 SSSSNKEDEAINRLGADSFLVSTD---P---EKMKAAIG--TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEK-P 283 (360)
T ss_pred eCCcchhhhHHHhCCCcEEEcCCC---H---HHHHhhcC--CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCC-C
Confidence 776655 45667899999998764 3 24444443 6999999999876789999999999 99999997644 3
Q ss_pred eeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 180 VPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 180 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
..+++..++.++..+.|+..+. ..+++++++++++|++++ .+ ++|+|+++++||+.+.+++. +|+||++
T Consensus 284 ~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~--~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 284 LELPIFPLVLGRKLVGGSDIGG---IKETQEMLDFCAKHNITA--DI-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred CccCHHHHHhCCeEEEEcCcCC---HHHHHHHHHHHHhCCCCC--cE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 5566666676888888876432 356899999999999664 34 58999999999999998876 6999864
No 23
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=3.1e-33 Score=233.32 Aligned_cols=230 Identities=28% Similarity=0.423 Sum_probs=194.3
Q ss_pred cCcceeeEEecCC-ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEE
Q 025336 21 CSTWSEYMVIDAN-YVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIG 99 (254)
Q Consensus 21 ~g~~a~~~~v~~~-~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~ 99 (254)
.|+|+||+++|+. .++++|++++++++++++++++|||+++......+++++|||+|+|++|++++|+|+.+|+++|++
T Consensus 128 ~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~ 207 (361)
T cd08231 128 SGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIV 207 (361)
T ss_pred CcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Confidence 4899999999996 799999999999999998999999999966666679999999999999999999999999977999
Q ss_pred EcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-c
Q 025336 100 IDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-T 178 (254)
Q Consensus 100 v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~ 178 (254)
+++++++.++++++|++.++++++.+..++...+.+.+++.++|++|||+|+...+..++++++++ |+++.+|.... .
T Consensus 208 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~ 286 (361)
T cd08231 208 IDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAG 286 (361)
T ss_pred EcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCC
Confidence 989999999999999999888775111223356778888779999999999866789999999999 99999997643 3
Q ss_pred eeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCC--CCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 179 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNK--EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 179 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
..++++..++.+++++.++... ..++++++++++.++ .++++++++++|+++++++||+.+.++..+|+||++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 287 TVPLDPERIVRKNLTIIGVHNY---DPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred ccccCHHHHhhcccEEEEcccC---CchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 4456665667799999988643 356789999999988 666777888899999999999999888778999874
No 24
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=3e-33 Score=230.91 Aligned_cols=246 Identities=26% Similarity=0.386 Sum_probs=201.7
Q ss_pred CCCCcccccCCceeeee-------e-----ccCcceeeEEecCCce-EEcCCCCCccccccccchhhhhhHHHHHhcCCC
Q 025336 2 LDGTSRMSVRGQKLYHI-------F-----SCSTWSEYMVIDANYV-VRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVE 68 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~-------~-----~~g~~a~~~~v~~~~v-~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~ 68 (254)
+|+.|.+|..|...++- . .+|+|+||+++|++.+ .++|+++ ..+++++..++.+++++.......+
T Consensus 89 ~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~ 167 (350)
T COG1063 89 PCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVR 167 (350)
T ss_pred CCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCC
Confidence 57777777766664432 1 2489999999997555 5558887 5566666689999988743455555
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 147 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d 147 (254)
++.+|+|+|+|++|++++++++..|+.+|++++.+++|++++++ .|++.+++... ++....+.+.+++.++|++||
T Consensus 168 ~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~---~~~~~~~~~~t~g~g~D~vie 244 (350)
T COG1063 168 PGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE---DDAGAEILELTGGRGADVVIE 244 (350)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc---ccHHHHHHHHhCCCCCCEEEE
Confidence 66699999999999999999999999899999999999999998 66777766665 477788888998889999999
Q ss_pred cCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceE
Q 025336 148 CTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLT 227 (254)
Q Consensus 148 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (254)
|+|.+..+..++++++++ |+++.+|.+......++...++.+++++.|+.. .....+++.+++++.+|++++..+++
T Consensus 245 ~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~--~~~~~~~~~~~~ll~~g~i~~~~lit 321 (350)
T COG1063 245 AVGSPPALDQALEALRPG-GTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLR--PSGREDFERALDLLASGKIDPEKLIT 321 (350)
T ss_pred CCCCHHHHHHHHHHhcCC-CEEEEEeccCCccCccCHHHHHhcccEEEeccC--CCCcccHHHHHHHHHcCCCChhHceE
Confidence 999988899999999999 999999998762116677788889999999842 12356799999999999999999999
Q ss_pred EEeecccHHHHHHHHcCCC--eeEEEEeC
Q 025336 228 HHVKLEEIDKAIQLLKQPD--CVKVLITI 254 (254)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~--~~k~vi~~ 254 (254)
+.++++++++||+.+.+++ ..|+++.+
T Consensus 322 ~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 322 HRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred eeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9999999999999998754 35999864
No 25
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.3e-33 Score=234.23 Aligned_cols=217 Identities=21% Similarity=0.375 Sum_probs=181.3
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAE-VEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIG 99 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~-~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~ 99 (254)
+|+|+||+++|++.++++|+++++++++.+++++.|+|+++..... .++|++|+|.|+|++|++++|+||.+|+ +|++
T Consensus 129 ~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~ 207 (375)
T PLN02178 129 QGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTV 207 (375)
T ss_pred CCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEE
Confidence 4899999999999999999999999999999999999998744332 3689999999999999999999999999 7888
Q ss_pred EcCCcc-cHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCc
Q 025336 100 IDKNPW-KKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDT 178 (254)
Q Consensus 100 v~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 178 (254)
++.+++ +.+.++++|+++++++++ . +.+.+.+ + ++|++|||+|.+..+..++++++++ |+++.+|....
T Consensus 208 ~~~~~~~~~~~a~~lGa~~~i~~~~---~---~~v~~~~-~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~- 277 (375)
T PLN02178 208 ISRSSEKEREAIDRLGADSFLVTTD---S---QKMKEAV-G-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEK- 277 (375)
T ss_pred EeCChHHhHHHHHhCCCcEEEcCcC---H---HHHHHhh-C-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCC-
Confidence 877654 477888999999998764 2 3455544 3 7999999999876789999999999 99999997644
Q ss_pred eeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 179 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 179 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
..+++...++.+++++.|+..+. ..+++++++++++|++++ .+ +.|||+++++||+.+.+++. +|+||.+
T Consensus 278 ~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~--~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 278 PLDLPIFPLVLGRKMVGGSQIGG---MKETQEMLEFCAKHKIVS--DI-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred CCccCHHHHHhCCeEEEEeCccC---HHHHHHHHHHHHhCCCcc--cE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 45566777777999999987543 356899999999999654 34 57999999999999988876 6998864
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2e-33 Score=231.22 Aligned_cols=229 Identities=21% Similarity=0.249 Sum_probs=193.1
Q ss_pred CCCCCcccccCCceeeee----------------------------eccCcceeeEEecCCceEEcCCCCCccccccccc
Q 025336 1 MLDGTSRMSVRGQKLYHI----------------------------FSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSC 52 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~----------------------------~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~ 52 (254)
+|+++.+|++ ||+|+.. ..+|+|+||+.+|+..++++|+++++++++.+++
T Consensus 71 vG~~v~~~~~-Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~ 149 (329)
T TIGR02822 71 RGADAGGFAV-GDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLC 149 (329)
T ss_pred ECCCCcccCC-CCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhc
Confidence 3677888999 9999621 1248999999999999999999999999999999
Q ss_pred hhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHH
Q 025336 53 GFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISEL 132 (254)
Q Consensus 53 ~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 132 (254)
++.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|+++++++.+ ..
T Consensus 150 ~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~---~~---- 220 (329)
T TIGR02822 150 AGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYD---TP---- 220 (329)
T ss_pred cchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccc---cC----
Confidence 999999998 46889999999999999999999999999999 8999999999999999999999987543 11
Q ss_pred HHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHH
Q 025336 133 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 212 (254)
Q Consensus 133 i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 212 (254)
..++|.++++.+....+..++++++++ |+++.+|...+...++++..++.+++++.++... ...++.+++
T Consensus 221 ------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~ 290 (329)
T TIGR02822 221 ------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSN---TRADAREFL 290 (329)
T ss_pred ------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCccCCCCCHHHHhhCCcEEEEeecC---CHHHHHHHH
Confidence 127899999888777899999999999 9999999754322345666666789999987643 245688899
Q ss_pred HHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEE
Q 025336 213 DKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi 252 (254)
+++++++++ +++++|||+++++||+.+.+++. +|+||
T Consensus 291 ~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 291 ELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 999999965 35789999999999999988877 59887
No 27
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.3e-33 Score=227.46 Aligned_cols=205 Identities=25% Similarity=0.361 Sum_probs=175.4
Q ss_pred cCcceeeEEecCC-ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEE
Q 025336 21 CSTWSEYMVIDAN-YVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIG 99 (254)
Q Consensus 21 ~g~~a~~~~v~~~-~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~ 99 (254)
+|+|+||+++|+. .++++|+++++++++.+++++.|+|+++ ......++++|||+|+|++|++++|+||.+|+.+|++
T Consensus 72 ~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~ 150 (280)
T TIGR03366 72 SGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVA 150 (280)
T ss_pred cccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEE
Confidence 4899999999997 6999999999999999989999999987 4556679999999999999999999999999955899
Q ss_pred EcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-c
Q 025336 100 IDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-T 178 (254)
Q Consensus 100 v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~ 178 (254)
++++++|.+.++++|++.++++.+ ..+.+++.+++.++|++||++|.+..++.++++++++ |+++.+|.... .
T Consensus 151 ~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~ 224 (280)
T TIGR03366 151 ADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSVFPGG 224 (280)
T ss_pred ECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccCCCCC
Confidence 988999999999999999887653 2455666777778999999999887889999999999 99999997543 3
Q ss_pred eeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCC--CCCCCCceEEEeecccH
Q 025336 179 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNK--EFKLHQLLTHHVKLEEI 235 (254)
Q Consensus 179 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 235 (254)
..++++..++.+++++.|+..+ ..++++++++++.++ +++++++++++||++++
T Consensus 225 ~~~i~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 225 PVALDPEQVVRRWLTIRGVHNY---EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred ceeeCHHHHHhCCcEEEecCCC---CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 4567778888899999998643 246799999999984 66777889999999874
No 28
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=2.2e-33 Score=232.24 Aligned_cols=241 Identities=19% Similarity=0.258 Sum_probs=197.3
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecC-CceEEcC-CCCCcc-ccccccchhhhhhHHHHHhcCCCCCCEEEEEcC
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDA-NYVVRVD-PSIDLS-HASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL 78 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~-~~v~~~p-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~ 78 (254)
|.++..|++ ||+|+++ |+|+||+++|+ ..++++| +.++++ ++++++++++|||+++....++++|++|||+|+
T Consensus 85 ~~~v~~~~v-Gd~V~~~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga 160 (338)
T cd08295 85 DSGNPDFKV-GDLVWGF---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAA 160 (338)
T ss_pred ecCCCCCCC-CCEEEec---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 445667889 9999865 67999999999 7999995 678886 788899999999999977889999999999987
Q ss_pred -CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHH
Q 025336 79 -GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS 156 (254)
Q Consensus 79 -g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~ 156 (254)
|++|++++|+||.+|+ +|+++++++++.+++++ +|+++++++.+ ..++.+.+++.++ .++|++||++|+. .+.
T Consensus 161 ~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~-~gvd~v~d~~g~~-~~~ 235 (338)
T cd08295 161 SGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE--EPDLDAALKRYFP-NGIDIYFDNVGGK-MLD 235 (338)
T ss_pred ccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC--cccHHHHHHHhCC-CCcEEEEECCCHH-HHH
Confidence 9999999999999999 89999899999999998 99999998754 1467777877765 5899999999985 789
Q ss_pred HHHHHcccCCcEEEEEccCCCcee-----eccHHHHHhCCCEEEeeecCCCCC--CCCHHHHHHHHhCCCCCCCCceEEE
Q 025336 157 EALETTKVGKGKVIVIGVGVDTMV-----PLNVIALACGGRTLKGTTFGGIKT--KSDLPILLDKCKNKEFKLHQLLTHH 229 (254)
Q Consensus 157 ~~~~~l~~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (254)
.++++++++ |+++.+|...+... ..+...+.++++++.++....+.. ...++++++++.+|++++. +...
T Consensus 236 ~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~ 312 (338)
T cd08295 236 AVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIA 312 (338)
T ss_pred HHHHHhccC-cEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecc
Confidence 999999999 99999987543111 123445666888888866443221 2346788999999996543 4456
Q ss_pred eecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 230 VKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
|+++++++|++.+.+++. +|+|+++
T Consensus 313 ~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 313 DGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred cCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 999999999999988776 5999874
No 29
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=5.7e-33 Score=228.47 Aligned_cols=240 Identities=18% Similarity=0.221 Sum_probs=198.6
Q ss_pred CCCCcc-cccCCceeeeeec-cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE-c-
Q 025336 2 LDGTSR-MSVRGQKLYHIFS-CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVL-G- 77 (254)
Q Consensus 2 g~~~~~-~~~~Gd~v~~~~~-~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~-G- 77 (254)
|+++.+ |++ ||+|+++.+ +|+|+||+++|++.++++|++++++++++++..++|||.++ ..... +++.++|+ |
T Consensus 76 G~~v~~~~~v-Gd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g 152 (324)
T cd08291 76 GGGPLAQSLI-GKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAA 152 (324)
T ss_pred CCCccccCCC-CCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccC
Confidence 667775 999 999997654 38999999999999999999999999998888899998554 55555 45566665 4
Q ss_pred CCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHH
Q 025336 78 LGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSE 157 (254)
Q Consensus 78 ~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~ 157 (254)
+|++|++++|+||.+|+ +|+++++++++.++++++|+++++++++ .++.+.+++.++++++|++||++|+. ....
T Consensus 153 ~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~ 227 (324)
T cd08291 153 ASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGG-LTGQ 227 (324)
T ss_pred ccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcH-HHHH
Confidence 59999999999999999 8999999999999999999999999887 78888899888877999999999987 5678
Q ss_pred HHHHcccCCcEEEEEccCCCcee-eccHHHHHhCCCEEEeeecCCCCC---CCCHHHHHHHHhCCCCCCCCceEEEeecc
Q 025336 158 ALETTKVGKGKVIVIGVGVDTMV-PLNVIALACGGRTLKGTTFGGIKT---KSDLPILLDKCKNKEFKLHQLLTHHVKLE 233 (254)
Q Consensus 158 ~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (254)
.+++++++ |+++.+|...+... .++...++.+++++.++....+.. .+.+++++++++ +. +++.++++|+|+
T Consensus 228 ~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~i~~~~~l~ 303 (324)
T cd08291 228 ILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TE--LKTTFASRYPLA 303 (324)
T ss_pred HHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cc--cccceeeEEcHH
Confidence 89999999 99999997654222 355566667999999988654422 345777888887 66 667788999999
Q ss_pred cHHHHHHHHcCCCe-eEEEEe
Q 025336 234 EIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 234 ~~~~a~~~~~~~~~-~k~vi~ 253 (254)
++++||+.+.+++. +|++|.
T Consensus 304 ~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 304 LTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHHHHHhCCCCCeEEeC
Confidence 99999999988666 698873
No 30
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=5.1e-33 Score=214.11 Aligned_cols=239 Identities=19% Similarity=0.223 Sum_probs=202.2
Q ss_pred CCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccc--cccccchhhhhhHHHHHhcCCCCCCEEEEEcC-C
Q 025336 3 DGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSH--ASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-G 79 (254)
Q Consensus 3 ~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~--aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 79 (254)
+....|++ ||.|.+..+ |+||..++.+.+.|++++.-+.. ...+..+..|||.+|.+.+++++|++|+|.+| |
T Consensus 86 S~~~~f~~-GD~V~~~~G---Wq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaG 161 (340)
T COG2130 86 SNHPGFQP-GDIVVGVSG---WQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAG 161 (340)
T ss_pred cCCCCCCC-CCEEEeccc---ceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEeccc
Confidence 35678999 999998765 99999999999999986532222 23367899999999999999999999999986 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHH
Q 025336 80 TVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEA 158 (254)
Q Consensus 80 ~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~ 158 (254)
++|..+.|+||..|+ +|+.+..++||.+++++ +|.|.++||+. +++.+.+.+..+. ++|+.||++|++ .++..
T Consensus 162 aVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d~~~~L~~a~P~-GIDvyfeNVGg~-v~DAv 235 (340)
T COG2130 162 AVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---EDFAQALKEACPK-GIDVYFENVGGE-VLDAV 235 (340)
T ss_pred ccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---ccHHHHHHHHCCC-CeEEEEEcCCch-HHHHH
Confidence 999999999999999 99999999999999988 99999999999 8999999999886 999999999998 89999
Q ss_pred HHHcccCCcEEEEEccCCC---ceee---ccHHHHHhCCCEEEeeecCC-CCC--CCCHHHHHHHHhCCCCCCCCceEEE
Q 025336 159 LETTKVGKGKVIVIGVGVD---TMVP---LNVIALACGGRTLKGTTFGG-IKT--KSDLPILLDKCKNKEFKLHQLLTHH 229 (254)
Q Consensus 159 ~~~l~~~~G~~v~~g~~~~---~~~~---~~~~~~~~~~~~i~g~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (254)
+..++.+ +|++.||..+. ...+ -....++.+.+++.|+...+ +.. .+..+++.+|+.+|+|+.++ +.+
T Consensus 236 ~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~ 312 (340)
T COG2130 236 LPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIV 312 (340)
T ss_pred HHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eeh
Confidence 9999999 99999997654 1122 22334666899999998733 221 35678899999999988876 445
Q ss_pred eecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 230 VKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
-+||++++||..|.+|++ +|+|+++
T Consensus 313 dGlEnaP~Af~gLl~G~N~GK~vvKv 338 (340)
T COG2130 313 DGLENAPEAFIGLLSGKNFGKLVVKV 338 (340)
T ss_pred hhhhccHHHHHHHhcCCccceEEEEe
Confidence 679999999999999998 5999874
No 31
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.5e-33 Score=228.70 Aligned_cols=239 Identities=23% Similarity=0.336 Sum_probs=187.1
Q ss_pred cccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhc------CCCCCCEEEEEcC-
Q 025336 6 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEA------EVEKGSSVAVLGL- 78 (254)
Q Consensus 6 ~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~~~~vlI~G~- 78 (254)
..+.. |+.+......|+|+||+++|+..++++|+++++++++++|.++.|||+++.... ++++|++|||+|+
T Consensus 89 ~~~~~-g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggs 167 (347)
T KOG1198|consen 89 GGWVH-GDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGS 167 (347)
T ss_pred cceEe-eeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCC
Confidence 34445 666666666799999999999999999999999999999999999999998888 8999999999975
Q ss_pred CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHH
Q 025336 79 GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEA 158 (254)
Q Consensus 79 g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~ 158 (254)
|++|++++|+|++.|+ ..+++.+++++.++++++|+++++||++ +++.+.+.+.+ +.+||+||||+|+. .....
T Consensus 168 ggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~---~~~~e~~kk~~-~~~~DvVlD~vg~~-~~~~~ 241 (347)
T KOG1198|consen 168 GGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD---ENVVELIKKYT-GKGVDVVLDCVGGS-TLTKS 241 (347)
T ss_pred cHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC---HHHHHHHHhhc-CCCccEEEECCCCC-ccccc
Confidence 8999999999999995 4556669999999999999999999999 99999999988 66999999999997 56777
Q ss_pred HHHcccCCcEEEEEccCCCceeeccHHH----HH---hCCCEEEeeecC---CCCCCCCHHHHHHHHhCCCCCCCCceEE
Q 025336 159 LETTKVGKGKVIVIGVGVDTMVPLNVIA----LA---CGGRTLKGTTFG---GIKTKSDLPILLDKCKNKEFKLHQLLTH 228 (254)
Q Consensus 159 ~~~l~~~~G~~v~~g~~~~~~~~~~~~~----~~---~~~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (254)
..++... |+...++............. +. .....+.+.... .....+.++.+.+++++++ +++.+.+
T Consensus 242 ~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gk--ikp~i~~ 318 (347)
T KOG1198|consen 242 LSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGK--IKPVIDS 318 (347)
T ss_pred hhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCc--ccCCcce
Confidence 7788777 76555554432111111000 00 011111111111 1122566888999999997 7788999
Q ss_pred EeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 229 HVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
.||++++.+||+.+.++.. +|+++.+
T Consensus 319 ~~p~~~~~ea~~~~~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 319 VYPFSQAKEAFEKLEKSHATGKVVLEK 345 (347)
T ss_pred eeeHHHHHHHHHHHhhcCCcceEEEEe
Confidence 9999999999999887655 6998864
No 32
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.6e-32 Score=229.01 Aligned_cols=226 Identities=22% Similarity=0.300 Sum_probs=179.0
Q ss_pred cCcceeeEEecCC--ceEEcCCCCCc----cccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC
Q 025336 21 CSTWSEYMVIDAN--YVVRVDPSIDL----SHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGA 94 (254)
Q Consensus 21 ~g~~a~~~~v~~~--~v~~~p~~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~ 94 (254)
+|+|+||+++|+. .++++|++++. .+++.+.+++.++|+++ .+.+++++++|||.|+|++|++++|+|+.+|+
T Consensus 132 ~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga 210 (393)
T TIGR02819 132 VGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGA 210 (393)
T ss_pred CCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 4899999999964 69999997653 34667778899999987 56889999999999899999999999999999
Q ss_pred CeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCCh--------------hHHHHHHH
Q 025336 95 AKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP--------------SLLSEALE 160 (254)
Q Consensus 95 ~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~--------------~~~~~~~~ 160 (254)
+.+++++.++++.+.++++|++.+....+ .++.+.+.+.+++.++|++|||+|.+ ..++.+++
T Consensus 211 ~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~ 287 (393)
T TIGR02819 211 AVVIVGDLNPARLAQARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLME 287 (393)
T ss_pred ceEEEeCCCHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHH
Confidence 55666677888999999999975433333 46777788888777899999999985 37899999
Q ss_pred HcccCCcEEEEEccCCC-ce-----------eeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceE-
Q 025336 161 TTKVGKGKVIVIGVGVD-TM-----------VPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLT- 227 (254)
Q Consensus 161 ~l~~~~G~~v~~g~~~~-~~-----------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 227 (254)
+++++ |+++.+|.+.. .. +++....+..+++++.|.. ....+++.++++++.+|++++.++++
T Consensus 288 ~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~ 363 (393)
T TIGR02819 288 VTRVG-GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNV 363 (393)
T ss_pred HhhCC-CEEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceec
Confidence 99999 99999998632 11 1233334444666666532 11123347899999999998887777
Q ss_pred EEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 228 HHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
++|||+++++||+.+.+++.+|++|++
T Consensus 364 ~~~~l~~~~~a~~~~~~~~~~Kvvi~~ 390 (393)
T TIGR02819 364 TVISLDDAPEGYAEFDAGAAKKFVIDP 390 (393)
T ss_pred ceecHHHHHHHHHHHhhCCceEEEEeC
Confidence 689999999999999888778999874
No 33
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=5.3e-32 Score=226.01 Aligned_cols=227 Identities=40% Similarity=0.700 Sum_probs=197.0
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
.|+|++|+.++++.++++|+++++++++.+++++.+||+++.....++++++|||+|+|++|++++++|+.+|+..|+++
T Consensus 135 ~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~ 214 (365)
T cd05279 135 TSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAV 214 (365)
T ss_pred cccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 37899999999999999999999999999999999999998888899999999999889999999999999999557888
Q ss_pred cCCcccHHHHHhcCCceEeCCCCCCCc--hHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcc-cCCcEEEEEccCCC
Q 025336 101 DKNPWKKEKGEAFGMTDFINPDDEPNK--SISELVKGITHGMGVDYCFECTGVPSLLSEALETTK-VGKGKVIVIGVGVD 177 (254)
Q Consensus 101 ~~~~~~~~~~~~~g~~~v~~~~~~~~~--~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~ 177 (254)
++++++.+.++++|+++++++++ . ++.+.+.++++ .++|+++|++|....+..++++++ ++ |+++.+|....
T Consensus 215 ~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~ 289 (365)
T cd05279 215 DINKDKFEKAKQLGATECINPRD---QDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPS 289 (365)
T ss_pred eCCHHHHHHHHHhCCCeeccccc---ccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCC
Confidence 88999999999999999998876 5 67777887775 589999999987668899999999 98 99999987642
Q ss_pred -ceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEe
Q 025336 178 -TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 253 (254)
Q Consensus 178 -~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 253 (254)
....++...+ .++.++.|....++...+.+..++++++++.+++.+.+++.++++++++||+.+.+++..|++++
T Consensus 290 ~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 290 GTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred CCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 3456666666 58889999877666667789999999999998776677889999999999999988877788764
No 34
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=6.1e-32 Score=225.63 Aligned_cols=227 Identities=30% Similarity=0.531 Sum_probs=194.6
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
.|+|++|+++++..++++|+++++++++.++++++||+.++.....++++++|||+|+|++|++++|+|+..|+.+++++
T Consensus 138 ~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~ 217 (365)
T cd08278 138 QSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAV 217 (365)
T ss_pred ccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 48899999999999999999999999999999999999998788889999999999889999999999999999669999
Q ss_pred cCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-ce
Q 025336 101 DKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-TM 179 (254)
Q Consensus 101 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~ 179 (254)
++++++.+.++++|++.++++++ .++.+.+.+.+ +.++|+++||+|.+..+..++++++++ |+++.+|.... ..
T Consensus 218 ~~~~~k~~~~~~~g~~~~i~~~~---~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~ 292 (365)
T cd08278 218 DIVDSRLELAKELGATHVINPKE---EDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAE 292 (365)
T ss_pred eCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCc
Confidence 89999999999999999998886 67778888877 568999999999766889999999999 99999997642 34
Q ss_pred eeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEe
Q 025336 180 VPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 253 (254)
Q Consensus 180 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 253 (254)
..++...+..++.++.++........+.+++++++++++++++.+.+ ..++++++++|++.+.++...|++|+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 293 VTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred cccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 55666666568999988765433234567889999999997543344 47999999999999988877899874
No 35
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=5.4e-32 Score=225.17 Aligned_cols=217 Identities=23% Similarity=0.378 Sum_probs=181.3
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
.|+|+||+++|+..++++|+++++++++.+++++.|||+++......++|++++|+|+|++|++++|+||.+|+ +++++
T Consensus 132 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~ 210 (357)
T PLN02514 132 QGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVI 210 (357)
T ss_pred CCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEE
Confidence 48999999999999999999999999999999999999998666666899999999999999999999999999 78888
Q ss_pred cCCcccHHHH-HhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCce
Q 025336 101 DKNPWKKEKG-EAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTM 179 (254)
Q Consensus 101 ~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 179 (254)
+.++++.+.+ +++|++.++++.+ . ..+.+.+. ++|++|||+|....+..++++++++ |+++.+|.... .
T Consensus 211 ~~~~~~~~~~~~~~Ga~~~i~~~~---~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~-~ 280 (357)
T PLN02514 211 SSSDKKREEALEHLGADDYLVSSD---A---AEMQEAAD--SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT-P 280 (357)
T ss_pred eCCHHHHHHHHHhcCCcEEecCCC---h---HHHHHhcC--CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC-C
Confidence 7777666554 6699988877654 2 23444432 7999999999766889999999999 99999998754 3
Q ss_pred eeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 180 VPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 180 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
.+++...++.+++++.|+..+. ..+++++++++++|++ ++.+ ++|||+++.+||+.+.+++. +|+||.+
T Consensus 281 ~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l--~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 281 LQFVTPMLMLGRKVITGSFIGS---MKETEEMLEFCKEKGL--TSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDV 350 (357)
T ss_pred CcccHHHHhhCCcEEEEEecCC---HHHHHHHHHHHHhCCC--cCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEc
Confidence 4566667777999999987543 3568999999999984 4555 58999999999999998877 5998864
No 36
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=2.9e-31 Score=221.97 Aligned_cols=230 Identities=38% Similarity=0.657 Sum_probs=192.7
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
.|+|+||+++|+..++++|+++++++++++++++.+||+++....+++++++|||+|+|++|++++++++.+|+.+|+++
T Consensus 142 ~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~ 221 (373)
T cd08299 142 TSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAV 221 (373)
T ss_pred CCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 48899999999999999999999999999999999999998788899999999999989999999999999998679999
Q ss_pred cCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHc-ccCCcEEEEEccCCC-c
Q 025336 101 DKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT-KVGKGKVIVIGVGVD-T 178 (254)
Q Consensus 101 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~-~ 178 (254)
++++++++.++++|++++++..+ ...+....+.+++++ ++|.++||+|++..+..++..+ +++ |+++.+|.... .
T Consensus 222 ~~~~~~~~~a~~lGa~~~i~~~~-~~~~~~~~v~~~~~~-~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~ 298 (373)
T cd08299 222 DINKDKFAKAKELGATECINPQD-YKKPIQEVLTEMTDG-GVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQ 298 (373)
T ss_pred cCCHHHHHHHHHcCCceEecccc-cchhHHHHHHHHhCC-CCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCc
Confidence 99999999999999999998764 112366777777664 8999999999766777767665 567 99999997654 2
Q ss_pred eeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 179 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 179 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
..++++..+. ++.++.++..+.+.+...+.++++.+.++.+++++.+++.|+++++++||+.+.+++..|+++++
T Consensus 299 ~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 299 NLSINPMLLL-TGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred eeecCHHHHh-cCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 4555554344 78899998876655556777888888888777777788899999999999999887777988864
No 37
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=4.7e-32 Score=221.19 Aligned_cols=225 Identities=18% Similarity=0.248 Sum_probs=178.1
Q ss_pred CCCCcccccCCceeeeee---------ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCE
Q 025336 2 LDGTSRMSVRGQKLYHIF---------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSS 72 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~ 72 (254)
|+++ .|++ ||+|+... ..|+|+||+++|++.++++|+.++++. +.+ .++.|||+++.. . ..++++
T Consensus 74 G~~v-~~~v-GdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~~~~~ 147 (308)
T TIGR01202 74 GPDT-GFRP-GDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EVKVLP 147 (308)
T ss_pred cCCC-CCCC-CCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-ccCCCc
Confidence 5666 5999 99998521 149999999999999999999998864 444 457899999843 3 336889
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCCh
Q 025336 73 VAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP 152 (254)
Q Consensus 73 vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~ 152 (254)
+||+|+|++|++++|+||.+|+..|++++.++++++.++++ .++++.+ . .+.++|++|||+|++
T Consensus 148 vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~----------~~~g~Dvvid~~G~~ 211 (308)
T TIGR01202 148 DLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D----------PRRDYRAIYDASGDP 211 (308)
T ss_pred EEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c----------cCCCCCEEEECCCCH
Confidence 99999999999999999999995566777777776665543 4555432 1 234899999999997
Q ss_pred hHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeec
Q 025336 153 SLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKL 232 (254)
Q Consensus 153 ~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (254)
..++.++++++++ |+++.+|.... ..++++..++.+++++.++..+ ..++++++++++++|+++++++++++|||
T Consensus 212 ~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~g~i~~~~~it~~~~l 286 (308)
T TIGR01202 212 SLIDTLVRRLAKG-GEIVLAGFYTE-PVNFDFVPAFMKEARLRIAAEW---QPGDLHAVRELIESGALSLDGLITHQRPA 286 (308)
T ss_pred HHHHHHHHhhhcC-cEEEEEeecCC-CcccccchhhhcceEEEEeccc---chhHHHHHHHHHHcCCCChhhccceeecH
Confidence 6789999999999 99999998654 3455555666688999887533 24679999999999999888889999999
Q ss_pred ccHHHHHHHHcCCC-eeEEEEe
Q 025336 233 EEIDKAIQLLKQPD-CVKVLIT 253 (254)
Q Consensus 233 ~~~~~a~~~~~~~~-~~k~vi~ 253 (254)
+++++||+.+.++. .+|++|+
T Consensus 287 ~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 287 SDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHHHHHHHhcCcCceEEEeC
Confidence 99999999876554 4799874
No 38
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.1e-31 Score=221.77 Aligned_cols=218 Identities=28% Similarity=0.337 Sum_probs=171.7
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHH------HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAW------KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGA 94 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~------~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~ 94 (254)
+|+|+||+++|+..++++|++++ ++ +.+..++.+++.++. ....++++++|||+|+|++|++++|+||.+|+
T Consensus 120 ~G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~ 197 (355)
T cd08230 120 HGFMREYFVDDPEYLVKVPPSLA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF 197 (355)
T ss_pred CccceeEEEeccccEEECCCCCC-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 48899999999999999999998 44 444456655554432 22336789999999999999999999999999
Q ss_pred CeEEEEcC---CcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEE
Q 025336 95 AKIIGIDK---NPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV 171 (254)
Q Consensus 95 ~~v~~v~~---~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 171 (254)
+|+++++ ++++.+.++++|++. +++.+ +++.+ .+ . ..++|++|||+|.+..+..+++.++++ |+++.
T Consensus 198 -~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~---~~~~~-~~--~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~ 267 (355)
T cd08230 198 -EVYVLNRRDPPDPKADIVEELGATY-VNSSK---TPVAE-VK--L-VGEFDLIIEATGVPPLAFEALPALAPN-GVVIL 267 (355)
T ss_pred -eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc---cchhh-hh--h-cCCCCEEEECcCCHHHHHHHHHHccCC-cEEEE
Confidence 8999987 678999999999986 56655 44433 21 1 238999999999876789999999999 99999
Q ss_pred EccCCC-ceeecc----HHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCC----CCCCceEEEeecccHHHHHHHH
Q 025336 172 IGVGVD-TMVPLN----VIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEF----KLHQLLTHHVKLEEIDKAIQLL 242 (254)
Q Consensus 172 ~g~~~~-~~~~~~----~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~a~~~~ 242 (254)
+|...+ ...+++ ...++.+++++.|+... ..++++++++++.++.+ .++++++++|+++++++||+.+
T Consensus 268 ~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~ 344 (355)
T cd08230 268 FGVPGGGREFEVDGGELNRDLVLGNKALVGSVNA---NKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEK 344 (355)
T ss_pred EecCCCCCccccChhhhhhhHhhcCcEEEEecCC---chhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhc
Confidence 998765 344454 34566799999998643 24678999999988772 3667889999999999999988
Q ss_pred cCCCeeEEEEeC
Q 025336 243 KQPDCVKVLITI 254 (254)
Q Consensus 243 ~~~~~~k~vi~~ 254 (254)
.++. +|++|++
T Consensus 345 ~~~~-~K~v~~~ 355 (355)
T cd08230 345 PDGE-IKVVIEW 355 (355)
T ss_pred ccCC-eEEEeeC
Confidence 7654 5999874
No 39
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.6e-31 Score=219.46 Aligned_cols=245 Identities=24% Similarity=0.385 Sum_probs=202.2
Q ss_pred CCCCcccccCCceeeeee------------------------------ccCcceeeEEecCC--ceEEcCCCCCcccccc
Q 025336 2 LDGTSRMSVRGQKLYHIF------------------------------SCSTWSEYMVIDAN--YVVRVDPSIDLSHASF 49 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~------------------------------~~g~~a~~~~v~~~--~v~~~p~~~~~~~aa~ 49 (254)
|+++.++++ ||+|+... ..|+|+||+.+|.. .++++|+++++++++.
T Consensus 69 G~~v~~~~~-Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~ 147 (351)
T cd08285 69 GSEVKDFKP-GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVM 147 (351)
T ss_pred cCCcCccCC-CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhh
Confidence 667778899 99998632 24899999999974 8999999999999999
Q ss_pred ccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchH
Q 025336 50 LSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSI 129 (254)
Q Consensus 50 ~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 129 (254)
++.+++||++++ ...+++++++|||+|+|++|++++|+|+.+|+..|+++++++++.+.++++|++.++++.+ .++
T Consensus 148 ~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~ 223 (351)
T cd08285 148 LPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN---GDV 223 (351)
T ss_pred hccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC---CCH
Confidence 999999999996 7788999999999988999999999999999966899989999999999999999999887 778
Q ss_pred HHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-ceeeccH--HHHHhCCCEEEeeecCCCCCCC
Q 025336 130 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-TMVPLNV--IALACGGRTLKGTTFGGIKTKS 206 (254)
Q Consensus 130 ~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~--~~~~~~~~~i~g~~~~~~~~~~ 206 (254)
...+.++.++.++|+++||+|++..+..++++++++ |+++.+|.... ....++. .....+..++.+.... ...+
T Consensus 224 ~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~ 300 (351)
T cd08285 224 VEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP--GGRL 300 (351)
T ss_pred HHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC--Cccc
Confidence 888888777778999999999876889999999999 99999997664 2334432 2223356666654321 1356
Q ss_pred CHHHHHHHHhCCCCCCCC-ceEEEeecccHHHHHHHHcCCCe--eEEEEeC
Q 025336 207 DLPILLDKCKNKEFKLHQ-LLTHHVKLEEIDKAIQLLKQPDC--VKVLITI 254 (254)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~--~k~vi~~ 254 (254)
.++++++++++|++++.. .+.+.++++++++||+.+.+++. +|++|.+
T Consensus 301 ~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 301 RMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred cHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 799999999999987743 34456899999999999988763 6999874
No 40
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.3e-31 Score=220.48 Aligned_cols=235 Identities=17% Similarity=0.177 Sum_probs=191.6
Q ss_pred cccccCCceeeeeeccCcceeeEEecCCceEEc----CCCCCcccc-ccccchhhhhhHHHHHhcCCCCCCEEEEEcC-C
Q 025336 6 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRV----DPSIDLSHA-SFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-G 79 (254)
Q Consensus 6 ~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~----p~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 79 (254)
..|++ ||+|+++ ++|++|++++.+.+.++ |++++++++ ++++++++|||+++....++++|++|||+|+ |
T Consensus 74 ~~~~~-GdrV~~~---~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g 149 (325)
T TIGR02825 74 VALPK-GTIVLAS---PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAG 149 (325)
T ss_pred CCCCC-CCEEEEe---cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCcc
Confidence 45888 9999975 46999999999888887 899999987 6788999999999888899999999999985 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCc-hHHHHHHHhhCCCCccEEEEcCCChhHHHHH
Q 025336 80 TVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNK-SISELVKGITHGMGVDYCFECTGVPSLLSEA 158 (254)
Q Consensus 80 ~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~ 158 (254)
++|++++|+||..|+ +|+++++++++.++++++|++.++++++ . ++.+.+++..+ +++|++|||+|++ .+..+
T Consensus 150 ~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~---~~~~~~~~~~~~~-~gvdvv~d~~G~~-~~~~~ 223 (325)
T TIGR02825 150 AVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT---VKSLEETLKKASP-DGYDCYFDNVGGE-FSNTV 223 (325)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc---cccHHHHHHHhCC-CCeEEEEECCCHH-HHHHH
Confidence 999999999999999 8999999999999999999999999875 3 45556666554 4899999999987 67999
Q ss_pred HHHcccCCcEEEEEccCCC-c---eee--ccHHHHHhCCCEEEeeecCCCCC---CCCHHHHHHHHhCCCCCCCCceEEE
Q 025336 159 LETTKVGKGKVIVIGVGVD-T---MVP--LNVIALACGGRTLKGTTFGGIKT---KSDLPILLDKCKNKEFKLHQLLTHH 229 (254)
Q Consensus 159 ~~~l~~~~G~~v~~g~~~~-~---~~~--~~~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (254)
+++++++ |+++.+|...+ . ..+ .....+.++++++.++....+.. .+.++++++++++|++++. +...
T Consensus 224 ~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~ 300 (325)
T TIGR02825 224 IGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVI 300 (325)
T ss_pred HHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eecc
Confidence 9999999 99999987542 1 111 12334556888888876433211 2357889999999996654 4456
Q ss_pred eecccHHHHHHHHcCCCe-eEEEEe
Q 025336 230 VKLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 230 ~~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
|+++++++|++.+.+++. +|+|++
T Consensus 301 ~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 301 EGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred ccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 899999999999988776 588874
No 41
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=2.9e-31 Score=218.33 Aligned_cols=242 Identities=20% Similarity=0.206 Sum_probs=204.9
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-CH
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GT 80 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 80 (254)
|+++..+++ ||+|+++...|+|++|+.+++..++++|+++++++++.++..+.+||+++ ...++++|++|||+|+ |.
T Consensus 74 G~~v~~~~~-Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ 151 (324)
T cd08292 74 GEGVKGLQV-GQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGA 151 (324)
T ss_pred CCCCCCCCC-CCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccH
Confidence 667778999 99999876469999999999999999999999999999988999999987 5688999999999986 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHH
Q 025336 81 VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 160 (254)
Q Consensus 81 ~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~ 160 (254)
+|++++|+|+.+|+ +++++..++++.+.++++|++.++++++ .++...+.+.++++++|++|||+|+. ....+++
T Consensus 152 ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~ 226 (324)
T cd08292 152 VGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQ---PGWQDKVREAAGGAPISVALDSVGGK-LAGELLS 226 (324)
T ss_pred HHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCC---chHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHH
Confidence 99999999999999 8899888888889888899999998887 78888899998888999999999986 6789999
Q ss_pred HcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCC-------CCCHHHHHHHHhCCCCCCCCceEEEeecc
Q 025336 161 TTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPILLDKCKNKEFKLHQLLTHHVKLE 233 (254)
Q Consensus 161 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (254)
+++++ |+++.+|.......++++..+..++.++.++....+.. ...++.+++++.++.+++. +.+.|+++
T Consensus 227 ~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~ 303 (324)
T cd08292 227 LLGEG-GTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLG 303 (324)
T ss_pred hhcCC-cEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHH
Confidence 99999 99999987543344555555666999999987543221 2357889999999996643 46789999
Q ss_pred cHHHHHHHHcCCCe-eEEEEe
Q 025336 234 EIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 234 ~~~~a~~~~~~~~~-~k~vi~ 253 (254)
++.+||+.+.++.. .|++++
T Consensus 304 ~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 304 DAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHHHHHcCCCCceEEeC
Confidence 99999999877655 588763
No 42
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=3.2e-31 Score=224.28 Aligned_cols=247 Identities=20% Similarity=0.228 Sum_probs=195.0
Q ss_pred CCCCCc-ccccCCceeeeee----------------ccCcceeeEEecCC----ceEEcCCCCCccccccc-cch-hhhh
Q 025336 1 MLDGTS-RMSVRGQKLYHIF----------------SCSTWSEYMVIDAN----YVVRVDPSIDLSHASFL-SCG-FTTG 57 (254)
Q Consensus 1 ~g~~~~-~~~~~Gd~v~~~~----------------~~g~~a~~~~v~~~----~v~~~p~~~~~~~aa~~-~~~-~~ta 57 (254)
+|+++. +|++ ||+|+... .+|+|+||+++|+. .++++|+++++++++.+ +.. ..++
T Consensus 77 vG~~v~~~~~v-GdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~ 155 (410)
T cd08238 77 VGKKWQGKYKP-GQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGA 155 (410)
T ss_pred eCCCccCCCCC-CCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHH
Confidence 367776 5999 99997531 24899999999986 68999999999988865 211 1123
Q ss_pred hHHH--------HHhcCCCCCCEEEEEc-CCHHHHHHHHHHHHcC--CCeEEEEcCCcccHHHHHhc--------CCc-e
Q 025336 58 FGAA--------WKEAEVEKGSSVAVLG-LGTVGLGAVDGARMQG--AAKIIGIDKNPWKKEKGEAF--------GMT-D 117 (254)
Q Consensus 58 ~~~l--------~~~~~~~~~~~vlI~G-~g~~G~~~~~~a~~~g--~~~v~~v~~~~~~~~~~~~~--------g~~-~ 117 (254)
+.++ ..+.++++|++|+|+| +|++|++++|+||.+| +.+|++++.++++++.++++ |++ .
T Consensus 156 ~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~ 235 (410)
T cd08238 156 YTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELL 235 (410)
T ss_pred hhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEE
Confidence 3332 2457889999999997 5999999999999975 44799999999999999997 766 4
Q ss_pred EeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCC-C-ceeeccHHHHHhCCCEEE
Q 025336 118 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV-D-TMVPLNVIALACGGRTLK 195 (254)
Q Consensus 118 v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~-~~~~~~~~~~~~~~~~i~ 195 (254)
++++++ .+++.+.+++++++.++|++||++|.+..+..++++++++ |+++.++... . ...+++...++.+++++.
T Consensus 236 ~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~ 312 (410)
T cd08238 236 YVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNFYNVHYNNTHYV 312 (410)
T ss_pred EECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEEEEEccCCCCccccccHHHhhhcCcEEE
Confidence 677653 1467778888888879999999999877899999999998 8887765432 2 234667777778999999
Q ss_pred eeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 196 GTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 196 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
|+..+ ...+++++++++++|++++.++++++|||+++++||+.+..+..+|+||.+
T Consensus 313 g~~~~---~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~gKvvl~~ 368 (410)
T cd08238 313 GTSGG---NTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGGKKLIYT 368 (410)
T ss_pred EeCCC---CHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCceEEEEC
Confidence 98643 245789999999999998888999999999999999999844446999864
No 43
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.9e-31 Score=218.76 Aligned_cols=237 Identities=20% Similarity=0.201 Sum_probs=193.7
Q ss_pred CcccccCCceeeeeeccCcceeeEEecCC---ceEEcCCCCC--c---cccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 025336 5 TSRMSVRGQKLYHIFSCSTWSEYMVIDAN---YVVRVDPSID--L---SHASFLSCGFTTGFGAAWKEAEVEKGSSVAVL 76 (254)
Q Consensus 5 ~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~---~v~~~p~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~ 76 (254)
+..|++ ||+|+++ ++|++|+++++. .++++|++++ + ..+++++.+++|||+++....++++|++|||+
T Consensus 75 ~~~~~~-Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ 150 (329)
T cd08294 75 NSKFPV-GTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVN 150 (329)
T ss_pred CCCCCC-CCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 356888 9999864 469999999999 9999999988 2 22346788999999999888999999999999
Q ss_pred cC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHH
Q 025336 77 GL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLL 155 (254)
Q Consensus 77 G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~ 155 (254)
|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++++++ .++.+.+++.++ .++|++||++|+. .+
T Consensus 151 ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~---~~~~~~v~~~~~-~gvd~vld~~g~~-~~ 224 (329)
T cd08294 151 GAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT---VSLEEALKEAAP-DGIDCYFDNVGGE-FS 224 (329)
T ss_pred cCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHCC-CCcEEEEECCCHH-HH
Confidence 85 9999999999999999 8999999999999999999999999987 788888888776 5899999999985 78
Q ss_pred HHHHHHcccCCcEEEEEccCCC-ce-----eeccHHHHHhCCCEEEeeecCCCC--CCCCHHHHHHHHhCCCCCCCCceE
Q 025336 156 SEALETTKVGKGKVIVIGVGVD-TM-----VPLNVIALACGGRTLKGTTFGGIK--TKSDLPILLDKCKNKEFKLHQLLT 227 (254)
Q Consensus 156 ~~~~~~l~~~~G~~v~~g~~~~-~~-----~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 227 (254)
..++++++++ |+++.+|.... .. .......+..+++++.++....+. ..+.+++++++++++++++. ..
T Consensus 225 ~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~ 301 (329)
T cd08294 225 STVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EH 301 (329)
T ss_pred HHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cc
Confidence 9999999999 99999985432 11 122233456688999887654321 12346778899999997654 33
Q ss_pred EEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 228 HHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
..++++++++|++.+.+++. +|+|+++
T Consensus 302 ~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 302 VTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred cccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 46899999999999988776 5999875
No 44
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.7e-31 Score=203.94 Aligned_cols=233 Identities=19% Similarity=0.220 Sum_probs=193.4
Q ss_pred CCCCCcccccCCceeeeee-ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-
Q 025336 1 MLDGTSRMSVRGQKLYHIF-SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL- 78 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~-~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~- 78 (254)
+|+++..|++ ||.|+-.. +.|+|++|.+.+++.++++++.++++.||++.++.+|||.+|.+..++++|++|.-.|+
T Consensus 92 vGs~vkgfk~-Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNgan 170 (354)
T KOG0025|consen 92 VGSNVKGFKP-GDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGAN 170 (354)
T ss_pred ecCCcCccCC-CCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcc
Confidence 4788888999 99998543 44999999999999999999999999999999999999999999999999999988887
Q ss_pred CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhH
Q 025336 79 GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSL 154 (254)
Q Consensus 79 g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~ 154 (254)
+++|++.+|+||++|+ +.+.+.|+....+.+ +.+||++||...+. .-.+..+......++.+.+||+|+. +
T Consensus 171 S~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel---~~~~~~k~~~~~~~prLalNcVGGk-s 245 (354)
T KOG0025|consen 171 SGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKSLGATEVITEEEL---RDRKMKKFKGDNPRPRLALNCVGGK-S 245 (354)
T ss_pred cHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHHcCCceEecHHHh---cchhhhhhhccCCCceEEEeccCch-h
Confidence 9999999999999999 788888998777765 45899999965441 1111112222345899999999998 5
Q ss_pred HHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCC--------CCHHHHHHHHhCCCCCCCCce
Q 025336 155 LSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTK--------SDLPILLDKCKNKEFKLHQLL 226 (254)
Q Consensus 155 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 226 (254)
...+.+.|.++ |.++.||..+.++.+++...++++++.++|+++..|... +.+.++.+++.+|++...+
T Consensus 246 a~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~-- 322 (354)
T KOG0025|consen 246 ATEIARYLERG-GTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN-- 322 (354)
T ss_pred HHHHHHHHhcC-ceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc--
Confidence 57888999999 999999998888888998899999999999999888642 3466788999999965443
Q ss_pred EEEeecccHHHHHHHH
Q 025336 227 THHVKLEEIDKAIQLL 242 (254)
Q Consensus 227 ~~~~~~~~~~~a~~~~ 242 (254)
....+|++...|++..
T Consensus 323 ~e~v~L~~~~tald~~ 338 (354)
T KOG0025|consen 323 CEKVPLADHKTALDAA 338 (354)
T ss_pred ceeeechhhhHHHHHH
Confidence 3567898887877744
No 45
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=4.6e-31 Score=219.01 Aligned_cols=243 Identities=20% Similarity=0.245 Sum_probs=188.5
Q ss_pred CCCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccc----cccccchhhhhhHHHHHhcCCCCC--CEEE
Q 025336 1 MLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSH----ASFLSCGFTTGFGAAWKEAEVEKG--SSVA 74 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~~--~~vl 74 (254)
+|+++..|++ ||+|+++. ++|+||+++|++.++++|+++++++ +++++.++.|||+++....+++++ ++||
T Consensus 83 vG~~v~~~~~-Gd~V~~~~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~Vl 159 (345)
T cd08293 83 EESKHQKFAV-GDIVTSFN--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMV 159 (345)
T ss_pred eccCCCCCCC-CCEEEecC--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEE
Confidence 3678888999 99998753 6799999999999999999865433 445678899999998777788876 9999
Q ss_pred EEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCCh
Q 025336 75 VLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP 152 (254)
Q Consensus 75 I~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~ 152 (254)
|+|+ |++|++++|+||.+|+.+|++++.++++.+++++ +|+++++++++ .++.+.++++++ +++|++|||+|+.
T Consensus 160 I~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~---~~~~~~i~~~~~-~gvd~vid~~g~~ 235 (345)
T cd08293 160 VSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT---DNVAERLRELCP-EGVDVYFDNVGGE 235 (345)
T ss_pred EECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC---CCHHHHHHHHCC-CCceEEEECCCcH
Confidence 9987 9999999999999998569999899999999876 99999999887 788888888876 5899999999987
Q ss_pred hHHHHHHHHcccCCcEEEEEccCCC--cee----ecc--HHHHH-hCCCEEEeeecCCCCC--CCCHHHHHHHHhCCCCC
Q 025336 153 SLLSEALETTKVGKGKVIVIGVGVD--TMV----PLN--VIALA-CGGRTLKGTTFGGIKT--KSDLPILLDKCKNKEFK 221 (254)
Q Consensus 153 ~~~~~~~~~l~~~~G~~v~~g~~~~--~~~----~~~--~~~~~-~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~ 221 (254)
.+..++++++++ |+++.+|.... ... .+. ...+. .++++..+........ .+.++++++++++++++
T Consensus 236 -~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~ 313 (345)
T cd08293 236 -ISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLK 313 (345)
T ss_pred -HHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCcc
Confidence 679999999999 99999985321 111 111 11122 2344443332221111 23466788899999966
Q ss_pred CCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 222 LHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 222 ~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+. ....++++++++||+.+.+++. +|+|+++
T Consensus 314 ~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 314 VK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred ce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 44 4445699999999999988776 5999875
No 46
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.9e-30 Score=216.65 Aligned_cols=228 Identities=36% Similarity=0.631 Sum_probs=195.9
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
.|+|++|+.++++.++++|+++++++++.+++++.+||.++....++.++++|||+|+|++|++++++++..|+.+|+++
T Consensus 134 ~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~ 213 (363)
T cd08279 134 LGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAV 213 (363)
T ss_pred CccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEE
Confidence 48999999999999999999999999999999999999998888899999999999889999999999999999448999
Q ss_pred cCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-ce
Q 025336 101 DKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-TM 179 (254)
Q Consensus 101 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~ 179 (254)
+.++++.+.++++|++++++++. .++...+.++..++++|+++|++++...+...+++++++ |+++.+|.... ..
T Consensus 214 ~~~~~~~~~~~~~g~~~vv~~~~---~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~ 289 (363)
T cd08279 214 DPVPEKLELARRFGATHTVNASE---DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGET 289 (363)
T ss_pred cCCHHHHHHHHHhCCeEEeCCCC---ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcc
Confidence 89999999999999999998886 678888888876668999999999766789999999999 99999987653 34
Q ss_pred eeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEE
Q 025336 180 VPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 252 (254)
Q Consensus 180 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 252 (254)
..++...+..++..+.++.++.....+.+++++++++++.++..+.+.++++++++++||+.+.+++..|.||
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 290 VSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 5566666666788888876554344567889999999999776555777899999999999998887766665
No 47
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.8e-31 Score=220.72 Aligned_cols=228 Identities=19% Similarity=0.244 Sum_probs=179.2
Q ss_pred cccccCCceeeeee------------------------ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHH
Q 025336 6 SRMSVRGQKLYHIF------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAA 61 (254)
Q Consensus 6 ~~~~~~Gd~v~~~~------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l 61 (254)
..|++ ||+|+... .+|+|+||+++|++.++++|+++++++|+.+ .+++++++++
T Consensus 76 ~~~~v-GdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~ 153 (341)
T cd08237 76 GTYKV-GTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAI 153 (341)
T ss_pred CccCC-CCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHH
Confidence 36889 99997421 2488999999999999999999999987755 6888999987
Q ss_pred HH--hcCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhC
Q 025336 62 WK--EAEVEKGSSVAVLGLGTVGLGAVDGARM-QGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 62 ~~--~~~~~~~~~vlI~G~g~~G~~~~~~a~~-~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
.. ...+++|++|||+|+|++|++++|+++. .|..+|++++++++|++.+++.+++..++ ++ ..
T Consensus 154 ~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~-------~~-------~~ 219 (341)
T cd08237 154 SRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID-------DI-------PE 219 (341)
T ss_pred HHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh-------hh-------hh
Confidence 53 3456889999999999999999999996 66558999999999999998766553321 11 11
Q ss_pred CCCccEEEEcCCC---hhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHH
Q 025336 139 GMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKC 215 (254)
Q Consensus 139 ~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 215 (254)
..++|++||++|+ +..+..++++++++ |+++.+|.... ..++++..++.+++++.|+... ...+++++++++
T Consensus 220 ~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~~~ 294 (341)
T cd08237 220 DLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEY-PVPINTRMVLEKGLTLVGSSRS---TREDFERAVELL 294 (341)
T ss_pred ccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCC-CcccCHHHHhhCceEEEEeccc---CHHHHHHHHHHH
Confidence 2279999999994 45789999999999 99999997543 4566666777799999998643 245689999999
Q ss_pred hCC---CCCCCCceEEEeecc---cHHHHHHHHcCCCeeEEEEeC
Q 025336 216 KNK---EFKLHQLLTHHVKLE---EIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 216 ~~~---~~~~~~~~~~~~~~~---~~~~a~~~~~~~~~~k~vi~~ 254 (254)
+++ ..+++++++++|+++ ++.++|+.+.++..+|+||++
T Consensus 295 ~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (341)
T cd08237 295 SRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEW 339 (341)
T ss_pred HhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEe
Confidence 999 335788899999985 566667666655457999864
No 48
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.98 E-value=4.5e-30 Score=213.08 Aligned_cols=244 Identities=27% Similarity=0.379 Sum_probs=205.4
Q ss_pred CCCCCcccccCCceeeeee----------------------------ccCcceeeEEecCC--ceEEcCCCCCccccccc
Q 025336 1 MLDGTSRMSVRGQKLYHIF----------------------------SCSTWSEYMVIDAN--YVVRVDPSIDLSHASFL 50 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~----------------------------~~g~~a~~~~v~~~--~v~~~p~~~~~~~aa~~ 50 (254)
+|+++.++++ ||+|+... ..|+|++|+.+++. .++++|+++++.+++.+
T Consensus 69 ~G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l 147 (345)
T cd08286 69 VGSAVTNFKV-GDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVML 147 (345)
T ss_pred eccCccccCC-CCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhc
Confidence 3667778899 99997532 12889999999987 89999999999999999
Q ss_pred cchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHH
Q 025336 51 SCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSIS 130 (254)
Q Consensus 51 ~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 130 (254)
+..++|||.++....++.++++|||+|+|++|++++|+++.+|+.+|+++++++++.+.++++|++.++++++ .++.
T Consensus 148 ~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~ 224 (345)
T cd08286 148 SDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK---GDAI 224 (345)
T ss_pred cchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc---ccHH
Confidence 9999999998777888999999999988999999999999999438999988889999999999999999886 6777
Q ss_pred HHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHH
Q 025336 131 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPI 210 (254)
Q Consensus 131 ~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 210 (254)
..+.++..+.++|+++||++....+..+++.++++ |+++.+|.... ..++++..++.+++++.+.... ...++.
T Consensus 225 ~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 298 (345)
T cd08286 225 EQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK-PVDLHLEKLWIKNITITTGLVD----TNTTPM 298 (345)
T ss_pred HHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC-CCCcCHHHHhhcCcEEEeecCc----hhhHHH
Confidence 77888777778999999999776889999999999 99999987543 3555666656689999875422 245888
Q ss_pred HHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCC---CeeEEEEeC
Q 025336 211 LLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP---DCVKVLITI 254 (254)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~k~vi~~ 254 (254)
++++++++.++..+++++++++++++++|+.+.+. +..|++|++
T Consensus 299 ~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 299 LLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred HHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 99999999977666677899999999999999876 346999975
No 49
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.98 E-value=2.7e-30 Score=213.38 Aligned_cols=235 Identities=22% Similarity=0.336 Sum_probs=199.0
Q ss_pred CCCCcccccCCceeee----------------------------eeccCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 2 LDGTSRMSVRGQKLYH----------------------------IFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~----------------------------~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
|+++..|++ ||+|+. +...|+|++|+.+++..++++|+++++++++.++++
T Consensus 70 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~ 148 (333)
T cd08296 70 GEGVSRWKV-GDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCA 148 (333)
T ss_pred CCCCccCCC-CCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhh
Confidence 566677888 999974 222489999999999999999999999999999999
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
+.|||+++. ..+++++++|||+|+|++|++++++|+.+|+ +|+++++++++.++++++|+++++++.+ .++...+
T Consensus 149 ~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~ 223 (333)
T cd08296 149 GVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK---EDVAEAL 223 (333)
T ss_pred hHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC---ccHHHHH
Confidence 999999984 4589999999999999999999999999999 8999999999999999999999998876 6677767
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHH
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLD 213 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 213 (254)
.+. .++|+++|+.|....+..++++++++ |+++.+|.... ..+++...++.+++++.+...+ ...++..+++
T Consensus 224 ~~~---~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~ 295 (333)
T cd08296 224 QEL---GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE-PVAVSPLQLIMGRKSIHGWPSG---TALDSEDTLK 295 (333)
T ss_pred Hhc---CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC-CCCcCHHHHhhcccEEEEeCcC---CHHHHHHHHH
Confidence 665 27999999997666889999999999 99999998654 4556666667799999998633 2456888889
Q ss_pred HHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEe
Q 025336 214 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
+++++++ ++.+ +.|+++++.+||+.+.+++. +|+||+
T Consensus 296 ~~~~~~l--~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 296 FSALHGV--RPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHhCCC--CceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 9988874 4445 57999999999999988877 698874
No 50
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.98 E-value=3.7e-30 Score=213.15 Aligned_cols=238 Identities=22% Similarity=0.330 Sum_probs=200.7
Q ss_pred CCCCcccccCCceeeeee---------------------------ccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLYHIF---------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|+++..|++ ||+|.++. ..|+|++|+.++++.++++|+++++++++.++..+
T Consensus 73 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~ 151 (340)
T cd05284 73 GSGVDGLKE-GDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAG 151 (340)
T ss_pred CCCCCcCcC-CCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchH
Confidence 667778999 99998642 24899999999999999999999999999999999
Q ss_pred hhhhHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHH
Q 025336 55 TTGFGAAWKE-AEVEKGSSVAVLGLGTVGLGAVDGARMQG-AAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISEL 132 (254)
Q Consensus 55 ~ta~~~l~~~-~~~~~~~~vlI~G~g~~G~~~~~~a~~~g-~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 132 (254)
+|||+++... ..+.++++|||+|+|++|++++|+|+..| . +|+++++++++.+.++++|+++++++++ . +...
T Consensus 152 ~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-~~~~ 226 (340)
T cd05284 152 LTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD---D-VVEE 226 (340)
T ss_pred HHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc---c-HHHH
Confidence 9999998665 46888999999999889999999999999 6 8999989999999999999999998886 5 7788
Q ss_pred HHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHH
Q 025336 133 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 212 (254)
Q Consensus 133 i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 212 (254)
++++.++.++|+++|++|++..+..++++++++ |+++.+|.... .+++...++.+++++.+.... ....+.+++
T Consensus 227 i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 300 (340)
T cd05284 227 VRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWG---TRAELVEVV 300 (340)
T ss_pred HHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC--CccCHHHhhhcceEEEEEecc---cHHHHHHHH
Confidence 888877778999999999766789999999999 99999987643 344444444589999887643 245688899
Q ss_pred HHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 213 DKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
++++++.+++ . .+.|+++++++|++.+.+++. +|+++.+
T Consensus 301 ~~l~~g~l~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 301 ALAESGKVKV--E-ITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred HHHHhCCCCc--c-eEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 9999998653 3 457999999999999988776 5888764
No 51
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.98 E-value=2.5e-30 Score=218.06 Aligned_cols=244 Identities=17% Similarity=0.221 Sum_probs=200.4
Q ss_pred CCCCCcccccCCceeeeee----------------------------ccCcceeeEEecCCceEEcCCCCCccccccccc
Q 025336 1 MLDGTSRMSVRGQKLYHIF----------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSC 52 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~----------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~ 52 (254)
+|+++..+++ ||+|+... ..|+|++|+++|+..++++|+++++++++.+++
T Consensus 96 vG~~v~~~~~-Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~ 174 (393)
T cd08246 96 VGEGVKNWKV-GDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYML 174 (393)
T ss_pred eCCCCCcCCC-CCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhhcc
Confidence 3677778899 99998653 238999999999999999999999999999999
Q ss_pred hhhhhhHHHHHh--cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCC----
Q 025336 53 GFTTGFGAAWKE--AEVEKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEP---- 125 (254)
Q Consensus 53 ~~~ta~~~l~~~--~~~~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~---- 125 (254)
++.|||+++... .+++++++|+|+|+ |++|++++++++.+|+ ++++++.++++.+.++++|+++++++++.+
T Consensus 175 ~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~ 253 (393)
T cd08246 175 VGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGV 253 (393)
T ss_pred cHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEcccccccccc
Confidence 999999998544 67899999999997 9999999999999999 788888999999999999999999875410
Q ss_pred ---------------CchHHHHHHHhhCCC-CccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHh
Q 025336 126 ---------------NKSISELVKGITHGM-GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALAC 189 (254)
Q Consensus 126 ---------------~~~~~~~i~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 189 (254)
...+.+.+.+++++. ++|+++||+|+. .+..++++++++ |+++.+|.......+++...+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~l~~ 331 (393)
T cd08246 254 LPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRG-GMVVICAGTTGYNHTYDNRYLWM 331 (393)
T ss_pred cccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccC-CEEEEEcccCCCCCCCcHHHHhh
Confidence 012566778888877 899999999985 789999999999 99999987544223445555666
Q ss_pred CCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCC-Ce-eEEEEe
Q 025336 190 GGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP-DC-VKVLIT 253 (254)
Q Consensus 190 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~-~k~vi~ 253 (254)
++.++.++.... .+.+.+++++++++.+. +.++++|++++++++|+.+.++ .. +|+++-
T Consensus 332 ~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 332 RQKRIQGSHFAN---DREAAEANRLVMKGRID--PCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred heeEEEecccCc---HHHHHHHHHHHHcCCce--eeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 888888876442 34688899999999854 4467889999999999999887 55 588763
No 52
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.97 E-value=4.8e-30 Score=214.54 Aligned_cols=227 Identities=29% Similarity=0.457 Sum_probs=192.8
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
.|+|++|+.+++..++++|+++++.+++.++.+++|||+++.....+.++++|||+|+|++|++++++|+..|+.+++++
T Consensus 139 ~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~ 218 (367)
T cd08263 139 MGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAV 218 (367)
T ss_pred CCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEE
Confidence 48999999999999999999999999999999999999998777888999999999889999999999999999448888
Q ss_pred cCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-ce
Q 025336 101 DKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-TM 179 (254)
Q Consensus 101 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~ 179 (254)
+.++++.++++++|++.++++++ .++...+.+..++.++|+++|++++...+..++++++++ |+++.+|.... ..
T Consensus 219 ~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~ 294 (367)
T cd08263 219 DVRDEKLAKAKELGATHTVNAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGAT 294 (367)
T ss_pred eCCHHHHHHHHHhCCceEecCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCc
Confidence 88999999999999999999887 778888888877778999999999865678999999999 99999987643 23
Q ss_pred eeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEe
Q 025336 180 VPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 180 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
..++...++.++.++.++... ...+.++.++++++++.++..+.+++.++++++.++++.++++.. +|+||+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 295 AEIPITRLVRRGIKIIGSYGA--RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred cccCHHHHhhCCeEEEecCCC--CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 445555665688888875322 113568889999999997765556788999999999999988876 588874
No 53
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.97 E-value=1.9e-29 Score=212.06 Aligned_cols=226 Identities=29% Similarity=0.421 Sum_probs=189.6
Q ss_pred cCcceeeEEecCC--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEE
Q 025336 21 CSTWSEYMVIDAN--YVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKII 98 (254)
Q Consensus 21 ~g~~a~~~~v~~~--~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~ 98 (254)
.|+|++|++++++ .++++|++++++++++++.+++|||+++ ...+++++++|||+|+|++|++++++|+..|..+|+
T Consensus 135 ~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi 213 (386)
T cd08283 135 AGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVI 213 (386)
T ss_pred CCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEE
Confidence 4899999999987 8999999999999999999999999998 788999999999998899999999999999985699
Q ss_pred EEcCCcccHHHHHhcCCceEeCCCCCCCc-hHHHHHHHhhCCCCccEEEEcCCCh---------------------hHHH
Q 025336 99 GIDKNPWKKEKGEAFGMTDFINPDDEPNK-SISELVKGITHGMGVDYCFECTGVP---------------------SLLS 156 (254)
Q Consensus 99 ~v~~~~~~~~~~~~~g~~~v~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~~---------------------~~~~ 156 (254)
+++.++++.+.+++++...++++.+ . ++.+.+.+++.++++|++|||+|+. ..+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (386)
T cd08283 214 AIDRVPERLEMARSHLGAETINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALR 290 (386)
T ss_pred EEcCCHHHHHHHHHcCCcEEEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHH
Confidence 9999999999999985446777765 5 4788888888777899999999752 3678
Q ss_pred HHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHH
Q 025336 157 EALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEID 236 (254)
Q Consensus 157 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (254)
.++++++++ |+++.+|........++...++.+++++.+.... ..+.+.+++++++++++...+++++.+++++++
T Consensus 291 ~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~ 366 (386)
T cd08283 291 EAIQAVRKG-GTVSIIGVYGGTVNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAP 366 (386)
T ss_pred HHHHHhccC-CEEEEEcCCCCCcCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHH
Confidence 899999999 9999998765422344554556689998887532 245688999999999977665677889999999
Q ss_pred HHHHHHcCCC-e-eEEEEeC
Q 025336 237 KAIQLLKQPD-C-VKVLITI 254 (254)
Q Consensus 237 ~a~~~~~~~~-~-~k~vi~~ 254 (254)
+||+.+.++. . +|++|++
T Consensus 367 ~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 367 EAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred HHHHHHHhCCCCeEEEEecC
Confidence 9999988776 3 6999864
No 54
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.97 E-value=2.8e-29 Score=207.72 Aligned_cols=240 Identities=27% Similarity=0.480 Sum_probs=201.2
Q ss_pred CCCCcccccCCceeee---------------------------eeccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLYH---------------------------IFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~---------------------------~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|+++..|++ ||+|+. +...|+|++|+.++++ ++++|+++++++++++ .++
T Consensus 69 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~ 145 (337)
T cd08261 69 GEGVAGLKV-GDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPL 145 (337)
T ss_pred CCCCCCCCC-CCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chH
Confidence 566777899 999986 2235899999999999 9999999999999877 677
Q ss_pred hhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHH
Q 025336 55 TTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVK 134 (254)
Q Consensus 55 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~ 134 (254)
+++++++ ....++++++|||+|+|.+|++++|+|+.+|+ +|+++.+++++.++++++|+++++++++ .++.+.+.
T Consensus 146 ~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~ 220 (337)
T cd08261 146 AIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD---EDVAARLR 220 (337)
T ss_pred HHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc---cCHHHHHH
Confidence 8888887 78899999999999889999999999999999 8999989999999999999999999887 77888888
Q ss_pred HhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHH
Q 025336 135 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDK 214 (254)
Q Consensus 135 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 214 (254)
+..++.++|+++||+|+...+..++++++++ |+++.+|.... ...++...+..+++++.+.. ....+.+++++++
T Consensus 221 ~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 295 (337)
T cd08261 221 ELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKG-PVTFPDPEFHKKELTILGSR---NATREDFPDVIDL 295 (337)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCC-CCccCHHHHHhCCCEEEEec---cCChhhHHHHHHH
Confidence 8877778999999998866789999999999 99999986643 33444455566788887763 2234578899999
Q ss_pred HhCCCCCCCCceEEEeecccHHHHHHHHcCCC-e-eEEEEeC
Q 025336 215 CKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD-C-VKVLITI 254 (254)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~k~vi~~ 254 (254)
++++.+++.+.+...+++++++++++.+.+++ . .|+|+++
T Consensus 296 ~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 296 LESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 99999765435677899999999999998873 4 6999874
No 55
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.97 E-value=2.5e-29 Score=208.54 Aligned_cols=243 Identities=27% Similarity=0.374 Sum_probs=201.2
Q ss_pred CCCCCcccccCCceeeeee-------------------------------ccCcceeeEEecCC--ceEEcCCCCCcccc
Q 025336 1 MLDGTSRMSVRGQKLYHIF-------------------------------SCSTWSEYMVIDAN--YVVRVDPSIDLSHA 47 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~-------------------------------~~g~~a~~~~v~~~--~v~~~p~~~~~~~a 47 (254)
+|+++..+++ ||+|++.. ..|+|++|+++++. .++++|++++++++
T Consensus 68 vG~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a 146 (344)
T cd08284 68 VGPEVRTLKV-GDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAA 146 (344)
T ss_pred eCCCccccCC-CCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHh
Confidence 3677788999 99998642 14889999999965 99999999999999
Q ss_pred ccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCc
Q 025336 48 SFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNK 127 (254)
Q Consensus 48 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~ 127 (254)
+.++.+++|||+++. ...+.++++|||+|+|++|++++|+|+.+|+.++++++.++++.+.++++|+. .++.+. .
T Consensus 147 ~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~---~ 221 (344)
T cd08284 147 LLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFED---A 221 (344)
T ss_pred hhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCC---c
Confidence 999999999999984 57889999999998899999999999999975788888888899999999975 466665 6
Q ss_pred hHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCC
Q 025336 128 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSD 207 (254)
Q Consensus 128 ~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 207 (254)
++...+.++.++.++|+++||+++...+...+++++++ |+++.+|..............+.+++++.+.. ....+.
T Consensus 222 ~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 297 (344)
T cd08284 222 EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR---CPVRSL 297 (344)
T ss_pred CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEec---CCcchh
Confidence 67788888887778999999999766889999999999 99999997764233444455556888887542 223567
Q ss_pred HHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEe
Q 025336 208 LPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 253 (254)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 253 (254)
++++++++.++.+++.+++.+.+++++++++|+.+.+++.+|+|++
T Consensus 298 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 298 FPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred HHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 9999999999997765556778999999999998887655788886
No 56
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.97 E-value=1.2e-29 Score=208.51 Aligned_cols=244 Identities=21% Similarity=0.271 Sum_probs=205.2
Q ss_pred CCCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-C
Q 025336 1 MLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-G 79 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 79 (254)
.|+++.++++ ||+|++....|+|++|+.++...++++|+++++.+++.++..+++||+++.....+.++++|||+|+ |
T Consensus 71 ~G~~v~~~~~-Gd~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~ 149 (323)
T cd05282 71 VGSGVSGLLV-GQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANS 149 (323)
T ss_pred eCCCCCCCCC-CCEEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEccccc
Confidence 3677888999 9999987535899999999999999999999999999999999999999877788899999999987 8
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHH
Q 025336 80 TVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 159 (254)
Q Consensus 80 ~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~ 159 (254)
.+|++++++|+.+|+ +++++..++++.+.++++|++.++++++ .++...+.+.+++.++|.++||+|+. .....+
T Consensus 150 ~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~ 224 (323)
T cd05282 150 AVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVKEATGGAGARLALDAVGGE-SATRLA 224 (323)
T ss_pred HHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHHHHhcCCCceEEEECCCCH-HHHHHH
Confidence 999999999999999 8999989999999999999999998876 67888888888877999999999987 567889
Q ss_pred HHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCC-------CCCHHHHHHHHhCCCCCCCCceEEEeec
Q 025336 160 ETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPILLDKCKNKEFKLHQLLTHHVKL 232 (254)
Q Consensus 160 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (254)
++++++ |+++.+|........++...+..++.++.+.....+.. .+.+.++++++.++++. +..++.+++
T Consensus 225 ~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~ 301 (323)
T cd05282 225 RSLRPG-GTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLT--TPVGAKFPL 301 (323)
T ss_pred HhhCCC-CEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcc--cCccceecH
Confidence 999999 99999987654323455555555899999887554321 13477788899999855 345678999
Q ss_pred ccHHHHHHHHcCCCe-eEEEEe
Q 025336 233 EEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 233 ~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
++++++|+.+.+++. .|++++
T Consensus 302 ~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 302 EDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHHHhcCCCCceEeeC
Confidence 999999999987766 488764
No 57
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.97 E-value=2.2e-29 Score=207.12 Aligned_cols=243 Identities=19% Similarity=0.185 Sum_probs=202.6
Q ss_pred CCCCcccccCCceeeeeec--cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-
Q 025336 2 LDGTSRMSVRGQKLYHIFS--CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL- 78 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~--~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~- 78 (254)
|+++..+++ ||+|++..+ .|+|++|+.+++..++++|+++++++++.++++++||| ++....+++++++|+|+|+
T Consensus 75 G~~v~~~~~-Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~ 152 (324)
T cd08244 75 GPGVDPAWL-GRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAA 152 (324)
T ss_pred CCCCCCCCC-CCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCC
Confidence 566677888 999998752 58999999999999999999999999999999999995 4557788999999999985
Q ss_pred CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHH
Q 025336 79 GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEA 158 (254)
Q Consensus 79 g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~ 158 (254)
|++|++++++|+.+|+ +|+++++++++.+.++++|++.++++++ .++.+.+.+..+++++|+++||+|+. ....+
T Consensus 153 ~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~ 227 (324)
T cd08244 153 GGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTR---PDWPDQVREALGGGGVTVVLDGVGGA-IGRAA 227 (324)
T ss_pred chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHcCCCCceEEEECCChH-hHHHH
Confidence 9999999999999999 8999999999999999999988888876 77888888877777899999999987 56899
Q ss_pred HHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCC---CCCHHHHHHHHhCCCCCCCCceEEEeecccH
Q 025336 159 LETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPILLDKCKNKEFKLHQLLTHHVKLEEI 235 (254)
Q Consensus 159 ~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (254)
+++++++ |+++.+|.......++++..++.+++++.+........ .+.+.++++++.++++. +.+++.++++++
T Consensus 228 ~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~ 304 (324)
T cd08244 228 LALLAPG-GRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLV--PVVGQTFPLERA 304 (324)
T ss_pred HHHhccC-cEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCcc--CccceEEeHHHH
Confidence 9999999 99999987654223555445556899998876543211 23466788889999854 446678999999
Q ss_pred HHHHHHHcCCCe-eEEEEeC
Q 025336 236 DKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 236 ~~a~~~~~~~~~-~k~vi~~ 254 (254)
++||+.+.++.. +|+++++
T Consensus 305 ~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 305 AEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHHHHHcCCCCceEEEeC
Confidence 999999988766 5998864
No 58
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.97 E-value=2.8e-29 Score=208.32 Aligned_cols=243 Identities=23% Similarity=0.355 Sum_probs=204.2
Q ss_pred CCCCcccccCCceeee---------------------------eeccCcceeeEEecCC--ceEEcCCCCCccccccccc
Q 025336 2 LDGTSRMSVRGQKLYH---------------------------IFSCSTWSEYMVIDAN--YVVRVDPSIDLSHASFLSC 52 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~---------------------------~~~~g~~a~~~~v~~~--~v~~~p~~~~~~~aa~~~~ 52 (254)
|+++..|++ ||+|++ +.+.|+|++|+.+++. .++++|+++++++++.++.
T Consensus 70 G~~~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~ 148 (345)
T cd08260 70 GEDVSRWRV-GDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGC 148 (345)
T ss_pred CCCCccCCC-CCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhcc
Confidence 567778899 999975 3335899999999985 8999999999999999999
Q ss_pred hhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHH
Q 025336 53 GFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISEL 132 (254)
Q Consensus 53 ~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 132 (254)
+++|||+++....++.++++|+|+|+|++|++++|+|+..|+ +|+++++++++.+.++++|++.+++++. ..++...
T Consensus 149 ~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~ 225 (345)
T cd08260 149 RFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE--VEDVAAA 225 (345)
T ss_pred chHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc--chhHHHH
Confidence 999999998778889999999999999999999999999999 8999999999999999999999988763 1356677
Q ss_pred HHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-ce-eeccHHHHHhCCCEEEeeecCCCCCCCCHHH
Q 025336 133 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-TM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPI 210 (254)
Q Consensus 133 i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 210 (254)
+.++..+ ++|.+|||+|+...+...+++++++ |+++.+|.... .. ..+++..+..+++++.+.... ..+.++.
T Consensus 226 ~~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 300 (345)
T cd08260 226 VRDLTGG-GAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM---PAHRYDA 300 (345)
T ss_pred HHHHhCC-CCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC---CHHHHHH
Confidence 7777777 8999999999755788999999999 99999997654 21 455665665688999887532 2467889
Q ss_pred HHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEe
Q 025336 211 LLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
++++++++++...+.+.+.+++++++++|+.+.++.. +|+|++
T Consensus 301 ~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 301 MLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred HHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 9999999997765556778999999999999988766 588875
No 59
>PRK10083 putative oxidoreductase; Provisional
Probab=99.97 E-value=2.9e-29 Score=207.74 Aligned_cols=239 Identities=18% Similarity=0.284 Sum_probs=193.4
Q ss_pred CCCCcccccCCceee---------------------------eeeccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLY---------------------------HIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~---------------------------~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|+++..+++ ||+|+ ++...|+|+||++++...++++|+++++++++ +..++
T Consensus 69 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~ 146 (339)
T PRK10083 69 GEGVDAARI-GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPF 146 (339)
T ss_pred CCCCccCCC-CCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchH
Confidence 667778899 99997 33335899999999999999999999998876 45778
Q ss_pred hhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 55 TTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARM-QGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 55 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~-~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
.+++.+ ....++++|++|+|+|+|++|++++|+++. +|+..++++++++++.+.++++|++.++++++ .++.+.+
T Consensus 147 ~~a~~~-~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~~ 222 (339)
T PRK10083 147 TIAANV-TGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ---EPLGEAL 222 (339)
T ss_pred HHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHH
Confidence 888864 477899999999999999999999999996 69966888888999999999999999998876 6666666
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHH
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLD 213 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 213 (254)
.. .+.++|++||++|++..+..++++++++ |+++.+|.... ...++...+..+++++.+... ..+.++++++
T Consensus 223 ~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 294 (339)
T PRK10083 223 EE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE-PSEIVQQGITGKELSIFSSRL----NANKFPVVID 294 (339)
T ss_pred hc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CceecHHHHhhcceEEEEEec----ChhhHHHHHH
Confidence 43 2335789999999766789999999999 99999997654 233344455557888877653 2467899999
Q ss_pred HHhCCCCCCCCceEEEeecccHHHHHHHHcCCC-e-eEEEEeC
Q 025336 214 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD-C-VKVLITI 254 (254)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~k~vi~~ 254 (254)
+++++++++.+++++.|+++++++|++.+.++. . +|+++++
T Consensus 295 ~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 295 WLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred HHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence 999999776555778999999999999987543 3 6999863
No 60
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.97 E-value=2.2e-29 Score=209.07 Aligned_cols=244 Identities=30% Similarity=0.398 Sum_probs=199.4
Q ss_pred CCCCcccccCCceeeee------------------------------eccCcceeeEEecCC--ceEEcCCCCCcccccc
Q 025336 2 LDGTSRMSVRGQKLYHI------------------------------FSCSTWSEYMVIDAN--YVVRVDPSIDLSHASF 49 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~------------------------------~~~g~~a~~~~v~~~--~v~~~p~~~~~~~aa~ 49 (254)
|+++..|++ ||+|+.. ...|+|++|++++++ .++++|+++++++++.
T Consensus 70 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~ 148 (347)
T cd05278 70 GSDVKRLKP-GDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALM 148 (347)
T ss_pred CCCccccCC-CCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhh
Confidence 677788999 9999851 224899999999987 8999999999999999
Q ss_pred ccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchH
Q 025336 50 LSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSI 129 (254)
Q Consensus 50 ~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 129 (254)
++.+++|||+++ ...+++++++|||.|+|++|++++|+|+.+|..+++++++++++.+.++++|++.++++++ .++
T Consensus 149 l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~ 224 (347)
T cd05278 149 LSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN---GDI 224 (347)
T ss_pred hcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc---chH
Confidence 999999999998 6788999999999888999999999999999647888888888899999999999998887 778
Q ss_pred HHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHH
Q 025336 130 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLP 209 (254)
Q Consensus 130 ~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 209 (254)
.+.+++.+++.++|+++|++++...+...+++++++ |+++.+|..............+.+++++.+.... ..+.++
T Consensus 225 ~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 300 (347)
T cd05278 225 VEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVP---VRARMP 300 (347)
T ss_pred HHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccC---chhHHH
Confidence 888888777678999999999855789999999999 9999998654411111111223477777775432 245788
Q ss_pred HHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe--eEEEEeC
Q 025336 210 ILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC--VKVLITI 254 (254)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~k~vi~~ 254 (254)
+++++++++.+++.+.+...+++++++++++.+..+.. .|+++++
T Consensus 301 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 301 ELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred HHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 99999999997755445678999999999999877665 4888864
No 61
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.97 E-value=5e-29 Score=206.67 Aligned_cols=242 Identities=24% Similarity=0.394 Sum_probs=201.8
Q ss_pred CCCCcccccCCceeeeee---------------------------ccCcceeeEEecCCc-----eEEcCCCCCcccccc
Q 025336 2 LDGTSRMSVRGQKLYHIF---------------------------SCSTWSEYMVIDANY-----VVRVDPSIDLSHASF 49 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---------------------------~~g~~a~~~~v~~~~-----v~~~p~~~~~~~aa~ 49 (254)
|+++..|++ ||+|+++. ..|+|++|+.++++. ++++|+++++.+++.
T Consensus 69 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~ 147 (343)
T cd08235 69 GDGVTGFKV-GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAAL 147 (343)
T ss_pred CCCCCCCCC-CCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHh
Confidence 567778999 99998751 248999999999988 999999999999887
Q ss_pred ccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchH
Q 025336 50 LSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSI 129 (254)
Q Consensus 50 ~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 129 (254)
+ .++.+|++++. ...++++++|||+|+|.+|++++|+|+..|.+.++++++++++.+.++++|.++++++++ .++
T Consensus 148 ~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~ 222 (343)
T cd08235 148 V-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE---EDL 222 (343)
T ss_pred h-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc---cCH
Confidence 6 78899999984 558999999999988999999999999999933888889999999999999999999887 788
Q ss_pred HHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-ceeeccHHHHHhCCCEEEeeecCCCCCCCCH
Q 025336 130 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-TMVPLNVIALACGGRTLKGTTFGGIKTKSDL 208 (254)
Q Consensus 130 ~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 208 (254)
.+.+.+..+++++|+++||+++...+...+++++++ |+++.+|.... ....+++..+..+++.+.+.... ..+.+
T Consensus 223 ~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~ 298 (343)
T cd08235 223 VEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA---SPEDY 298 (343)
T ss_pred HHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC---ChhhH
Confidence 888888887778999999999766788999999999 99999986544 23445555666688888776533 24568
Q ss_pred HHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEe
Q 025336 209 PILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 253 (254)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 253 (254)
+.++++++++.+.+.+.+...+++++++++++.+.+++..|+|++
T Consensus 299 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 343 (343)
T cd08235 299 KEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVIT 343 (343)
T ss_pred HHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence 889999999997654456678999999999999988774488874
No 62
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=3.5e-29 Score=207.56 Aligned_cols=240 Identities=24% Similarity=0.395 Sum_probs=198.9
Q ss_pred CCCCcccccCCceeee------------------------ee----ccCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 2 LDGTSRMSVRGQKLYH------------------------IF----SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~------------------------~~----~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
|.++.+|++ ||+|+. +. ..|+|++|++++++.++++|+++++++++.+ .+
T Consensus 70 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~ 147 (343)
T cd05285 70 GSGVTHLKV-GDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EP 147 (343)
T ss_pred CCCCCCCCC-CCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hH
Confidence 566778899 999975 21 1489999999999999999999999999877 67
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchH---H
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSI---S 130 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~ 130 (254)
+.+|++++ ....++++++|||+|+|++|++++|+|+.+|...|+++++++++.++++++|++.++++++ .++ .
T Consensus 148 ~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~~ 223 (343)
T cd05285 148 LSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT---EDTPESA 223 (343)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc---ccchhHH
Confidence 88999987 7899999999999988999999999999999944899988999999999999999998876 553 6
Q ss_pred HHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHH
Q 025336 131 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPI 210 (254)
Q Consensus 131 ~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 210 (254)
+.+.+.+++.++|+++||+|+...+...+++++++ |+++.+|.... ...+++..+..+++.+.+.... .+.+++
T Consensus 224 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 297 (343)
T cd05285 224 EKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKP-EVTLPLSAASLREIDIRGVFRY----ANTYPT 297 (343)
T ss_pred HHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CCccCHHHHhhCCcEEEEeccC----hHHHHH
Confidence 77777777778999999999865789999999999 99999986543 2344555566688888876532 256888
Q ss_pred HHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCC-e-eEEEEe
Q 025336 211 LLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD-C-VKVLIT 253 (254)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~k~vi~ 253 (254)
++++++++.+.+.+.+.+.|+++++.++++.+.++. . +|++|.
T Consensus 298 ~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 298 AIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred HHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEEe
Confidence 999999998765555677899999999999998774 3 799874
No 63
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.97 E-value=3.3e-29 Score=208.25 Aligned_cols=242 Identities=21% Similarity=0.285 Sum_probs=201.0
Q ss_pred CCCCCcccccCCceeeeee---------------------------ccCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 1 MLDGTSRMSVRGQKLYHIF---------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~---------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
+|+++..+++ ||+|+++. ..|+|++|+.++...++++|+++++.+++.+++.
T Consensus 81 vG~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~ 159 (350)
T cd08240 81 VGPDAADVKV-GDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACS 159 (350)
T ss_pred eCCCCCCCCC-CCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhch
Confidence 3667777889 99998651 3489999999999999999999999999999999
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
++|||+++.....++++++|||+|+|++|++++|+|+..|+++|++++.++++.+.++++|++.++++++ .++.+.+
T Consensus 160 ~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~ 236 (350)
T cd08240 160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSD---PDAAKRI 236 (350)
T ss_pred hhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCC---ccHHHHH
Confidence 9999999876666678999999988999999999999999977888888999999999999988888876 6777778
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHH
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLD 213 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 213 (254)
.+..++ ++|+++|++|.+..+..++++++++ |+++.+|.... ....+...+.+++.++.+..... .+++.++++
T Consensus 237 ~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~ 310 (350)
T cd08240 237 IKAAGG-GVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGG-EATLPLPLLPLRALTIQGSYVGS---LEELRELVA 310 (350)
T ss_pred HHHhCC-CCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCC-CCcccHHHHhhcCcEEEEcccCC---HHHHHHHHH
Confidence 777776 8999999999766889999999999 99999987654 12223333445888888876432 356888999
Q ss_pred HHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 214 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+++++.++. .....+++++++++|+.+.+++. +|+++++
T Consensus 311 ll~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 311 LAKAGKLKP--IPLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred HHHcCCCcc--ceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 999998653 35568999999999999987766 5988863
No 64
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.97 E-value=2.2e-29 Score=207.87 Aligned_cols=244 Identities=24% Similarity=0.282 Sum_probs=201.8
Q ss_pred CCCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-C
Q 025336 1 MLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-G 79 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 79 (254)
+|.++..+++ ||+|+++..+|+|++|++++...++++|+++++++++.++.++.+||+++.....++++++|+|+|+ |
T Consensus 73 vG~~v~~~~~-Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g 151 (334)
T PTZ00354 73 VGSDVKRFKE-GDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGAS 151 (334)
T ss_pred eCCCCCCCCC-CCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence 3667778899 9999988656999999999999999999999999999999999999999877788999999999986 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCch-HHHHHHHhhCCCCccEEEEcCCChhHHHHH
Q 025336 80 TVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKS-ISELVKGITHGMGVDYCFECTGVPSLLSEA 158 (254)
Q Consensus 80 ~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~ 158 (254)
++|++++++++.+|+ +++++.+++++.++++++|+++++++.. .+ +...+.+.++++++|+++||+++. .+..+
T Consensus 152 ~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~ 226 (334)
T PTZ00354 152 GVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIRYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSET 226 (334)
T ss_pred hHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCC---hhHHHHHHHHHhCCCCceEEEECCchH-HHHHH
Confidence 999999999999999 7777889999999999999988888765 44 777788887777999999999875 78999
Q ss_pred HHHcccCCcEEEEEccCCCceee-ccHHHHHhCCCEEEeeecCCCCC-------CCCHHHHHHHHhCCCCCCCCceEEEe
Q 025336 159 LETTKVGKGKVIVIGVGVDTMVP-LNVIALACGGRTLKGTTFGGIKT-------KSDLPILLDKCKNKEFKLHQLLTHHV 230 (254)
Q Consensus 159 ~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (254)
+++++++ |+++.+|...+.... ++...+..++.++.++....... ...++.+++++.++.++ +.+.+.+
T Consensus 227 ~~~l~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~ 303 (334)
T PTZ00354 227 AEVLAVD-GKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIK--PIVDRTY 303 (334)
T ss_pred HHHhccC-CeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCcc--CccccEE
Confidence 9999999 999999865442222 56666666777888876543211 02246678888888854 4466789
Q ss_pred ecccHHHHHHHHcCCCe-eEEEEe
Q 025336 231 KLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 231 ~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
++++++++++.+.++.. +|++++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~kvvv~ 327 (334)
T PTZ00354 304 PLEEVAEAHTFLEQNKNIGKVVLT 327 (334)
T ss_pred cHHHHHHHHHHHHhCCCCceEEEe
Confidence 99999999999987765 588875
No 65
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=4.1e-29 Score=207.00 Aligned_cols=241 Identities=23% Similarity=0.397 Sum_probs=193.1
Q ss_pred CCCCcc-cccCCceeeeee-----------------ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHH
Q 025336 2 LDGTSR-MSVRGQKLYHIF-----------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWK 63 (254)
Q Consensus 2 g~~~~~-~~~~Gd~v~~~~-----------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~ 63 (254)
|+++.. |++ ||+|+++. ..|+|+||+++|++.++++|+++++++++ ++.++++||+++ .
T Consensus 79 G~~v~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~ 155 (341)
T cd08262 79 GPGTERKLKV-GTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-R 155 (341)
T ss_pred CCCCcCCCCC-CCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-H
Confidence 556665 899 99998762 35899999999999999999999999887 567889999985 7
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHH---HHHHhhCCC
Q 025336 64 EAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISE---LVKGITHGM 140 (254)
Q Consensus 64 ~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~---~i~~~~~~~ 140 (254)
..+++++++|||+|+|++|.+++|+++.+|+..++++++++++.+.++++|+++++++++ .+... .+.+...+.
T Consensus 156 ~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~ 232 (341)
T cd08262 156 RARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAA---DSPFAAWAAELARAGGP 232 (341)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCC---cCHHHHHHHHHHHhCCC
Confidence 889999999999988999999999999999955788888899999999999988998775 32221 344455556
Q ss_pred CccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCC
Q 025336 141 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEF 220 (254)
Q Consensus 141 ~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 220 (254)
++|+++|++|++..+..++++++++ |+++.+|.... .....+.....+++++.+.... ..+.+++++++++++.+
T Consensus 233 ~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i 307 (341)
T cd08262 233 KPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCME-SDNIEPALAIRKELTLQFSLGY---TPEEFADALDALAEGKV 307 (341)
T ss_pred CCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCC-CCccCHHHHhhcceEEEEEecc---cHHHHHHHHHHHHcCCC
Confidence 8999999999854678899999999 99999987643 1112222323477787765422 23568899999999998
Q ss_pred CCCCceEEEeecccHHHHHHHHcCCCe-eEEEEe
Q 025336 221 KLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 221 ~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
.+.+.+.+.+++++++++++.+.+++. +|+|++
T Consensus 308 ~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 308 DVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred ChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 766666789999999999999988776 598874
No 66
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.97 E-value=5.6e-29 Score=206.88 Aligned_cols=239 Identities=24% Similarity=0.384 Sum_probs=197.9
Q ss_pred CCCCc--ccccCCceeee---------------------------ee--ccCcceeeEEecCC-ceEEcCCCCCcccccc
Q 025336 2 LDGTS--RMSVRGQKLYH---------------------------IF--SCSTWSEYMVIDAN-YVVRVDPSIDLSHASF 49 (254)
Q Consensus 2 g~~~~--~~~~~Gd~v~~---------------------------~~--~~g~~a~~~~v~~~-~v~~~p~~~~~~~aa~ 49 (254)
|.++. +|++ ||+|+. +. ..|+|++|+.+|++ .++++|+++++++++.
T Consensus 78 G~~v~~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~ 156 (350)
T cd08256 78 GEGAEERGVKV-GDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL 156 (350)
T ss_pred CCCcccCCCCC-CCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence 55666 7888 999985 21 34899999999987 5789999999999998
Q ss_pred ccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchH
Q 025336 50 LSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSI 129 (254)
Q Consensus 50 ~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 129 (254)
+ .+++|+|.++ ...+++++++|+|.|+|++|++++++|+.+|+..++++++++++.+.++++|++.++++++ .++
T Consensus 157 ~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~ 231 (350)
T cd08256 157 I-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPE---VDV 231 (350)
T ss_pred h-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCC---cCH
Confidence 8 8999999998 7889999999999778999999999999999866888888999999999999999998876 778
Q ss_pred HHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHH-HhCCCEEEeeecCCCCCCCCH
Q 025336 130 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIAL-ACGGRTLKGTTFGGIKTKSDL 208 (254)
Q Consensus 130 ~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~ 208 (254)
.+.+.+.+++.++|+++|++|+...+..++++++++ |+++.+|.... ...++...+ ..+++++.++... ...+
T Consensus 232 ~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~----~~~~ 305 (350)
T cd08256 232 VEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGD-PVTVDWSIIGDRKELDVLGSHLG----PYCY 305 (350)
T ss_pred HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCC-CCccChhHhhcccccEEEEeccC----chhH
Confidence 888888888778999999999755788999999999 99999986543 223333332 2467788877643 2468
Q ss_pred HHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEE
Q 025336 209 PILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi 252 (254)
.+++++++++.++..+.+.+.|+++++++||+.+.+++. +|+++
T Consensus 306 ~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 306 PIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred HHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 889999999997765556788999999999999988765 58774
No 67
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.97 E-value=4.6e-29 Score=210.55 Aligned_cols=244 Identities=19% Similarity=0.231 Sum_probs=199.1
Q ss_pred CCCCcccccCCceeeeee----------------------------ccCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 2 LDGTSRMSVRGQKLYHIF----------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~----------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
|+++..+++ ||+|+... ..|+|+||+++++..++++|+++++++++.++.+
T Consensus 93 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~ 171 (398)
T TIGR01751 93 GPGVTRWKV-GDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLT 171 (398)
T ss_pred CCCCCCCCC-CCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhhccch
Confidence 667778889 99997642 2489999999999999999999999999999999
Q ss_pred hhhhhHHHHH--hcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCC-----
Q 025336 54 FTTGFGAAWK--EAEVEKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEP----- 125 (254)
Q Consensus 54 ~~ta~~~l~~--~~~~~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~----- 125 (254)
+.|||+++.. ..+++++++|+|+|+ |++|++++|+++.+|+ +++++++++++.+.++++|++.++++++.+
T Consensus 172 ~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~ 250 (398)
T TIGR01751 172 GATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRL 250 (398)
T ss_pred HHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhcc
Confidence 9999999754 467889999999997 9999999999999999 788888889999999999999999875410
Q ss_pred --------------CchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCC
Q 025336 126 --------------NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGG 191 (254)
Q Consensus 126 --------------~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 191 (254)
...+...+.++++++++|++|||+|.. .+..++++++++ |+++.+|........++...+..++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~ 328 (398)
T TIGR01751 251 PDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRG-GMVVICGGTTGYNHDYDNRYLWMRQ 328 (398)
T ss_pred ccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccC-CEEEEEccccCCCCCcCHHHHhhcc
Confidence 012445667777777899999999975 789999999999 9999999865433445555566678
Q ss_pred CEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 192 RTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 192 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
.++.++.... ..++++++++++++++. +.+++++++++++++|+.+.++.. +|+|+.+
T Consensus 329 ~~~~~~~~~~---~~~~~~~~~~l~~~~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 387 (398)
T TIGR01751 329 KRIQGSHFAN---LREAWEANRLVAKGRID--PTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLV 387 (398)
T ss_pred cEEEccccCc---HHHHHHHHHHHHCCCcc--cceeeEEcHHHHHHHHHHHHcCCCCceEEEEe
Confidence 8888776432 34478899999999855 446788999999999999987776 5888763
No 68
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.97 E-value=8.4e-29 Score=208.05 Aligned_cols=245 Identities=20% Similarity=0.337 Sum_probs=197.0
Q ss_pred CCCCcccccCCceeee---------------------------eeccCcceeeEEecCCceEEcCCCC-------Ccccc
Q 025336 2 LDGTSRMSVRGQKLYH---------------------------IFSCSTWSEYMVIDANYVVRVDPSI-------DLSHA 47 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~---------------------------~~~~g~~a~~~~v~~~~v~~~p~~~-------~~~~a 47 (254)
|+++..|++ ||+|+. +...|+|++|+.+++..++++|+.+ +++ +
T Consensus 103 G~~v~~~~~-Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~ 180 (384)
T cd08265 103 GKNVKNFEK-GDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-A 180 (384)
T ss_pred CCCCCCCCC-CCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-H
Confidence 666777889 999974 3235899999999999999999863 344 5
Q ss_pred ccccchhhhhhHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCC
Q 025336 48 SFLSCGFTTGFGAAWKE-AEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPN 126 (254)
Q Consensus 48 a~~~~~~~ta~~~l~~~-~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~ 126 (254)
++++.++++||+++... .++++|++|||+|+|++|++++|+|+.+|+.+|++++.++++.+.++++|+++++++++.+.
T Consensus 181 a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 260 (384)
T cd08265 181 GALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRD 260 (384)
T ss_pred hhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEccccccc
Confidence 56668899999998666 68999999999988999999999999999867999988888999999999999988774111
Q ss_pred chHHHHHHHhhCCCCccEEEEcCCCh-hHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCC
Q 025336 127 KSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTK 205 (254)
Q Consensus 127 ~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 205 (254)
.++...+.++++++++|+++|+.|++ ..+..++++++++ |+++.+|.... ..+++...+..+..++.+..... ..
T Consensus 261 ~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~--~~ 336 (384)
T cd08265 261 CLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGHS--GH 336 (384)
T ss_pred ccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC-CCcccHHHHhhCceEEEEeeccC--Cc
Confidence 36788888888888999999999963 3678999999999 99999986544 23344455555777888775321 23
Q ss_pred CCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEE
Q 025336 206 SDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 252 (254)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 252 (254)
..+.+++++++++.++...++++.|+++++++||+.+.++...|+|+
T Consensus 337 ~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 337 GIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred chHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 46899999999999776555778899999999999987765568875
No 69
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.97 E-value=1.2e-28 Score=204.24 Aligned_cols=240 Identities=25% Similarity=0.383 Sum_probs=203.1
Q ss_pred CCCCcccccCCceeeeee----------------------------ccCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 2 LDGTSRMSVRGQKLYHIF----------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~----------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
|+++..+++ ||+|+... ..|+|++|+.++++.++++|+++++++++.++..
T Consensus 72 G~~~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~ 150 (341)
T cd08297 72 GPGVSGLKV-GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCA 150 (341)
T ss_pred CCCCCCCCC-CCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcc
Confidence 566777889 99997531 2489999999999999999999999999999999
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHH
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISEL 132 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 132 (254)
+.|||+++.. .+++++++|||+|+ +.+|++++++++.+|+ +|+++..++++.+.++++|++.++++++ .++...
T Consensus 151 ~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~ 225 (341)
T cd08297 151 GVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK---SDDVEA 225 (341)
T ss_pred hHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC---ccHHHH
Confidence 9999999854 58999999999987 6799999999999999 8999999999999999999999999887 678888
Q ss_pred HHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHH
Q 025336 133 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 212 (254)
Q Consensus 133 i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 212 (254)
+.+..+++++|+++|+.+....+..++++++++ |+++.+|.......+++...++.+++++.+.... ..+.++.++
T Consensus 226 ~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 301 (341)
T cd08297 226 VKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVG---TRQDLQEAL 301 (341)
T ss_pred HHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCCCCCCCCHHHHHhcccEEEEeccC---CHHHHHHHH
Confidence 888887779999999887666889999999999 9999998765433456666666789999886532 246788999
Q ss_pred HHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 213 DKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+++++++++ +.+ ..|++++++++|+.+.++.. +|+++++
T Consensus 302 ~~~~~~~l~--~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 302 EFAARGKVK--PHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred HHHHcCCCc--cee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 999999864 334 57999999999999988776 5999875
No 70
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=6.4e-29 Score=206.54 Aligned_cols=237 Identities=23% Similarity=0.340 Sum_probs=194.9
Q ss_pred CCCCcccccCCceeeee----------------ec---cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHH
Q 025336 2 LDGTSRMSVRGQKLYHI----------------FS---CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAW 62 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~----------------~~---~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~ 62 (254)
|+++.+|++ ||+|+.. .+ +|+|++|+.+|+..++++|+++++++++.+++++.|||+++
T Consensus 93 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~- 170 (350)
T cd08274 93 GEGVDTARI-GERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML- 170 (350)
T ss_pred CCCCCCCCC-CCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-
Confidence 667778999 9999863 11 38999999999999999999999999999999999999987
Q ss_pred HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCC
Q 025336 63 KEAEVEKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
...+++++++|||+|+ |++|++++++++.+|+ ++++++.+. +.+.++++|++.+++... ....+ .+.+.+++
T Consensus 171 ~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~ 243 (350)
T cd08274 171 ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEP 243 (350)
T ss_pred hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCC
Confidence 7788999999999997 9999999999999999 788886654 888889999876665443 33333 45556668
Q ss_pred ccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCC
Q 025336 142 VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFK 221 (254)
Q Consensus 142 ~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (254)
+|++||++|+. .+..++++++++ |+++.+|.......+++...++.++.++.++... ....+.++++++.+++++
T Consensus 244 ~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~ 318 (350)
T cd08274 244 VDVVADVVGGP-LFPDLLRLLRPG-GRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLG---TREVFRRLVRYIEEGEIR 318 (350)
T ss_pred CcEEEecCCHH-HHHHHHHHhccC-CEEEEecccCCccccCCHHHhhhcceEEEEeecC---CHHHHHHHHHHHHCCCcc
Confidence 99999999986 789999999999 9999998654322566667766789999988743 245688899999999854
Q ss_pred CCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 222 LHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 222 ~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+.+.+.+++++++++|+.+.++.. .|+|+++
T Consensus 319 --~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 319 --PVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred --cccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 446678999999999999987665 5998864
No 71
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=2.1e-28 Score=203.12 Aligned_cols=244 Identities=26% Similarity=0.351 Sum_probs=198.9
Q ss_pred CCCCCcccccCCceeee-ee--------------------------ccCcceeeEEecCC--ceEEcCCCCCccccc---
Q 025336 1 MLDGTSRMSVRGQKLYH-IF--------------------------SCSTWSEYMVIDAN--YVVRVDPSIDLSHAS--- 48 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~-~~--------------------------~~g~~a~~~~v~~~--~v~~~p~~~~~~~aa--- 48 (254)
+|+++..+++ ||+|+. +. .+|+|++|+.+|.+ .++++|++++++.+.
T Consensus 68 vG~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~ 146 (345)
T cd08287 68 VGSEVTSVKP-GDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPS 146 (345)
T ss_pred eCCCCCccCC-CCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhh
Confidence 3667778899 999975 21 12889999999975 899999999873221
Q ss_pred --cccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCC
Q 025336 49 --FLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPN 126 (254)
Q Consensus 49 --~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~ 126 (254)
.+...+.+|++++ ....++++++|+|.|+|++|++++|+|+..|+..++++++++++.+.++++|++.++++++
T Consensus 147 ~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--- 222 (345)
T cd08287 147 LLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--- 222 (345)
T ss_pred hHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc---
Confidence 1225688899987 4778999999999988999999999999999955888888888899999999999999987
Q ss_pred chHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCC
Q 025336 127 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKS 206 (254)
Q Consensus 127 ~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 206 (254)
.++.+.+.+..++.++|+++||+|++..+..++++++++ |+++.+|.... ...++....+.+++++.+.... ...
T Consensus 223 ~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~ 297 (345)
T cd08287 223 EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG-GVELDVRELFFRNVGLAGGPAP---VRR 297 (345)
T ss_pred ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC-CCccCHHHHHhcceEEEEecCC---cHH
Confidence 778888888887778999999999876889999999999 99999987653 3445553445689999875422 245
Q ss_pred CHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 207 DLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
.++++++++.++.+++.+++++.+++++++++++.+.++...|++|++
T Consensus 298 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~~ 345 (345)
T cd08287 298 YLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLRP 345 (345)
T ss_pred HHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeCC
Confidence 789999999999977655567889999999999999887767999864
No 72
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.97 E-value=4.7e-29 Score=206.64 Aligned_cols=243 Identities=20% Similarity=0.247 Sum_probs=199.1
Q ss_pred CCCCcccccCCceeeeee-ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-C
Q 025336 2 LDGTSRMSVRGQKLYHIF-SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-G 79 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~-~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 79 (254)
|+++..|++ ||+|++.. +.|+|++|+.++...++++|+++++++++.++++++|||+++.....++++++|||+|+ |
T Consensus 79 G~~v~~~~~-Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g 157 (341)
T cd08290 79 GSGVKSLKP-GDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANS 157 (341)
T ss_pred CCCCCCCCC-CCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchh
Confidence 566777999 99999764 35899999999999999999999999999999999999999877788999999999986 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCc----ccHHHHHhcCCceEeCCCCCCCc---hHHHHHHHhhCCCCccEEEEcCCCh
Q 025336 80 TVGLGAVDGARMQGAAKIIGIDKNP----WKKEKGEAFGMTDFINPDDEPNK---SISELVKGITHGMGVDYCFECTGVP 152 (254)
Q Consensus 80 ~~G~~~~~~a~~~g~~~v~~v~~~~----~~~~~~~~~g~~~v~~~~~~~~~---~~~~~i~~~~~~~~~d~v~d~~g~~ 152 (254)
++|++++|+|+..|+ +++++..++ ++.++++++|++++++++. . ++...+....++ ++|+++||+|+.
T Consensus 158 ~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~-~~d~vld~~g~~ 232 (341)
T cd08290 158 AVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKALGADHVLTEEE---LRSLLATELLKSAPGG-RPKLALNCVGGK 232 (341)
T ss_pred HHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHHhcCCCEEEeCcc---cccccHHHHHHHHcCC-CceEEEECcCcH
Confidence 999999999999999 788876665 5688888899999998775 4 677778877777 899999999987
Q ss_pred hHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCC-------CCCHHHHHHHHhCCCCCCCCc
Q 025336 153 SLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPILLDKCKNKEFKLHQL 225 (254)
Q Consensus 153 ~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 225 (254)
.+...+++++++ |+++.+|........++...++.+++++.+.....+.. ...+..+++++.++.+...
T Consensus 233 -~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 308 (341)
T cd08290 233 -SATELARLLSPG-GTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP-- 308 (341)
T ss_pred -hHHHHHHHhCCC-CEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--
Confidence 677899999999 99999986543233455545566899999887543211 1247788899999986543
Q ss_pred eEEEe---ecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 226 LTHHV---KLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 226 ~~~~~---~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
....+ ++++++++++.+.++.. .|+|+++
T Consensus 309 ~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 309 PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 34456 99999999999987766 5999875
No 73
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.97 E-value=1.9e-28 Score=202.73 Aligned_cols=239 Identities=26% Similarity=0.409 Sum_probs=200.8
Q ss_pred CCCCcccccCCceeee------------------e---------eccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLYH------------------I---------FSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~------------------~---------~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|+++..+++ ||+|+. + ...|+|++|+.++...++++|+++++++++.++.++
T Consensus 72 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~ 150 (338)
T cd08254 72 GAGVTNFKV-GDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAV 150 (338)
T ss_pred CCCCccCCC-CCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchH
Confidence 667777889 999975 1 114899999999999999999999999999999999
Q ss_pred hhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHH
Q 025336 55 TTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVK 134 (254)
Q Consensus 55 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~ 134 (254)
.|||+++.....++++++|||.|+|++|++++++|+..|+ +|++++.++++.+.++++|.+.++++.+ ......+
T Consensus 151 ~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~~- 225 (338)
T cd08254 151 LTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD---DSPKDKK- 225 (338)
T ss_pred HHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC---cCHHHHH-
Confidence 9999998778889999999998889999999999999999 8999999999999999999988888776 5565656
Q ss_pred HhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHH
Q 025336 135 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDK 214 (254)
Q Consensus 135 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 214 (254)
+...+.++|+++||+|....+..++++++++ |+++.+|.... ...++...+..++.++.+++.. ....+..++++
T Consensus 226 ~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 300 (338)
T cd08254 226 AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD-KLTVDLSDLIARELRIIGSFGG---TPEDLPEVLDL 300 (338)
T ss_pred HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC-CCccCHHHHhhCccEEEEeccC---CHHHHHHHHHH
Confidence 5556668999999998776889999999999 99999987544 3345555667788888886532 34678889999
Q ss_pred HhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 215 CKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
++++.++.. .+.+++++++++++.+.+++. +|+|+++
T Consensus 301 l~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 301 IAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 999996643 468999999999999988776 5999875
No 74
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.97 E-value=2.3e-28 Score=202.75 Aligned_cols=243 Identities=25% Similarity=0.390 Sum_probs=198.0
Q ss_pred CCCCcccccCCceeeeee---------------------------ccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLYHIF---------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|+++..|++ ||+|+++. ..|+|++|+++|++.++++|+++++++++++ .++
T Consensus 68 g~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~ 145 (343)
T cd08236 68 GSGVDDLAV-GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPA 145 (343)
T ss_pred CCCCCcCCC-CCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chH
Confidence 566778999 99998751 3489999999999999999999999999887 678
Q ss_pred hhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHH
Q 025336 55 TTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVK 134 (254)
Q Consensus 55 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~ 134 (254)
++||+++. ...++++++|||+|+|.+|++++|+|+.+|+..|+++++++++.++++++|++.++++++ .. ...+.
T Consensus 146 ~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~---~~-~~~~~ 220 (343)
T cd08236 146 AVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE---ED-VEKVR 220 (343)
T ss_pred HHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc---cc-HHHHH
Confidence 89999984 788999999999988999999999999999943999988889999999999999998886 55 67777
Q ss_pred HhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCc-e-eeccHHHHHhCCCEEEeeecCCCC--CCCCHHH
Q 025336 135 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDT-M-VPLNVIALACGGRTLKGTTFGGIK--TKSDLPI 210 (254)
Q Consensus 135 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~ 210 (254)
+..+++++|+++||+|....+..++++++++ |+++.+|..... . ...++..++.++.++.++...... ..+.+++
T Consensus 221 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (343)
T cd08236 221 ELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRT 299 (343)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHH
Confidence 7777778999999998766789999999999 999999865431 1 122334455688999888753221 1456888
Q ss_pred HHHHHhCCCCCCCCceEEEeecccHHHHHHHHcC-CCe-eEEEE
Q 025336 211 LLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ-PDC-VKVLI 252 (254)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~-~k~vi 252 (254)
++++++++.+.+.+.+...+++++++++++.+.+ +.. .|+|+
T Consensus 300 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 300 ALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred HHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 9999999997644556678999999999999987 444 47764
No 75
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=2.7e-28 Score=199.60 Aligned_cols=242 Identities=23% Similarity=0.320 Sum_probs=197.5
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTV 81 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~ 81 (254)
|+++..+++ ||+|+.+. .|+|++|+.++++.++++|+++ ..++....+++++++++. ..+++++++|+|+|+|++
T Consensus 67 G~~v~~~~~-Gd~V~~~~-~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~v 141 (312)
T cd08269 67 GPGVRGLAV-GDRVAGLS-GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFI 141 (312)
T ss_pred CCCCcCCCC-CCEEEEec-CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHH
Confidence 566777889 99998764 4899999999999999999988 222222377889999875 888999999999988999
Q ss_pred HHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHH
Q 025336 82 GLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 161 (254)
Q Consensus 82 G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~ 161 (254)
|++++|+|+.+|+.+|+++.+++++.+.++++|++.+++++. .++.+.+.+++.+.++|+++||+|....+...+++
T Consensus 142 g~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~ 218 (312)
T cd08269 142 GLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---EAIVERVRELTGGAGADVVIEAVGHQWPLDLAGEL 218 (312)
T ss_pred HHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHH
Confidence 999999999999933999988888999999999988888776 77888888888777999999999876678999999
Q ss_pred cccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCC-CCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHH
Q 025336 162 TKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGI-KTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 240 (254)
Q Consensus 162 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 240 (254)
++++ |+++.+|.......++++..+.++++.+.+...... ...+.+++++++++++.++....+.+.+++++++++++
T Consensus 219 l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~ 297 (312)
T cd08269 219 VAER-GRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFE 297 (312)
T ss_pred hccC-CEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHH
Confidence 9999 999999865433345555566668888887654322 12457889999999999765444567899999999999
Q ss_pred HHcCCCe--eEEEE
Q 025336 241 LLKQPDC--VKVLI 252 (254)
Q Consensus 241 ~~~~~~~--~k~vi 252 (254)
.+.+++. +|+++
T Consensus 298 ~~~~~~~~~~~~~~ 311 (312)
T cd08269 298 AARRRPDGFIKGVI 311 (312)
T ss_pred HHHhCCCCceEEEe
Confidence 9988755 68886
No 76
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.97 E-value=3.4e-28 Score=201.45 Aligned_cols=242 Identities=24% Similarity=0.361 Sum_probs=196.3
Q ss_pred CCCCcccccCCceeee---------------------------eeccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLYH---------------------------IFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~---------------------------~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|+++.+|++ ||+|+. +...|+|++|++++++.++++|++++++++ +++.++
T Consensus 71 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~ 148 (340)
T TIGR00692 71 GPGVEGIKV-GDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPL 148 (340)
T ss_pred CCCCCcCCC-CCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchH
Confidence 667778999 999986 223589999999999999999999998655 466888
Q ss_pred hhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHH
Q 025336 55 TTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVK 134 (254)
Q Consensus 55 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~ 134 (254)
.+|++++ .....++++|+|.|+|++|++++|+++.+|.+.|+++++++++.+.++++|++.++++.+ .++.+.+.
T Consensus 149 ~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~l~ 223 (340)
T TIGR00692 149 GNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---EDVVKEVA 223 (340)
T ss_pred HHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---cCHHHHHH
Confidence 8998876 345678999999888999999999999999944888888888999999999988898877 77888888
Q ss_pred HhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHH-HHHhCCCEEEeeecCCCCCCCCHHHHHH
Q 025336 135 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVI-ALACGGRTLKGTTFGGIKTKSDLPILLD 213 (254)
Q Consensus 135 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 213 (254)
+..+++++|+++||+|+...+...+++++++ |+++.+|.... ...++.. .+.++++++.+... ....+.+.++++
T Consensus 224 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 299 (340)
T TIGR00692 224 DLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPG-KVTIDFTNKVIFKGLTIYGITG--RHMFETWYTVSR 299 (340)
T ss_pred HhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCC-CcccchhhhhhhcceEEEEEec--CCchhhHHHHHH
Confidence 8877778999999998766789999999999 99999987643 2222223 45557888877552 112345788999
Q ss_pred HHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 214 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
+++++++++.+.+.+.++++++.++++.+.+++.+|+|+++
T Consensus 300 ~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 300 LIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 99999987656677889999999999998877657999874
No 77
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.97 E-value=2.7e-28 Score=201.74 Aligned_cols=215 Identities=22% Similarity=0.406 Sum_probs=181.8
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
.|+|+||+.++++.++++|+++++++++.+++.+.|||+++ ....++++++++|.|+|++|++++++++.+|+ +++++
T Consensus 122 ~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~ 199 (337)
T cd05283 122 QGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAF 199 (337)
T ss_pred CCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEE
Confidence 58999999999999999999999999999999999999997 45568999999998889999999999999999 89999
Q ss_pred cCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCcee
Q 025336 101 DKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMV 180 (254)
Q Consensus 101 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 180 (254)
++++++.++++++|++.+++.+. .+.... . +.++|+++||++....+..++++++++ |+++.+|.... ..
T Consensus 200 ~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~---~--~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~ 269 (337)
T cd05283 200 SRSPSKKEDALKLGADEFIATKD---PEAMKK---A--AGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEE-PL 269 (337)
T ss_pred cCCHHHHHHHHHcCCcEEecCcc---hhhhhh---c--cCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCC-CC
Confidence 99999999999999998888765 333221 1 348999999999875589999999999 99999998655 22
Q ss_pred eccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEe
Q 025336 181 PLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 181 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
++++..++.++.++.+.... ..+.++.+++++++++++ +.+ +.++++++++||+.+.+++. +|+||+
T Consensus 270 ~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~l~--~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 270 PVPPFPLIFGRKSVAGSLIG---GRKETQEMLDFAAEHGIK--PWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred ccCHHHHhcCceEEEEeccc---CHHHHHHHHHHHHhCCCc--cce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 55666666799999998754 246788999999999854 444 68999999999999998887 598874
No 78
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.97 E-value=6.8e-28 Score=199.72 Aligned_cols=241 Identities=20% Similarity=0.297 Sum_probs=195.2
Q ss_pred CCCCcccccCCceeeee---------------------------eccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLYHI---------------------------FSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~---------------------------~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|+++..+++ ||+|+.. ..+|+|++|+.+|++.++++|+++++++++.+ .++
T Consensus 73 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~ 150 (341)
T PRK05396 73 GSEVTGFKV-GDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPF 150 (341)
T ss_pred CCCCCcCCC-CCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHH
Confidence 677788999 9999854 13589999999999999999999999888754 566
Q ss_pred hhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHH
Q 025336 55 TTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVK 134 (254)
Q Consensus 55 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~ 134 (254)
.+++.++.. ...+|++|+|.|+|++|++++|+++.+|++++++++.++++.++++++|++.++++++ .++.+.+.
T Consensus 151 ~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~ 225 (341)
T PRK05396 151 GNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK---EDLRDVMA 225 (341)
T ss_pred HHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHHH
Confidence 666665532 3458999999988999999999999999856888888889999999999999998887 77888888
Q ss_pred HhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHH
Q 025336 135 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDK 214 (254)
Q Consensus 135 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 214 (254)
+++.++++|++|||.|+...+..++++++++ |+++.+|.... ..+++...+..+++++.++.... ..+.+..++++
T Consensus 226 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~ 301 (341)
T PRK05396 226 ELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG-DMAIDWNKVIFKGLTIKGIYGRE--MFETWYKMSAL 301 (341)
T ss_pred HhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC-CCcccHHHHhhcceEEEEEEccC--ccchHHHHHHH
Confidence 8887779999999999877889999999999 99999987654 23334456666888888875221 23456678888
Q ss_pred HhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 215 CKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
+.++ +++.+.+.+.+++++++++|+.+.++..+|++++.
T Consensus 302 ~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~ 340 (341)
T PRK05396 302 LQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDW 340 (341)
T ss_pred HHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEec
Confidence 9888 54666677889999999999998877656998863
No 79
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.97 E-value=2.3e-28 Score=202.13 Aligned_cols=239 Identities=15% Similarity=0.195 Sum_probs=189.4
Q ss_pred CCCCCcccccCCceeeeee---ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCC-----CCE
Q 025336 1 MLDGTSRMSVRGQKLYHIF---SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEK-----GSS 72 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~---~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~ 72 (254)
+|+++.+|++ ||+|+++. ..|+|++|++++++.++++|+++++++++.++++++|||+++....++++ +++
T Consensus 73 vG~~v~~~~~-Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~ 151 (336)
T TIGR02817 73 VGDEVTLFKP-GDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRA 151 (336)
T ss_pred eCCCCCCCCC-CCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCE
Confidence 3677888999 99998753 25899999999999999999999999999999999999999877888877 999
Q ss_pred EEEEcC-CHHHHHHHHHHHHc-CCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCC
Q 025336 73 VAVLGL-GTVGLGAVDGARMQ-GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 150 (254)
Q Consensus 73 vlI~G~-g~~G~~~~~~a~~~-g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g 150 (254)
|||+|+ |++|++++|+||.+ |+ +|++++.++++.++++++|+++++++. .++...+.+. .++++|+++|+++
T Consensus 152 vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~----~~~~~~i~~~-~~~~vd~vl~~~~ 225 (336)
T TIGR02817 152 LLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHS----KPLKAQLEKL-GLEAVSYVFSLTH 225 (336)
T ss_pred EEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECC----CCHHHHHHHh-cCCCCCEEEEcCC
Confidence 999986 99999999999998 99 899998999999999999999998754 3566677765 3448999999987
Q ss_pred ChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecC--CCCC-------CCCHHHHHHHHhCCCCC
Q 025336 151 VPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFG--GIKT-------KSDLPILLDKCKNKEFK 221 (254)
Q Consensus 151 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~-------~~~~~~~~~~~~~~~~~ 221 (254)
+...+...+++++++ |+++.++.. ..++...+..+++++.+.... .... ...++++++++.++.++
T Consensus 226 ~~~~~~~~~~~l~~~-G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 300 (336)
T TIGR02817 226 TDQHFKEIVELLAPQ-GRFALIDDP----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIR 300 (336)
T ss_pred cHHHHHHHHHHhccC-CEEEEEccc----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCee
Confidence 656789999999999 999988532 233333444455666654322 1110 13467889999999855
Q ss_pred CCCceEEEe---ecccHHHHHHHHcCCCe-eEEEEe
Q 025336 222 LHQLLTHHV---KLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 222 ~~~~~~~~~---~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
+.+.+.+ +++++++||+.+.+++. +|++++
T Consensus 301 --~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 301 --TTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred --ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 3333445 46899999999988776 588764
No 80
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.96 E-value=1.6e-27 Score=199.70 Aligned_cols=223 Identities=25% Similarity=0.312 Sum_probs=184.0
Q ss_pred CcceeeEEecCC--ceEEcCCCCCcc---ccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCe
Q 025336 22 STWSEYMVIDAN--YVVRVDPSIDLS---HASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAK 96 (254)
Q Consensus 22 g~~a~~~~v~~~--~v~~~p~~~~~~---~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~ 96 (254)
|+|++|+++|.. .++++|++++++ +++.++.+++|||+++ ...++++|++|+|.|+|++|++++|+++.+|+.+
T Consensus 125 g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~ 203 (375)
T cd08282 125 GGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASR 203 (375)
T ss_pred CeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 889999999976 899999999998 5677888999999998 7889999999999988999999999999999757
Q ss_pred EEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChh-----------HHHHHHHHcccC
Q 025336 97 IIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS-----------LLSEALETTKVG 165 (254)
Q Consensus 97 v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~-----------~~~~~~~~l~~~ 165 (254)
|+++++++++.+.++++|+. .+++++ .++...+.++++ +++|+++||+|+.. .+..++++++++
T Consensus 204 vi~~~~~~~~~~~~~~~g~~-~v~~~~---~~~~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 278 (375)
T cd08282 204 VYVVDHVPERLDLAESIGAI-PIDFSD---GDPVEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG 278 (375)
T ss_pred EEEECCCHHHHHHHHHcCCe-EeccCc---ccHHHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC
Confidence 88898999999999999984 567766 677888888776 58999999999762 478999999999
Q ss_pred CcEEEEEccCCC------------ceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecc
Q 025336 166 KGKVIVIGVGVD------------TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLE 233 (254)
Q Consensus 166 ~G~~v~~g~~~~------------~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (254)
|+++.+|.... ....++...+..++..+.+... .....+.+++++++++++++..+++++++++
T Consensus 279 -g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~ 354 (375)
T cd08282 279 -GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLE 354 (375)
T ss_pred -cEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHH
Confidence 99988876432 1133455556667777766542 2345688899999999977655578899999
Q ss_pred cHHHHHHHHcCCCeeEEEEeC
Q 025336 234 EIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 234 ~~~~a~~~~~~~~~~k~vi~~ 254 (254)
+++++++.+.++...|+|+++
T Consensus 355 ~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 355 DAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred HHHHHHHHHhcCCceEEEeCC
Confidence 999999999887755998864
No 81
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.96 E-value=1.3e-27 Score=199.66 Aligned_cols=243 Identities=21% Similarity=0.393 Sum_probs=192.3
Q ss_pred CCCCcccccCCceeeee------------------------ec----cCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 2 LDGTSRMSVRGQKLYHI------------------------FS----CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~------------------------~~----~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
|+++.+|++ ||+|+.. .+ .|+|++|+++|...++++|++++++++++. .+
T Consensus 89 G~~v~~~~~-Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~ 166 (364)
T PLN02702 89 GSEVKHLVV-GDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EP 166 (364)
T ss_pred CCCCCCCCC-CCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hH
Confidence 566778899 9999751 11 489999999999999999999999988752 34
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
+.++++++ ...++.++++|||+|+|++|++++|+++.+|+..++++++++++.+.++++|++.++++.. ...++.+.+
T Consensus 167 ~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~ 244 (364)
T PLN02702 167 LSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVST-NIEDVESEV 244 (364)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCc-ccccHHHHH
Confidence 55678777 7788999999999998999999999999999966888888889999999999988765431 014566666
Q ss_pred HHh--hCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHH
Q 025336 134 KGI--THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPIL 211 (254)
Q Consensus 134 ~~~--~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 211 (254)
.++ ..+.++|+++||+|+...+..++++++++ |+++.+|.... ...+....+..+++++.+++.. ...++.+
T Consensus 245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~ 318 (364)
T PLN02702 245 EEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN-EMTVPLTPAAAREVDVVGVFRY----RNTWPLC 318 (364)
T ss_pred HHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC-CCcccHHHHHhCccEEEEeccC----hHHHHHH
Confidence 554 22348999999999766889999999999 99999996543 2334455566789999887532 3468889
Q ss_pred HHHHhCCCCCCCCceEEEeec--ccHHHHHHHHcCCCe-eEEEEeC
Q 025336 212 LDKCKNKEFKLHQLLTHHVKL--EEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+++++++.+++++.+++.|++ +++++|++.+.+++. +|+++.+
T Consensus 319 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~~ 364 (364)
T PLN02702 319 LEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 364 (364)
T ss_pred HHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEeC
Confidence 999999997766667778666 799999999887765 6998863
No 82
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.96 E-value=1.3e-28 Score=202.85 Aligned_cols=246 Identities=20% Similarity=0.219 Sum_probs=194.9
Q ss_pred CCCCcccccCCceeeee-eccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-C
Q 025336 2 LDGTSRMSVRGQKLYHI-FSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-G 79 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~-~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 79 (254)
|+++..+++ ||+|+.. .+.|+|++|+.++...++++|+++++++++.++..+.+|+.++.....++++++|+|+|+ |
T Consensus 73 G~~v~~~~~-Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g 151 (327)
T PRK10754 73 GSGVKHIKV-GDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAG 151 (327)
T ss_pred CCCCCCCCC-CCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCc
Confidence 567777889 9999754 345899999999999999999999999999988999999999877788999999999975 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHH
Q 025336 80 TVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 159 (254)
Q Consensus 80 ~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~ 159 (254)
.+|++++|+++.+|+ +|++++.++++.++++++|++++++.+. .++.+.+++.+++.++|+++||+++. .+...+
T Consensus 152 ~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~ 226 (327)
T PRK10754 152 GVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYRE---ENIVERVKEITGGKKVRVVYDSVGKD-TWEASL 226 (327)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCCC---CcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHH
Confidence 999999999999999 8999989999999999999988988876 77888888888877999999999986 778899
Q ss_pred HHcccCCcEEEEEccCCCceeeccHHHHHhCCCEE-Eeeec-CCCCCC----CCHHHHHHHHhCCCCCCCCceEEEeecc
Q 025336 160 ETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTL-KGTTF-GGIKTK----SDLPILLDKCKNKEFKLHQLLTHHVKLE 233 (254)
Q Consensus 160 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i-~g~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (254)
++++++ |+++.+|........++...+..++... ..... ..+... ..+..+++++.++.+++.....+.|+++
T Consensus 227 ~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~ 305 (327)
T PRK10754 227 DCLQRR-GLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLK 305 (327)
T ss_pred HHhccC-CEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHH
Confidence 999999 9999998764311223333333222211 11111 111111 1244578899999977555456789999
Q ss_pred cHHHHHHHHcCCCe-eEEEEeC
Q 025336 234 EIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 234 ~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+++++++.+.++.. .|+||.+
T Consensus 306 ~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 306 DAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred HHHHHHHHHHcCCCcceEEEeC
Confidence 99999999988776 5999863
No 83
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.96 E-value=1.4e-27 Score=197.72 Aligned_cols=237 Identities=24% Similarity=0.348 Sum_probs=190.7
Q ss_pred CCCCcccccCCceeeee------------------------e--------ccCcceeeEEecCCceEEcCCCCCcccccc
Q 025336 2 LDGTSRMSVRGQKLYHI------------------------F--------SCSTWSEYMVIDANYVVRVDPSIDLSHASF 49 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~------------------------~--------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~ 49 (254)
|+++..|++ ||+|+.. . ..|+|++|++++++.++++|+++++++++.
T Consensus 69 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~ 147 (339)
T cd08232 69 GPGVTGLAP-GQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL 147 (339)
T ss_pred CCCCCcCCC-CCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh
Confidence 667778999 9999751 1 248999999999999999999999999876
Q ss_pred ccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchH
Q 025336 50 LSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSI 129 (254)
Q Consensus 50 ~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 129 (254)
+.++++||+++.....+ ++++|||.|+|.+|++++|+++.+|+.+++++++++++.+.++++|+++++++++ .++
T Consensus 148 -~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~---~~~ 222 (339)
T cd08232 148 -AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR---DPL 222 (339)
T ss_pred -cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc---hhh
Confidence 57888999988655555 8999999988999999999999999867889888888888889999999998875 432
Q ss_pred HHHHHHhh-CCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCH
Q 025336 130 SELVKGIT-HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDL 208 (254)
Q Consensus 130 ~~~i~~~~-~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 208 (254)
.+.. ...++|+++||.++...+...+++++++ |+++.+|.... ....++..++.+++++.+.... .+.+
T Consensus 223 ----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~ 292 (339)
T cd08232 223 ----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGG-PVPLPLNALVAKELDLRGSFRF----DDEF 292 (339)
T ss_pred ----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC-CccCcHHHHhhcceEEEEEecC----HHHH
Confidence 2222 2336999999999765789999999999 99999986542 3344444455588888876522 3568
Q ss_pred HHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 209 PILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
++++++++++.+++.+.+.++|++++++++++.+.++.. +|+|+++
T Consensus 293 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 293 AEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 889999999997766667788999999999999877665 6999864
No 84
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.96 E-value=1.3e-27 Score=197.96 Aligned_cols=241 Identities=26% Similarity=0.409 Sum_probs=193.7
Q ss_pred CCCCcccccCCceeeeee---------------------------ccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLYHIF---------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|+++..|++ ||+|++.. ..|+|++|++++++.++++|++++++.+ +++.++
T Consensus 73 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~ 150 (341)
T cd05281 73 GEGVTRVKV-GDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPL 150 (341)
T ss_pred CCCCCCCCC-CCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHH
Confidence 556667889 99998641 3489999999999999999999988554 566788
Q ss_pred hhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHH
Q 025336 55 TTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVK 134 (254)
Q Consensus 55 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~ 134 (254)
.++++++. ...+++++|||.|+|++|++++|+++.+|+.+|+++++++++.+.++++|++++++++. .++. .+.
T Consensus 151 ~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~-~~~ 224 (341)
T cd05281 151 GNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE---EDVV-EVK 224 (341)
T ss_pred HHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccc---ccHH-HHH
Confidence 88888764 44578999999988999999999999999856888888889999999999998888876 6777 788
Q ss_pred HhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHH-HHHhCCCEEEeeecCCCCCCCCHHHHHH
Q 025336 135 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVI-ALACGGRTLKGTTFGGIKTKSDLPILLD 213 (254)
Q Consensus 135 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 213 (254)
+..+++++|++|||+|+......++++++++ |+++.+|.... ...+++. .+..+++.+.+.... ...+.+.++++
T Consensus 225 ~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 300 (341)
T cd05281 225 SVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG-PVDIDLNNLVIFKGLTVQGITGR--KMFETWYQVSA 300 (341)
T ss_pred HHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC-CcccccchhhhccceEEEEEecC--CcchhHHHHHH
Confidence 8888779999999999876789999999999 99999986544 2222222 245578888776522 12356788999
Q ss_pred HHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 214 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
++.++.+.+.+.+...+++++++++|+.+.++..+|+|+++
T Consensus 301 ~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~ 341 (341)
T cd05281 301 LLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP 341 (341)
T ss_pred HHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence 99999977666677789999999999999887745999864
No 85
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.96 E-value=1.3e-27 Score=197.87 Aligned_cols=237 Identities=22% Similarity=0.329 Sum_probs=193.0
Q ss_pred CCCCcccccCCceeeee----------------------------eccCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 2 LDGTSRMSVRGQKLYHI----------------------------FSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~----------------------------~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
|+++..|++ ||+|+.. ...|+|++|+.+|...++++|+++++++++.++.+
T Consensus 69 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~ 147 (338)
T PRK09422 69 GPGVTSLKV-GDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCA 147 (338)
T ss_pred CCCCccCCC-CCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcc
Confidence 667778899 9999741 12489999999999999999999999999999999
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHH
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARM-QGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISEL 132 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~-~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 132 (254)
++|||+++ ...+++++++|||+|+|++|++++++|+. .|+ +|+++++++++.+.++++|++.+++++. ..++.+.
T Consensus 148 ~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~ 223 (338)
T PRK09422 148 GVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR--VEDVAKI 223 (338)
T ss_pred hhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc--cccHHHH
Confidence 99999998 77889999999999999999999999998 599 8999999999999999999998888752 1445666
Q ss_pred HHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHH
Q 025336 133 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 212 (254)
Q Consensus 133 i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 212 (254)
+++..+ ++|.++++.++...+..++++++++ |+++.+|.... ..+++...+..++..+.++... ..+.+++++
T Consensus 224 v~~~~~--~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 296 (338)
T PRK09422 224 IQEKTG--GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSLVG---TRQDLEEAF 296 (338)
T ss_pred HHHhcC--CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC-CceecHHHHhhcCcEEEEecCC---CHHHHHHHH
Confidence 776654 6886655555555889999999999 99999987644 3444555566688888776432 245688899
Q ss_pred HHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEe
Q 025336 213 DKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
+++++++++ +.+. .+++++++++|+.+.++.. +|++++
T Consensus 297 ~l~~~g~l~--~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~ 335 (338)
T PRK09422 297 QFGAEGKVV--PKVQ-LRPLEDINDIFDEMEQGKIQGRMVID 335 (338)
T ss_pred HHHHhCCCC--ccEE-EEcHHHHHHHHHHHHcCCccceEEEe
Confidence 999999854 4454 5899999999999988766 588875
No 86
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=6.5e-28 Score=196.79 Aligned_cols=234 Identities=22% Similarity=0.302 Sum_probs=191.1
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-CH
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GT 80 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 80 (254)
|+++..|++ ||+|+++...|+|++|+.++.+.++++|+++++++++.+++.+.|||+++...... ++++|+|+|+ |+
T Consensus 67 G~~v~~~~~-Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~ 144 (305)
T cd08270 67 AADGSGPAV-GARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGG 144 (305)
T ss_pred CCCCCCCCC-CCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcH
Confidence 667778899 99999886569999999999999999999999999999999999999998655544 5999999987 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHH
Q 025336 81 VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 160 (254)
Q Consensus 81 ~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~ 160 (254)
+|++++++++..|+ +|+.+++++++.+.++++|++.+++... ++.+ +++|+++||+|+. .+..+++
T Consensus 145 ~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~-~~~d~vl~~~g~~-~~~~~~~ 210 (305)
T cd08270 145 VGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS-----------ELSG-APVDLVVDSVGGP-QLARALE 210 (305)
T ss_pred HHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc-----------cccC-CCceEEEECCCcH-HHHHHHH
Confidence 99999999999999 8999999999999999999876654332 1222 3799999999987 7899999
Q ss_pred HcccCCcEEEEEccCCCceeeccHHHHHh--CCCEEEeeecCC-CCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHH
Q 025336 161 TTKVGKGKVIVIGVGVDTMVPLNVIALAC--GGRTLKGTTFGG-IKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDK 237 (254)
Q Consensus 161 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (254)
+++++ |+++.+|........++...+.. ++.++.++.... ......+..+++++++++++. .+.+.++++++++
T Consensus 211 ~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~ 287 (305)
T cd08270 211 LLAPG-GTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDP--RIGWRGSWTEIDE 287 (305)
T ss_pred HhcCC-CEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccc--eeccEEcHHHHHH
Confidence 99999 99999987543234445555553 588888887553 112345788899999999664 3667899999999
Q ss_pred HHHHHcCCCe-eEEEEeC
Q 025336 238 AIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 238 a~~~~~~~~~-~k~vi~~ 254 (254)
+++.+.++.. +|+|+++
T Consensus 288 a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 288 AAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHcCCCCceEEEeC
Confidence 9999987766 5999875
No 87
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=2.9e-29 Score=220.40 Aligned_cols=236 Identities=18% Similarity=0.238 Sum_probs=206.4
Q ss_pred CceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE-cCCHHHHHHHHHHH
Q 025336 12 GQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVL-GLGTVGLGAVDGAR 90 (254)
Q Consensus 12 Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~-G~g~~G~~~~~~a~ 90 (254)
|.||++...--++++.+.++.+.+|.+|.+.++++|++.|+.|.|||++|..+++.++|++|||+ |+|++|++++.+|.
T Consensus 1495 GrRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiAL 1574 (2376)
T KOG1202|consen 1495 GRRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIAL 1574 (2376)
T ss_pred CcEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHH
Confidence 88888887667899999999999999999999999999999999999999999999999999999 56999999999999
Q ss_pred HcCCCeEEEEcCCcccHHHHHhc----CCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCC
Q 025336 91 MQGAAKIIGIDKNPWKKEKGEAF----GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK 166 (254)
Q Consensus 91 ~~g~~~v~~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~ 166 (254)
..|+ +|+.++.++||++++... -..++-|.++ .++.+.+.+.+.|+|+|+|++....+ .+..+++|++..
T Consensus 1575 a~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd---tsFEq~vl~~T~GrGVdlVLNSLaeE-kLQASiRCLa~~- 1648 (2376)
T KOG1202|consen 1575 AHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRD---TSFEQHVLWHTKGRGVDLVLNSLAEE-KLQASIRCLALH- 1648 (2376)
T ss_pred HcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccc---ccHHHHHHHHhcCCCeeeehhhhhHH-HHHHHHHHHHhc-
Confidence 9999 999999999999998652 3566778888 99999999999999999999999987 789999999999
Q ss_pred cEEEEEccCCC-ceeeccHHHHHhCCCEEEeeecCCCC--CCCCHHHHHHHHhCCCCC--CCCceEEEeecccHHHHHHH
Q 025336 167 GKVIVIGVGVD-TMVPLNVIALACGGRTLKGTTFGGIK--TKSDLPILLDKCKNKEFK--LHQLLTHHVKLEEIDKAIQL 241 (254)
Q Consensus 167 G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~ 241 (254)
||+..+|-... +..++.+.-++ ++.++.|..+.+.- +.+++.++..++++|.-. .+|+.+++|+-.++++||+.
T Consensus 1649 GRFLEIGKfDLSqNspLGMavfL-kNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRf 1727 (2376)
T KOG1202|consen 1649 GRFLEIGKFDLSQNSPLGMAVFL-KNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRF 1727 (2376)
T ss_pred CeeeeecceecccCCcchhhhhh-cccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHH
Confidence 99999997765 55667776666 99999998755443 245577777777766433 67888999999999999999
Q ss_pred HcCCCee-EEEEeC
Q 025336 242 LKQPDCV-KVLITI 254 (254)
Q Consensus 242 ~~~~~~~-k~vi~~ 254 (254)
|.+|+.+ |+||++
T Consensus 1728 MasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1728 MASGKHIGKVVIKV 1741 (2376)
T ss_pred HhccCccceEEEEE
Confidence 9999985 999874
No 88
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.96 E-value=2.4e-27 Score=195.86 Aligned_cols=238 Identities=22% Similarity=0.364 Sum_probs=193.8
Q ss_pred CCCCcccccCCceeeee------------------------e---ccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLYHI------------------------F---SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~------------------------~---~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|+++..+++ ||+|+.. . ..|+|++|+.+|++.++++|+++++.+++.+ .++
T Consensus 68 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~ 145 (334)
T cd08234 68 GSKVTGFKV-GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPL 145 (334)
T ss_pred CCCCCCCCC-CCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHH
Confidence 667778999 9999751 1 2489999999999999999999999998766 778
Q ss_pred hhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHH
Q 025336 55 TTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVK 134 (254)
Q Consensus 55 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~ 134 (254)
.++++++ ...+++++++|||+|+|.+|++++++|+..|+++|+++++++++.++++++|++.++++.+ .+....
T Consensus 146 ~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~-- 219 (334)
T cd08234 146 SCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR---EDPEAQ-- 219 (334)
T ss_pred HHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC---CCHHHH--
Confidence 8999988 7889999999999988999999999999999944888889999999999999888888776 554444
Q ss_pred HhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-ceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHH
Q 025336 135 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLD 213 (254)
Q Consensus 135 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 213 (254)
+...++++|+++||++....+...+++++++ |+++.+|.... ...+++...+..+++++.+.... ...++++++
T Consensus 220 ~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 294 (334)
T cd08234 220 KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PYTFPRAIA 294 (334)
T ss_pred HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HHHHHHHHH
Confidence 3445558999999998766788999999999 99999987653 23445555555578888877532 345888999
Q ss_pred HHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEE
Q 025336 214 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 252 (254)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 252 (254)
++.++++...+.++.++++++++++++.+.+...+|+||
T Consensus 295 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 333 (334)
T cd08234 295 LLESGKIDVKGLVSHRLPLEEVPEALEGMRSGGALKVVV 333 (334)
T ss_pred HHHcCCCChhhhEEEEecHHHHHHHHHHHhcCCceEEEe
Confidence 999999776555677899999999999998733368876
No 89
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.96 E-value=3e-27 Score=193.60 Aligned_cols=244 Identities=23% Similarity=0.277 Sum_probs=200.9
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-CH
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GT 80 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 80 (254)
|+++.++++ ||+|+++...|+|++|+.++.+.++++|+.+++++++.++..++++++++....+++++++|||+|+ |+
T Consensus 70 g~~~~~~~~-G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~ 148 (320)
T cd05286 70 GPGVTGFKV-GDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGG 148 (320)
T ss_pred CCCCCCCCC-CCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCch
Confidence 566778899 9999977535899999999999999999999999999999999999999888889999999999995 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHH
Q 025336 81 VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 160 (254)
Q Consensus 81 ~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~ 160 (254)
+|++++++++.+|+ +|++++.++++.+.++++|++.+++..+ .++...+.+.+.+.++|.++||+++. .+...++
T Consensus 149 ~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~ 223 (320)
T cd05286 149 VGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRD---EDFVERVREITGGRGVDVVYDGVGKD-TFEGSLD 223 (320)
T ss_pred HHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCc---hhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHH
Confidence 99999999999999 8999989999999999999988888776 67888888887777899999999986 7889999
Q ss_pred HcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCC-----CCCHHHHHHHHhCCCCCCCCceEEEeecccH
Q 025336 161 TTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKT-----KSDLPILLDKCKNKEFKLHQLLTHHVKLEEI 235 (254)
Q Consensus 161 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (254)
+++++ |+++.+|........++...+..+++++.+.....+.. ...+.++++++.++.++. ..++.|+++++
T Consensus 224 ~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~ 300 (320)
T cd05286 224 SLRPR-GTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKV--EIGKRYPLADA 300 (320)
T ss_pred hhccC-cEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcC--cccceEcHHHH
Confidence 99999 99999987654222344444546888887665332221 123456788888888554 35678999999
Q ss_pred HHHHHHHcCCCe-eEEEEeC
Q 025336 236 DKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 236 ~~a~~~~~~~~~-~k~vi~~ 254 (254)
+++|+.+.++.. .|+++++
T Consensus 301 ~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 301 AQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred HHHHHHHHcCCCCceEEEeC
Confidence 999999987766 5888864
No 90
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.96 E-value=1.8e-27 Score=196.02 Aligned_cols=239 Identities=19% Similarity=0.204 Sum_probs=184.3
Q ss_pred CcccccCCceeeeee------ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHh--cCC-CCCCEEEE
Q 025336 5 TSRMSVRGQKLYHIF------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKE--AEV-EKGSSVAV 75 (254)
Q Consensus 5 ~~~~~~~Gd~v~~~~------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~-~~~~~vlI 75 (254)
+..|++ ||+|+... ..|+|++|+++|++.++++|+++++++++.+++++.||+.++... ..+ .++++|||
T Consensus 74 ~~~~~~-Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (326)
T cd08289 74 DPRFKP-GDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLV 152 (326)
T ss_pred CCCCCC-CCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence 356788 99998753 358999999999999999999999999999999999999887532 233 34789999
Q ss_pred EcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhH
Q 025336 76 LGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSL 154 (254)
Q Consensus 76 ~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~ 154 (254)
+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++.++++++ . ..+.+.+.. +.++|+++||+|+. .
T Consensus 153 ~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~-~~~~~~~~~-~~~~d~vld~~g~~-~ 225 (326)
T cd08289 153 TGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE---L-QEESIKPLE-KQRWAGAVDPVGGK-T 225 (326)
T ss_pred EcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh---H-HHHHHHhhc-cCCcCEEEECCcHH-H
Confidence 987 9999999999999999 8999999999999999999988888764 3 345555654 45899999999985 7
Q ss_pred HHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCC---CCCceEEEee
Q 025336 155 LSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFK---LHQLLTHHVK 231 (254)
Q Consensus 155 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 231 (254)
+...+++++++ |+++.+|.......+++...++.++.++.+....... ......+++.+.. .+. ..+.+.++++
T Consensus 226 ~~~~~~~l~~~-G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 302 (326)
T cd08289 226 LAYLLSTLQYG-GSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEIT 302 (326)
T ss_pred HHHHHHHhhcC-CEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecC-chHHHHHHHHHHh-hcCccccccccceEee
Confidence 89999999999 9999999764323344455565689999997532110 1123334443332 221 2234578899
Q ss_pred cccHHHHHHHHcCCCe-eEEEEeC
Q 025336 232 LEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 232 ~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
++++++||+.+.+++. +|+++++
T Consensus 303 l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 303 LDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred HHHHHHHHHHHhcCcccceEEEeC
Confidence 9999999999988777 5998864
No 91
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.96 E-value=2.7e-27 Score=194.43 Aligned_cols=211 Identities=21% Similarity=0.302 Sum_probs=176.4
Q ss_pred cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 025336 21 CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGI 100 (254)
Q Consensus 21 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v 100 (254)
+|+|++|+++|++.++++|+++++++++.+ .++.+++.++ ...+++++++|||+|+|.+|++++|+++.+|+ +|+++
T Consensus 109 ~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~ 185 (319)
T cd08242 109 DGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLV 185 (319)
T ss_pred CCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEE
Confidence 589999999999999999999999888864 4555666554 78889999999999989999999999999999 79999
Q ss_pred cCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCcee
Q 025336 101 DKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMV 180 (254)
Q Consensus 101 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 180 (254)
+.++++.++++++|++.++++++ . +.+.++|+++||+|+...+..++++++++ |+++..+.... ..
T Consensus 186 ~~~~~~~~~~~~~g~~~~~~~~~---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~-~~ 251 (319)
T cd08242 186 GRHSEKLALARRLGVETVLPDEA---E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAG-PA 251 (319)
T ss_pred cCCHHHHHHHHHcCCcEEeCccc---c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CC
Confidence 89999999999999988877653 1 34458999999999866789999999999 99998776443 34
Q ss_pred eccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCeeEEEEeC
Q 025336 181 PLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 254 (254)
Q Consensus 181 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 254 (254)
.++...+..++.++.+...+ .+++++++++++++++.+.+++.|+++++++||+.+.++..+|+||++
T Consensus 252 ~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 252 SFDLTKAVVNEITLVGSRCG------PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP 319 (319)
T ss_pred ccCHHHheecceEEEEEecc------cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence 45555666688888887532 388899999999987667788899999999999999877667999874
No 92
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=4.5e-27 Score=194.23 Aligned_cols=242 Identities=25% Similarity=0.387 Sum_probs=201.8
Q ss_pred CCCCcccccCCceeeeee---------------------ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHH
Q 025336 2 LDGTSRMSVRGQKLYHIF---------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGA 60 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~ 60 (254)
|+++..|++ ||+|++.. ..|+|++|+.++.+.++++|+++++.+++.+++++++||++
T Consensus 73 G~~~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~ 151 (336)
T cd08276 73 GEGVTRFKV-GDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNA 151 (336)
T ss_pred CCCCcCCCC-CCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHH
Confidence 566677888 99998754 14789999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCC
Q 025336 61 AWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGM 140 (254)
Q Consensus 61 l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~ 140 (254)
+.....++++++|+|+|+|++|++++++++..|+ +|++++.++++.+.++++|.+.+++... ..++...+.+.+++.
T Consensus 152 l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~ 228 (336)
T cd08276 152 LFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT--TPDWGEEVLKLTGGR 228 (336)
T ss_pred HHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc--ccCHHHHHHHHcCCC
Confidence 8777889999999999889999999999999999 8999999999999998899988887653 135667788888777
Q ss_pred CccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCC
Q 025336 141 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEF 220 (254)
Q Consensus 141 ~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 220 (254)
++|.++|+++.. .+..++++++++ |+++.+|.............++.+++++.+..... ...+.++++++.++.+
T Consensus 229 ~~d~~i~~~~~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l 303 (336)
T cd08276 229 GVDHVVEVGGPG-TLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS---RAQFEAMNRAIEAHRI 303 (336)
T ss_pred CCcEEEECCChH-HHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc---HHHHHHHHHHHHcCCc
Confidence 999999999865 788999999999 99999997654222344556666999999987543 4568889999988875
Q ss_pred CCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 221 KLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 221 ~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
.. ..++.+++++++++|+.+.++.. .|+++++
T Consensus 304 ~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 304 RP--VIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred cc--ccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 43 34578999999999999887766 5888864
No 93
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.96 E-value=3.6e-27 Score=194.06 Aligned_cols=238 Identities=19% Similarity=0.221 Sum_probs=183.3
Q ss_pred CcccccCCceeeeee------ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhc--CCC-CCCEEEE
Q 025336 5 TSRMSVRGQKLYHIF------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEA--EVE-KGSSVAV 75 (254)
Q Consensus 5 ~~~~~~~Gd~v~~~~------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~--~~~-~~~~vlI 75 (254)
+..|++ ||+|++.. ..|+|++|+++|++.++++|+++++++++.+++.+.+|+.++.... ++. .+++|+|
T Consensus 74 ~~~~~~-Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (325)
T cd05280 74 DPRFRE-GDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV 152 (325)
T ss_pred CCCCCC-CCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEE
Confidence 345788 99998642 3589999999999999999999999999999999999999875443 335 3579999
Q ss_pred EcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhH
Q 025336 76 LGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSL 154 (254)
Q Consensus 76 ~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~ 154 (254)
+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++++++ . ...+.+...++++|+++||++++ .
T Consensus 153 ~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~--~~~~~~~~~~~~~d~vi~~~~~~-~ 225 (325)
T cd05280 153 TGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDRED---L--LDESKKPLLKARWAGAIDTVGGD-V 225 (325)
T ss_pred ECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchh---H--HHHHHHHhcCCCccEEEECCchH-H
Confidence 997 9999999999999999 8999999999999999999999887664 2 12223333444799999999986 7
Q ss_pred HHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCC---CCCHHHHHHHHhCCCCCCCCceEEEee
Q 025336 155 LSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPILLDKCKNKEFKLHQLLTHHVK 231 (254)
Q Consensus 155 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (254)
+...+++++++ |+++.+|.......+++...++.++.++.+........ ...++.+.+++..+. .+.+..+++
T Consensus 226 ~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 301 (325)
T cd05280 226 LANLLKQTKYG-GVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDL---LEIVVREIS 301 (325)
T ss_pred HHHHHHhhcCC-CEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCC---ccceeeEec
Confidence 89999999999 99999997654222445555545889998876543211 112333444444443 223667899
Q ss_pred cccHHHHHHHHcCCCe-eEEEEeC
Q 025336 232 LEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 232 ~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+++++++++.+.++.. +|+|+++
T Consensus 302 ~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 302 LEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHHHHHHHHHHhcCCcceEEEEeC
Confidence 9999999999988776 5999875
No 94
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.96 E-value=2.2e-27 Score=194.77 Aligned_cols=234 Identities=20% Similarity=0.322 Sum_probs=188.9
Q ss_pred cccccCCceeeeeec------cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-
Q 025336 6 SRMSVRGQKLYHIFS------CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL- 78 (254)
Q Consensus 6 ~~~~~~Gd~v~~~~~------~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~- 78 (254)
..+++ ||+|+++.. .|+|++|+.+++..++++|+++++++++.++.++.|||+++....+++++++|||+|+
T Consensus 74 ~~~~~-Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~ 152 (320)
T cd08243 74 GTFTP-GQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGT 152 (320)
T ss_pred CCCCC-CCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 35788 999987642 3899999999999999999999999999999999999999877788999999999987
Q ss_pred CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHH
Q 025336 79 GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEA 158 (254)
Q Consensus 79 g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~ 158 (254)
|++|++++|+|+.+|+ +|++++.++++.+.++++|++++++. . .++...+.++ ++++|+++||+++. .+...
T Consensus 153 g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~---~~~~~~i~~~--~~~~d~vl~~~~~~-~~~~~ 224 (320)
T cd08243 153 SSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-D---GAIAEQLRAA--PGGFDKVLELVGTA-TLKDS 224 (320)
T ss_pred ChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-C---ccHHHHHHHh--CCCceEEEECCChH-HHHHH
Confidence 9999999999999999 89999899999999999999888754 3 5677777777 45899999999986 78999
Q ss_pred HHHcccCCcEEEEEccCCC-ce-eeccHHHHH--hCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeeccc
Q 025336 159 LETTKVGKGKVIVIGVGVD-TM-VPLNVIALA--CGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEE 234 (254)
Q Consensus 159 ~~~l~~~~G~~v~~g~~~~-~~-~~~~~~~~~--~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (254)
+++++++ |+++.+|...+ .. ......... .++..+.+....... ...+++++++++++.++. ..++.+++++
T Consensus 225 ~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ 300 (320)
T cd08243 225 LRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-QTPLQELFDFVAAGHLDI--PPSKVFTFDE 300 (320)
T ss_pred HHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh-HHHHHHHHHHHHCCceec--ccccEEcHHH
Confidence 9999999 99999997533 11 111122222 467777776533211 235778889999998653 3567899999
Q ss_pred HHHHHHHHcCCCe-eEEEE
Q 025336 235 IDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 235 ~~~a~~~~~~~~~-~k~vi 252 (254)
+++|++.+.++.. .|+|+
T Consensus 301 ~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 301 IVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred HHHHHHHHHhCCCCCcEEe
Confidence 9999999987766 47775
No 95
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.96 E-value=1.4e-27 Score=183.63 Aligned_cols=240 Identities=22% Similarity=0.281 Sum_probs=192.8
Q ss_pred CCCcccccCCceeeeeeccCcceeeEEecCCc--eEEcCC--CCCccc-cccccchhhhhhHHHHHhcCCCCCCEEEEEc
Q 025336 3 DGTSRMSVRGQKLYHIFSCSTWSEYMVIDANY--VVRVDP--SIDLSH-ASFLSCGFTTGFGAAWKEAEVEKGSSVAVLG 77 (254)
Q Consensus 3 ~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~--v~~~p~--~~~~~~-aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G 77 (254)
++.+.|++ ||.|+++.+ |.||.++++.. .+++|. +.++.- ..++..+.+|||..+++...+++|++|+|.|
T Consensus 86 S~~~~~~~-GD~v~g~~g---Weeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSa 161 (343)
T KOG1196|consen 86 SGHPNYKK-GDLVWGIVG---WEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSA 161 (343)
T ss_pred cCCCCCCc-CceEEEecc---ceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEee
Confidence 45678999 999999886 99999998753 455544 333332 2336788999999999999999999999998
Q ss_pred C-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHH
Q 025336 78 L-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLL 155 (254)
Q Consensus 78 ~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~ 155 (254)
| |++|+++-|+||.+|| +|++...++||.++++. +|.+..+||.+ +.+..+++++..+. ++|+.||.+|+. .+
T Consensus 162 AsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~--e~~~~~aL~r~~P~-GIDiYfeNVGG~-~l 236 (343)
T KOG1196|consen 162 ASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE--ESDLSAALKRCFPE-GIDIYFENVGGK-ML 236 (343)
T ss_pred ccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC--ccCHHHHHHHhCCC-cceEEEeccCcH-HH
Confidence 6 9999999999999999 99999999999999865 69999999998 23788888886665 999999999998 78
Q ss_pred HHHHHHcccCCcEEEEEccCCC----ceeec-cHHHHHhCCCEEEeeecCCCCC--CCCHHHHHHHHhCCCCCCCCceEE
Q 025336 156 SEALETTKVGKGKVIVIGVGVD----TMVPL-NVIALACGGRTLKGTTFGGIKT--KSDLPILLDKCKNKEFKLHQLLTH 228 (254)
Q Consensus 156 ~~~~~~l~~~~G~~v~~g~~~~----~~~~~-~~~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 228 (254)
+..+..++.. ||++.||..+. .+..+ +...++.|++++.|+....+.. .+.++.+..++++|||+..+.+.
T Consensus 237 Davl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~- 314 (343)
T KOG1196|consen 237 DAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIA- 314 (343)
T ss_pred HHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHH-
Confidence 9999999998 99999997663 11121 2334566999999987655432 34567788899999988765543
Q ss_pred EeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 229 HVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
-.|++.++||.-|.+|++ +|.++.+
T Consensus 315 -~Glen~P~A~vglf~GkNvGKqiv~v 340 (343)
T KOG1196|consen 315 -DGLENGPSALVGLFHGKNVGKQLVKV 340 (343)
T ss_pred -HHHhccHHHHHHHhccCcccceEEEe
Confidence 369999999999999888 5888753
No 96
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.96 E-value=1.1e-26 Score=190.98 Aligned_cols=238 Identities=18% Similarity=0.222 Sum_probs=185.8
Q ss_pred CCcccccCCceeeeee------ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHH--hcCCCCCC-EEE
Q 025336 4 GTSRMSVRGQKLYHIF------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWK--EAEVEKGS-SVA 74 (254)
Q Consensus 4 ~~~~~~~~Gd~v~~~~------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~-~vl 74 (254)
++..|++ ||+|+... ..|+|++|+.+|+..++++|+++++++++.++..+.+|+.++.. ..++.+++ +|+
T Consensus 72 ~~~~~~~-Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vl 150 (323)
T TIGR02823 72 EDPRFRE-GDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVL 150 (323)
T ss_pred CCCCCCC-CCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEE
Confidence 3456889 99998653 35899999999999999999999999999999999999887643 23478898 999
Q ss_pred EEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChh
Q 025336 75 VLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS 153 (254)
Q Consensus 75 I~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~ 153 (254)
|+|+ |++|++++++|+.+|+ ++++++.++++.++++++|++.+++.++ .+. .+..+..+ ++|.++||+|+.
T Consensus 151 I~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~--~~~~~~~~-~~d~vld~~g~~- 222 (323)
T TIGR02823 151 VTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDRED---LSP--PGKPLEKE-RWAGAVDTVGGH- 222 (323)
T ss_pred EEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc---HHH--HHHHhcCC-CceEEEECccHH-
Confidence 9997 9999999999999999 7888888888889999999988887654 332 44455554 599999999987
Q ss_pred HHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCC---CCCHHHHHHHHhCCCCCCCCceEEEe
Q 025336 154 LLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPILLDKCKNKEFKLHQLLTHHV 230 (254)
Q Consensus 154 ~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (254)
.+..++++++++ |+++.+|.........+...++.++.++.+........ ...+..+.+++..+.++ +. .+.+
T Consensus 223 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~ 298 (323)
T TIGR02823 223 TLANVLAQLKYG-GAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLE--SI-TREI 298 (323)
T ss_pred HHHHHHHHhCCC-CEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCc--Cc-eeee
Confidence 689999999999 99999997644233344455546899998876432111 11245556666677643 33 4589
Q ss_pred ecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 231 KLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 231 ~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+++++++||+.+.+++. +|+|+++
T Consensus 299 ~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 299 TLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred cHHHHHHHHHHHhCCCccceEEEeC
Confidence 99999999999988776 4998864
No 97
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.96 E-value=1e-26 Score=192.46 Aligned_cols=236 Identities=21% Similarity=0.308 Sum_probs=188.4
Q ss_pred CCCCcccccCCceeeeeec--------cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCC------
Q 025336 2 LDGTSRMSVRGQKLYHIFS--------CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEV------ 67 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~--------~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~------ 67 (254)
|+++..|++ ||+|+++.. +|+|++|+++|...++++|+++++++++.+++++.|||+++....++
T Consensus 70 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~ 148 (339)
T cd08249 70 GSGVTRFKV-GDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPK 148 (339)
T ss_pred CCCcCcCCC-CCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCC
Confidence 667778999 999998642 48999999999999999999999999999999999999998665544
Q ss_pred ----CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCc
Q 025336 68 ----EKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGV 142 (254)
Q Consensus 68 ----~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~ 142 (254)
.++++|||+|+ |++|++++++++.+|+ +|+++. ++++.+.++++|+++++++++ .++.+.+++..+ +++
T Consensus 149 ~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~-~~~ 222 (339)
T cd08249 149 PSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHD---PDVVEDIRAATG-GKL 222 (339)
T ss_pred CCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCC---chHHHHHHHhcC-CCe
Confidence 78999999997 8999999999999999 888876 668999999999999998887 778888887776 489
Q ss_pred cEEEEcCCChhHHHHHHHHccc--CCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCC---------CCCCCHHHH
Q 025336 143 DYCFECTGVPSLLSEALETTKV--GKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGI---------KTKSDLPIL 211 (254)
Q Consensus 143 d~v~d~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---------~~~~~~~~~ 211 (254)
|+++|++|++..+..+++++++ + |+++.+|...... .+ ..+........... .....+..+
T Consensus 223 d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (339)
T cd08249 223 RYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET-EP------RKGVKVKFVLGYTVFGEIPEDREFGEVFWKYL 294 (339)
T ss_pred eEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc-cC------CCCceEEEEEeeeecccccccccchHHHHHHH
Confidence 9999999985588999999999 9 9999998765411 11 12222222211110 112346678
Q ss_pred HHHHhCCCCCCCCceEEEee--cccHHHHHHHHcCCC-e-eEEEEeC
Q 025336 212 LDKCKNKEFKLHQLLTHHVK--LEEIDKAIQLLKQPD-C-VKVLITI 254 (254)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~~~~~-~-~k~vi~~ 254 (254)
+++++++++.+. ....++ ++++++||+.+..++ . .|+|+++
T Consensus 295 ~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 295 PELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 889999987654 334567 999999999998877 5 5999875
No 98
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.96 E-value=6e-27 Score=193.11 Aligned_cols=240 Identities=23% Similarity=0.243 Sum_probs=193.0
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-CH
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GT 80 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 80 (254)
|+++..+++ ||+|++.. .|+|++|+.++...++++|+. +.+++.++.++.|||+++....+++++++|+|+|+ |.
T Consensus 76 G~~v~~~~~-Gd~V~~~~-~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ 151 (329)
T cd08250 76 GEGVTDFKV-GDAVATMS-FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGG 151 (329)
T ss_pred CCCCCCCCC-CCEEEEec-CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccH
Confidence 566677889 99999765 489999999999999999997 45677888999999999877788999999999985 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHH
Q 025336 81 VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 160 (254)
Q Consensus 81 ~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~ 160 (254)
+|++++|+++..|+ +|+++++++++.++++++|++.+++..+ .++...+.+..+ +++|+++|++|+. .+...++
T Consensus 152 ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~-~~vd~v~~~~g~~-~~~~~~~ 225 (329)
T cd08250 152 TGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKT---EDLGEVLKKEYP-KGVDVVYESVGGE-MFDTCVD 225 (329)
T ss_pred HHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCC---ccHHHHHHHhcC-CCCeEEEECCcHH-HHHHHHH
Confidence 99999999999999 8999989999999999999988887776 666667766654 5899999999975 7899999
Q ss_pred HcccCCcEEEEEccCCCc----------eeeccHHHHHhCCCEEEeeecCCCC--CCCCHHHHHHHHhCCCCCCCCceEE
Q 025336 161 TTKVGKGKVIVIGVGVDT----------MVPLNVIALACGGRTLKGTTFGGIK--TKSDLPILLDKCKNKEFKLHQLLTH 228 (254)
Q Consensus 161 ~l~~~~G~~v~~g~~~~~----------~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (254)
+++++ |+++.+|..... ...++. ..+.++.++.+.....+. ..+.+.++++++.++.++......+
T Consensus 226 ~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 303 (329)
T cd08250 226 NLALK-GRLIVIGFISGYQSGTGPSPVKGATLPP-KLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTR 303 (329)
T ss_pred HhccC-CeEEEEecccCCcccCcccccccccccH-HHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCcc
Confidence 99999 999999876431 012232 334588999887643221 1234677888999998665433445
Q ss_pred EeecccHHHHHHHHcCCCe-eEEEEe
Q 025336 229 HVKLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 229 ~~~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
.++++++++|++.+.++.. .|++++
T Consensus 304 ~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 304 FRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 6899999999999987766 488874
No 99
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.96 E-value=1.5e-26 Score=189.67 Aligned_cols=242 Identities=22% Similarity=0.303 Sum_probs=199.6
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-CH
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GT 80 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 80 (254)
|.++..+++ ||+|+++...|+|++|+.+++..++++|+++++.+++.++.++.++|.++.....+.++++++|+|+ |+
T Consensus 73 g~~~~~~~~-Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ 151 (323)
T cd05276 73 GPGVTGWKV-GDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASG 151 (323)
T ss_pred CCCCCCCCC-CCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcCh
Confidence 556667889 9999987656899999999999999999999999999999999999999877788999999999986 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHH
Q 025336 81 VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 160 (254)
Q Consensus 81 ~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~ 160 (254)
+|++++++++..|+ +++++++++++.+.++.+|.+.+++... .++...+.+...+.++|+++|++|+. .+...++
T Consensus 152 ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~ 226 (323)
T cd05276 152 VGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRT---EDFAEEVKEATGGRGVDVILDMVGGD-YLARNLR 226 (323)
T ss_pred HHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCc---hhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHH
Confidence 99999999999999 8999989989999998899888888776 67778888777767899999999987 5788999
Q ss_pred HcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCC-------CCCHHHHHHHHhCCCCCCCCceEEEeecc
Q 025336 161 TTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPILLDKCKNKEFKLHQLLTHHVKLE 233 (254)
Q Consensus 161 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (254)
+++++ |+++.+|.........+...++.+++++.++....... ...+.++++++.++++. +..++.|+++
T Consensus 227 ~~~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 303 (323)
T cd05276 227 ALAPD-GRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIR--PVIDKVFPLE 303 (323)
T ss_pred hhccC-CEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCcc--CCcceEEcHH
Confidence 99999 99999987654223445555556899999887543211 11245677888888854 4466789999
Q ss_pred cHHHHHHHHcCCCe-eEEEE
Q 025336 234 EIDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 234 ~~~~a~~~~~~~~~-~k~vi 252 (254)
+++++++.+.++.. .|+++
T Consensus 304 ~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 304 EAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHHHHHhCCCcceEeC
Confidence 99999999987665 47663
No 100
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.95 E-value=1.2e-26 Score=188.88 Aligned_cols=240 Identities=20% Similarity=0.277 Sum_probs=193.9
Q ss_pred CCCCcccccCCceeeeee--ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-
Q 025336 2 LDGTSRMSVRGQKLYHIF--SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL- 78 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~--~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~- 78 (254)
|+++.+|++ ||+|+++. ..|+|++|+.++++.++++|+++++++++.++.++.+||+++ ...+++++++++|+|+
T Consensus 53 G~~v~~~~~-Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~ 130 (303)
T cd08251 53 GPHVTRLAV-GDEVIAGTGESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTAT 130 (303)
T ss_pred CCCCCCCCC-CCEEEEecCCCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCC
Confidence 667778899 99998764 348999999999999999999999999999999999999998 5889999999999965
Q ss_pred CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHH
Q 025336 79 GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEA 158 (254)
Q Consensus 79 g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~ 158 (254)
|++|++++|+++.+|+ ++++++.++++.+.++++|++.+++... .++...+.+.+++.++|.++|++++. .....
T Consensus 131 ~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~ 205 (303)
T cd08251 131 GGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRGVDVVINTLSGE-AIQKG 205 (303)
T ss_pred cHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCCceEEEECCcHH-HHHHH
Confidence 9999999999999999 8999989999999999999998998876 77888888888877999999999875 78899
Q ss_pred HHHcccCCcEEEEEccCCC-ceeeccHHHHHhCCCEEEeeecCCCC--C----CCCHHHHHHHHhCCCCCCCCceEEEee
Q 025336 159 LETTKVGKGKVIVIGVGVD-TMVPLNVIALACGGRTLKGTTFGGIK--T----KSDLPILLDKCKNKEFKLHQLLTHHVK 231 (254)
Q Consensus 159 ~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (254)
+++++++ |+++.+|.... ....++...+. ++..+....+.... . .+.+.+++++++++.++ +..++.++
T Consensus 206 ~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~ 281 (303)
T cd08251 206 LNCLAPG-GRYVEIAMTALKSAPSVDLSVLS-NNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELR--PTVSRIFP 281 (303)
T ss_pred HHHhccC-cEEEEEeccCCCccCccChhHhh-cCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCcc--CCCceEEc
Confidence 9999999 99999987543 22233433333 45554443321111 1 23466788889999854 44567899
Q ss_pred cccHHHHHHHHcCCCe-eEEEE
Q 025336 232 LEEIDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 232 ~~~~~~a~~~~~~~~~-~k~vi 252 (254)
+++++++++.+.++.. +|+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 282 FDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHHHHHHhCCCcceEeC
Confidence 9999999999987766 47664
No 101
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.95 E-value=1.3e-26 Score=191.43 Aligned_cols=234 Identities=27% Similarity=0.374 Sum_probs=188.9
Q ss_pred CCCCcccccCCceeeeee---------------------------ccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLYHIF---------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|.++..+++ ||+|++.. ..|+|++|+.++...++++|+++++.+++.+++++
T Consensus 70 g~~~~~~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~ 148 (334)
T PRK13771 70 GENVKGFKP-GDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVT 148 (334)
T ss_pred CCCCccCCC-CCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchH
Confidence 556666888 99998653 14899999999999999999999999999999999
Q ss_pred hhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 55 TTGFGAAWKEAEVEKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 55 ~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
.+||+++... .++++++|+|+|+ |++|++++|+++..|+ +++++++++++.+.++++ ++.+++++ ++.+.+
T Consensus 149 ~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~v 220 (334)
T PRK13771 149 GMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-----KFSEEV 220 (334)
T ss_pred HHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-----hHHHHH
Confidence 9999998554 8899999999987 9999999999999999 899998999999999888 76666543 244455
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC-ceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHH
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 212 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 212 (254)
++. + ++|+++||+|+. .+..++++++++ |+++.+|.... ..+.........+++++.+... ...++++.++
T Consensus 221 ~~~--~-~~d~~ld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 292 (334)
T PRK13771 221 KKI--G-GADIVIETVGTP-TLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS---ATKRDVEEAL 292 (334)
T ss_pred Hhc--C-CCcEEEEcCChH-HHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC---CCHHHHHHHH
Confidence 554 3 799999999986 678999999999 99999997654 2212333333458888888642 2356688999
Q ss_pred HHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 213 DKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
++++++.++ +.+++.++++++++||+.+.++.. +|+++++
T Consensus 293 ~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 293 KLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 999999854 446788999999999999987665 5888763
No 102
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.95 E-value=1.8e-26 Score=186.26 Aligned_cols=240 Identities=20% Similarity=0.303 Sum_probs=194.7
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-CH
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GT 80 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 80 (254)
|+++..|++ ||+|++.. .|+|++|+.+|.+.++++|+++++++++.+++++.+++.++.....++++++|+|+|+ |.
T Consensus 39 G~~~~~~~~-Gd~V~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~ 116 (288)
T smart00829 39 GPGVTGLAV-GDRVMGLA-PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGG 116 (288)
T ss_pred CCCCcCCCC-CCEEEEEc-CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcH
Confidence 566778899 99999774 4899999999999999999999999999999999999999877888999999999985 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC--ceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHH
Q 025336 81 VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM--TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEA 158 (254)
Q Consensus 81 ~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~ 158 (254)
+|++++++++..|+ +|++++.++++.+.++++|+ +.++++.+ .++.+.+.+...++++|.++|++++. .+...
T Consensus 117 ~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~ 191 (288)
T smart00829 117 VGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLAGE-FLDAS 191 (288)
T ss_pred HHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHH
Confidence 99999999999999 89999889999999999998 77888776 67778888877777899999999965 78899
Q ss_pred HHHcccCCcEEEEEccCCC-ceeeccHHHHHhCCCEEEeeecCCCC-----CCCCHHHHHHHHhCCCCCCCCceEEEeec
Q 025336 159 LETTKVGKGKVIVIGVGVD-TMVPLNVIALACGGRTLKGTTFGGIK-----TKSDLPILLDKCKNKEFKLHQLLTHHVKL 232 (254)
Q Consensus 159 ~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (254)
+++++++ |+++.+|.... ....++...+ .+++++.+..+.... ....+.++++++.+++++. ...+.|++
T Consensus 192 ~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 267 (288)
T smart00829 192 LRCLAPG-GRFVEIGKRDIRDNSQLGMAPF-RRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP--LPVTVFPI 267 (288)
T ss_pred HHhccCC-cEEEEEcCcCCccccccchhhh-cCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC--cCceEEcH
Confidence 9999999 99999987643 2233343333 367777776532211 1123667888888888554 34567999
Q ss_pred ccHHHHHHHHcCCCe-eEEEE
Q 025336 233 EEIDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 233 ~~~~~a~~~~~~~~~-~k~vi 252 (254)
++++++++.+..+.. .|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 268 SDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred HHHHHHHHHHhcCCCcceEeC
Confidence 999999999987765 47653
No 103
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.95 E-value=4e-26 Score=187.40 Aligned_cols=243 Identities=21% Similarity=0.296 Sum_probs=198.2
Q ss_pred CCCCcccccCCceeeeee-----ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 025336 2 LDGTSRMSVRGQKLYHIF-----SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVL 76 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~-----~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~ 76 (254)
|+++..|++ ||+|+... ..|++++|+.+++..++++|+++++++++.+++++.+||+++....++.++++++|+
T Consensus 73 g~~~~~~~~-Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~ 151 (325)
T cd08253 73 GEGVDGLKV-GDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVH 151 (325)
T ss_pred CCCCCCCCC-CCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 567778999 99998764 258999999999999999999999999999999999999998777899999999999
Q ss_pred cC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHH
Q 025336 77 GL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLL 155 (254)
Q Consensus 77 G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~ 155 (254)
|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++... .++...+.+...++++|+++||+++. ..
T Consensus 152 g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~ 226 (325)
T cd08253 152 GGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRA---EDLADRILAATAGQGVDVIIEVLANV-NL 226 (325)
T ss_pred cCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---cCHHHHHHHHcCCCceEEEEECCchH-HH
Confidence 86 9999999999999999 8999999999999999999988888776 67777888777666899999999987 67
Q ss_pred HHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCC---CCCHHHHHHHHhCCCCCCCCceEEEeec
Q 025336 156 SEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPILLDKCKNKEFKLHQLLTHHVKL 232 (254)
Q Consensus 156 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (254)
...+++++++ |+++.++.... ..+++...++.++.++.+........ ...+..+.+++.++.++ +..++.+++
T Consensus 227 ~~~~~~l~~~-g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~ 302 (325)
T cd08253 227 AKDLDVLAPG-GRIVVYGSGGL-RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALR--PVIAREYPL 302 (325)
T ss_pred HHHHHhhCCC-CEEEEEeecCC-cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCcc--CccccEEcH
Confidence 8889999999 99999987542 33444445455788887765332110 12345566677788754 345678999
Q ss_pred ccHHHHHHHHcCCCe-eEEEEeC
Q 025336 233 EEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 233 ~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
++++++++.+.++.. +|+++++
T Consensus 303 ~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 303 EEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred HHHHHHHHHHHcCCCcceEEEeC
Confidence 999999999987666 5988864
No 104
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.95 E-value=2.8e-26 Score=184.71 Aligned_cols=231 Identities=26% Similarity=0.395 Sum_probs=183.4
Q ss_pred CCCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCH
Q 025336 1 MLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGT 80 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~ 80 (254)
+|+++.+|++ ||+|+++ ++|++|+++|...++++|+++++++++.+ .++++||+++ ...++++++++||+|+|+
T Consensus 35 vG~~v~~~~~-Gd~V~~~---~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~ 108 (277)
T cd08255 35 VGSGVTGFKP-GDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGL 108 (277)
T ss_pred eCCCCCCCCC-CCEEEec---CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCH
Confidence 3667778999 9999976 35999999999999999999999999888 8899999997 478999999999998899
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcC-CceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHH
Q 025336 81 VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFG-MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 159 (254)
Q Consensus 81 ~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~ 159 (254)
+|++++++|+.+|+.+|++++.++++.+.++++| ++.+++..+ ....+.++|.+|||++....+...+
T Consensus 109 vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~ 177 (277)
T cd08255 109 VGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETAL 177 (277)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHH
Confidence 9999999999999933999999999999999999 555554331 1124458999999998766889999
Q ss_pred HHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCC---------CCCCHHHHHHHHhCCCCCCCCceEEEe
Q 025336 160 ETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIK---------TKSDLPILLDKCKNKEFKLHQLLTHHV 230 (254)
Q Consensus 160 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (254)
++++++ |+++.+|..... .......+..+.+++.+....... ..+.+++++++++++.++ +.+.+.+
T Consensus 178 ~~l~~~-g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~~ 253 (277)
T cd08255 178 RLLRDR-GRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE--ALITHRV 253 (277)
T ss_pred HHhcCC-cEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcc--ccccCcc
Confidence 999999 999999876543 111223344466677776543221 125688999999999844 4456789
Q ss_pred ecccHHHHHHHHcCC--CeeEEEE
Q 025336 231 KLEEIDKAIQLLKQP--DCVKVLI 252 (254)
Q Consensus 231 ~~~~~~~a~~~~~~~--~~~k~vi 252 (254)
++++++++|+.+.++ ..+|+++
T Consensus 254 ~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 254 PFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred CHHHHHHHHHHHHcCCccceeeeC
Confidence 999999999999877 3368764
No 105
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.95 E-value=2.7e-26 Score=187.25 Aligned_cols=206 Identities=21% Similarity=0.353 Sum_probs=174.3
Q ss_pred CCCCcccccCCceeeeee----------------------------ccCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 2 LDGTSRMSVRGQKLYHIF----------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~----------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
|+++..|++ ||+|+... ..|+|++|+++++..++++|+++++++++ ++.+
T Consensus 71 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~ 148 (306)
T cd08258 71 GPDVEGWKV-GDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEP 148 (306)
T ss_pred CCCcCcCCC-CCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhch
Confidence 667778999 99998643 14899999999999999999999999887 6678
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcC--CcccHHHHHhcCCceEeCCCCCCCchHHH
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDK--NPWKKEKGEAFGMTDFINPDDEPNKSISE 131 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~--~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 131 (254)
++++|+++....+++++++|||.|+|.+|++++|+++.+|+ +|+++.. ++++.+.++++|++.+ +++. .++.+
T Consensus 149 ~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~---~~~~~ 223 (306)
T cd08258 149 LAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGGE---EDLAE 223 (306)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCCc---CCHHH
Confidence 88999998888899999999998889999999999999999 7877633 4457778889999888 7776 78888
Q ss_pred HHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHH
Q 025336 132 LVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPIL 211 (254)
Q Consensus 132 ~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 211 (254)
.+.+...++++|+++||+|+...+...+++++++ |+++.+|........++...++++++++.|++.++ .++++++
T Consensus 224 ~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~ 299 (306)
T cd08258 224 LVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST---PASWETA 299 (306)
T ss_pred HHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc---hHhHHHH
Confidence 8888777778999999998766888999999999 99999998754345566777778999999998653 5779999
Q ss_pred HHHHhCC
Q 025336 212 LDKCKNK 218 (254)
Q Consensus 212 ~~~~~~~ 218 (254)
++++++|
T Consensus 300 ~~~~~~~ 306 (306)
T cd08258 300 LRLLASG 306 (306)
T ss_pred HHHHhcC
Confidence 9998875
No 106
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.95 E-value=7.5e-26 Score=187.20 Aligned_cols=241 Identities=21% Similarity=0.307 Sum_probs=199.4
Q ss_pred CCCCcccccCCceeeeee---------------------------ccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLYHIF---------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|.++..|++ ||+|+... ..|+|++|+++++..++++|+.+++++++.++.++
T Consensus 73 G~~~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~ 151 (342)
T cd08266 73 GPGVTNVKP-GQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTF 151 (342)
T ss_pred CCCCCCCCC-CCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHH
Confidence 566667888 99997641 24789999999999999999999999999999999
Q ss_pred hhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 55 TTGFGAAWKEAEVEKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 55 ~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
.+|++++....++.++++++|+|+ +.+|++++++++..|+ +++.+++++++.+.++.++.+.+++..+ .+....+
T Consensus 152 ~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 227 (342)
T cd08266 152 LTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRK---EDFVREV 227 (342)
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecCC---hHHHHHH
Confidence 999999878888999999999987 7999999999999999 8999989988999888888877787765 6777777
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHH
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLD 213 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 213 (254)
.+...+.++|.++|+.|.. .+...+++++++ |+++.++.........+....+.++.++.+..... ...+.++++
T Consensus 228 ~~~~~~~~~d~~i~~~g~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 302 (342)
T cd08266 228 RELTGKRGVDVVVEHVGAA-TWEKSLKSLARG-GRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT---KAELDEALR 302 (342)
T ss_pred HHHhCCCCCcEEEECCcHH-HHHHHHHHhhcC-CEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC---HHHHHHHHH
Confidence 7776666899999999986 688999999999 99999987655223444444455888888876432 356888899
Q ss_pred HHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 214 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+++++.+. +.+++.|++++++++++.+.++.. .|+++++
T Consensus 303 ~l~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 303 LVFRGKLK--PVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred HHHcCCcc--cceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 99999844 457788999999999999887665 5998864
No 107
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.95 E-value=6.7e-26 Score=186.98 Aligned_cols=234 Identities=26% Similarity=0.409 Sum_probs=189.4
Q ss_pred CCCCcccccCCceeeeee---------------------------ccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLYHIF---------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|+++..+++ ||+|+++. ..|+|++|++++...++++|+++++++++.+++++
T Consensus 70 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~ 148 (332)
T cd08259 70 GEGVERFKP-GDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVV 148 (332)
T ss_pred CCCCccCCC-CCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHH
Confidence 566777889 99998764 14899999999999999999999999999999999
Q ss_pred hhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 55 TTGFGAAWKEAEVEKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 55 ~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
.+||+++.. ..+++++++||+|+ |++|++++++++..|. +|+++++++++.+.++++|.+.+++.. . +.+.+
T Consensus 149 ~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~ 221 (332)
T cd08259 149 GTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS----K-FSEDV 221 (332)
T ss_pred HHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH----H-HHHHH
Confidence 999999865 88999999999987 9999999999999999 899988888888989888987777543 2 55555
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHH
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLD 213 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 213 (254)
.+.. ++|+++|++|.. ....++++++++ |+++.+|........++......++..+.++.. .....++++++
T Consensus 222 ~~~~---~~d~v~~~~g~~-~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 293 (332)
T cd08259 222 KKLG---GADVVIELVGSP-TIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGLLILKEIRIIGSIS---ATKADVEEALK 293 (332)
T ss_pred Hhcc---CCCEEEECCChH-HHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecC---CCHHHHHHHHH
Confidence 5543 799999999987 578999999999 999999876542222233333347777777642 22456888999
Q ss_pred HHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEe
Q 025336 214 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
+++++.++ +.+++.+++++++++|+.+.++.. +|++++
T Consensus 294 ~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 294 LVKEGKIK--PVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHcCCCc--cceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 99999854 457788999999999999988766 588764
No 108
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.95 E-value=8.8e-26 Score=186.68 Aligned_cols=241 Identities=18% Similarity=0.195 Sum_probs=191.8
Q ss_pred CCCCcccccCCceeeeee---ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCC-----CCEE
Q 025336 2 LDGTSRMSVRGQKLYHIF---SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEK-----GSSV 73 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~v 73 (254)
|+++..|++ ||+|+... ..|+|++|+.++...++++|+++++++++.++..+.|||.++.....+.+ +++|
T Consensus 75 G~~v~~~~~-Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~v 153 (336)
T cd08252 75 GSEVTLFKV-GDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTL 153 (336)
T ss_pred CCCCCCCCC-CCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEE
Confidence 566777899 99998652 35899999999999999999999999999999999999999877788877 9999
Q ss_pred EEEcC-CHHHHHHHHHHHHcC-CCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCC
Q 025336 74 AVLGL-GTVGLGAVDGARMQG-AAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 151 (254)
Q Consensus 74 lI~G~-g~~G~~~~~~a~~~g-~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~ 151 (254)
+|+|+ |++|++++|+++.+| + +|++++.++++.++++++|++.++++. .++...+... .++++|+++||+++
T Consensus 154 lV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~i~~~-~~~~~d~vl~~~~~ 227 (336)
T cd08252 154 LIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHH----QDLAEQLEAL-GIEPVDYIFCLTDT 227 (336)
T ss_pred EEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC----ccHHHHHHhh-CCCCCCEEEEccCc
Confidence 99985 999999999999999 7 899999999999999999998888765 2455556544 33589999999997
Q ss_pred hhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCC--C-------CCCHHHHHHHHhCCCCCC
Q 025336 152 PSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIK--T-------KSDLPILLDKCKNKEFKL 222 (254)
Q Consensus 152 ~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~--~-------~~~~~~~~~~~~~~~~~~ 222 (254)
...+..++++++++ |+++.+|... ..++...+..++.++.+....... . ...+.++++++.++.++.
T Consensus 228 ~~~~~~~~~~l~~~-g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (336)
T cd08252 228 DQHWDAMAELIAPQ-GHICLIVDPQ---EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKT 303 (336)
T ss_pred HHHHHHHHHHhcCC-CEEEEecCCC---CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEec
Confidence 65889999999999 9999998653 233344444578888876543211 1 123677889999998664
Q ss_pred CCc-eEEEeecccHHHHHHHHcCCCe-eEEEEe
Q 025336 223 HQL-LTHHVKLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 223 ~~~-~~~~~~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
... ....+++++++++++.+.++.. .|++++
T Consensus 304 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 304 TLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred ceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 211 1234799999999999988776 488764
No 109
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.95 E-value=9.2e-26 Score=185.32 Aligned_cols=244 Identities=22% Similarity=0.320 Sum_probs=200.7
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-CH
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GT 80 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 80 (254)
|+.+..+++ ||+|+++...|+|++|+.++...++++|+++++.+++.++.++.++|+++.....++++++++|+|+ |+
T Consensus 73 g~~~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~ 151 (325)
T TIGR02824 73 GEGVSRWKV-GDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASG 151 (325)
T ss_pred CCCCCCCCC-CCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcch
Confidence 456667889 9999987555899999999999999999999999999999999999999878889999999999986 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHH
Q 025336 81 VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 160 (254)
Q Consensus 81 ~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~ 160 (254)
+|++++++++..|+ +|+++.+++++.+.++++|.+.+++... .++...+.+...++++|+++|++++. .+...++
T Consensus 152 ~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~ 226 (325)
T TIGR02824 152 IGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYRE---EDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIK 226 (325)
T ss_pred HHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCc---hhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHH
Confidence 99999999999999 8999988988888888899888887765 67777788777766899999999986 6788999
Q ss_pred HcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCC-------CCCHHHHHHHHhCCCCCCCCceEEEeecc
Q 025336 161 TTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPILLDKCKNKEFKLHQLLTHHVKLE 233 (254)
Q Consensus 161 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (254)
+++++ |+++.+|........++...++.+++++.+........ ...+.+++++++++.++ +..++.++++
T Consensus 227 ~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~ 303 (325)
T TIGR02824 227 ALALD-GRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVR--PVIDKVFPLE 303 (325)
T ss_pred hhccC-cEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCccc--CccccEEeHH
Confidence 99999 99999987654122555556656999999987543211 11235567788888854 4466789999
Q ss_pred cHHHHHHHHcCCCe-eEEEEeC
Q 025336 234 EIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 234 ~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+++++++.+.++.. .|+++++
T Consensus 304 ~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 304 DAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred HHHHHHHHHHhCCCcceEEEeC
Confidence 99999999887766 4888864
No 110
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.95 E-value=7e-26 Score=186.86 Aligned_cols=233 Identities=24% Similarity=0.379 Sum_probs=188.2
Q ss_pred CCCCcccccCCceeee----------------------------eeccCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 2 LDGTSRMSVRGQKLYH----------------------------IFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~----------------------------~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
|+++..|++ ||+|+. +...|+|++|+.+|+..++++|+++++++++.++..
T Consensus 69 g~~~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~ 147 (330)
T cd08245 69 GAGVEGRKV-GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCA 147 (330)
T ss_pred CCCCccccc-CCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhh
Confidence 556677888 999972 212489999999999999999999999999999999
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
+.|||+++. ..+++++++|||+|+|++|++++++++..|. +|+++++++++.++++++|++.+++... .+....
T Consensus 148 ~~ta~~~l~-~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~- 221 (330)
T cd08245 148 GITVYSALR-DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA---ELDEQA- 221 (330)
T ss_pred HHHHHHHHH-hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC---cchHHh-
Confidence 999999984 4789999999999988899999999999999 8999999999999999999988887654 333222
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHH
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLD 213 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 213 (254)
.. .++|+++|+++....+..++++++++ |+++.++.............+..++.++.+...+. ...++.+++
T Consensus 222 ---~~-~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 293 (330)
T cd08245 222 ---AA-GGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG---RADLQEALD 293 (330)
T ss_pred ---cc-CCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCCccccchHHHHhCCCEEEEeccCC---HHHHHHHHH
Confidence 22 37999999988766889999999999 99999987543222233445666888888876432 356788889
Q ss_pred HHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEE
Q 025336 214 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi 252 (254)
++.++.+.. ..+.+++++++++|+.+.++.. .|+|+
T Consensus 294 ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 294 FAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 999998653 3468999999999999987776 47664
No 111
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.95 E-value=5e-26 Score=183.88 Aligned_cols=240 Identities=20% Similarity=0.255 Sum_probs=194.7
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-CH
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GT 80 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 80 (254)
|+++.+|++ ||+|+++. .|+|++|+.++...++++|+.+++.+++.+++++.+++.++.....+++|++|+|+|+ |+
T Consensus 43 g~~~~~~~~-Gd~V~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~ 120 (293)
T cd05195 43 GSGVTGLKV-GDRVMGLA-PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGG 120 (293)
T ss_pred cCCccCCCC-CCEEEEEe-cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCH
Confidence 566777899 99999775 4899999999999999999999999999999999999999877788999999999975 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcC--CceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHH
Q 025336 81 VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFG--MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEA 158 (254)
Q Consensus 81 ~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g--~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~ 158 (254)
+|++++|+++..|+ ++++++.++++.+.++..+ ++.++++.+ .++.+.+.+.+.+.++|.++|++++. .+...
T Consensus 121 ~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~ 195 (293)
T cd05195 121 VGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVLNSLSGE-LLRAS 195 (293)
T ss_pred HHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEEeCCCch-HHHHH
Confidence 99999999999999 8999988888999998888 677888776 67888888888777899999999987 78999
Q ss_pred HHHcccCCcEEEEEccCCC-ceeeccHHHHHhCCCEEEeeecCCCC--C----CCCHHHHHHHHhCCCCCCCCceEEEee
Q 025336 159 LETTKVGKGKVIVIGVGVD-TMVPLNVIALACGGRTLKGTTFGGIK--T----KSDLPILLDKCKNKEFKLHQLLTHHVK 231 (254)
Q Consensus 159 ~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (254)
+++++++ |+++.+|.... ....+....+. ++..+.+..+.... . ...+.++++++.+++++ +..++.++
T Consensus 196 ~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 271 (293)
T cd05195 196 WRCLAPF-GRFVEIGKRDILSNSKLGMRPFL-RNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVVP 271 (293)
T ss_pred HHhcccC-ceEEEeeccccccCCccchhhhc-cCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeeec
Confidence 9999999 99999987654 21223333332 56666665432211 1 22467788888899854 55567799
Q ss_pred cccHHHHHHHHcCCCe-eEEEE
Q 025336 232 LEEIDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 232 ~~~~~~a~~~~~~~~~-~k~vi 252 (254)
+++++++++.+.++.. .|+++
T Consensus 272 ~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 272 SASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred hhhHHHHHHHHhcCCCCceecC
Confidence 9999999999987766 47663
No 112
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.95 E-value=4.4e-26 Score=187.94 Aligned_cols=233 Identities=23% Similarity=0.268 Sum_probs=188.5
Q ss_pred ccccCCceeeeeeccCcceeeEEecC-CceEEcCCCCC--cccccc-ccchhhhhhHHHHHhcCCCCCCEEEEEcC-CHH
Q 025336 7 RMSVRGQKLYHIFSCSTWSEYMVIDA-NYVVRVDPSID--LSHASF-LSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GTV 81 (254)
Q Consensus 7 ~~~~~Gd~v~~~~~~g~~a~~~~v~~-~~v~~~p~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~ 81 (254)
.|++ ||+|+++ ++|++|+.++. ..++++|++++ +.+++. +++++.|||+++.....+.++++|||+|+ |++
T Consensus 83 ~~~~-Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~i 158 (329)
T cd05288 83 DFKV-GDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAV 158 (329)
T ss_pred CCCC-CCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchH
Confidence 5788 9999865 47999999999 99999999985 445545 88999999999877788999999999985 999
Q ss_pred HHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHH
Q 025336 82 GLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 160 (254)
Q Consensus 82 G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~ 160 (254)
|++++|+++..|+ +|+++++++++.+.+++ +|++.++++++ .++...+.+..+ +++|+++||+|+. .+..+++
T Consensus 159 g~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~v~~~~~-~~~d~vi~~~g~~-~~~~~~~ 232 (329)
T cd05288 159 GSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT---PDLAEALKEAAP-DGIDVYFDNVGGE-ILDAALT 232 (329)
T ss_pred HHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC---hhHHHHHHHhcc-CCceEEEEcchHH-HHHHHHH
Confidence 9999999999999 89999899999999988 99999998886 677778887775 5899999999986 7899999
Q ss_pred HcccCCcEEEEEccCCC-cee----eccHHHHHhCCCEEEeeecCCCCC--CCCHHHHHHHHhCCCCCCCCceEEEeecc
Q 025336 161 TTKVGKGKVIVIGVGVD-TMV----PLNVIALACGGRTLKGTTFGGIKT--KSDLPILLDKCKNKEFKLHQLLTHHVKLE 233 (254)
Q Consensus 161 ~l~~~~G~~v~~g~~~~-~~~----~~~~~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (254)
+++++ |+++.+|.... ... .++...++.++.++.+........ .+.+.++++++.++.++..+ ...++++
T Consensus 233 ~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~ 309 (329)
T cd05288 233 LLNKG-GRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLE 309 (329)
T ss_pred hcCCC-ceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHH
Confidence 99999 99999987654 111 123444556889998876443211 23467788999999876553 3458999
Q ss_pred cHHHHHHHHcCCCe-eEEEE
Q 025336 234 EIDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 234 ~~~~a~~~~~~~~~-~k~vi 252 (254)
+++++++.+.+++. .|+++
T Consensus 310 ~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 310 NAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHHHHhcCCCccceeC
Confidence 99999999987765 47664
No 113
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.95 E-value=1.4e-25 Score=184.94 Aligned_cols=227 Identities=24% Similarity=0.303 Sum_probs=184.6
Q ss_pred CCCCcccccCCceeeee----------------------------eccCcceeeEEecCCceEEcCCCCCccccccccch
Q 025336 2 LDGTSRMSVRGQKLYHI----------------------------FSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCG 53 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~----------------------------~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~ 53 (254)
|.++..|++ ||+|+.. ...|+|++|+.++...++++|+++++.+++.++++
T Consensus 74 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~ 152 (329)
T cd08298 74 GPGVTRFSV-GDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCA 152 (329)
T ss_pred CCCCCCCcC-CCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhh
Confidence 556667888 9999641 12488999999999999999999999999999999
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
+.|||+++ ...++++++++||+|+|++|++++++++..|. +|++++.++++.+.++++|++.+++.+. .
T Consensus 153 ~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~------ 221 (329)
T cd08298 153 GIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDD---L------ 221 (329)
T ss_pred hHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCc---c------
Confidence 99999998 88999999999999999999999999999999 8999999999999999999988887654 1
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHH
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLD 213 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 213 (254)
.++++|.++++.+....++.++++++++ |+++.+|........+++.. +.++..+.++... ....+..+++
T Consensus 222 ----~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~---~~~~~~~~~~ 292 (329)
T cd08298 222 ----PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANL---TRQDGEEFLK 292 (329)
T ss_pred ----CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCCCCCccchhh-hhCceEEEEecCC---CHHHHHHHHH
Confidence 2347999999877666889999999999 99999885432222333333 3367777776522 2356888899
Q ss_pred HHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEE
Q 025336 214 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi 252 (254)
+++++.++. . .+.|+++++++|++.+.+++. +|+|+
T Consensus 293 l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 293 LAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred HHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 999998654 3 578999999999999988766 47764
No 114
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.94 E-value=2.8e-25 Score=184.90 Aligned_cols=243 Identities=19% Similarity=0.212 Sum_probs=180.0
Q ss_pred CCCCc-ccccCCceeeeee-----ccCcceeeEEecCC----ceEEcCCCCCccccccccchhhhhhHHHHHhc-CCCCC
Q 025336 2 LDGTS-RMSVRGQKLYHIF-----SCSTWSEYMVIDAN----YVVRVDPSIDLSHASFLSCGFTTGFGAAWKEA-EVEKG 70 (254)
Q Consensus 2 g~~~~-~~~~~Gd~v~~~~-----~~g~~a~~~~v~~~----~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~~ 70 (254)
|.++. +|++ ||+|.++. +.|+|++|+++++. .++++|+++++++++.++.++.|||+++.... ++++|
T Consensus 74 G~~v~~~~~~-Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g 152 (352)
T cd08247 74 GSNVASEWKV-GDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPD 152 (352)
T ss_pred CcccccCCCC-CCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCC
Confidence 66776 8999 99998764 25899999999987 78999999999999999999999999986666 79999
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHhcCCceEeCCCCCCCch---HHHHH-HHhhCCCCccE
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKS---ISELV-KGITHGMGVDY 144 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~~~i-~~~~~~~~~d~ 144 (254)
++|+|+|+ |.+|++++|+|+.+|. .+++++ .++++.+.++++|++.++++++ .+ +...+ +..++++++|.
T Consensus 153 ~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~-~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~ 228 (352)
T cd08247 153 SKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFIDYDA---HSGVKLLKPVLENVKGQGKFDL 228 (352)
T ss_pred CeEEEECCCchHHHHHHHHHHhcCCcceEEEE-eChhHHHHHHHhCCCEEEecCC---CcccchHHHHHHhhcCCCCceE
Confidence 99999987 7999999999998854 256666 4556667888899998888765 44 44444 34443568999
Q ss_pred EEEcCCChhHHHHHHHHcc---cCCcEEEEEccCCCceee-----------ccHHHHH----hCCCEEEeeecCCCCCCC
Q 025336 145 CFECTGVPSLLSEALETTK---VGKGKVIVIGVGVDTMVP-----------LNVIALA----CGGRTLKGTTFGGIKTKS 206 (254)
Q Consensus 145 v~d~~g~~~~~~~~~~~l~---~~~G~~v~~g~~~~~~~~-----------~~~~~~~----~~~~~i~g~~~~~~~~~~ 206 (254)
++||+|+......++++++ ++ |+++.++........ .....+. .+...+...... ...+
T Consensus 229 vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 305 (352)
T cd08247 229 ILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLD--PNAD 305 (352)
T ss_pred EEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEec--CCHH
Confidence 9999998557889999999 99 999987532211111 1111111 122222221111 1124
Q ss_pred CHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 207 DLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
.++++++++.++.++ +.+++.+++++++++|+.+.++.. +|+++++
T Consensus 306 ~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 306 WIEKCAELIADGKVK--PPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred HHHHHHHHHhCCCeE--eeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 577888999999854 446678999999999999987766 5998864
No 115
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=2e-25 Score=183.53 Aligned_cols=238 Identities=24% Similarity=0.291 Sum_probs=193.8
Q ss_pred CCCCcccccCCceeeeee-----ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 025336 2 LDGTSRMSVRGQKLYHIF-----SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVL 76 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~-----~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~ 76 (254)
|+++..|++ ||+|+++. ..|+|++|+.++...++++|+.+++.+++.++..+.+||+++....+++++++++|+
T Consensus 73 G~~~~~~~~-Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~ 151 (326)
T cd08272 73 GEGVTRFRV-GDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIH 151 (326)
T ss_pred CCCCCCCCC-CCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 566677899 99999764 258999999999999999999999999999999999999998788999999999999
Q ss_pred cC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHH
Q 025336 77 GL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLL 155 (254)
Q Consensus 77 G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~ 155 (254)
|+ |++|++++++++..|+ +|++++.+ ++.++++++|.+.+++... . +.+.+.+.+++.++|+++||+++. .+
T Consensus 152 g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~-~~ 224 (326)
T cd08272 152 GGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE---T-VVEYVAEHTGGRGFDVVFDTVGGE-TL 224 (326)
T ss_pred cCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch---h-HHHHHHHhcCCCCCcEEEECCChH-HH
Confidence 85 9999999999999999 89998888 8899999999988888765 5 777888888777899999999986 67
Q ss_pred HHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCC--CC------CCCCHHHHHHHHhCCCCCCCCceE
Q 025336 156 SEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGG--IK------TKSDLPILLDKCKNKEFKLHQLLT 227 (254)
Q Consensus 156 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~ 227 (254)
...+++++++ |+++.++... ..++. ....+++++.+..... .. ....+..+++++.++.++ +.++
T Consensus 225 ~~~~~~l~~~-g~~v~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~ 297 (326)
T cd08272 225 DASFEAVALY-GRVVSILGGA--THDLA--PLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLR--PLLD 297 (326)
T ss_pred HHHHHHhccC-CEEEEEecCC--ccchh--hHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcc--cccc
Confidence 8899999999 9999998653 12222 2224788887765322 10 123467788888888854 3333
Q ss_pred -EEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 228 -HHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 228 -~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+.+++++++++|+.+.++.. .|+++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 298 PRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred cceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 78999999999999877665 5988864
No 116
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.94 E-value=4.1e-25 Score=181.23 Aligned_cols=243 Identities=25% Similarity=0.392 Sum_probs=198.9
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-CH
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GT 80 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 80 (254)
|+++..+++ ||+|+++...|++++|+.++...++++|+++++.+++.++.++.+|+.++.....++++++|+|+|+ |+
T Consensus 73 g~~~~~~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~ 151 (323)
T cd08241 73 GEGVTGFKV-GDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGG 151 (323)
T ss_pred CCCCCCCCC-CCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCch
Confidence 556667889 9999987645899999999999999999999999988888999999999877788999999999997 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHH
Q 025336 81 VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 160 (254)
Q Consensus 81 ~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~ 160 (254)
+|++++++++..|+ +|++++.++++.++++++|++.+++... .++.+.+.+.+.+.++|.++||+|+. .+..+++
T Consensus 152 ~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~ 226 (323)
T cd08241 152 VGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYRD---PDLRERVKALTGGRGVDVVYDPVGGD-VFEASLR 226 (323)
T ss_pred HHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecCC---ccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHH
Confidence 99999999999999 8999989999999999999888887776 67888888887777899999999985 7788999
Q ss_pred HcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCC------CCCHHHHHHHHhCCCCCCCCceEEEeeccc
Q 025336 161 TTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKT------KSDLPILLDKCKNKEFKLHQLLTHHVKLEE 234 (254)
Q Consensus 161 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (254)
+++++ |+++.+|........+.......+++++.+.....+.. ...+.++++++.++.+. +..++.|++++
T Consensus 227 ~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 303 (323)
T cd08241 227 SLAWG-GRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR--PHVSAVFPLEQ 303 (323)
T ss_pred hhccC-CEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcc--cccceEEcHHH
Confidence 99999 99999987543111233333445889998876543321 13466788889898854 44667899999
Q ss_pred HHHHHHHHcCCCe-eEEEEe
Q 025336 235 IDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 235 ~~~a~~~~~~~~~-~k~vi~ 253 (254)
+.++++.+.++.. .|++++
T Consensus 304 ~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 304 AAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHHHHHhCCCCCcEEeC
Confidence 9999998877665 487764
No 117
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.94 E-value=5.1e-25 Score=181.27 Aligned_cols=238 Identities=17% Similarity=0.225 Sum_probs=185.0
Q ss_pred CCcccccCCceeeeee------ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHH--HhcCCC-CCCEEE
Q 025336 4 GTSRMSVRGQKLYHIF------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAW--KEAEVE-KGSSVA 74 (254)
Q Consensus 4 ~~~~~~~~Gd~v~~~~------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~-~~~~vl 74 (254)
++..+++ ||+|+... ..|+|++|++++...++++|+++++++++.++..+++++.++. ...+.. ++++|+
T Consensus 73 ~~~~~~~-Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vl 151 (324)
T cd08288 73 SSPRFKP-GDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVL 151 (324)
T ss_pred CCCCCCC-CCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEE
Confidence 4456788 99998752 2589999999999999999999999999999999999987753 123445 578999
Q ss_pred EEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChh
Q 025336 75 VLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS 153 (254)
Q Consensus 75 I~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~ 153 (254)
|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|++.++++++ . ...+..+..+ ++|.++|+++++
T Consensus 152 I~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~--~~~~~~~~~~-~~~~~~d~~~~~- 223 (324)
T cd08288 152 VTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE---L--SEPGRPLQKE-RWAGAVDTVGGH- 223 (324)
T ss_pred EECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch---h--hHhhhhhccC-cccEEEECCcHH-
Confidence 9987 9999999999999999 8999989999999999999999988764 2 2245555544 689999999985
Q ss_pred HHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCC---CCCHHHHHHHHhCCCCCCCCceEEEe
Q 025336 154 LLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPILLDKCKNKEFKLHQLLTHHV 230 (254)
Q Consensus 154 ~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (254)
.+...+..++.+ |+++.+|.......+.+...++.++.++.+........ .+.+..+.+++.++.++ + +.+.+
T Consensus 224 ~~~~~~~~~~~~-g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-i~~~~ 299 (324)
T cd08288 224 TLANVLAQTRYG-GAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLE--A-LTREI 299 (324)
T ss_pred HHHHHHHHhcCC-CEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcc--c-cceee
Confidence 677888899998 99999987533222344445546899999875332211 22355667777788753 3 35789
Q ss_pred ecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 231 KLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 231 ~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
++++++++|+.+.+++. .|+++++
T Consensus 300 ~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 300 PLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred cHHHHHHHHHHHhcCCccCeEEEeC
Confidence 99999999999988777 4988874
No 118
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=4.7e-25 Score=181.36 Aligned_cols=244 Identities=24% Similarity=0.366 Sum_probs=196.4
Q ss_pred CCCCcccccCCceeeeee-----ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 025336 2 LDGTSRMSVRGQKLYHIF-----SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVL 76 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~-----~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~ 76 (254)
|+++..|++ ||+|+++. ..|++++|+.++.+.++++|+++++++++.++.++.++|.++.....+.++++++|+
T Consensus 73 G~~~~~~~~-Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~ 151 (328)
T cd08268 73 GAGVTGFAV-GDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLIT 151 (328)
T ss_pred CCCCCcCCC-CCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 667778899 99998763 248999999999999999999999999999999999999998778889999999999
Q ss_pred cC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHH
Q 025336 77 GL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLL 155 (254)
Q Consensus 77 G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~ 155 (254)
|+ |++|++++++++..|+ +++.++.+.++.+.++++|.+.+++.+. .+....+.+...+.++|+++|+.++. ..
T Consensus 152 g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~ 226 (328)
T cd08268 152 AASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE---EDLVAEVLRITGGKGVDVVFDPVGGP-QF 226 (328)
T ss_pred cCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHhCCCCceEEEECCchH-hH
Confidence 87 9999999999999999 8999989999999998899888888776 67777787777766899999999985 77
Q ss_pred HHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCC-CCC----CHHHHHHHHhCCCCCCCCceEEEe
Q 025336 156 SEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIK-TKS----DLPILLDKCKNKEFKLHQLLTHHV 230 (254)
Q Consensus 156 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 230 (254)
..++++++++ |+++.+|........++....+.++..+.+....... ... .+..+.+++.++.+. +..+..|
T Consensus 227 ~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 303 (328)
T cd08268 227 AKLADALAPG-GTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALK--PVVDRVF 303 (328)
T ss_pred HHHHHhhccC-CEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCc--CCcccEE
Confidence 8999999999 9999998754322334444345588888887644211 112 234455566677744 3355679
Q ss_pred ecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 231 KLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 231 ~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
++++++++++.+.++.. .|+++++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 304 PFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred cHHHHHHHHHHHHcCCCCceEEEeC
Confidence 99999999999987766 4888864
No 119
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.94 E-value=2.7e-25 Score=182.99 Aligned_cols=226 Identities=25% Similarity=0.346 Sum_probs=182.4
Q ss_pred CCCCcccccCCceeeeee---------------------------ccCcceeeEEecCCceEEcCCCCCccccccccchh
Q 025336 2 LDGTSRMSVRGQKLYHIF---------------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGF 54 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---------------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 54 (254)
|+++..|++ ||+|+... ..|+|++|+++++..++++|+++++++++.++.++
T Consensus 70 G~~v~~~~~-Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~ 148 (325)
T cd08264 70 GDHVKGVKK-GDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAA 148 (325)
T ss_pred CCCCCCCCC-CCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhh
Confidence 667777889 99997541 24899999999999999999999999999999999
Q ss_pred hhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 55 TTGFGAAWKEAEVEKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 55 ~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
.+||+++. ..+++++++|+|+|+ |++|++++++|+.+|. +|++++ +.+.++++|++++++.++ ..+.+
T Consensus 149 ~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~~-----~~~~l 217 (325)
T cd08264 149 LTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYDE-----VEEKV 217 (325)
T ss_pred HHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecchH-----HHHHH
Confidence 99999985 588999999999997 9999999999999999 788875 236778899988887653 24556
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHH
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLD 213 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 213 (254)
.+++ +++|+++|++|+. .+...+++++++ |+++.+|........++...+..++.++.+...+ ..+.++++++
T Consensus 218 ~~~~--~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 290 (325)
T cd08264 218 KEIT--KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGG---TRKELLELVK 290 (325)
T ss_pred HHHh--CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecCCCCCCccCHHHHhhcCcEEEEccCC---CHHHHHHHHH
Confidence 6666 4899999999985 889999999999 9999998753323556666666688888887533 2456888898
Q ss_pred HHhCCCCCCCCceEEEeecccHHHHHHHHcCCCee-EE
Q 025336 214 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KV 250 (254)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~ 250 (254)
++...+ ..+.+.|+++++++||+.+.++... |+
T Consensus 291 l~~~~~----~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 291 IAKDLK----VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHcCC----ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 885433 2356789999999999998876553 53
No 120
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.94 E-value=6.3e-25 Score=175.94 Aligned_cols=203 Identities=27% Similarity=0.399 Sum_probs=168.4
Q ss_pred CCCCcccccCCceeeeee-----------------------ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhh
Q 025336 2 LDGTSRMSVRGQKLYHIF-----------------------SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGF 58 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~-----------------------~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~ 58 (254)
|.++..|++ ||+|++.. ..|+|++|+.+|+..++++|+++++++++.++.++.+||
T Consensus 45 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~ 123 (271)
T cd05188 45 GPGVTGVKV-GDRVVVLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAY 123 (271)
T ss_pred CCCCCcCCC-CCEEEEcCCCCCCCCHHHHhhCCCCCEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHH
Confidence 566778999 99998754 258999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhC
Q 025336 59 GAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 59 ~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
+++.....++++++|||+|+|++|++++++++..|. +|+++++++++.+.++++|++.++++.+ .+..+.+. ...
T Consensus 124 ~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~ 198 (271)
T cd05188 124 HALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTG 198 (271)
T ss_pred HHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-Hhc
Confidence 998777777899999999986699999999999998 9999999999999999999888888776 66666666 555
Q ss_pred CCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHH
Q 025336 139 GMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDK 214 (254)
Q Consensus 139 ~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 214 (254)
+.++|+++|+++....+..++++++++ |+++.++..............+.+++++.++.... ..++++++++
T Consensus 199 ~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 270 (271)
T cd05188 199 GGGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT---REDFEEALDL 270 (271)
T ss_pred CCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC---HHHHHHHHhh
Confidence 568999999999844789999999999 99999998765222222345566999999987543 3456666665
No 121
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=7.7e-25 Score=180.03 Aligned_cols=239 Identities=23% Similarity=0.328 Sum_probs=187.8
Q ss_pred CCCCcccccCCceeeeee---ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC
Q 025336 2 LDGTSRMSVRGQKLYHIF---SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL 78 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~ 78 (254)
|+++..+++ ||+|++.. ..|+|++|+.+++..++++|+++++.+++.+++++.+|++++.....++++++++|+|+
T Consensus 72 G~~~~~~~~-Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~ 150 (325)
T cd08271 72 GAKVTGWKV-GDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGG 150 (325)
T ss_pred CCCCCcCCC-CCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 566677889 99999764 25899999999999999999999999999999999999999877888999999999997
Q ss_pred -CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHH
Q 025336 79 -GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSE 157 (254)
Q Consensus 79 -g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~ 157 (254)
|++|++++++++..|+ +|+++. ++++.+.++.+|++.+++... .++...+.+...++++|.++||+++. ....
T Consensus 151 ~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~ 224 (325)
T cd08271 151 AGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYND---EDVCERIKEITGGRGVDAVLDTVGGE-TAAA 224 (325)
T ss_pred ccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCCC---ccHHHHHHHHcCCCCCcEEEECCCcH-hHHH
Confidence 8999999999999999 788775 677888888899988888776 67777788877777899999999987 5577
Q ss_pred HHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCC----------CCCCHHHHHHHHhCCCCCCCCceE
Q 025336 158 ALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIK----------TKSDLPILLDKCKNKEFKLHQLLT 227 (254)
Q Consensus 158 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 227 (254)
.+++++++ |+++.++...... . ...+ .+++.+....+.... ..+.+.++++++.++.++ +...
T Consensus 225 ~~~~l~~~-G~~v~~~~~~~~~-~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~ 297 (325)
T cd08271 225 LAPTLAFN-GHLVCIQGRPDAS-P--DPPF-TRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLE--PLVI 297 (325)
T ss_pred HHHhhccC-CEEEEEcCCCCCc-c--hhHH-hhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCee--eccc
Confidence 89999999 9999987553311 1 1111 133443333221110 012356688888888854 3345
Q ss_pred EEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 228 HHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 228 ~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
+.++++++.++++.+.++.. .|+++++
T Consensus 298 ~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 298 EVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred eEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 78999999999999987766 4988864
No 122
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=4.9e-24 Score=176.11 Aligned_cols=242 Identities=21% Similarity=0.291 Sum_probs=192.2
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-CH
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GT 80 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 80 (254)
|.++.++++ ||+|+++...|+|++|+.++...++++|+.+++++++.++.++.++|+++.....++++++|+|+|+ |+
T Consensus 72 g~~~~~~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~ 150 (337)
T cd08275 72 GEGVKDFKV-GDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGG 150 (337)
T ss_pred CCCCcCCCC-CCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcch
Confidence 566778899 9999987656899999999999999999999999999999999999999878889999999999997 99
Q ss_pred HHHHHHHHHHHc-CCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHH
Q 025336 81 VGLGAVDGARMQ-GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 159 (254)
Q Consensus 81 ~G~~~~~~a~~~-g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~ 159 (254)
+|++++++++.. +. .++.. ..+++.++++.+|++.+++... .++...+++.++ .++|+++||+|+. ....++
T Consensus 151 ~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~-~~~d~v~~~~g~~-~~~~~~ 223 (337)
T cd08275 151 VGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDYRT---QDYVEEVKKISP-EGVDIVLDALGGE-DTRKSY 223 (337)
T ss_pred HHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeCCC---CcHHHHHHHHhC-CCceEEEECCcHH-HHHHHH
Confidence 999999999988 33 33222 2345788888899988888776 777788887775 5899999999986 678999
Q ss_pred HHcccCCcEEEEEccCCC-ce---------------eeccHHHHHhCCCEEEeeecCCCCC-C----CCHHHHHHHHhCC
Q 025336 160 ETTKVGKGKVIVIGVGVD-TM---------------VPLNVIALACGGRTLKGTTFGGIKT-K----SDLPILLDKCKNK 218 (254)
Q Consensus 160 ~~l~~~~G~~v~~g~~~~-~~---------------~~~~~~~~~~~~~~i~g~~~~~~~~-~----~~~~~~~~~~~~~ 218 (254)
++++++ |+++.+|.... .. ..+.+..++.++.++.+........ . ..+.++++++.++
T Consensus 224 ~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (337)
T cd08275 224 DLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEG 302 (337)
T ss_pred HhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCC
Confidence 999999 99999986543 11 1222234556888988886542211 1 2356788888898
Q ss_pred CCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEeC
Q 025336 219 EFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 254 (254)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~~ 254 (254)
.++ +..++.|++++++++++.+.++.. .|+++++
T Consensus 303 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 303 KIK--PKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred CCC--CceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 854 445678999999999999887766 5998875
No 123
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=1.5e-24 Score=179.03 Aligned_cols=237 Identities=23% Similarity=0.314 Sum_probs=181.2
Q ss_pred CCCCcccccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-CH
Q 025336 2 LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GT 80 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 80 (254)
|+++..|++ ||+|++....|+|++|+.++...++++|+++++++++.++.++.+||+++.....+.++++|+|+|+ |+
T Consensus 73 G~~v~~~~~-Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ 151 (331)
T cd08273 73 GSGVTGFEV-GDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGG 151 (331)
T ss_pred CCCCccCCC-CCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcH
Confidence 667778999 9999987545899999999999999999999999999999999999999877788999999999986 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHH
Q 025336 81 VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 160 (254)
Q Consensus 81 ~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~ 160 (254)
+|++++++++..|+ +|++++. +++.+.++++|+.. ++... .++... +..+ +++|.++||+++. .+..+++
T Consensus 152 ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~~---~~~~~~--~~~~-~~~d~vl~~~~~~-~~~~~~~ 221 (331)
T cd08273 152 VGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYRT---KDWLPA--MLTP-GGVDVVFDGVGGE-SYEESYA 221 (331)
T ss_pred HHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCCC---cchhhh--hccC-CCceEEEECCchH-HHHHHHH
Confidence 99999999999999 8888876 88888888899754 45443 444333 3333 3899999999987 4889999
Q ss_pred HcccCCcEEEEEccCCC-ceee--ccHH----------HHHhCCCEEEeeecCCCC------CCCCHHHHHHHHhCCCCC
Q 025336 161 TTKVGKGKVIVIGVGVD-TMVP--LNVI----------ALACGGRTLKGTTFGGIK------TKSDLPILLDKCKNKEFK 221 (254)
Q Consensus 161 ~l~~~~G~~v~~g~~~~-~~~~--~~~~----------~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~ 221 (254)
+++++ |+++.+|.... .... +++. ........+.+....... ..+.+.+++++++++.++
T Consensus 222 ~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~ 300 (331)
T cd08273 222 ALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIR 300 (331)
T ss_pred HhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCcc
Confidence 99999 99999987654 1111 1110 011122233332221111 124577888999999854
Q ss_pred CCCceEEEeecccHHHHHHHHcCCCe-eEEEE
Q 025336 222 LHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 222 ~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi 252 (254)
+.+.+.+++++++++|+.+.++.. +|+|+
T Consensus 301 --~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 301 --PKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred --CCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 446678999999999999887666 47765
No 124
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.93 E-value=7.9e-25 Score=182.00 Aligned_cols=237 Identities=20% Similarity=0.231 Sum_probs=180.1
Q ss_pred CCCCcccccCCceeeeee---ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCC----CCEEE
Q 025336 2 LDGTSRMSVRGQKLYHIF---SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEK----GSSVA 74 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----~~~vl 74 (254)
|.++..+++ ||+|++.. ..|+|++|+.+++..++++|+++++++++.+++++.|||+++.....+.+ |++|+
T Consensus 89 G~~v~~~~~-Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vl 167 (350)
T cd08248 89 GSGVKSFEI-GDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVL 167 (350)
T ss_pred CCCcccCCC-CCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEE
Confidence 566778899 99998764 35899999999999999999999999999999999999999877777654 99999
Q ss_pred EEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChh
Q 025336 75 VLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS 153 (254)
Q Consensus 75 I~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~ 153 (254)
|+|+ |++|++++++++.+|+ +|+++..+ ++.+.++++|.+.+++..+ .++...+.. ..++|+++|++|++
T Consensus 168 I~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~---~~~vd~vi~~~g~~- 238 (350)
T cd08248 168 ILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGADDVIDYNN---EDFEEELTE---RGKFDVILDTVGGD- 238 (350)
T ss_pred EECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCCceEEECCC---hhHHHHHHh---cCCCCEEEECCChH-
Confidence 9985 9999999999999999 88887654 6777888999988888765 555555443 34899999999987
Q ss_pred HHHHHHHHcccCCcEEEEEccCCC---ceeec--cH----HHHHh-------CCCEEEeeecCCCCCCCCHHHHHHHHhC
Q 025336 154 LLSEALETTKVGKGKVIVIGVGVD---TMVPL--NV----IALAC-------GGRTLKGTTFGGIKTKSDLPILLDKCKN 217 (254)
Q Consensus 154 ~~~~~~~~l~~~~G~~v~~g~~~~---~~~~~--~~----~~~~~-------~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 217 (254)
....++++++++ |+++.+|.... ..... .. ..+.. +...+..... ......+.++++++.+
T Consensus 239 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 315 (350)
T cd08248 239 TEKWALKLLKKG-GTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFF--SPSGSALDELAKLVED 315 (350)
T ss_pred HHHHHHHHhccC-CEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEE--CCCHHHHHHHHHHHhC
Confidence 789999999999 99999986532 11111 00 01110 0110100000 1123458889999999
Q ss_pred CCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEEe
Q 025336 218 KEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 253 (254)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi~ 253 (254)
+.++ +.+++.|++++++++|+.+.++.. .|++++
T Consensus 316 g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 316 GKIK--PVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred CCEe--cccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 9854 446778999999999999887765 487763
No 125
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=4e-24 Score=175.33 Aligned_cols=236 Identities=24% Similarity=0.302 Sum_probs=179.2
Q ss_pred CCCCcccccCCceeeeeec---cCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC
Q 025336 2 LDGTSRMSVRGQKLYHIFS---CSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL 78 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~~---~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~ 78 (254)
|+++..+++ ||+|+.... .|+|++|+.++...++++|+++++++++.+++++.+||+++.....++++++|+|+|+
T Consensus 74 G~~v~~~~~-Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~ 152 (319)
T cd08267 74 GSGVTRFKV-GDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGA 152 (319)
T ss_pred CCCCCCCCC-CCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 667778899 999997642 4899999999999999999999999999999999999999877777999999999997
Q ss_pred -CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCCh-hHHH
Q 025336 79 -GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLS 156 (254)
Q Consensus 79 -g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~ 156 (254)
|++|++++++++..|+ +|++++.+ ++.+.++++|.+.+++... .++. ...+.+.++|+++||+++. ....
T Consensus 153 ~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---~~~~~~~~~d~vi~~~~~~~~~~~ 224 (319)
T cd08267 153 SGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV---ALTAGGEKYDVIFDAVGNSPFSLY 224 (319)
T ss_pred CcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---hhccCCCCCcEEEECCCchHHHHH
Confidence 9999999999999999 88888765 8888889999988887765 3333 3345556899999999853 2233
Q ss_pred HHHHHcccCCcEEEEEccCCC-ceeec---cHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeec
Q 025336 157 EALETTKVGKGKVIVIGVGVD-TMVPL---NVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKL 232 (254)
Q Consensus 157 ~~~~~l~~~~G~~v~~g~~~~-~~~~~---~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (254)
..+..++++ |+++.+|.... ..... ...... ....+....... ..+.+.++++++.+++++ +.+++.|++
T Consensus 225 ~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~--~~~~~~~~~ 298 (319)
T cd08267 225 RASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGG-GGRRLKFFLAKP--NAEDLEQLAELVEEGKLK--PVIDSVYPL 298 (319)
T ss_pred HhhhccCCC-CEEEEeccccccccccccccchhhcc-ccceEEEEEecC--CHHHHHHHHHHHHCCCee--eeeeeEEcH
Confidence 444448999 99999997654 21111 111111 223333322211 245688899999998854 456788999
Q ss_pred ccHHHHHHHHcCCCe-eEEEE
Q 025336 233 EEIDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 233 ~~~~~a~~~~~~~~~-~k~vi 252 (254)
++++++|+.+.++.. .|+++
T Consensus 299 ~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 299 EDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHHHHHhcCCCCCcEeC
Confidence 999999999987665 36653
No 126
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.92 E-value=1.2e-23 Score=171.61 Aligned_cols=230 Identities=20% Similarity=0.264 Sum_probs=183.9
Q ss_pred CCCCcccccCCceeeeee---ccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC
Q 025336 2 LDGTSRMSVRGQKLYHIF---SCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL 78 (254)
Q Consensus 2 g~~~~~~~~~Gd~v~~~~---~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~ 78 (254)
|+++..+++ ||+|+++. ..|+|++|+.++...++++|+++++.+++.++..+.+++.++.....+.++++|+|+|+
T Consensus 75 G~~~~~~~~-G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~ 153 (309)
T cd05289 75 GPGVTGFKV-GDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGA 153 (309)
T ss_pred CCCCCCCCC-CCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecC
Confidence 556667889 99999775 14899999999999999999999999999999999999999877677999999999996
Q ss_pred -CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHH
Q 025336 79 -GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSE 157 (254)
Q Consensus 79 -g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~ 157 (254)
|.+|++++++++..|+ +|++++.++ +.+.++++|.+.+++... .++.. ...+.++|.++||+++. ....
T Consensus 154 ~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~----~~~~~~~d~v~~~~~~~-~~~~ 223 (309)
T cd05289 154 AGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTK---GDFER----AAAPGGVDAVLDTVGGE-TLAR 223 (309)
T ss_pred CchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCC---Cchhh----ccCCCCceEEEECCchH-HHHH
Confidence 9999999999999999 888887776 888888899888887665 44333 33445899999999987 7899
Q ss_pred HHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhCCCCCCCCceEEEeecccHHH
Q 025336 158 ALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDK 237 (254)
Q Consensus 158 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (254)
++++++++ |+++.+|..... .. ....++.++........ ...+.+++++++++.+ .+.+++.|+++++++
T Consensus 224 ~~~~l~~~-g~~v~~g~~~~~-~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 293 (309)
T cd05289 224 SLALVKPG-GRLVSIAGPPPA-EQ----AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKL--RPVVDRVFPLEDAAE 293 (309)
T ss_pred HHHHHhcC-cEEEEEcCCCcc-hh----hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCE--EEeeccEEcHHHHHH
Confidence 99999999 999999875431 11 22335666666543221 4568889999999884 344677899999999
Q ss_pred HHHHHcCCCe-eEEEE
Q 025336 238 AIQLLKQPDC-VKVLI 252 (254)
Q Consensus 238 a~~~~~~~~~-~k~vi 252 (254)
+|+.+.++.. .|+++
T Consensus 294 a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 294 AHERLESGHARGKVVL 309 (309)
T ss_pred HHHHHHhCCCCCcEeC
Confidence 9999887665 46653
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.86 E-value=4.9e-21 Score=136.75 Aligned_cols=130 Identities=29% Similarity=0.459 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHH
Q 025336 80 TVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 159 (254)
Q Consensus 80 ~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~ 159 (254)
++|++++|+||.+|+ +|+++++++++++.++++|+++++++++ .++.+.+++++++.++|++|||+|.+..++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 589999999999997 9999999999999999999999999998 889999999999889999999999777999999
Q ss_pred HHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHHHHHHhC
Q 025336 160 ETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKN 217 (254)
Q Consensus 160 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 217 (254)
++++++ |+++.+|.......+++...++++++++.|++.+. .++++++++++++
T Consensus 77 ~~l~~~-G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HHEEEE-EEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HHhccC-CEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 999999 99999999885578888999999999999998653 5778888888753
No 128
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.63 E-value=2.8e-14 Score=118.87 Aligned_cols=174 Identities=21% Similarity=0.231 Sum_probs=135.8
Q ss_pred hHHHHHhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHh
Q 025336 58 FGAAWKEAE-VEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGI 136 (254)
Q Consensus 58 ~~~l~~~~~-~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~ 136 (254)
+.++.+..+ .-+|++|+|+|.|++|+.+++.++.+|+ +|++++.++.+.+.++.+|++.+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v--- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV--- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH---
Confidence 344434333 3589999999999999999999999999 89999999999999999998532 1 11122
Q ss_pred hCCCCccEEEEcCCChhHHHHH-HHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHH--HHHH
Q 025336 137 THGMGVDYCFECTGVPSLLSEA-LETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLP--ILLD 213 (254)
Q Consensus 137 ~~~~~~d~v~d~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~--~~~~ 213 (254)
.++|++|+|+|.+..+... ++.++++ |+++.+|.. ...++...+..+++++.++.... ....++ +.+.
T Consensus 256 ---~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~---~~eId~~~L~~~el~i~g~~~~~--~~~~~~~g~aI~ 326 (413)
T cd00401 256 ---KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQV--DRYELPDGRRII 326 (413)
T ss_pred ---cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC---CCccCHHHHHhhccEEEEccCCc--ceEEcCCcchhh
Confidence 2689999999988778776 9999999 999999965 35677777888899998876432 112355 6899
Q ss_pred HHhCCCC-CCCCceEEE-----eecc-cHHHHHHHHcCCCe--eEEEEe
Q 025336 214 KCKNKEF-KLHQLLTHH-----VKLE-EIDKAIQLLKQPDC--VKVLIT 253 (254)
Q Consensus 214 ~~~~~~~-~~~~~~~~~-----~~~~-~~~~a~~~~~~~~~--~k~vi~ 253 (254)
++.+|.+ ++...++|. ++|+ |+.+++..+.++.. .|+++.
T Consensus 327 LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~ 375 (413)
T cd00401 327 LLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFL 375 (413)
T ss_pred hhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEEC
Confidence 9999998 778777777 8899 99999999987654 477764
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.56 E-value=5e-14 Score=120.18 Aligned_cols=156 Identities=19% Similarity=0.230 Sum_probs=114.6
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceE-eCCCCCC----------CchHHHHHHH
Q 025336 67 VEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDF-INPDDEP----------NKSISELVKG 135 (254)
Q Consensus 67 ~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-~~~~~~~----------~~~~~~~i~~ 135 (254)
..++++|+|+|+|++|+++++.|+.+|+ +|+++|.++++.+.++++|++.+ ++..+.+ ..++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4579999999999999999999999999 89999999999999999999854 5553200 0123333333
Q ss_pred h-hC-CCCccEEEEcCCChh-----H-HHHHHHHcccCCcEEEEEccCCC-c-eeeccHHHHHh-CCCEEEeeecCCCCC
Q 025336 136 I-TH-GMGVDYCFECTGVPS-----L-LSEALETTKVGKGKVIVIGVGVD-T-MVPLNVIALAC-GGRTLKGTTFGGIKT 204 (254)
Q Consensus 136 ~-~~-~~~~d~v~d~~g~~~-----~-~~~~~~~l~~~~G~~v~~g~~~~-~-~~~~~~~~~~~-~~~~i~g~~~~~~~~ 204 (254)
. .+ .+++|++|+|++.+. . .+..++.++++ |++++++...+ . ..+.+...++. +++++.|... +.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc-
Confidence 2 22 147999999999632 4 49999999999 99999998543 2 24444445554 8999998762 22
Q ss_pred CCCHHHHHHHHhCCCCCCCCceE
Q 025336 205 KSDLPILLDKCKNKEFKLHQLLT 227 (254)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~ 227 (254)
.+...++.+++.++.+++.++++
T Consensus 317 ~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred hhHHHHHHHHHHhCCccHHHHhc
Confidence 23344689999999887666555
No 130
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.52 E-value=7.9e-15 Score=104.12 Aligned_cols=120 Identities=24% Similarity=0.315 Sum_probs=77.4
Q ss_pred cCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCC--ChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhC
Q 025336 113 FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG--VPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACG 190 (254)
Q Consensus 113 ~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~ 190 (254)
+|+++++||++ +++ .+..+||+||||+| .+..+..+++++ ++ |+++.++. .........+
T Consensus 1 LGAd~vidy~~---~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~------~~~~~~~~~~ 62 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG------DLPSFARRLK 62 (127)
T ss_dssp CT-SEEEETTC---SHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S------HHHHHHHHHH
T ss_pred CCcCEEecCCC---ccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC------cccchhhhhc
Confidence 68999999987 666 34459999999999 554446777788 98 99999884 1111111112
Q ss_pred CCEEEeeecCCCC----CCCCHHHHHHHHhCCCCCCCCceEEEeecccHHHHHHHHcCCCe-eEEEE
Q 025336 191 GRTLKGTTFGGIK----TKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 252 (254)
Q Consensus 191 ~~~i~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~vi 252 (254)
...+....+.... ..+.++++.+++++|+ +++.+.++|||+++++|++.+++++. +|+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~--l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGK--LKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTS--S---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ccceEEEEEEecCCCchHHHHHHHHHHHHHCCC--eEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 2222222222100 1345999999999999 66778889999999999999999888 69986
No 131
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.83 E-value=2.2e-08 Score=80.52 Aligned_cols=162 Identities=19% Similarity=0.220 Sum_probs=100.9
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCCcccHHHHHhc----CCceEeCCCCCCCchHHHHHHHhh-
Q 025336 64 EAEVEKGSSVAVLGLGTVGLGAVDGARMQGAA-KIIGIDKNPWKKEKGEAF----GMTDFINPDDEPNKSISELVKGIT- 137 (254)
Q Consensus 64 ~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~-~v~~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~i~~~~- 137 (254)
...++++++||.+|+|+ |..+.++++..|.. +|++++.+++..+.+++. +...+- ... .+ +.++.
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~---~d----~~~l~~ 142 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRL---GE----IEALPV 142 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEE---cc----hhhCCC
Confidence 45678999999999887 88888888887753 799999999999988763 332221 111 12 12222
Q ss_pred CCCCccEEEEc-C-----CChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEeeecCCCCCCCCHHHH
Q 025336 138 HGMGVDYCFEC-T-----GVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPIL 211 (254)
Q Consensus 138 ~~~~~d~v~d~-~-----g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 211 (254)
....||+|+.. + .....+..+.+.|+++ |+++..+....... + ..+. +...+.+..... .....++
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~~~--~-~~~~-~~~~~~~~~~~~---~~~~~e~ 214 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRGEL--P-EEIR-NDAELYAGCVAG---ALQEEEY 214 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccCCC--C-HHHH-HhHHHHhccccC---CCCHHHH
Confidence 12379999853 3 2244789999999999 99998775433211 1 1111 222222222111 2335556
Q ss_pred HHHHhC-CCCCCCCceEEEeecccHHHHHHHH
Q 025336 212 LDKCKN-KEFKLHQLLTHHVKLEEIDKAIQLL 242 (254)
Q Consensus 212 ~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~ 242 (254)
.+++++ |...........++++++.++++.+
T Consensus 215 ~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 215 LAMLAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHHHHCCCCceEEEeccceecccHHHHHHHh
Confidence 666665 4433333344567889999999888
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.83 E-value=5.5e-08 Score=83.39 Aligned_cols=107 Identities=21% Similarity=0.340 Sum_probs=81.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceE-eCCCCC----------CCchHHHHHHHhh
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDF-INPDDE----------PNKSISELVKGIT 137 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-~~~~~~----------~~~~~~~~i~~~~ 137 (254)
++++++|+|+|.+|+++++.++.+|+ .|++.+.++++++.++++|++.+ ++..+. -.++..+...+..
T Consensus 163 p~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~ 241 (511)
T TIGR00561 163 PPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF 241 (511)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence 57899999999999999999999999 89999999999999999998753 332110 0122333333322
Q ss_pred C--CCCccEEEEcC---CChh---HHHHHHHHcccCCcEEEEEccCCC
Q 025336 138 H--GMGVDYCFECT---GVPS---LLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 138 ~--~~~~d~v~d~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
. ..++|++|+|+ |.+. ..+..++.++++ +.+++++...+
T Consensus 242 ~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~G 288 (511)
T TIGR00561 242 AAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQG 288 (511)
T ss_pred HHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCC
Confidence 2 34799999999 6543 467889999999 99999987665
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.67 E-value=9.1e-07 Score=74.55 Aligned_cols=105 Identities=24% Similarity=0.293 Sum_probs=79.2
Q ss_pred hhhHHHHHhcCCC-CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHH
Q 025336 56 TGFGAAWKEAEVE-KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVK 134 (254)
Q Consensus 56 ta~~~l~~~~~~~-~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~ 134 (254)
.+|.++.....+. .|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+. +.+ ..+.+
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~--------l~eal- 265 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT--------MEEAA- 265 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC--------HHHHH-
Confidence 3455554332444 89999999999999999999999999 999999998887766666654 221 11111
Q ss_pred HhhCCCCccEEEEcCCChhHHH-HHHHHcccCCcEEEEEccCCC
Q 025336 135 GITHGMGVDYCFECTGVPSLLS-EALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 135 ~~~~~~~~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~~ 177 (254)
.++|++++++|....+. ..+..++++ +.++..|....
T Consensus 266 -----~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d~ 303 (425)
T PRK05476 266 -----ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFDN 303 (425)
T ss_pred -----hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCCC
Confidence 17899999999876676 678889998 89888887653
No 134
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.62 E-value=1.1e-06 Score=71.32 Aligned_cols=111 Identities=17% Similarity=0.171 Sum_probs=81.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 148 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~ 148 (254)
.+++++|+|.|.+|+.+++.++.+|+ +|++.++++++.+.++++|...+ .. .++. +.. .++|+||+|
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~l~----~~l--~~aDiVI~t 217 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SELA----EEV--GKIDIIFNT 217 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HHHH----HHh--CCCCEEEEC
Confidence 68999999999999999999999999 99999999888888888886532 21 1222 222 279999999
Q ss_pred CCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHHHhCCCEEEe
Q 025336 149 TGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIALACGGRTLKG 196 (254)
Q Consensus 149 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g 196 (254)
++........++.++++ +.+++++..++ ...+ .....++++..+
T Consensus 218 ~p~~~i~~~~l~~~~~g-~vIIDla~~pg-gtd~--~~a~~~Gv~~~~ 261 (296)
T PRK08306 218 IPALVLTKEVLSKMPPE-ALIIDLASKPG-GTDF--EYAEKRGIKALL 261 (296)
T ss_pred CChhhhhHHHHHcCCCC-cEEEEEccCCC-CcCe--eehhhCCeEEEE
Confidence 87653445677789998 99999988766 1222 122335666654
No 135
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.50 E-value=3.3e-06 Score=70.79 Aligned_cols=93 Identities=26% Similarity=0.303 Sum_probs=74.2
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 67 VEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 67 ~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
..+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...++..|+. +.+ ..+.+ .+.|++|
T Consensus 192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal------~~aDVVI 255 (406)
T TIGR00936 192 LIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA------KIGDIFI 255 (406)
T ss_pred CCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH------hcCCEEE
Confidence 3579999999999999999999999999 899999888887777777763 221 11122 2679999
Q ss_pred EcCCChhHHHH-HHHHcccCCcEEEEEccCC
Q 025336 147 ECTGVPSLLSE-ALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 147 d~~g~~~~~~~-~~~~l~~~~G~~v~~g~~~ 176 (254)
+++|....+.. .+..++++ +.++..|...
T Consensus 256 taTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 256 TATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred ECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 99998877764 78889998 8998888764
No 136
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.37 E-value=2.2e-06 Score=70.12 Aligned_cols=108 Identities=21% Similarity=0.229 Sum_probs=76.3
Q ss_pred CceEEcCCCCCccccccccchhhhhhHHHHHhcCC----CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccH-
Q 025336 33 NYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEV----EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKK- 107 (254)
Q Consensus 33 ~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~- 107 (254)
..++++|+.+..+.++.. .+...++.++. .+.. -++.+|+|+|+|.+|+.+++.++..|..+|+++++++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~-~~~sv~~~Av~-~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISR-GAVSISSAAVE-LAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCC-CCcCHHHHHHH-HHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 356677888888777765 34555665543 2222 3689999999999999999999988876899999988765
Q ss_pred HHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhH
Q 025336 108 EKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSL 154 (254)
Q Consensus 108 ~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~ 154 (254)
++++++|.. +++. +++.+.+ ..+|+||.|++.+..
T Consensus 217 ~la~~~g~~-~~~~-----~~~~~~l------~~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPL-----DELLELL------NEADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeH-----HHHHHHH------hcCCEEEECCCCCch
Confidence 567778873 3322 2222222 168999999998744
No 137
>PLN02494 adenosylhomocysteinase
Probab=98.36 E-value=9.4e-06 Score=68.85 Aligned_cols=92 Identities=21% Similarity=0.294 Sum_probs=74.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEE
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 147 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d 147 (254)
-.|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+.. ++ ..+.+ ...|++++
T Consensus 252 LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v~--------leEal------~~ADVVI~ 315 (477)
T PLN02494 252 IAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-LT--------LEDVV------SEADIFVT 315 (477)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-cc--------HHHHH------hhCCEEEE
Confidence 579999999999999999999999999 8999999888777777777652 21 22222 16799999
Q ss_pred cCCChhHH-HHHHHHcccCCcEEEEEccCC
Q 025336 148 CTGVPSLL-SEALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 148 ~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~ 176 (254)
|.|....+ ...+..++++ +.++.+|...
T Consensus 316 tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~ 344 (477)
T PLN02494 316 TTGNKDIIMVDHMRKMKNN-AIVCNIGHFD 344 (477)
T ss_pred CCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence 99987553 7899999999 9999999853
No 138
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.29 E-value=2.8e-05 Score=61.67 Aligned_cols=147 Identities=18% Similarity=0.287 Sum_probs=91.6
Q ss_pred cccCCceeeeeeccCcceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHH
Q 025336 8 MSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVD 87 (254)
Q Consensus 8 ~~~~Gd~v~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~ 87 (254)
+.+ |++++.. .+|.+|.. +...++.+++++++..+.-- .+.. ....+. ..+.++++||-+|+|. |.+++.
T Consensus 67 ~~~-g~~~~i~---p~~~~~~~-~~~~~i~i~p~~afgtg~h~-tt~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~ 136 (250)
T PRK00517 67 IRI-GDRLWIV---PSWEDPPD-PDEINIELDPGMAFGTGTHP-TTRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIA 136 (250)
T ss_pred EEE-cCCEEEE---CCCcCCCC-CCeEEEEECCCCccCCCCCH-HHHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHH
Confidence 445 6665533 34777755 77788999999888876522 2111 122221 1256789999999987 877776
Q ss_pred HHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCCh---hHHHHHHHHccc
Q 025336 88 GARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP---SLLSEALETTKV 164 (254)
Q Consensus 88 ~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~---~~~~~~~~~l~~ 164 (254)
+++ .|..+|++++.++...+.+++.....-+... -.+ ..+...||+|+-+.... ..++.+.+.+++
T Consensus 137 ~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~----~~~------~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkp 205 (250)
T PRK00517 137 AAK-LGAKKVLAVDIDPQAVEAARENAELNGVELN----VYL------PQGDLKADVIVANILANPLLELAPDLARLLKP 205 (250)
T ss_pred HHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCce----EEE------ccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCC
Confidence 554 6775799999999888887653211101000 000 00111699998665543 245678888999
Q ss_pred CCcEEEEEccCC
Q 025336 165 GKGKVIVIGVGV 176 (254)
Q Consensus 165 ~~G~~v~~g~~~ 176 (254)
+ |+++..|...
T Consensus 206 g-G~lilsgi~~ 216 (250)
T PRK00517 206 G-GRLILSGILE 216 (250)
T ss_pred C-cEEEEEECcH
Confidence 9 9999887643
No 139
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.21 E-value=2.1e-05 Score=65.88 Aligned_cols=98 Identities=20% Similarity=0.238 Sum_probs=69.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEc
Q 025336 70 GSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 148 (254)
Q Consensus 70 ~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~ 148 (254)
+.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.. ++........+ ..++.+.+ ..+|++|+|
T Consensus 167 ~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~l~~~l------~~aDvVI~a 237 (370)
T TIGR00518 167 PGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYEIEDAV------KRADLLIGA 237 (370)
T ss_pred CceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHHHHHHH------ccCCEEEEc
Confidence 4569999999999999999999999 89999999888777654 45432222222 12222222 278999999
Q ss_pred CC---C--hh-HHHHHHHHcccCCcEEEEEccCCC
Q 025336 149 TG---V--PS-LLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 149 ~g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
++ . +. .....++.++++ +.++.++...+
T Consensus 238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 83 2 21 136777889998 99999887655
No 140
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.14 E-value=4.4e-05 Score=65.01 Aligned_cols=93 Identities=24% Similarity=0.320 Sum_probs=72.4
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 67 VEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 67 ~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
.-.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+.. . ++.+.+ ...|+++
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~--------~leell------~~ADIVI 314 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V--------TLEDVV------ETADIFV 314 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c--------cHHHHH------hcCCEEE
Confidence 3479999999999999999999999999 8999988877665555556432 1 122222 2789999
Q ss_pred EcCCChhHHH-HHHHHcccCCcEEEEEccCC
Q 025336 147 ECTGVPSLLS-EALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 147 d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 176 (254)
.+.|....+. ..+..++++ +.++.+|...
T Consensus 315 ~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 315 TATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred ECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 9999876664 888999999 9999998764
No 141
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.12 E-value=8e-05 Score=60.15 Aligned_cols=95 Identities=16% Similarity=0.212 Sum_probs=70.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 148 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~ 148 (254)
.+++++|+|.|.+|+.+++.++..|+ +|++.++++++.+.+.+.|... +.. .++. +.. .++|++++|
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~-----~~l~----~~l--~~aDiVint 216 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL-----NKLE----EKV--AEIDIVINT 216 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH-----HHHH----HHh--ccCCEEEEC
Confidence 57899999999999999999999999 9999999988777776666432 211 2222 222 278999999
Q ss_pred CCChhHHHHHHHHcccCCcEEEEEccCCC
Q 025336 149 TGVPSLLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 149 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
+...-.-...+..++++ ..++.++..++
T Consensus 217 ~P~~ii~~~~l~~~k~~-aliIDlas~Pg 244 (287)
T TIGR02853 217 IPALVLTADVLSKLPKH-AVIIDLASKPG 244 (287)
T ss_pred CChHHhCHHHHhcCCCC-eEEEEeCcCCC
Confidence 97642224566778887 88888887655
No 142
>PRK08324 short chain dehydrogenase; Validated
Probab=98.11 E-value=3.9e-05 Score=69.65 Aligned_cols=140 Identities=17% Similarity=0.222 Sum_probs=86.6
Q ss_pred cceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc
Q 025336 23 TWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGID 101 (254)
Q Consensus 23 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~ 101 (254)
++++|..+|+..++.+ +..+.+++..-.. ...+..+|+++||+|+ |++|+.+++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5677877887777766 5555566542100 0122336789999986 9999999999999999 899999
Q ss_pred CCcccHHHHH-hcCC--c---eEeCCCCCCCchHHHHHHHhh-CCCCccEEEEcCCCh----------------------
Q 025336 102 KNPWKKEKGE-AFGM--T---DFINPDDEPNKSISELVKGIT-HGMGVDYCFECTGVP---------------------- 152 (254)
Q Consensus 102 ~~~~~~~~~~-~~g~--~---~v~~~~~~~~~~~~~~i~~~~-~~~~~d~v~d~~g~~---------------------- 152 (254)
++.++.+.+. .++. . ...|..+ .......+.+.. ...++|++|++.|..
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 9887766543 3332 1 1224433 122333333321 122799999999831
Q ss_pred ---hHHHHHHHHccc---CCcEEEEEccCCC
Q 025336 153 ---SLLSEALETTKV---GKGKVIVIGVGVD 177 (254)
Q Consensus 153 ---~~~~~~~~~l~~---~~G~~v~~g~~~~ 177 (254)
..++.+++.+++ + |+++.+++...
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~~~ 561 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASKNA 561 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCccc
Confidence 123344555555 5 88998887543
No 143
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.06 E-value=2.9e-05 Score=58.68 Aligned_cols=119 Identities=20% Similarity=0.295 Sum_probs=83.1
Q ss_pred CCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce
Q 025336 42 IDLSHASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD 117 (254)
Q Consensus 42 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~ 117 (254)
++.....+++.+...|. |.....++++++||-+|+|+ |..++-+++..| +|+.+++.++=.+.+ +.+|..+
T Consensus 47 lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~n 121 (209)
T COG2518 47 LPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYEN 121 (209)
T ss_pred ccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCc
Confidence 44445555655555554 34788899999999999875 899999999888 699998887755544 4577644
Q ss_pred Ee-CCCCCCCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEcc
Q 025336 118 FI-NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 118 v~-~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
|. ...+ - ...+....+||.|+-+.+.+..-+.+++.|+++ |+++..=.
T Consensus 122 V~v~~gD-----G---~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG 170 (209)
T COG2518 122 VTVRHGD-----G---SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG 170 (209)
T ss_pred eEEEECC-----c---ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence 32 2221 1 122334458999998888775557889999999 98876543
No 144
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.00 E-value=1.1e-05 Score=71.68 Aligned_cols=79 Identities=22% Similarity=0.239 Sum_probs=57.9
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC---------------------cccHHHHHhcCCceEeCCCCC
Q 025336 66 EVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKN---------------------PWKKEKGEAFGMTDFINPDDE 124 (254)
Q Consensus 66 ~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~---------------------~~~~~~~~~~g~~~v~~~~~~ 124 (254)
+.++|++|+|+|+|++|+++++.++..|+ +|++++.. .++.+.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 36789999999999999999999999999 89888753 245566778998766654320
Q ss_pred CCchH-HHHHHHhhCCCCccEEEEcCCCh
Q 025336 125 PNKSI-SELVKGITHGMGVDYCFECTGVP 152 (254)
Q Consensus 125 ~~~~~-~~~i~~~~~~~~~d~v~d~~g~~ 152 (254)
.+. ...+ . .++|.+|+++|..
T Consensus 212 --~~~~~~~~----~-~~~D~Vi~AtG~~ 233 (564)
T PRK12771 212 --EDITLEQL----E-GEFDAVFVAIGAQ 233 (564)
T ss_pred --CcCCHHHH----H-hhCCEEEEeeCCC
Confidence 111 1111 1 2699999999975
No 145
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.93 E-value=0.00011 Score=59.44 Aligned_cols=98 Identities=21% Similarity=0.230 Sum_probs=64.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhc----CCc-eEeCCCCCCCchHHHHHHHhhCCCC
Q 025336 67 VEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAF----GMT-DFINPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 67 ~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
..++++||-+|+|+ |.+++.+++ .|..+|++++.++...+.+++. +.. .+.... .+ ...... .+
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~----~~----~~~~~~-~~ 225 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL----IY----LEQPIE-GK 225 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe----cc----cccccC-CC
Confidence 45789999999887 877777665 5766899999999888777653 211 111111 11 111122 38
Q ss_pred ccEEEEcCCCh---hHHHHHHHHcccCCcEEEEEccCC
Q 025336 142 VDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 142 ~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~ 176 (254)
||+|+...... ..+..+.+.++++ |.++..|...
T Consensus 226 fDlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~~ 262 (288)
T TIGR00406 226 ADVIVANILAEVIKELYPQFSRLVKPG-GWLILSGILE 262 (288)
T ss_pred ceEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCcH
Confidence 99999755432 3466778899999 9999887643
No 146
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.93 E-value=0.00024 Score=54.24 Aligned_cols=102 Identities=23% Similarity=0.387 Sum_probs=70.4
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHh----cC-CceEeCCCCCCCchHHHHHHHh
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEA----FG-MTDFINPDDEPNKSISELVKGI 136 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~----~g-~~~v~~~~~~~~~~~~~~i~~~ 136 (254)
....+.++++||.+|+|+ |.+++++++..+. .+|++++.+++..+.+++ ++ .+.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence 567788999999999987 9999999987652 389999999988886653 55 33222111 2222223222
Q ss_pred hCCCCccEEEEcCCC---hhHHHHHHHHcccCCcEEEEE
Q 025336 137 THGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 137 ~~~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 172 (254)
. ..||.||...+. ...++.+.+.++++ |+++..
T Consensus 109 -~-~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 -N-EKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred -C-CCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2 379999985543 33577888899999 998753
No 147
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.90 E-value=4.8e-05 Score=54.31 Aligned_cols=95 Identities=24% Similarity=0.280 Sum_probs=61.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcCCc--eEeCCCCCCCchHHHHHHHhhCCCCccEE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFGMT--DFINPDDEPNKSISELVKGITHGMGVDYC 145 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g~~--~v~~~~~~~~~~~~~~i~~~~~~~~~d~v 145 (254)
++.+++|+|+|++|.+++..+...|+++++++.|+.+|.+.+. .++.. .++.+.+ +...+ ..+|++
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~------~~~Div 79 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEAL------QEADIV 79 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHH------HTESEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHH------hhCCeE
Confidence 5889999999999999999999999977999999988877654 45322 2344432 22222 179999
Q ss_pred EEcCCChhH--HHHHHHHccc-CCcEEEEEccC
Q 025336 146 FECTGVPSL--LSEALETTKV-GKGKVIVIGVG 175 (254)
Q Consensus 146 ~d~~g~~~~--~~~~~~~l~~-~~G~~v~~g~~ 175 (254)
|+|++.+.. .+..+....+ - +.+++++.+
T Consensus 80 I~aT~~~~~~i~~~~~~~~~~~~-~~v~Dla~P 111 (135)
T PF01488_consen 80 INATPSGMPIITEEMLKKASKKL-RLVIDLAVP 111 (135)
T ss_dssp EE-SSTTSTSSTHHHHTTTCHHC-SEEEES-SS
T ss_pred EEecCCCCcccCHHHHHHHHhhh-hceeccccC
Confidence 999886521 1222222222 1 366677654
No 148
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.87 E-value=0.00012 Score=61.57 Aligned_cols=113 Identities=13% Similarity=0.147 Sum_probs=76.9
Q ss_pred ccchhhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchH
Q 025336 50 LSCGFTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSI 129 (254)
Q Consensus 50 ~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 129 (254)
+..+....+..+....+++++++||-+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-+.... .+.
T Consensus 148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~ 222 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDY 222 (383)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cch
Confidence 333444455556677888999999999986 47788889998899 9999999999999987643221111111 222
Q ss_pred HHHHHHhhCCCCccEEEEc-----CCC---hhHHHHHHHHcccCCcEEEEEcc
Q 025336 130 SELVKGITHGMGVDYCFEC-----TGV---PSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 130 ~~~i~~~~~~~~~d~v~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
.++ .+ .||.|+.. ++. +..+..+.+.|+|+ |+++....
T Consensus 223 ----~~l-~~-~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i 268 (383)
T PRK11705 223 ----RDL-NG-QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI 268 (383)
T ss_pred ----hhc-CC-CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 112 23 79998743 333 23578888899999 99887543
No 149
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.80 E-value=0.00033 Score=51.94 Aligned_cols=104 Identities=21% Similarity=0.265 Sum_probs=71.3
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCceEeCCCCCCCchHHHHHHHhhC
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMTDFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
...++++|+.++=+|+|. |..++++++..-..+|++++++++..+..+ ++|.+++..-. .+..+.+. +
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~----g~Ap~~L~---~ 99 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVE----GDAPEALP---D 99 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEe----ccchHhhc---C
Confidence 567789999877779864 788889996444459999999999888764 57876432222 22222222 2
Q ss_pred CCCccEEEEcCCC--hhHHHHHHHHcccCCcEEEEEccC
Q 025336 139 GMGVDYCFECTGV--PSLLSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 139 ~~~~d~v~d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~ 175 (254)
-..+|.+|=--|. +..++.++..++++ |++|.-...
T Consensus 100 ~~~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait 137 (187)
T COG2242 100 LPSPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT 137 (187)
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence 2268999853332 34688999999999 999876543
No 150
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.80 E-value=0.00014 Score=62.27 Aligned_cols=74 Identities=26% Similarity=0.338 Sum_probs=55.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHH-HHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKE-KGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
.++.+|+|+|+|.+|.++++.++..|+.+|++++++.++.+ +++.+|.+ +++. .+..+.+ .++|+||
T Consensus 180 ~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~-----~~~~~~l------~~aDvVI 247 (423)
T PRK00045 180 LSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL-----DELPEAL------AEADIVI 247 (423)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH-----HHHHHHh------ccCCEEE
Confidence 57889999999999999999999999878999999987755 56777753 3322 1222222 2789999
Q ss_pred EcCCChh
Q 025336 147 ECTGVPS 153 (254)
Q Consensus 147 d~~g~~~ 153 (254)
+|++.+.
T Consensus 248 ~aT~s~~ 254 (423)
T PRK00045 248 SSTGAPH 254 (423)
T ss_pred ECCCCCC
Confidence 9998753
No 151
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.74 E-value=0.00081 Score=52.69 Aligned_cols=104 Identities=17% Similarity=0.259 Sum_probs=66.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-Hh---cCCceEe--CCCCCCCchHHHHHHHhhC-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EA---FGMTDFI--NPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~---~g~~~v~--~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
++++|+|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +. .+..+.+ |..+ .......+.+... ..
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS--TESARNVIEKAAKVLN 80 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 4679999987 9999999999999999 999999988776655 22 2222222 3332 1223333332211 12
Q ss_pred CccEEEEcCCChh-----------------------HHHHHHHHcccCCcEEEEEccCC
Q 025336 141 GVDYCFECTGVPS-----------------------LLSEALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 141 ~~d~v~d~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~~ 176 (254)
++|.++.+.+... .+...+..+.++ |+++.+++..
T Consensus 81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 6899998887421 134455566677 8898888654
No 152
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.71 E-value=0.00029 Score=54.46 Aligned_cols=80 Identities=15% Similarity=0.264 Sum_probs=59.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcCC----ceEeCCCCCCCchHHHHHHHhhCCC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFGM----TDFINPDDEPNKSISELVKGITHGM-G 141 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g~----~~v~~~~~~~~~~~~~~i~~~~~~~-~ 141 (254)
+++.++|+|+ +++|.+.++.....|+ +|+.+.+..++++.+. +++. ...+|-.+ ..+....+..+.... .
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 3567899997 8999999999999999 9999999999998764 5662 22445554 234455555554433 5
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|+.++..|.
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999999985
No 153
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.70 E-value=0.00043 Score=56.72 Aligned_cols=101 Identities=23% Similarity=0.225 Sum_probs=71.2
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhh
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGIT 137 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~ 137 (254)
....++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.+++ .|.+.+.... .+..+.+.
T Consensus 74 ~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~--- 145 (322)
T PRK13943 74 EWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVP--- 145 (322)
T ss_pred HhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhccc---
Confidence 55678899999999987 49999999998764 369999999887766653 5654432222 22222221
Q ss_pred CCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEE
Q 025336 138 HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 138 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 172 (254)
....||+|+.+.+.........+.++++ |+++..
T Consensus 146 ~~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 146 EFAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred ccCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 1237999999888665556788899999 987763
No 154
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.0013 Score=52.88 Aligned_cols=78 Identities=18% Similarity=0.294 Sum_probs=54.4
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceE-eCCCCCCCchHHHHHHHhh-CCCCccEEEE
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDF-INPDDEPNKSISELVKGIT-HGMGVDYCFE 147 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~-~~~~~d~v~d 147 (254)
.++||+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|..+ .+++.+.+.+.. ...++|++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 36899987 9999999999999999 99999898877776665554332 35443 133333333332 2237999999
Q ss_pred cCCC
Q 025336 148 CTGV 151 (254)
Q Consensus 148 ~~g~ 151 (254)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9983
No 155
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.66 E-value=0.0014 Score=49.59 Aligned_cols=101 Identities=20% Similarity=0.191 Sum_probs=63.9
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCCcccHHHHHhcCCceE-eCCCCCCCchHHHHHHHhhCCCC
Q 025336 64 EAEVEKGSSVAVLGLGTVGLGAVDGARMQ-GAAKIIGIDKNPWKKEKGEAFGMTDF-INPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 64 ~~~~~~~~~vlI~G~g~~G~~~~~~a~~~-g~~~v~~v~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
...++++++||.+|+|+-+ .+..+++.. +..+|++++.++.. +..+...+ .+..+ .+..+.+.+...+.+
T Consensus 27 ~~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~ 98 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDK 98 (188)
T ss_pred hcccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCC
Confidence 4567899999999987634 444555543 43489999999754 11233221 23333 344455555555558
Q ss_pred ccEEEE-cC----CC------------hhHHHHHHHHcccCCcEEEEEc
Q 025336 142 VDYCFE-CT----GV------------PSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 142 ~d~v~d-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 173 (254)
+|+|+. .. |. ...+..+.+.++++ |+++...
T Consensus 99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 999994 32 21 23677888999999 9988754
No 156
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.64 E-value=0.00023 Score=48.82 Aligned_cols=93 Identities=24% Similarity=0.297 Sum_probs=63.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHH-HcCCCeEEEEcCCcccHHHHHhc----CC-ceE-eCCCCCCCchHHHHHHHhhCCCC
Q 025336 69 KGSSVAVLGLGTVGLGAVDGAR-MQGAAKIIGIDKNPWKKEKGEAF----GM-TDF-INPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~-~~g~~~v~~v~~~~~~~~~~~~~----g~-~~v-~~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
|+.+||-+|+|. |..++.+++ ..++ +|++++.+++..+.+++. +. +.+ +.. .++ . .......+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~-----~d~-~--~~~~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ-----GDA-E--FDPDFLEP 70 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE-----SCC-H--GGTTTSSC
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE-----Ccc-c--cCcccCCC
Confidence 678999999875 888888888 5677 999999999988887652 21 222 211 222 1 11222347
Q ss_pred ccEEEEcC-CC---h------hHHHHHHHHcccCCcEEEEE
Q 025336 142 VDYCFECT-GV---P------SLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 142 ~d~v~d~~-g~---~------~~~~~~~~~l~~~~G~~v~~ 172 (254)
||+|+... .. . ..++.+.+.++|+ |++++-
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 99999766 21 1 1377888899999 998763
No 157
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.59 E-value=0.0007 Score=53.56 Aligned_cols=80 Identities=18% Similarity=0.236 Sum_probs=57.9
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-----cCCc-eE--eCCCCCCCchHHHHHH-Hhh
Q 025336 68 EKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-----FGMT-DF--INPDDEPNKSISELVK-GIT 137 (254)
Q Consensus 68 ~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-----~g~~-~v--~~~~~~~~~~~~~~i~-~~~ 137 (254)
..+.++||+|+ +++|...+..+...|. +++.+.|++++++.+.+ .|.. .+ +|..+ .+-...+. ++.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~---~~~~~~l~~~l~ 79 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD---PEALERLEDELK 79 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC---hhHHHHHHHHHH
Confidence 45789999997 8999999999999999 99999999999987643 2221 12 35544 44444443 333
Q ss_pred -CCCCccEEEEcCCC
Q 025336 138 -HGMGVDYCFECTGV 151 (254)
Q Consensus 138 -~~~~~d~v~d~~g~ 151 (254)
.+..+|+.+++.|-
T Consensus 80 ~~~~~IdvLVNNAG~ 94 (265)
T COG0300 80 ERGGPIDVLVNNAGF 94 (265)
T ss_pred hcCCcccEEEECCCc
Confidence 23489999999984
No 158
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.57 E-value=0.002 Score=48.32 Aligned_cols=93 Identities=20% Similarity=0.274 Sum_probs=62.8
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceE-eCCCCCCCchHHHHHHHhhCCCCccEEEEcCC
Q 025336 73 VAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFECTG 150 (254)
Q Consensus 73 vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g 150 (254)
|+|+|+ |.+|..+++.+...|. +|++..+++++.+. ..+.+.+ .|..+ . +.+.+... ++|.||++++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~d---~---~~~~~al~--~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLFD---P---DSVKAALK--GADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTTC---H---HHHHHHHT--TSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeehh---h---hhhhhhhh--hcchhhhhhh
Confidence 789997 9999999999999998 99999999988776 3343332 23333 2 22222222 8999999998
Q ss_pred C----hhHHHHHHHHcccC-CcEEEEEccCC
Q 025336 151 V----PSLLSEALETTKVG-KGKVIVIGVGV 176 (254)
Q Consensus 151 ~----~~~~~~~~~~l~~~-~G~~v~~g~~~ 176 (254)
. .......++.++.. -.+++.++...
T Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp STTTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred hhcccccccccccccccccccccceeeeccc
Confidence 4 22355666665544 13777766543
No 159
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.54 E-value=0.0008 Score=57.45 Aligned_cols=78 Identities=19% Similarity=0.264 Sum_probs=57.1
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHH-HHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCc
Q 025336 64 EAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKE-KGEAFGMTDFINPDDEPNKSISELVKGITHGMGV 142 (254)
Q Consensus 64 ~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~ 142 (254)
..+..++++|+|+|+|.+|..+++.++..|+.+|++++++.++.+ +++.+|.. .++. .+..+.+ .++
T Consensus 174 ~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l------~~a 241 (417)
T TIGR01035 174 IFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYL------AEA 241 (417)
T ss_pred HhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHH------hhC
Confidence 334457899999999999999999999999668999999887754 56677754 2321 2222222 179
Q ss_pred cEEEEcCCChh
Q 025336 143 DYCFECTGVPS 153 (254)
Q Consensus 143 d~v~d~~g~~~ 153 (254)
|+||+|++.+.
T Consensus 242 DvVi~aT~s~~ 252 (417)
T TIGR01035 242 DIVISSTGAPH 252 (417)
T ss_pred CEEEECCCCCC
Confidence 99999998654
No 160
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.53 E-value=0.0014 Score=54.78 Aligned_cols=96 Identities=16% Similarity=0.129 Sum_probs=65.3
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcC---C-ceEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 71 SSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFG---M-TDFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 71 ~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g---~-~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
.+|||+|+|.+|+.+++.+.+.|-.+|++++++.++.+.+.... . ...+|-.+ .+.+.+.|+ ++|+||
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~al~~li~------~~d~VI 73 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VDALVALIK------DFDLVI 73 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hHHHHHHHh------cCCEEE
Confidence 47999999999999999988888449999999999888886653 2 23455444 123333332 559999
Q ss_pred EcCCChhHHHHHHHHcccCCcEEEEEccC
Q 025336 147 ECTGVPSLLSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 147 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 175 (254)
++.........+-.+++.+ =.+++....
T Consensus 74 n~~p~~~~~~i~ka~i~~g-v~yvDts~~ 101 (389)
T COG1748 74 NAAPPFVDLTILKACIKTG-VDYVDTSYY 101 (389)
T ss_pred EeCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence 9999874443333455554 456555544
No 161
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.52 E-value=0.00075 Score=50.69 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=56.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC---ceEeCCCCCCCch----HHHHHHHhhCCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM---TDFINPDDEPNKS----ISELVKGITHGM 140 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~---~~v~~~~~~~~~~----~~~~i~~~~~~~ 140 (254)
-|.+|||.|+ +++|+..++-...+|- +||+..+++++++.++..-. ..+.|..+ .+ +++++.+. -.
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~--~P 77 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKE--YP 77 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhh--CC
Confidence 3679999965 8999999999999999 89999999999999876432 23444444 33 44444432 23
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
..++++++.|-
T Consensus 78 ~lNvliNNAGI 88 (245)
T COG3967 78 NLNVLINNAGI 88 (245)
T ss_pred chheeeecccc
Confidence 78999998874
No 162
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=97.50 E-value=0.00083 Score=52.20 Aligned_cols=105 Identities=22% Similarity=0.239 Sum_probs=76.2
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhh
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGIT 137 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~ 137 (254)
.+.++.+|++|+=.|.|+ |.+++-+|+..|. ++|+..+..++..+.+++ +|....+.... .|..+. .
T Consensus 88 ~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~Dv~~~----~ 159 (256)
T COG2519 88 ARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GDVREG----I 159 (256)
T ss_pred HHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---cccccc----c
Confidence 578899999999888775 8888999998875 699999999988888765 34332222222 333222 2
Q ss_pred CCCCccEEE-EcCCChhHHHHHHHHcccCCcEEEEEccCC
Q 025336 138 HGMGVDYCF-ECTGVPSLLSEALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 138 ~~~~~d~v~-d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 176 (254)
.+..||.+| |.-..-..++.+.+.|.++ |.++.+...-
T Consensus 160 ~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~v 198 (256)
T COG2519 160 DEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPTV 198 (256)
T ss_pred cccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCCH
Confidence 333899888 5555556789999999999 9999886543
No 163
>PRK12742 oxidoreductase; Provisional
Probab=97.49 E-value=0.0036 Score=48.95 Aligned_cols=77 Identities=21% Similarity=0.243 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-CcccHHHH-HhcCCceE-eCCCCCCCchHHHHHHHhhCCCCccE
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDK-NPWKKEKG-EAFGMTDF-INPDDEPNKSISELVKGITHGMGVDY 144 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~-~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~i~~~~~~~~~d~ 144 (254)
++.++||+|+ |++|..+++.+...|+ +|+.+.+ ++++.+.+ .+.+...+ .|..+ ...+.+.+.+ ..++|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~---~~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRK---SGALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHH---hCCCcE
Confidence 4678999986 9999999999999999 7877654 34444433 34454332 23332 1223333322 237999
Q ss_pred EEEcCCC
Q 025336 145 CFECTGV 151 (254)
Q Consensus 145 v~d~~g~ 151 (254)
++++.|.
T Consensus 79 li~~ag~ 85 (237)
T PRK12742 79 LVVNAGI 85 (237)
T ss_pred EEECCCC
Confidence 9999874
No 164
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.48 E-value=0.00036 Score=53.88 Aligned_cols=101 Identities=23% Similarity=0.345 Sum_probs=68.3
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHh----cCCce--EeCCCCCCCchHHHHH
Q 025336 61 AWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEA----FGMTD--FINPDDEPNKSISELV 133 (254)
Q Consensus 61 l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i 133 (254)
+.....++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++ .|..+ ++..+ ...
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd------~~~-- 138 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGD------GTL-- 138 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC------ccc--
Confidence 33567789999999999874 7777888887663 389999999988877754 34322 22111 100
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEE
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 172 (254)
.......||.|+-+...+.....+.+.|+++ |+++..
T Consensus 139 -~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 139 -GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 0112348999986554444567888899999 998764
No 165
>PRK04148 hypothetical protein; Provisional
Probab=97.48 E-value=0.00083 Score=47.35 Aligned_cols=96 Identities=21% Similarity=0.237 Sum_probs=62.9
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEE
Q 025336 66 EVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 145 (254)
Q Consensus 66 ~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v 145 (254)
...++.+++++|.| .|...++.+...|. +|+++|.+++..+.+++.+.+.+.+.-- ..+. .+- +++|++
T Consensus 13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~y-----~~a~li 81 (134)
T PRK04148 13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EIY-----KNAKLI 81 (134)
T ss_pred ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HHH-----hcCCEE
Confidence 33456789999998 78756666668899 9999999999999998887654442211 0111 111 288899
Q ss_pred EEcCCChhHHHHHHHHcccCCcEEEEE
Q 025336 146 FECTGVPSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 146 ~d~~g~~~~~~~~~~~l~~~~G~~v~~ 172 (254)
+..-..++..+.+++..+.-+..++..
T Consensus 82 ysirpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 82 YSIRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred EEeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 888887765555555544431344443
No 166
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.0015 Score=52.68 Aligned_cols=78 Identities=19% Similarity=0.279 Sum_probs=55.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceE-eCCCCCCCchHHHHHHHh---hCCCCcc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDF-INPDDEPNKSISELVKGI---THGMGVD 143 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~---~~~~~~d 143 (254)
.+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+...+...+ .|..+ .+++...+.+. .++ .+|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g-~id 78 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGG-RLD 78 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCC-Ccc
Confidence 3568999987 9999999998888999 99999999888877766554432 34443 12233333332 223 799
Q ss_pred EEEEcCC
Q 025336 144 YCFECTG 150 (254)
Q Consensus 144 ~v~d~~g 150 (254)
+++++.|
T Consensus 79 ~li~~Ag 85 (277)
T PRK05993 79 ALFNNGA 85 (277)
T ss_pred EEEECCC
Confidence 9999876
No 167
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.44 E-value=0.0003 Score=53.97 Aligned_cols=101 Identities=23% Similarity=0.415 Sum_probs=65.8
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCCcccHHHHHh----cCCceE-eCCCCCCCchHHHHHHH
Q 025336 62 WKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAA-KIIGIDKNPWKKEKGEA----FGMTDF-INPDDEPNKSISELVKG 135 (254)
Q Consensus 62 ~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~-~v~~v~~~~~~~~~~~~----~g~~~v-~~~~~~~~~~~~~~i~~ 135 (254)
.+...+++|++||-+|+|+ |..++-+++..|.. +|+.++..++-.+.+++ ++.+.+ +...+ ... .
T Consensus 65 l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd-----g~~---g 135 (209)
T PF01135_consen 65 LEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD-----GSE---G 135 (209)
T ss_dssp HHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES------GGG---T
T ss_pred HHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc-----hhh---c
Confidence 3677799999999999875 78888888877753 68999988876665543 455432 21111 111 1
Q ss_pred hhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEE
Q 025336 136 ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 136 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 172 (254)
+....+||.++-+.+-+..-...++.|+++ |++|..
T Consensus 136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 122338999998887765557888899999 999874
No 168
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.42 E-value=0.0014 Score=49.06 Aligned_cols=91 Identities=24% Similarity=0.453 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 148 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~ 148 (254)
.|.+|.|+|.|.+|+..++.++.+|+ +|++.+++....+.....+.. . .++.+.+. ..|+++.+
T Consensus 35 ~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~--~-------~~l~ell~------~aDiv~~~ 98 (178)
T PF02826_consen 35 RGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE--Y-------VSLDELLA------QADIVSLH 98 (178)
T ss_dssp TTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE--E-------SSHHHHHH------H-SEEEE-
T ss_pred CCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce--e-------eehhhhcc------hhhhhhhh
Confidence 68999999999999999999999999 999999987766544444432 1 22333222 57888887
Q ss_pred CCChh-----HHHHHHHHcccCCcEEEEEccCC
Q 025336 149 TGVPS-----LLSEALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 149 ~g~~~-----~~~~~~~~l~~~~G~~v~~g~~~ 176 (254)
....+ .-...+..++++ ..+|-++...
T Consensus 99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~aRG~ 130 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPG-AVLVNVARGE 130 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTT-EEEEESSSGG
T ss_pred hccccccceeeeeeeeeccccc-eEEEeccchh
Confidence 76321 124667788887 7777776643
No 169
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.41 E-value=0.0037 Score=47.32 Aligned_cols=78 Identities=15% Similarity=0.235 Sum_probs=57.2
Q ss_pred CCEEEEEc-C-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcCC-ceEeCCCCCCCchH---HHHHHHhhCCCCc
Q 025336 70 GSSVAVLG-L-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFGM-TDFINPDDEPNKSI---SELVKGITHGMGV 142 (254)
Q Consensus 70 ~~~vlI~G-~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g~-~~v~~~~~~~~~~~---~~~i~~~~~~~~~ 142 (254)
...|||.| + |++|.+...-..+.|+ .|+++.++.++++.+. ++|- ..-+|..+ +++. ...++..+.| ..
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~--~~~V~~v~~evr~~~~G-kl 82 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSK--PEEVVTVSGEVRANPDG-KL 82 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCC--hHHHHHHHHHHhhCCCC-ce
Confidence 46799997 4 9999999988889999 9999999999999876 6663 22234433 2333 3444554555 89
Q ss_pred cEEEEcCCC
Q 025336 143 DYCFECTGV 151 (254)
Q Consensus 143 d~v~d~~g~ 151 (254)
|+.++..|.
T Consensus 83 d~L~NNAG~ 91 (289)
T KOG1209|consen 83 DLLYNNAGQ 91 (289)
T ss_pred EEEEcCCCC
Confidence 999998875
No 170
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.39 E-value=0.0024 Score=44.45 Aligned_cols=100 Identities=18% Similarity=0.327 Sum_probs=66.6
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCce--EeCCCCCCCchHHHHHHHh
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTD--FINPDDEPNKSISELVKGI 136 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i~~~ 136 (254)
....+.++++|+-+|+|. |..+..+++..+..+|++++.++...+.+++ ++... ++..+- ... ....
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~---~~~~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PEA---LEDS 85 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---ccc---Chhh
Confidence 445667788999999876 8888999987653489999999988877654 33322 221111 110 1111
Q ss_pred hCCCCccEEEEcCCC---hhHHHHHHHHcccCCcEEEEE
Q 025336 137 THGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 137 ~~~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 172 (254)
. ..+|+|+-.... ...++.+.+.++++ |+++.-
T Consensus 86 -~-~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 86 -L-PEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred -c-CCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 1 389999975533 23678888999999 998764
No 171
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.38 E-value=0.00019 Score=57.55 Aligned_cols=100 Identities=19% Similarity=0.294 Sum_probs=62.1
Q ss_pred HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCc-e-EeCCCCCCCchHHHHH
Q 025336 60 AAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMT-D-FINPDDEPNKSISELV 133 (254)
Q Consensus 60 ~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~-v~~~~~~~~~~~~~~i 133 (254)
.+.++.++++|++||-+|+| -|..+..+++..|+ +|++++.+++..+++++ .|.. . -+.. .++
T Consensus 53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~-----~D~---- 121 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL-----QDY---- 121 (273)
T ss_dssp HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE-----S-G----
T ss_pred HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE-----eec----
Confidence 34578899999999999987 47788889998899 99999999999988754 4421 1 1111 111
Q ss_pred HHhhCCCCccEEEE-----cCCC---hhHHHHHHHHcccCCcEEEEEc
Q 025336 134 KGITHGMGVDYCFE-----CTGV---PSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 134 ~~~~~~~~~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g 173 (254)
+++. + .||.|+. .+|. +..+..+-+.|+|+ |++++-.
T Consensus 122 ~~~~-~-~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~ 166 (273)
T PF02353_consen 122 RDLP-G-KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT 166 (273)
T ss_dssp GG-----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred cccC-C-CCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 1222 2 8898864 3443 23577888899999 9987543
No 172
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0019 Score=50.26 Aligned_cols=77 Identities=19% Similarity=0.347 Sum_probs=52.8
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceE--eCCCCCCCchHHHHHHHhhCCCCccEEEE
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDF--INPDDEPNKSISELVKGITHGMGVDYCFE 147 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~~i~~~~~~~~~d~v~d 147 (254)
.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+++++...+ .|..+ .++..+.+..+.+ .++|+++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~-~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQG-QRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhc-CCCCEEEE
Confidence 46899986 9999999988888899 99999998887766655542222 34333 2333333444433 38999998
Q ss_pred cCCC
Q 025336 148 CTGV 151 (254)
Q Consensus 148 ~~g~ 151 (254)
+.|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 8764
No 173
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.36 E-value=0.0017 Score=49.87 Aligned_cols=100 Identities=15% Similarity=0.134 Sum_probs=66.7
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCCcccHHHHHh----cCCc---eEeCCCCCCCchHHHHH
Q 025336 62 WKEAEVEKGSSVAVLGLGTVGLGAVDGARMQG-AAKIIGIDKNPWKKEKGEA----FGMT---DFINPDDEPNKSISELV 133 (254)
Q Consensus 62 ~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g-~~~v~~v~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i 133 (254)
.....++++++||-+|+|. |..+..+++..+ ..+|++++.+++-.+.+++ .+.. .++..+ ..+.+
T Consensus 65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d------~~~~~ 137 (205)
T PRK13944 65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD------GKRGL 137 (205)
T ss_pred HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC------cccCC
Confidence 3566788999999999865 777777787764 2389999999887766653 4432 222211 11111
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEE
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 172 (254)
.....||.|+-+.......+.+.+.|+++ |+++..
T Consensus 138 ---~~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 138 ---EKHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred ---ccCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 11238999997665444557888999999 998764
No 174
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.35 E-value=0.0016 Score=56.82 Aligned_cols=73 Identities=18% Similarity=0.250 Sum_probs=54.2
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 67 VEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 67 ~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
+.++++|+|+|.|.+|++++++++..|+ +|++.|..+++.+.+++.|... +.... ..+.+ ..+|+|+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~-----~~~~l------~~~D~VV 75 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD-----AVQQI------ADYALVV 75 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc-----hHhHh------hcCCEEE
Confidence 4578899999999999999999999999 9999987766666677777643 32211 11122 2679999
Q ss_pred EcCCCh
Q 025336 147 ECTGVP 152 (254)
Q Consensus 147 d~~g~~ 152 (254)
.+.|-+
T Consensus 76 ~SpGi~ 81 (488)
T PRK03369 76 TSPGFR 81 (488)
T ss_pred ECCCCC
Confidence 988864
No 175
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.35 E-value=0.00066 Score=52.55 Aligned_cols=102 Identities=21% Similarity=0.256 Sum_probs=66.2
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHh
Q 025336 62 WKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGI 136 (254)
Q Consensus 62 ~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~ 136 (254)
.....++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++ +|.+.+--.. .+.... .
T Consensus 70 ~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~----~d~~~~---~ 141 (215)
T TIGR00080 70 TELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIV----GDGTQG---W 141 (215)
T ss_pred HHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEE----CCcccC---C
Confidence 3566788999999998764 7777778877653 369999999887777654 4433221001 111111 1
Q ss_pred hCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEE
Q 025336 137 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 137 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 172 (254)
.....||+|+-+...+...+.+.+.++++ |+++..
T Consensus 142 ~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 142 EPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred cccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 12237999985544444567788999999 998764
No 176
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=97.35 E-value=0.0059 Score=47.62 Aligned_cols=94 Identities=14% Similarity=0.178 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCC--eEEEEcCC----cccH--------HHHHhcCCceEeCCCCCCCchHHHHH
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAA--KIIGIDKN----PWKK--------EKGEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~--~v~~v~~~----~~~~--------~~~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
-++.+++|+|+|+.|..++..+...|++ +++.++++ .++. ++++.++... . + .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence 4578999999999999999998999997 89999998 4442 2344433211 1 0 1233333
Q ss_pred HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccC
Q 025336 134 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 175 (254)
.++|++|++++....-+..++.+.++ ..++.+..+
T Consensus 96 ------~~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~lsnP 130 (226)
T cd05311 96 ------KGADVFIGVSRPGVVKKEMIKKMAKD-PIVFALANP 130 (226)
T ss_pred ------hcCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeCCC
Confidence 15899999997331224666777776 666555533
No 177
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.35 E-value=0.0042 Score=54.58 Aligned_cols=47 Identities=21% Similarity=0.191 Sum_probs=39.0
Q ss_pred HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH
Q 025336 63 KEAEVEKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG 110 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~ 110 (254)
...+.+.|.+|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 3455668899999987 9999999999988999 899998988776543
No 178
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.30 E-value=0.0017 Score=49.03 Aligned_cols=98 Identities=17% Similarity=0.185 Sum_probs=63.0
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhhCCCCc
Q 025336 67 VEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGITHGMGV 142 (254)
Q Consensus 67 ~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~ 142 (254)
++++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++ .+.+. +.... .+..+ ......|
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~---~d~~~----~~~~~~f 113 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVH---GRAEE----FGQEEKF 113 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEe---ccHhh----CCCCCCc
Confidence 44588999998764 6666666664443399999999987777654 44432 11121 22222 2223479
Q ss_pred cEEEEcC-CC-hhHHHHHHHHcccCCcEEEEEcc
Q 025336 143 DYCFECT-GV-PSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 143 d~v~d~~-g~-~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
|+|+-.. +. +..++.+.+.++++ |+++.+-.
T Consensus 114 DlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~~ 146 (187)
T PRK00107 114 DVVTSRAVASLSDLVELCLPLLKPG-GRFLALKG 146 (187)
T ss_pred cEEEEccccCHHHHHHHHHHhcCCC-eEEEEEeC
Confidence 9999533 22 34677888999999 99987743
No 179
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.27 E-value=0.011 Score=47.88 Aligned_cols=97 Identities=13% Similarity=0.194 Sum_probs=68.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHH-HcCCCeEEEEcCCcccHHHHHhcCC-ceEeCCCCCCCchHHHHHHHhhCCCCccEE
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGAR-MQGAAKIIGIDKNPWKKEKGEAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYC 145 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~-~~g~~~v~~v~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v 145 (254)
..+.|+|..+ +=+++.++..++ ..+..+++.+ .|+...++.+.+|. |.|+.|.+ |..+... .--++
T Consensus 135 ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vgl-TS~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~-~~~v~ 203 (314)
T PF11017_consen 135 GAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGL-TSARNVAFVESLGCYDEVLTYDD---------IDSLDAP-QPVVI 203 (314)
T ss_pred CccEEEEeccchHHHHHHHHHhhccCCCceEEEE-ecCcchhhhhccCCceEEeehhh---------hhhccCC-CCEEE
Confidence 3456777765 777877777777 5555488888 77778889999994 78888875 4444333 66788
Q ss_pred EEcCCChhHHHHHHHHcccCCcEEEEEccCC
Q 025336 146 FECTGVPSLLSEALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 146 ~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 176 (254)
+|..|+......+.+.+...=-..+.+|...
T Consensus 204 VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 204 VDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 8999998887888888876412456666544
No 180
>PRK07402 precorrin-6B methylase; Provisional
Probab=97.26 E-value=0.0086 Score=45.60 Aligned_cols=103 Identities=19% Similarity=0.275 Sum_probs=64.0
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCce--EeCCCCCCCchHHHHHHH
Q 025336 62 WKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTD--FINPDDEPNKSISELVKG 135 (254)
Q Consensus 62 ~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i~~ 135 (254)
.....++++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++. .+..+.+..
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~------~d~~~~~~~ 105 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE------GSAPECLAQ 105 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE------CchHHHHhh
Confidence 4556778899998888753 5566666765433389999999988877754 45432 222 222222222
Q ss_pred hhCCCCccEE-EEcCCC-hhHHHHHHHHcccCCcEEEEEcc
Q 025336 136 ITHGMGVDYC-FECTGV-PSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 136 ~~~~~~~d~v-~d~~g~-~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
+.. .+|.+ ++.... ...++.+.+.++++ |+++....
T Consensus 106 ~~~--~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 106 LAP--APDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CCC--CCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 221 34444 443222 34678888999999 99887754
No 181
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=97.26 E-value=0.001 Score=52.34 Aligned_cols=109 Identities=18% Similarity=0.202 Sum_probs=68.4
Q ss_pred HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHh----cCCc-eE-eCCCCCCCchHHHH
Q 025336 60 AAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEA----FGMT-DF-INPDDEPNKSISEL 132 (254)
Q Consensus 60 ~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~----~g~~-~v-~~~~~~~~~~~~~~ 132 (254)
.+....+++||++|+=.|.|+ |.+...+++..|. ++|+..+..+++.+.+++ +|.. .+ +..++ ..+.
T Consensus 31 ~I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D-----v~~~ 104 (247)
T PF08704_consen 31 YILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD-----VCEE 104 (247)
T ss_dssp HHHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES------GGCG
T ss_pred HHHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc-----eecc
Confidence 344678899999999888664 7778888887763 489999999998888764 4542 22 22222 2110
Q ss_pred HHHhhCCCCccEEE-EcCCChhHHHHHHHHc-ccCCcEEEEEccC
Q 025336 133 VKGITHGMGVDYCF-ECTGVPSLLSEALETT-KVGKGKVIVIGVG 175 (254)
Q Consensus 133 i~~~~~~~~~d~v~-d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~ 175 (254)
-....-...+|.|| |--..-..++.+.+.| +++ |+++.+...
T Consensus 105 g~~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP~ 148 (247)
T PF08704_consen 105 GFDEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSPC 148 (247)
T ss_dssp --STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEESS
T ss_pred cccccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCC
Confidence 00000123789998 5444445789999999 898 999998644
No 182
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0025 Score=50.13 Aligned_cols=77 Identities=18% Similarity=0.285 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCce-EeCCCCCCCchHHHHHHHhhCCCCccEE
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMTD-FINPDDEPNKSISELVKGITHGMGVDYC 145 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~~-v~~~~~~~~~~~~~~i~~~~~~~~~d~v 145 (254)
++.+++|+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ .+... ..|..+ .+....+.+. ..++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~--~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA--AGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH--hCCCCEE
Confidence 4678999987 8999999999999999 89999888776655433 34332 234443 3322322222 2379999
Q ss_pred EEcCCC
Q 025336 146 FECTGV 151 (254)
Q Consensus 146 ~d~~g~ 151 (254)
|++.|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 998874
No 183
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0082 Score=47.29 Aligned_cols=102 Identities=20% Similarity=0.180 Sum_probs=61.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcc-cHHHH----HhcCCce---EeCCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPW-KKEKG----EAFGMTD---FINPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~-~~~~~----~~~g~~~---v~~~~~~~~~~~~~~i~~~~~- 138 (254)
++.++||+|+ |.+|..+++.+...|. +|+++.++.+ +.+.+ +..+... ..|..+ .++....+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 3578999987 9999999998888999 8888877643 22222 2223221 124443 2333333333222
Q ss_pred CCCccEEEEcCCCh-------------------hHHHHHHHHcccCCcEEEEEcc
Q 025336 139 GMGVDYCFECTGVP-------------------SLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 139 ~~~~d~v~d~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
..++|+++.+.+.. ..++.+.+.+... |+++.+++
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 12689999877642 1234455555566 88888765
No 184
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0016 Score=53.85 Aligned_cols=80 Identities=18% Similarity=0.294 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce-E--eCCCCCCCchHHHHHHHhh-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD-F--INPDDEPNKSISELVKGIT-HG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~i~~~~-~~ 139 (254)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.|.+. + .|..+ .++..+.+.+.. ..
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence 4678999987 8999999999999999 899999988776543 3345432 1 24433 122222222221 11
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|++|++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 379999999873
No 185
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.24 E-value=0.0046 Score=45.09 Aligned_cols=92 Identities=23% Similarity=0.325 Sum_probs=60.1
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 67 VEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 67 ~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
.-.|.+++|.|-|-+|.-.++.++.+|+ +|++++.++-+.-.+..-|.. +. +..+ .. ...|+++
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~--------~~~~----a~--~~adi~v 83 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM--------TLEE----AL--RDADIFV 83 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE---------HHH----HT--TT-SEEE
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec--------CHHH----HH--hhCCEEE
Confidence 3478999999999999999999999999 999999999777666666654 22 1222 21 2679999
Q ss_pred EcCCChhH-HHHHHHHcccCCcEEEEEccC
Q 025336 147 ECTGVPSL-LSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 147 d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~ 175 (254)
-++|.... -..-++.++++ ..+...|..
T Consensus 84 taTG~~~vi~~e~~~~mkdg-ail~n~Gh~ 112 (162)
T PF00670_consen 84 TATGNKDVITGEHFRQMKDG-AILANAGHF 112 (162)
T ss_dssp E-SSSSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred ECCCCccccCHHHHHHhcCC-eEEeccCcC
Confidence 99998654 35778888887 555555543
No 186
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.23 E-value=0.0064 Score=46.56 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
.+.+|+|.|+|++|..+++.+...|.++++.+|.+.
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ 55 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDH 55 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 457899999999999999999999998999998773
No 187
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=97.23 E-value=0.0045 Score=50.06 Aligned_cols=133 Identities=24% Similarity=0.365 Sum_probs=74.6
Q ss_pred ceeeEEecCCceEEcCCCCCccccccccchhhhhh--HHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc
Q 025336 24 WSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGF--GAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGID 101 (254)
Q Consensus 24 ~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~--~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~ 101 (254)
|.+|-.-+...++.+.+++.|-.+. .-.|.. .+|... .+++++||=+|.|+ |.+++..+| +|+++|+++|
T Consensus 120 w~~~~~~~~~~~I~idPg~AFGTG~----H~TT~lcl~~l~~~--~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~D 191 (295)
T PF06325_consen 120 WEEYPEPPDEIVIEIDPGMAFGTGH----HPTTRLCLELLEKY--VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAID 191 (295)
T ss_dssp T----SSTTSEEEEESTTSSS-SSH----CHHHHHHHHHHHHH--SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEE
T ss_pred CcccCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHHh--ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEec
Confidence 6666332445567777776665543 222221 122222 56789999998653 555554444 5998999999
Q ss_pred CCcccHHHHHh----cCC-ceE-eCCCCCCCchHHHHHHHhhCCCCccEEEEcCCChh---HHHHHHHHcccCCcEEEEE
Q 025336 102 KNPWKKEKGEA----FGM-TDF-INPDDEPNKSISELVKGITHGMGVDYCFECTGVPS---LLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 102 ~~~~~~~~~~~----~g~-~~v-~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~---~~~~~~~~l~~~~G~~v~~ 172 (254)
.++.-.+.+++ .|. +.+ +... .+. .. ..||+|+-.+-... ..+.+.+.++++ |.+++.
T Consensus 192 iDp~Av~~a~~N~~~N~~~~~~~v~~~----~~~-------~~-~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlS 258 (295)
T PF06325_consen 192 IDPLAVEAARENAELNGVEDRIEVSLS----EDL-------VE-GKFDLVVANILADVLLELAPDIASLLKPG-GYLILS 258 (295)
T ss_dssp SSCHHHHHHHHHHHHTT-TTCEEESCT----SCT-------CC-S-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeeEEEEEe----ccc-------cc-ccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEc
Confidence 99887666654 332 122 2111 111 11 38999997766542 344556678999 999999
Q ss_pred ccCCC
Q 025336 173 GVGVD 177 (254)
Q Consensus 173 g~~~~ 177 (254)
|....
T Consensus 259 GIl~~ 263 (295)
T PF06325_consen 259 GILEE 263 (295)
T ss_dssp EEEGG
T ss_pred cccHH
Confidence 88765
No 188
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.22 E-value=0.0014 Score=52.29 Aligned_cols=105 Identities=16% Similarity=0.240 Sum_probs=76.1
Q ss_pred hhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCc-e--E--eCCCCCCC
Q 025336 56 TGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMT-D--F--INPDDEPN 126 (254)
Q Consensus 56 ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~--v--~~~~~~~~ 126 (254)
.++..+....++++|++||=+|.|- |.+++-+|+..|+ +|++++-|++..+.+++ .|-. + + -|+++
T Consensus 59 ~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd--- 133 (283)
T COG2230 59 AKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD--- 133 (283)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc---
Confidence 3555566889999999999999875 8888999999999 99999999998888765 4432 1 1 13332
Q ss_pred chHHHHHHHhhCCCCccEEE-----EcCCC---hhHHHHHHHHcccCCcEEEEEccCCC
Q 025336 127 KSISELVKGITHGMGVDYCF-----ECTGV---PSLLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 127 ~~~~~~i~~~~~~~~~d~v~-----d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
+. + .||-|+ +.+|. +..+..+-+.|.++ |++..-.....
T Consensus 134 ---------~~-e-~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~ 180 (283)
T COG2230 134 ---------FE-E-PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGP 180 (283)
T ss_pred ---------cc-c-ccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCC
Confidence 21 1 477664 34454 33577888899999 99987766544
No 189
>PRK00811 spermidine synthase; Provisional
Probab=97.21 E-value=0.0022 Score=51.79 Aligned_cols=98 Identities=12% Similarity=0.040 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC--------ceEeCCCCCCCchHHHHHHHhhCCC
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM--------TDFINPDDEPNKSISELVKGITHGM 140 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~--------~~v~~~~~~~~~~~~~~i~~~~~~~ 140 (254)
..++||++|+|. |..+..++++.+..+|++++.+++-.+.++++-. +.-+.... .|....+.. . ..
T Consensus 76 ~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~---~Da~~~l~~-~-~~ 149 (283)
T PRK00811 76 NPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI---GDGIKFVAE-T-EN 149 (283)
T ss_pred CCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE---CchHHHHhh-C-CC
Confidence 457899998765 7777778887776699999999998888876321 10000111 334444443 2 33
Q ss_pred CccEEEEcC-CC---------hhHHHHHHHHcccCCcEEEEEc
Q 025336 141 GVDYCFECT-GV---------PSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 141 ~~d~v~d~~-g~---------~~~~~~~~~~l~~~~G~~v~~g 173 (254)
.||+|+-.. .. ...+..+.+.|+++ |.++...
T Consensus 150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 899999432 11 12356778899999 9988753
No 190
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.20 E-value=0.011 Score=47.26 Aligned_cols=106 Identities=22% Similarity=0.317 Sum_probs=69.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce---Ee--CCCCCCCchHHHHHHHhh-
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD---FI--NPDDEPNKSISELVKGIT- 137 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~---v~--~~~~~~~~~~~~~i~~~~- 137 (254)
.+..|+|+|+ +++|..++.-.-..|+ +++.+.+..++++.+ ++.++.. ++ |-.+ .++..+.+.+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAIR 87 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHHH
Confidence 4788999997 8999988887788899 777777888877776 3344322 22 3332 234444443322
Q ss_pred CCCCccEEEEcCCChh-------------------------HHHHHHHHcccCC-cEEEEEccCCC
Q 025336 138 HGMGVDYCFECTGVPS-------------------------LLSEALETTKVGK-GKVIVIGVGVD 177 (254)
Q Consensus 138 ~~~~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~~-G~~v~~g~~~~ 177 (254)
.-.++|+.+++.|-.. ....++..+++.+ |+++.+++..+
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence 2348999999888411 2345556665443 89999998776
No 191
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.18 E-value=0.0056 Score=47.08 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=71.0
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCCcccHHHHHh----cCCce-EeCCCCCCCchHHHHHHHhh
Q 025336 64 EAEVEKGSSVAVLGLGTVGLGAVDGARMQG-AAKIIGIDKNPWKKEKGEA----FGMTD-FINPDDEPNKSISELVKGIT 137 (254)
Q Consensus 64 ~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~i~~~~ 137 (254)
..+.+...+||=+|.+ +|..++.+|..+. -.+++.++.++++.+.+++ .|.+. +.-... .+..+.+.+..
T Consensus 54 L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~---gdal~~l~~~~ 129 (219)
T COG4122 54 LARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG---GDALDVLSRLL 129 (219)
T ss_pred HHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec---CcHHHHHHhcc
Confidence 4455677889988853 4777788888666 3489999999999999876 46543 221121 25666666532
Q ss_pred CCCCccEEE-EcCC--ChhHHHHHHHHcccCCcEEEEE
Q 025336 138 HGMGVDYCF-ECTG--VPSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 138 ~~~~~d~v~-d~~g--~~~~~~~~~~~l~~~~G~~v~~ 172 (254)
. ..||+|| |+-- .+..++.+++.++++ |.++.=
T Consensus 130 ~-~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~D 165 (219)
T COG4122 130 D-GSFDLVFIDADKADYPEYLERALPLLRPG-GLIVAD 165 (219)
T ss_pred C-CCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEe
Confidence 3 3899999 5543 345789999999998 877653
No 192
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=97.18 E-value=0.0048 Score=47.64 Aligned_cols=104 Identities=20% Similarity=0.219 Sum_probs=62.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcc------cHHHH--HhcC---------------C-ceEeCCCCC
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPW------KKEKG--EAFG---------------M-TDFINPDDE 124 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~------~~~~~--~~~g---------------~-~~v~~~~~~ 124 (254)
+.++|+|.|.|++|.+++..+.+.|++++..+|.+.- |+-.+ ...| + -.|-..++
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~- 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND- 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence 4578999999999999999999999998888866431 11111 1122 1 11111111
Q ss_pred CCchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHH-HcccCCcEEEEEccCCC
Q 025336 125 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE-TTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 125 ~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~-~l~~~~G~~v~~g~~~~ 177 (254)
.-..+.+.++... +||+|+||+..-..=-.++. +.+.+ =.++..+...+
T Consensus 108 --f~t~en~~~~~~~-~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag~ 157 (263)
T COG1179 108 --FITEENLEDLLSK-GFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAGG 157 (263)
T ss_pred --hhCHhHHHHHhcC-CCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccccC
Confidence 1122334445454 99999999987533234444 44444 56666665443
No 193
>PLN02366 spermidine synthase
Probab=97.17 E-value=0.005 Score=50.25 Aligned_cols=103 Identities=15% Similarity=0.043 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc--eEeCCCCC--CCchHHHHHHHhhCCCCcc
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT--DFINPDDE--PNKSISELVKGITHGMGVD 143 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~--~v~~~~~~--~~~~~~~~i~~~~~~~~~d 143 (254)
...++||++|+|. |.++..++++.+..+|++++.+++-.+.++++-.. ..++.... -..|....+++.. +..||
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~-~~~yD 167 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAP-EGTYD 167 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhcc-CCCCC
Confidence 4568899998765 66677888887766899999998888888774211 00100000 0034444444432 33799
Q ss_pred EEEE-cCCC---------hhHHHHHHHHcccCCcEEEEEc
Q 025336 144 YCFE-CTGV---------PSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 144 ~v~d-~~g~---------~~~~~~~~~~l~~~~G~~v~~g 173 (254)
+||- .... ...++.+.+.|+++ |.++.-.
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 9984 3321 12467888899999 9987543
No 194
>PRK06182 short chain dehydrogenase; Validated
Probab=97.16 E-value=0.0045 Score=49.64 Aligned_cols=79 Identities=20% Similarity=0.230 Sum_probs=54.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCce-EeCCCCCCCchHHHHHHHhh-CCCCccEEE
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTD-FINPDDEPNKSISELVKGIT-HGMGVDYCF 146 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~-~~~~~d~v~ 146 (254)
+.+++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+...+... ..|..+ .+++...+.+.. ...++|+++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEE
Confidence 578999987 9999999999888999 9999989887776655444432 234443 233333343332 123799999
Q ss_pred EcCCC
Q 025336 147 ECTGV 151 (254)
Q Consensus 147 d~~g~ 151 (254)
++.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99874
No 195
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.14 E-value=0.0047 Score=50.60 Aligned_cols=92 Identities=26% Similarity=0.427 Sum_probs=62.0
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcC
Q 025336 71 SSVAVLGLGTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 149 (254)
Q Consensus 71 ~~vlI~G~g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~ 149 (254)
.+|.|+|+|.+|...+..++..|. .+|++.++++++.+.+++.|....+. .+..+.+ ...|+|+.|+
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~------~~aDvViiav 74 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV------KGADLVILCV 74 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh------cCCCEEEECC
Confidence 579999999999999998888884 37999999998888888877532111 1111111 2689999999
Q ss_pred CChhH---HHHHHHHcccCCcEEEEEccC
Q 025336 150 GVPSL---LSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 150 g~~~~---~~~~~~~l~~~~G~~v~~g~~ 175 (254)
..... +......++++ ..++.+|+.
T Consensus 75 p~~~~~~v~~~l~~~l~~~-~iv~dvgs~ 102 (307)
T PRK07502 75 PVGASGAVAAEIAPHLKPG-AIVTDVGSV 102 (307)
T ss_pred CHHHHHHHHHHHHhhCCCC-CEEEeCccc
Confidence 86422 33333455666 666666543
No 196
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0085 Score=47.18 Aligned_cols=80 Identities=19% Similarity=0.160 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCc-eE--eCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMT-DF--INPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.+++|+|+ |.+|+..+..+...|+ +|+++++++++.+.. +..+.. .+ .|..+ .+++...+.+... .
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAAL 82 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 9999999999999999 898888887655543 222322 12 24433 1222222322221 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|.++.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 379999999875
No 197
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0096 Score=46.53 Aligned_cols=80 Identities=18% Similarity=0.224 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcC---CceEe--CCCCCCCchHHHHHHHhhC-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFG---MTDFI--NPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g---~~~v~--~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
++.+++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +.+. .-+.+ |..+ ..++...+.++.. ..
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD--EADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence 3678999987 9999999988888899 899998887665543 3332 11122 3332 2333333433321 12
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
++|++|++.|.
T Consensus 82 ~~d~vi~~ag~ 92 (237)
T PRK07326 82 GLDVLIANAGV 92 (237)
T ss_pred CCCEEEECCCC
Confidence 79999998764
No 198
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=97.11 E-value=0.0049 Score=48.35 Aligned_cols=104 Identities=17% Similarity=0.177 Sum_probs=67.1
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhh
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQG-AAKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGIT 137 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~ 137 (254)
...+..+..+||-+|.| +|..++.+++.++ ..+|+.++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~l~ 137 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQLL 137 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHHHH
Confidence 34556677899999864 3666666777653 3489999999988888765 34322222222 44445555442
Q ss_pred C---CCCccEEEEcCCC---hhHHHHHHHHcccCCcEEEE
Q 025336 138 H---GMGVDYCFECTGV---PSLLSEALETTKVGKGKVIV 171 (254)
Q Consensus 138 ~---~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~ 171 (254)
. ...||+||--... ...++.+++.++++ |.++.
T Consensus 138 ~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~ 176 (234)
T PLN02781 138 NNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAF 176 (234)
T ss_pred hCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEE
Confidence 2 2479999944322 33577889999999 98765
No 199
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.10 E-value=0.0021 Score=51.59 Aligned_cols=44 Identities=20% Similarity=0.267 Sum_probs=39.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA 112 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~ 112 (254)
++.+++|+|+|+.+.+++.-++..|+.+++++.|+.+|.+.+.+
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 57899999999999999999999998789999999988777654
No 200
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.10 E-value=0.0093 Score=44.14 Aligned_cols=98 Identities=20% Similarity=0.246 Sum_probs=63.9
Q ss_pred cccccchhhhhhHHHHHhcCCCCCCEEEEEcCCH-HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCC
Q 025336 47 ASFLSCGFTTGFGAAWKEAEVEKGSSVAVLGLGT-VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEP 125 (254)
Q Consensus 47 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~-~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~ 125 (254)
....|+...++...+.....--.+.+|||+|+|. +|..++..++..|+ +|+++.++.
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~--------------------- 78 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT--------------------- 78 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------
Confidence 3445555445555444443345789999999986 59999999999999 787775542
Q ss_pred CchHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCC
Q 025336 126 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 126 ~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 176 (254)
+++.+.+ ..+|+||.+++.+..+.. ..+.++ -.++.++.+.
T Consensus 79 -~~l~~~l------~~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 79 -KNLKEHT------KQADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred -hhHHHHH------hhCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 1222222 178999999998643332 245665 6777777654
No 201
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0061 Score=48.41 Aligned_cols=82 Identities=17% Similarity=0.233 Sum_probs=51.4
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHc-CCCeEEEEcCCccc-HHH----HHhcCC-c-eE--eCCCCCCCchHHHHHHH
Q 025336 67 VEKGSSVAVLGL-GTVGLGAVDGARMQ-GAAKIIGIDKNPWK-KEK----GEAFGM-T-DF--INPDDEPNKSISELVKG 135 (254)
Q Consensus 67 ~~~~~~vlI~G~-g~~G~~~~~~a~~~-g~~~v~~v~~~~~~-~~~----~~~~g~-~-~v--~~~~~~~~~~~~~~i~~ 135 (254)
+..+.++||+|+ |++|..+++-+... |+ +|+++++++++ .+. ++..+. . ++ .|..+ ..+..+.+++
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~~ 81 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD--TDSHPKVIDA 81 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC--hHHHHHHHHH
Confidence 456778999987 99999999876666 47 89999888765 333 233332 1 22 23332 2333333444
Q ss_pred hhCCCCccEEEEcCCC
Q 025336 136 ITHGMGVDYCFECTGV 151 (254)
Q Consensus 136 ~~~~~~~d~v~d~~g~ 151 (254)
.....++|+++.+.|.
T Consensus 82 ~~~~g~id~li~~ag~ 97 (253)
T PRK07904 82 AFAGGDVDVAIVAFGL 97 (253)
T ss_pred HHhcCCCCEEEEeeec
Confidence 3332389999987764
No 202
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0038 Score=49.54 Aligned_cols=80 Identities=19% Similarity=0.269 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcCCce-EeCCCCCCCchHHHHHHHhh-CCCCccE
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFGMTD-FINPDDEPNKSISELVKGIT-HGMGVDY 144 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~i~~~~-~~~~~d~ 144 (254)
++.+|+|+|+ |.+|..+++.+...|+ +|+++++++.+.+.. .+++... ..|..+ .+.....+.+.. ...++|.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4789999987 9999999999999999 899998887765544 3344322 224433 122333333321 1137899
Q ss_pred EEEcCCC
Q 025336 145 CFECTGV 151 (254)
Q Consensus 145 v~d~~g~ 151 (254)
++.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998863
No 203
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0047 Score=49.34 Aligned_cols=80 Identities=18% Similarity=0.204 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-c----CCc-e--EeCCCCCCCchHHHHHHHhhCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-F----GMT-D--FINPDDEPNKSISELVKGITHG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~----g~~-~--v~~~~~~~~~~~~~~i~~~~~~ 139 (254)
++.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ + +.. . ..|..+ .++....+.+...-
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence 4678999987 8999999999999999 89999888776654432 1 322 1 223333 23333334433222
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++++.|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 379999998874
No 204
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.08 E-value=0.0042 Score=52.86 Aligned_cols=75 Identities=15% Similarity=0.096 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
-.+.+|||+|+|.+|.+++..+...|+.+++++.++.++.+.+ ..++...++.+. .+.+.. ..+|+||
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---------~l~~~l--~~aDiVI 247 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---------ELPQLI--KKADIII 247 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---------HHHHHh--ccCCEEE
Confidence 3578899999999999999999999987899998987776554 445422233221 122211 2699999
Q ss_pred EcCCChh
Q 025336 147 ECTGVPS 153 (254)
Q Consensus 147 d~~g~~~ 153 (254)
+|++.+.
T Consensus 248 ~aT~a~~ 254 (414)
T PRK13940 248 AAVNVLE 254 (414)
T ss_pred ECcCCCC
Confidence 9999864
No 205
>PRK08017 oxidoreductase; Provisional
Probab=97.07 E-value=0.0046 Score=48.94 Aligned_cols=77 Identities=22% Similarity=0.352 Sum_probs=53.8
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceE-eCCCCCCCchHHH---HHHHhhCCCCccEE
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDF-INPDDEPNKSISE---LVKGITHGMGVDYC 145 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~---~i~~~~~~~~~d~v 145 (254)
+++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+++.+...+ .|..+ ...+.+ .+.+...+ .+|.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~-~~~~i 78 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDN-RLYGL 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCC-CCeEE
Confidence 47999997 9999999999999999 89999999888887777765433 34433 122222 22222223 78999
Q ss_pred EEcCCC
Q 025336 146 FECTGV 151 (254)
Q Consensus 146 ~d~~g~ 151 (254)
+.+.|.
T Consensus 79 i~~ag~ 84 (256)
T PRK08017 79 FNNAGF 84 (256)
T ss_pred EECCCC
Confidence 988763
No 206
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.07 E-value=0.0031 Score=46.81 Aligned_cols=104 Identities=21% Similarity=0.250 Sum_probs=66.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceE-eCCCCC-C------------CchHHHHHHH
Q 025336 70 GSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDF-INPDDE-P------------NKSISELVKG 135 (254)
Q Consensus 70 ~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-~~~~~~-~------------~~~~~~~i~~ 135 (254)
..+|+|+|+|.+|+.|+++++.+|+ +|+..+...++.+..+..+...+ +++.+. . +......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3689999999999999999999999 99999999888888888776543 221110 0 1223333333
Q ss_pred hhCCCCccEEEEcC--CChh----HHHHHHHHcccCCcEEEEEccCCC
Q 025336 136 ITHGMGVDYCFECT--GVPS----LLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 136 ~~~~~~~d~v~d~~--g~~~----~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
... .+|+++.+. .+.. ..+..++.++++ ..++++....+
T Consensus 99 ~i~--~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~g 143 (168)
T PF01262_consen 99 FIA--PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQG 143 (168)
T ss_dssp HHH--H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT
T ss_pred HHh--hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCC
Confidence 222 678888533 1211 134667788887 77888765443
No 207
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.07 E-value=0.016 Score=44.30 Aligned_cols=108 Identities=25% Similarity=0.310 Sum_probs=68.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 147 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d 147 (254)
+|.+++|+|.|.+|..+++.+...|+ +|++.+.++++.+.+++ +|+. .++..+ +.. ..+|+++-
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~------------l~~-~~~Dv~vp 91 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE------------IYS-VDADVFAP 91 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh------------hcc-ccCCEEEe
Confidence 67899999999999999999999999 99999988877766544 4643 333221 111 16899997
Q ss_pred cCCChhHHHHHHHHcccCCcEEEEEccCCCceee-ccH-HHHHhCCCEEEe
Q 025336 148 CTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVP-LNV-IALACGGRTLKG 196 (254)
Q Consensus 148 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~-~~~~~~~~~i~g 196 (254)
|......-...++.++. +++.-+. .. +++ ... ..+..+++.+.+
T Consensus 92 ~A~~~~I~~~~~~~l~~---~~v~~~A-N~-~~~~~~~~~~L~~~Gi~~~P 137 (200)
T cd01075 92 CALGGVINDDTIPQLKA---KAIAGAA-NN-QLADPRHGQMLHERGILYAP 137 (200)
T ss_pred cccccccCHHHHHHcCC---CEEEECC-cC-ccCCHhHHHHHHHCCCEEeC
Confidence 66543344455566643 3333222 22 222 222 235567777766
No 208
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.06 E-value=0.01 Score=51.41 Aligned_cols=79 Identities=15% Similarity=0.228 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcc--cHHH-HHhcCCce-EeCCCCCCCchHHHHH-HHhhC-CCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPW--KKEK-GEAFGMTD-FINPDDEPNKSISELV-KGITH-GMG 141 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~--~~~~-~~~~g~~~-v~~~~~~~~~~~~~~i-~~~~~-~~~ 141 (254)
++.++||+|+ |++|...++.+...|+ +|+++++++. +.+. .++++... .+|..+ .+..+.+ ..... ..+
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~---~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA---PDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHHHHHhCCC
Confidence 5788999987 9999999999999999 8888877432 2222 23445432 235444 3333322 22221 227
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|++|++.|.
T Consensus 285 id~vi~~AG~ 294 (450)
T PRK08261 285 LDIVVHNAGI 294 (450)
T ss_pred CCEEEECCCc
Confidence 9999999883
No 209
>PRK00536 speE spermidine synthase; Provisional
Probab=97.05 E-value=0.0025 Score=50.55 Aligned_cols=98 Identities=8% Similarity=-0.107 Sum_probs=66.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc--eEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT--DFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
.-++|||+|+|- |.++=.++|+. . +|+.++.+++-.+.++++-.. ..++... -.+...+.+... ..||+||
T Consensus 72 ~pk~VLIiGGGD-Gg~~REvLkh~-~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~-~~fDVII 144 (262)
T PRK00536 72 ELKEVLIVDGFD-LELAHQLFKYD-T-HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDI-KKYDLII 144 (262)
T ss_pred CCCeEEEEcCCc-hHHHHHHHCcC-C-eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccC-CcCCEEE
Confidence 347899998764 56677888876 3 899999999999888883211 1222222 222222333222 3899998
Q ss_pred -EcCCChhHHHHHHHHcccCCcEEEEEcc
Q 025336 147 -ECTGVPSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 147 -d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
|+.-.+...+.+.++|+++ |.++.=+.
T Consensus 145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred EcCCCChHHHHHHHHhcCCC-cEEEECCC
Confidence 7676666778999999999 98876543
No 210
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.01 Score=49.27 Aligned_cols=80 Identities=16% Similarity=0.124 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce---EeCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD---FINPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~---v~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.+++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.|... ..|..+ .+++...+.+... -
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence 4678999987 9999999999989999 899998887766543 2345432 124443 1223333322211 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|++|++.|.
T Consensus 84 g~iD~lInnAg~ 95 (334)
T PRK07109 84 GPIDTWVNNAMV 95 (334)
T ss_pred CCCCEEEECCCc
Confidence 279999999874
No 211
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.04 E-value=0.0053 Score=51.99 Aligned_cols=90 Identities=22% Similarity=0.274 Sum_probs=56.7
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCCcccHHHHHh--cCC--c-eEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 73 VAVLGLGTVGLGAVDGARMQGAA-KIIGIDKNPWKKEKGEA--FGM--T-DFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 73 vlI~G~g~~G~~~~~~a~~~g~~-~v~~v~~~~~~~~~~~~--~g~--~-~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
|+|+|+|.+|..+++.+...+-. +|++.+++.++.+.+.+ .+. . ..+|..+ ..+ +.++.. +.|+|+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~-l~~~~~--~~dvVi 72 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----PES-LAELLR--GCDVVI 72 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----HHH-HHHHHT--TSSEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----HHH-HHHHHh--cCCEEE
Confidence 78999999999999998877643 79999999999777653 221 1 2334333 222 444433 569999
Q ss_pred EcCCChhHHHHHHHHcccCCcEEEE
Q 025336 147 ECTGVPSLLSEALETTKVGKGKVIV 171 (254)
Q Consensus 147 d~~g~~~~~~~~~~~l~~~~G~~v~ 171 (254)
+|+|.......+..++..+ -.++.
T Consensus 73 n~~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 73 NCAGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp E-SSGGGHHHHHHHHHHHT--EEEE
T ss_pred ECCccchhHHHHHHHHHhC-CCeec
Confidence 9999764444455556666 67777
No 212
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.015 Score=46.40 Aligned_cols=80 Identities=18% Similarity=0.181 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcCCc-eE--eCCCCCCCchHHHHHHHhhC-CCCc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFGMT-DF--INPDDEPNKSISELVKGITH-GMGV 142 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~~~~ 142 (254)
++.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+ ++++.. .+ .|..+ .+++.+.+.+... ...+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999986 9999999999989999 999999987765544 344432 12 23333 2333333333211 1278
Q ss_pred cEEEEcCCC
Q 025336 143 DYCFECTGV 151 (254)
Q Consensus 143 d~v~d~~g~ 151 (254)
|+++++.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998874
No 213
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.04 E-value=0.0086 Score=48.42 Aligned_cols=42 Identities=19% Similarity=0.231 Sum_probs=37.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG 110 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~ 110 (254)
.+.+|+|+|+|++|.+++..+...|++++++++++.++.+.+
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 467899999999999999999999998899999998877755
No 214
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.02 E-value=0.0079 Score=48.44 Aligned_cols=140 Identities=22% Similarity=0.335 Sum_probs=81.7
Q ss_pred cceeeEEecCCceEEcCCCCCccccccccchhhhhhHHHHH-hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc
Q 025336 23 TWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGFGAAWK-EAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGID 101 (254)
Q Consensus 23 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~ 101 (254)
+|.+|..-....++++.+++.|-.+ ....|.+. |.. ...++++.+||=+|.|+ |.+++.. ..+|+.+|+++|
T Consensus 120 sw~~~~~~~~~~~i~lDPGlAFGTG----~HpTT~lc-L~~Le~~~~~g~~vlDvGcGS-GILaIAa-~kLGA~~v~g~D 192 (300)
T COG2264 120 SWREYPEPSDELNIELDPGLAFGTG----THPTTSLC-LEALEKLLKKGKTVLDVGCGS-GILAIAA-AKLGAKKVVGVD 192 (300)
T ss_pred CCccCCCCCCceEEEEccccccCCC----CChhHHHH-HHHHHHhhcCCCEEEEecCCh-hHHHHHH-HHcCCceEEEec
Confidence 4666543334566777777766433 33333332 221 22345899999998764 5555543 456887899999
Q ss_pred CCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCCh---hHHHHHHHHcccCCcEEEEEcc
Q 025336 102 KNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 102 ~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
.++--.+.+++ .+......... ... .....+..||+|+-.+=.. ...+...+.++|+ |+++..|.
T Consensus 193 iDp~AV~aa~eNa~~N~v~~~~~~~~---~~~----~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGI 264 (300)
T COG2264 193 IDPQAVEAARENARLNGVELLVQAKG---FLL----LEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGI 264 (300)
T ss_pred CCHHHHHHHHHHHHHcCCchhhhccc---ccc----hhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEee
Confidence 99866655544 34332110110 111 1111224899999766322 2456777889999 99999997
Q ss_pred CCC
Q 025336 175 GVD 177 (254)
Q Consensus 175 ~~~ 177 (254)
...
T Consensus 265 l~~ 267 (300)
T COG2264 265 LED 267 (300)
T ss_pred hHh
Confidence 654
No 215
>PRK04457 spermidine synthase; Provisional
Probab=97.01 E-value=0.0098 Score=47.50 Aligned_cols=94 Identities=13% Similarity=0.134 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhc-CC----c--eEeCCCCCCCchHHHHHHHhhCCC
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAF-GM----T--DFINPDDEPNKSISELVKGITHGM 140 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~-g~----~--~v~~~~~~~~~~~~~~i~~~~~~~ 140 (254)
.+..+||++|.|+ |.++..+++.....++++++.+++-.+.++++ +. . .++. .|..+.+.+. . .
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~-~ 135 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-R-H 135 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-C-C
Confidence 3457899999875 77888888876544899999999999888764 21 1 1221 3444445433 2 3
Q ss_pred CccEEE-EcCCC---------hhHHHHHHHHcccCCcEEEE
Q 025336 141 GVDYCF-ECTGV---------PSLLSEALETTKVGKGKVIV 171 (254)
Q Consensus 141 ~~d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~ 171 (254)
.||+|+ |.... ...+..+.+.|+++ |.++.
T Consensus 136 ~yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 136 STDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred CCCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 799998 44221 24678888999999 99887
No 216
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.01 E-value=0.007 Score=47.27 Aligned_cols=35 Identities=37% Similarity=0.465 Sum_probs=31.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 70 GSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 70 ~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
..+|+|+|.|++|..++..+-+.|..+++.+|.+.
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 46899999999999999999999999999998764
No 217
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=97.00 E-value=0.0097 Score=46.48 Aligned_cols=108 Identities=18% Similarity=0.190 Sum_probs=74.9
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhc----CCceEeCCCCCCCchHHHHHHHh
Q 025336 61 AWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAF----GMTDFINPDDEPNKSISELVKGI 136 (254)
Q Consensus 61 l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~i~~~ 136 (254)
+....++++|++||=+|+| +|-.+..+++..|..+|+++|.++..++.+++- |... +..-. .+.. .+. +
T Consensus 43 ~i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~---~dAe-~LP-f 115 (238)
T COG2226 43 LISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV---GDAE-NLP-F 115 (238)
T ss_pred HHHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE---echh-hCC-C
Confidence 4455566689999988776 499999999999877999999999998888652 2221 11111 1111 111 2
Q ss_pred hCCCCccEEEEcCCC------hhHHHHHHHHcccCCcEEEEEccCCC
Q 025336 137 THGMGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 137 ~~~~~~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
....||++.-+.|- +..+..+.|.++|+ |+++++.....
T Consensus 116 -~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 116 -PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred -CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 23378888765552 34688999999999 99998887654
No 218
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.99 E-value=0.017 Score=46.03 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
.+.+|+|.|.|++|..++..+-..|.++++.+|.+.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~ 64 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDD 64 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence 467899999999999999999999988999988763
No 219
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0043 Score=50.50 Aligned_cols=80 Identities=18% Similarity=0.181 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcCC--ce-E--eCCCCCCCchHHHHHHHhhC-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFGM--TD-F--INPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g~--~~-v--~~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
++.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++. .. . .|..+ .++....+.++.. ..
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 4789999986 9999999999999999 899998988776654 34442 11 1 34433 1233333333321 13
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
++|+++++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999984
No 220
>PRK14967 putative methyltransferase; Provisional
Probab=96.97 E-value=0.024 Score=44.13 Aligned_cols=100 Identities=18% Similarity=0.163 Sum_probs=64.4
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhhC
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
....++++++||-.|+|. |..++.+++. +..+|++++.+++..+.+++ .+....+.. .++.+.+ .
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~-----~d~~~~~----~ 98 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR-----GDWARAV----E 98 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE-----Cchhhhc----c
Confidence 345577889999999986 8888888875 55589999999988876654 343221211 2222211 2
Q ss_pred CCCccEEEEcCCC---------------------------hhHHHHHHHHcccCCcEEEEEcc
Q 025336 139 GMGVDYCFECTGV---------------------------PSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 139 ~~~~d~v~d~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
...||+|+....- ...+..+.+.++++ |+++.+-.
T Consensus 99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~~ 160 (223)
T PRK14967 99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQS 160 (223)
T ss_pred CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 2379999964210 11345677889999 99886543
No 221
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.017 Score=45.44 Aligned_cols=80 Identities=19% Similarity=0.289 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcCCce-E--eCCCCCCCchHHHHHHHhhC-CCCc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFGMTD-F--INPDDEPNKSISELVKGITH-GMGV 142 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g~~~-v--~~~~~~~~~~~~~~i~~~~~-~~~~ 142 (254)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++... . .|..+ ..+....+.++.. ..++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999987 9999999999999999 899998887665543 3445332 1 23322 1222222222211 1379
Q ss_pred cEEEEcCCC
Q 025336 143 DYCFECTGV 151 (254)
Q Consensus 143 d~v~d~~g~ 151 (254)
|+++++.|.
T Consensus 82 d~vi~~ag~ 90 (249)
T PRK06500 82 DAVFINAGV 90 (249)
T ss_pred CEEEECCCC
Confidence 999998874
No 222
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.97 E-value=0.0035 Score=47.79 Aligned_cols=99 Identities=21% Similarity=0.311 Sum_probs=62.1
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhc----CCceEeCCCCCCCchHHHHHHHhhC
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAF----GMTDFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
......++.+||-+|+|. |..+..+++. |. +|++++.+++-.+.+++. +... +.... .++. +..-
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~---~d~~----~~~~ 92 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDN-LHTAV---VDLN----NLTF 92 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEe---cChh----hCCc
Confidence 344455678899999875 7777778775 77 999999999877776542 2221 11111 1211 1111
Q ss_pred CCCccEEEEcCC----C----hhHHHHHHHHcccCCcEEEEEc
Q 025336 139 GMGVDYCFECTG----V----PSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 139 ~~~~d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~g 173 (254)
...||+|+.+.. . ...+..+.+.++++ |.++.+.
T Consensus 93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 236999997533 1 23567788889999 9865543
No 223
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0056 Score=48.56 Aligned_cols=80 Identities=20% Similarity=0.211 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCC-ceEe--CCCCCCCchHHHHHHHhh-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGM-TDFI--NPDDEPNKSISELVKGIT-HG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~-~~v~--~~~~~~~~~~~~~i~~~~-~~ 139 (254)
.+.+++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+.. .+. ..++ |..+ .+++...+.+.. ..
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD--YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHhc
Confidence 4789999986 9999999999998999 89999898877654432 121 1222 3332 233333333321 12
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 378999999883
No 224
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.96 E-value=0.0057 Score=43.56 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=30.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 70 GSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 70 ~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
..+|+|.|+|++|..++..+-..|.+++..+|.+.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence 46899999999999999999999998899987764
No 225
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.95 E-value=0.007 Score=47.72 Aligned_cols=79 Identities=22% Similarity=0.203 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce---EeCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD---FINPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~---v~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.++||+|+ |++|+.+++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ .....+.+.+... .
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD--EEDVEATFAQIAEDF 80 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4778999987 9999999999999999 899998887665543 2234331 223332 1223333333222 1
Q ss_pred CCccEEEEcCC
Q 025336 140 MGVDYCFECTG 150 (254)
Q Consensus 140 ~~~d~v~d~~g 150 (254)
.++|.+|++.|
T Consensus 81 ~~id~vi~~ag 91 (253)
T PRK08217 81 GQLNGLINNAG 91 (253)
T ss_pred CCCCEEEECCC
Confidence 37899999887
No 226
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.009 Score=46.31 Aligned_cols=77 Identities=21% Similarity=0.302 Sum_probs=52.1
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCce-EeCCCCCCCchHHHHHHHhhCCCCccEEEEc
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCFEC 148 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~ 148 (254)
.+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+... ..|..+ ...+...+.++. +.++|.++.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~~~~d~vi~~ 77 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLD-GEALDAAVYV 77 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhc-CCCCCEEEEC
Confidence 36889986 9999999988888899 8999988887777666555432 234443 122333333333 3379999998
Q ss_pred CCC
Q 025336 149 TGV 151 (254)
Q Consensus 149 ~g~ 151 (254)
.|.
T Consensus 78 ag~ 80 (222)
T PRK06953 78 AGV 80 (222)
T ss_pred CCc
Confidence 764
No 227
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.0058 Score=48.99 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=52.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcC-Cce-EeCCCCCCCchHHHHHHHhhC-CCCccE
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFG-MTD-FINPDDEPNKSISELVKGITH-GMGVDY 144 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g-~~~-v~~~~~~~~~~~~~~i~~~~~-~~~~d~ 144 (254)
+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +.++ ... ..|..+ ++++...+.+... ..++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 568999987 9999999988888899 899988888776554 3344 221 234443 2333333333321 137999
Q ss_pred EEEcCCC
Q 025336 145 CFECTGV 151 (254)
Q Consensus 145 v~d~~g~ 151 (254)
++++.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9999874
No 228
>PLN02476 O-methyltransferase
Probab=96.93 E-value=0.0089 Score=47.85 Aligned_cols=104 Identities=14% Similarity=0.265 Sum_probs=67.4
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhh
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQG-AAKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGIT 137 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~ 137 (254)
...+..+..+||-+|.+ +|..++.+++.++ -.+|+.++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~l~ 187 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKSMI 187 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHH
Confidence 34455677899999863 3666677777654 2279999999998888864 45432222222 44555555442
Q ss_pred ---CCCCccEEE-EcCCC--hhHHHHHHHHcccCCcEEEE
Q 025336 138 ---HGMGVDYCF-ECTGV--PSLLSEALETTKVGKGKVIV 171 (254)
Q Consensus 138 ---~~~~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~ 171 (254)
....||.|| |.--. ...++.+++.++++ |.++.
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~ 226 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVM 226 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEE
Confidence 123799998 44322 33578889999998 88765
No 229
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0075 Score=48.03 Aligned_cols=82 Identities=16% Similarity=0.242 Sum_probs=53.1
Q ss_pred CCCCCEEEEEcC-C-HHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-----cCCceE----eCCCCCCCchHHHHHHH
Q 025336 67 VEKGSSVAVLGL-G-TVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-----FGMTDF----INPDDEPNKSISELVKG 135 (254)
Q Consensus 67 ~~~~~~vlI~G~-g-~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-----~g~~~v----~~~~~~~~~~~~~~i~~ 135 (254)
+.++.++||+|+ | ++|.++++.+...|+ +|+++++++++.+...+ ++...+ .|..+ .++....+.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~ 90 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA 90 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence 345789999986 6 799999999999999 89998888766554322 343222 24433 1223333333
Q ss_pred hh-CCCCccEEEEcCCC
Q 025336 136 IT-HGMGVDYCFECTGV 151 (254)
Q Consensus 136 ~~-~~~~~d~v~d~~g~ 151 (254)
.. ...++|+++++.|.
T Consensus 91 ~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 21 11379999999984
No 230
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.92 E-value=0.0094 Score=40.29 Aligned_cols=90 Identities=24% Similarity=0.302 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 148 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~ 148 (254)
++.+|||+|+|.+|..-++.+...|+ +|++++... +..+ +.-... . ..+. ..-.++++|+-+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~-----~~~~------~~l~~~~lV~~a 67 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R-----REFE------EDLDGADLVFAA 67 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E-----SS-G------GGCTTESEEEE-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h-----hhHH------HHHhhheEEEec
Confidence 47899999999999999999999999 999997775 2222 111111 1 1121 112379999999
Q ss_pred CCChhHHHHHHHHcccCCcEEEEEccCCC
Q 025336 149 TGVPSLLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 149 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
.+.+..-+.+.+..+.. |.++.....+.
T Consensus 68 t~d~~~n~~i~~~a~~~-~i~vn~~D~p~ 95 (103)
T PF13241_consen 68 TDDPELNEAIYADARAR-GILVNVVDDPE 95 (103)
T ss_dssp SS-HHHHHHHHHHHHHT-TSEEEETT-CC
T ss_pred CCCHHHHHHHHHHHhhC-CEEEEECCCcC
Confidence 99885555666666666 88877765443
No 231
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.91 E-value=0.0038 Score=54.03 Aligned_cols=95 Identities=12% Similarity=0.122 Sum_probs=62.2
Q ss_pred HhcCCCCCCEEE----EEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc-eEeCCCCCCCchHHHHHHHh
Q 025336 63 KEAEVEKGSSVA----VLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT-DFINPDDEPNKSISELVKGI 136 (254)
Q Consensus 63 ~~~~~~~~~~vl----I~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~ 136 (254)
...+.++|+.+| |+|+ |++|.+++|+++..|+ +|+++...+.+....+..+.+ .++|.+. ....+.+...
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~ 102 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKAL 102 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHH
Confidence 345667888887 7764 9999999999999999 899886665544333333433 4555554 3333333322
Q ss_pred hCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC
Q 025336 137 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 137 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
. ..+...++.+.++ |+++.++....
T Consensus 103 ~---------------~~~~~~l~~l~~~-griv~i~s~~~ 127 (450)
T PRK08261 103 Y---------------EFFHPVLRSLAPC-GRVVVLGRPPE 127 (450)
T ss_pred H---------------HHHHHHHHhccCC-CEEEEEccccc
Confidence 1 2455667777887 88888876543
No 232
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0084 Score=47.76 Aligned_cols=80 Identities=18% Similarity=0.246 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-c--CC-ceE--eCCCCCCCchHHHHHHHhhCCCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-F--GM-TDF--INPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~--g~-~~v--~~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. + +. ... .|..+ ...............+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS--EAGREAVLARAREMGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHhcCC
Confidence 4678999986 9999999998888999 89999998776655432 1 21 112 23332 1222222222222237
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|.++.+.|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 233
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0051 Score=48.90 Aligned_cols=81 Identities=16% Similarity=0.150 Sum_probs=52.8
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCc--e--EeCCCCCCCchHHHHHHHhhC-CC
Q 025336 68 EKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMT--D--FINPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 68 ~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~--~--v~~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
-++.++||+|+ |.+|..+++.+...|+ +|++++++++..+.+.+ .... . ..|..+ +..+.+.+.+... -.
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVERFG 85 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence 46789999987 9999999999999999 89999988766655433 2211 1 223333 1222222322211 12
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
++|+++.+.|.
T Consensus 86 ~~d~vi~~ag~ 96 (264)
T PRK12829 86 GLDVLVNNAGI 96 (264)
T ss_pred CCCEEEECCCC
Confidence 79999998875
No 234
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=96.90 E-value=0.016 Score=46.62 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=67.3
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc-e--EeCCCCC-CCchHHHHHHHhhCCCCccEEE
Q 025336 71 SSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT-D--FINPDDE-PNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 71 ~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~-~--v~~~~~~-~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
.+|||+|+|. |..+=.++|+....++++|+.+++=.+.++++-.. . ..|.+-. -..|-.+.+++... +||+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~--~fDvIi 154 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE--KFDVII 154 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC--cCCEEE
Confidence 5899998653 66677888888888999999999999998874211 0 0011110 01455666665433 899998
Q ss_pred -EcCCC---------hhHHHHHHHHcccCCcEEEEE
Q 025336 147 -ECTGV---------PSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 147 -d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 172 (254)
|+... ...++.+-++|+++ |.++.-
T Consensus 155 ~D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 155 VDSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred EcCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 66544 33578889999999 988876
No 235
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.89 E-value=0.005 Score=49.34 Aligned_cols=98 Identities=21% Similarity=0.172 Sum_probs=70.7
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCC
Q 025336 71 SSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 150 (254)
Q Consensus 71 ~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g 150 (254)
.+|.|+|.|.+|.-++.+|..+|+ +|...+.+.+|+..+..+-...+-.... ++.++.+.+. ..|++|.++=
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~s-t~~~iee~v~------~aDlvIgaVL 240 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYS-TPSNIEEAVK------KADLVIGAVL 240 (371)
T ss_pred ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEc-CHHHHHHHhh------hccEEEEEEE
Confidence 458889999999999999999999 9999999999999887643333211111 1244444332 7899998662
Q ss_pred --Chh----HHHHHHHHcccCCcEEEEEccCCC
Q 025336 151 --VPS----LLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 151 --~~~----~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
+.. ..++.++.+.|+ +.++++....+
T Consensus 241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred ecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 211 356789999999 99998876654
No 236
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.89 E-value=0.0051 Score=49.02 Aligned_cols=79 Identities=24% Similarity=0.150 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhc-CCc-eE--eCCCCCCCchHHHHHHHhhC-CCCc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAF-GMT-DF--INPDDEPNKSISELVKGITH-GMGV 142 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~-g~~-~v--~~~~~~~~~~~~~~i~~~~~-~~~~ 142 (254)
++.+++|+|+ |++|..+++.+...|+ +|++++++.++.+.+++. +.. .. .|..+ ..+..+.+.+... -.++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999987 8999999999999999 899998887766665443 321 11 23332 1223333333221 1378
Q ss_pred cEEEEcCC
Q 025336 143 DYCFECTG 150 (254)
Q Consensus 143 d~v~d~~g 150 (254)
|+++++.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999886
No 237
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.87 E-value=0.0066 Score=47.85 Aligned_cols=80 Identities=19% Similarity=0.198 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcC--Cc-eE--eCCCCCCCchHHHHHHHh-hCCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFG--MT-DF--INPDDEPNKSISELVKGI-THGM 140 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g--~~-~v--~~~~~~~~~~~~~~i~~~-~~~~ 140 (254)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+. .+. .. .. .|..+ ..++...+.+. ....
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 80 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD--EADVEAAVAAALERFG 80 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 3568999987 9999999998888999 8999999987665542 222 11 11 23332 23333333322 1223
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
++|.+|.+.|.
T Consensus 81 ~~d~vi~~ag~ 91 (251)
T PRK07231 81 SVDILVNNAGT 91 (251)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 238
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.87 E-value=0.0077 Score=47.41 Aligned_cols=35 Identities=26% Similarity=0.392 Sum_probs=31.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 70 GSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 70 ~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
+.+|+|.|+|++|..+++.+...|.++++.+|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 47899999999999999999999998999887764
No 239
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.86 E-value=0.0065 Score=52.80 Aligned_cols=77 Identities=26% Similarity=0.401 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc---------------------ccHHHHHhcCCceEeCCCCCCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP---------------------WKKEKGEAFGMTDFINPDDEPNK 127 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~---------------------~~~~~~~~~g~~~v~~~~~~~~~ 127 (254)
.+.+|+|+|+|+.|+.++..++..|. +|++.+..+ ...+.++++|.+..++.... .
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~--~ 216 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG--R 216 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC--C
Confidence 57899999999999999999999999 888887654 23456677887655544320 1
Q ss_pred hHHHHHHHhhCCCCccEEEEcCCCh
Q 025336 128 SISELVKGITHGMGVDYCFECTGVP 152 (254)
Q Consensus 128 ~~~~~i~~~~~~~~~d~v~d~~g~~ 152 (254)
++ .+.+.. .++|.+|.++|..
T Consensus 217 ~~--~~~~~~--~~~D~vilAtGa~ 237 (467)
T TIGR01318 217 DI--SLDDLL--EDYDAVFLGVGTY 237 (467)
T ss_pred cc--CHHHHH--hcCCEEEEEeCCC
Confidence 11 111222 2799999999974
No 240
>PRK06398 aldose dehydrogenase; Validated
Probab=96.86 E-value=0.0048 Score=49.12 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhC-CCCccEEE
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITH-GMGVDYCF 146 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~-~~~~d~v~ 146 (254)
++.++||+|+ +++|...+..+...|+ +|+++++++++...+. ....|..+ ..+..+.+.+... ..++|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~----~~~~D~~~--~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYNDVD----YFKVDVSN--KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccCceE----EEEccCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999987 8999999999999999 8999888765432110 11224333 1333333333321 12799999
Q ss_pred EcCCC
Q 025336 147 ECTGV 151 (254)
Q Consensus 147 d~~g~ 151 (254)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98874
No 241
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.85 E-value=0.0066 Score=48.97 Aligned_cols=94 Identities=18% Similarity=0.154 Sum_probs=58.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
..+.+++|+|+|++|.+++..+...|+.+|+++.++.++.+.+. .++....+.. + .+.. + .-..+|+|+
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~----~--~~~~~DivI 190 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQ----E--ELADFDLII 190 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccch----h--ccccCCEEE
Confidence 35678999999999999999999999669999999988776553 3332110111 1 0010 1 112789999
Q ss_pred EcCCChhH-----HHHHHHHcccCCcEEEEE
Q 025336 147 ECTGVPSL-----LSEALETTKVGKGKVIVI 172 (254)
Q Consensus 147 d~~g~~~~-----~~~~~~~l~~~~G~~v~~ 172 (254)
+|+..... .+.....+.+. ..++++
T Consensus 191 naTp~g~~~~~~~~~~~~~~l~~~-~~v~Di 220 (278)
T PRK00258 191 NATSAGMSGELPLPPLPLSLLRPG-TIVYDM 220 (278)
T ss_pred ECCcCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence 99864310 01223456665 565555
No 242
>PRK01581 speE spermidine synthase; Validated
Probab=96.85 E-value=0.014 Score=48.42 Aligned_cols=103 Identities=11% Similarity=0.033 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC-----ceEeCCCCC--CCchHHHHHHHhhCCC
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM-----TDFINPDDE--PNKSISELVKGITHGM 140 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~-----~~v~~~~~~--~~~~~~~~i~~~~~~~ 140 (254)
....+|||+|+| .|.++..+++..+..+|++++.+++-.+.++.+.. ...++.... -..|..+.+.+. ..
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~--~~ 225 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSSP--SS 225 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHhc--CC
Confidence 344689999976 46677788887665699999999999998886310 000000000 013444555442 23
Q ss_pred CccEEE-EcCCC----------hhHHHHHHHHcccCCcEEEEEcc
Q 025336 141 GVDYCF-ECTGV----------PSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 141 ~~d~v~-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
.||+|| |.... ...+..+.+.|+++ |.++.-..
T Consensus 226 ~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 226 LYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 799998 43221 12467888899999 99877643
No 243
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.84 E-value=0.0049 Score=49.82 Aligned_cols=76 Identities=17% Similarity=0.056 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcCCce-EeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
++.+++|+|+|+.+++++..+...|+++++++.|+.+|.+.+. +++... +.... ..+.+.... ..+|+||
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~------~~~~~~~~~--~~~DiVI 195 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE------GDSGGLAIE--KAAEVLV 195 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc------chhhhhhcc--cCCCEEE
Confidence 5778999999999999999999999988999999988777653 333211 11110 001111111 2789999
Q ss_pred EcCCCh
Q 025336 147 ECTGVP 152 (254)
Q Consensus 147 d~~g~~ 152 (254)
+|+...
T Consensus 196 naTp~g 201 (282)
T TIGR01809 196 STVPAD 201 (282)
T ss_pred ECCCCC
Confidence 998753
No 244
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.84 E-value=0.0096 Score=43.35 Aligned_cols=96 Identities=27% Similarity=0.245 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHH-HHhcCCce-EeCCCCCCCchHHHHHHHhhCCCCccEE
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEK-GEAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYC 145 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~-~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~~~~~d~v 145 (254)
.++.+++|+|+|.+|...++.+...|..+|+++++++++.+. ++.++... .... .+..+. -.++|++
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~------~~~~Dvv 85 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY-----LDLEEL------LAEADLI 85 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee-----cchhhc------cccCCEE
Confidence 456889999999999999998888864389999888777655 44455321 0111 111111 1389999
Q ss_pred EEcCCChhH----HHHHHHHcccCCcEEEEEccC
Q 025336 146 FECTGVPSL----LSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 146 ~d~~g~~~~----~~~~~~~l~~~~G~~v~~g~~ 175 (254)
+.|++.... .......++++ ..++.++..
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~ 118 (155)
T cd01065 86 INTTPVGMKPGDELPLPPSLLKPG-GVVYDVVYN 118 (155)
T ss_pred EeCcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcC
Confidence 999876521 11122345665 666666544
No 245
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.84 E-value=0.01 Score=47.25 Aligned_cols=80 Identities=15% Similarity=0.138 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCc-eE--eCCCCCCCchHHHHHHHhh-CCCCc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMT-DF--INPDDEPNKSISELVKGIT-HGMGV 142 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~-~v--~~~~~~~~~~~~~~i~~~~-~~~~~ 142 (254)
++.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++.. .. .|..+ ..+....+.+.. ...++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcCCC
Confidence 4678999986 8999999999999999 89999998877766543 3321 12 23332 123333333321 12379
Q ss_pred cEEEEcCCC
Q 025336 143 DYCFECTGV 151 (254)
Q Consensus 143 d~v~d~~g~ 151 (254)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (263)
T PRK06200 82 DCFVGNAGI 90 (263)
T ss_pred CEEEECCCC
Confidence 999998873
No 246
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.83 E-value=0.012 Score=43.59 Aligned_cols=95 Identities=19% Similarity=0.306 Sum_probs=61.4
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCC
Q 025336 72 SVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 150 (254)
Q Consensus 72 ~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g 150 (254)
+|.|+|+ |-+|...++=|+..|. .|+++.+++.|+...+.. .++...- .+.......+ .++|+||++.+
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~---~i~q~Di---fd~~~~a~~l---~g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV---TILQKDI---FDLTSLASDL---AGHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc---eeecccc---cChhhhHhhh---cCCceEEEecc
Confidence 5788987 9999999999999999 999999999888653221 1111111 1111111112 39999999887
Q ss_pred Ch--h-------HHHHHHHHcccC-CcEEEEEccCC
Q 025336 151 VP--S-------LLSEALETTKVG-KGKVIVIGVGV 176 (254)
Q Consensus 151 ~~--~-------~~~~~~~~l~~~-~G~~v~~g~~~ 176 (254)
.. . ..+.++..++.. .-|+.++|..+
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 53 1 233456666653 24888888654
No 247
>PRK06484 short chain dehydrogenase; Validated
Probab=96.83 E-value=0.02 Score=50.56 Aligned_cols=105 Identities=17% Similarity=0.207 Sum_probs=68.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCce---EeCCCCCCCchHHHHHHHhhC-CCCc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMTD---FINPDDEPNKSISELVKGITH-GMGV 142 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~~---v~~~~~~~~~~~~~~i~~~~~-~~~~ 142 (254)
.+.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++... ..|..+ .++....+.+... ...+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 5678999986 8999999999999999 99999998877766543 44322 234433 2333333333321 1279
Q ss_pred cEEEEcCCChh--------------------------HHHHHHHHcccCCcEEEEEccCCC
Q 025336 143 DYCFECTGVPS--------------------------LLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 143 d~v~d~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
|++|++.|... ..+.++..+..+ |+++.+++..+
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~~ 404 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIAS 404 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchhh
Confidence 99999887420 123344455566 89988876543
No 248
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.024 Score=44.52 Aligned_cols=75 Identities=12% Similarity=0.069 Sum_probs=48.3
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc-e--EeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT-D--FINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+...+.. . ..|..+ .+++.+.+.+.. . ..|.++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~-~-~~d~~i 76 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQLP-F-IPELWI 76 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhcc-c-CCCEEE
Confidence 46899986 9999998888888899 899999988877766543311 1 223333 233334444332 2 457776
Q ss_pred EcCC
Q 025336 147 ECTG 150 (254)
Q Consensus 147 d~~g 150 (254)
.+.|
T Consensus 77 ~~ag 80 (240)
T PRK06101 77 FNAG 80 (240)
T ss_pred EcCc
Confidence 6665
No 249
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.83 E-value=0.0075 Score=49.73 Aligned_cols=81 Identities=19% Similarity=0.209 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-----cCC-c---eEeCCCCCCCchHHHHHHHhhC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-----FGM-T---DFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-----~g~-~---~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
.|.+++|+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ .+. . ...|..+ +..+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 5789999997 8999998888888899 89999999887765422 221 1 1223332 11334444544444
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
+..+|+++++.|.
T Consensus 130 ~~didilVnnAG~ 142 (320)
T PLN02780 130 GLDVGVLINNVGV 142 (320)
T ss_pred CCCccEEEEecCc
Confidence 4467799998863
No 250
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.82 E-value=0.024 Score=41.80 Aligned_cols=88 Identities=19% Similarity=0.237 Sum_probs=55.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCC
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 151 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~ 151 (254)
+|-++|.|.+|...++-+...|+ +|++.++++++.+.+.+.|+.. . .+..+.+. ..|+||-|+.+
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~-------~s~~e~~~------~~dvvi~~v~~ 67 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEV-A-------DSPAEAAE------QADVVILCVPD 67 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEE-E-------SSHHHHHH------HBSEEEE-SSS
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhh-h-------hhhhhHhh------cccceEeeccc
Confidence 68899999999999999899999 9999999999998888777432 2 11222221 44777777776
Q ss_pred hhHHHHHHH------HcccCCcEEEEEccC
Q 025336 152 PSLLSEALE------TTKVGKGKVIVIGVG 175 (254)
Q Consensus 152 ~~~~~~~~~------~l~~~~G~~v~~g~~ 175 (254)
...++..+. .+.++ ..++.++..
T Consensus 68 ~~~v~~v~~~~~i~~~l~~g-~iiid~sT~ 96 (163)
T PF03446_consen 68 DDAVEAVLFGENILAGLRPG-KIIIDMSTI 96 (163)
T ss_dssp HHHHHHHHHCTTHGGGS-TT-EEEEE-SS-
T ss_pred chhhhhhhhhhHHhhccccc-eEEEecCCc
Confidence 444444333 34444 455555443
No 251
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.011 Score=48.17 Aligned_cols=80 Identities=18% Similarity=0.230 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCc-eE--eCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMT-DF--INPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
.+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+.+ .+.. .+ .|..+ .++..+.+.++.. .
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD--LDAVDALVADVEKRI 115 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 3578999986 9999999998888899 99999998876654432 2322 12 23332 1333333332211 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++++.|.
T Consensus 116 g~id~li~~AG~ 127 (293)
T PRK05866 116 GGVDILINNAGR 127 (293)
T ss_pred CCCCEEEECCCC
Confidence 279999999874
No 252
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.009 Score=47.64 Aligned_cols=79 Identities=11% Similarity=0.063 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCc-eE--eCCCCCCCchH-HHHHHHhhC-
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMT-DF--INPDDEPNKSI-SELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~-~~~i~~~~~- 138 (254)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ .+.. .+ .|..+ .+. .+.+.+...
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~ 84 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH---PEATAGLAGQAVEA 84 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC---HHHHHHHHHHHHHH
Confidence 4788999987 8999999999998999 99999998766554322 2322 12 34443 332 222332211
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
..++|++|++.|.
T Consensus 85 ~~~id~vi~~Ag~ 97 (263)
T PRK07814 85 FGRLDIVVNNVGG 97 (263)
T ss_pred cCCCCEEEECCCC
Confidence 1379999998873
No 253
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.80 E-value=0.015 Score=46.89 Aligned_cols=43 Identities=23% Similarity=0.206 Sum_probs=37.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE 111 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~ 111 (254)
++.+++|+|+|+.+++++..+...|+++++++.++.++.+.+.
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 4678999999999999998888899988999999988776653
No 254
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=96.80 E-value=0.0038 Score=47.84 Aligned_cols=103 Identities=20% Similarity=0.255 Sum_probs=66.6
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhhCC
Q 025336 65 AEVEKGSSVAVLGLGTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGITHG 139 (254)
Q Consensus 65 ~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~ 139 (254)
.+.....+||-+|.+ +|..++.+|+.+.- .+|+.++.++++.+.+++ .|...-+.... .+..+.+.++...
T Consensus 41 ~~~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~---gda~~~l~~l~~~ 116 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE---GDALEVLPELAND 116 (205)
T ss_dssp HHHHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE---S-HHHHHHHHHHT
T ss_pred HHhcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE---eccHhhHHHHHhc
Confidence 334456789999964 37888888886642 399999999999888865 35322222222 4455555554322
Q ss_pred ---CCccEEE-EcCCC--hhHHHHHHHHcccCCcEEEEE
Q 025336 140 ---MGVDYCF-ECTGV--PSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 140 ---~~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~ 172 (254)
..||+|| |+--. ...++.++++++++ |.++.=
T Consensus 117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~D 154 (205)
T PF01596_consen 117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIAD 154 (205)
T ss_dssp TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEc
Confidence 3799999 65433 23477888999998 876653
No 255
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.037 Score=44.37 Aligned_cols=77 Identities=18% Similarity=0.233 Sum_probs=48.9
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce----EeCCCCCCCchHHHHHHHhh-CCCC
Q 025336 72 SVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD----FINPDDEPNKSISELVKGIT-HGMG 141 (254)
Q Consensus 72 ~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~----v~~~~~~~~~~~~~~i~~~~-~~~~ 141 (254)
+++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ ..+....+.+.. ...+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence 6899987 9999999998888999 888888877654433 2234321 234443 122222222221 1237
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|+++++.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 256
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.79 E-value=0.016 Score=48.95 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKN 103 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~ 103 (254)
.+.+|+|+|+|++|..++..+...|.++++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999899999887
No 257
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.79 E-value=0.01 Score=47.71 Aligned_cols=80 Identities=15% Similarity=0.271 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCceEe--CCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGL-G--TVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTDFI--NPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~-g--~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v~--~~~~~~~~~~~~~i~~~~~- 138 (254)
++.++||+|+ + ++|.+.++.+...|+ +|+.++++++..+.+ ++.|....+ |..+ .++....+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~ 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence 4678999987 4 899999999889999 888887765322222 234533222 3333 2333333333322
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
...+|+++++.|.
T Consensus 83 ~g~iD~lVnnAG~ 95 (271)
T PRK06505 83 WGKLDFVVHAIGF 95 (271)
T ss_pred hCCCCEEEECCcc
Confidence 1379999998873
No 258
>PRK06196 oxidoreductase; Provisional
Probab=96.78 E-value=0.011 Score=48.57 Aligned_cols=80 Identities=19% Similarity=0.287 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcC-Cce-EeCCCCCCCchHHHHHHHhhC-CCCcc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFG-MTD-FINPDDEPNKSISELVKGITH-GMGVD 143 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g-~~~-v~~~~~~~~~~~~~~i~~~~~-~~~~d 143 (254)
.+.++||+|+ |++|..+++.+...|+ +|++++++.++.+.+. ++. ... ..|..+ .+++...+.++.. ..++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 4678999987 8999999998888999 8999988877665432 222 211 124333 2333333333322 23799
Q ss_pred EEEEcCCC
Q 025336 144 YCFECTGV 151 (254)
Q Consensus 144 ~v~d~~g~ 151 (254)
+++++.|.
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99998873
No 259
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.77 E-value=0.014 Score=46.21 Aligned_cols=36 Identities=28% Similarity=0.399 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
...+|+|.|+|++|..++..+...|.+++..+|.+.
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 457899999999999999999999998998887764
No 260
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.03 Score=45.07 Aligned_cols=78 Identities=21% Similarity=0.222 Sum_probs=49.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce-E--eCCCCCCCchHHHHHHHhhCCCCc
Q 025336 70 GSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD-F--INPDDEPNKSISELVKGITHGMGV 142 (254)
Q Consensus 70 ~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~i~~~~~~~~~ 142 (254)
+++++|.|+|++|..+++.+. .|+ +|+.+++++++.+.+ +..+... . .|..+ .++....+.+.....++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence 356888898899999888875 798 899998887655433 2223221 2 24433 23334444333222379
Q ss_pred cEEEEcCCC
Q 025336 143 DYCFECTGV 151 (254)
Q Consensus 143 d~v~d~~g~ 151 (254)
|+++++.|.
T Consensus 78 d~li~nAG~ 86 (275)
T PRK06940 78 TGLVHTAGV 86 (275)
T ss_pred CEEEECCCc
Confidence 999999984
No 261
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.01 Score=47.03 Aligned_cols=80 Identities=15% Similarity=0.160 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCce---EeCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMTD---FINPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~~---v~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ..+... ..|..+ .++..+.+.+... -
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4788999987 8999999999999999 8999988877665442 223221 223333 2333333333221 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++++.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 279999998874
No 262
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.76 E-value=0.012 Score=46.74 Aligned_cols=80 Identities=15% Similarity=0.221 Sum_probs=49.5
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCceEe--CCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGLG---TVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTDFI--NPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~g---~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v~--~~~~~~~~~~~~~i~~~~~- 138 (254)
++.++||+|++ ++|.++++.+...|+ +|+.++++++..+.+ ++++...++ |-.+ .++....+.+...
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 85 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE--PGQLEAVFARIAEE 85 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC--HHHHHHHHHHHHHH
Confidence 46789999863 899999998888999 888888875432222 233332222 3332 2333333333322
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
..++|+++++.|.
T Consensus 86 ~g~ld~lv~nAg~ 98 (258)
T PRK07533 86 WGRLDFLLHSIAF 98 (258)
T ss_pred cCCCCEEEEcCcc
Confidence 1279999998863
No 263
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.76 E-value=0.011 Score=48.90 Aligned_cols=36 Identities=19% Similarity=0.372 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
.+.+|+|+|+|++|..+++.+-..|.+++..+|.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 356899999999999999999999998899898874
No 264
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=96.76 E-value=0.02 Score=45.63 Aligned_cols=99 Identities=21% Similarity=0.206 Sum_probs=66.4
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc-eEeCCCCCCCchHHHHHHHhhCCCC
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT-DFINPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
....+.++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++.... .++. .+.. .+.....
T Consensus 25 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~------~d~~----~~~~~~~ 93 (258)
T PRK01683 25 ARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE------ADIA----SWQPPQA 93 (258)
T ss_pred hhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE------Cchh----ccCCCCC
Confidence 455677889999998764 77778888876434999999999888887764322 1221 1111 1112238
Q ss_pred ccEEEEcCC-----C-hhHHHHHHHHcccCCcEEEEEc
Q 025336 142 VDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 142 ~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g 173 (254)
||+|+-... . ...+..+.+.|+++ |.++...
T Consensus 94 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 94 LDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred ccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 999985432 1 23678888999999 9987753
No 265
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.76 E-value=0.025 Score=45.50 Aligned_cols=95 Identities=19% Similarity=0.277 Sum_probs=65.2
Q ss_pred cccchhhhhhHHHHHhcC-CCCCCEEEEEcCC-HHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCC
Q 025336 49 FLSCGFTTGFGAAWKEAE-VEKGSSVAVLGLG-TVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPN 126 (254)
Q Consensus 49 ~~~~~~~ta~~~l~~~~~-~~~~~~vlI~G~g-~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~ 126 (254)
.+||+....+..+. ..+ --.|.+++|+|.| .+|.-++.++...|+ +|++..+. .
T Consensus 137 ~~PcTp~ai~~ll~-~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~-------------------t--- 192 (286)
T PRK14175 137 FVPCTPLGIMEILK-HADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSR-------------------S--- 192 (286)
T ss_pred CCCCcHHHHHHHHH-HcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCC-------------------c---
Confidence 45665555555553 333 3378999999985 599999999999999 77776322 1
Q ss_pred chHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCC
Q 025336 127 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 127 ~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 176 (254)
.++.+.+ +..|++|.++|.+..+.. ..++++ ..++.+|...
T Consensus 193 ~~l~~~~------~~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 193 KDMASYL------KDADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred hhHHHHH------hhCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 2222222 278999999998755544 457887 8888888753
No 266
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.015 Score=46.82 Aligned_cols=79 Identities=15% Similarity=0.182 Sum_probs=52.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcC-Cce---EeCCCCCCCchHHHHHHHhhC-CCCcc
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFG-MTD---FINPDDEPNKSISELVKGITH-GMGVD 143 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g-~~~---v~~~~~~~~~~~~~~i~~~~~-~~~~d 143 (254)
+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+.. ... ..|..+ .+.+...+.+... -.++|
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCCC
Confidence 567999987 9999999999888999 8999999887766554432 111 224433 1223333332211 12699
Q ss_pred EEEEcCCC
Q 025336 144 YCFECTGV 151 (254)
Q Consensus 144 ~v~d~~g~ 151 (254)
+++++.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999875
No 267
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.75 E-value=0.021 Score=44.65 Aligned_cols=35 Identities=26% Similarity=0.342 Sum_probs=31.2
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 70 GSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 70 ~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
..+|+|.|+|++|..++..+...|.++++.+|.+.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 57899999999999999999999998998886654
No 268
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.75 E-value=0.012 Score=45.04 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=58.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcc-cHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPW-KKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 147 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d 147 (254)
.|.+|||+|+|.+|..-++.+...|+ +|++++.... ....+.+.|.-..+. ++ -. ... + .++++||-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~---~~-~~d---l---~~~~lVi~ 75 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC---FD-ADI---L---EGAFLVIA 75 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC---CC-HHH---h---CCcEEEEE
Confidence 46799999999999999999999999 8888866543 223333334222221 21 11 111 1 27999999
Q ss_pred cCCChhHHHHHHHHcccCCcEEEEEc
Q 025336 148 CTGVPSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 148 ~~g~~~~~~~~~~~l~~~~G~~v~~g 173 (254)
+++.+..-..+....+.. |..|...
T Consensus 76 at~d~~ln~~i~~~a~~~-~ilvn~~ 100 (205)
T TIGR01470 76 ATDDEELNRRVAHAARAR-GVPVNVV 100 (205)
T ss_pred CCCCHHHHHHHHHHHHHc-CCEEEEC
Confidence 999874444555556666 7666443
No 269
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.73 E-value=0.011 Score=53.40 Aligned_cols=77 Identities=26% Similarity=0.360 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcc---------------------cHHHHHhcCCceEeCCCCCCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPW---------------------KKEKGEAFGMTDFINPDDEPNK 127 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~---------------------~~~~~~~~g~~~v~~~~~~~~~ 127 (254)
.+++|+|+|+|+.|+.++..++..|. +|++.++.+. +.++++++|.+..++..-....
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 8988877653 4556677887765554320001
Q ss_pred hHHHHHHHhhCCCCccEEEEcCCCh
Q 025336 128 SISELVKGITHGMGVDYCFECTGVP 152 (254)
Q Consensus 128 ~~~~~i~~~~~~~~~d~v~d~~g~~ 152 (254)
.+ .++. .++|.+|.++|..
T Consensus 388 ~~----~~l~--~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT--SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH--hcCCEEEEeCCCC
Confidence 12 1222 2799999999863
No 270
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.011 Score=46.83 Aligned_cols=73 Identities=14% Similarity=0.078 Sum_probs=48.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCce-E--eCCCCCCCchHHHHHHHhhCCCC
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTD-F--INPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~-v--~~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
+.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.++. .+... + .|..+ .+ .+.+...+ +
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~---~~~~~~~~-~ 73 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD---AI---DRAQAAEW-D 73 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC---HH---HHHHHhcC-C
Confidence 357999987 9999999999999999 89998887765544432 23221 1 23333 22 22222233 8
Q ss_pred ccEEEEcCC
Q 025336 142 VDYCFECTG 150 (254)
Q Consensus 142 ~d~v~d~~g 150 (254)
+|++|++.|
T Consensus 74 id~vi~~ag 82 (257)
T PRK09291 74 VDVLLNNAG 82 (257)
T ss_pred CCEEEECCC
Confidence 999999887
No 271
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.72 E-value=0.019 Score=41.32 Aligned_cols=33 Identities=30% Similarity=0.372 Sum_probs=29.3
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
+|+|.|+|++|...++.+...|.+++..+|.+.
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDT 33 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 489999999999999999999998899987663
No 272
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.72 E-value=0.014 Score=46.02 Aligned_cols=80 Identities=24% Similarity=0.303 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcc--cHHHHHhcCCc-eE--eCCCCCCCchHHHHHHHhhC-CCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPW--KKEKGEAFGMT-DF--INPDDEPNKSISELVKGITH-GMG 141 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~--~~~~~~~~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~~~ 141 (254)
++.++||+|+ |++|...++.+...|+ +|+.+++++. ..+.+++.+.. .. .|..+ .+++...+.+... ..+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 80 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD--IEAIKALVDSAVEEFGH 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHcCC
Confidence 4788999987 8999999998888999 8999887642 12223344432 12 23333 2334434433321 237
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|+++++.|.
T Consensus 81 ~d~li~~ag~ 90 (248)
T TIGR01832 81 IDILVNNAGI 90 (248)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 273
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.72 E-value=0.013 Score=48.20 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=60.3
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEe-CCCCCCCchHHHHHHHhhCCCCccEEEEcC
Q 025336 72 SVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT 149 (254)
Q Consensus 72 ~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~ 149 (254)
+|||+|+ |-+|..+++.+...|. +|.+++++.++...+...+...+. |..+ +.++...+ . ++|.||+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d--~~~l~~al----~--g~d~Vi~~~ 72 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL--PETLPPSF----K--GVTAIIDAS 72 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC--HHHHHHHH----C--CCCEEEECC
Confidence 6999987 9999999999999999 899998887665555555654332 3333 12222222 2 789999987
Q ss_pred CChh------------HHHHHHHHcccCCc--EEEEEccC
Q 025336 150 GVPS------------LLSEALETTKVGKG--KVIVIGVG 175 (254)
Q Consensus 150 g~~~------------~~~~~~~~l~~~~G--~~v~~g~~ 175 (254)
+... ....+++.++.. | +++.++..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~ 111 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSIL 111 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccc
Confidence 5311 113344555444 4 78877763
No 274
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.012 Score=46.67 Aligned_cols=80 Identities=18% Similarity=0.182 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCce--E--eCCCCCCCchHHHHHHHhhC-CCCc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTD--F--INPDDEPNKSISELVKGITH-GMGV 142 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~--v--~~~~~~~~~~~~~~i~~~~~-~~~~ 142 (254)
++.++||+|+ |.+|..+++.+...|+ +|+.++++++..+...+..... . .|..+ ..++...+.+... ..++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD--SQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999987 9999999998888999 8999988876554444432111 2 23332 2233333333211 1379
Q ss_pred cEEEEcCCC
Q 025336 143 DYCFECTGV 151 (254)
Q Consensus 143 d~v~d~~g~ 151 (254)
|.++.+.|.
T Consensus 91 d~vi~~ag~ 99 (255)
T PRK06841 91 DILVNSAGV 99 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 275
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.70 E-value=0.048 Score=43.39 Aligned_cols=79 Identities=14% Similarity=0.194 Sum_probs=48.1
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCc---ccHHHH-Hhc-CCc-e--EeCCCCCCCchHHHHHHHhh
Q 025336 69 KGSSVAVLGL---GTVGLGAVDGARMQGAAKIIGIDKNP---WKKEKG-EAF-GMT-D--FINPDDEPNKSISELVKGIT 137 (254)
Q Consensus 69 ~~~~vlI~G~---g~~G~~~~~~a~~~g~~~v~~v~~~~---~~~~~~-~~~-g~~-~--v~~~~~~~~~~~~~~i~~~~ 137 (254)
.+.+++|+|+ +++|.++++.+...|+ +|+.+.++. ++.+.+ +++ +.. . ..|..+ .++....+.++.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence 4678999986 5999999988888999 888886643 233333 223 211 1 123333 233333444332
Q ss_pred C-CCCccEEEEcCC
Q 025336 138 H-GMGVDYCFECTG 150 (254)
Q Consensus 138 ~-~~~~d~v~d~~g 150 (254)
. -.++|+++++.|
T Consensus 83 ~~~g~ld~lv~nag 96 (257)
T PRK08594 83 EEVGVIHGVAHCIA 96 (257)
T ss_pred HhCCCccEEEECcc
Confidence 2 137999999876
No 276
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=96.69 E-value=0.022 Score=44.97 Aligned_cols=103 Identities=17% Similarity=0.193 Sum_probs=67.3
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhhC
Q 025336 64 EAEVEKGSSVAVLGLGTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 64 ~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
..+..+..+||-+|.+ +|..++.+++.++. .+++.++.+++..+.+++ .|...-+.... .+..+.+.++..
T Consensus 74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~~l~~ 149 (247)
T PLN02589 74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLDQMIE 149 (247)
T ss_pred HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHHHHHh
Confidence 3444556789988863 47777788876632 289999999988888765 45322233333 455566655532
Q ss_pred ----CCCccEEE-EcCCC--hhHHHHHHHHcccCCcEEEE
Q 025336 139 ----GMGVDYCF-ECTGV--PSLLSEALETTKVGKGKVIV 171 (254)
Q Consensus 139 ----~~~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~ 171 (254)
...||+|| |+--. ...++.+++.++++ |.++.
T Consensus 150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 13899999 44422 23577888999998 87654
No 277
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.68 E-value=0.033 Score=36.91 Aligned_cols=76 Identities=18% Similarity=0.317 Sum_probs=51.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHcC---CCeEEEE-cCCcccHHHH-HhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 72 SVAVLGLGTVGLGAVDGARMQG---AAKIIGI-DKNPWKKEKG-EAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g---~~~v~~v-~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
+|.|+|+|.+|.+.++-....| . +|+.+ ++++++.+.+ ++++.. +.. .+..+.++ ..|++|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~-~~~------~~~~~~~~------~advvi 66 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQ-ATA------DDNEEAAQ------EADVVI 66 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTE-EES------EEHHHHHH------HTSEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccc-ccc------CChHHhhc------cCCEEE
Confidence 4778899999999999999888 6 78845 8999888876 456643 222 12333332 679999
Q ss_pred EcCCChhHHHHHHHHc
Q 025336 147 ECTGVPSLLSEALETT 162 (254)
Q Consensus 147 d~~g~~~~~~~~~~~l 162 (254)
-|+-.. .+...++.+
T Consensus 67 lav~p~-~~~~v~~~i 81 (96)
T PF03807_consen 67 LAVKPQ-QLPEVLSEI 81 (96)
T ss_dssp E-S-GG-GHHHHHHHH
T ss_pred EEECHH-HHHHHHHHH
Confidence 999876 445454443
No 278
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.67 E-value=0.049 Score=38.26 Aligned_cols=88 Identities=22% Similarity=0.281 Sum_probs=52.2
Q ss_pred EEEEcC-CHHHHHHHHHHHHcC--CCeEEEEcCCcc--cH-HHHHhcCCceEeCCCCCCCchHHHHHH------------
Q 025336 73 VAVLGL-GTVGLGAVDGARMQG--AAKIIGIDKNPW--KK-EKGEAFGMTDFINPDDEPNKSISELVK------------ 134 (254)
Q Consensus 73 vlI~G~-g~~G~~~~~~a~~~g--~~~v~~v~~~~~--~~-~~~~~~g~~~v~~~~~~~~~~~~~~i~------------ 134 (254)
|.|+|+ |++|..++++.+... + +|++...... ++ +.++++.+..+.-.+ +...+.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~----~~~~~~l~~~~~~~~~~~~v 75 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIAD----EEAYEELKKALPSKGPGIEV 75 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESS----HHHHHHHHHHHHHTTSSSEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcC----HHHHHHHHHHhhhcCCCCEE
Confidence 578898 999999999999887 6 7777655432 22 234567777665444 22222222
Q ss_pred --------HhhCCCCccEEEEcCCChhHHHHHHHHcccC
Q 025336 135 --------GITHGMGVDYCFECTGVPSLLSEALETTKVG 165 (254)
Q Consensus 135 --------~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~ 165 (254)
++.....+|+++.++.+...+.-.+..+..+
T Consensus 76 ~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g 114 (129)
T PF02670_consen 76 LSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG 114 (129)
T ss_dssp EESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred EeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence 2223236777777666655666666666654
No 279
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.65 E-value=0.018 Score=43.90 Aligned_cols=36 Identities=14% Similarity=0.351 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
...+|+|.|+|++|.-.+..+-..|.+++..+|.+.
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ 55 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRT 55 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCc
Confidence 357899999999999999999999998888887653
No 280
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.018 Score=45.00 Aligned_cols=79 Identities=16% Similarity=0.074 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCce-E--eCCCCCCCchHHHHHHHhhC--
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMTD-F--INPDDEPNKSISELVKGITH-- 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--~~~~~~~~~~~~~~i~~~~~-- 138 (254)
++.+++|.|+ +++|...+.-+...|+ +|+.+.+++++.+.+. +.+... . .|..+ .++....+.+...
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS--QESIRHLFDAIEQQF 80 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 8999999988888999 8999988887765432 334322 2 23332 2333333333322
Q ss_pred CCCccEEEEcCC
Q 025336 139 GMGVDYCFECTG 150 (254)
Q Consensus 139 ~~~~d~v~d~~g 150 (254)
+..+|+++++.|
T Consensus 81 g~~iD~li~nag 92 (227)
T PRK08862 81 NRAPDVLVNNWT 92 (227)
T ss_pred CCCCCEEEECCc
Confidence 227999999986
No 281
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.65 E-value=0.017 Score=47.99 Aligned_cols=36 Identities=19% Similarity=0.390 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
...+|+|+|+|++|..+++.+...|.+++..+|.+.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 356899999999999999999999999999998864
No 282
>PRK07574 formate dehydrogenase; Provisional
Probab=96.63 E-value=0.04 Score=46.44 Aligned_cols=45 Identities=22% Similarity=0.432 Sum_probs=36.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcC
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFG 114 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g 114 (254)
.|.+|.|+|.|.+|+.+++.++..|+ +|++.+++....+..+.+|
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 56789999999999999999999999 9999988764433333444
No 283
>PRK06128 oxidoreductase; Provisional
Probab=96.63 E-value=0.031 Score=45.55 Aligned_cols=80 Identities=18% Similarity=0.094 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccc--HH----HHHhcCCce-E--eCCCCCCCchHHHHHHHhhC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWK--KE----KGEAFGMTD-F--INPDDEPNKSISELVKGITH 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~--~~----~~~~~g~~~-v--~~~~~~~~~~~~~~i~~~~~ 138 (254)
.+.++||+|+ |++|..+++.+...|+ +|+.+.++.+. .+ .++..|... + .|..+ .....+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 130 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK 130 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence 4678999986 9999999998888999 88877554321 11 223344322 1 23333 1223333333221
Q ss_pred -CCCccEEEEcCCC
Q 025336 139 -GMGVDYCFECTGV 151 (254)
Q Consensus 139 -~~~~d~v~d~~g~ 151 (254)
-.++|++|++.|.
T Consensus 131 ~~g~iD~lV~nAg~ 144 (300)
T PRK06128 131 ELGGLDILVNIAGK 144 (300)
T ss_pred HhCCCCEEEECCcc
Confidence 1279999998873
No 284
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.015 Score=46.16 Aligned_cols=78 Identities=17% Similarity=0.164 Sum_probs=51.7
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cC-Cc-e--EeCCCCCCCchHHHHHHHhhC--CCCc
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FG-MT-D--FINPDDEPNKSISELVKGITH--GMGV 142 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g-~~-~--v~~~~~~~~~~~~~~i~~~~~--~~~~ 142 (254)
.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.. .+ .. . ..|..+ ..++.+.+.+... ..++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 46899987 9999999998888999 89999888877665533 22 11 1 234443 1333333333221 2379
Q ss_pred cEEEEcCCC
Q 025336 143 DYCFECTGV 151 (254)
Q Consensus 143 d~v~d~~g~ 151 (254)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999999874
No 285
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.013 Score=46.35 Aligned_cols=79 Identities=14% Similarity=0.136 Sum_probs=50.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCc-eEe--CCCCCCCchHHHHHHHhhC-CC
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMT-DFI--NPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~v~--~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
+.++||.|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+.. ..+ |..+ .+++...+.+... ..
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN--PEDVQKMVEQIDEKFG 77 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence 467999986 8999999999999999 89999888766554422 2322 222 3332 2333333333221 12
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
++|.++++.|.
T Consensus 78 ~id~lI~~ag~ 88 (252)
T PRK07677 78 RIDALINNAAG 88 (252)
T ss_pred CccEEEECCCC
Confidence 78999998873
No 286
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.014 Score=46.46 Aligned_cols=80 Identities=20% Similarity=0.220 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-----cCCce----EeCCCCCCCchHHHHHHHhhC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-----FGMTD----FINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-----~g~~~----v~~~~~~~~~~~~~~i~~~~~ 138 (254)
++.+++|+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ .+... ..|..+ .++..+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 4678999987 8999999999999999 89999998876654321 11111 124443 1233333333321
Q ss_pred -CCCccEEEEcCCC
Q 025336 139 -GMGVDYCFECTGV 151 (254)
Q Consensus 139 -~~~~d~v~d~~g~ 151 (254)
-.++|+++++.|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 1379999999874
No 287
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.60 E-value=0.018 Score=45.11 Aligned_cols=79 Identities=20% Similarity=0.241 Sum_probs=51.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce-E--eCCCCCCCchHHHHHHHhhC-CC
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD-F--INPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
+.++||+|+ |.+|...++.+...|. +|+++.+++++.+.. +..+... . .|..+ +..+.+.+.++.. -.
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence 468999987 9999999999888899 799998887765443 2334322 1 24333 2333343433321 12
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
.+|.++.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998864
No 288
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.60 E-value=0.027 Score=45.72 Aligned_cols=36 Identities=22% Similarity=0.340 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
++.+++|+|+|++|++++..+...|+++|+++.++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 467899999999999999888899996699998886
No 289
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.017 Score=45.03 Aligned_cols=80 Identities=19% Similarity=0.162 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHH----HHhcCCceE-eCCCCCCCchHHHHHHHhhC-CCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEK----GEAFGMTDF-INPDDEPNKSISELVKGITH-GMG 141 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~----~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~-~~~ 141 (254)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++... ++..+...+ .|..+ ..++...+.+... ..+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 3678999987 9999999998888899 89999887765432 222232221 23332 1333333332221 127
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|+++++.|.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 9999998773
No 290
>PLN02823 spermine synthase
Probab=96.59 E-value=0.021 Score=47.23 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc--eEeCCCCC--CCchHHHHHHHhhCCCCccE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT--DFINPDDE--PNKSISELVKGITHGMGVDY 144 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~--~v~~~~~~--~~~~~~~~i~~~~~~~~~d~ 144 (254)
..++|||+|+|. |..+..++++.+..+|++++.+++-.+.++++-.. ..++.... -..|....+++ . ...||+
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~-~~~yDv 179 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-R-DEKFDV 179 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-C-CCCccE
Confidence 346899998764 66667788877766899999999999998874311 01110000 01344455543 2 348999
Q ss_pred EE-EcCC----Ch-------hHHH-HHHHHcccCCcEEEEE
Q 025336 145 CF-ECTG----VP-------SLLS-EALETTKVGKGKVIVI 172 (254)
Q Consensus 145 v~-d~~g----~~-------~~~~-~~~~~l~~~~G~~v~~ 172 (254)
|| |... ++ ..++ .+.+.|+++ |.++.-
T Consensus 180 Ii~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 180 IIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EEecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 98 5432 11 1344 677889999 988754
No 291
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.019 Score=45.38 Aligned_cols=73 Identities=18% Similarity=0.312 Sum_probs=46.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCc-ccHHHHHhcCCce--EeCCCCCCCchHHHHHHHhhCCCCccE
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNP-WKKEKGEAFGMTD--FINPDDEPNKSISELVKGITHGMGVDY 144 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~-~~~~~~~~~g~~~--v~~~~~~~~~~~~~~i~~~~~~~~~d~ 144 (254)
.+.+++|+|+ |++|..+++.+...|+ +|+++++++ ++.+... .+... ..|..+ .+ .+.+.. + ++|+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~---~~---~~~~~~-~-~iDi 82 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECGK---EE---SLDKQL-A-SLDV 82 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCCC---HH---HHHHhc-C-CCCE
Confidence 3678999987 8999999999999999 899888775 2222111 11112 223332 22 222222 2 6999
Q ss_pred EEEcCCC
Q 025336 145 CFECTGV 151 (254)
Q Consensus 145 v~d~~g~ 151 (254)
++++.|.
T Consensus 83 lVnnAG~ 89 (245)
T PRK12367 83 LILNHGI 89 (245)
T ss_pred EEECCcc
Confidence 9999874
No 292
>PRK06194 hypothetical protein; Provisional
Probab=96.58 E-value=0.013 Score=47.26 Aligned_cols=79 Identities=18% Similarity=0.191 Sum_probs=50.1
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-h---cCCce-Ee--CCCCCCCchHHHHHHHhh-CCC
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-A---FGMTD-FI--NPDDEPNKSISELVKGIT-HGM 140 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~---~g~~~-v~--~~~~~~~~~~~~~i~~~~-~~~ 140 (254)
+.++||+|+ |.+|..+++.+...|+ +|++++++.++.+... + .+... ++ |..+ .+++.+.+.+.. ...
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD--AAQVEALADAALERFG 82 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 578999986 9999999998888999 8999988766554432 2 23321 12 3332 123333332221 123
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
++|++|++.|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 78999999875
No 293
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=96.58 E-value=0.048 Score=42.21 Aligned_cols=36 Identities=33% Similarity=0.475 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
++.+|+|.|.|.+|+.+++++...|.+.|.+.+.+.
T Consensus 22 ~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 22 EGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 688999999999999999999999994444455554
No 294
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.57 E-value=0.012 Score=45.12 Aligned_cols=91 Identities=14% Similarity=0.060 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcc-cHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPW-KKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 147 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d 147 (254)
.+.+|||+|+|.+|...++.+...|+ +|+++.+... ....+...+.- .+..+. +.. ..-.++|+||-
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i-~~~~~~-----~~~-----~~l~~adlVia 76 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKI-RWKQKE-----FEP-----SDIVDAFLVIA 76 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCE-EEEecC-----CCh-----hhcCCceEEEE
Confidence 57899999999999999988888998 8888865421 11111112211 121111 110 01137899999
Q ss_pred cCCChhHHHHHHHHcccCCcEEEEEc
Q 025336 148 CTGVPSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 148 ~~g~~~~~~~~~~~l~~~~G~~v~~g 173 (254)
+++.+ .++..+...+.. +.++...
T Consensus 77 aT~d~-elN~~i~~~a~~-~~lvn~~ 100 (202)
T PRK06718 77 ATNDP-RVNEQVKEDLPE-NALFNVI 100 (202)
T ss_pred cCCCH-HHHHHHHHHHHh-CCcEEEC
Confidence 99987 455555544444 5555443
No 295
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=96.57 E-value=0.078 Score=42.44 Aligned_cols=102 Identities=14% Similarity=0.153 Sum_probs=63.5
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhhC
Q 025336 64 EAEVEKGSSVAVLGLGTVGLGAVDGARMQG-AAKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 64 ~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
...+++|++||=.|+|+ |..++.++..++ ...|++++.++++.+.+++ .|...+.... .+... +.. ..
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~----~D~~~-~~~-~~ 138 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTN----FDGRV-FGA-AV 138 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEec----CCHHH-hhh-hc
Confidence 44678899998888765 555666666553 2379999999999887754 5654322111 12111 111 12
Q ss_pred CCCccEEE-E--cCCC-------------------------hhHHHHHHHHcccCCcEEEEEcc
Q 025336 139 GMGVDYCF-E--CTGV-------------------------PSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 139 ~~~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
+ .||.|+ | |.|. ...+..+++.++++ |+++....
T Consensus 139 ~-~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstc 200 (264)
T TIGR00446 139 P-KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTC 200 (264)
T ss_pred c-CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence 2 599998 4 4543 12567788899999 99875543
No 296
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.56 E-value=0.0073 Score=43.81 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=59.1
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCC--C-CchHHHHHHHhhCCCCccEEEEcC
Q 025336 73 VAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDE--P-NKSISELVKGITHGMGVDYCFECT 149 (254)
Q Consensus 73 vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~--~-~~~~~~~i~~~~~~~~~d~v~d~~ 149 (254)
|+|+|+|++|.+....++..|. +|..+.+++ +.+..++.|........+. . ....... . .....+|++|-|+
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~D~viv~v 75 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--S-ADAGPYDLVIVAV 75 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--G-HHHSTESEEEE-S
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--h-hccCCCcEEEEEe
Confidence 6899999999998888877999 899998887 7777776553211111000 0 0000000 0 1123899999999
Q ss_pred CChh---HHHHHHHHcccCCcEEEEEccCCC
Q 025336 150 GVPS---LLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 150 g~~~---~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
-... .++.+...+.++ ..++.+.+.-+
T Consensus 76 Ka~~~~~~l~~l~~~~~~~-t~iv~~qNG~g 105 (151)
T PF02558_consen 76 KAYQLEQALQSLKPYLDPN-TTIVSLQNGMG 105 (151)
T ss_dssp SGGGHHHHHHHHCTGEETT-EEEEEESSSSS
T ss_pred cccchHHHHHHHhhccCCC-cEEEEEeCCCC
Confidence 7642 333444455555 67777765443
No 297
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.56 E-value=0.07 Score=40.51 Aligned_cols=75 Identities=23% Similarity=0.350 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-c----CCce-EeCCCCCCCchHHHHHHHhhCCCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-F----GMTD-FINPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~----g~~~-v~~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
++.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+.+.+ + +... ..+..+ .++..+.+ .+
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~------~~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI------KG 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH------hc
Confidence 5789999986 9999998888888898 89999888776655432 2 2221 122221 02222222 27
Q ss_pred ccEEEEcCCCh
Q 025336 142 VDYCFECTGVP 152 (254)
Q Consensus 142 ~d~v~d~~g~~ 152 (254)
.|++|.++...
T Consensus 98 ~diVi~at~~g 108 (194)
T cd01078 98 ADVVFAAGAAG 108 (194)
T ss_pred CCEEEECCCCC
Confidence 89999988765
No 298
>PRK08223 hypothetical protein; Validated
Probab=96.55 E-value=0.019 Score=46.18 Aligned_cols=36 Identities=31% Similarity=0.254 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
+..+|+|.|+|++|..+++.+...|.+++..+|.+.
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 457899999999999999999999999998887764
No 299
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.55 E-value=0.023 Score=45.60 Aligned_cols=92 Identities=18% Similarity=0.143 Sum_probs=57.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-Hhc---CCceEeCCCCCCCchHHHHHHHhhCCCCcc
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAF---GMTDFINPDDEPNKSISELVKGITHGMGVD 143 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~---g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d 143 (254)
.++.+++|+|+|++|.+++..+...|+ +|+++.+++++.+.+ +.+ +....+... +... ..+|
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~------------~~~~-~~~D 180 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD------------ELPL-HRVD 180 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh------------hhcc-cCcc
Confidence 457889999999999999988888898 899998887766544 333 221222111 1111 2689
Q ss_pred EEEEcCCChh--HH---HHHHHHcccCCcEEEEEcc
Q 025336 144 YCFECTGVPS--LL---SEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 144 ~v~d~~g~~~--~~---~~~~~~l~~~~G~~v~~g~ 174 (254)
++++|++... .. ......++++ ..++++.-
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y 215 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY 215 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence 9999997531 11 1123456666 66666643
No 300
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=96.54 E-value=0.021 Score=41.43 Aligned_cols=75 Identities=21% Similarity=0.276 Sum_probs=50.4
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCC---CCchHHHHHHHhhCCCCccEEE
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDE---PNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
.+|+|+|+ |.+|.++++..|..++ -|..++-++.... ....+++.++. -.+...+++.+.-.+.++|.||
T Consensus 4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~A-----d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~ 77 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQA-----DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF 77 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeecccccc-----cceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence 57999987 9999999999999999 8888877765432 12334443320 0122333444444667999999
Q ss_pred EcCCC
Q 025336 147 ECTGV 151 (254)
Q Consensus 147 d~~g~ 151 (254)
...|+
T Consensus 78 CVAGG 82 (236)
T KOG4022|consen 78 CVAGG 82 (236)
T ss_pred Eeecc
Confidence 87765
No 301
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.048 Score=43.76 Aligned_cols=79 Identities=11% Similarity=0.113 Sum_probs=50.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCc-eE--eCCCCCCCchHHHHHHHhhC-CCCcc
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMT-DF--INPDDEPNKSISELVKGITH-GMGVD 143 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~~~~d 143 (254)
+.++||+|+ |.+|..+++.+...|. +|+.+++++++.+.+.+ ++.. .+ .|..+ ..++...+.+... -.++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD--RAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 457999986 9999999988888898 89999888777665443 2221 12 23332 1233333332211 12789
Q ss_pred EEEEcCCC
Q 025336 144 YCFECTGV 151 (254)
Q Consensus 144 ~v~d~~g~ 151 (254)
.++.+.|.
T Consensus 80 ~vi~~ag~ 87 (275)
T PRK08263 80 IVVNNAGY 87 (275)
T ss_pred EEEECCCC
Confidence 99999874
No 302
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.53 E-value=0.017 Score=52.54 Aligned_cols=76 Identities=25% Similarity=0.333 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcc---------------------cHHHHHhcCCceEeCCCCCCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPW---------------------KKEKGEAFGMTDFINPDDEPNK 127 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~---------------------~~~~~~~~g~~~v~~~~~~~~~ 127 (254)
.+.+|+|+|+|+.|+.++..++..|. +|+++++.+. +.+.++++|.+...+..-...-
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI 404 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence 57899999999999999999999999 8999877543 3445566776543332210001
Q ss_pred hHHHHHHHhhCCCCccEEEEcCCC
Q 025336 128 SISELVKGITHGMGVDYCFECTGV 151 (254)
Q Consensus 128 ~~~~~i~~~~~~~~~d~v~d~~g~ 151 (254)
.. +.+ . ..||.+|.++|.
T Consensus 405 ~~-~~~---~--~~~DavilAtGa 422 (654)
T PRK12769 405 SL-ESL---L--EDYDAVFVGVGT 422 (654)
T ss_pred CH-HHH---H--hcCCEEEEeCCC
Confidence 11 111 1 279999998885
No 303
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.53 E-value=0.031 Score=43.32 Aligned_cols=96 Identities=22% Similarity=0.231 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCce--EeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTD--FINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
+|.+||=.|+|+ |++...+| +.|+ +|+++|.+++-.+.++...... -++|+. ...+.+.+ .+..||+|+
T Consensus 59 ~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~--~~~~FDvV~ 129 (243)
T COG2227 59 PGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLAS--AGGQFDVVT 129 (243)
T ss_pred CCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHh--cCCCccEEE
Confidence 788899999754 55444444 5678 9999999999999887543221 256664 33333332 224899997
Q ss_pred E-----cCCChh-HHHHHHHHcccCCcEEEEEcc
Q 025336 147 E-----CTGVPS-LLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 147 d-----~~g~~~-~~~~~~~~l~~~~G~~v~~g~ 174 (254)
. -+..+. .+..+.+.++|+ |.++....
T Consensus 130 cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~STi 162 (243)
T COG2227 130 CMEVLEHVPDPESFLRACAKLVKPG-GILFLSTI 162 (243)
T ss_pred EhhHHHccCCHHHHHHHHHHHcCCC-cEEEEecc
Confidence 4 334433 567889999999 98776543
No 304
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.53 E-value=0.056 Score=42.71 Aligned_cols=80 Identities=23% Similarity=0.226 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCc-e--EeCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMT-D--FINPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~-~--v~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.++||+|+ |.+|..+++.+...|. +|+++++++++.+.+. ..+.. . ..|..+ ..++.+.+.++.. .
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD--EEAINAGIDYAVETF 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 3578999986 9999999998888899 8999988877655432 22322 1 223333 2333333332221 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|++|.+.+.
T Consensus 80 ~~~d~vi~~a~~ 91 (258)
T PRK12429 80 GGVDILVNNAGI 91 (258)
T ss_pred CCCCEEEECCCC
Confidence 279999998873
No 305
>PRK08264 short chain dehydrogenase; Validated
Probab=96.53 E-value=0.023 Score=44.48 Aligned_cols=75 Identities=21% Similarity=0.267 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc-eE--eCCCCCCCchHHHHHHHhhCCCCccE
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT-DF--INPDDEPNKSISELVKGITHGMGVDY 144 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~~~i~~~~~~~~~d~ 144 (254)
.+.+++|+|+ |.+|..+++.+...|+.+|++++++.++.+. .+.. .+ .|..+ .+-...+.+. -..+|+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~---~~~~~~~~~~--~~~id~ 76 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD---PASVAAAAEA--ASDVTI 76 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC---HHHHHHHHHh--cCCCCE
Confidence 4578999986 9999999999998998678888888765543 3222 12 23333 2222222222 126899
Q ss_pred EEEcCCC
Q 025336 145 CFECTGV 151 (254)
Q Consensus 145 v~d~~g~ 151 (254)
+|.+.|.
T Consensus 77 vi~~ag~ 83 (238)
T PRK08264 77 LVNNAGI 83 (238)
T ss_pred EEECCCc
Confidence 9998876
No 306
>PRK08328 hypothetical protein; Provisional
Probab=96.52 E-value=0.044 Score=42.93 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
.+.+|+|.|+|++|..+++.+...|.++++.+|.+.
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 357899999999999999999999998999987654
No 307
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.52 E-value=0.017 Score=45.90 Aligned_cols=80 Identities=15% Similarity=0.162 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCceE---eCCCCCCCchHHHHHHHhh-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTDF---INPDDEPNKSISELVKGIT-HG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---~~~~~~~~~~~~~~i~~~~-~~ 139 (254)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++.+.... .|..+ ...+.+.+.+.. ..
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN--EDAVNAGIDKVAERF 82 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 9999999999999999 899998887655433 23343321 23333 122222222221 11
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++.+.|.
T Consensus 83 ~~~d~vi~~ag~ 94 (262)
T PRK13394 83 GSVDILVSNAGI 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 268999998874
No 308
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.52 E-value=0.023 Score=45.18 Aligned_cols=77 Identities=21% Similarity=0.212 Sum_probs=49.4
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCceE--eCCCCCCCchHHHHHHHhhC-CCCcc
Q 025336 72 SVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMTDF--INPDDEPNKSISELVKGITH-GMGVD 143 (254)
Q Consensus 72 ~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~~~~~i~~~~~-~~~~d 143 (254)
++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. +.+.... .|..+ .++..+.+.+... ..++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD--KDDLKNLVKEAWELLGGID 78 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC--HHHHHHHHHHHHHhcCCCC
Confidence 5899986 8999999998888999 8999988876654432 2232222 23332 2333333333221 13799
Q ss_pred EEEEcCCC
Q 025336 144 YCFECTGV 151 (254)
Q Consensus 144 ~v~d~~g~ 151 (254)
+++++.|.
T Consensus 79 ~li~naG~ 86 (259)
T PRK08340 79 ALVWNAGN 86 (259)
T ss_pred EEEECCCC
Confidence 99998874
No 309
>PLN03139 formate dehydrogenase; Provisional
Probab=96.52 E-value=0.049 Score=45.92 Aligned_cols=45 Identities=18% Similarity=0.276 Sum_probs=36.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcC
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFG 114 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g 114 (254)
.|.+|.|+|.|.+|+..++.++..|+ +|++.+++....+..++.|
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g 242 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG 242 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence 57799999999999999999999999 8999987754444444444
No 310
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.022 Score=44.61 Aligned_cols=81 Identities=20% Similarity=0.231 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCC-c---eEeCCCCCCCchHH---HHHHHh
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGM-T---DFINPDDEPNKSIS---ELVKGI 136 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~-~---~v~~~~~~~~~~~~---~~i~~~ 136 (254)
++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+. +.+. . .-.|..+....++. +.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4578999986 9999999999888999 8999999887665432 2221 1 11222210012222 233332
Q ss_pred hCCCCccEEEEcCCC
Q 025336 137 THGMGVDYCFECTGV 151 (254)
Q Consensus 137 ~~~~~~d~v~d~~g~ 151 (254)
..+ .+|.++.+.|.
T Consensus 84 ~~~-~id~vi~~ag~ 97 (239)
T PRK08703 84 TQG-KLDGIVHCAGY 97 (239)
T ss_pred hCC-CCCEEEEeccc
Confidence 223 78999998884
No 311
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=96.48 E-value=0.043 Score=43.64 Aligned_cols=96 Identities=20% Similarity=0.158 Sum_probs=66.7
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCC
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQ-GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~-g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
......++++||-+|+|. |..+..+++.. +. +|++++.+++..+.+++.+.+.+. .+.. ++.....
T Consensus 23 ~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-------~d~~----~~~~~~~ 89 (255)
T PRK14103 23 ARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-------GDVR----DWKPKPD 89 (255)
T ss_pred HhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-------cChh----hCCCCCC
Confidence 556667889999998765 77777787765 55 899999999888888776543222 2221 1222237
Q ss_pred ccEEEEcCC-----C-hhHHHHHHHHcccCCcEEEEE
Q 025336 142 VDYCFECTG-----V-PSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 142 ~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 172 (254)
||+|+-... . ...+..+.+.|+|+ |+++..
T Consensus 90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 999986432 2 33577888899999 998765
No 312
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.026 Score=44.76 Aligned_cols=81 Identities=21% Similarity=0.200 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHH----HHHhcCCce---EeCCCCCCCchHHHHHHHhh-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKE----KGEAFGMTD---FINPDDEPNKSISELVKGIT-HG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~----~~~~~g~~~---v~~~~~~~~~~~~~~i~~~~-~~ 139 (254)
++.+++|.|+ |++|..+++.+...|+.+|+++++++++.. .++..+... ..|..+ .+.+.+.+.+.. .-
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEAF 82 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 899999999999999933999888765544 223344322 224443 122333332221 11
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|.++++.|.
T Consensus 83 g~id~li~~ag~ 94 (260)
T PRK06198 83 GRLDALVNAAGL 94 (260)
T ss_pred CCCCEEEECCCc
Confidence 279999999874
No 313
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.023 Score=45.32 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce---EeCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD---FINPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~---v~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.. .+.+... .+|..+ ..++...+++... .
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADEF 84 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 5789999987 9999999999889999 899998887655433 2223221 124433 2333343443321 2
Q ss_pred CCccEEEEcCC
Q 025336 140 MGVDYCFECTG 150 (254)
Q Consensus 140 ~~~d~v~d~~g 150 (254)
.++|++|.+.|
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 37899998876
No 314
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.47 E-value=0.032 Score=43.59 Aligned_cols=79 Identities=13% Similarity=0.128 Sum_probs=50.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccH-HHHHhcCCce-EeCCCCCCCchHHHHHHHhhCC-CCccEE
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKK-EKGEAFGMTD-FINPDDEPNKSISELVKGITHG-MGVDYC 145 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~-~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~~-~~~d~v 145 (254)
+.++||+|+ |++|...++.+...|+ +|+.+++++++. +.++..+... ..|..+ .++....+.+.... .++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence 357999986 8999999998888999 899988876532 3344455322 123332 23333444433221 269999
Q ss_pred EEcCCC
Q 025336 146 FECTGV 151 (254)
Q Consensus 146 ~d~~g~ 151 (254)
+++.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998874
No 315
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=96.47 E-value=0.025 Score=42.53 Aligned_cols=95 Identities=20% Similarity=0.229 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhhCCCCccE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGITHGMGVDY 144 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~ 144 (254)
++++||-+|+|. |..++.+++.....+|++++.+++..+.+++ .+.+.+ .... .+..+ +.....||+
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~---~d~~~----~~~~~~fD~ 112 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVN---GRAED----FQHEEQFDV 112 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEe---cchhh----ccccCCccE
Confidence 378899888754 5666666665543489999999887766543 443321 1111 22222 122348999
Q ss_pred EEEcC-CC-hhHHHHHHHHcccCCcEEEEEc
Q 025336 145 CFECT-GV-PSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 145 v~d~~-g~-~~~~~~~~~~l~~~~G~~v~~g 173 (254)
|+-.. .. +..++.+.+.++++ |+++..-
T Consensus 113 I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~~ 142 (181)
T TIGR00138 113 ITSRALASLNVLLELTLNLLKVG-GYFLAYK 142 (181)
T ss_pred EEehhhhCHHHHHHHHHHhcCCC-CEEEEEc
Confidence 98532 22 33566778889999 9988763
No 316
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.022 Score=45.08 Aligned_cols=80 Identities=20% Similarity=0.166 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCce-E--eCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMTD-F--INPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +.+... . .|..+ .++....+.++.. .
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF 81 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 3678999986 8999999998889999 8999988877665442 233222 2 23333 2223333333221 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++++.|.
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 279999998874
No 317
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.021 Score=45.36 Aligned_cols=79 Identities=13% Similarity=0.074 Sum_probs=50.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCC--c-eE--eCCCCCCCchHHHHHHHhhC-CCC
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGM--T-DF--INPDDEPNKSISELVKGITH-GMG 141 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~--~-~v--~~~~~~~~~~~~~~i~~~~~-~~~ 141 (254)
+.++||+|+ |++|..+++.+...|+ +|++++++.++.+.+.+ +.. . .. .|..+ .+++.+.+.++.. ...
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence 357999986 9999999988888899 89999888776654432 211 1 11 23332 2333333333221 126
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|+++++.|.
T Consensus 79 id~lv~~ag~ 88 (257)
T PRK07024 79 PDVVIANAGI 88 (257)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 318
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.028 Score=44.06 Aligned_cols=80 Identities=13% Similarity=0.076 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCce-E--eCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTD-F--INPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
...++||+|+ |.+|..+++.+...|. +|+++++++++.+.+.+ .+... + .|..+ .+++...+.+... .
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQF 81 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4568999986 9999999999999999 89999998766554422 22221 2 23332 2333333333221 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|.++.+.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 269999999874
No 319
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.46 E-value=0.017 Score=45.73 Aligned_cols=79 Identities=18% Similarity=0.217 Sum_probs=49.1
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc--eE--eCCCCCCCchHHHHHHHhhC-CC
Q 025336 69 KGSSVAVLGL---GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT--DF--INPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 69 ~~~~vlI~G~---g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~--~v--~~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
.+++++|+|+ +++|.+.++.+...|+ +|+.+.++++..+.++++... .. .|..+ .++..+.+.+... ..
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS--DESIERAFATIKERVG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC--HHHHHHHHHHHHHHhC
Confidence 4678999986 3899999988888999 899887774333334443211 11 23332 2333333333321 12
Q ss_pred CccEEEEcCC
Q 025336 141 GVDYCFECTG 150 (254)
Q Consensus 141 ~~d~v~d~~g 150 (254)
.+|+++++.|
T Consensus 83 ~iD~lv~nAg 92 (252)
T PRK06079 83 KIDGIVHAIA 92 (252)
T ss_pred CCCEEEEccc
Confidence 7999999887
No 320
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.46 E-value=0.024 Score=45.04 Aligned_cols=80 Identities=20% Similarity=0.261 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCc-eE--eCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMT-DF--INPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. ..+.. .. .|..+ .+.+.+.+.++.. .
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF 87 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4678999986 9999999999888999 8999988877655443 22322 12 23333 2233332333221 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|.++.+.|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 278999998874
No 321
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=96.45 E-value=0.013 Score=44.62 Aligned_cols=97 Identities=16% Similarity=0.285 Sum_probs=58.7
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhc----CCceEeCCCCCCCchHHHHHHHhhC
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAF----GMTDFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
......++.+||-+|+|. |..+..+++ .|. +|+++|.+++-.+.+++. +.. +.... .+... . .. .
T Consensus 24 ~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~-~-~~-~ 92 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA-A-AL-N 92 (195)
T ss_pred HHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh-c-cc-c
Confidence 444455567899998764 667777776 477 899999998877766542 222 11111 11110 0 11 2
Q ss_pred CCCccEEEEcCC-----C---hhHHHHHHHHcccCCcEEEEE
Q 025336 139 GMGVDYCFECTG-----V---PSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 139 ~~~~d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~ 172 (254)
..||+|+.+.- . +..+..+.+.|+++ |.++.+
T Consensus 93 -~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~ 132 (195)
T TIGR00477 93 -EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIV 132 (195)
T ss_pred -CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEE
Confidence 27999986421 1 23567888889999 985554
No 322
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.021 Score=44.48 Aligned_cols=74 Identities=20% Similarity=0.209 Sum_probs=49.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc-eEeCCCCCCCchHHHHHHHhhCCCCccEEEE
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT-DFINPDDEPNKSISELVKGITHGMGVDYCFE 147 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d 147 (254)
+.++||.|+ |.+|...++.+...|. +|++++++.++. .... ...|..+ .+...+.+.++....++|.++.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLAD--IEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEEE
Confidence 568999987 9999999999999999 899998876541 1211 1223333 2334444444433337899999
Q ss_pred cCCC
Q 025336 148 CTGV 151 (254)
Q Consensus 148 ~~g~ 151 (254)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
No 323
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.44 E-value=0.02 Score=45.84 Aligned_cols=78 Identities=24% Similarity=0.229 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHH----HHhcC-C-ceEeCCCCCCCchHH---HHHHHhhC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEK----GEAFG-M-TDFINPDDEPNKSIS---ELVKGITH 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~----~~~~g-~-~~v~~~~~~~~~~~~---~~i~~~~~ 138 (254)
+|+.|||+|+ +++|++.++=...+|+ +++..|.+++..+. .++.| + ..+.|-.+ .++.. +++++..
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e~- 112 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKEV- 112 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHhc-
Confidence 6899999987 7999988877777888 88888887754443 34445 2 23344443 23433 3444432
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
| .+|++++.+|-
T Consensus 113 G-~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 G-DVDILVNNAGI 124 (300)
T ss_pred C-CceEEEecccc
Confidence 2 89999999985
No 324
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.056 Score=43.88 Aligned_cols=80 Identities=15% Similarity=0.092 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccc-HHH----HHhcCCce-E--eCCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWK-KEK----GEAFGMTD-F--INPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~-~~~----~~~~g~~~-v--~~~~~~~~~~~~~~i~~~~~- 138 (254)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++ .+. ++..+... + .|..+ ...+...+.+...
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~i~~~ 121 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD--EAFCKDAVEETVRE 121 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 4678999987 8999999988888899 88888776532 222 22234322 1 23332 1222232332211
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
..++|++|.+.|.
T Consensus 122 ~~~iD~lI~~Ag~ 134 (290)
T PRK06701 122 LGRLDILVNNAAF 134 (290)
T ss_pred cCCCCEEEECCcc
Confidence 1278999998874
No 325
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.43 E-value=0.016 Score=44.68 Aligned_cols=101 Identities=17% Similarity=0.215 Sum_probs=62.8
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhhC
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
...+++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++ .+...+ +... .+... .+..
T Consensus 72 ~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~---~d~~~---~~~~ 141 (212)
T PRK00312 72 ELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNV-SVRH---GDGWK---GWPA 141 (212)
T ss_pred HhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCce-EEEE---CCccc---CCCc
Confidence 567788999999998764 55555556553 4 79999999877766654 343221 1111 11111 1112
Q ss_pred CCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEcc
Q 025336 139 GMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 139 ~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
...||+|+-..........+.+.|+++ |+++..-.
T Consensus 142 ~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~~ 176 (212)
T PRK00312 142 YAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPVG 176 (212)
T ss_pred CCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEEc
Confidence 237999986555444567788899999 98876433
No 326
>PRK05717 oxidoreductase; Validated
Probab=96.43 E-value=0.025 Score=44.83 Aligned_cols=80 Identities=18% Similarity=0.173 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcCCce---EeCCCCCCCchHHHHHHHhhC-CCCc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFGMTD---FINPDDEPNKSISELVKGITH-GMGV 142 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g~~~---v~~~~~~~~~~~~~~i~~~~~-~~~~ 142 (254)
++.+++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +.++... ..|..+ ..+....+.++.. ..++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999986 9999999998888999 899988876655443 3344221 223333 1223233333321 1269
Q ss_pred cEEEEcCCC
Q 025336 143 DYCFECTGV 151 (254)
Q Consensus 143 d~v~d~~g~ 151 (254)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998874
No 327
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.033 Score=44.08 Aligned_cols=80 Identities=16% Similarity=0.142 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccc-HHH----HHhcCCce-E--eCCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWK-KEK----GEAFGMTD-F--INPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~-~~~----~~~~g~~~-v--~~~~~~~~~~~~~~i~~~~~- 138 (254)
++.++||+|+ +++|..+++.+...|+ +|++++++.++ .+. ++..+... . .|..+ .++....+.+...
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 83 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS--KADLRAAVARTEAE 83 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4678999986 8999999999999999 89888876532 222 22334221 2 23332 2333333333221
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
..++|+++++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (254)
T PRK06114 84 LGALTLAVNAAGI 96 (254)
T ss_pred cCCCCEEEECCCC
Confidence 2379999999874
No 328
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.42 E-value=0.037 Score=46.30 Aligned_cols=36 Identities=31% Similarity=0.321 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
.+.+|||+|+|++|..+++.+...|.+++..+|.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 457899999999999999999999999999998765
No 329
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.42 E-value=0.019 Score=43.82 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKN 103 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~ 103 (254)
+..+|+|.|+|++|...++.+...|.++++.+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34679999999999999999999999889999887
No 330
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.42 E-value=0.012 Score=43.28 Aligned_cols=78 Identities=21% Similarity=0.261 Sum_probs=49.1
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC--cccHHHH----HhcCCce-Ee--CCCCCCCchHHHHHHHhh-CCC
Q 025336 72 SVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKN--PWKKEKG----EAFGMTD-FI--NPDDEPNKSISELVKGIT-HGM 140 (254)
Q Consensus 72 ~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~--~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~-~~~ 140 (254)
++||+|+ +++|...++.+...|..+|+.+.++ .++.+.+ +..+... ++ |..+ .++....+.+.. ...
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD--PESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS--HHHHHHHHHHHHHHHS
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc--cccccccccccccccc
Confidence 6899986 9999998888877777588888887 3434333 3344322 22 2222 234444444433 233
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
.+|++|.+.|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 89999999886
No 331
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.025 Score=43.91 Aligned_cols=74 Identities=18% Similarity=0.173 Sum_probs=49.3
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcCCceE-eCCCCCCCchHHHHHHHhhCCCCccEEEEc
Q 025336 72 SVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFEC 148 (254)
Q Consensus 72 ~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~ 148 (254)
+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.+...+ .|..+ .+++.+.+.++. + .+|+++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~-~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLFP-H-HLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHHh-h-cCcEEEEC
Confidence 4899986 8999999999888999 899998887776654 33443322 34443 123333333332 2 68999988
Q ss_pred CC
Q 025336 149 TG 150 (254)
Q Consensus 149 ~g 150 (254)
.|
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 65
No 332
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.41 E-value=0.11 Score=35.72 Aligned_cols=92 Identities=16% Similarity=0.167 Sum_probs=60.0
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCCh
Q 025336 73 VAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP 152 (254)
Q Consensus 73 vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~ 152 (254)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|...+. .+ ..-.+.+++. +-..++.++-+.+..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i~-gd----~~~~~~l~~a-~i~~a~~vv~~~~~d 73 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVIY-GD----ATDPEVLERA-GIEKADAVVILTDDD 73 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEEE-S-----TTSHHHHHHT-TGGCESEEEEESSSH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccccc-cc----chhhhHHhhc-CccccCEEEEccCCH
Confidence 5788999999999999999776 899999999999999988855333 22 1122233333 223788888888765
Q ss_pred hHH---HHHHHHcccCCcEEEEE
Q 025336 153 SLL---SEALETTKVGKGKVIVI 172 (254)
Q Consensus 153 ~~~---~~~~~~l~~~~G~~v~~ 172 (254)
..- -..++.+.+. .+++..
T Consensus 74 ~~n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 74 EENLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHHHCCC-CeEEEE
Confidence 321 1233344555 565544
No 333
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.41 E-value=0.026 Score=45.02 Aligned_cols=80 Identities=15% Similarity=0.231 Sum_probs=48.6
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCceEe--CCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGL---GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTDFI--NPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~---g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v~--~~~~~~~~~~~~~i~~~~~- 138 (254)
++.++||+|+ +++|.+.++.+...|+ +|+.+.+.++..+.+++ .+....+ |-.+ .++....+.+...
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 81 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS--DDEINQVFADLGKH 81 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC--HHHHHHHHHHHHHH
Confidence 4678999983 5899999998889999 88887655332233322 2322222 3332 2334434433322
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
..++|+++++.|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (261)
T PRK08690 82 WDGLDGLVHSIGF 94 (261)
T ss_pred hCCCcEEEECCcc
Confidence 1379999998864
No 334
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.026 Score=44.47 Aligned_cols=80 Identities=18% Similarity=0.197 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-c--CCc-eEe--CCCCCCCchHHHHHHHhh-CCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-F--GMT-DFI--NPDDEPNKSISELVKGIT-HGM 140 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~--g~~-~v~--~~~~~~~~~~~~~i~~~~-~~~ 140 (254)
++.+++|+|+ |.+|..+++.+...|+ +|+.+.++.++.+...+ . +.. .++ |..+ .....+.+.++. ...
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS--AEAVEALVDFVAARWG 80 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 3678999987 9999999988888899 89999888765543322 2 221 122 3332 233333333321 113
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
++|+++.+.|.
T Consensus 81 ~id~vi~~ag~ 91 (252)
T PRK06138 81 RLDVLVNNAGF 91 (252)
T ss_pred CCCEEEECCCC
Confidence 79999998884
No 335
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.026 Score=45.31 Aligned_cols=79 Identities=19% Similarity=0.300 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-h---cC--Cc-eEe--CCCCCCCchHHHHHHHhhC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-A---FG--MT-DFI--NPDDEPNKSISELVKGITH 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~---~g--~~-~v~--~~~~~~~~~~~~~i~~~~~ 138 (254)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+... + .+ .. .++ |..+ .+++...+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD--EDQVARAVDAATA 82 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 3678999987 9999999999999999 8999988876544332 1 11 11 122 3332 2333333333221
Q ss_pred -CCCccEEEEcCC
Q 025336 139 -GMGVDYCFECTG 150 (254)
Q Consensus 139 -~~~~d~v~d~~g 150 (254)
..++|++|.+.|
T Consensus 83 ~~~~~d~li~~ag 95 (276)
T PRK05875 83 WHGRLHGVVHCAG 95 (276)
T ss_pred HcCCCCEEEECCC
Confidence 237899999887
No 336
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.022 Score=45.22 Aligned_cols=80 Identities=19% Similarity=0.167 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh---cCCc-eE--eCCCCCCCchHHHHHHHhhC-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA---FGMT-DF--INPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+..++ .+.. .+ .|..+ .+++...+.++.. ..
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAKFG 82 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhcC
Confidence 4678999987 8999999988888999 78888888766543332 3422 12 23332 2333333333322 12
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
++|.+|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (258)
T PRK08628 83 RIDGLVNNAGV 93 (258)
T ss_pred CCCEEEECCcc
Confidence 79999999983
No 337
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.39 E-value=0.018 Score=48.42 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
.+.+|+|+|+|++|..+++.+...|.++++.+|.+.
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D~ 75 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDDT 75 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence 456899999999999999999999998999998763
No 338
>PRK04266 fibrillarin; Provisional
Probab=96.39 E-value=0.072 Score=41.55 Aligned_cols=102 Identities=19% Similarity=0.191 Sum_probs=61.9
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC--c--eEeCCCCCCCchHHHHHHHhhC
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM--T--DFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~--~--~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
+...++++++||=.|+|+ |..+..+++..+..+|++++.+++.++.+.+... . ..+..+. .+. .....+ .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~-~~~~~l-~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKP-ERYAHV-V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCc-chhhhc-c
Confidence 357888999999888754 5566667776653489999999987765433211 1 1221111 110 000111 1
Q ss_pred CCCccEEEEcCCChh----HHHHHHHHcccCCcEEEEE
Q 025336 139 GMGVDYCFECTGVPS----LLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 139 ~~~~d~v~d~~g~~~----~~~~~~~~l~~~~G~~v~~ 172 (254)
. .||+++-....+. .+..+.+.|+|+ |++++.
T Consensus 140 ~-~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 140 E-KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred c-cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 2 6999995443321 367888899999 998874
No 339
>PRK08317 hypothetical protein; Provisional
Probab=96.38 E-value=0.019 Score=44.88 Aligned_cols=102 Identities=23% Similarity=0.342 Sum_probs=68.2
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCCcccHHHHHhc----CCc-eEeCCCCCCCchHHHHHHH
Q 025336 62 WKEAEVEKGSSVAVLGLGTVGLGAVDGARMQG-AAKIIGIDKNPWKKEKGEAF----GMT-DFINPDDEPNKSISELVKG 135 (254)
Q Consensus 62 ~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g-~~~v~~v~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~i~~ 135 (254)
.....+.++++||.+|+|. |..+..+++..+ ..++++++.+++..+.+++. +.. .++..+. .+. .
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----~ 82 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL-----P 82 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----C
Confidence 3567788999999999875 888889988774 23899999999888887664 111 1111110 110 1
Q ss_pred hhCCCCccEEEEcC-----C-ChhHHHHHHHHcccCCcEEEEEcc
Q 025336 136 ITHGMGVDYCFECT-----G-VPSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 136 ~~~~~~~d~v~d~~-----g-~~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
+.. ..||+|+-.. . ....+..+.+.++++ |.++....
T Consensus 83 ~~~-~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 125 (241)
T PRK08317 83 FPD-GSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT 125 (241)
T ss_pred CCC-CCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence 122 3799988532 1 233678889999999 99887653
No 340
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.38 E-value=0.026 Score=43.60 Aligned_cols=104 Identities=17% Similarity=0.157 Sum_probs=61.5
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcCCceEe-C------CCCCCCchHHHHHHHhh-
Q 025336 67 VEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFGMTDFI-N------PDDEPNKSISELVKGIT- 137 (254)
Q Consensus 67 ~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g~~~v~-~------~~~~~~~~~~~~i~~~~- 137 (254)
+.++.+||+.|+|. |.-++-+|. .|+ +|++++.++.-.+.+. +.+..... + ++.....-....+.++.
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35678999999875 777777775 699 9999999998777642 22221000 0 00000000000111111
Q ss_pred -CCCCccEEEEcCCC--------hhHHHHHHHHcccCCcEEEEEcc
Q 025336 138 -HGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 138 -~~~~~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
....||.++|+..- +..+..+.++|+|+ |+++..+.
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 11269999996531 23577899999999 98666544
No 341
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.38 E-value=0.025 Score=44.75 Aligned_cols=80 Identities=18% Similarity=0.305 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce-E--eCCCCCCCchHHHHHHHhh-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD-F--INPDDEPNKSISELVKGIT-HG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~i~~~~-~~ 139 (254)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +..|... . .|..+ .+++...+.+.. ..
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 4678999986 9999999998888899 899998887655433 2223221 1 23333 133333333221 12
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|.+|.+.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 342
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.038 Score=43.89 Aligned_cols=77 Identities=16% Similarity=0.239 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-----cCCc-eE--eCCCCCCCchHHHHHHHhhCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-----FGMT-DF--INPDDEPNKSISELVKGITHG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-----~g~~-~v--~~~~~~~~~~~~~~i~~~~~~ 139 (254)
++.+++|.|+ +++|...++.+...|+ +|+++++++++.+.+.+ .+.. .. .|..+ .++....+.+.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~--- 79 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS--PEAREQLAAEA--- 79 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHh---
Confidence 4678999987 8999999998888999 99999888776654322 1321 12 23332 12333333222
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
..+|.++++.|.
T Consensus 80 g~id~lv~~ag~ 91 (259)
T PRK06125 80 GDIDILVNNAGA 91 (259)
T ss_pred CCCCEEEECCCC
Confidence 279999998874
No 343
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.026 Score=44.90 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=49.8
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce-E--eCCCCCCCchHHHHHHHhhC-CCC
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD-F--INPDDEPNKSISELVKGITH-GMG 141 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~i~~~~~-~~~ 141 (254)
.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +..+... + .|..+ ...+...+.+... ..+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFGG 78 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 57899987 9999999999999999 899998887654433 2233321 1 23332 1233333333211 127
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|+++.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 344
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.016 Score=46.38 Aligned_cols=77 Identities=18% Similarity=0.276 Sum_probs=49.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCce-EeCCCCCCCchHHHHHHHhhC-CCCccEEE
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYCF 146 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~-~~~~d~v~ 146 (254)
+.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.. .+... ..|..+ .+++...+.+... ...+|+++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTD--DASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEEE
Confidence 467999987 9999999988888899 899998876554322 12221 224433 2334444433321 22799999
Q ss_pred EcCCC
Q 025336 147 ECTGV 151 (254)
Q Consensus 147 d~~g~ 151 (254)
++.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99984
No 345
>PRK06720 hypothetical protein; Provisional
Probab=96.35 E-value=0.042 Score=40.81 Aligned_cols=80 Identities=19% Similarity=0.195 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce-Ee--CCCCCCCchHHHHHHHhh-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD-FI--NPDDEPNKSISELVKGIT-HG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~-~~ 139 (254)
++.+++|.|+ +++|...+..+...|+ +|++++++.+..+.. +..+... .+ |..+ ...+.+.+.+.. ..
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK--QGDWQRVISITLNAF 91 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 7899999988888999 899998876654332 2234321 22 3222 122233222211 12
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++++.|.
T Consensus 92 G~iDilVnnAG~ 103 (169)
T PRK06720 92 SRIDMLFQNAGL 103 (169)
T ss_pred CCCCEEEECCCc
Confidence 278999988874
No 346
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.34 E-value=0.063 Score=44.05 Aligned_cols=90 Identities=14% Similarity=0.215 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 148 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~ 148 (254)
.|.+|.|+|.|.+|+..++.++..|+ +|++.+++.++.. +...+.. . .++.+.+ . ..|+++.+
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~--~---~~l~e~l----~--~aDvvv~~ 197 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAG--R---EELSAFL----S--QTRVLINL 197 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeecc--c---ccHHHHH----h--cCCEEEEC
Confidence 57899999999999999999999999 9999977654321 1111111 0 2222222 1 56777776
Q ss_pred CCChhHH-----HHHHHHcccCCcEEEEEccCC
Q 025336 149 TGVPSLL-----SEALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 149 ~g~~~~~-----~~~~~~l~~~~G~~v~~g~~~ 176 (254)
....+.. ...+..++++ ..+|-++...
T Consensus 198 lPlt~~T~~li~~~~l~~mk~g-a~lIN~aRG~ 229 (312)
T PRK15469 198 LPNTPETVGIINQQLLEQLPDG-AYLLNLARGV 229 (312)
T ss_pred CCCCHHHHHHhHHHHHhcCCCC-cEEEECCCcc
Confidence 6543221 2345567776 6766666543
No 347
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.021 Score=45.17 Aligned_cols=80 Identities=21% Similarity=0.291 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCc-eE--eCCCCCCCchHHHHHHHhh-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMT-DF--INPDDEPNKSISELVKGIT-HG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~-~v--~~~~~~~~~~~~~~i~~~~-~~ 139 (254)
++.+++|.|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.+.. .. .|..+ ..++...+.+.. ..
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR--DAEVKALVEQTIAAY 82 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 9999999988888899 899998887664433 233322 12 23332 122323222221 11
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++.+.|.
T Consensus 83 g~id~li~~ag~ 94 (253)
T PRK06172 83 GRLDYAFNNAGI 94 (253)
T ss_pred CCCCEEEECCCC
Confidence 278999998874
No 348
>PRK07411 hypothetical protein; Validated
Probab=96.34 E-value=0.019 Score=48.70 Aligned_cols=36 Identities=25% Similarity=0.245 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
...+|||.|+|++|..+++.+-..|.++++.+|.+.
T Consensus 37 ~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ 72 (390)
T PRK07411 37 KAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDV 72 (390)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 356899999999999999999999999999987764
No 349
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.047 Score=43.93 Aligned_cols=80 Identities=18% Similarity=0.207 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce---EeCCCCCCCchHHHHHHHhh-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD---FINPDDEPNKSISELVKGIT-HG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~---v~~~~~~~~~~~~~~i~~~~-~~ 139 (254)
++.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +..+... ..|..+ ..++...+.+.. ..
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence 4678999986 9999999999899999 899888887665543 2234322 123332 233333333321 11
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++++.|.
T Consensus 82 g~id~li~nAg~ 93 (275)
T PRK05876 82 GHVDVVFSNAGI 93 (275)
T ss_pred CCCCEEEECCCc
Confidence 278999998873
No 350
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.022 Score=45.16 Aligned_cols=80 Identities=20% Similarity=0.114 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCc---eEeCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMT---DFINPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+.. ...|..+ .+++...+.+... -
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 9999999999999999 89999888766554422 2322 1223332 2333333333211 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 278999998874
No 351
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.031 Score=44.03 Aligned_cols=80 Identities=21% Similarity=0.251 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCc-e--EeCCCCCCCchHHHHHHHhh-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMT-D--FINPDDEPNKSISELVKGIT-HG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~-~--v~~~~~~~~~~~~~~i~~~~-~~ 139 (254)
++.++||+|+ |.+|..+++.+...|+ +|+.++++++..+.+. ..+.. . ..|..+ .........+.. ..
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 9999999998888999 8999988876544332 12221 1 233333 122222222221 11
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (250)
T PRK07774 82 GGIDYLVNNAAI 93 (250)
T ss_pred CCCCEEEECCCC
Confidence 269999998883
No 352
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.32 E-value=0.03 Score=44.61 Aligned_cols=79 Identities=16% Similarity=0.231 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCceE--eCCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGL-G--TVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMTDF--INPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~-g--~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~~~~~i~~~~~- 138 (254)
++.+++|+|+ + ++|.+.++.+...|+ +|+..+++++..+.++ +.|.... .|-.+ .++....+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~ 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence 4678999987 4 799999988888999 8888876632122222 2343222 34443 2333333333322
Q ss_pred CCCccEEEEcCC
Q 025336 139 GMGVDYCFECTG 150 (254)
Q Consensus 139 ~~~~d~v~d~~g 150 (254)
...+|+++++.|
T Consensus 84 ~g~iDilVnnag 95 (260)
T PRK06603 84 WGSFDFLLHGMA 95 (260)
T ss_pred cCCccEEEEccc
Confidence 127999999876
No 353
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.32 E-value=0.073 Score=44.13 Aligned_cols=37 Identities=19% Similarity=0.420 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCccc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWK 106 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~ 106 (254)
.|.+|.|+|.|.+|...++.++..|+ +|++.+++.+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 99999887543
No 354
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]
Probab=96.31 E-value=0.033 Score=42.47 Aligned_cols=99 Identities=23% Similarity=0.198 Sum_probs=74.2
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCc
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGV 142 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~ 142 (254)
.+..+.+-..|.=+|.|+ |...-.+++......+.+++.|++-++.+++...+.-+... .++.+......
T Consensus 24 a~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~~a---------Dl~~w~p~~~~ 93 (257)
T COG4106 24 ARVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFEEA---------DLRTWKPEQPT 93 (257)
T ss_pred hhCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCceecc---------cHhhcCCCCcc
Confidence 445555667777778886 88899999988866999999999999999887765444332 35666666688
Q ss_pred cEEEEcC------CChhHHHHHHHHcccCCcEEEEE
Q 025336 143 DYCFECT------GVPSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 143 d~v~d~~------g~~~~~~~~~~~l~~~~G~~v~~ 172 (254)
|++|-+. ..+..+..++..++|+ |.+.+-
T Consensus 94 dllfaNAvlqWlpdH~~ll~rL~~~L~Pg-g~LAVQ 128 (257)
T COG4106 94 DLLFANAVLQWLPDHPELLPRLVSQLAPG-GVLAVQ 128 (257)
T ss_pred chhhhhhhhhhccccHHHHHHHHHhhCCC-ceEEEE
Confidence 8888443 2355788999999999 887553
No 355
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.03 Score=44.47 Aligned_cols=80 Identities=19% Similarity=0.187 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hc-----CCc-eE--eCCCCCCCchHHHHHHHhhC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AF-----GMT-DF--INPDDEPNKSISELVKGITH 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~-----g~~-~v--~~~~~~~~~~~~~~i~~~~~ 138 (254)
.+.++||.|+ |++|..+++.+...|+ +|+.+++++++.+.+. ++ +.. .+ .|..+ .+++...+.++..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE 82 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4678999986 8999999999989999 8999988876655432 21 211 11 23332 2333333333221
Q ss_pred -CCCccEEEEcCCC
Q 025336 139 -GMGVDYCFECTGV 151 (254)
Q Consensus 139 -~~~~d~v~d~~g~ 151 (254)
-.++|+++++.|.
T Consensus 83 ~~g~id~li~~ag~ 96 (260)
T PRK07063 83 AFGPLDVLVNNAGI 96 (260)
T ss_pred HhCCCcEEEECCCc
Confidence 1279999998873
No 356
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.30 E-value=0.032 Score=44.85 Aligned_cols=79 Identities=24% Similarity=0.194 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCc-eE--eCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMT-DF--INPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.+++|+|+ |++|+..++.+...|+ +|+++++++++.+.+. ..+.. .. .|..+ ..+....+.+... -
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD--KESLEQARQQILEDF 85 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4678999986 9999999999889999 8999988876554332 23322 11 23332 1233333333221 1
Q ss_pred CCccEEEEcCC
Q 025336 140 MGVDYCFECTG 150 (254)
Q Consensus 140 ~~~d~v~d~~g 150 (254)
.++|+++.+.|
T Consensus 86 g~id~li~~ag 96 (278)
T PRK08277 86 GPCDILINGAG 96 (278)
T ss_pred CCCCEEEECCC
Confidence 37999999887
No 357
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.30 E-value=0.025 Score=48.01 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
...+|||+|+|++|..++..+...|.+++..+|.+.
T Consensus 41 ~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D~ 76 (392)
T PRK07878 41 KNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFDV 76 (392)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCCE
Confidence 456899999999999999999999998999887764
No 358
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.13 Score=40.63 Aligned_cols=105 Identities=16% Similarity=0.204 Sum_probs=60.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CCcccHHHH----HhcCCce-E--eCCCCCCCchHHHHHHHhh--
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGID-KNPWKKEKG----EAFGMTD-F--INPDDEPNKSISELVKGIT-- 137 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~-~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~i~~~~-- 137 (254)
.+.++||+|+ |++|..+++.+...|+ +|++.. +++++.+.+ +..+... . .|..+ .++....+.++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES--LHGVEALYSSLDNE 79 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCC--HHHHHHHHHHHHHH
Confidence 3678999986 8999999999999999 777764 443433322 2223221 1 12222 122222222211
Q ss_pred -----CCCCccEEEEcCCChh-------------------------HHHHHHHHcccCCcEEEEEccCCC
Q 025336 138 -----HGMGVDYCFECTGVPS-------------------------LLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 138 -----~~~~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
+..++|+++++.|... .+..+++.+... |+++.+++...
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~~ 148 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAAT 148 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCccc
Confidence 1237999999887310 122345556667 89998887544
No 359
>PRK08643 acetoin reductase; Validated
Probab=96.29 E-value=0.032 Score=44.15 Aligned_cols=79 Identities=15% Similarity=0.151 Sum_probs=50.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCce-E--eCCCCCCCchHHHHHHHhhC-CC
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMTD-F--INPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--~~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. ..+... . .|..+ ++.+.+.+.+... ..
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 468899986 9999999999999999 8999988876654432 223221 1 23333 2333333333221 13
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
++|+++.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 79999998864
No 360
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.038 Score=44.31 Aligned_cols=78 Identities=14% Similarity=0.149 Sum_probs=51.1
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhc-CCc-e--EeCCCCCCCchHHHHHHHhh-CCCCccE
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAF-GMT-D--FINPDDEPNKSISELVKGIT-HGMGVDY 144 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~-g~~-~--v~~~~~~~~~~~~~~i~~~~-~~~~~d~ 144 (254)
.++||+|+ |.+|..+++.+...|. +|+++.+++++.+.++.. +.. . ..|..+ .+.+...+.+.. ...++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 47999986 9999999998888999 899998988776665442 221 1 123333 122333333321 1237899
Q ss_pred EEEcCCC
Q 025336 145 CFECTGV 151 (254)
Q Consensus 145 v~d~~g~ 151 (254)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9998874
No 361
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.036 Score=45.50 Aligned_cols=80 Identities=23% Similarity=0.275 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-h----cC-Cc-e--EeCCCCCCCchHHHHHHHhh-
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-A----FG-MT-D--FINPDDEPNKSISELVKGIT- 137 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~----~g-~~-~--v~~~~~~~~~~~~~~i~~~~- 137 (254)
.+.+++|+|+ +++|..+++.+...|+ +|+.+++++++.+.+. + .+ .. . ..|..+ .++....+.++.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~~ 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLRA 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence 4678999987 8999999988888999 8999989877655432 1 11 11 1 124433 122333333322
Q ss_pred CCCCccEEEEcCCC
Q 025336 138 HGMGVDYCFECTGV 151 (254)
Q Consensus 138 ~~~~~d~v~d~~g~ 151 (254)
...++|++|++.|.
T Consensus 90 ~~~~iD~li~nAG~ 103 (313)
T PRK05854 90 EGRPIHLLINNAGV 103 (313)
T ss_pred hCCCccEEEECCcc
Confidence 12379999998874
No 362
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.092 Score=40.57 Aligned_cols=74 Identities=12% Similarity=0.115 Sum_probs=46.0
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCceEe--CCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMTDFI--NPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~~v~--~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
.++||+|+ |.+|..++..+... + +|++++++.++.+.+.+ .....++ |..+ ...+.+.+.+. .++|.++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~---~~id~vi 76 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD--PEAIAAAVEQL---GRLDVLV 76 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC--HHHHHHHHHhc---CCCCEEE
Confidence 57999986 99999988777766 7 89999998776555442 2111222 3322 12222222221 2799999
Q ss_pred EcCCC
Q 025336 147 ECTGV 151 (254)
Q Consensus 147 d~~g~ 151 (254)
.+.|.
T Consensus 77 ~~ag~ 81 (227)
T PRK08219 77 HNAGV 81 (227)
T ss_pred ECCCc
Confidence 99874
No 363
>PLN02244 tocopherol O-methyltransferase
Probab=96.28 E-value=0.015 Score=48.35 Aligned_cols=98 Identities=18% Similarity=0.291 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhc----CCceEeCCCCCCCchHHHHHHHhhCCCCcc
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAF----GMTDFINPDDEPNKSISELVKGITHGMGVD 143 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d 143 (254)
+++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++. +...-+.... .+... + .+ ....||
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~---~D~~~-~-~~-~~~~FD 188 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQV---ADALN-Q-PF-EDGQFD 188 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE---cCccc-C-CC-CCCCcc
Confidence 6788999988764 6677788887788 999999999877766542 3211011110 11110 0 11 223799
Q ss_pred EEEEcCC-----C-hhHHHHHHHHcccCCcEEEEEcc
Q 025336 144 YCFECTG-----V-PSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 144 ~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
+|+-.-. . ...+..+.+.++++ |++++...
T Consensus 189 ~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 189 LVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred EEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 9985322 1 23577888999999 99987654
No 364
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.28 E-value=0.063 Score=40.05 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=29.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
+|+|+|+|++|...++.+...|.++++.+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999998899998875
No 365
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=96.28 E-value=0.074 Score=40.12 Aligned_cols=98 Identities=17% Similarity=0.244 Sum_probs=63.0
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCce--EeCCCCCCCchHHHHHHHh
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTD--FINPDDEPNKSISELVKGI 136 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i~~~ 136 (254)
....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++.. +... .+
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~------d~~~---~~ 94 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG------EAPI---EL 94 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec------Cchh---hc
Confidence 455677889999888764 6777777776543389999999987777754 33221 2221 1111 11
Q ss_pred hCCCCccEEEEcCC-C--hhHHHHHHHHcccCCcEEEEEc
Q 025336 137 THGMGVDYCFECTG-V--PSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 137 ~~~~~~d~v~d~~g-~--~~~~~~~~~~l~~~~G~~v~~g 173 (254)
. ..||+++.... . ...+..+.+.|+++ |+++...
T Consensus 95 -~-~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~ 131 (187)
T PRK08287 95 -P-GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF 131 (187)
T ss_pred -C-cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence 2 27999985432 1 23567788899999 9987643
No 366
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=96.28 E-value=0.065 Score=43.22 Aligned_cols=87 Identities=17% Similarity=0.341 Sum_probs=55.6
Q ss_pred EEEEEcCCHHHHHH-HHHHHHcCCCeEEEE-cCCccc--HHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEE
Q 025336 72 SVAVLGLGTVGLGA-VDGARMQGAAKIIGI-DKNPWK--KEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 147 (254)
Q Consensus 72 ~vlI~G~g~~G~~~-~~~a~~~g~~~v~~v-~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d 147 (254)
+|.|+|+|.+|... ..+.+..++ ++.++ +.++++ ++.++++|.....+ +....+ ....+|+|++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll----~~~dIDaV~i 70 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLL----ANPDIDIVFD 70 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHh----cCCCCCEEEE
Confidence 58899999999854 566655566 55554 445544 45677888654432 222222 2237999999
Q ss_pred cCCChhHHHHHHHHcccCCcEEEEE
Q 025336 148 CTGVPSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 148 ~~g~~~~~~~~~~~l~~~~G~~v~~ 172 (254)
+++.....+.+..++..+ +-++.
T Consensus 71 aTp~~~H~e~a~~al~aG--k~VId 93 (285)
T TIGR03215 71 ATSAKAHARHARLLAELG--KIVID 93 (285)
T ss_pred CCCcHHHHHHHHHHHHcC--CEEEE
Confidence 999886666776666654 44443
No 367
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.28 E-value=0.03 Score=44.39 Aligned_cols=79 Identities=20% Similarity=0.230 Sum_probs=49.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-h----cCC--ceEe--CCCCCCCchHHHHHHHhhC-
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-A----FGM--TDFI--NPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~----~g~--~~v~--~~~~~~~~~~~~~i~~~~~- 138 (254)
+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. . .+. ...+ |..+ .++....+.+...
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 78 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS--EQSVLALSRGVDEI 78 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC--HHHHHHHHHHHHHH
Confidence 467999987 8999999999888999 8999988876554332 1 221 1122 3332 1223333333221
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
..++|+++++.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (259)
T PRK12384 79 FGRVDLLVYNAGI 91 (259)
T ss_pred cCCCCEEEECCCc
Confidence 1379999998873
No 368
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.27 E-value=0.033 Score=45.91 Aligned_cols=79 Identities=23% Similarity=0.259 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcC---Cc-eE--eCCCCCCCchHHHHHHHhh-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFG---MT-DF--INPDDEPNKSISELVKGIT-HG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g---~~-~v--~~~~~~~~~~~~~~i~~~~-~~ 139 (254)
.+.+++|+|+ |++|..+++.+...|+ +|++++++.++.+.+ +++. .. .. .|..+ ..+....+.++. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 4678999986 9999999998888898 899998887765543 2221 11 11 24333 122333333322 12
Q ss_pred CCccEEEEcCC
Q 025336 140 MGVDYCFECTG 150 (254)
Q Consensus 140 ~~~d~v~d~~g 150 (254)
.++|++|++.|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 36999999887
No 369
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.27 E-value=0.058 Score=43.81 Aligned_cols=43 Identities=21% Similarity=0.190 Sum_probs=36.9
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM 115 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~ 115 (254)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 37789999999988888888898 89999999988888777664
No 370
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.27 E-value=0.046 Score=43.73 Aligned_cols=104 Identities=16% Similarity=0.186 Sum_probs=67.0
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC--ceEeCCCCCCCchHHHHHHHhhC
Q 025336 61 AWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM--TDFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 61 l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
+....+++++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++... ..+ .... .+... ... .
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i-~~~~---~D~~~--~~~-~ 114 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKI-EFEA---NDILK--KDF-P 114 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCce-EEEE---CCccc--CCC-C
Confidence 34667888999999998763 5566677777788 99999999988888776321 111 1111 11110 011 2
Q ss_pred CCCccEEEE--cC---C---ChhHHHHHHHHcccCCcEEEEEcc
Q 025336 139 GMGVDYCFE--CT---G---VPSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 139 ~~~~d~v~d--~~---g---~~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
...||+|+. +. . ....+..+.+.|+|+ |+++....
T Consensus 115 ~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 115 ENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 237999985 22 1 123577888999999 99987654
No 371
>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=96.26 E-value=0.032 Score=44.80 Aligned_cols=94 Identities=20% Similarity=0.204 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh--------cCCce---------------EeCCCCCC
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA--------FGMTD---------------FINPDDEP 125 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~--------~g~~~---------------v~~~~~~~ 125 (254)
.++.|+|.|+|++|..++-.+.+.|++++..++-+.-.+.-+.. .|-.. -++.+.
T Consensus 73 ~~syVVVVG~GgVGSwv~nmL~RSG~qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~skiaPw~eIdar~-- 150 (430)
T KOG2018|consen 73 TNSYVVVVGAGGVGSWVANMLLRSGVQKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHFSKIAPWCEIDARN-- 150 (430)
T ss_pred cCcEEEEEecCchhHHHHHHHHHhcCceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHHHhhCccceecHHH--
Confidence 46788999999999999999999999888888765544333321 22100 011110
Q ss_pred CchHH-HHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCc
Q 025336 126 NKSIS-ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG 167 (254)
Q Consensus 126 ~~~~~-~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G 167 (254)
.-+. +.-.++..| ++|.|+||+.+-++--.++..+-+. |
T Consensus 151 -~l~~~~s~edll~g-nPdFvvDciDNidtKVdLL~y~~~~-~ 190 (430)
T KOG2018|consen 151 -MLWTSSSEEDLLSG-NPDFVVDCIDNIDTKVDLLEYCYNH-G 190 (430)
T ss_pred -hhcCCCchhhhhcC-CCCeEeEhhhhhhhhhHHHHHHHHc-C
Confidence 0000 001223344 7999999999865545666666555 5
No 372
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.034 Score=45.40 Aligned_cols=80 Identities=18% Similarity=0.222 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----Hh-c-CCc-eE--eCCCCCCCchHHHHHHHhhC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EA-F-GMT-DF--INPDDEPNKSISELVKGITH 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~-~-g~~-~v--~~~~~~~~~~~~~~i~~~~~ 138 (254)
.+.+++|+|+ |++|..+++.+...|+ +|+.++++.++.+.+ ++ . +.. .. .|..+ .++....+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~ 91 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS--LASVRAAADALRA 91 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHHh
Confidence 5678999987 9999999988888899 898888887665432 11 1 111 11 23333 2333333333321
Q ss_pred -CCCccEEEEcCCC
Q 025336 139 -GMGVDYCFECTGV 151 (254)
Q Consensus 139 -~~~~d~v~d~~g~ 151 (254)
..++|++|.+.|.
T Consensus 92 ~~~~iD~li~nAg~ 105 (306)
T PRK06197 92 AYPRIDLLINNAGV 105 (306)
T ss_pred hCCCCCEEEECCcc
Confidence 2379999998873
No 373
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.26 E-value=0.11 Score=42.98 Aligned_cols=102 Identities=16% Similarity=0.174 Sum_probs=66.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHH-HHcCCCeEEEEcCCcccHHHHH-h----cCCceEeCCCCCCCchHHHHHHHhhCCCC
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGA-RMQGAAKIIGIDKNPWKKEKGE-A----FGMTDFINPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a-~~~g~~~v~~v~~~~~~~~~~~-~----~g~~~v~~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
+...+++|+|+|..|...+... ...++++|.+.++++++.+.+. + ++.. +..+ .+..+.+ ..
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~-----~~~~~~~------~~ 192 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV-----NSADEAI------EE 192 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe-----CCHHHHH------hc
Confidence 3567899999999998777554 4678889999999988776543 2 2332 1112 2233333 27
Q ss_pred ccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccH
Q 025336 142 VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNV 184 (254)
Q Consensus 142 ~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~ 184 (254)
.|+|+.|++....+ .. ..++++ -.+..+|........++.
T Consensus 193 aDiVi~aT~s~~p~-i~-~~l~~G-~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 193 ADIIVTVTNAKTPV-FS-EKLKKG-VHINAVGSFMPDMQELPS 232 (325)
T ss_pred CCEEEEccCCCCcc-hH-HhcCCC-cEEEecCCCCcccccCCH
Confidence 89999998865332 23 788887 788888876543344444
No 374
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.26 E-value=0.068 Score=43.13 Aligned_cols=76 Identities=21% Similarity=0.242 Sum_probs=54.8
Q ss_pred CCCCEEEEEcCCH-HHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 68 EKGSSVAVLGLGT-VGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 68 ~~~~~vlI~G~g~-~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
-+|.+++|+|.|. +|...+.++...|+ +|++..+. . .++.+.+ +.+|+++
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~-------------------t---~~L~~~~------~~aDIvI 207 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSR-------------------T---QNLPELV------KQADIIV 207 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCC-------------------c---hhHHHHh------ccCCEEE
Confidence 4788999999876 99999999999999 77776321 1 2222222 2889999
Q ss_pred EcCCChhHHHHHHHHcccCCcEEEEEccC
Q 025336 147 ECTGVPSLLSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 147 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 175 (254)
+++|.+..+. ...++++ ..++.+|..
T Consensus 208 ~AtG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 208 GAVGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred EccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 9998765333 3457887 788888754
No 375
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.25 E-value=0.046 Score=44.11 Aligned_cols=88 Identities=17% Similarity=0.246 Sum_probs=57.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCC
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 151 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~ 151 (254)
+|.|+|.|.+|...+..++..|. +|++.++++++.+.+.+.|.... .. .+. +.+ ...|+||-|+..
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~---~~---~~~-~~~------~~aDlVilavp~ 67 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDE---AS---TDL-SLL------KDCDLVILALPI 67 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccc---cc---CCH-hHh------cCCCEEEEcCCH
Confidence 58899999999998888888898 89999999888888877764211 11 111 111 267888888875
Q ss_pred hhH---HHHHHHHcccCCcEEEEEcc
Q 025336 152 PSL---LSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 152 ~~~---~~~~~~~l~~~~G~~v~~g~ 174 (254)
... ++.+...+.++ -.+..+++
T Consensus 68 ~~~~~~~~~l~~~l~~~-~ii~d~~S 92 (279)
T PRK07417 68 GLLLPPSEQLIPALPPE-AIVTDVGS 92 (279)
T ss_pred HHHHHHHHHHHHhCCCC-cEEEeCcc
Confidence 432 22333334444 44444443
No 376
>PRK07985 oxidoreductase; Provisional
Probab=96.25 E-value=0.1 Score=42.38 Aligned_cols=80 Identities=19% Similarity=0.068 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCc--ccHHHHH----hcCCce---EeCCCCCCCchHHHHHHHhhC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNP--WKKEKGE----AFGMTD---FINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~--~~~~~~~----~~g~~~---v~~~~~~~~~~~~~~i~~~~~ 138 (254)
++.++||+|+ |++|...++.+...|+ +|+.+.++. ++.+.+. +.+... ..|..+ .++....+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 124 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAHK 124 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4678999987 9999999999888999 888876543 2233222 233221 223333 2333333333321
Q ss_pred -CCCccEEEEcCCC
Q 025336 139 -GMGVDYCFECTGV 151 (254)
Q Consensus 139 -~~~~d~v~d~~g~ 151 (254)
..++|+++.+.|.
T Consensus 125 ~~g~id~lv~~Ag~ 138 (294)
T PRK07985 125 ALGGLDIMALVAGK 138 (294)
T ss_pred HhCCCCEEEECCCC
Confidence 2378999988763
No 377
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=96.24 E-value=0.058 Score=46.38 Aligned_cols=103 Identities=13% Similarity=0.193 Sum_probs=65.0
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCc-eE--eCCCCCCCchHHHHHHH
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMT-DF--INPDDEPNKSISELVKG 135 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~~~i~~ 135 (254)
....+++|++||=.|+|+ |..++.+++..+..+|++++.++++.+.+++ +|.. .+ .+... .... .
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~~----~ 303 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGPS----Q 303 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---cccc----c
Confidence 445678899999888754 5555566666553389999999998887653 5654 22 22111 1110 0
Q ss_pred hhCCCCccEEE-E--cCCC-------------------------hhHHHHHHHHcccCCcEEEEEcc
Q 025336 136 ITHGMGVDYCF-E--CTGV-------------------------PSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 136 ~~~~~~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
......||.|+ | |+|. ...+..+++.++++ |+++....
T Consensus 304 ~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc 369 (426)
T TIGR00563 304 WAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC 369 (426)
T ss_pred cccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 11223799998 4 5542 12567788899999 99887644
No 378
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.24 E-value=0.051 Score=43.00 Aligned_cols=80 Identities=21% Similarity=0.277 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccc--HHHHHhcCCce---EeCCCCCCCchHHHHHHHhhC-CCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWK--KEKGEAFGMTD---FINPDDEPNKSISELVKGITH-GMG 141 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~--~~~~~~~g~~~---v~~~~~~~~~~~~~~i~~~~~-~~~ 141 (254)
++.++||+|+ +++|.+.++.+...|+ +|+++++++.. .+.+++.+... ..|..+ .++..+.+.+... ..+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence 4688999986 8999999999999999 88888765421 22233444322 234443 2333333333221 127
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|+++++.|.
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 379
>PLN03075 nicotianamine synthase; Provisional
Probab=96.24 E-value=0.029 Score=45.29 Aligned_cols=98 Identities=11% Similarity=0.108 Sum_probs=64.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHhcC-C----ceEeCCCCCCCchHHHHHHHhhCCCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEAFG-M----TDFINPDDEPNKSISELVKGITHGMGV 142 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~~g-~----~~v~~~~~~~~~~~~~~i~~~~~~~~~ 142 (254)
+.++|+-+|+|+.+..++-+++.... .+++.+|.+++..+.+++.- . ..-+.... .+..+. .....+|
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~---~~~l~~F 196 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDV---TESLKEY 196 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhc---ccccCCc
Confidence 67889999999888888888765432 37999999999998887643 1 11111111 222221 1112389
Q ss_pred cEEEEcC-------CChhHHHHHHHHcccCCcEEEEEc
Q 025336 143 DYCFECT-------GVPSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 143 d~v~d~~-------g~~~~~~~~~~~l~~~~G~~v~~g 173 (254)
|+||-.+ .....++.+.+.++++ |.++.=.
T Consensus 197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 9999654 2234678899999998 8876543
No 380
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.037 Score=44.46 Aligned_cols=78 Identities=19% Similarity=0.204 Sum_probs=50.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCC--c-eE--eCCCCCCCchHHHHHHHhh-C
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGM--T-DF--INPDDEPNKSISELVKGIT-H 138 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~--~-~v--~~~~~~~~~~~~~~i~~~~-~ 138 (254)
+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. .+. . .+ .|..+ .+++.. +.+.. .
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 567899987 9999999998888899 89999888766554422 221 1 12 24433 233333 44332 1
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
..++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 2378999998874
No 381
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.092 Score=41.45 Aligned_cols=79 Identities=15% Similarity=0.176 Sum_probs=47.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCCcccHHHH-Hh---cCCc-eE--eCCCCCCCchHHHHHHHhh---
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGI-DKNPWKKEKG-EA---FGMT-DF--INPDDEPNKSISELVKGIT--- 137 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v-~~~~~~~~~~-~~---~g~~-~v--~~~~~~~~~~~~~~i~~~~--- 137 (254)
+.+++|+|+ |.+|..+++.+...|+ +|++. .++.++.+.. .. .+.. .+ .|..+ .+++...+.+..
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS--IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC--HHHHHHHHHHHHHHh
Confidence 578999986 9999999998888899 77664 5655444322 22 2221 12 24333 233333333332
Q ss_pred ----CCCCccEEEEcCCC
Q 025336 138 ----HGMGVDYCFECTGV 151 (254)
Q Consensus 138 ----~~~~~d~v~d~~g~ 151 (254)
+..++|++|.+.|.
T Consensus 83 ~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGI 100 (254)
T ss_pred ccccCCCCccEEEECCCC
Confidence 11369999998874
No 382
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.23 E-value=0.039 Score=42.59 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKN 103 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~ 103 (254)
+..+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35689999999999999999999999889999887
No 383
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=96.23 E-value=0.1 Score=39.98 Aligned_cols=100 Identities=18% Similarity=0.145 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhhCCCCccE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGITHGMGVDY 144 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~ 144 (254)
++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++ .+...+- ... .+....+........||.
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~---~d~~~~l~~~~~~~~~D~ 114 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLC---GDAVEVLLDMFPDGSLDR 114 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEe---cCHHHHHHHHcCccccce
Confidence 567899889875 7777788876543389999999998888764 2322211 111 223223332222337999
Q ss_pred EEEcCC--------------ChhHHHHHHHHcccCCcEEEEEcc
Q 025336 145 CFECTG--------------VPSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 145 v~d~~g--------------~~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
++-... ....+..+.+.++++ |.++....
T Consensus 115 V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~~ 157 (202)
T PRK00121 115 IYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFATD 157 (202)
T ss_pred EEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEcC
Confidence 875322 133678889999999 99887643
No 384
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.22 E-value=0.061 Score=41.03 Aligned_cols=34 Identities=21% Similarity=0.408 Sum_probs=30.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025336 70 GSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKN 103 (254)
Q Consensus 70 ~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~ 103 (254)
..+|+|.|+|++|.-.++.+-..|.++++.+|.+
T Consensus 19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4789999999999999999999999888888765
No 385
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.22 E-value=0.039 Score=44.39 Aligned_cols=105 Identities=15% Similarity=0.198 Sum_probs=64.8
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCcc---cHHHH-HhcCCceE--eCCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGL---GTVGLGAVDGARMQGAAKIIGIDKNPW---KKEKG-EAFGMTDF--INPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~---g~~G~~~~~~a~~~g~~~v~~v~~~~~---~~~~~-~~~g~~~v--~~~~~~~~~~~~~~i~~~~~- 138 (254)
.+.++||+|+ +++|+++++.+...|+ +|+.++++++ +.+.+ ++++.... .|..+ .+.....+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 4678999986 4899999998888999 8888877742 22222 33443222 34443 2333333333322
Q ss_pred CCCccEEEEcCCCh--------------h---------------HHHHHHHHcccCCcEEEEEccCCC
Q 025336 139 GMGVDYCFECTGVP--------------S---------------LLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 139 ~~~~d~v~d~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
...+|+++++.|.. + ..+.++..+..+ |+++.+++..+
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~~ 147 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLGG 147 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCCC
Confidence 13799999998731 0 123455566677 89888776543
No 386
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.21 E-value=0.17 Score=37.06 Aligned_cols=82 Identities=11% Similarity=0.150 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 148 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~ 148 (254)
.|.+|+|.|+|.+|.--++.+...|+ +|++++ ++..+.+++++.-. +..+. +.+ .+-.++|+|+-+
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~-----~~~-----~dl~~a~lViaa 77 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT-----FSN-----DDIKDAHLIYAA 77 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc-----cCh-----hcCCCceEEEEC
Confidence 57899999999999998888888999 888873 44444444554221 22221 111 112378999999
Q ss_pred CCChhHHHHHHHHcccC
Q 025336 149 TGVPSLLSEALETTKVG 165 (254)
Q Consensus 149 ~g~~~~~~~~~~~l~~~ 165 (254)
++.. .++......+..
T Consensus 78 T~d~-e~N~~i~~~a~~ 93 (157)
T PRK06719 78 TNQH-AVNMMVKQAAHD 93 (157)
T ss_pred CCCH-HHHHHHHHHHHH
Confidence 9887 456555555444
No 387
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=96.21 E-value=0.034 Score=44.26 Aligned_cols=93 Identities=19% Similarity=0.248 Sum_probs=61.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhc----CCc---eEeCCCCCCCchHHHHHHHhhCCC
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAF----GMT---DFINPDDEPNKSISELVKGITHGM 140 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~----g~~---~v~~~~~~~~~~~~~~i~~~~~~~ 140 (254)
.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++. |.. .++. .+..+ +..... .
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~------~d~~~-l~~~~~-~ 111 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH------CAAQD-IAQHLE-T 111 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE------cCHHH-HhhhcC-C
Confidence 4567889888764 7777788775 77 899999999988887653 321 1221 11211 222223 3
Q ss_pred CccEEEEcC-----CC-hhHHHHHHHHcccCCcEEEEE
Q 025336 141 GVDYCFECT-----GV-PSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 141 ~~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~ 172 (254)
.||+|+... .. ...+..+.+.++|+ |.++.+
T Consensus 112 ~fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 112 PVDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred CCCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 799998532 22 23578889999999 998765
No 388
>PRK06153 hypothetical protein; Provisional
Probab=96.21 E-value=0.023 Score=47.45 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKN 103 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~ 103 (254)
++.+|+|.|+|++|..+++.+-..|.++++.+|.+
T Consensus 175 ~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D 209 (393)
T PRK06153 175 EGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD 209 (393)
T ss_pred hhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence 46789999999999999999999999899998776
No 389
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=96.20 E-value=0.096 Score=43.88 Aligned_cols=95 Identities=14% Similarity=0.210 Sum_probs=61.0
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHc--CCCeEEEEcC--CcccHH-HHHhcCCceEeCCCCCCCchHHHHH-----------
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQ--GAAKIIGIDK--NPWKKE-KGEAFGMTDFINPDDEPNKSISELV----------- 133 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~--g~~~v~~v~~--~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~i----------- 133 (254)
.+|.|+|+ |++|..+++..+.. .+ +|++... +.+++. .++++++..+.-.++ .....+
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~----~~~~~l~~~l~~~~~~v 76 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADE----EAAKELKEALAAAGIEV 76 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHhhccCCceE
Confidence 46899996 99999999988755 46 7777743 333333 356788776554332 222222
Q ss_pred -------HHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEE
Q 025336 134 -------KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV 171 (254)
Q Consensus 134 -------~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 171 (254)
.++.....+|+|+.++.+...+.-.+.+++.+ -++.+
T Consensus 77 ~~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 77 LAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred EEChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 22223336999999998766677788888775 44433
No 390
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.20 E-value=0.053 Score=42.89 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce-E--eCCCCCCCchHHHHHHHhh-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD-F--INPDDEPNKSISELVKGIT-HG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~i~~~~-~~ 139 (254)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +..+... . .|..+ .+.+...+.++. ..
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH--KQEVEAAIEHIEKDI 84 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC--HHHHHHHHHHHHHhc
Confidence 4678999986 9999999998888999 899998887655443 2223221 2 23333 233333333321 11
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++.+.|.
T Consensus 85 ~~id~vi~~ag~ 96 (254)
T PRK08085 85 GPIDVLINNAGI 96 (254)
T ss_pred CCCCEEEECCCc
Confidence 379999999874
No 391
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.20 E-value=0.053 Score=47.41 Aligned_cols=69 Identities=28% Similarity=0.322 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcc-----cHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCcc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPW-----KKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVD 143 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~-----~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d 143 (254)
.+.+|+|+|+|.+|+.++.+++..|. +|++++..+. ..+.+++.|......... . ....+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~----------~~~~~D 80 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T----------LPEDTD 80 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c----------ccCCCC
Confidence 56789999999999999999999999 8999876542 123455667654443321 1 012678
Q ss_pred EEEEcCCC
Q 025336 144 YCFECTGV 151 (254)
Q Consensus 144 ~v~d~~g~ 151 (254)
+|+-+.|-
T Consensus 81 ~Vv~s~Gi 88 (480)
T PRK01438 81 LVVTSPGW 88 (480)
T ss_pred EEEECCCc
Confidence 88887775
No 392
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.19 E-value=0.039 Score=43.43 Aligned_cols=79 Identities=25% Similarity=0.213 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCc-eEe--CCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMT-DFI--NPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.++||+|+ |.+|..+++.+...|+ +|+.++++.++...+. ..+.. .++ |..+ .+.+.+.+.++.. .
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD--RDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 9999999999999999 8999988876554432 22322 122 3322 2333333333321 1
Q ss_pred CCccEEEEcCC
Q 025336 140 MGVDYCFECTG 150 (254)
Q Consensus 140 ~~~d~v~d~~g 150 (254)
.++|++|.+.|
T Consensus 79 ~~~d~vi~~ag 89 (250)
T TIGR03206 79 GPVDVLVNNAG 89 (250)
T ss_pred CCCCEEEECCC
Confidence 27899999887
No 393
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.038 Score=43.66 Aligned_cols=80 Identities=16% Similarity=0.104 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCc-eE--eCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMT-DF--INPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ .+.. .. .|..+ ..+....+.+... -
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERH 83 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 3568999986 9999999999999999 99999888765544322 2321 12 23333 1223333333221 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
..+|+++++.|.
T Consensus 84 ~~id~li~~ag~ 95 (252)
T PRK07035 84 GRLDILVNNAAA 95 (252)
T ss_pred CCCCEEEECCCc
Confidence 268999998873
No 394
>PRK08589 short chain dehydrogenase; Validated
Probab=96.19 E-value=0.036 Score=44.43 Aligned_cols=79 Identities=16% Similarity=0.258 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHH-HH---hcCCc-e--EeCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEK-GE---AFGMT-D--FINPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~-~~---~~g~~-~--v~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.++||+|+ +++|...++.+...|+ +|++++++ ++.+. ++ +.+.. . ..|..+ ..+....+.+... .
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQF 80 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence 4678999987 8999999988888999 89999888 44332 22 22321 1 234333 2333333333321 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++++.|.
T Consensus 81 g~id~li~~Ag~ 92 (272)
T PRK08589 81 GRVDVLFNNAGV 92 (272)
T ss_pred CCcCEEEECCCC
Confidence 279999998874
No 395
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.19 E-value=0.18 Score=39.95 Aligned_cols=100 Identities=15% Similarity=0.182 Sum_probs=63.5
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC-ceEeCCCCCCCchHHHHHHHhhCCCC
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM-TDFINPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
......++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+.+++... ..++.. +... + .. ....
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~------d~~~-~-~~-~~~~ 103 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAG------DIES-L-PL-ATAT 103 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEc------Cccc-C-cC-CCCc
Confidence 334444677899999865 655555554 577 89999999998888877542 122211 1111 0 11 2237
Q ss_pred ccEEEEcCC------ChhHHHHHHHHcccCCcEEEEEccC
Q 025336 142 VDYCFECTG------VPSLLSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 142 ~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~~ 175 (254)
||+|+.... ....+..+.+.++++ |.++.....
T Consensus 104 fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~~ 142 (251)
T PRK10258 104 FDLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTLV 142 (251)
T ss_pred EEEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence 999986432 123578888999999 998876544
No 396
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.18 E-value=0.051 Score=43.43 Aligned_cols=79 Identities=18% Similarity=0.241 Sum_probs=48.2
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCceE--eCCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGLG---TVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTDF--INPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~g---~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v--~~~~~~~~~~~~~~i~~~~~- 138 (254)
++.++||+|++ ++|.+.++.+...|+ +|+.++++++..+.+++ .+.... .|-.+ +++....+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 81 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE--DASIDAMFAELGKV 81 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC--HHHHHHHHHHHHhh
Confidence 46789999863 799999988888999 88888776321222222 222122 23333 2334444443322
Q ss_pred CCCccEEEEcCC
Q 025336 139 GMGVDYCFECTG 150 (254)
Q Consensus 139 ~~~~d~v~d~~g 150 (254)
..++|+++++.|
T Consensus 82 ~g~iD~linnAg 93 (262)
T PRK07984 82 WPKFDGFVHSIG 93 (262)
T ss_pred cCCCCEEEECCc
Confidence 126999999987
No 397
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.18 E-value=0.044 Score=46.53 Aligned_cols=82 Identities=18% Similarity=0.259 Sum_probs=51.6
Q ss_pred cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHH-------HHHhc-CCceE-eCCCCCCCchHHHHHH
Q 025336 65 AEVEKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKE-------KGEAF-GMTDF-INPDDEPNKSISELVK 134 (254)
Q Consensus 65 ~~~~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~-------~~~~~-g~~~v-~~~~~~~~~~~~~~i~ 134 (254)
.....+.+|||+|+ |.+|..+++.+...|. +|++++++..+.+ ..+.. +...+ .|..+ .+.+...++
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~ 131 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLF 131 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHH
Confidence 34456789999987 9999999999888999 8999988765421 11112 22222 24443 122333333
Q ss_pred HhhCCCCccEEEEcCCC
Q 025336 135 GITHGMGVDYCFECTGV 151 (254)
Q Consensus 135 ~~~~~~~~d~v~d~~g~ 151 (254)
.. +.++|+||+|.+.
T Consensus 132 ~~--~~~~D~Vi~~aa~ 146 (390)
T PLN02657 132 SE--GDPVDVVVSCLAS 146 (390)
T ss_pred Hh--CCCCcEEEECCcc
Confidence 22 1269999998864
No 398
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.18 E-value=0.088 Score=41.48 Aligned_cols=75 Identities=19% Similarity=0.264 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc-eE--eCCCCCCCchHHHHHHHhhC-CCCcc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT-DF--INPDDEPNKSISELVKGITH-GMGVD 143 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~~~~d 143 (254)
++.++||+|+ |.+|...++.+...|+ +|++++++. .+..+.. .. .|..+ .+.+.+.+.+... ..++|
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 78 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD--AAAVAQVCQRLLAETGPLD 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 4678999987 8999999998888999 899987775 2222221 11 23332 1233333333221 12689
Q ss_pred EEEEcCCC
Q 025336 144 YCFECTGV 151 (254)
Q Consensus 144 ~v~d~~g~ 151 (254)
+++.+.|.
T Consensus 79 ~vi~~ag~ 86 (252)
T PRK08220 79 VLVNAAGI 86 (252)
T ss_pred EEEECCCc
Confidence 99998874
No 399
>PRK09186 flagellin modification protein A; Provisional
Probab=96.17 E-value=0.049 Score=43.03 Aligned_cols=79 Identities=20% Similarity=0.275 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-Hh----cCCc---e-EeCCCCCCCchHHHHHHHhhC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EA----FGMT---D-FINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~----~g~~---~-v~~~~~~~~~~~~~~i~~~~~ 138 (254)
++.++||+|+ |.+|...+..+...|+ +|+.+.+++++.+.+ ++ .+.. . ..|..+ ++.+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 4678999987 8999999999999999 899998887766543 22 2221 1 224433 2333333443321
Q ss_pred -CCCccEEEEcCC
Q 025336 139 -GMGVDYCFECTG 150 (254)
Q Consensus 139 -~~~~d~v~d~~g 150 (254)
..++|+++++.+
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 126999999885
No 400
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.12 Score=40.47 Aligned_cols=80 Identities=15% Similarity=0.092 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcc-cHH----HHHhcCCc-eE--eCCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPW-KKE----KGEAFGMT-DF--INPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~-~~~----~~~~~g~~-~v--~~~~~~~~~~~~~~i~~~~~- 138 (254)
++.++||+|+ |++|...++.+...|+ +++.+.++.+ ..+ .++..+.. .. .|..+ ..++.+.+.+...
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD--AAAVTRLFDAAETA 80 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHH
Confidence 4678999986 9999999999999999 7777655432 222 12233422 12 23332 2333333333211
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
..++|++|.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (245)
T PRK12937 81 FGRIDVLVNNAGV 93 (245)
T ss_pred cCCCCEEEECCCC
Confidence 1278999998874
No 401
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.14 E-value=0.045 Score=42.77 Aligned_cols=69 Identities=23% Similarity=0.313 Sum_probs=48.8
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcc--cHHHHHhcCCceEe-CCCCCCCchHHHHHHHhhCCCCccEEEEc
Q 025336 73 VAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPW--KKEKGEAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC 148 (254)
Q Consensus 73 vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~--~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~~~~d~v~d~ 148 (254)
|+|+|+ |.+|...++.+...+. +|.+..++.. ..+.++..|+..+. |+.+ .+ .+.+.- +++|.||.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~---~~---~l~~al--~g~d~v~~~ 71 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVEADYDD---PE---SLVAAL--KGVDAVFSV 71 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEES-TT----HH---HHHHHH--TTCSEEEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEeecccCC---HH---HHHHHH--cCCceEEee
Confidence 789997 9999999999999888 8888888763 35556778886542 3332 22 222222 289999998
Q ss_pred CC
Q 025336 149 TG 150 (254)
Q Consensus 149 ~g 150 (254)
++
T Consensus 72 ~~ 73 (233)
T PF05368_consen 72 TP 73 (233)
T ss_dssp SS
T ss_pred cC
Confidence 88
No 402
>KOG3201 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.13 E-value=0.012 Score=42.47 Aligned_cols=117 Identities=14% Similarity=0.082 Sum_probs=74.6
Q ss_pred hhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcC-------CceEeCCCCCCC
Q 025336 54 FTTGFGAAWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFG-------MTDFINPDDEPN 126 (254)
Q Consensus 54 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g-------~~~v~~~~~~~~ 126 (254)
-.-||..|. ....-.|.+|+-+|+|-+|++-+.+|...-...|..++.+++..+.+++.- -+.+-.-+-
T Consensus 15 eala~~~l~-~~n~~rg~~ilelgggft~laglmia~~a~~~~v~ltdgne~svrnv~ki~~~n~~s~~tsc~vlrw--- 90 (201)
T KOG3201|consen 15 EALAWTILR-DPNKIRGRRILELGGGFTGLAGLMIACKAPDSSVWLTDGNEESVRNVEKIRNSNMASSLTSCCVLRW--- 90 (201)
T ss_pred HHHHHHHHh-chhHHhHHHHHHhcCchhhhhhhheeeecCCceEEEecCCHHHHHHHHHHHhcccccccceehhhHH---
Confidence 334565653 333335788998999999999999999777669999999998888776521 111100000
Q ss_pred chHHHHHHHhhCCCCccEEE--EcCCC----hhHHHHHHHHcccCCcEEEEEccCCC
Q 025336 127 KSISELVKGITHGMGVDYCF--ECTGV----PSLLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 127 ~~~~~~i~~~~~~~~~d~v~--d~~g~----~~~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
.....+.. ..+..||+|+ ||.-- ++.+..+...++|. |+...+...-+
T Consensus 91 ~~~~aqsq--~eq~tFDiIlaADClFfdE~h~sLvdtIk~lL~p~-g~Al~fsPRRg 144 (201)
T KOG3201|consen 91 LIWGAQSQ--QEQHTFDIILAADCLFFDEHHESLVDTIKSLLRPS-GRALLFSPRRG 144 (201)
T ss_pred HHhhhHHH--HhhCcccEEEeccchhHHHHHHHHHHHHHHHhCcc-cceeEecCccc
Confidence 00111111 1233899998 77753 33566777889999 99777765444
No 403
>PRK09242 tropinone reductase; Provisional
Probab=96.12 E-value=0.052 Score=43.00 Aligned_cols=80 Identities=13% Similarity=0.140 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----c--CCce-E--eCCCCCCCchHHHHHHHhh-
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----F--GMTD-F--INPDDEPNKSISELVKGIT- 137 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~--g~~~-v--~~~~~~~~~~~~~~i~~~~- 137 (254)
.+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ . +... . .|..+ ..+....+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4678999987 8999999999999999 89999888766554322 1 2211 1 23332 123333333322
Q ss_pred CCCCccEEEEcCCC
Q 025336 138 HGMGVDYCFECTGV 151 (254)
Q Consensus 138 ~~~~~d~v~d~~g~ 151 (254)
.-.++|+++.+.|.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 12379999999974
No 404
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.12 E-value=0.11 Score=41.93 Aligned_cols=108 Identities=13% Similarity=0.065 Sum_probs=73.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcC---C--ceEeCCCCC-CCchHHHHHHHhhCCCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFG---M--TDFINPDDE-PNKSISELVKGITHGMG 141 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g---~--~~v~~~~~~-~~~~~~~~i~~~~~~~~ 141 (254)
++..|+|+|. ++.|..++.-+-..|. +|++..-+++..+.++..- . +..+|-.+. +.....+.+++..+..+
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 5667999997 9999999999999999 9999988887777665422 1 112333320 12233445555556667
Q ss_pred ccEEEEcCCCh--------------------------hHHHHHHHHcccCCcEEEEEccCCC
Q 025336 142 VDYCFECTGVP--------------------------SLLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 142 ~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
.-.++|+.|.. ......+.++++.+||+|.+++..+
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G 168 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG 168 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence 88899998831 1234555667765699999988766
No 405
>PLN00016 RNA-binding protein; Provisional
Probab=96.12 E-value=0.085 Score=44.58 Aligned_cols=97 Identities=13% Similarity=0.168 Sum_probs=60.0
Q ss_pred CCEEEEE----cC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHH-----------HHhcCCceEeCCCCCCCchHHHHH
Q 025336 70 GSSVAVL----GL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEK-----------GEAFGMTDFINPDDEPNKSISELV 133 (254)
Q Consensus 70 ~~~vlI~----G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~-----------~~~~g~~~v~~~~~~~~~~~~~~i 133 (254)
..+|||+ |+ |-+|..+++.+...|. +|+++++++..... +...+...+. .|..+ +
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d-~ 122 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD-V 122 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH-H
Confidence 4679999 97 9999999998888899 99999888654321 1122333332 22222 2
Q ss_pred HHhhCCCCccEEEEcCCCh-hHHHHHHHHcccC-CcEEEEEccC
Q 025336 134 KGITHGMGVDYCFECTGVP-SLLSEALETTKVG-KGKVIVIGVG 175 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~g~~-~~~~~~~~~l~~~-~G~~v~~g~~ 175 (254)
.+.....++|+|+++.+.. .....+++.+... -.++|.+++.
T Consensus 123 ~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 123 KSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred HhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 2222334899999988743 1244555655533 1267766643
No 406
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.12 E-value=0.055 Score=45.75 Aligned_cols=96 Identities=20% Similarity=0.238 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHH-HHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEK-GEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 147 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d 147 (254)
++.++||+|+|-+|..++..+...|..++++.-++.++... ++++|+. ++..+ ++...+ ..+|+||-
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~-----el~~~l------~~~DvVis 244 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE-----ELLEAL------AEADVVIS 244 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH-----HHHHhh------hhCCEEEE
Confidence 67889999999999999999999998799999888887764 5678844 33332 222222 27899999
Q ss_pred cCCChhH---HHHHHHHcccCCc-EEEEEccCC
Q 025336 148 CTGVPSL---LSEALETTKVGKG-KVIVIGVGV 176 (254)
Q Consensus 148 ~~g~~~~---~~~~~~~l~~~~G-~~v~~g~~~ 176 (254)
+++.+.. -....+.+...+. -+++++.+-
T Consensus 245 sTsa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 245 STSAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred ecCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 9887532 1233344444313 456666654
No 407
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.12 E-value=0.072 Score=44.08 Aligned_cols=95 Identities=19% Similarity=0.109 Sum_probs=63.3
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceE------eCCCCCCCchHHHHHHHhhCCCCccE
Q 025336 71 SSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDF------INPDDEPNKSISELVKGITHGMGVDY 144 (254)
Q Consensus 71 ~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v------~~~~~~~~~~~~~~i~~~~~~~~~d~ 144 (254)
-+|.|+|+|.+|.+.+..+...|. +|.+.++++++.+.++..+.... +..+-....+..+.+ ...|+
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~------~~aD~ 77 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL------AGADF 77 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH------cCCCE
Confidence 368999999999999999888898 89999998887776665321100 000000001222211 27899
Q ss_pred EEEcCCChhHHHHHHHHcccCCcEEEEEcc
Q 025336 145 CFECTGVPSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 145 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
|+-|+... .++..++.++++ -.++.+..
T Consensus 78 Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 78 AVVAVPSK-ALRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEEECchH-HHHHHHHhcCcC-CEEEEEee
Confidence 99999987 468888888876 66666654
No 408
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=96.12 E-value=0.054 Score=43.91 Aligned_cols=92 Identities=17% Similarity=0.246 Sum_probs=55.1
Q ss_pred CEEEEEcCCHHHHH-HHHHHHHcCCCeEEEE-cCCcc--cHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 71 SSVAVLGLGTVGLG-AVDGARMQGAAKIIGI-DKNPW--KKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 71 ~~vlI~G~g~~G~~-~~~~a~~~g~~~v~~v-~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
-+|.|+|.|.+|.. +..+.+..+. ++.++ +.+++ .+++++++|....+ .++...+.. ..-..+|+||
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~-------~~ie~LL~~-~~~~dIDiVf 75 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA-------EGIDGLLAM-PEFDDIDIVF 75 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc-------CCHHHHHhC-cCCCCCCEEE
Confidence 46899999999986 4455555566 55544 44443 34567778754322 222222221 1113799999
Q ss_pred EcCCChhHHHHHHHHcccCCcEEEEE
Q 025336 147 ECTGVPSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 147 d~~g~~~~~~~~~~~l~~~~G~~v~~ 172 (254)
++++.....+.+..+...+ -.+++.
T Consensus 76 ~AT~a~~H~e~a~~a~eaG-k~VID~ 100 (302)
T PRK08300 76 DATSAGAHVRHAAKLREAG-IRAIDL 100 (302)
T ss_pred ECCCHHHHHHHHHHHHHcC-CeEEEC
Confidence 9999876666666666554 444443
No 409
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=96.11 E-value=0.031 Score=43.64 Aligned_cols=102 Identities=24% Similarity=0.316 Sum_probs=65.1
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHhc----CCce--EeCCCCCCCchHHHHHHH
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEAF----GMTD--FINPDDEPNKSISELVKG 135 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~~----g~~~--v~~~~~~~~~~~~~~i~~ 135 (254)
....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++. +.+. ++..+ ... + .
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d------~~~-~-~ 109 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGN------AME-L-P 109 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEec------hhc-C-C
Confidence 556778899999998764 6677788887642 2899999998887777542 2221 12111 111 0 1
Q ss_pred hhCCCCccEEEEcCC-----C-hhHHHHHHHHcccCCcEEEEEccC
Q 025336 136 ITHGMGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 136 ~~~~~~~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~~ 175 (254)
. ....||+|+-+.. . ...+..+.+.|+++ |+++.....
T Consensus 110 ~-~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~~ 153 (231)
T TIGR02752 110 F-DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLETS 153 (231)
T ss_pred C-CCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEECC
Confidence 1 2237999974321 1 23467788899999 999876543
No 410
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.065 Score=43.38 Aligned_cols=80 Identities=21% Similarity=0.197 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCc---------ccHHHH----HhcCCce-E--eCCCCCCCchHHH
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNP---------WKKEKG----EAFGMTD-F--INPDDEPNKSISE 131 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~---------~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~ 131 (254)
++.++||+|+ +++|...++.+...|+ +|++++++. ++.+.+ +..+... . .|..+ .++...
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~v~~ 81 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD--WDGAAN 81 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC--HHHHHH
Confidence 5788999986 8999999988888999 888876654 333222 2233322 2 23332 233333
Q ss_pred HHHHhhC-CCCccEEEEcCCC
Q 025336 132 LVKGITH-GMGVDYCFECTGV 151 (254)
Q Consensus 132 ~i~~~~~-~~~~d~v~d~~g~ 151 (254)
.+.+... ..++|+++++.|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 3333321 1379999998874
No 411
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.10 E-value=0.029 Score=44.16 Aligned_cols=80 Identities=19% Similarity=0.145 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce-Ee--CCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD-FI--NPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~-~ 139 (254)
.+.++||+|+ |.+|...+..+...|+ +|++++++.++...+ +..+... ++ |..+ ..++...+.+... .
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD--RAALKAAVAAGVEDF 81 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 4578999986 9999999988888899 899998886544332 2333221 22 3332 2333333333221 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
..+|.++.+.+.
T Consensus 82 ~~~d~vi~~ag~ 93 (251)
T PRK12826 82 GRLDILVANAGI 93 (251)
T ss_pred CCCCEEEECCCC
Confidence 278999998864
No 412
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.09 E-value=0.072 Score=47.53 Aligned_cols=74 Identities=11% Similarity=0.140 Sum_probs=56.0
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeC-CCCCCCchHHHHHHHhhCCCCccEEEEcC
Q 025336 71 SSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN-PDDEPNKSISELVKGITHGMGVDYCFECT 149 (254)
Q Consensus 71 ~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~-~~~~~~~~~~~~i~~~~~~~~~d~v~d~~ 149 (254)
++++|.|.|.+|+..++.++..|. +++++|.++++.+.+++.|...+.- ..+ ++ .+++ .+-..+|.++-++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~~---~~---~L~~-a~i~~a~~viv~~ 489 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAAN---EE---IMQL-AHLDCARWLLLTI 489 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCCC---HH---HHHh-cCccccCEEEEEc
Confidence 679999999999999999999999 8999999999999999888665442 222 22 2332 2334788888777
Q ss_pred CCh
Q 025336 150 GVP 152 (254)
Q Consensus 150 g~~ 152 (254)
++.
T Consensus 490 ~~~ 492 (558)
T PRK10669 490 PNG 492 (558)
T ss_pred CCh
Confidence 654
No 413
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.09 E-value=0.049 Score=43.74 Aligned_cols=79 Identities=18% Similarity=0.253 Sum_probs=48.8
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCc---ccHHHH-HhcCCceE--eCCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGL---GTVGLGAVDGARMQGAAKIIGIDKNP---WKKEKG-EAFGMTDF--INPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~---g~~G~~~~~~a~~~g~~~v~~v~~~~---~~~~~~-~~~g~~~v--~~~~~~~~~~~~~~i~~~~~- 138 (254)
.+.++||+|+ +++|.+.++.+...|+ +|+.+.+++ ++.+.+ ++++.... .|-.+ .++....+.++..
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 85 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD--EASIDAVFETLEKK 85 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC--HHHHHHHHHHHHHh
Confidence 5678999986 5899999999889999 888876653 223322 33453222 23332 2333333333322
Q ss_pred CCCccEEEEcCC
Q 025336 139 GMGVDYCFECTG 150 (254)
Q Consensus 139 ~~~~d~v~d~~g 150 (254)
..++|+++++.|
T Consensus 86 ~g~iD~lv~nAG 97 (272)
T PRK08159 86 WGKLDFVVHAIG 97 (272)
T ss_pred cCCCcEEEECCc
Confidence 237999999886
No 414
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.057 Score=42.48 Aligned_cols=78 Identities=15% Similarity=0.234 Sum_probs=50.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----c--CCc-eE--eCCCCCCCchHHHHHHHhhC-
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----F--GMT-DF--INPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~--g~~-~v--~~~~~~~~~~~~~~i~~~~~- 138 (254)
+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.. . +.. .+ .|..+ .+++...+.++..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 467999986 9999998888888898 89999888776654422 1 211 12 24443 2333333333321
Q ss_pred CCCccEEEEcCC
Q 025336 139 GMGVDYCFECTG 150 (254)
Q Consensus 139 ~~~~d~v~d~~g 150 (254)
-.++|+++.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 237999999886
No 415
>PLN00203 glutamyl-tRNA reductase
Probab=96.09 E-value=0.033 Score=48.83 Aligned_cols=72 Identities=17% Similarity=0.228 Sum_probs=51.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcC-Cce-EeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 70 GSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFG-MTD-FINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 70 ~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g-~~~-v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
+.+|+|+|+|.+|.++++.+...|+.+|+++.++.++.+.+. .++ ... +... .+..+.+ ...|+||
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~-----~dl~~al------~~aDVVI 334 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL-----DEMLACA------AEADVVF 334 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH-----hhHHHHH------hcCCEEE
Confidence 678999999999999999999999878999999988876654 353 221 1111 1122221 2789999
Q ss_pred EcCCCh
Q 025336 147 ECTGVP 152 (254)
Q Consensus 147 d~~g~~ 152 (254)
.|++.+
T Consensus 335 sAT~s~ 340 (519)
T PLN00203 335 TSTSSE 340 (519)
T ss_pred EccCCC
Confidence 998754
No 416
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=96.08 E-value=0.26 Score=39.87 Aligned_cols=59 Identities=17% Similarity=0.264 Sum_probs=45.3
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcC---CcccHHHHHhcCCceEeCCC
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDK---NPWKKEKGEAFGMTDFINPD 122 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~---~~~~~~~~~~~g~~~v~~~~ 122 (254)
..+.+++|.+|+=-=+|++|...+.+++.+|+ +++.+-. +.++...++.+|+..+....
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 56679999954433359999999999999999 5655533 56888899999998776554
No 417
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.08 E-value=0.035 Score=45.44 Aligned_cols=98 Identities=10% Similarity=0.094 Sum_probs=58.5
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhc-CCceEeCCCCCCCchHHHHHHHh--hCCCCccEEEE
Q 025336 71 SSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAF-GMTDFINPDDEPNKSISELVKGI--THGMGVDYCFE 147 (254)
Q Consensus 71 ~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~i~~~--~~~~~~d~v~d 147 (254)
-+|+|+|+|++|.+..-.+...|. .|..+.+.+++.+..++. |.. +..... .....+... .....+|++|-
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~----~~~~~~~~~~~~~~~~~D~viv 76 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ----ASLYAIPAETADAAEPIHRLLL 76 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc----ceeeccCCCCcccccccCEEEE
Confidence 369999999999987777777898 899998887777766543 321 111111 000000000 01137899999
Q ss_pred cCCChh---HHHHHHHHcccCCcEEEEEccC
Q 025336 148 CTGVPS---LLSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 148 ~~g~~~---~~~~~~~~l~~~~G~~v~~g~~ 175 (254)
|+=..+ .++.+...+.++ ..++.+-+.
T Consensus 77 ~vK~~~~~~al~~l~~~l~~~-t~vv~lQNG 106 (305)
T PRK05708 77 ACKAYDAEPAVASLAHRLAPG-AELLLLQNG 106 (305)
T ss_pred ECCHHhHHHHHHHHHhhCCCC-CEEEEEeCC
Confidence 886542 334444556666 666666543
No 418
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.07 E-value=0.059 Score=42.72 Aligned_cols=79 Identities=18% Similarity=0.275 Sum_probs=51.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCc-eE--eCCCCCCCchHHHHHHHhhC-CCCcc
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMT-DF--INPDDEPNKSISELVKGITH-GMGVD 143 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~~~~d 143 (254)
+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ ++.. .. .|-.+ ..+....+.++.. ..++|
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR--QDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 578999987 9999999999998999 89999888876665433 3321 11 23322 2333333333221 12799
Q ss_pred EEEEcCCC
Q 025336 144 YCFECTGV 151 (254)
Q Consensus 144 ~v~d~~g~ 151 (254)
+++.+.|.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998863
No 419
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.045 Score=43.24 Aligned_cols=76 Identities=20% Similarity=0.200 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC--ce-EeCCCCCCCchHHHHHHHhh-CCCCcc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM--TD-FINPDDEPNKSISELVKGIT-HGMGVD 143 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~--~~-v~~~~~~~~~~~~~~i~~~~-~~~~~d 143 (254)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++ +..+. .. ..|..+ .+++...+.+.. ...++|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 77 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLD 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 4688999986 8999999999888999 89999887654 11221 11 223333 123333333321 112789
Q ss_pred EEEEcCCC
Q 025336 144 YCFECTGV 151 (254)
Q Consensus 144 ~v~d~~g~ 151 (254)
++|.+.|.
T Consensus 78 ~vi~~ag~ 85 (252)
T PRK07856 78 VLVNNAGG 85 (252)
T ss_pred EEEECCCC
Confidence 99998873
No 420
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.05 E-value=0.057 Score=42.75 Aligned_cols=80 Identities=18% Similarity=0.205 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCc-eE--eCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMT-DF--INPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.+++|.|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.+.. .. .|..+ ..++...+.+... .
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5788999987 9999999988888899 899998887654432 223421 12 24333 2333333333322 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|.++.+.|.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 278999998874
No 421
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=96.05 E-value=0.006 Score=41.66 Aligned_cols=37 Identities=24% Similarity=0.342 Sum_probs=28.2
Q ss_pred CCCCCcccccCCceeeee---------------------------eccCcceeeEEecCCceEEc
Q 025336 1 MLDGTSRMSVRGQKLYHI---------------------------FSCSTWSEYMVIDANYVVRV 38 (254)
Q Consensus 1 ~g~~~~~~~~~Gd~v~~~---------------------------~~~g~~a~~~~v~~~~v~~~ 38 (254)
+|+++.+|++ ||+|... ..+|+|+||+++|++.++|+
T Consensus 46 vG~~v~~~~~-Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 46 VGPGVTDFKV-GDRVVVSPNIGCGECEYCLSGRPNLCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp ESTTTTSSGT-T-EEEEESEEETSSSHHHHTTTGGGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred eccccccccc-cceeeeecccCccCchhhcCCccccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 3778888999 9998631 11389999999999999875
No 422
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.04 E-value=0.077 Score=41.50 Aligned_cols=79 Identities=13% Similarity=0.236 Sum_probs=50.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce-Ee--CCCCCCCchHHHHHHHhhC-CC
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD-FI--NPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
+.+++|.|+ |.+|..++..+...|+ +|+.+++++++.+.. +..+... ++ |..+ ..++...+++... ..
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD--YEEVTAAIEQLKNELG 83 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 578999986 8999999998889999 899998887655433 2223221 12 3322 2333333333221 23
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
++|++|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (239)
T PRK07666 84 SIDILINNAGI 94 (239)
T ss_pred CccEEEEcCcc
Confidence 78999998874
No 423
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.04 E-value=0.11 Score=42.26 Aligned_cols=43 Identities=26% Similarity=0.329 Sum_probs=36.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM 115 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~ 115 (254)
+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|.
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~ 46 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA 46 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 68899999999988888888898 89999999888877766664
No 424
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.03 E-value=0.048 Score=43.16 Aligned_cols=80 Identities=21% Similarity=0.221 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcc--cHHHHHhcCCce-E--eCCCCCCCchHHHHHHHhhC-CCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPW--KKEKGEAFGMTD-F--INPDDEPNKSISELVKGITH-GMG 141 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~--~~~~~~~~g~~~-v--~~~~~~~~~~~~~~i~~~~~-~~~ 141 (254)
++.++||+|+ |++|..+++.+...|+ +|+.+++.+. ..+.+++.+... . .|-.+ .++....+.+... ..+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK--IDGIPALLERAVAEFGH 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhCC
Confidence 3678999986 8999999999999999 8888765432 122333344221 1 23322 2333333333221 137
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|+++++.|.
T Consensus 86 ~D~li~~Ag~ 95 (253)
T PRK08993 86 IDILVNNAGL 95 (253)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 425
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.03 E-value=0.043 Score=43.28 Aligned_cols=77 Identities=17% Similarity=0.220 Sum_probs=50.7
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh-cCCce-E--eCCCCCCCchHHHHHHHhhC-CCCccEE
Q 025336 72 SVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA-FGMTD-F--INPDDEPNKSISELVKGITH-GMGVDYC 145 (254)
Q Consensus 72 ~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~-~g~~~-v--~~~~~~~~~~~~~~i~~~~~-~~~~d~v 145 (254)
+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.. ++... . .|-.+ .+++.+.+.++.. ..++|.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 5899986 9999999999999999 89999998877665533 34321 1 23333 1233333333221 1379999
Q ss_pred EEcCCC
Q 025336 146 FECTGV 151 (254)
Q Consensus 146 ~d~~g~ 151 (254)
+.+.|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 998864
No 426
>PLN02253 xanthoxin dehydrogenase
Probab=96.03 E-value=0.044 Score=44.05 Aligned_cols=80 Identities=18% Similarity=0.106 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcCC--c-e--EeCCCCCCCchHHHHHHHhhC-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFGM--T-D--FINPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g~--~-~--v~~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
.+.++||+|+ |++|...++.+...|+ +|++++++++..+.+ .+++. . . ..|..+ .+...+.+.+... ..
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 3678999986 9999999988888899 899998876554433 22321 1 1 124333 1233333332211 12
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
++|+++++.|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 427
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=96.02 E-value=0.027 Score=44.51 Aligned_cols=96 Identities=15% Similarity=0.120 Sum_probs=64.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC----------ceEeCCCCCCCchHHHHHHHhhC
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM----------TDFINPDDEPNKSISELVKGITH 138 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~----------~~v~~~~~~~~~~~~~~i~~~~~ 138 (254)
+.++|||+|+|. |..+-+++++....+|.+++.+++-.+.++++-. -.++. .|....+++...
T Consensus 76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~------~Dg~~~l~~~~~ 148 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII------GDGRKFLKETQE 148 (246)
T ss_dssp ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE------STHHHHHHTSSS
T ss_pred CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE------hhhHHHHHhccC
Confidence 568999998654 5666777787766699999999998888877421 12221 456666666443
Q ss_pred CCCccEEE-EcCCC---------hhHHHHHHHHcccCCcEEEEEc
Q 025336 139 GMGVDYCF-ECTGV---------PSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 139 ~~~~d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g 173 (254)
. .||+++ |.... ...++.+.+.|+++ |.++.-.
T Consensus 149 ~-~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 149 E-KYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp T--EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred C-cccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 3 899998 55541 23577888999999 9888654
No 428
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].
Probab=96.02 E-value=0.083 Score=39.68 Aligned_cols=73 Identities=22% Similarity=0.222 Sum_probs=56.4
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEE
Q 025336 66 EVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 145 (254)
Q Consensus 66 ~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v 145 (254)
-+++|++||=+|.|. |.+...+-...++ ..++++.++++...+.+.|.. |+. .|+.+.+....++ .||+|
T Consensus 10 ~I~pgsrVLDLGCGd-G~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq------~Dld~gL~~f~d~-sFD~V 79 (193)
T PF07021_consen 10 WIEPGSRVLDLGCGD-GELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQ------GDLDEGLADFPDQ-SFDYV 79 (193)
T ss_pred HcCCCCEEEecCCCc-hHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEE------CCHHHhHhhCCCC-CccEE
Confidence 367899999999874 6677677777889 999999999999988888876 443 4455566666554 89999
Q ss_pred EEc
Q 025336 146 FEC 148 (254)
Q Consensus 146 ~d~ 148 (254)
|-+
T Consensus 80 Ils 82 (193)
T PF07021_consen 80 ILS 82 (193)
T ss_pred ehH
Confidence 843
No 429
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.02 E-value=0.13 Score=41.48 Aligned_cols=44 Identities=27% Similarity=0.355 Sum_probs=39.1
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCccc-HHHHHhcCCc
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWK-KEKGEAFGMT 116 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~-~~~~~~~g~~ 116 (254)
+|..+|.|.+|.-+++=+...|. .|.+.++++++ .+.++..|+.
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~ 46 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGAT 46 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCc
Confidence 57888999999999999999999 99999999999 8888887765
No 430
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.02 E-value=0.031 Score=44.34 Aligned_cols=79 Identities=19% Similarity=0.230 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH---hcCCce---EeCCCCCCCchHHHHHHHhhC-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE---AFGMTD---FINPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
++.++||+|+ |++|..+++.+...|+ +|+.+++++...+..+ ..+.+. ..|..+ .++....+.+... ..
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 3678999986 9999999999888999 8999888753322222 234321 224333 1233333333221 12
Q ss_pred CccEEEEcCC
Q 025336 141 GVDYCFECTG 150 (254)
Q Consensus 141 ~~d~v~d~~g 150 (254)
++|+++++.|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 7999999887
No 431
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.01 E-value=0.06 Score=43.34 Aligned_cols=79 Identities=20% Similarity=0.222 Sum_probs=56.9
Q ss_pred CCCCEEEEEcC-CHHHHH-HHHHHHHcCCCeEEEEcCCcccHHHHHh-----cCC---ceEeCCCCCCCch-HHHHHHHh
Q 025336 68 EKGSSVAVLGL-GTVGLG-AVDGARMQGAAKIIGIDKNPWKKEKGEA-----FGM---TDFINPDDEPNKS-ISELVKGI 136 (254)
Q Consensus 68 ~~~~~vlI~G~-g~~G~~-~~~~a~~~g~~~v~~v~~~~~~~~~~~~-----~g~---~~v~~~~~~~~~~-~~~~i~~~ 136 (254)
+.|++.+|.|+ .++|.. +-++|| .|. +|+.+.|+++|++..++ .++ ..++|..+ ++ ..+.+++.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~---~~~~ye~i~~~ 121 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK---GDEVYEKLLEK 121 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC---CchhHHHHHHH
Confidence 35688899998 799977 456666 999 89999999999987643 442 23566665 33 35556665
Q ss_pred hCCCCccEEEEcCCC
Q 025336 137 THGMGVDYCFECTGV 151 (254)
Q Consensus 137 ~~~~~~d~v~d~~g~ 151 (254)
..+-.+-+.++++|-
T Consensus 122 l~~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 122 LAGLDVGILVNNVGM 136 (312)
T ss_pred hcCCceEEEEecccc
Confidence 555578888999985
No 432
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=96.01 E-value=0.082 Score=37.66 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=28.0
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccH
Q 025336 73 VAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKK 107 (254)
Q Consensus 73 vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~ 107 (254)
++|.|+|.++++.+++++.+|+ +|++++..+++.
T Consensus 1 L~I~GaG~va~al~~la~~lg~-~v~v~d~r~e~~ 34 (136)
T PF13478_consen 1 LVIFGAGHVARALARLAALLGF-RVTVVDPRPERF 34 (136)
T ss_dssp EEEES-STCHHHHHHHHHHCTE-EEEEEES-CCC-
T ss_pred CEEEeCcHHHHHHHHHHHhCCC-EEEEEcCCcccc
Confidence 4677999999999999999999 999998887755
No 433
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.01 E-value=0.12 Score=41.87 Aligned_cols=94 Identities=17% Similarity=0.228 Sum_probs=65.1
Q ss_pred cccchhhhhhHHHHHhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCC
Q 025336 49 FLSCGFTTGFGAAWKEAEV-EKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPN 126 (254)
Q Consensus 49 ~~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~ 126 (254)
.+||+....+..| +.-++ -.|.+|.|+|. +.+|.-++.++...|+ .|++..+..
T Consensus 138 ~~PcTp~aii~lL-~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t---------------------- 193 (301)
T PRK14194 138 LTPCTPSGCLRLL-EDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRS---------------------- 193 (301)
T ss_pred CCCCcHHHHHHHH-HHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCC----------------------
Confidence 4566655555555 33343 47999999997 6999999999999999 888763321
Q ss_pred chHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccC
Q 025336 127 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 127 ~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 175 (254)
.+..+.+ +..|+++-++|.+..+...+ ++++ ..++.+|..
T Consensus 194 ~~l~e~~------~~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 194 TDAKALC------RQADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred CCHHHHH------hcCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 1122222 16799999999876655554 8887 888888854
No 434
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.053 Score=44.41 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=29.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKN 103 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~ 103 (254)
.+.+++|+|+ +++|.++++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4678999987 8999999999999999 89888876
No 435
>PLN02256 arogenate dehydrogenase
Probab=96.00 E-value=0.18 Score=41.18 Aligned_cols=91 Identities=12% Similarity=0.222 Sum_probs=58.2
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEE
Q 025336 67 VEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 146 (254)
Q Consensus 67 ~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 146 (254)
-.+..+|.|+|.|.+|...+..++..|. +|+++++++. .+.++.+|... . . +..+.+ . ...|+|+
T Consensus 33 ~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~--~-----~~~e~~----~-~~aDvVi 97 (304)
T PLN02256 33 KSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F--R-----DPDDFC----E-EHPDVVL 97 (304)
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e--C-----CHHHHh----h-CCCCEEE
Confidence 3356789999999999999998888888 8999888763 45566666531 1 1 122211 1 1578888
Q ss_pred EcCCChhHHHHHHHH-----cccCCcEEEEEcc
Q 025336 147 ECTGVPSLLSEALET-----TKVGKGKVIVIGV 174 (254)
Q Consensus 147 d~~g~~~~~~~~~~~-----l~~~~G~~v~~g~ 174 (254)
-|+... .+...+.. +.++ ..++.+++
T Consensus 98 lavp~~-~~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 98 LCTSIL-STEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred EecCHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence 888765 33333332 3455 56666665
No 436
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.056 Score=42.79 Aligned_cols=79 Identities=16% Similarity=0.208 Sum_probs=50.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcC---Cce-EeCCCCCCCchHHHHHHHhh-CCCCc
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFG---MTD-FINPDDEPNKSISELVKGIT-HGMGV 142 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g---~~~-v~~~~~~~~~~~~~~i~~~~-~~~~~ 142 (254)
+.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+. .+. ... ..|..+ .+.+...+.+.. ...++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 467999987 8999999988888899 8999988877665432 221 111 123333 122223333321 11269
Q ss_pred cEEEEcCCC
Q 025336 143 DYCFECTGV 151 (254)
Q Consensus 143 d~v~d~~g~ 151 (254)
|.++.+.|.
T Consensus 79 d~vi~~ag~ 87 (257)
T PRK07074 79 DVLVANAGA 87 (257)
T ss_pred CEEEECCCC
Confidence 999999874
No 437
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.99 E-value=0.17 Score=41.70 Aligned_cols=39 Identities=26% Similarity=0.392 Sum_probs=33.9
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH
Q 025336 71 SSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG 110 (254)
Q Consensus 71 ~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~ 110 (254)
.+|.|+|+|.+|...++.+...|. +|+..+.+++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 579999999999999988889999 999999998766543
No 438
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.97 E-value=0.05 Score=49.07 Aligned_cols=93 Identities=17% Similarity=0.206 Sum_probs=65.2
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEe-CCCCCCCchHHHHHHHhhCCCCccEEEEc
Q 025336 70 GSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC 148 (254)
Q Consensus 70 ~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~~~~d~v~d~ 148 (254)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ |..+ .+. +++ .+-..+|.++-+
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat~---~~~---L~~-agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDATR---MDL---LES-AGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeCCC---HHH---HHh-cCCCcCCEEEEE
Confidence 3579999999999999999999999 899999999999999998865443 2222 332 322 343488999999
Q ss_pred CCChhHHH---HHHHHcccCCcEEEE
Q 025336 149 TGVPSLLS---EALETTKVGKGKVIV 171 (254)
Q Consensus 149 ~g~~~~~~---~~~~~l~~~~G~~v~ 171 (254)
+++...-. ...+...|+ -+++.
T Consensus 472 ~~d~~~n~~i~~~ar~~~p~-~~iia 496 (621)
T PRK03562 472 IDDPQTSLQLVELVKEHFPH-LQIIA 496 (621)
T ss_pred eCCHHHHHHHHHHHHHhCCC-CeEEE
Confidence 88753322 233344455 45443
No 439
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=95.97 E-value=0.075 Score=44.47 Aligned_cols=104 Identities=21% Similarity=0.362 Sum_probs=66.0
Q ss_pred HhcCCCCCCEEEEE-cC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH----hcCCce--EeCCCCCCCchHHHHHH
Q 025336 63 KEAEVEKGSSVAVL-GL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE----AFGMTD--FINPDDEPNKSISELVK 134 (254)
Q Consensus 63 ~~~~~~~~~~vlI~-G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~----~~g~~~--v~~~~~~~~~~~~~~i~ 134 (254)
....+++|++||=. ++ |+=-...+|+....|. .|++++.++.|+..++ ++|... ++...+ .....
T Consensus 150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~---~~~~~--- 222 (355)
T COG0144 150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDA---RRLAE--- 222 (355)
T ss_pred HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccc---ccccc---
Confidence 46778899999877 33 5433444455555566 7899999999988775 478764 333221 11111
Q ss_pred HhhCCCCccEEE-E--cCCC-------------------------hhHHHHHHHHcccCCcEEEEEcc
Q 025336 135 GITHGMGVDYCF-E--CTGV-------------------------PSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 135 ~~~~~~~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
....+..||.|+ | |+|. ...+..+++.++++ |+++....
T Consensus 223 ~~~~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~G-G~LVYSTC 289 (355)
T COG0144 223 LLPGGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPG-GVLVYSTC 289 (355)
T ss_pred cccccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEcc
Confidence 111222599887 5 6664 12578889999999 98876544
No 440
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.95 E-value=0.16 Score=40.02 Aligned_cols=104 Identities=14% Similarity=0.088 Sum_probs=59.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC-cccH----HHHHhcCCc-eE--eCCCCCCCchHHHHHHHhhC-C
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKN-PWKK----EKGEAFGMT-DF--INPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~-~~~~----~~~~~~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
+.++||+|+ |.+|...++-+...|+ +|+...++ .++. ..+++.+.. .. .|..+ ..+....+.++.. -
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDRY 82 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHHc
Confidence 578999986 8999999988888999 77665443 2222 122333332 12 23333 1222222322211 1
Q ss_pred CCccEEEEcCCC----------hh---------------HHHHHHHHcccCCcEEEEEccCCC
Q 025336 140 MGVDYCFECTGV----------PS---------------LLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 140 ~~~d~v~d~~g~----------~~---------------~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
.++|.+|.+.|. .+ ..+.+.+.+... |+++.+++...
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~~ 144 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVAG 144 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchhc
Confidence 278999999873 00 123344455666 89998887543
No 441
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.95 E-value=0.11 Score=36.36 Aligned_cols=92 Identities=22% Similarity=0.317 Sum_probs=50.8
Q ss_pred EEEEEcC-CHHHHHHHHHHHH-cCCCeEEEE-cCCcc---cHHHHHhcCCc--eEeCCCCCCCchHHHHHHHhhCCCCcc
Q 025336 72 SVAVLGL-GTVGLGAVDGARM-QGAAKIIGI-DKNPW---KKEKGEAFGMT--DFINPDDEPNKSISELVKGITHGMGVD 143 (254)
Q Consensus 72 ~vlI~G~-g~~G~~~~~~a~~-~g~~~v~~v-~~~~~---~~~~~~~~g~~--~v~~~~~~~~~~~~~~i~~~~~~~~~d 143 (254)
+|.|+|+ |-+|+..++.+.. .+. ++.++ +++++ ..+...-.|.. .+..+ . .+.+... .+|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~-~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~-----~----~l~~~~~--~~D 69 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGF-ELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT-----D----DLEELLE--EAD 69 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTE-EEEEEEETTTSTTTTSBCHHHCTSST-SSBEB-----S-----HHHHTT--H-S
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCc-EEEEEEecCCcccccchhhhhhCcCCcccccc-----h----hHHHhcc--cCC
Confidence 5889998 9999999999997 677 55544 34431 11111111211 11111 1 2233322 489
Q ss_pred EEEEcCCChhHHHHHHHHcccCCcEEEEEccCCC
Q 025336 144 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 177 (254)
Q Consensus 144 ~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 177 (254)
+++|++..+ .....++.+... |.-+++|..+-
T Consensus 70 VvIDfT~p~-~~~~~~~~~~~~-g~~~ViGTTG~ 101 (124)
T PF01113_consen 70 VVIDFTNPD-AVYDNLEYALKH-GVPLVIGTTGF 101 (124)
T ss_dssp EEEEES-HH-HHHHHHHHHHHH-T-EEEEE-SSS
T ss_pred EEEEcCChH-HhHHHHHHHHhC-CCCEEEECCCC
Confidence 999999544 566666666665 77777777654
No 442
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=95.94 E-value=0.055 Score=44.11 Aligned_cols=95 Identities=13% Similarity=0.071 Sum_probs=57.5
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCC-CchHHHHHHHhhCCCCccEEEEcCC
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEP-NKSISELVKGITHGMGVDYCFECTG 150 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~i~~~~~~~~~d~v~d~~g 150 (254)
+|+|+|+|.+|.+....+...|. +|..+++++++.+.+++.|... +..+.. .........+. ..+|++|-|+.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~---~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL---GPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc---CCCCEEEEecc
Confidence 58999999999998888888898 8999988877777776655421 100000 00000011111 38999999987
Q ss_pred ChhHHHHHHHH----cccCCcEEEEEcc
Q 025336 151 VPSLLSEALET----TKVGKGKVIVIGV 174 (254)
Q Consensus 151 ~~~~~~~~~~~----l~~~~G~~v~~g~ 174 (254)
.. .++.++.. +.++ ..++.+..
T Consensus 76 ~~-~~~~~~~~l~~~l~~~-~~iv~~~n 101 (304)
T PRK06522 76 AY-QLPAALPSLAPLLGPD-TPVLFLQN 101 (304)
T ss_pred cc-cHHHHHHHHhhhcCCC-CEEEEecC
Confidence 65 23444443 4344 45555543
No 443
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.94 E-value=0.051 Score=45.33 Aligned_cols=76 Identities=20% Similarity=0.181 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcC--C--ce-EeCCCCCCCchHHHHHHHhhCCCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFG--M--TD-FINPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g--~--~~-v~~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
++.+|||+|+ |.+|..+++.+...|. +|+++++++...... +.++ . .. ..|..+ .+ .+.++....+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~---~~~~~~~~~~ 75 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD---AA---KLRKAIAEFK 75 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC---HH---HHHHHHhhcC
Confidence 3678999986 9999999999999999 899988776543322 1121 1 11 123332 22 2222222236
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|++|++.+.
T Consensus 76 ~d~vih~A~~ 85 (349)
T TIGR02622 76 PEIVFHLAAQ 85 (349)
T ss_pred CCEEEECCcc
Confidence 8999998873
No 444
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.045 Score=43.93 Aligned_cols=80 Identities=21% Similarity=0.226 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccc-------HH----HHHhcCCce-E--eCCCCCCCchHHHHH
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWK-------KE----KGEAFGMTD-F--INPDDEPNKSISELV 133 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~-------~~----~~~~~g~~~-v--~~~~~~~~~~~~~~i 133 (254)
++.++||+|+ |++|...++.+...|+ +|++++++.+. .+ .++..+... + .|..+ .+...+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~ 81 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD--EDQVAAAV 81 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHH
Confidence 4578999987 9999999998888999 89998886542 11 122333321 1 34433 23333333
Q ss_pred HHhh-CCCCccEEEEcCCC
Q 025336 134 KGIT-HGMGVDYCFECTGV 151 (254)
Q Consensus 134 ~~~~-~~~~~d~v~d~~g~ 151 (254)
.+.. .-.++|++|++.|.
T Consensus 82 ~~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 82 AKAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHHhCCCCEEEECCCC
Confidence 3221 11279999998874
No 445
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.93 E-value=0.079 Score=41.69 Aligned_cols=84 Identities=20% Similarity=0.172 Sum_probs=51.5
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCc--eE--eCCCCCCCchHHHHHHHhh
Q 025336 67 VEKGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMT--DF--INPDDEPNKSISELVKGIT 137 (254)
Q Consensus 67 ~~~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~--~v--~~~~~~~~~~~~~~i~~~~ 137 (254)
..++.+++|.|+ |.+|...++.+...|+ +|++++++.++.+.+ ++.+.. .+ .|....+..++.+.+..+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 447889999986 9999999988888899 899998887654333 233321 11 2222101123333333222
Q ss_pred C-CCCccEEEEcCCC
Q 025336 138 H-GMGVDYCFECTGV 151 (254)
Q Consensus 138 ~-~~~~d~v~d~~g~ 151 (254)
. ..++|.++.+.+.
T Consensus 88 ~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQFGRLDGVLHNAGL 102 (247)
T ss_pred HHhCCCCEEEECCcc
Confidence 1 1379999988764
No 446
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.92 E-value=0.075 Score=42.68 Aligned_cols=101 Identities=13% Similarity=0.063 Sum_probs=60.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc--eEeCCCCC--CCchHHHHHHHhhCCCCccE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT--DFINPDDE--PNKSISELVKGITHGMGVDY 144 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~--~v~~~~~~--~~~~~~~~i~~~~~~~~~d~ 144 (254)
..++||++|+|. |..+..+++.....++++++.+++-.+.++++-.. ..++.... -..+..+.+++. ...||+
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~--~~~yDv 148 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADT--ENTFDV 148 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhC--CCCccE
Confidence 345999998764 55566677766555899999998877777663110 00110000 002333344332 238999
Q ss_pred EE-EcC---C------ChhHHHHHHHHcccCCcEEEEEc
Q 025336 145 CF-ECT---G------VPSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 145 v~-d~~---g------~~~~~~~~~~~l~~~~G~~v~~g 173 (254)
|+ |.. + ....++.+.+.|+++ |.++...
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 98 443 1 122456888899999 9988764
No 447
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.92 E-value=0.078 Score=43.40 Aligned_cols=80 Identities=20% Similarity=0.243 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCc-ccHHH----HHhcCCceE-e--CCCCCCCchHHHHHHHhhCC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNP-WKKEK----GEAFGMTDF-I--NPDDEPNKSISELVKGITHG 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~-~~~~~----~~~~g~~~v-~--~~~~~~~~~~~~~i~~~~~~ 139 (254)
++.++||+|+ +++|...++.+...|+ +|++.++.. ++.+. ++..|.... + |..+ .+.....+.+....
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d--~~~~~~~~~~~~~~ 87 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ--RATADELVATAVGL 87 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHh
Confidence 4678999987 8999999988888899 888887643 22222 233343221 1 2222 12222222222112
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|++|++.|.
T Consensus 88 g~iD~li~nAG~ 99 (306)
T PRK07792 88 GGLDIVVNNAGI 99 (306)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 448
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.91 E-value=0.071 Score=43.61 Aligned_cols=105 Identities=10% Similarity=0.061 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHH-HcCCCeEEEEcCCcccHHHH-HhcCCc--eEeCCCCCCCchHHHHHHHhhCCCCcc
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGAR-MQGAAKIIGIDKNPWKKEKG-EAFGMT--DFINPDDEPNKSISELVKGITHGMGVD 143 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~-~~g~~~v~~v~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~~~~~i~~~~~~~~~d 143 (254)
....+++|+|+|..|.+.++.+. ..+.++|.+.++++++.+.+ .++... .+. . .+..+.+ .+.|
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av------~~aD 190 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIP------EAVD 190 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHh------hcCC
Confidence 45678999999999999888876 46777899999998776643 334311 111 1 2233333 2899
Q ss_pred EEEEcCCChhHHHHHHHHcccCCcEEEEEccCCCceeeccHHHH
Q 025336 144 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDTMVPLNVIAL 187 (254)
Q Consensus 144 ~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~ 187 (254)
+|+.|+.+...+-..+ ++++ -.+..+|........++..-+
T Consensus 191 iVitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~p~~~El~~~~~ 231 (304)
T PRK07340 191 LVVTATTSRTPVYPEA--ARAG-RLVVAVGAFTPDMAELAPRTV 231 (304)
T ss_pred EEEEccCCCCceeCcc--CCCC-CEEEecCCCCCCcccCCHHHH
Confidence 9999887653322332 6787 788888876554445554433
No 449
>PRK06849 hypothetical protein; Provisional
Probab=95.90 E-value=0.12 Score=43.87 Aligned_cols=95 Identities=14% Similarity=0.035 Sum_probs=60.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc--eEeCCCCCCCchHHHHHHHhhCCCCccEE
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT--DFINPDDEPNKSISELVKGITHGMGVDYC 145 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~i~~~~~~~~~d~v 145 (254)
...+|||+|+ .+.|+..++.++..|. +|++++.++....... ..++ ..+.....+++.+.+.+.++....++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s-~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFS-RAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHH-HhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 3578999998 5789999999999999 9999988765443211 1122 22322221235567777776666689999
Q ss_pred EEcCCChhHHHHHHHHcccC
Q 025336 146 FECTGVPSLLSEALETTKVG 165 (254)
Q Consensus 146 ~d~~g~~~~~~~~~~~l~~~ 165 (254)
+-+......+......+.+.
T Consensus 81 IP~~e~~~~~a~~~~~l~~~ 100 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAY 100 (389)
T ss_pred EECChHHHhHHhhhhhhcCC
Confidence 98776432233333445554
No 450
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.90 E-value=0.047 Score=43.80 Aligned_cols=80 Identities=18% Similarity=0.155 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCc------eEeCCCCCCCchHHHHHHHhh
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMT------DFINPDDEPNKSISELVKGIT 137 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~------~v~~~~~~~~~~~~~~i~~~~ 137 (254)
.|..+||+|+ .++|.+.+..+...|+ +|+.+++++++.+..+. .+.. .+.|..+ .++..+.+....
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK--EVDVEKLVEFAV 83 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC--HHHHHHHHHHHH
Confidence 5788899986 8999999999999999 99999999887665432 2221 2234332 122222222221
Q ss_pred C--CCCccEEEEcCCC
Q 025336 138 H--GMGVDYCFECTGV 151 (254)
Q Consensus 138 ~--~~~~d~v~d~~g~ 151 (254)
. ..++|+.+++.|.
T Consensus 84 ~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGA 99 (270)
T ss_pred HHhCCCCCEEEEcCCc
Confidence 1 2379999998874
No 451
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.05 Score=43.26 Aligned_cols=80 Identities=20% Similarity=0.265 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh---cCCce---EeCCCCCCCchHHHHHHHhhC-CC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA---FGMTD---FINPDDEPNKSISELVKGITH-GM 140 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~i~~~~~-~~ 140 (254)
++.+++|+|+ |.+|...++.+...|+ +|+.++++++..+.+++ .+... ..|..+ ..+....+.++.. ..
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 4678999986 9999999998888999 89999887653333322 23221 123332 1222222222211 23
Q ss_pred CccEEEEcCCC
Q 025336 141 GVDYCFECTGV 151 (254)
Q Consensus 141 ~~d~v~d~~g~ 151 (254)
++|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (263)
T PRK08226 82 RIDILVNNAGV 92 (263)
T ss_pred CCCEEEECCCc
Confidence 78999998873
No 452
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=95.89 E-value=0.25 Score=40.36 Aligned_cols=43 Identities=19% Similarity=0.294 Sum_probs=36.8
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM 115 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~ 115 (254)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+++.|.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~ 44 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT 44 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence 58889999999988888888898 89999999998888877653
No 453
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.082 Score=41.47 Aligned_cols=76 Identities=11% Similarity=0.128 Sum_probs=48.5
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----c-CCc-eEe--CCCCCCCchHHHHHHHhhCCCC
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----F-GMT-DFI--NPDDEPNKSISELVKGITHGMG 141 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~-g~~-~v~--~~~~~~~~~~~~~i~~~~~~~~ 141 (254)
.+++|+|+ |++|...++.+...|+ +|+++++++++.+...+ . +.. .++ |..+ ..+....+.+... .
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~--~ 76 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD--TASHAAFLDSLPA--L 76 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC--hHHHHHHHHHHhh--c
Confidence 47899986 9999999999888999 89999998876544321 1 111 122 3332 2333333333322 5
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|+++.+.|.
T Consensus 77 ~d~vv~~ag~ 86 (243)
T PRK07102 77 PDIVLIAVGT 86 (243)
T ss_pred CCEEEECCcC
Confidence 7999987764
No 454
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.89 E-value=0.041 Score=44.19 Aligned_cols=46 Identities=17% Similarity=0.104 Sum_probs=38.5
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH
Q 025336 66 EVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE 111 (254)
Q Consensus 66 ~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~ 111 (254)
+...+.+++|+|+|+.+++++..++..|+.+++++.++.++.+.+.
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la 163 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALA 163 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 3445568999999999999999999999978999999988777654
No 455
>PLN02928 oxidoreductase family protein
Probab=95.87 E-value=0.14 Score=42.75 Aligned_cols=98 Identities=20% Similarity=0.322 Sum_probs=58.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcC----C-ceEeCCCCCCCchHHHHHHHhhCCCCcc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFG----M-TDFINPDDEPNKSISELVKGITHGMGVD 143 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g----~-~~v~~~~~~~~~~~~~~i~~~~~~~~~d 143 (254)
.|.++.|+|.|.+|+.+++.++.+|+ +|++.+++..+... ..++ . ....+... ...++.+.+. ..|
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~L~ell~------~aD 228 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKG-GHEDIYEFAG------EAD 228 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccC-cccCHHHHHh------hCC
Confidence 57899999999999999999999999 99999876332111 1110 0 00000000 0022222221 568
Q ss_pred EEEEcCCChhH-----HHHHHHHcccCCcEEEEEccCC
Q 025336 144 YCFECTGVPSL-----LSEALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 144 ~v~d~~g~~~~-----~~~~~~~l~~~~G~~v~~g~~~ 176 (254)
+|+.+...... -...+..++++ ..+|-++...
T Consensus 229 iVvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaRG~ 265 (347)
T PLN02928 229 IVVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIARGG 265 (347)
T ss_pred EEEECCCCChHhhcccCHHHHhcCCCC-eEEEECCCcc
Confidence 88877653221 13566778887 7777777653
No 456
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.87 E-value=0.052 Score=43.27 Aligned_cols=80 Identities=21% Similarity=0.298 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce---EeCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD---FINPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~---v~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
++.+++|+|+ +++|...+..+...|+ +|+.+++++++.+.+ ++.+... ..|..+ .......+.+... -
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 4678999987 8999998888888899 888888887665443 2334322 123333 1223333332221 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|.++.+.|.
T Consensus 86 ~~id~li~~ag~ 97 (265)
T PRK07097 86 GVIDILVNNAGI 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 269999998874
No 457
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=95.87 E-value=0.046 Score=44.81 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=60.9
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHH---HHhc-CC---ceEeCCCCCCCchHHHHH
Q 025336 61 AWKEAEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEK---GEAF-GM---TDFINPDDEPNKSISELV 133 (254)
Q Consensus 61 l~~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~---~~~~-g~---~~v~~~~~~~~~~~~~~i 133 (254)
+.......++++||-+|+|. |..+..+++. |+..|++++.++.-... ++.+ +. ..+.. .+ +
T Consensus 113 ~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~------~~----i 180 (314)
T TIGR00452 113 VLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP------LG----I 180 (314)
T ss_pred HHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE------CC----H
Confidence 33455667789999999875 7766666654 66579999988754432 2222 21 11221 11 1
Q ss_pred HHhhCCCCccEEEEcC-----CC-hhHHHHHHHHcccCCcEEEEE
Q 025336 134 KGITHGMGVDYCFECT-----GV-PSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 134 ~~~~~~~~~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~ 172 (254)
.++.....||+|+-.. .. ...+..+.+.|+++ |++++-
T Consensus 181 e~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle 224 (314)
T TIGR00452 181 EQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE 224 (314)
T ss_pred HHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence 2222223799998532 12 24678888999999 999864
No 458
>PRK06484 short chain dehydrogenase; Validated
Probab=95.86 E-value=0.04 Score=48.57 Aligned_cols=80 Identities=20% Similarity=0.285 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH-HhcCCce---EeCCCCCCCchHHHHHHHhhC-CCCc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG-EAFGMTD---FINPDDEPNKSISELVKGITH-GMGV 142 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~-~~~g~~~---v~~~~~~~~~~~~~~i~~~~~-~~~~ 142 (254)
++.++||+|+ +++|...++.+...|+ +|+.++++.++.+.+ ++++... ..|..+ +++....+.++.. ..++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 5678999986 8999999999999999 999998888776654 3455322 234433 2333333333321 1279
Q ss_pred cEEEEcCCC
Q 025336 143 DYCFECTGV 151 (254)
Q Consensus 143 d~v~d~~g~ 151 (254)
|+++++.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999998874
No 459
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=95.86 E-value=0.057 Score=39.51 Aligned_cols=85 Identities=14% Similarity=0.083 Sum_probs=54.5
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC------ceEeCCCCCCCchHHHHHHHhhCCCCccEE
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM------TDFINPDDEPNKSISELVKGITHGMGVDYC 145 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v 145 (254)
+|.|+|+|+.|.+++..+...|. +|....++++..+.++..+. +..+..+-.-..++.+.+ .+.|++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~------~~ad~I 73 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL------EDADII 73 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH------TT-SEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh------CcccEE
Confidence 58899999999999999999998 99999999887777765221 111111000012333333 278999
Q ss_pred EEcCCChhHHHHHHHHccc
Q 025336 146 FECTGVPSLLSEALETTKV 164 (254)
Q Consensus 146 ~d~~g~~~~~~~~~~~l~~ 164 (254)
+-++... ..+..++.+++
T Consensus 74 iiavPs~-~~~~~~~~l~~ 91 (157)
T PF01210_consen 74 IIAVPSQ-AHREVLEQLAP 91 (157)
T ss_dssp EE-S-GG-GHHHHHHHHTT
T ss_pred EecccHH-HHHHHHHHHhh
Confidence 9988876 45666666555
No 460
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.86 E-value=0.064 Score=42.74 Aligned_cols=80 Identities=16% Similarity=0.243 Sum_probs=48.5
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCC---cccHHHH-HhcCCceE--eCCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGL---GTVGLGAVDGARMQGAAKIIGIDKN---PWKKEKG-EAFGMTDF--INPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~---g~~G~~~~~~a~~~g~~~v~~v~~~---~~~~~~~-~~~g~~~v--~~~~~~~~~~~~~~i~~~~~- 138 (254)
++.++||+|+ +++|.+.++.+...|+ +|+.+.+. +++.+.+ ++++.... .|-.+ .++....+.+...
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 81 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS--DEQIDALFASLGQH 81 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC--HHHHHHHHHHHHHH
Confidence 4678999983 5899999988888999 88877543 2333322 23443222 23332 2344444444322
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
..++|+++++.|.
T Consensus 82 ~g~iD~lvnnAG~ 94 (260)
T PRK06997 82 WDGLDGLVHSIGF 94 (260)
T ss_pred hCCCcEEEEcccc
Confidence 1379999998863
No 461
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=95.86 E-value=0.043 Score=43.60 Aligned_cols=74 Identities=12% Similarity=0.041 Sum_probs=52.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCCC
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 151 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~ 151 (254)
+|||+|+++-|..+++.+...|. +|++..+++.+.+.+...|...++...- +..+ +.++....++|+|+|++..
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~l-~~~~----l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGAL-DPQE----LREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECCC-CHHH----HHHHHHhcCCCEEEEcCCH
Confidence 68999885559998888888898 8999989988887777776555442221 1122 3333333489999999875
No 462
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=95.85 E-value=0.057 Score=42.27 Aligned_cols=33 Identities=24% Similarity=0.406 Sum_probs=29.7
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
+|||.|+|++|...+..+...|.+++..+|.+.
T Consensus 1 kVlvvG~GGlG~eilk~La~~Gvg~i~ivD~D~ 33 (234)
T cd01484 1 KVLLVGAGGIGCELLKNLALMGFGQIHVIDMDT 33 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999999999988764
No 463
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.84 E-value=0.082 Score=41.22 Aligned_cols=74 Identities=18% Similarity=0.235 Sum_probs=53.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh--cCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcC
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA--FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 149 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~--~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~ 149 (254)
.++|.|+|.+|...++.+...|. .|++++.++++.+...+ +... ++..+ ..-.+.+++. +-..+|.++=++
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd----~t~~~~L~~a-gi~~aD~vva~t 74 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGD----ATDEDVLEEA-GIDDADAVVAAT 74 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEec----CCCHHHHHhc-CCCcCCEEEEee
Confidence 57889999999999999999999 99999999998877333 4443 33222 1122334443 445899999888
Q ss_pred CCh
Q 025336 150 GVP 152 (254)
Q Consensus 150 g~~ 152 (254)
+..
T Consensus 75 ~~d 77 (225)
T COG0569 75 GND 77 (225)
T ss_pred CCC
Confidence 874
No 464
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.84 E-value=0.16 Score=41.17 Aligned_cols=94 Identities=16% Similarity=0.209 Sum_probs=64.4
Q ss_pred cccchhhhhhHHHHHhcCCCCCCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEc-CCcccHHHHHhcCCceEeCCCCCCC
Q 025336 49 FLSCGFTTGFGAAWKEAEVEKGSSVAVLG-LGTVGLGAVDGARMQGAAKIIGID-KNPWKKEKGEAFGMTDFINPDDEPN 126 (254)
Q Consensus 49 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G-~g~~G~~~~~~a~~~g~~~v~~v~-~~~~~~~~~~~~g~~~v~~~~~~~~ 126 (254)
.+||+....+..|....---.|.+|+|+| ++.+|.-++.++...|+ .|++.. +++
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~---------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR---------------------- 193 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC----------------------
Confidence 45666555555553332234799999999 69999999999999999 787762 221
Q ss_pred chHHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccC
Q 025336 127 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 127 ~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 175 (254)
++. +.. +..|+++-++|.+..+...+ ++++ ..++.+|..
T Consensus 194 -~l~----e~~--~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 194 -DLP----AVC--RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred -CHH----HHH--hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 111 111 16799999999886555544 7887 888888864
No 465
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.84 E-value=0.22 Score=40.75 Aligned_cols=43 Identities=26% Similarity=0.407 Sum_probs=36.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM 115 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~ 115 (254)
+|.++|.|.+|...++-+...|. +|++.++++++.+.+.+.|+
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~ 44 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGA 44 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCC
Confidence 58889999999988888888898 89999999988887766664
No 466
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.84 E-value=0.079 Score=45.12 Aligned_cols=74 Identities=24% Similarity=0.303 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcC--Cce-EeCCCCCCCchHHHHHHHhhCCCCcc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFG--MTD-FINPDDEPNKSISELVKGITHGMGVD 143 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g--~~~-v~~~~~~~~~~~~~~i~~~~~~~~~d 143 (254)
++.+++|+|+ |++|.+.++.+...|+ +|+++++++++.+... ..+ ... ..|..+ .+ .+.+.. .++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd---~~---~v~~~l--~~ID 247 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ---EA---ALAELL--EKVD 247 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC---HH---HHHHHh--CCCC
Confidence 4679999987 9999999998888999 8998888766543321 111 111 123332 22 222222 2799
Q ss_pred EEEEcCCC
Q 025336 144 YCFECTGV 151 (254)
Q Consensus 144 ~v~d~~g~ 151 (254)
+++++.|.
T Consensus 248 iLInnAGi 255 (406)
T PRK07424 248 ILIINHGI 255 (406)
T ss_pred EEEECCCc
Confidence 99988764
No 467
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.82 E-value=0.087 Score=41.23 Aligned_cols=80 Identities=21% Similarity=0.228 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccc-HHH----HHhcCCce-Ee--CCCCCCCchHHHHHHHhhC-
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWK-KEK----GEAFGMTD-FI--NPDDEPNKSISELVKGITH- 138 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~-~~~----~~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~- 138 (254)
++.++||+|+ |.+|...+..+...|+ +|+++.++.++ .+. ++..+... .+ |..+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3568999987 9999999999998999 77666665442 221 22233222 22 3333 2333333333322
Q ss_pred CCCccEEEEcCCC
Q 025336 139 GMGVDYCFECTGV 151 (254)
Q Consensus 139 ~~~~d~v~d~~g~ 151 (254)
..++|.++.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 1378999998874
No 468
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=95.82 E-value=0.22 Score=42.70 Aligned_cols=74 Identities=20% Similarity=0.311 Sum_probs=51.6
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhh---------CCCC
Q 025336 71 SSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGIT---------HGMG 141 (254)
Q Consensus 71 ~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~---------~~~~ 141 (254)
.+|.|+|.|-+|..++..+...|. +|+++++++++.+.++. |.. ...+ +.+.+.+++.. .-..
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~---~~~e---~~l~~~l~~~~~~g~l~~~~~~~~ 75 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEI---HIVE---PDLDMVVKTAVEGGYLRATTTPEP 75 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCC---CcCC---CCHHHHHHHHhhcCceeeeccccc
Confidence 468999999999999888888899 99999999998887653 321 1122 33333333211 1126
Q ss_pred ccEEEEcCCCh
Q 025336 142 VDYCFECTGVP 152 (254)
Q Consensus 142 ~d~v~d~~g~~ 152 (254)
.|++|-|++.+
T Consensus 76 aDvvii~vptp 86 (415)
T PRK11064 76 ADAFLIAVPTP 86 (415)
T ss_pred CCEEEEEcCCC
Confidence 89999999874
No 469
>PRK06436 glycerate dehydrogenase; Provisional
Probab=95.80 E-value=0.11 Score=42.37 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP 104 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~ 104 (254)
.|.+|.|+|.|.+|+..++.++.+|+ +|++.+++.
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~ 155 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSY 155 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCC
Confidence 57899999999999999999999999 999998763
No 470
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.79 E-value=0.07 Score=42.23 Aligned_cols=100 Identities=15% Similarity=0.096 Sum_probs=59.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcC--CceE-eCCCCCCCchHHHHHHHhhCCCCccE
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFG--MTDF-INPDDEPNKSISELVKGITHGMGVDY 144 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g--~~~v-~~~~~~~~~~~~~~i~~~~~~~~~d~ 144 (254)
.+.+|||+|+ |.+|..+++.+...|+ +|+++.+++++.......+ ...+ .|..+ . ...+.+... .++|+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~--~~~l~~~~~-~~~d~ 88 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G--SDKLVEAIG-DDSDA 88 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C--HHHHHHHhh-cCCCE
Confidence 4578999997 9999999988888899 8998888876654332211 2211 23322 1 112222221 27999
Q ss_pred EEEcCCChh-------------HHHHHHHHcccC-CcEEEEEccC
Q 025336 145 CFECTGVPS-------------LLSEALETTKVG-KGKVIVIGVG 175 (254)
Q Consensus 145 v~d~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 175 (254)
+|.+.|... ....+++.+... .++++.+++.
T Consensus 89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 998876421 123444444432 1578877654
No 471
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=95.78 E-value=0.1 Score=42.05 Aligned_cols=96 Identities=4% Similarity=0.014 Sum_probs=58.2
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCce-EeCCCCCCCchHHHHHHHhhCCCC-ccEEEEc
Q 025336 72 SVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTD-FINPDDEPNKSISELVKGITHGMG-VDYCFEC 148 (254)
Q Consensus 72 ~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~~~~-~d~v~d~ 148 (254)
+|||+|+ |.+|..+++.+...|. +|.+.++++++.. ..+... ..|..+ ++.+...++....-.+ +|.++.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~-~V~~~~R~~~~~~---~~~~~~~~~d~~d--~~~l~~a~~~~~~~~g~~d~v~~~ 74 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV-PFLVASRSSSSSA---GPNEKHVKFDWLD--EDTWDNPFSSDDGMEPEISAVYLV 74 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC-cEEEEeCCCcccc---CCCCccccccCCC--HHHHHHHHhcccCcCCceeEEEEe
Confidence 4899987 9999999999998999 8999989876542 123222 235544 2333333322212135 8999877
Q ss_pred CCCh----hHHHHHHHHcccCCc--EEEEEcc
Q 025336 149 TGVP----SLLSEALETTKVGKG--KVIVIGV 174 (254)
Q Consensus 149 ~g~~----~~~~~~~~~l~~~~G--~~v~~g~ 174 (254)
.+.. ......++.+... | ++|.++.
T Consensus 75 ~~~~~~~~~~~~~~i~aa~~~-gv~~~V~~Ss 105 (285)
T TIGR03649 75 APPIPDLAPPMIKFIDFARSK-GVRRFVLLSA 105 (285)
T ss_pred CCCCCChhHHHHHHHHHHHHc-CCCEEEEeec
Confidence 6631 1233444554444 4 6776654
No 472
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.75 E-value=0.073 Score=46.08 Aligned_cols=70 Identities=29% Similarity=0.343 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc-ccH----HHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCcc
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP-WKK----EKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVD 143 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~-~~~----~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d 143 (254)
.+.+|+|+|+|.+|+.+++.+...|+ +|++++.+. +.. +.+.+.|..... ... .+ . . . .++|
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~---~~---~---~-~-~~~d 70 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIELVL-GEY---PE---E---F-L-EGVD 70 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCc---ch---h---H-h-hcCC
Confidence 46789999998899999999999999 899998864 222 333445654222 221 11 1 1 1 2789
Q ss_pred EEEEcCCC
Q 025336 144 YCFECTGV 151 (254)
Q Consensus 144 ~v~d~~g~ 151 (254)
+|+.+.|.
T Consensus 71 ~vv~~~g~ 78 (450)
T PRK14106 71 LVVVSPGV 78 (450)
T ss_pred EEEECCCC
Confidence 99998885
No 473
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=95.74 E-value=0.27 Score=37.89 Aligned_cols=98 Identities=18% Similarity=0.197 Sum_probs=59.1
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEE
Q 025336 67 VEKGSSVAVLGLGTVGLGAVDGARMQGA-AKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 145 (254)
Q Consensus 67 ~~~~~~vlI~G~g~~G~~~~~~a~~~g~-~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v 145 (254)
++++++||=+|+|+ |..+..+++..+. .+|++++.++.. ......++..+- ......+.+.+......+|+|
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~-----~~~~v~~i~~D~-~~~~~~~~i~~~~~~~~~D~V 121 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD-----PIVGVDFLQGDF-RDELVLKALLERVGDSKVQVV 121 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc-----CCCCcEEEecCC-CChHHHHHHHHHhCCCCCCEE
Confidence 57888998888765 6666667776653 389999987621 111112232211 113334445443344589999
Q ss_pred EEcC-----CC------------hhHHHHHHHHcccCCcEEEEE
Q 025336 146 FECT-----GV------------PSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 146 ~d~~-----g~------------~~~~~~~~~~l~~~~G~~v~~ 172 (254)
+-.. +. ...++.+.+.|+++ |+++..
T Consensus 122 ~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~ 164 (209)
T PRK11188 122 MSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVK 164 (209)
T ss_pred ecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 9532 22 12467788899999 998874
No 474
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.071 Score=42.63 Aligned_cols=77 Identities=18% Similarity=0.193 Sum_probs=48.4
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce-Ee--CCCCCCCchHHHHHHHhhC-CCCc
Q 025336 72 SVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD-FI--NPDDEPNKSISELVKGITH-GMGV 142 (254)
Q Consensus 72 ~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~-~~~~ 142 (254)
++||+|+ |++|...++.+...|. +|+.++++.++.+.+ +..+.+. ++ |..+ ..++...+.++.. ..++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD--YSQLTALAQACEEKWGGI 78 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 6899987 9999999988888899 899998887665533 2233222 22 3222 1222333322221 1379
Q ss_pred cEEEEcCCC
Q 025336 143 DYCFECTGV 151 (254)
Q Consensus 143 d~v~d~~g~ 151 (254)
|++|.+.|.
T Consensus 79 d~lI~~ag~ 87 (270)
T PRK05650 79 DVIVNNAGV 87 (270)
T ss_pred CEEEECCCC
Confidence 999999874
No 475
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.067 Score=42.42 Aligned_cols=76 Identities=16% Similarity=0.189 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCc-eEeCCCCCCCchHHHHHHHhh-CCCCccEE
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMT-DFINPDDEPNKSISELVKGIT-HGMGVDYC 145 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~-~~~~~d~v 145 (254)
++.++||+|+ |++|...++.+...|+ +|+++++++++.. .-... ...|..+ .+.....+.++. ...++|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT--AEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4788999986 8999999998888999 8999988754321 10111 1123333 122222222221 12379999
Q ss_pred EEcCC
Q 025336 146 FECTG 150 (254)
Q Consensus 146 ~d~~g 150 (254)
+++.|
T Consensus 82 i~~ag 86 (260)
T PRK06523 82 VHVLG 86 (260)
T ss_pred EECCc
Confidence 99887
No 476
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.74 E-value=0.057 Score=42.83 Aligned_cols=79 Identities=22% Similarity=0.209 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCc-eE--eCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMT-DF--INPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~-~v--~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
.+.++||+|+ |++|...++.+...|+ +|+++.++ ++.+.+ .+.+.. .+ .|..+ .+.....+.+... .
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEEF 89 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4689999987 9999999999999999 88888777 333332 223322 12 23333 1223333333221 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++.+.|.
T Consensus 90 g~id~li~~ag~ 101 (258)
T PRK06935 90 GKIDILVNNAGT 101 (258)
T ss_pred CCCCEEEECCCC
Confidence 278999998874
No 477
>PRK03612 spermidine synthase; Provisional
Probab=95.73 E-value=0.082 Score=46.66 Aligned_cols=102 Identities=15% Similarity=0.147 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcC-Cc----eEeCCCCC--CCchHHHHHHHhhCCC
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFG-MT----DFINPDDE--PNKSISELVKGITHGM 140 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g-~~----~v~~~~~~--~~~~~~~~i~~~~~~~ 140 (254)
++.++||++|+|. |..+..++++....+|++++.+++-.+.+++.. .. ..++.... -..|..+.+++. . .
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~-~-~ 372 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKL-A-E 372 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhC-C-C
Confidence 4567899998763 666677777655359999999999998888721 00 01110000 013344444432 2 3
Q ss_pred CccEEEEcCCCh-----------hHHHHHHHHcccCCcEEEEEc
Q 025336 141 GVDYCFECTGVP-----------SLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 141 ~~d~v~d~~g~~-----------~~~~~~~~~l~~~~G~~v~~g 173 (254)
.||+|+-....+ +.++.+.+.++++ |.++.-.
T Consensus 373 ~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~ 415 (521)
T PRK03612 373 KFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS 415 (521)
T ss_pred CCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence 899998432211 2456888899999 9988654
No 478
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.73 E-value=0.069 Score=48.05 Aligned_cols=93 Identities=10% Similarity=0.085 Sum_probs=66.3
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEe-CCCCCCCchHHHHHHHhhCCCCccEEEEcC
Q 025336 71 SSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT 149 (254)
Q Consensus 71 ~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~ 149 (254)
++|+|.|.|.+|+..++.++..|. +++++|.++++.+.+++.|...++ |..+ ++ .+++ .+-...|.++-+.
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat~---~~---~L~~-agi~~A~~vv~~~ 472 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGDATQ---LE---LLRA-AGAEKAEAIVITC 472 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEeeCCC---HH---HHHh-cCCccCCEEEEEe
Confidence 579999999999999999999999 899999999999999998865443 2222 22 2322 3444899999999
Q ss_pred CChhHHH---HHHHHcccCCcEEEEE
Q 025336 150 GVPSLLS---EALETTKVGKGKVIVI 172 (254)
Q Consensus 150 g~~~~~~---~~~~~l~~~~G~~v~~ 172 (254)
++...-. ...+...|. .+++.-
T Consensus 473 ~d~~~n~~i~~~~r~~~p~-~~IiaR 497 (601)
T PRK03659 473 NEPEDTMKIVELCQQHFPH-LHILAR 497 (601)
T ss_pred CCHHHHHHHHHHHHHHCCC-CeEEEE
Confidence 8753322 233445565 565543
No 479
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.73 E-value=0.086 Score=45.60 Aligned_cols=71 Identities=20% Similarity=0.276 Sum_probs=47.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCccc----HHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWK----KEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDY 144 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~----~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~ 144 (254)
.+.+++|+|.|.+|+++++++...|+ +|++.+.+... .+.+++.|......... .+. + . .++|+
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~---~~~---~----~-~~~d~ 71 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHP---LEL---L----D-EDFDL 71 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCC---HHH---h----c-CcCCE
Confidence 36789999998899999999999999 89998865422 23345556543322221 111 1 1 15889
Q ss_pred EEEcCCC
Q 025336 145 CFECTGV 151 (254)
Q Consensus 145 v~d~~g~ 151 (254)
++.+.|-
T Consensus 72 vV~s~gi 78 (447)
T PRK02472 72 MVKNPGI 78 (447)
T ss_pred EEECCCC
Confidence 9887764
No 480
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.72 E-value=0.16 Score=41.44 Aligned_cols=43 Identities=23% Similarity=0.487 Sum_probs=36.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM 115 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~ 115 (254)
+|.++|.|.+|...+.-+...|. +|++.++++++.+.+++.|+
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~ 44 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGI 44 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCC
Confidence 47888999999988888888898 89999999888887776664
No 481
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=95.72 E-value=0.21 Score=41.96 Aligned_cols=61 Identities=26% Similarity=0.290 Sum_probs=44.4
Q ss_pred CCccccccccchhhhhhHHHHHhcCC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcc
Q 025336 42 IDLSHASFLSCGFTTGFGAAWKEAEV-EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPW 105 (254)
Q Consensus 42 ~~~~~aa~~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~ 105 (254)
...++|....+.+++- .++ ...+. -+|.+|.|.|.|.+|+.+++.+...|+ +|++++.+..
T Consensus 180 ~~r~~aTg~Gv~~~~~-~a~-~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 180 LGRSEATGYGVFYAIR-EAL-KALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred CCCCcccceehHHHHH-HHH-HHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 3345555555554444 343 34443 489999999999999999999998899 8988877655
No 482
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=95.70 E-value=0.049 Score=38.26 Aligned_cols=79 Identities=19% Similarity=0.361 Sum_probs=47.8
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc-CCcccHHHHHh-cCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEE
Q 025336 70 GSSVAVLGLGTVGLGAVDGARMQGAAKIIGID-KNPWKKEKGEA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 147 (254)
Q Consensus 70 ~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~-~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d 147 (254)
.-+|-|+|+|.+|..+...++..|. .|..+. ++.+..+.+.. ++...+.+..+ .. ...|++|-
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------------~~--~~aDlv~i 74 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE------------IL--RDADLVFI 74 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG------------GG--CC-SEEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc------------cc--ccCCEEEE
Confidence 3578899999999999999999999 887774 44555555544 34333332221 11 27899999
Q ss_pred cCCChhHHHHHHHHccc
Q 025336 148 CTGVPSLLSEALETTKV 164 (254)
Q Consensus 148 ~~g~~~~~~~~~~~l~~ 164 (254)
++.+. .+......+..
T Consensus 75 avpDd-aI~~va~~La~ 90 (127)
T PF10727_consen 75 AVPDD-AIAEVAEQLAQ 90 (127)
T ss_dssp -S-CC-HHHHHHHHHHC
T ss_pred EechH-HHHHHHHHHHH
Confidence 99887 56666666543
No 483
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.70 E-value=0.087 Score=41.70 Aligned_cols=80 Identities=16% Similarity=0.113 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce---EeCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD---FINPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~---v~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
.+.++||+|+ +++|..+++.+...|+ +++.++++.++.+.+ +..+... ..|..+ .++..+.+.+... -
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4688999986 9999999998888999 888888876655443 2233221 234433 1223333333211 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++.+.|.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 378999998873
No 484
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.69 E-value=0.092 Score=41.55 Aligned_cols=80 Identities=14% Similarity=0.143 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCc-ccHHHHHhcCCce-EeCCCCCCCchHHHHHHHhhC-CCCccE
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNP-WKKEKGEAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDY 144 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~-~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~-~~~~d~ 144 (254)
.+.+++|+|+ |++|...++.+...|+ +|+.+.++. +..+.++..+... ..|..+ .++....+.+... ..++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 3678999986 9999999999888999 777764443 3333444333322 224333 2333333333221 127999
Q ss_pred EEEcCCC
Q 025336 145 CFECTGV 151 (254)
Q Consensus 145 v~d~~g~ 151 (254)
++.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 485
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.69 E-value=0.077 Score=41.56 Aligned_cols=80 Identities=23% Similarity=0.188 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcCCce-E--eCCCCCCCchHHHHHHHhh-CCCCc
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFGMTD-F--INPDDEPNKSISELVKGIT-HGMGV 142 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g~~~-v--~~~~~~~~~~~~~~i~~~~-~~~~~ 142 (254)
++.++||+|+ |.+|..+++.+...|+ .|+...++.++.+.+. ..+... + .|..+ .+.+...+.+.. ...++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD--RDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 3678999986 9999999988888999 8888877766665442 333221 2 23332 122222222221 12379
Q ss_pred cEEEEcCCC
Q 025336 143 DYCFECTGV 151 (254)
Q Consensus 143 d~v~d~~g~ 151 (254)
|.++.+.|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12936 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999999874
No 486
>PRK12743 oxidoreductase; Provisional
Probab=95.69 E-value=0.083 Score=41.87 Aligned_cols=79 Identities=11% Similarity=0.035 Sum_probs=47.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-CcccHHH----HHhcCCce-E--eCCCCCCCchHHHHHHHhhC-C
Q 025336 70 GSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDK-NPWKKEK----GEAFGMTD-F--INPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 70 ~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~-~~~~~~~----~~~~g~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
+.++||+|+ |++|..+++.+...|+ +|+.+.+ +.++.+. ++..+... . .|..+ .+.....+.++.. .
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 468999987 8999999999999999 7877644 4333322 23345322 2 23333 2223233333221 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|+++.+.|.
T Consensus 79 ~~id~li~~ag~ 90 (256)
T PRK12743 79 GRIDVLVNNAGA 90 (256)
T ss_pred CCCCEEEECCCC
Confidence 278999998874
No 487
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=95.67 E-value=0.051 Score=37.33 Aligned_cols=96 Identities=22% Similarity=0.258 Sum_probs=57.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCceEeCCCCCCCchHHHHHHHhhCCCCccEE
Q 025336 70 GSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTDFINPDDEPNKSISELVKGITHGMGVDYC 145 (254)
Q Consensus 70 ~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v 145 (254)
|.+||-.|+|. |...+.+++.... ++++++.+++..+.++. .+.+.-++... .++.+....... ..+|+|
T Consensus 1 g~~vlD~~~G~-G~~~~~~~~~~~~-~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~---~D~~~~~~~~~~-~~~D~I 74 (117)
T PF13659_consen 1 GDRVLDPGCGS-GTFLLAALRRGAA-RVTGVDIDPEAVELARRNLPRNGLDDRVEVIV---GDARDLPEPLPD-GKFDLI 74 (117)
T ss_dssp TEEEEEETSTT-CHHHHHHHHHCTC-EEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE---SHHHHHHHTCTT-T-EEEE
T ss_pred CCEEEEcCcch-HHHHHHHHHHCCC-eEEEEEECHHHHHHHHHHHHHccCCceEEEEE---CchhhchhhccC-ceeEEE
Confidence 45778776543 4555555555434 99999999998888765 23210011111 445444433333 489999
Q ss_pred EEcCC-C-------------hhHHHHHHHHcccCCcEEEEE
Q 025336 146 FECTG-V-------------PSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 146 ~d~~g-~-------------~~~~~~~~~~l~~~~G~~v~~ 172 (254)
+-... . ...++.+.+.++++ |.++.+
T Consensus 75 v~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 75 VTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp EE--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 85332 1 12377889999999 988765
No 488
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=95.67 E-value=0.053 Score=34.61 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=29.1
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcc
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPW 105 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~ 105 (254)
+|+|+|+|.+|.-++..++.+|. +|..+.+++.
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~g~-~vtli~~~~~ 33 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAELGK-EVTLIERSDR 33 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTS-EEEEEESSSS
T ss_pred CEEEECcCHHHHHHHHHHHHhCc-EEEEEeccch
Confidence 58899999999999999999999 8999877643
No 489
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=95.66 E-value=0.2 Score=40.85 Aligned_cols=43 Identities=26% Similarity=0.336 Sum_probs=36.9
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCC
Q 025336 72 SVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGM 115 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~ 115 (254)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 3 ~Ig~IGlG~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~g~ 45 (296)
T PRK15461 3 AIAFIGLGQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDKGA 45 (296)
T ss_pred eEEEEeeCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHcCC
Confidence 68899999999998888888898 89999999988887766554
No 490
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.63 E-value=0.071 Score=37.10 Aligned_cols=91 Identities=21% Similarity=0.134 Sum_probs=50.5
Q ss_pred EEEEEcC-CHHHHHHHHHHHH-cCCCeEEEEcCCc-ccHHHHHhcC----C-ceEeCCCCCCCchHHHHHHHhhCCCCcc
Q 025336 72 SVAVLGL-GTVGLGAVDGARM-QGAAKIIGIDKNP-WKKEKGEAFG----M-TDFINPDDEPNKSISELVKGITHGMGVD 143 (254)
Q Consensus 72 ~vlI~G~-g~~G~~~~~~a~~-~g~~~v~~v~~~~-~~~~~~~~~g----~-~~v~~~~~~~~~~~~~~i~~~~~~~~~d 143 (254)
+|.|+|+ |.+|..+++++.. -.+..+.++.++. ....+...++ . +..+...+ ...+ ..+|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~---~~~D 68 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDAD---------PEEL---SDVD 68 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETS---------GHHH---TTES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecc---------hhHh---hcCC
Confidence 5889996 9999999988875 4452334444444 2222222222 1 22221111 1112 2899
Q ss_pred EEEEcCCChhHHHHHHHHcccCCcEEEEEccC
Q 025336 144 YCFECTGVPSLLSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 144 ~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 175 (254)
+||.|.+.....+..-..+..+ -+++..+..
T Consensus 69 vvf~a~~~~~~~~~~~~~~~~g-~~ViD~s~~ 99 (121)
T PF01118_consen 69 VVFLALPHGASKELAPKLLKAG-IKVIDLSGD 99 (121)
T ss_dssp EEEE-SCHHHHHHHHHHHHHTT-SEEEESSST
T ss_pred EEEecCchhHHHHHHHHHhhCC-cEEEeCCHH
Confidence 9999999875544444455665 577766543
No 491
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.60 E-value=0.11 Score=40.28 Aligned_cols=92 Identities=12% Similarity=0.002 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCc-ccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEE
Q 025336 69 KGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNP-WKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 147 (254)
Q Consensus 69 ~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d 147 (254)
++.+|||+|+|.++.-=++.+...|+ +|+++...- +.+..+...|.-..+. ++ +.+. .+ .++++||-
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~-----~~~~--dl---~g~~LVia 91 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GN-----YDKE--FI---KDKHLIVI 91 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CC-----CChH--Hh---CCCcEEEE
Confidence 57789999999999887888888999 888885543 1222222333322221 21 1110 11 28899999
Q ss_pred cCCChhHHHHHHHHcccCCcEEEEEc
Q 025336 148 CTGVPSLLSEALETTKVGKGKVIVIG 173 (254)
Q Consensus 148 ~~g~~~~~~~~~~~l~~~~G~~v~~g 173 (254)
|++.+..-..+....... +.++...
T Consensus 92 ATdD~~vN~~I~~~a~~~-~~lvn~v 116 (223)
T PRK05562 92 ATDDEKLNNKIRKHCDRL-YKLYIDC 116 (223)
T ss_pred CCCCHHHHHHHHHHHHHc-CCeEEEc
Confidence 999884434444445554 5555443
No 492
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.59 E-value=0.05 Score=40.02 Aligned_cols=45 Identities=22% Similarity=0.169 Sum_probs=37.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcC
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFG 114 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g 114 (254)
.|..|++.|+ -++|+..++-+...|+ +|+++.++++.+..+-+.-
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~ 51 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKET 51 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhC
Confidence 4778899998 4899999999999999 9999999998887765443
No 493
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=95.58 E-value=0.27 Score=42.32 Aligned_cols=103 Identities=18% Similarity=0.211 Sum_probs=65.1
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCCcccHHHHHh----cCCceE--eCCCCCCCchHHHHHHH
Q 025336 63 KEAEVEKGSSVAVLGLGTVGLGAVDGARMQG-AAKIIGIDKNPWKKEKGEA----FGMTDF--INPDDEPNKSISELVKG 135 (254)
Q Consensus 63 ~~~~~~~~~~vlI~G~g~~G~~~~~~a~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~v--~~~~~~~~~~~~~~i~~ 135 (254)
....+++|++||=.|+|+ |..+++++..++ ..+|+++|.++++++.+++ +|.+.+ +..+. .++ ..
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~l----~~ 302 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ERL----TE 302 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hhh----hh
Confidence 345778999999887765 556666777653 2389999999999988754 565432 21111 111 11
Q ss_pred hhCCCCccEEE-E--cCCCh-------------------------hHHHHHHHHcccCCcEEEEEccC
Q 025336 136 ITHGMGVDYCF-E--CTGVP-------------------------SLLSEALETTKVGKGKVIVIGVG 175 (254)
Q Consensus 136 ~~~~~~~d~v~-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~ 175 (254)
...+ .||.|+ | |+|.. ..+..+++.++++ |.++.....
T Consensus 303 ~~~~-~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs 368 (431)
T PRK14903 303 YVQD-TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT 368 (431)
T ss_pred hhhc-cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence 1122 799998 3 54431 1266788899999 997765443
No 494
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.57 E-value=0.094 Score=41.33 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=49.9
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHh----cCCce---EeCCCCCCCchHHHHHHHhh-CCCC
Q 025336 71 SSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEA----FGMTD---FINPDDEPNKSISELVKGIT-HGMG 141 (254)
Q Consensus 71 ~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~----~g~~~---v~~~~~~~~~~~~~~i~~~~-~~~~ 141 (254)
.++||+|+ |.+|..++..+...|. +|+++++++++.+.+.. .+... ..|..+ .+++...+.++. ...+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcCC
Confidence 47999987 9999999998888999 89999898776655433 22221 124333 123333332321 1236
Q ss_pred ccEEEEcCCC
Q 025336 142 VDYCFECTGV 151 (254)
Q Consensus 142 ~d~v~d~~g~ 151 (254)
+|.+|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999987764
No 495
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=95.57 E-value=0.086 Score=43.42 Aligned_cols=100 Identities=17% Similarity=0.287 Sum_probs=60.2
Q ss_pred EEEEEcCCHHHHHHHHHHHHcC----CCeEEEEcC--CcccHHHHHhcCC--------------ceEeCCCCC---CCch
Q 025336 72 SVAVLGLGTVGLGAVDGARMQG----AAKIIGIDK--NPWKKEKGEAFGM--------------TDFINPDDE---PNKS 128 (254)
Q Consensus 72 ~vlI~G~g~~G~~~~~~a~~~g----~~~v~~v~~--~~~~~~~~~~~g~--------------~~v~~~~~~---~~~~ 128 (254)
+|.|.|.|.+|+..++.+...+ + +|+++-. +.+.+.++-++.. ..+++.+.. ...+
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999988653 5 6666622 2233344433221 011111110 0001
Q ss_pred HHHHHHHhhCCCCccEEEEcCCChhHHHHHHHHcccCCcEEEEEccCC
Q 025336 129 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 176 (254)
Q Consensus 129 ~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 176 (254)
..+ + .+ +..++|+||+|+|.....+.+...+..+ ++.|+++.+.
T Consensus 80 p~~-~-~w-~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP~ 123 (325)
T TIGR01532 80 PEA-L-PW-RALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHPG 123 (325)
T ss_pred hhh-c-cc-cccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCCC
Confidence 111 1 11 2238999999999887778888889888 8888888663
No 496
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=95.57 E-value=0.089 Score=43.60 Aligned_cols=98 Identities=18% Similarity=0.204 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhh-CCCCccEEE
Q 025336 68 EKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGIT-HGMGVDYCF 146 (254)
Q Consensus 68 ~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~-~~~~~d~v~ 146 (254)
.++.+||-+|+|. |..+..+++..+..+++++|.+++-.+.+++.....-+.... .+. .+.. ....||+|+
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~---gD~----e~lp~~~~sFDvVI 183 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE---GDA----EDLPFPTDYADRYV 183 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe---ccH----HhCCCCCCceeEEE
Confidence 4678899998765 777778888765448999999988777776642111011111 222 1111 123699988
Q ss_pred EcCC------ChhHHHHHHHHcccCCcEEEEEcc
Q 025336 147 ECTG------VPSLLSEALETTKVGKGKVIVIGV 174 (254)
Q Consensus 147 d~~g------~~~~~~~~~~~l~~~~G~~v~~g~ 174 (254)
.+.. ....+..+.+.|+++ |++++.+.
T Consensus 184 s~~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 184 SAGSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred EcChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 6431 123578899999999 99987754
No 497
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.56 E-value=0.15 Score=39.54 Aligned_cols=102 Identities=17% Similarity=0.165 Sum_probs=59.9
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH-hcCCce---------EeCCCCCCCchHHHHHH
Q 025336 65 AEVEKGSSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE-AFGMTD---------FINPDDEPNKSISELVK 134 (254)
Q Consensus 65 ~~~~~~~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~-~~g~~~---------v~~~~~~~~~~~~~~i~ 134 (254)
..+.++.+||+.|+|. |.-++-+|. .|+ +|++++.++.-.+.+. +.+... .....+ ..-....+.
T Consensus 33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~--v~~~~~D~~ 107 (218)
T PRK13255 33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE--ITIYCGDFF 107 (218)
T ss_pred hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc--eEEEECccc
Confidence 3445678999998774 777777765 799 9999999998777642 222110 000000 000000111
Q ss_pred Hhh--CCCCccEEEEcCC----C----hhHHHHHHHHcccCCcEEEEE
Q 025336 135 GIT--HGMGVDYCFECTG----V----PSLLSEALETTKVGKGKVIVI 172 (254)
Q Consensus 135 ~~~--~~~~~d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~ 172 (254)
++. ....||.++|... . +..+..+.++|+|+ |++.++
T Consensus 108 ~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 108 ALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred CCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 111 1127899999653 1 23578888999999 975543
No 498
>PRK07578 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.35 Score=36.66 Aligned_cols=63 Identities=24% Similarity=0.367 Sum_probs=40.3
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHHhcCCceEeCCCCCCCchHHHHHHHhhCCCCccEEEEcCC
Q 025336 72 SVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 150 (254)
Q Consensus 72 ~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g 150 (254)
++||.|+ |++|...+..+... . +|+.+++++. ....|..+ .++....+.+. + ++|+++.+.|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~----------~~~~D~~~--~~~~~~~~~~~--~-~id~lv~~ag 64 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSG----------DVQVDITD--PASIRALFEKV--G-KVDAVVSAAG 64 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCC----------ceEecCCC--hHHHHHHHHhc--C-CCCEEEECCC
Confidence 5899986 89999888776655 6 8998877653 12234443 12233333322 2 7899998887
Q ss_pred C
Q 025336 151 V 151 (254)
Q Consensus 151 ~ 151 (254)
.
T Consensus 65 ~ 65 (199)
T PRK07578 65 K 65 (199)
T ss_pred C
Confidence 4
No 499
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.11 Score=41.80 Aligned_cols=80 Identities=15% Similarity=0.064 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCcccHHHH----HhcCCce-E--eCCCCCCCchHHHHHHHhhC-C
Q 025336 69 KGSSVAVLGL-GTVGLGAVDGARMQGAAKIIGIDKNPWKKEKG----EAFGMTD-F--INPDDEPNKSISELVKGITH-G 139 (254)
Q Consensus 69 ~~~~vlI~G~-g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 139 (254)
+..+++|+|+ |.+|..+++.+...|+ +|++++++.++.+.+ +..+... . .|..+ .+++...+.+... -
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD--PDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHhc
Confidence 3468999987 9999999998888999 888887776544332 2234322 1 23333 1233333333211 1
Q ss_pred CCccEEEEcCCC
Q 025336 140 MGVDYCFECTGV 151 (254)
Q Consensus 140 ~~~d~v~d~~g~ 151 (254)
.++|++|.+.|.
T Consensus 86 ~~id~vi~~Ag~ 97 (274)
T PRK07775 86 GEIEVLVSGAGD 97 (274)
T ss_pred CCCCEEEECCCc
Confidence 278999998874
No 500
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.55 E-value=0.23 Score=40.26 Aligned_cols=40 Identities=23% Similarity=0.233 Sum_probs=34.6
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCcccHHHHH
Q 025336 71 SSVAVLGLGTVGLGAVDGARMQGAAKIIGIDKNPWKKEKGE 111 (254)
Q Consensus 71 ~~vlI~G~g~~G~~~~~~a~~~g~~~v~~v~~~~~~~~~~~ 111 (254)
.+|.|+|+|.+|...++.+...|. +|+..+.+++..+.++
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~~ 43 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGF-DVTIYDISDEALEKAK 43 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHHH
Confidence 479999999999999998888899 8999999987766654
Done!