BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025343
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C5C8|MSRB2_ARATH Peptide methionine sulfoxide reductase B2, chloroplastic
OS=Arabidopsis thaliana GN=MSRB2 PE=1 SV=1
Length = 202
Score = 255 bits (651), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/146 (80%), Positives = 130/146 (89%), Gaps = 1/146 (0%)
Query: 105 KRSFRGGVVLAV-ASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGI 163
+R F GG ++A+ +S P SVNK EEEWRAILSPEQFRILRQK TEYPGTGEY+K F++GI
Sbjct: 54 RRGFHGGRIVAMGSSAPESVNKPEEEWRAILSPEQFRILRQKGTEYPGTGEYNKVFDDGI 113
Query: 164 YNCSACGTPLYKSTTKFNSGCGWPAFYEGLPGAINCSPDPDGLRIEITCAACGGHLGHVF 223
Y C+ CGTPLYKSTTKF+SGCGWPAF++GLPGAI +PDPDG RIEITCAACGGHLGHVF
Sbjct: 114 YCCAGCGTPLYKSTTKFDSGCGWPAFFDGLPGAITRTPDPDGRRIEITCAACGGHLGHVF 173
Query: 224 KGEGFPTPTDERHCVNSISLKFVPAN 249
KGEGFPTPTDERHCVNSISLKF P N
Sbjct: 174 KGEGFPTPTDERHCVNSISLKFTPEN 199
>sp|Q6AUK5|MSRB3_ORYSJ Peptide methionine sulfoxide reductase B3, chloroplastic OS=Oryza
sativa subsp. japonica GN=MSRB3 PE=2 SV=1
Length = 229
Score = 241 bits (614), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 109/132 (82%), Positives = 116/132 (87%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V KSEEEW AILSPEQFRILR K TEYPGTGEYDK F EG+Y C+ CGTPLYKS+TKFNS
Sbjct: 98 VQKSEEEWEAILSPEQFRILRLKGTEYPGTGEYDKLFAEGVYECAGCGTPLYKSSTKFNS 157
Query: 183 GCGWPAFYEGLPGAINCSPDPDGLRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSIS 242
GCGWPAFYEG PGAI +PDPDG RIEITCAACGGHLGHVFKGEGF TPTDERHCVNSIS
Sbjct: 158 GCGWPAFYEGFPGAIARTPDPDGRRIEITCAACGGHLGHVFKGEGFNTPTDERHCVNSIS 217
Query: 243 LKFVPANSGSSM 254
LKF+PA+ S +
Sbjct: 218 LKFIPASEDSKL 229
>sp|Q9ZS91|MSRB5_ARATH Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana
GN=MSRB5 PE=2 SV=1
Length = 139
Score = 231 bits (589), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 118/139 (84%)
Query: 116 VASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYK 175
+A+ P V K+EEEWRA+LSPEQFRILRQK TE PGTGEYDK FEEGI++C C TPLYK
Sbjct: 1 MAASPLVVQKTEEEWRAVLSPEQFRILRQKGTEKPGTGEYDKFFEEGIFDCVGCKTPLYK 60
Query: 176 STTKFNSGCGWPAFYEGLPGAINCSPDPDGLRIEITCAACGGHLGHVFKGEGFPTPTDER 235
STTKF+SGCGWPAF+EGLPGAIN +PDPDG R EITCAAC GHLGHVFKGEG+ PTDER
Sbjct: 61 STTKFDSGCGWPAFFEGLPGAINRTPDPDGRRTEITCAACDGHLGHVFKGEGYGNPTDER 120
Query: 236 HCVNSISLKFVPANSGSSM 254
HCVNS+S+ F PA S S +
Sbjct: 121 HCVNSVSISFNPAKSSSII 139
>sp|Q10L32|MSRB5_ORYSJ Peptide methionine sulfoxide reductase B5 OS=Oryza sativa subsp.
japonica GN=MSRB5 PE=2 SV=1
Length = 136
Score = 230 bits (586), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 101/136 (74%), Positives = 119/136 (87%)
Query: 114 LAVASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPL 173
+A + + +S+EEWRA+LSPEQFRILR K TE PGTGEY+K + +G+YNC+ CGTPL
Sbjct: 1 MASSGDSSGKQRSDEEWRAVLSPEQFRILRLKGTELPGTGEYNKFYGDGVYNCAGCGTPL 60
Query: 174 YKSTTKFNSGCGWPAFYEGLPGAINCSPDPDGLRIEITCAACGGHLGHVFKGEGFPTPTD 233
YKSTTKF+SGCGWPAF+EGLPGAIN +PDPDG R+EITCAACGGHLGHVFKGEGF TPTD
Sbjct: 61 YKSTTKFDSGCGWPAFFEGLPGAINRTPDPDGRRVEITCAACGGHLGHVFKGEGFKTPTD 120
Query: 234 ERHCVNSISLKFVPAN 249
ERHCVNS+S+KF PA+
Sbjct: 121 ERHCVNSVSIKFTPAS 136
>sp|Q9M0Z6|MSRB3_ARATH Peptide methionine sulfoxide reductase B3 OS=Arabidopsis thaliana
GN=MSRB3 PE=2 SV=2
Length = 176
Score = 227 bits (578), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 106/150 (70%), Positives = 116/150 (77%), Gaps = 1/150 (0%)
Query: 102 EQNKRSFRGGVVLAVA-SGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFE 160
E + GV VA + P SV K +EEWRAILSPEQFRILRQK TEYPGTGEY +
Sbjct: 25 ESDSICLSSGVASTVAMAAPGSVQKGDEEWRAILSPEQFRILRQKGTEYPGTGEYVNFDK 84
Query: 161 EGIYNCSACGTPLYKSTTKFNSGCGWPAFYEGLPGAINCSPDPDGLRIEITCAACGGHLG 220
EG+Y C C PLYKSTTKFN+GCGWPAF+EG+PGAI + DPDG RIEI CA CGGHLG
Sbjct: 85 EGVYGCVGCNAPLYKSTTKFNAGCGWPAFFEGIPGAITRTTDPDGRRIEINCATCGGHLG 144
Query: 221 HVFKGEGFPTPTDERHCVNSISLKFVPANS 250
HVFKGEGF TPTDERHCVNS+SLKF PA S
Sbjct: 145 HVFKGEGFATPTDERHCVNSVSLKFTPAAS 174
>sp|Q9M0Z5|MSRB4_ARATH Peptide methionine sulfoxide reductase B4 OS=Arabidopsis thaliana
GN=MSRB4 PE=2 SV=1
Length = 139
Score = 215 bits (548), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 98/130 (75%), Positives = 109/130 (83%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V K+EEEWRA+LSPEQFRILRQK TE PGT EYDK FEEGI++C C TPLYKSTTKF++
Sbjct: 8 VKKTEEEWRAVLSPEQFRILRQKGTETPGTEEYDKFFEEGIFSCIGCKTPLYKSTTKFDA 67
Query: 183 GCGWPAFYEGLPGAINCSPDPDGLRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSIS 242
GCGWPAF+EGLPGAIN +PDPDG R EITCA C GHLGHV KGEG+ TPTDER CVNS+S
Sbjct: 68 GCGWPAFFEGLPGAINRAPDPDGRRTEITCAVCDGHLGHVHKGEGYSTPTDERLCVNSVS 127
Query: 243 LKFVPANSGS 252
+ F PA S
Sbjct: 128 INFNPAKPSS 137
>sp|Q84JT6|MSRB9_ARATH Peptide methionine sulfoxide reductase B9 OS=Arabidopsis thaliana
GN=MSRB9 PE=2 SV=1
Length = 143
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 90/131 (68%), Positives = 108/131 (82%)
Query: 115 AVASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLY 174
AVA SV K +++WRAILSPEQFR+LR+K TE G GEY K F++GIY+C+ C TPLY
Sbjct: 7 AVAPSTGSVQKKDQDWRAILSPEQFRVLREKGTENRGKGEYTKLFDDGIYSCAGCATPLY 66
Query: 175 KSTTKFNSGCGWPAFYEGLPGAINCSPDPDGLRIEITCAACGGHLGHVFKGEGFPTPTDE 234
KSTTKF+SGCGWP+F++ +PGAI +P+ G R+EITCAAC GHLGHV KGEGFPT TDE
Sbjct: 67 KSTTKFDSGCGWPSFFDAIPGAIKQTPEAGGRRMEITCAACDGHLGHVVKGEGFPTATDE 126
Query: 235 RHCVNSISLKF 245
RHCVNS+SLKF
Sbjct: 127 RHCVNSVSLKF 137
>sp|O49707|MSRB8_ARATH Peptide methionine sulfoxide reductase B8 OS=Arabidopsis thaliana
GN=MSRB8 PE=2 SV=1
Length = 143
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 111/141 (78%), Gaps = 2/141 (1%)
Query: 112 VVLAVASGPAS--VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSAC 169
+ + A+ P+S K +EEWRA+LSPEQFR+LR K T+ G GE+ K FEEG Y+C+ C
Sbjct: 1 MAMTAAAVPSSGSFQKQDEEWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGC 60
Query: 170 GTPLYKSTTKFNSGCGWPAFYEGLPGAINCSPDPDGLRIEITCAACGGHLGHVFKGEGFP 229
GT LYKSTTKF+SGCGWPAF++ +PGAI +P+ G R+EITCA C GHLGHVFKGEG+
Sbjct: 61 GTALYKSTTKFDSGCGWPAFFDAIPGAIKQTPEAGGRRMEITCAVCDGHLGHVFKGEGYS 120
Query: 230 TPTDERHCVNSISLKFVPANS 250
TPTD+RHCVNS+SLKF A+S
Sbjct: 121 TPTDQRHCVNSVSLKFASADS 141
>sp|Q8VY86|MSRB7_ARATH Peptide methionine sulfoxide reductase B7 OS=Arabidopsis thaliana
GN=MSRB7 PE=2 SV=1
Length = 144
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 104/130 (80%)
Query: 121 ASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKF 180
S K +EEWRA+LSPEQFR+LR K T+ G GE+ K FEEG Y+C+ CGT LYKSTTKF
Sbjct: 13 GSFQKQDEEWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCGTALYKSTTKF 72
Query: 181 NSGCGWPAFYEGLPGAINCSPDPDGLRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNS 240
+SGCGWPAF++ +PGAI +P+ G R+EITCA C GHLGHVFKGEG+ TPTD+RHCVNS
Sbjct: 73 DSGCGWPAFFDAIPGAIKQTPEAGGRRMEITCAVCDGHLGHVFKGEGYSTPTDQRHCVNS 132
Query: 241 ISLKFVPANS 250
+SLKF A S
Sbjct: 133 VSLKFSSAGS 142
>sp|Q8GWF4|MSRB6_ARATH Peptide methionine sulfoxide reductase B6 OS=Arabidopsis thaliana
GN=MSRB6 PE=2 SV=1
Length = 153
Score = 194 bits (493), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 101/126 (80%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ KS EEWR +LSPEQF+ILR+K+ E G+GEY K FEEGIY C CG P+YKSTTKF+S
Sbjct: 24 IKKSNEEWRTVLSPEQFKILREKSIEKRGSGEYVKLFEEGIYCCVGCGNPVYKSTTKFDS 83
Query: 183 GCGWPAFYEGLPGAINCSPDPDGLRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSIS 242
GCGWPAF++ +PGAIN + + GLR EITC C GHLGHV K EGFPTPTDERHCVNS++
Sbjct: 84 GCGWPAFFDAIPGAINRTEERAGLRYEITCTKCDGHLGHVLKNEGFPTPTDERHCVNSVA 143
Query: 243 LKFVPA 248
LKF A
Sbjct: 144 LKFSSA 149
>sp|Q9Y7K1|YGL4_SCHPO Uncharacterized protein C216.04c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC216.04c PE=3 SV=1
Length = 138
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 93/126 (73%), Gaps = 3/126 (2%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHF-EEGIYNCSACGTPLYKSTTKFN 181
+ KSE+EW+ L PE++RI+RQK TE+PG G + F ++G++ C+AC LYK++TKF
Sbjct: 5 LEKSEDEWKKELGPEKYRIMRQKGTEHPGAGRFTHQFPKQGVFVCAACKELLYKASTKFE 64
Query: 182 SGCGWPAFYEGLPGAINCSPDPD-GL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
S CGWPAF++ LPG + D G+ R+E CA CGGHLGH+FKGEG+ PTDERHC+N
Sbjct: 65 SHCGWPAFFDNLPGKVKRIEDNSYGMHRVEAVCANCGGHLGHIFKGEGYSNPTDERHCIN 124
Query: 240 SISLKF 245
S SL+F
Sbjct: 125 SASLEF 130
>sp|Q6ADJ8|MSRB_LEIXX Peptide methionine sulfoxide reductase MsrB OS=Leifsonia xyli
subsp. xyli (strain CTCB07) GN=msrB PE=3 SV=1
Length = 139
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 91/140 (65%), Gaps = 4/140 (2%)
Query: 114 LAVASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPL 173
+ G + KS+EEWR L+PEQ+ +LRQ TE P TGE G+Y C+ACG L
Sbjct: 1 MDAGKGEYQIAKSDEEWRRELTPEQYGVLRQAGTEQPWTGELLDESRAGVYACAACGAEL 60
Query: 174 YKSTTKFNSGCGWPAFYEGL-PGAINCSPDPD-GL-RIEITCAACGGHLGHVFKGEGFPT 230
++S TKF+SGCGWP+FYE + P A+ D G+ R E+ CA CG HLGHVF +GF T
Sbjct: 61 FRSGTKFDSGCGWPSFYESVRPEAVELLEDTRLGITRTEVRCANCGSHLGHVFP-DGFRT 119
Query: 231 PTDERHCVNSISLKFVPANS 250
PT +R+C+NSISL F P +
Sbjct: 120 PTGDRYCMNSISLDFQPEDE 139
>sp|P25566|MXR2_YEAST Peptide methionine sulfoxide reductase 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MXR2 PE=1
SV=1
Length = 168
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 90/153 (58%), Gaps = 12/153 (7%)
Query: 105 KRSF--RGGVVLAV---ASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHF 159
+R+F R +VL S S ++ +W L+P Q +LR KATE P TG Y
Sbjct: 13 RRTFPGRRNIVLTQYWNKSKKMSDESNDVKWNDALTPLQLMVLRDKATERPNTGAYLHTN 72
Query: 160 EEGIYNCSACGTPLYKSTTKFNSGCGWPAFYEGL-PGAINCSPDPDGL--RIEITCAACG 216
E G+Y+C+ C PLY S KF++ CGWPAFYE + PGAI D + R+EI CA CG
Sbjct: 73 ESGVYHCANCDRPLYSSKAKFDARCGWPAFYEEVSPGAITYHRDNSLMPARVEICCARCG 132
Query: 217 GHLGHVFKGEGFPT----PTDERHCVNSISLKF 245
GHLGHVF+GEG+ P D RHCVNS SL
Sbjct: 133 GHLGHVFEGEGWKQLLNLPKDTRHCVNSASLNL 165
>sp|Q46EH1|MSRB_METBF Peptide methionine sulfoxide reductase MsrB OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=msrB PE=3 SV=1
Length = 142
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Query: 122 SVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFN 181
+V KSEEEW+ +L+PEQ+ +LRQK TE P +G + E+G+Y C+ACG L+ S TKF
Sbjct: 5 AVEKSEEEWKKVLTPEQYHVLRQKGTERPFSGNLYYNKEKGVYTCAACGQELFSSDTKFE 64
Query: 182 SGCGWPAFYEGL-PGAINCSPDPDGL--RIEITCAACGGHLGHVFKGEGFPTPTDERHCV 238
SG GWP+FY+ + + D RIE+ C+ CG HLGHVF E P PT +R+C+
Sbjct: 65 SGTGWPSFYDVISSDRVRLKEDTSYFMNRIEVVCSRCGSHLGHVF--EDGPAPTGKRYCI 122
Query: 239 NSISLKFVPANSG 251
NS+SL F G
Sbjct: 123 NSVSLNFKTEEEG 135
>sp|A2SGN7|MSRB_METPP Peptide methionine sulfoxide reductase MsrB OS=Methylibium
petroleiphilum (strain PM1) GN=msrB PE=3 SV=1
Length = 138
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 82/131 (62%), Gaps = 5/131 (3%)
Query: 120 PASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTK 179
P V K+E EWRA L P QF + R ATE TG+Y H++EG+Y+C C PL+ S TK
Sbjct: 8 PRKVQKTEAEWRAQLDPMQFEVTRHGATERAFTGKYADHWQEGVYHCVGCNAPLFDSGTK 67
Query: 180 FNSGCGWPAFYEGLPGAI--NCSPDPDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERH 236
F++GCGWP++++ L G I G+ R+E+ C CG HLGHVF P PT ER+
Sbjct: 68 FDAGCGWPSYFQPLRGEIIDRVVDRSHGMVRVEVRCQDCGAHLGHVFPDG--PEPTGERY 125
Query: 237 CVNSISLKFVP 247
C+NS SL F P
Sbjct: 126 CINSASLGFEP 136
>sp|Q8PWF5|MSRB_METMA Peptide methionine sulfoxide reductase MsrB OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=msrB PE=3 SV=1
Length = 140
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ KSEE+W+++L+PEQ+ +LRQK TE P +G + E+GIY C+ACG L+ S TKF S
Sbjct: 6 IEKSEEDWKSVLTPEQYHVLRQKGTERPFSGNLYYNKEKGIYTCAACGQELFSSDTKFES 65
Query: 183 GCGWPAFYEGLPGA-INCSPDPDGL--RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
G GWP+FY+ + + D RIE+ C+ CG HLGHVF E P PT +R+C+N
Sbjct: 66 GTGWPSFYDVISSDRVRLHEDNSYFMKRIEVVCSRCGSHLGHVF--EDGPEPTGQRYCIN 123
Query: 240 SISLKFV 246
S+SL F
Sbjct: 124 SVSLGFT 130
>sp|Q8UGX7|MSRB_AGRT5 Peptide methionine sulfoxide reductase MsrB OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=msrB PE=3 SV=1
Length = 135
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 84/129 (65%), Gaps = 5/129 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
VNKS+ +WR L+PEQ+ ILR+ TE P TG Y E+G+Y C+AC PL+ S TKF++
Sbjct: 9 VNKSDADWREQLTPEQYHILREHGTERPFTGPYWNSTEKGLYRCAACDEPLFLSDTKFDA 68
Query: 183 GCGWPAFYEGL-PGAINCSPDPDG--LRIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+++E + PGA+ D +R EI CA CGGHLGHVF P PT R+C+N
Sbjct: 69 GCGWPSYFEPVKPGAVTEHRDSTHGMVRTEIRCANCGGHLGHVFPDG--PPPTGLRYCIN 126
Query: 240 SISLKFVPA 248
S+ F P
Sbjct: 127 GHSMVFEPV 135
>sp|Q8F7W8|MSRB_LEPIN Peptide methionine sulfoxide reductase MsrB OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar Lai
(strain 56601) GN=msrB PE=3 SV=3
Length = 131
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
VNKS+E+W+ L+PEQ+RILRQK TE TG K+ ++G Y C+ACG L+ S TK+ S
Sbjct: 5 VNKSDEDWKKELTPEQYRILRQKGTEMAFTGALYKNQDKGTYVCAACGAVLFSSDTKYES 64
Query: 183 GCGWPAFYEGL-PGAINCSPDPD-GL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
G GWP+FY+ + G ++ D G+ R EI C+ CGGHLGHVF +G P PT R+C+N
Sbjct: 65 GSGWPSFYQPVKDGVVDKQKDSSHGMERTEILCSKCGGHLGHVFN-DG-PRPTGLRYCIN 122
Query: 240 SISLKF 245
S SLKF
Sbjct: 123 SASLKF 128
>sp|Q72NN2|MSRB_LEPIC Peptide methionine sulfoxide reductase MsrB OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar
copenhageni (strain Fiocruz L1-130) GN=msrB PE=3 SV=3
Length = 131
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
VNKS+E+W+ L+PEQ+RILRQK TE TG K+ ++G Y C+ACG L+ S TK+ S
Sbjct: 5 VNKSDEDWKKELTPEQYRILRQKGTEMAFTGALYKNQDKGTYVCAACGAVLFSSDTKYES 64
Query: 183 GCGWPAFYEGL-PGAINCSPDPD-GL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
G GWP+FY+ + G ++ D G+ R EI C+ CGGHLGHVF +G P PT R+C+N
Sbjct: 65 GSGWPSFYQPVKDGVVDKQKDSSHGMERTEILCSKCGGHLGHVFN-DG-PRPTGLRYCIN 122
Query: 240 SISLKF 245
S SLKF
Sbjct: 123 SASLKF 128
>sp|Q8XYL1|MSRB_RALSO Peptide methionine sulfoxide reductase MsrB OS=Ralstonia
solanacearum (strain GMI1000) GN=msrB PE=3 SV=1
Length = 128
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 122 SVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFN 181
++ K++ EWR LS ++R+ R+ ATE P TG Y H+ GIY+C CGTPL++S+TKF+
Sbjct: 2 TIEKTDAEWRDQLSDIEYRVTREAATERPFTGRYWDHWARGIYHCVCCGTPLFESSTKFD 61
Query: 182 SGCGWPAFYEGLPGAINCSPDPDG---LRIEITCAACGGHLGHVFKGEGFPTPTDERHCV 238
+GCGWP+++ + G + +RIE+ C CG HLGHVF E P PT R+C+
Sbjct: 62 AGCGWPSYFAPINGEVIAEKTDHSHGMVRIEVQCKQCGAHLGHVF--EDGPAPTGLRYCI 119
Query: 239 NSISLKF 245
NS +LKF
Sbjct: 120 NSAALKF 126
>sp|Q4ZQC6|MSRB_PSEU2 Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=msrB PE=3 SV=1
Length = 131
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 79/128 (61%), Gaps = 5/128 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ EEW+ +L PEQ+ + R K TE P +G+YDK +GIY+C C PL+ STTKF+S
Sbjct: 4 LQKTLEEWKQMLDPEQYNVCRLKGTERPFSGKYDKVKTDGIYHCICCDEPLFDSTTKFDS 63
Query: 183 GCGWPAFYEGLP--GAINCSPDPDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+FY L I G+ R E+ CA C HLGHVF P PT R+C+N
Sbjct: 64 GCGWPSFYAPLENSAVIEVRDMSHGMIRTEVVCAKCDAHLGHVFPDG--PPPTGLRYCIN 121
Query: 240 SISLKFVP 247
S+ L VP
Sbjct: 122 SVCLDLVP 129
>sp|B1J4W5|MSRB_PSEPW Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas putida
(strain W619) GN=msrB PE=3 SV=1
Length = 133
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 81/130 (62%), Gaps = 5/130 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
++K+ EEWRA+L PEQ+++ R K TE P TG+Y+ G Y+C C PL+ S TKF+S
Sbjct: 4 IDKTLEEWRAMLDPEQYQVCRLKGTERPFTGKYNSEKRAGTYHCICCDLPLFDSNTKFDS 63
Query: 183 GCGWPAFYEGLPGA--INCSPDPDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+FY + + I G+ R E+TCA C HLGHVF P PT R+C+N
Sbjct: 64 GCGWPSFYAPIEDSAMIETRDTSHGMIRTEVTCAQCDAHLGHVFPDG--PPPTGLRYCIN 121
Query: 240 SISLKFVPAN 249
S+ L F P +
Sbjct: 122 SVCLDFKPRD 131
>sp|O26807|MSRB_METTH Peptide methionine sulfoxide reductase MsrB OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=msrB PE=1 SV=1
Length = 151
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 5/131 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ S++EWR IL PE FR+ R+ TE P TG+Y ++GIY C CGT L+ S TKF+S
Sbjct: 21 IELSDDEWREILDPEAFRVARKAGTEPPFTGKYHDLHDDGIYRCICCGTDLFDSETKFDS 80
Query: 183 GCGWPAFYEGL-PGAINCSPDPD--GLRIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
G GWP+FY+ + I D +R E+ CA C HLGHVF + P PT +R+C+N
Sbjct: 81 GTGWPSFYDVVSEHNIKLREDRSLGMVRCEVLCARCDAHLGHVF--DDGPRPTGKRYCMN 138
Query: 240 SISLKFVPANS 250
S +LKF+P +
Sbjct: 139 SAALKFIPRDQ 149
>sp|A5GQT3|MSRB_SYNR3 Peptide methionine sulfoxide reductase MsrB OS=Synechococcus sp.
(strain RCC307) GN=msrB PE=3 SV=1
Length = 136
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 79/126 (62%), Gaps = 5/126 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V SE +WR+ L+PEQFRI R+ TE TG Y H +G+Y C CG L++S KF+S
Sbjct: 9 VEASENDWRSKLTPEQFRITREGGTERAFTGAYWNHKGDGMYRCICCGAELFRSDRKFDS 68
Query: 183 GCGWPAFYEGL-PGAINCSPDPDG--LRIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
G GWP+F+EG+ P AI D +R EI CA C HLGHVF+ PTPT R+CVN
Sbjct: 69 GTGWPSFWEGVNPEAIRTIQDVSHGMVRTEIRCAKCDSHLGHVFQDS--PTPTGLRYCVN 126
Query: 240 SISLKF 245
S SL F
Sbjct: 127 SASLDF 132
>sp|Q3SJU1|MSRB_THIDA Peptide methionine sulfoxide reductase MsrB OS=Thiobacillus
denitrificans (strain ATCC 25259) GN=msrB PE=3 SV=1
Length = 132
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 82/128 (64%), Gaps = 5/128 (3%)
Query: 125 KSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNSGC 184
K++ +WRA LSPEQ+RILR++ TE TGEY H G Y C+ACG PL+ S+ KF+SG
Sbjct: 7 KTDAQWRAELSPEQYRILREQGTERAFTGEYWDHHANGEYRCAACGAPLFSSSAKFDSGT 66
Query: 185 GWPAFYEGLPG-AINCSPDPDG--LRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSI 241
GWP+FYE L A+ D +R E C+ C HLGHVF +G P PT R+C+NS
Sbjct: 67 GWPSFYEALNAQAVRERTDTTHGMVRTEALCSRCNSHLGHVFP-DG-PPPTGLRYCINSA 124
Query: 242 SLKFVPAN 249
SL F P +
Sbjct: 125 SLSFHPKD 132
>sp|Q8INK9|MSRB_DROME Methionine-R-sulfoxide reductase B1 OS=Drosophila melanogaster
GN=SelR PE=1 SV=3
Length = 208
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 93/159 (58%), Gaps = 25/159 (15%)
Query: 118 SGPASV--NKSE------EEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSAC 169
SGPA+ NKSE EE R L+P Q+++ ++ TE P TG Y+KH+E+G+Y C C
Sbjct: 37 SGPAATMDNKSEKVTVNKEELRKRLTPVQYQVTQEAGTERPFTGCYNKHYEKGVYQCIVC 96
Query: 170 GTPLYKSTTKFNSGCGWPAFYEGLP-GAINCSPD--------------PDGLRIEITCAA 214
L+ S TK++SGCGWPAF + L G + D P+ +R E+ CA
Sbjct: 97 HQDLFSSETKYDSGCGWPAFNDVLDKGKVTLHRDASIPGGNILLLIAHPERIRTEVRCAR 156
Query: 215 CGGHLGHVFKGEGFPTPTDERHCVNSISLKFVPANSGSS 253
C H+GHVF E P PT +R+C+NS S++FV A+ +S
Sbjct: 157 CNAHMGHVF--EDGPKPTRKRYCINSASIEFVNADPATS 193
>sp|Q1ID16|MSRB_PSEE4 Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas
entomophila (strain L48) GN=msrB PE=3 SV=1
Length = 131
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 81/130 (62%), Gaps = 5/130 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
++K+ EEWRA+L P Q+++ R K TE P +G+Y+ +G+Y+C C PL+ S KF+S
Sbjct: 4 IDKTLEEWRAMLDPAQYQVCRLKGTERPFSGKYNSERRDGVYHCICCDLPLFDSKAKFDS 63
Query: 183 GCGWPAFYEGLPGA--INCSPDPDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+FYE + A I G+ R E+TCA C HLGHVF P PT R+C+N
Sbjct: 64 GCGWPSFYEPIEEAAMIEIRDTSHGMIRTEVTCAQCDAHLGHVFPDG--PPPTGLRYCIN 121
Query: 240 SISLKFVPAN 249
S+ L P +
Sbjct: 122 SVCLDLKPRD 131
>sp|C3K735|MSRB_PSEFS Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas
fluorescens (strain SBW25) GN=msrB PE=3 SV=1
Length = 130
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 81/128 (63%), Gaps = 5/128 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ +EW+A+L PEQ+ + R K TE P +G+Y+ +G+Y+C C PL+ STTKF+S
Sbjct: 4 LQKTVDEWKAMLDPEQYNVCRLKGTERPFSGKYNATKTDGVYHCICCNAPLFDSTTKFDS 63
Query: 183 GCGWPAFYEGLPGA--INCSPDPDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+FY + + + G+ R E+TCA C HLGHVF P PT R+C+N
Sbjct: 64 GCGWPSFYAPIADSAMVEIRDVSHGMIRTEVTCAKCDAHLGHVFPDG--PPPTGLRYCIN 121
Query: 240 SISLKFVP 247
S+ L VP
Sbjct: 122 SVCLDLVP 129
>sp|Q8DJK9|MSRB_THEEB Peptide methionine sulfoxide reductase MsrB OS=Thermosynechococcus
elongatus (strain BP-1) GN=msrB PE=3 SV=1
Length = 135
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V K++ EW+A L+PEQ+ + R+K TE TG Y + + G+Y+C CGTPL++S TK++S
Sbjct: 4 VVKTDAEWQAQLTPEQYYVTRKKGTERAFTGCYWNNKKPGLYSCVCCGTPLFRSETKYDS 63
Query: 183 GCGWPAFYEGL-PGAINCSPDPDG--LRIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
G GWP+F++ L P I D +R E+ CA C HLGHVF E P PT R+C+N
Sbjct: 64 GTGWPSFWQPLDPNNIRMERDLSHGMVRTEVLCAVCDAHLGHVF--EDGPPPTGLRYCIN 121
Query: 240 SISLKFVPANSGSS 253
S +L FVP ++ SS
Sbjct: 122 SAALAFVPESAASS 135
>sp|Q48FR2|MSRB_PSE14 Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6) GN=msrB PE=1
SV=1
Length = 131
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 81/128 (63%), Gaps = 5/128 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ EEW+ +L P Q+++ R K TE P +G+Y++ EG+Y+C C PL+ STTKF+S
Sbjct: 4 LQKTLEEWKEMLDPAQYQVCRLKGTERPFSGKYNETKTEGVYHCICCNEPLFDSTTKFDS 63
Query: 183 GCGWPAFYEGLPGA--INCSPDPDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+FY L G+ + G+ R E+ CA C HLGHVF P PT R+C+N
Sbjct: 64 GCGWPSFYAPLEGSAVVEVRDVSHGMIRTEVVCAKCDAHLGHVFPDG--PPPTGLRYCIN 121
Query: 240 SISLKFVP 247
S+ L VP
Sbjct: 122 SVCLDLVP 129
>sp|Q2SJP9|MSRB_HAHCH Peptide methionine sulfoxide reductase MsrB OS=Hahella chejuensis
(strain KCTC 2396) GN=msrB PE=3 SV=1
Length = 139
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 82/132 (62%), Gaps = 9/132 (6%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V KS++EWR L+ EQ+R+ R K TE P TGEY E G+Y C CG PL+ S K++S
Sbjct: 4 VKKSDQEWRQQLTDEQYRVTRGKGTERPFTGEYYDTKEAGVYVCVCCGEPLFTSENKYDS 63
Query: 183 GCGWPAFY-----EGLPGAINCSPDPDGLRIEITCAACGGHLGHVFKGEGFPTPTDERHC 237
GCGWP+F+ E + I+ S +R EI C+ C HLGHVF + P PT +R+C
Sbjct: 64 GCGWPSFWAPMDKEKITEEIDMSHMM--VRTEILCSKCDAHLGHVF--DDGPQPTGQRYC 119
Query: 238 VNSISLKFVPAN 249
VNS SL+F A+
Sbjct: 120 VNSASLRFHSAD 131
>sp|Q1QXV3|MSRB_CHRSD Peptide methionine sulfoxide reductase MsrB OS=Chromohalobacter
salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB
13768) GN=msrB PE=3 SV=1
Length = 133
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 83/130 (63%), Gaps = 4/130 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V KSE EW+ L+PEQ+R+ R+K TE P TG+Y E+GIY+C CG PL+++ KF++
Sbjct: 5 VQKSEHEWQQQLTPEQYRVTREKGTERPFTGDYQVSDEQGIYHCVCCGAPLFENEHKFDA 64
Query: 183 GCGWPAFYEGLPGA-INCSPD-PDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+F L A I D G+ RIE+TC C HLGHVF +G T R+C+N
Sbjct: 65 GCGWPSFDRPLADASIEEHLDTSHGMRRIEVTCRRCDSHLGHVFP-DGPQDTTGLRYCIN 123
Query: 240 SISLKFVPAN 249
S+SL F P
Sbjct: 124 SVSLDFHPGE 133
>sp|Q8BU85|MSRB3_MOUSE Methionine-R-sulfoxide reductase B3, mitochondrial OS=Mus musculus
GN=Msrb3 PE=1 SV=2
Length = 253
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
Query: 126 SEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNSGCG 185
S++E R L+P Q+ + ++K TE GEY H + GIY C CGTPL+KS TKF+SG G
Sbjct: 106 SQQELRKRLTPLQYHVTQEKGTESAFEGEYTHHKDPGIYKCVVCGTPLFKSETKFDSGSG 165
Query: 186 WPAFYEGLPG-AINCSPD-PDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSIS 242
WPAF++ + AI + D G+ R+E +C+ CG HLGH+F + P PT +R+C+NS S
Sbjct: 166 WPAFHDVISSEAIEFTDDFSYGMHRVETSCSQCGAHLGHIF--DDGPRPTGKRYCINSAS 223
Query: 243 LKFVPANS 250
L F PA+S
Sbjct: 224 LSFTPADS 231
>sp|Q0DC89|MSRB1_ORYSJ Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza
sativa subsp. japonica GN=MSRB1 PE=2 SV=2
Length = 214
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 122 SVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFN 181
S + ++EEWR L+ +Q+ I RQK TE TGEY GIY+C C TPL++S+TKF+
Sbjct: 86 STSLTDEEWRKRLTKDQYYITRQKGTERAFTGEYWNTKTPGIYHCVCCDTPLFESSTKFD 145
Query: 182 SGCGWPAFYEGLPGAINCSPDPDGL---RIEITCAACGGHLGHVFKGEGFPTPTDERHCV 238
SG GWP++Y+ + + C D + R E+ CA C HLGHVF + P PT +R+C+
Sbjct: 146 SGTGWPSYYQPIGDNVKCKLDMSIIFMPRTEVLCAVCDAHLGHVF--DDGPRPTGKRYCI 203
Query: 239 NSISLKF 245
NS SLK
Sbjct: 204 NSASLKL 210
>sp|Q88LQ6|MSRB_PSEPK Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas putida
(strain KT2440) GN=msrB PE=3 SV=1
Length = 131
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 5/130 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ +EWR++L PEQ+++ R K TE P +G+Y+ +GIY+C CG PL+ + TKF++
Sbjct: 4 IEKTLDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCGLPLFDAQTKFDA 63
Query: 183 GCGWPAFYEGLPGA--INCSPDPDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+FY + + I G+ R E+TCA C HLGHVF P PT R+C+N
Sbjct: 64 GCGWPSFYAPIEDSAMIEIRDTSHGMIRTEVTCARCDAHLGHVFPDG--PPPTGLRYCIN 121
Query: 240 SISLKFVPAN 249
S+ + P +
Sbjct: 122 SVCIDLRPRD 131
>sp|B0KUQ0|MSRB_PSEPG Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas putida
(strain GB-1) GN=msrB PE=3 SV=1
Length = 131
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 81/130 (62%), Gaps = 5/130 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ +EWR++L PEQ+++ R K TE P +G+Y+ +GIY+C C PL+ + TKF+S
Sbjct: 4 IEKTLDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCNLPLFDAQTKFDS 63
Query: 183 GCGWPAFYEGLPGA--INCSPDPDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+FY + + I G+ R E+TCA C HLGHVF P PT R+C+N
Sbjct: 64 GCGWPSFYAPIEDSAMIEIRDTSHGMIRTEVTCARCDAHLGHVFPDG--PAPTGLRYCIN 121
Query: 240 SISLKFVPAN 249
S+ + P +
Sbjct: 122 SVCIDLRPRD 131
>sp|Q9C8M2|MSRB1_ARATH Peptide methionine sulfoxide reductase B1, chloroplastic
OS=Arabidopsis thaliana GN=MSRB1 PE=1 SV=1
Length = 202
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 126 SEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNSGCG 185
SE EW+ L+PEQ+ I RQK TE TGEY G+YNC C TPL+ S+TKF+SG G
Sbjct: 74 SENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTPGVYNCVCCDTPLFDSSTKFDSGTG 133
Query: 186 WPAFYEGLPGAINCSPDPDGL---RIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSIS 242
WP++Y+ + + D + R E+ CA C HLGHVF + P PT +R+C+NS +
Sbjct: 134 WPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAHLGHVF--DDGPRPTGKRYCLNSAA 191
Query: 243 LKF 245
LK
Sbjct: 192 LKL 194
>sp|Q3K935|MSRB_PSEPF Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas
fluorescens (strain Pf0-1) GN=msrB PE=3 SV=1
Length = 131
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 79/128 (61%), Gaps = 5/128 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ EEWRA+L PEQF + R ATE P +G+Y+ +G+Y+C C PL+ S TKF+S
Sbjct: 4 IEKTLEEWRAMLDPEQFNVCRLSATERPFSGKYNATKTDGVYHCICCNEPLFDSKTKFDS 63
Query: 183 GCGWPAFYEGL-PGAINCSPDPDG--LRIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+FY + A+ D +R E+ CA C HLGHVF P PT R+C+N
Sbjct: 64 GCGWPSFYAPIGDNAMTEIRDTSHGMIRTEVKCAKCDAHLGHVFPDG--PPPTGLRYCIN 121
Query: 240 SISLKFVP 247
S+ L VP
Sbjct: 122 SVCLDLVP 129
>sp|Q5R930|MSRB3_PONAB Methionine-R-sulfoxide reductase B3 OS=Pongo abelii GN=MSRB3 PE=2
SV=2
Length = 190
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
Query: 126 SEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNSGCG 185
S++E R L+P Q+ + ++K TE GEY H + GIY C CGTPL+KS TKF+SG G
Sbjct: 44 SQQELRKRLTPLQYHVTQEKGTESAFEGEYTHHKDPGIYKCVVCGTPLFKSETKFDSGSG 103
Query: 186 WPAFYEGLPG-AINCSPD-PDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSIS 242
WP+F++ + AI + D G+ R+E +C+ CG HLGH+F + P PT +R+C+NS +
Sbjct: 104 WPSFHDVISSEAITFTDDFSYGMHRVETSCSQCGAHLGHIF--DDGPRPTGKRYCINSAA 161
Query: 243 LKFVPANS 250
L F PA+S
Sbjct: 162 LSFTPADS 169
>sp|Q8IXL7|MSRB3_HUMAN Methionine-R-sulfoxide reductase B3 OS=Homo sapiens GN=MSRB3 PE=1
SV=2
Length = 192
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
Query: 126 SEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNSGCG 185
S++E R L+P Q+ + ++K TE GEY H + GIY C CGTPL+KS TKF+SG G
Sbjct: 46 SQQELRKRLTPLQYHVTQEKGTESAFEGEYTHHKDPGIYKCVVCGTPLFKSETKFDSGSG 105
Query: 186 WPAFYEGLPG-AINCSPD-PDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSIS 242
WP+F++ + AI + D G+ R+E +C+ CG HLGH+F + P PT +R+C+NS +
Sbjct: 106 WPSFHDVINSEAITFTDDFSYGMHRVETSCSQCGAHLGHIF--DDGPRPTGKRYCINSAA 163
Query: 243 LKFVPANS 250
L F PA+S
Sbjct: 164 LSFTPADS 171
>sp|C5BR54|MSRB_TERTT Peptide methionine sulfoxide reductase MsrB OS=Teredinibacter
turnerae (strain ATCC 39867 / T7901) GN=msrB PE=3 SV=1
Length = 135
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 80/124 (64%), Gaps = 5/124 (4%)
Query: 125 KSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNSGC 184
K ++ WR+ L+ E+FRI R+K TE P +G+Y E G Y C C TPL+KS KF++GC
Sbjct: 7 KDDDYWRSKLTDEEFRICREKGTEMPFSGKYVDTTEAGTYLCRCCNTPLFKSLAKFDAGC 66
Query: 185 GWPAFYEGLP-GAINCSPDPD--GLRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSI 241
GWP+F+E L G I D +R EI C ACG HLGHVF +G P PT R+CVNS
Sbjct: 67 GWPSFFEPLEKGVITEEMDTSLGMVRTEIMCEACGCHLGHVFT-DG-PQPTGLRYCVNSA 124
Query: 242 SLKF 245
S++F
Sbjct: 125 SIQF 128
>sp|C5CNS9|MSRB_VARPS Peptide methionine sulfoxide reductase MsrB OS=Variovorax paradoxus
(strain S110) GN=msrB PE=3 SV=1
Length = 136
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 86/131 (65%), Gaps = 10/131 (7%)
Query: 123 VNKSEEEWRAILS-----PEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKST 177
+ K++ EW+A+L+ P F + R ATE P TG+Y+ H+++G Y+C CG L++S+
Sbjct: 5 IEKTDAEWKALLAEKGAEPAAFEVTRHAATERPFTGKYEAHWDDGTYHCICCGAKLFESS 64
Query: 178 TKFNSGCGWPAF-YEGLPGAI-NCSPDPDGL-RIEITCAACGGHLGHVFKGEGFPTPTDE 234
TKF++GCGWP+F E +PGAI N G+ R E CA CG HLGHVF +G PT T
Sbjct: 65 TKFDAGCGWPSFSQEAVPGAIRNIVDRSHGMVRTENVCANCGAHLGHVFP-DG-PTETGL 122
Query: 235 RHCVNSISLKF 245
R+C+NS SL F
Sbjct: 123 RYCMNSASLDF 133
>sp|Q89EM9|MSRB_BRAJA Peptide methionine sulfoxide reductase MsrB OS=Bradyrhizobium
japonicum (strain USDA 110) GN=msrB PE=3 SV=1
Length = 139
Score = 117 bits (294), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 11/131 (8%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V KSEE+WR LSP Q+ +LR+KATE P +GEY+ G Y C+ CG L++S KF+S
Sbjct: 13 VIKSEEQWRRELSPIQYAVLREKATERPFSGEYEHDHRAGTYVCAGCGNVLFESDAKFDS 72
Query: 183 GCGWPAFYEGLPGAINCSPDPDG------LRIEITCAACGGHLGHVFKGEGFPTPTDERH 236
GCGWP+F + A+ D + +R E+ CA C GHLGHVF P PT R+
Sbjct: 73 GCGWPSFTQ---PAVESHVDEERDVSHGMIRTEVLCAKCSGHLGHVFP--DGPGPTGLRY 127
Query: 237 CVNSISLKFVP 247
C+NS +LK P
Sbjct: 128 CINSAALKLEP 138
>sp|Q4K8U5|MSRB_PSEF5 Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=msrB PE=3
SV=1
Length = 130
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 79/128 (61%), Gaps = 5/128 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ EEWR++L PEQ+ + R K TE P +G+Y+ +G+Y+C C PL+ S KF+S
Sbjct: 4 LEKTLEEWRSMLDPEQYNVCRLKGTERPFSGKYNGTKTDGVYHCICCNEPLFDSKAKFDS 63
Query: 183 GCGWPAFYEGLPGA--INCSPDPDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+FYE + + + G+ R E+ CA C HLGHVF P PT R+C+N
Sbjct: 64 GCGWPSFYEPIADSAMVEIRDMSHGMIRTEVVCAKCDAHLGHVFPDG--PPPTGLRYCIN 121
Query: 240 SISLKFVP 247
S+ L VP
Sbjct: 122 SVCLDLVP 129
>sp|A4G5V5|MSRB_HERAR Peptide methionine sulfoxide reductase MsrB OS=Herminiimonas
arsenicoxydans GN=msrB PE=3 SV=1
Length = 137
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 77/126 (61%), Gaps = 5/126 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V K++ EWRA+L E++ + R ATE P +G Y H E GIY C C TPL+ S KF+S
Sbjct: 5 VIKTDAEWRAMLDDEEYDVTRHAATEAPFSGRYWDHHEHGIYTCVCCNTPLFASDAKFDS 64
Query: 183 GCGWPAFYEGL-PGAINCSPDP--DGLRIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+++ L P + D +R E+ C C HLGHVF +G P PT R+C+N
Sbjct: 65 GCGWPSYFTALNPDNVKEKIDRAYGMIRTEVICNVCDAHLGHVFN-DG-PPPTGLRYCIN 122
Query: 240 SISLKF 245
S SL+F
Sbjct: 123 SASLRF 128
>sp|A5W756|MSRB_PSEP1 Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=msrB PE=3 SV=1
Length = 131
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 5/130 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ +EWR++L PEQ+++ R K TE P +G+Y+ +GIY+C CG L+ + TKF++
Sbjct: 4 IEKTLDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCGLALFDAQTKFDA 63
Query: 183 GCGWPAFYEGLPGA--INCSPDPDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+FY + + I G+ R E+TCA C HLGHVF P PT R+C+N
Sbjct: 64 GCGWPSFYAPIEDSAMIEIRDTSHGMIRTEVTCARCDAHLGHVFPDG--PPPTGLRYCIN 121
Query: 240 SISLKFVPAN 249
S+ + P +
Sbjct: 122 SVCIDLRPRD 131
>sp|B0BYW4|MSRB_ACAM1 Peptide methionine sulfoxide reductase MsrB OS=Acaryochloris marina
(strain MBIC 11017) GN=msrB PE=3 SV=1
Length = 131
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V K+E+EW A L+PEQFR+ R TE TGEY G Y C CGT L+ S TKF+S
Sbjct: 4 VQKTEQEWEAQLTPEQFRVTRHHGTERAFTGEYHDLKAAGTYQCVCCGTELFTSDTKFDS 63
Query: 183 GCGWPAFYEGLPGAINCSPDPDG----LRIEITCAACGGHLGHVFKGEGFPTPTDERHCV 238
G GWP+F+ + D +R E+ CA C HLGHVF +G P PT R+C+
Sbjct: 64 GTGWPSFW-APADKTHVEEKTDRSLFMVRTEVLCAVCDAHLGHVF-NDG-PKPTGLRYCM 120
Query: 239 NSISLKFVP 247
NS +LKFVP
Sbjct: 121 NSAALKFVP 129
>sp|Q885Q1|MSRB_PSESM Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas syringae
pv. tomato (strain DC3000) GN=msrB PE=3 SV=1
Length = 131
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 78/128 (60%), Gaps = 5/128 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ EEW+ +L P Q+ + R K TE P +G+Y+ G+Y+C C L+ STTKF+S
Sbjct: 4 LQKTLEEWKEMLDPAQYSVCRLKGTERPFSGKYNDTKTAGVYHCICCNEALFDSTTKFDS 63
Query: 183 GCGWPAFYEGLPGA--INCSPDPDGL-RIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+FY L G+ + G+ R E+ CA C HLGHVF P PT R+C+N
Sbjct: 64 GCGWPSFYAPLEGSAVVEVRDVSHGMIRTEVVCARCDAHLGHVFPDG--PPPTGLRYCIN 121
Query: 240 SISLKFVP 247
S+ L+ VP
Sbjct: 122 SVCLELVP 129
>sp|A1VNB7|MSRB_POLNA Peptide methionine sulfoxide reductase MsrB OS=Polaromonas
naphthalenivorans (strain CJ2) GN=msrB PE=3 SV=1
Length = 136
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 10/135 (7%)
Query: 121 ASVNKSEEEWRAILS-----PEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYK 175
A + K++ EW+A+L+ P F + R ATE P TG+Y+ ++ EG Y C C L+
Sbjct: 3 AKIQKTDAEWKALLTEKGAEPVAFNVTRHAATERPFTGKYEDNYAEGTYRCICCDAELFD 62
Query: 176 STTKFNSGCGWPAFYEGL-PGAINCSPD-PDGL-RIEITCAACGGHLGHVFKGEGFPTPT 232
S+TKF++GCGWP+F + + GAI D G+ R E CA CG HLGHVF +G PTPT
Sbjct: 63 SSTKFDAGCGWPSFSQEVKEGAIEEHVDKAHGMTRTETVCANCGAHLGHVFP-DG-PTPT 120
Query: 233 DERHCVNSISLKFVP 247
R+C+NS SL F P
Sbjct: 121 GLRYCMNSASLDFKP 135
>sp|Q47EU6|MSRB_DECAR Peptide methionine sulfoxide reductase MsrB OS=Dechloromonas
aromatica (strain RCB) GN=msrB PE=3 SV=1
Length = 132
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 77/126 (61%), Gaps = 5/126 (3%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K++ EWRA L ++R+ RQK TE TG+Y ++G Y C CG PL++S TKF+S
Sbjct: 4 IEKTDAEWRAQLDENEYRVTRQKGTERAFTGKYWDTHDDGTYRCICCGAPLFRSETKFDS 63
Query: 183 GCGWPAFYE-GLPGAINCSPDPD--GLRIEITCAACGGHLGHVFKGEGFPTPTDERHCVN 239
GCGWP+F+ I+ D +R E+TC CG HLGHVF + P PT R+C+N
Sbjct: 64 GCGWPSFHTPNDEKLIDEHVDQSFGMIRTEVTCHDCGAHLGHVF--DDGPAPTGLRYCIN 121
Query: 240 SISLKF 245
S SLK
Sbjct: 122 SASLKL 127
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,500,286
Number of Sequences: 539616
Number of extensions: 4302312
Number of successful extensions: 10095
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 9409
Number of HSP's gapped (non-prelim): 259
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)