Query 025344
Match_columns 254
No_of_seqs 101 out of 174
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 08:27:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025344.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025344hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qwg_A PSL synthase;, (2R)-pho 100.0 8.3E-83 2.8E-87 573.3 23.7 209 19-254 8-223 (251)
2 1u83_A Phosphosulfolactate syn 100.0 9E-82 3.1E-86 572.2 19.5 217 8-254 23-247 (276)
3 1ydn_A Hydroxymethylglutaryl-C 96.4 0.021 7E-07 51.0 10.2 160 41-231 83-263 (295)
4 3f4w_A Putative hexulose 6 pho 96.3 0.056 1.9E-06 45.1 11.9 143 39-228 11-157 (211)
5 3lmz_A Putative sugar isomeras 96.2 0.084 2.9E-06 44.9 13.1 78 102-206 31-110 (257)
6 3p6l_A Sugar phosphate isomera 96.0 0.11 3.7E-06 44.1 12.4 78 102-206 23-112 (262)
7 1olt_A Oxygen-independent copr 95.8 0.13 4.6E-06 48.5 13.6 123 54-205 105-240 (457)
8 2ftp_A Hydroxymethylglutaryl-C 95.8 0.056 1.9E-06 48.6 10.2 158 41-231 87-267 (302)
9 2q02_A Putative cytoplasmic pr 95.7 0.31 1.1E-05 41.1 14.1 129 102-254 20-165 (272)
10 1yx1_A Hypothetical protein PA 95.5 0.099 3.4E-06 44.6 10.2 121 102-250 24-151 (264)
11 2cw6_A Hydroxymethylglutaryl-C 95.4 0.16 5.5E-06 45.4 11.9 159 40-231 83-264 (298)
12 3ble_A Citramalate synthase fr 95.4 0.083 2.8E-06 48.5 10.1 156 41-228 100-268 (337)
13 3l5l_A Xenobiotic reductase A; 95.3 0.016 5.6E-07 53.6 5.0 140 70-251 209-363 (363)
14 1tv8_A MOAA, molybdenum cofact 95.3 0.31 1.1E-05 43.5 13.2 129 39-206 51-196 (340)
15 1rqb_A Transcarboxylase 5S sub 95.2 0.32 1.1E-05 47.8 14.0 95 103-228 119-213 (539)
16 3bw2_A 2-nitropropane dioxygen 95.1 0.24 8E-06 45.5 12.3 65 102-207 110-174 (369)
17 3qja_A IGPS, indole-3-glycerol 94.9 0.22 7.6E-06 44.5 11.1 113 102-253 122-237 (272)
18 2nx9_A Oxaloacetate decarboxyl 94.9 0.24 8.2E-06 47.7 11.9 95 103-228 102-196 (464)
19 3cqj_A L-ribulose-5-phosphate 94.7 0.28 9.7E-06 42.2 11.0 134 102-252 31-188 (295)
20 3ktc_A Xylose isomerase; putat 94.7 0.65 2.2E-05 41.2 13.6 70 56-148 7-79 (333)
21 2ftp_A Hydroxymethylglutaryl-C 94.5 0.24 8.3E-06 44.4 10.4 100 104-228 86-197 (302)
22 3qc0_A Sugar isomerase; TIM ba 94.4 0.088 3E-06 44.5 6.9 131 102-253 19-171 (275)
23 3ewb_X 2-isopropylmalate synth 94.4 0.15 5.2E-06 45.9 8.8 142 54-226 94-250 (293)
24 1i4n_A Indole-3-glycerol phosp 94.4 0.21 7.3E-06 44.4 9.6 102 107-247 116-220 (251)
25 3iix_A Biotin synthetase, puta 94.4 0.54 1.8E-05 41.8 12.3 131 39-204 85-227 (348)
26 1f76_A Dihydroorotate dehydrog 94.3 0.56 1.9E-05 42.2 12.5 78 41-126 153-250 (336)
27 1ydo_A HMG-COA lyase; TIM-barr 94.3 0.19 6.6E-06 45.5 9.3 156 41-231 85-265 (307)
28 1ep3_A Dihydroorotate dehydrog 94.2 0.5 1.7E-05 41.5 11.7 74 40-123 110-198 (311)
29 3p6l_A Sugar phosphate isomera 94.1 0.21 7.1E-06 42.3 8.7 102 42-152 23-137 (262)
30 1qtw_A Endonuclease IV; DNA re 94.1 0.27 9.3E-06 41.7 9.4 92 102-207 13-111 (285)
31 3aal_A Probable endonuclease 4 94.1 0.57 1.9E-05 40.7 11.6 132 102-251 19-173 (303)
32 1ydn_A Hydroxymethylglutaryl-C 94.0 0.28 9.5E-06 43.6 9.6 99 105-228 83-193 (295)
33 3q58_A N-acetylmannosamine-6-p 93.9 0.21 7.4E-06 43.3 8.4 85 107-227 94-180 (229)
34 1pii_A N-(5'phosphoribosyl)ant 93.8 0.33 1.1E-05 46.7 10.4 93 107-238 123-216 (452)
35 3vni_A Xylose isomerase domain 93.8 0.27 9.1E-06 42.2 8.8 89 102-204 18-107 (294)
36 1r30_A Biotin synthase; SAM ra 93.7 0.82 2.8E-05 41.5 12.4 129 39-204 100-244 (369)
37 3tsm_A IGPS, indole-3-glycerol 93.7 1.1 3.6E-05 40.3 12.8 108 107-253 135-244 (272)
38 2nx9_A Oxaloacetate decarboxyl 93.6 1 3.5E-05 43.3 13.4 149 44-231 103-259 (464)
39 3tha_A Tryptophan synthase alp 93.6 1.1 3.8E-05 39.8 12.7 105 39-150 26-148 (252)
40 4a29_A Engineered retro-aldol 93.5 1.4 4.9E-05 39.5 13.3 112 103-253 114-228 (258)
41 1nvm_A HOA, 4-hydroxy-2-oxoval 93.5 0.82 2.8E-05 41.7 12.1 165 26-230 85-251 (345)
42 3obe_A Sugar phosphate isomera 93.3 0.35 1.2E-05 42.7 8.8 87 102-205 37-134 (305)
43 3igs_A N-acetylmannosamine-6-p 93.3 0.34 1.1E-05 42.1 8.6 85 107-227 94-180 (232)
44 2z6i_A Trans-2-enoyl-ACP reduc 93.2 0.32 1.1E-05 44.0 8.8 132 42-229 27-162 (332)
45 3zwt_A Dihydroorotate dehydrog 93.2 1.4 4.9E-05 40.9 13.3 77 42-127 162-260 (367)
46 1rvg_A Fructose-1,6-bisphospha 93.1 2.7 9.1E-05 38.5 14.6 185 40-253 27-227 (305)
47 2p10_A MLL9387 protein; putati 93.0 0.64 2.2E-05 42.4 10.3 113 102-250 109-249 (286)
48 2x7v_A Probable endonuclease 4 92.8 0.44 1.5E-05 40.4 8.5 133 102-251 13-168 (287)
49 3bo9_A Putative nitroalkan dio 92.7 3 0.0001 37.6 14.4 133 41-228 40-175 (326)
50 2qul_A D-tagatose 3-epimerase; 92.7 0.55 1.9E-05 39.9 9.1 89 102-204 18-107 (290)
51 3aam_A Endonuclease IV, endoiv 92.4 0.54 1.8E-05 39.9 8.7 116 102-238 15-141 (270)
52 3eeg_A 2-isopropylmalate synth 92.4 0.31 1E-05 44.6 7.5 125 71-226 123-251 (325)
53 2cw6_A Hydroxymethylglutaryl-C 92.4 0.55 1.9E-05 41.9 9.0 144 46-228 35-194 (298)
54 3gr7_A NADPH dehydrogenase; fl 92.4 0.21 7.1E-06 45.8 6.3 122 70-231 195-327 (340)
55 1i60_A IOLI protein; beta barr 92.3 0.27 9.1E-06 41.5 6.5 87 102-205 15-104 (278)
56 3ngf_A AP endonuclease, family 92.3 1 3.5E-05 38.3 10.2 133 102-252 24-177 (269)
57 3tva_A Xylose isomerase domain 92.3 0.23 8E-06 42.6 6.2 134 102-251 22-175 (290)
58 3nav_A Tryptophan synthase alp 92.1 1.1 3.7E-05 40.1 10.5 104 40-150 33-157 (271)
59 2ekc_A AQ_1548, tryptophan syn 92.0 1.7 5.7E-05 38.1 11.5 112 26-148 20-152 (262)
60 3igs_A N-acetylmannosamine-6-p 91.9 1.1 3.6E-05 38.9 10.0 120 41-211 92-215 (232)
61 3vnd_A TSA, tryptophan synthas 91.9 1.9 6.5E-05 38.4 11.9 103 41-150 32-155 (267)
62 3ivs_A Homocitrate synthase, m 91.9 1 3.4E-05 42.9 10.6 146 41-222 114-272 (423)
63 3dx5_A Uncharacterized protein 91.8 0.27 9.1E-06 42.0 5.9 18 103-120 17-34 (286)
64 2gjl_A Hypothetical protein PA 91.8 1.3 4.5E-05 39.7 10.7 138 42-228 30-171 (328)
65 3kws_A Putative sugar isomeras 91.5 0.93 3.2E-05 38.8 9.2 131 102-251 39-189 (287)
66 1z41_A YQJM, probable NADH-dep 91.4 0.16 5.4E-06 46.3 4.3 120 70-229 195-325 (338)
67 3b8i_A PA4872 oxaloacetate dec 91.3 2 6.8E-05 38.9 11.4 102 105-237 101-212 (287)
68 3f4w_A Putative hexulose 6 pho 91.3 0.53 1.8E-05 39.1 7.1 124 40-213 66-194 (211)
69 2hk0_A D-psicose 3-epimerase; 91.2 0.62 2.1E-05 40.5 7.8 135 102-252 38-195 (309)
70 3cny_A Inositol catabolism pro 91.2 0.34 1.2E-05 41.5 6.0 125 102-252 32-182 (301)
71 1z41_A YQJM, probable NADH-dep 91.1 2.8 9.7E-05 37.9 12.4 105 103-228 146-276 (338)
72 2qw5_A Xylose isomerase-like T 91.1 1.1 3.7E-05 39.5 9.4 87 105-205 35-129 (335)
73 3vav_A 3-methyl-2-oxobutanoate 91.1 0.75 2.6E-05 41.6 8.4 79 110-206 116-194 (275)
74 1jub_A Dihydroorotate dehydrog 91.1 2.1 7.3E-05 37.7 11.4 49 68-124 142-195 (311)
75 3lmz_A Putative sugar isomeras 91.0 0.56 1.9E-05 39.7 7.1 100 43-151 32-134 (257)
76 3t7v_A Methylornithine synthas 91.0 3.1 0.00011 37.2 12.4 130 39-205 92-237 (350)
77 1oy0_A Ketopantoate hydroxymet 90.9 0.51 1.7E-05 42.8 7.0 97 106-229 118-214 (281)
78 2czd_A Orotidine 5'-phosphate 90.8 0.94 3.2E-05 38.0 8.3 48 76-123 93-141 (208)
79 1ydo_A HMG-COA lyase; TIM-barr 90.7 0.97 3.3E-05 40.9 8.7 97 107-228 87-195 (307)
80 1o66_A 3-methyl-2-oxobutanoate 90.6 0.93 3.2E-05 41.0 8.5 90 113-229 107-196 (275)
81 1rqb_A Transcarboxylase 5S sub 90.6 1.3 4.3E-05 43.6 10.0 146 50-229 127-276 (539)
82 3rmj_A 2-isopropylmalate synth 90.5 0.84 2.9E-05 42.5 8.4 141 54-225 101-256 (370)
83 3u0h_A Xylose isomerase domain 90.4 0.25 8.6E-06 41.8 4.4 85 102-204 17-103 (281)
84 1nvm_A HOA, 4-hydroxy-2-oxoval 90.3 1.3 4.3E-05 40.5 9.2 93 103-228 95-187 (345)
85 3tak_A DHDPS, dihydrodipicolin 90.1 2.1 7.3E-05 38.0 10.4 76 102-206 23-104 (291)
86 2zvr_A Uncharacterized protein 90.1 0.92 3.1E-05 39.0 7.8 133 102-252 42-194 (290)
87 3ewb_X 2-isopropylmalate synth 90.0 1.3 4.3E-05 39.8 8.9 143 43-227 32-187 (293)
88 1fob_A Beta-1,4-galactanase; B 89.9 1.2 4.2E-05 40.3 8.8 54 104-159 30-89 (334)
89 3b4u_A Dihydrodipicolinate syn 89.9 1.7 5.7E-05 38.9 9.6 110 102-238 25-142 (294)
90 2r91_A 2-keto-3-deoxy-(6-phosp 89.8 1.8 6E-05 38.5 9.6 108 102-238 20-131 (286)
91 3l5l_A Xenobiotic reductase A; 89.8 1.4 4.9E-05 40.5 9.2 87 102-208 159-269 (363)
92 3ih1_A Methylisocitrate lyase; 89.7 1.7 5.7E-05 39.7 9.5 96 103-230 106-212 (305)
93 3si9_A DHDPS, dihydrodipicolin 89.7 2.6 8.9E-05 38.1 10.8 123 102-253 44-202 (315)
94 3n9r_A Fructose-bisphosphate a 89.6 7.8 0.00027 35.4 13.9 183 39-253 26-229 (307)
95 3dz1_A Dihydrodipicolinate syn 89.6 1.3 4.5E-05 39.9 8.7 77 102-205 30-109 (313)
96 3m5v_A DHDPS, dihydrodipicolin 89.5 2.7 9.4E-05 37.5 10.7 77 102-207 29-112 (301)
97 1gte_A Dihydropyrimidine dehyd 89.5 2.2 7.5E-05 44.3 11.3 78 40-124 647-738 (1025)
98 2h6r_A Triosephosphate isomera 89.3 1.9 6.6E-05 36.8 9.1 46 107-152 75-120 (219)
99 3qze_A DHDPS, dihydrodipicolin 89.2 2.8 9.6E-05 37.9 10.6 120 102-253 45-202 (314)
100 3eb2_A Putative dihydrodipicol 89.2 2.7 9.3E-05 37.6 10.4 75 102-206 26-107 (300)
101 3l23_A Sugar phosphate isomera 89.2 1.5 5E-05 38.5 8.5 97 102-206 30-129 (303)
102 1xg4_A Probable methylisocitra 88.9 2.1 7.3E-05 38.7 9.6 92 108-229 101-203 (295)
103 3l21_A DHDPS, dihydrodipicolin 88.8 3.1 0.00011 37.3 10.6 77 102-207 37-119 (304)
104 3b0p_A TRNA-dihydrouridine syn 88.8 1.4 4.7E-05 40.4 8.3 104 101-228 70-195 (350)
105 3b0p_A TRNA-dihydrouridine syn 88.8 1.4 4.8E-05 40.3 8.3 76 61-142 103-194 (350)
106 1k77_A EC1530, hypothetical pr 88.7 1 3.5E-05 37.7 6.9 88 102-206 16-106 (260)
107 3eoo_A Methylisocitrate lyase; 88.6 1.8 6.1E-05 39.4 8.8 97 103-229 100-207 (298)
108 3s5o_A 4-hydroxy-2-oxoglutarat 88.6 1.8 6E-05 39.0 8.8 76 102-206 36-117 (307)
109 1hjs_A Beta-1,4-galactanase; 4 88.6 0.87 3E-05 41.4 6.8 69 79-159 15-89 (332)
110 3ipw_A Hydrolase TATD family p 88.5 12 0.0004 34.1 14.4 168 22-240 62-249 (325)
111 2hjp_A Phosphonopyruvate hydro 88.5 2.7 9.2E-05 38.0 9.9 97 105-229 94-203 (290)
112 3c8f_A Pyruvate formate-lyase 88.5 7.7 0.00026 31.7 12.1 102 40-152 52-169 (245)
113 3bg3_A Pyruvate carboxylase, m 88.5 4.8 0.00017 40.7 12.7 147 52-230 209-362 (718)
114 2nuw_A 2-keto-3-deoxygluconate 88.4 1.8 6.2E-05 38.5 8.6 108 102-238 21-132 (288)
115 3m47_A Orotidine 5'-phosphate 88.3 2 6.7E-05 37.1 8.6 95 39-145 23-119 (228)
116 3hgj_A Chromate reductase; TIM 88.2 0.42 1.4E-05 43.7 4.5 121 71-231 204-338 (349)
117 3a5f_A Dihydrodipicolinate syn 88.2 3 0.0001 37.1 9.9 119 102-252 23-179 (291)
118 1m3u_A 3-methyl-2-oxobutanoate 88.2 1.5 5.3E-05 39.3 8.0 91 113-229 106-196 (264)
119 1f6k_A N-acetylneuraminate lya 88.1 2.2 7.6E-05 37.9 9.1 76 102-206 25-107 (293)
120 2wkj_A N-acetylneuraminate lya 88.1 2.4 8.2E-05 38.0 9.3 76 102-206 33-114 (303)
121 3flu_A DHDPS, dihydrodipicolin 88.1 4.8 0.00016 35.9 11.2 76 102-206 29-110 (297)
122 1vhn_A Putative flavin oxidore 88.0 1.4 4.8E-05 39.5 7.7 79 40-125 70-164 (318)
123 2ehh_A DHDPS, dihydrodipicolin 88.0 5.8 0.0002 35.2 11.7 121 102-253 22-180 (294)
124 1w3i_A EDA, 2-keto-3-deoxy glu 88.0 3.6 0.00012 36.6 10.3 108 102-238 21-132 (293)
125 1tv5_A Dhodehase, dihydroorota 88.0 7.7 0.00026 37.0 13.2 25 102-126 312-336 (443)
126 3hgj_A Chromate reductase; TIM 88.0 5.1 0.00018 36.5 11.6 83 103-206 154-260 (349)
127 3na8_A Putative dihydrodipicol 87.9 2.1 7.2E-05 38.7 8.9 76 102-206 46-127 (315)
128 2g0w_A LMO2234 protein; putati 87.9 1 3.5E-05 39.0 6.6 47 102-148 37-86 (296)
129 3gr7_A NADPH dehydrogenase; fl 87.6 5 0.00017 36.6 11.2 83 103-206 146-250 (340)
130 2zds_A Putative DNA-binding pr 87.5 0.69 2.4E-05 40.3 5.3 47 102-148 16-69 (340)
131 2yxg_A DHDPS, dihydrodipicolin 87.5 3.4 0.00011 36.7 9.8 76 102-206 22-103 (289)
132 2ztj_A Homocitrate synthase; ( 87.5 10 0.00034 35.1 13.4 142 43-228 30-182 (382)
133 2rfg_A Dihydrodipicolinate syn 87.4 3 0.0001 37.2 9.5 76 102-206 22-103 (297)
134 1xky_A Dihydrodipicolinate syn 87.4 5.5 0.00019 35.6 11.2 76 102-206 34-115 (301)
135 3kws_A Putative sugar isomeras 87.3 6.7 0.00023 33.3 11.3 106 42-151 39-167 (287)
136 1jub_A Dihydroorotate dehydrog 87.0 2.1 7.3E-05 37.8 8.2 79 102-207 107-194 (311)
137 2v9d_A YAGE; dihydrodipicolini 86.9 4.4 0.00015 37.1 10.5 76 102-206 53-134 (343)
138 3q58_A N-acetylmannosamine-6-p 86.9 3 0.0001 36.0 8.9 120 41-211 92-215 (229)
139 1o5k_A DHDPS, dihydrodipicolin 86.8 4.6 0.00016 36.2 10.4 76 102-206 34-115 (306)
140 2vc6_A MOSA, dihydrodipicolina 86.7 4.4 0.00015 35.9 10.1 121 102-253 22-180 (292)
141 2ojp_A DHDPS, dihydrodipicolin 86.7 3 0.0001 37.1 9.0 76 102-206 23-104 (292)
142 3cpr_A Dihydrodipicolinate syn 86.7 3.7 0.00013 36.8 9.7 76 102-206 38-119 (304)
143 3qja_A IGPS, indole-3-glycerol 86.7 2.2 7.6E-05 37.9 8.1 112 68-227 147-261 (272)
144 4e38_A Keto-hydroxyglutarate-a 86.6 1.2 4E-05 39.2 6.1 99 62-205 14-113 (232)
145 2qiw_A PEP phosphonomutase; st 86.5 4.4 0.00015 35.8 10.0 95 112-234 104-210 (255)
146 1y0e_A Putative N-acetylmannos 86.4 2.9 9.9E-05 34.8 8.4 91 104-229 78-175 (223)
147 3rcm_A TATD family hydrolase; 86.4 10 0.00035 33.6 12.3 170 22-240 27-211 (287)
148 3qxb_A Putative xylose isomera 86.3 2.6 8.9E-05 36.7 8.3 135 102-250 36-200 (316)
149 3tva_A Xylose isomerase domain 86.2 0.76 2.6E-05 39.3 4.7 109 42-152 25-161 (290)
150 3ivs_A Homocitrate synthase, m 86.2 2.9 0.0001 39.7 9.1 139 43-228 66-218 (423)
151 3ble_A Citramalate synthase fr 86.2 2 6.9E-05 39.1 7.8 142 46-228 50-207 (337)
152 3jr2_A Hexulose-6-phosphate sy 85.9 4.5 0.00015 34.0 9.4 93 39-146 17-112 (218)
153 3d0c_A Dihydrodipicolinate syn 85.9 3 0.0001 37.7 8.7 137 82-252 13-185 (314)
154 2isw_A Putative fructose-1,6-b 85.9 14 0.00048 34.0 13.2 128 105-253 89-229 (323)
155 2r8w_A AGR_C_1641P; APC7498, d 85.8 3.2 0.00011 37.8 8.9 76 102-206 56-137 (332)
156 2j6v_A UV endonuclease, UVDE; 85.7 3.9 0.00013 36.6 9.3 122 97-238 57-198 (301)
157 2qjg_A Putative aldolase MJ040 85.6 2.6 8.9E-05 36.3 7.9 144 40-226 102-255 (273)
158 4e38_A Keto-hydroxyglutarate-a 85.5 0.74 2.5E-05 40.5 4.3 98 72-225 116-223 (232)
159 2e6f_A Dihydroorotate dehydrog 85.5 3.9 0.00013 36.1 9.1 62 56-124 125-198 (314)
160 3e96_A Dihydrodipicolinate syn 85.3 2.3 7.7E-05 38.4 7.5 117 102-251 34-184 (316)
161 3daq_A DHDPS, dihydrodipicolin 85.2 4.9 0.00017 35.7 9.7 77 101-206 23-105 (292)
162 1gvf_A Tagatose-bisphosphate a 85.2 21 0.00072 32.1 14.6 164 40-230 28-203 (286)
163 3qfe_A Putative dihydrodipicol 85.2 6.6 0.00023 35.4 10.6 109 102-239 33-149 (318)
164 3bg3_A Pyruvate carboxylase, m 85.1 5.6 0.00019 40.3 11.0 101 103-228 199-299 (718)
165 1zzm_A Putative deoxyribonucle 85.0 13 0.00046 31.0 12.0 168 22-240 29-209 (259)
166 2hmc_A AGR_L_411P, dihydrodipi 85.0 3.4 0.00012 38.0 8.7 108 102-238 48-160 (344)
167 1wa3_A 2-keto-3-deoxy-6-phosph 84.7 5.2 0.00018 32.8 9.0 110 39-211 72-183 (205)
168 1ur4_A Galactanase; hydrolase, 84.5 5.4 0.00019 37.4 10.0 90 104-206 51-162 (399)
169 1xim_A D-xylose isomerase; iso 84.2 5.1 0.00018 36.5 9.6 50 99-148 31-87 (393)
170 3fkr_A L-2-keto-3-deoxyarabona 84.1 3.9 0.00013 36.8 8.6 78 102-206 30-111 (309)
171 2a5h_A L-lysine 2,3-aminomutas 84.0 14 0.00049 34.3 12.7 139 39-206 146-291 (416)
172 3m6y_A 4-hydroxy-2-oxoglutarat 83.7 5 0.00017 36.1 8.8 100 38-150 122-243 (275)
173 3i65_A Dihydroorotate dehydrog 83.4 15 0.00052 34.8 12.6 75 43-125 198-307 (415)
174 3ajx_A 3-hexulose-6-phosphate 83.4 2.9 0.0001 34.3 6.9 94 39-145 11-105 (207)
175 4dpp_A DHDPS 2, dihydrodipicol 83.3 6 0.0002 36.8 9.7 99 79-206 58-162 (360)
176 1vyr_A Pentaerythritol tetrani 83.2 11 0.00036 34.7 11.2 46 183-229 249-294 (364)
177 3h5d_A DHDPS, dihydrodipicolin 83.0 12 0.00042 33.6 11.4 79 101-206 28-111 (311)
178 1q6o_A Humps, 3-keto-L-gulonat 82.9 2.3 7.9E-05 35.7 6.2 79 39-121 14-114 (216)
179 2ztj_A Homocitrate synthase; ( 82.8 16 0.00054 33.8 12.3 147 43-222 80-238 (382)
180 2gou_A Oxidoreductase, FMN-bin 82.7 13 0.00045 34.1 11.7 46 183-229 248-293 (365)
181 1qop_A Tryptophan synthase alp 82.7 23 0.00079 30.7 14.1 101 41-148 31-152 (268)
182 3m0z_A Putative aldolase; MCSG 82.7 5.4 0.00019 35.5 8.6 40 187-226 201-242 (249)
183 3r2g_A Inosine 5'-monophosphat 82.6 4.2 0.00015 37.8 8.3 65 102-204 100-168 (361)
184 2yx0_A Radical SAM enzyme; pre 82.5 12 0.0004 33.2 11.0 85 54-152 142-245 (342)
185 2qf7_A Pyruvate carboxylase pr 82.4 7.7 0.00026 41.2 11.1 102 102-228 646-747 (1165)
186 1f76_A Dihydroorotate dehydrog 82.0 9.9 0.00034 33.9 10.3 80 103-208 152-248 (336)
187 2qjg_A Putative aldolase MJ040 81.9 5.4 0.00018 34.3 8.3 94 105-229 103-202 (273)
188 3lye_A Oxaloacetate acetyl hyd 81.7 3.7 0.00013 37.5 7.4 95 103-229 105-214 (307)
189 2vtf_A Endo-beta-N-acetylgluco 81.7 3.4 0.00012 41.3 7.7 89 51-143 89-201 (626)
190 1xla_A D-xylose isomerase; iso 81.7 3.8 0.00013 37.5 7.6 92 102-206 34-137 (394)
191 3q94_A Fructose-bisphosphate a 81.6 28 0.00095 31.4 13.1 162 39-230 30-207 (288)
192 4fo4_A Inosine 5'-monophosphat 81.5 11 0.00036 35.0 10.6 91 67-204 79-176 (366)
193 3vk5_A MOEO5; TIM barrel, tran 81.5 3 0.0001 37.9 6.7 161 23-229 38-276 (286)
194 3gg7_A Uncharacterized metallo 81.3 23 0.0008 30.8 12.3 165 22-240 24-198 (254)
195 3fa4_A 2,3-dimethylmalate lyas 80.8 3.2 0.00011 37.9 6.6 99 103-229 97-206 (302)
196 1yxy_A Putative N-acetylmannos 80.5 4.1 0.00014 34.2 6.9 39 104-142 91-130 (234)
197 1tv5_A Dhodehase, dihydroorota 80.4 9.3 0.00032 36.4 10.0 27 183-209 309-335 (443)
198 3rmj_A 2-isopropylmalate synth 80.3 4.7 0.00016 37.4 7.7 95 102-227 88-194 (370)
199 2z1k_A (NEO)pullulanase; hydro 80.1 1.8 6.2E-05 40.3 4.9 46 107-152 56-119 (475)
200 2ze3_A DFA0005; organic waste 80.1 23 0.0008 31.5 12.0 97 108-229 99-204 (275)
201 1ujp_A Tryptophan synthase alp 80.1 31 0.0011 30.4 14.0 101 41-148 30-149 (271)
202 2qf7_A Pyruvate carboxylase pr 80.0 27 0.00093 37.1 14.3 146 53-230 658-809 (1165)
203 1s2w_A Phosphoenolpyruvate pho 80.0 11 0.00039 33.9 10.0 95 107-229 100-207 (295)
204 1ep3_A Dihydroorotate dehydrog 79.9 1.7 5.7E-05 38.1 4.4 75 102-206 112-197 (311)
205 3cqj_A L-ribulose-5-phosphate 79.9 6.3 0.00021 33.6 8.0 110 42-151 31-168 (295)
206 1hg3_A Triosephosphate isomera 79.8 29 0.001 30.0 12.5 46 107-152 81-126 (225)
207 1y0e_A Putative N-acetylmannos 79.8 19 0.00065 29.7 10.8 121 41-211 79-209 (223)
208 3kru_A NADH:flavin oxidoreduct 79.6 2.2 7.6E-05 39.2 5.3 106 68-209 192-310 (343)
209 4gqr_A Pancreatic alpha-amylas 79.6 1.8 6E-05 39.6 4.6 49 104-152 26-99 (496)
210 3vni_A Xylose isomerase domain 79.5 7.7 0.00026 32.9 8.4 110 42-151 18-153 (294)
211 3ayv_A Putative uncharacterize 79.5 11 0.00037 31.4 9.2 131 102-254 11-157 (254)
212 1xwy_A DNAse TATD, deoxyribonu 79.4 26 0.0009 29.2 11.8 169 22-240 29-209 (264)
213 1vc4_A Indole-3-glycerol phosp 79.4 3.4 0.00012 36.2 6.2 83 107-229 121-203 (254)
214 1zco_A 2-dehydro-3-deoxyphosph 79.3 4 0.00014 36.1 6.7 40 189-228 211-255 (262)
215 3ctl_A D-allulose-6-phosphate 78.9 5.3 0.00018 34.6 7.2 131 42-225 72-214 (231)
216 1eep_A Inosine 5'-monophosphat 78.9 6.6 0.00023 36.2 8.3 67 102-204 153-221 (404)
217 1muw_A Xylose isomerase; atomi 78.8 4.6 0.00016 36.7 7.1 47 102-148 34-87 (386)
218 3zwt_A Dihydroorotate dehydrog 78.8 11 0.00038 34.8 9.7 82 102-207 162-256 (367)
219 3m6y_A 4-hydroxy-2-oxoglutarat 78.5 16 0.00054 32.9 10.1 66 42-118 172-239 (275)
220 2r14_A Morphinone reductase; H 78.4 7.3 0.00025 36.1 8.4 25 183-207 253-277 (377)
221 3guw_A Uncharacterized protein 78.4 10 0.00034 33.2 8.9 176 22-241 21-210 (261)
222 3tfx_A Orotidine 5'-phosphate 78.3 4.2 0.00014 36.2 6.4 88 105-228 148-236 (259)
223 1ka9_F Imidazole glycerol phos 78.2 11 0.00038 31.6 9.0 95 102-234 32-127 (252)
224 3d3a_A Beta-galactosidase; pro 78.1 2.3 7.7E-05 42.3 5.1 52 100-151 36-97 (612)
225 1jcn_A Inosine monophosphate d 78.1 7.3 0.00025 37.1 8.5 65 102-204 255-323 (514)
226 3tsm_A IGPS, indole-3-glycerol 78.0 13 0.00043 33.2 9.6 35 188-225 232-266 (272)
227 1h5y_A HISF; histidine biosynt 77.9 7.2 0.00025 32.3 7.6 41 101-141 33-74 (253)
228 3lab_A Putative KDPG (2-keto-3 77.8 8.4 0.00029 33.5 8.1 68 102-206 26-93 (217)
229 3eeg_A 2-isopropylmalate synth 77.8 12 0.0004 34.0 9.4 95 103-228 83-189 (325)
230 1wa3_A 2-keto-3-deoxy-6-phosph 77.7 6.4 0.00022 32.2 7.1 86 39-148 20-109 (205)
231 1f6y_A 5-methyltetrahydrofolat 77.6 12 0.0004 33.0 9.2 101 42-145 30-153 (262)
232 1j0h_A Neopullulanase; beta-al 77.6 2.3 7.9E-05 41.2 4.9 46 107-152 182-245 (588)
233 3sz8_A 2-dehydro-3-deoxyphosph 77.5 4.6 0.00016 36.5 6.6 147 50-228 107-269 (285)
234 1zlp_A PSR132, petal death pro 77.5 5.5 0.00019 36.5 7.2 95 105-229 120-225 (318)
235 1lwj_A 4-alpha-glucanotransfer 77.5 3.1 0.00011 38.4 5.6 131 107-239 29-219 (441)
236 2qr6_A IMP dehydrogenase/GMP r 77.4 12 0.00041 34.3 9.6 21 188-209 222-242 (393)
237 4aie_A Glucan 1,6-alpha-glucos 77.2 2.6 9E-05 39.4 5.1 47 107-153 38-103 (549)
238 2dh2_A 4F2 cell-surface antige 77.2 2.4 8.3E-05 39.4 4.8 120 105-240 40-177 (424)
239 3dhu_A Alpha-amylase; structur 77.0 2.6 9E-05 38.9 5.0 46 107-152 36-106 (449)
240 3t7v_A Methylornithine synthas 76.9 25 0.00086 31.2 11.3 96 41-145 126-232 (350)
241 3i65_A Dihydroorotate dehydrog 76.9 14 0.00048 35.0 10.0 84 102-209 197-307 (415)
242 1bxb_A Xylose isomerase; xylos 76.9 2.8 9.7E-05 38.2 5.1 47 102-148 34-87 (387)
243 3ru6_A Orotidine 5'-phosphate 76.7 9.6 0.00033 34.7 8.5 126 66-229 112-251 (303)
244 2e6f_A Dihydroorotate dehydrog 76.6 4.8 0.00017 35.5 6.4 78 102-207 107-197 (314)
245 2wc7_A Alpha amylase, catalyti 76.3 2.7 9.1E-05 39.4 4.9 46 107-152 62-125 (488)
246 1g94_A Alpha-amylase; beta-alp 76.3 3.1 0.00011 38.6 5.3 52 102-153 16-88 (448)
247 3hbl_A Pyruvate carboxylase; T 76.1 20 0.00069 38.0 11.9 102 103-228 629-730 (1150)
248 3kru_A NADH:flavin oxidoreduct 76.0 7.3 0.00025 35.7 7.6 21 183-204 228-248 (343)
249 3hbl_A Pyruvate carboxylase; T 76.0 21 0.00072 37.9 12.0 164 32-230 619-792 (1150)
250 1gcy_A Glucan 1,4-alpha-maltot 75.9 4.6 0.00016 38.5 6.5 127 106-238 42-221 (527)
251 3o1n_A 3-dehydroquinate dehydr 75.9 15 0.00053 32.6 9.5 103 70-204 83-195 (276)
252 1mzh_A Deoxyribose-phosphate a 75.8 4.7 0.00016 34.4 5.9 146 39-229 18-173 (225)
253 1ht6_A AMY1, alpha-amylase iso 75.8 2.8 9.7E-05 38.4 4.8 46 107-152 27-91 (405)
254 3m0z_A Putative aldolase; MCSG 75.5 19 0.00064 32.1 9.7 105 38-152 100-222 (249)
255 2yb1_A Amidohydrolase; HET: AM 75.5 2.7 9.3E-05 37.1 4.4 68 72-146 173-243 (292)
256 2hk0_A D-psicose 3-epimerase; 75.4 9.6 0.00033 32.8 7.9 109 42-151 38-172 (309)
257 1geq_A Tryptophan synthase alp 74.7 32 0.0011 28.8 10.9 69 73-148 69-138 (248)
258 1jvn_A Glutamine, bifunctional 74.7 6.3 0.00022 38.3 7.2 116 103-239 282-408 (555)
259 1thf_D HISF protein; thermophI 74.6 17 0.00057 30.6 9.1 94 102-233 31-125 (253)
260 1yxy_A Putative N-acetylmannos 74.5 36 0.0012 28.3 13.1 142 75-252 10-154 (234)
261 4aio_A Limit dextrinase; hydro 74.5 2.3 7.9E-05 42.4 4.1 24 130-153 379-402 (884)
262 1jcn_A Inosine monophosphate d 74.5 34 0.0012 32.4 12.1 114 42-206 259-388 (514)
263 3pm6_A Putative fructose-bisph 74.3 18 0.0006 33.1 9.6 168 39-229 36-219 (306)
264 3ldv_A Orotidine 5'-phosphate 74.2 16 0.00056 32.2 9.2 77 26-144 30-106 (255)
265 1vr6_A Phospho-2-dehydro-3-deo 74.1 23 0.00077 32.8 10.4 41 188-228 293-338 (350)
266 1hvx_A Alpha-amylase; hydrolas 73.8 4.6 0.00016 38.3 5.8 49 104-152 27-104 (515)
267 1icp_A OPR1, 12-oxophytodienoa 73.7 9.1 0.00031 35.3 7.7 25 183-207 254-278 (376)
268 3qc0_A Sugar isomerase; TIM ba 73.7 5.2 0.00018 33.3 5.6 106 42-150 19-143 (275)
269 1wzl_A Alpha-amylase II; pullu 73.7 3.1 0.00011 40.2 4.7 46 107-152 179-242 (585)
270 1w0m_A TIM, triosephosphate is 73.7 13 0.00045 32.2 8.3 46 107-152 78-123 (226)
271 2v82_A 2-dehydro-3-deoxy-6-pho 73.6 26 0.00088 28.7 9.8 72 54-148 33-106 (212)
272 3tr2_A Orotidine 5'-phosphate 73.6 18 0.0006 31.5 9.1 70 39-145 19-88 (239)
273 2pcq_A Putative dihydrodipicol 73.5 5.1 0.00018 35.4 5.7 75 102-207 20-97 (283)
274 3tdn_A FLR symmetric alpha-bet 73.5 4.8 0.00016 34.3 5.4 95 102-234 36-131 (247)
275 3bh4_A Alpha-amylase; calcium, 73.4 4.9 0.00017 37.5 5.9 50 103-152 23-101 (483)
276 2zds_A Putative DNA-binding pr 73.4 30 0.001 29.8 10.6 82 70-151 51-181 (340)
277 3dxi_A Putative aldolase; TIM 73.4 19 0.00066 32.7 9.7 148 41-227 88-240 (320)
278 3l5a_A NADH/flavin oxidoreduct 73.2 9.5 0.00033 35.9 7.8 27 183-209 262-289 (419)
279 1ud2_A Amylase, alpha-amylase; 73.2 5 0.00017 37.4 5.9 49 104-152 26-103 (480)
280 2guy_A Alpha-amylase A; (beta- 73.2 3.9 0.00013 38.1 5.1 48 106-153 48-121 (478)
281 1wpc_A Glucan 1,4-alpha-maltoh 73.1 5.1 0.00017 37.5 5.9 49 104-152 28-105 (485)
282 3vup_A Beta-1,4-mannanase; TIM 73.0 4.2 0.00015 34.0 4.9 51 102-152 43-112 (351)
283 2ekc_A AQ_1548, tryptophan syn 73.0 14 0.00047 32.2 8.3 18 188-206 218-235 (262)
284 3khj_A Inosine-5-monophosphate 72.8 12 0.00042 34.4 8.3 93 67-204 78-172 (361)
285 2whl_A Beta-mannanase, baman5; 72.8 5.4 0.00019 34.5 5.7 50 103-152 33-86 (294)
286 3aam_A Endonuclease IV, endoiv 72.7 6 0.00021 33.3 5.8 107 42-151 15-141 (270)
287 1tz9_A Mannonate dehydratase; 72.6 8.6 0.00029 34.6 7.1 88 102-204 22-114 (367)
288 1wv2_A Thiazole moeity, thiazo 72.6 39 0.0013 30.3 11.2 170 39-253 31-211 (265)
289 2yyu_A Orotidine 5'-phosphate 72.6 3 0.0001 36.1 3.9 95 39-145 15-113 (246)
290 2aaa_A Alpha-amylase; glycosid 72.6 3.8 0.00013 38.3 4.9 47 107-153 49-121 (484)
291 1ea9_C Cyclomaltodextrinase; h 72.1 3.8 0.00013 39.6 4.9 46 107-152 178-241 (583)
292 2qul_A D-tagatose 3-epimerase; 71.8 4.4 0.00015 34.2 4.7 109 43-151 19-154 (290)
293 3ngf_A AP endonuclease, family 71.8 15 0.00052 30.8 8.2 101 42-150 24-151 (269)
294 3ks6_A Glycerophosphoryl diest 71.8 10 0.00035 32.5 7.1 123 41-205 86-232 (250)
295 3ffs_A Inosine-5-monophosphate 71.6 12 0.0004 35.3 8.0 65 104-204 146-211 (400)
296 3apt_A Methylenetetrahydrofola 71.5 40 0.0014 30.2 11.3 140 39-204 27-179 (310)
297 2fiq_A Putative tagatose 6-pho 71.5 12 0.00042 35.5 8.1 154 68-238 61-257 (420)
298 2fty_A Dihydropyrimidinase; al 71.5 34 0.0012 32.7 11.4 104 42-152 152-280 (559)
299 1dbt_A Orotidine 5'-phosphate 71.4 2.3 7.8E-05 36.6 2.9 95 39-145 14-112 (239)
300 2q02_A Putative cytoplasmic pr 71.4 26 0.00089 29.0 9.4 94 54-151 33-141 (272)
301 3iix_A Biotin synthetase, puta 71.2 8.6 0.00029 33.9 6.7 137 67-232 84-224 (348)
302 2w91_A Endo-beta-N-acetylgluco 71.2 4.9 0.00017 40.3 5.6 85 52-142 89-193 (653)
303 4ab4_A Xenobiotic reductase B; 71.1 19 0.00064 33.3 9.1 24 184-207 241-264 (362)
304 2hsa_B 12-oxophytodienoate red 70.8 12 0.00043 34.8 8.0 25 183-207 258-288 (402)
305 2e8y_A AMYX protein, pullulana 70.7 3.3 0.00011 41.3 4.2 48 105-152 255-338 (718)
306 1uuq_A Mannosyl-oligosaccharid 70.7 6.5 0.00022 36.4 6.0 50 101-151 62-132 (440)
307 3nvt_A 3-deoxy-D-arabino-heptu 70.6 27 0.00091 32.6 10.2 42 187-228 328-374 (385)
308 3nco_A Endoglucanase fncel5A; 70.6 7.1 0.00024 34.1 5.9 50 103-152 43-104 (320)
309 3exr_A RMPD (hexulose-6-phosph 70.5 16 0.00054 31.1 8.0 100 26-143 8-108 (221)
310 3tfx_A Orotidine 5'-phosphate 70.5 30 0.001 30.6 10.0 69 39-144 15-84 (259)
311 3gka_A N-ethylmaleimide reduct 70.1 18 0.00063 33.3 8.8 24 184-207 249-272 (361)
312 3aty_A Tcoye, prostaglandin F2 70.0 14 0.00046 34.3 8.0 26 183-208 264-289 (379)
313 3ff4_A Uncharacterized protein 69.8 3.3 0.00011 32.5 3.3 42 100-147 68-109 (122)
314 3civ_A Endo-beta-1,4-mannanase 69.8 8.5 0.00029 35.1 6.5 50 104-153 56-120 (343)
315 1x7f_A Outer surface protein; 69.7 3.7 0.00013 38.7 4.1 67 79-153 26-97 (385)
316 1vzw_A Phosphoribosyl isomeras 69.6 13 0.00044 31.2 7.2 21 102-122 33-53 (244)
317 1zja_A Trehalulose synthase; s 69.5 5.1 0.00017 38.4 5.1 48 105-152 36-102 (557)
318 3tqv_A Nicotinate-nucleotide p 69.2 12 0.00042 33.8 7.3 114 74-238 126-248 (287)
319 3l23_A Sugar phosphate isomera 69.1 23 0.0008 30.6 9.0 103 43-149 31-165 (303)
320 3gdb_A Endo-D, putative unchar 68.9 5.5 0.00019 41.6 5.4 66 49-121 237-323 (937)
321 3aie_A Glucosyltransferase-SI; 68.9 5.5 0.00019 41.1 5.4 51 103-153 635-716 (844)
322 4aef_A Neopullulanase (alpha-a 68.6 5.1 0.00017 39.1 5.0 49 105-153 243-309 (645)
323 3gbc_A Pyrazinamidase/nicotina 68.6 3.6 0.00012 34.1 3.4 66 76-148 117-184 (186)
324 3vav_A 3-methyl-2-oxobutanoate 68.5 22 0.00074 32.0 8.7 74 110-207 45-128 (275)
325 1rpx_A Protein (ribulose-phosp 68.4 9 0.00031 32.1 5.9 39 102-142 24-66 (230)
326 2fli_A Ribulose-phosphate 3-ep 68.2 7.2 0.00025 32.1 5.2 41 102-142 17-59 (220)
327 3tr2_A Orotidine 5'-phosphate 67.8 18 0.00063 31.4 7.9 161 25-227 59-235 (239)
328 4avf_A Inosine-5'-monophosphat 67.8 42 0.0014 31.9 11.1 55 54-121 242-298 (490)
329 3cny_A Inositol catabolism pro 67.7 23 0.00078 29.8 8.4 102 42-151 35-162 (301)
330 3eww_A Ompdecase, orotidine-5' 67.6 7 0.00024 34.7 5.3 49 39-87 42-90 (260)
331 1zco_A 2-dehydro-3-deoxyphosph 67.6 18 0.0006 31.9 7.9 108 24-141 129-257 (262)
332 3dx5_A Uncharacterized protein 67.5 14 0.00046 31.2 6.9 79 69-151 47-144 (286)
333 4aee_A Alpha amylase, catalyti 67.5 5.6 0.00019 39.4 5.1 46 107-152 271-334 (696)
334 2p0o_A Hypothetical protein DU 67.4 5.2 0.00018 37.6 4.5 63 83-153 6-73 (372)
335 2bhu_A Maltooligosyltrehalose 67.4 6.2 0.00021 38.6 5.3 129 105-239 148-310 (602)
336 3aal_A Probable endonuclease 4 67.2 14 0.00048 31.7 7.1 100 42-141 19-136 (303)
337 3bdk_A D-mannonate dehydratase 67.2 6.7 0.00023 36.6 5.3 86 104-204 33-123 (386)
338 1ua7_A Alpha-amylase; beta-alp 67.0 5.1 0.00017 36.9 4.4 114 85-207 10-175 (422)
339 3txv_A Probable tagatose 6-pho 67.0 46 0.0016 32.0 11.1 130 67-221 3-148 (450)
340 1ub3_A Aldolase protein; schif 66.9 3.9 0.00013 35.4 3.3 123 39-205 17-153 (220)
341 1bqc_A Protein (beta-mannanase 66.8 6.8 0.00023 34.0 4.9 48 105-152 36-87 (302)
342 1m53_A Isomaltulose synthase; 66.7 6.3 0.00022 37.9 5.1 47 106-152 50-115 (570)
343 3l0g_A Nicotinate-nucleotide p 66.6 18 0.00062 33.0 7.9 41 188-238 217-257 (300)
344 3fs2_A 2-dehydro-3-deoxyphosph 66.4 15 0.0005 33.5 7.2 149 49-228 127-288 (298)
345 3jr2_A Hexulose-6-phosphate sy 66.4 15 0.00052 30.7 6.9 95 69-212 95-200 (218)
346 2h6r_A Triosephosphate isomera 66.3 28 0.00095 29.4 8.6 95 70-212 98-205 (219)
347 1qnr_A Endo-1,4-B-D-mannanase; 66.1 7.2 0.00025 33.9 5.0 52 101-152 36-112 (344)
348 3o0f_A Putative metal-dependen 65.9 8.1 0.00028 34.9 5.4 68 72-146 185-256 (301)
349 3glc_A Aldolase LSRF; TIM barr 65.8 12 0.00041 33.8 6.5 131 41-213 129-264 (295)
350 2dsk_A Chitinase; catalytic do 65.8 6.6 0.00023 35.8 4.8 75 67-142 58-138 (311)
351 3oa3_A Aldolase; structural ge 65.7 11 0.00036 34.3 6.1 105 102-238 75-183 (288)
352 1vrd_A Inosine-5'-monophosphat 65.3 24 0.00081 33.2 8.7 67 102-204 237-305 (494)
353 1jae_A Alpha-amylase; glycosid 65.3 3.9 0.00013 38.3 3.3 52 102-153 24-98 (471)
354 2zic_A Dextran glucosidase; TI 65.2 6.8 0.00023 37.4 5.0 47 106-152 36-101 (543)
355 1vs1_A 3-deoxy-7-phosphoheptul 65.2 34 0.0012 30.4 9.3 139 50-228 118-270 (276)
356 2y7e_A 3-keto-5-aminohexanoate 65.2 5.1 0.00017 36.1 3.9 46 183-229 32-77 (282)
357 3l5a_A NADH/flavin oxidoreduct 64.8 5.2 0.00018 37.7 4.0 24 102-125 265-289 (419)
358 3qvq_A Phosphodiesterase OLEI0 64.7 17 0.00057 31.1 7.0 121 41-205 98-238 (252)
359 2agk_A 1-(5-phosphoribosyl)-5- 64.7 6.4 0.00022 34.5 4.4 46 190-237 89-134 (260)
360 4ab4_A Xenobiotic reductase B; 64.6 17 0.0006 33.4 7.5 114 71-231 205-328 (362)
361 1m7x_A 1,4-alpha-glucan branch 64.5 10 0.00034 37.1 6.1 103 104-207 159-296 (617)
362 1mxg_A Alpha amylase; hyperthe 64.5 9.1 0.00031 35.5 5.6 46 107-152 34-109 (435)
363 4awe_A Endo-beta-D-1,4-mannana 64.5 5.6 0.00019 33.5 3.8 53 100-152 36-123 (387)
364 3edf_A FSPCMD, cyclomaltodextr 64.5 8.1 0.00028 37.5 5.5 49 105-153 152-222 (601)
365 3hv8_A Protein FIMX; EAL phosp 64.4 17 0.00057 30.9 6.9 89 63-152 113-230 (268)
366 1qop_A Tryptophan synthase alp 64.3 26 0.00088 30.4 8.2 19 188-206 217-235 (268)
367 3g3d_A UMP synthase, uridine 5 64.3 8.6 0.00029 35.2 5.3 49 39-87 94-142 (312)
368 3gka_A N-ethylmaleimide reduct 64.1 18 0.00061 33.4 7.4 84 103-231 252-336 (361)
369 2y88_A Phosphoribosyl isomeras 63.9 18 0.00063 30.1 7.0 91 102-234 32-125 (244)
370 1p1x_A Deoxyribose-phosphate a 63.7 44 0.0015 29.6 9.7 109 41-154 89-203 (260)
371 3oa3_A Aldolase; structural ge 63.7 14 0.00047 33.5 6.4 143 19-205 51-208 (288)
372 3ldv_A Orotidine 5'-phosphate 63.6 15 0.00051 32.4 6.6 125 66-226 114-252 (255)
373 4e8d_A Glycosyl hydrolase, fam 63.5 9.5 0.00033 37.9 5.8 53 100-152 31-93 (595)
374 1ps9_A 2,4-dienoyl-COA reducta 63.5 13 0.00046 36.2 6.8 22 183-204 226-247 (671)
375 1sfl_A 3-dehydroquinate dehydr 63.5 40 0.0014 29.0 9.2 107 68-204 45-161 (238)
376 1uok_A Oligo-1,6-glucosidase; 63.2 7.7 0.00026 37.2 5.0 46 107-152 37-101 (558)
377 3czg_A Sucrose hydrolase; (alp 63.1 9.8 0.00034 37.4 5.8 50 103-152 108-178 (644)
378 1ypf_A GMP reductase; GUAC, pu 63.1 84 0.0029 28.1 11.8 92 69-205 80-177 (336)
379 1p0k_A Isopentenyl-diphosphate 62.9 24 0.00081 31.7 8.0 19 104-122 192-210 (349)
380 1edg_A Endoglucanase A; family 62.8 10 0.00035 34.2 5.5 60 92-152 53-123 (380)
381 1eix_A Orotidine 5'-monophosph 62.8 1.5 5.2E-05 38.0 -0.1 102 26-144 17-119 (245)
382 2c0h_A Mannan endo-1,4-beta-ma 62.8 7.3 0.00025 34.1 4.4 49 102-150 46-111 (353)
383 1g5a_A Amylosucrase; glycosylt 62.6 7.8 0.00027 38.0 5.0 50 103-152 115-185 (628)
384 3fst_A 5,10-methylenetetrahydr 62.6 60 0.0021 29.2 10.5 133 47-206 45-184 (304)
385 3qm3_A Fructose-bisphosphate a 62.5 29 0.001 32.2 8.6 132 76-226 92-244 (357)
386 3aj7_A Oligo-1,6-glucosidase; 62.4 8.3 0.00028 37.4 5.1 47 106-152 45-110 (589)
387 1dos_A Aldolase class II; lyas 62.1 66 0.0023 29.8 10.9 171 39-226 38-246 (358)
388 1qho_A Alpha-amylase; glycosid 62.0 8.5 0.00029 37.9 5.2 46 107-152 58-130 (686)
389 2yr1_A 3-dehydroquinate dehydr 62.0 42 0.0014 29.3 9.2 104 68-204 61-175 (257)
390 3gdm_A Orotidine 5'-phosphate 61.9 9.5 0.00032 34.0 5.0 49 39-87 40-89 (267)
391 1wza_A Alpha-amylase A; hydrol 61.9 7.3 0.00025 36.4 4.4 47 106-152 32-104 (488)
392 3dc8_A Dihydropyrimidinase; TI 61.8 58 0.002 30.5 10.7 94 54-152 143-262 (490)
393 1yix_A Deoxyribonuclease YCFH; 61.5 68 0.0023 26.5 11.9 165 23-240 31-207 (265)
394 3sfw_A Dihydropyrimidinase; hy 61.4 51 0.0018 30.1 10.1 96 52-152 144-265 (461)
395 3v8e_A Nicotinamidase; hydrola 61.4 4.5 0.00015 34.3 2.7 64 78-148 148-215 (216)
396 1rh9_A Endo-beta-mannanase; en 61.4 14 0.00048 32.8 6.1 53 100-152 41-107 (373)
397 3ngj_A Deoxyribose-phosphate a 61.3 30 0.001 30.4 8.0 123 39-205 41-177 (239)
398 1i60_A IOLI protein; beta barr 61.3 21 0.00073 29.5 6.9 110 43-152 16-145 (278)
399 4dbe_A Orotidine 5'-phosphate 61.1 17 0.00059 31.1 6.4 21 193-214 175-195 (222)
400 2nv1_A Pyridoxal biosynthesis 61.0 8.1 0.00028 34.2 4.4 77 40-131 31-114 (305)
401 1vyr_A Pentaerythritol tetrani 61.0 22 0.00076 32.5 7.5 119 71-230 213-342 (364)
402 3aof_A Endoglucanase; glycosyl 60.8 12 0.00041 32.4 5.4 16 103-118 76-91 (317)
403 1gte_A Dihydropyrimidine dehyd 60.7 17 0.00059 37.6 7.4 73 102-204 649-734 (1025)
404 1yad_A Regulatory protein TENI 60.6 28 0.00097 28.7 7.5 69 41-124 30-98 (221)
405 4gj1_A 1-(5-phosphoribosyl)-5- 60.6 14 0.00046 32.0 5.7 41 188-234 87-127 (243)
406 3ru6_A Orotidine 5'-phosphate 60.6 40 0.0014 30.6 9.0 141 39-206 35-179 (303)
407 1gjw_A Maltodextrin glycosyltr 60.6 9.4 0.00032 37.3 5.1 50 103-152 122-204 (637)
408 3a24_A Alpha-galactosidase; gl 60.5 9.2 0.00031 38.3 5.1 47 101-147 309-364 (641)
409 3jug_A Beta-mannanase; TIM-bar 60.5 14 0.00049 33.6 6.1 49 104-152 57-109 (345)
410 1rd5_A Tryptophan synthase alp 60.5 39 0.0013 28.8 8.6 95 67-204 127-229 (262)
411 2gou_A Oxidoreductase, FMN-bin 60.4 21 0.0007 32.7 7.1 90 103-231 252-342 (365)
412 2wan_A Pullulanase; hydrolase, 60.4 8.5 0.00029 39.7 5.0 48 105-152 473-554 (921)
413 3vzx_A Heptaprenylglyceryl pho 60.3 20 0.00067 31.3 6.7 81 101-226 140-223 (228)
414 3elf_A Fructose-bisphosphate a 60.1 30 0.001 32.1 8.2 171 39-228 30-234 (349)
415 1ps9_A 2,4-dienoyl-COA reducta 60.1 5.9 0.0002 38.7 3.6 39 103-141 230-277 (671)
416 1h5y_A HISF; histidine biosynt 60.0 33 0.0011 28.1 7.8 89 102-229 155-248 (253)
417 1thf_D HISF protein; thermophI 60.0 48 0.0016 27.6 9.0 139 25-212 74-230 (253)
418 2hbv_A 2-amino-3-carboxymucona 60.0 33 0.0011 29.9 8.2 50 103-152 129-180 (334)
419 3qw3_A Orotidine-5-phosphate d 59.9 4.1 0.00014 36.0 2.2 91 26-122 16-112 (255)
420 1im5_A 180AA long hypothetical 59.6 6.7 0.00023 31.8 3.4 65 77-148 113-179 (180)
421 3thd_A Beta-galactosidase; TIM 59.6 12 0.00041 37.6 5.7 53 100-152 39-101 (654)
422 3n3m_A Orotidine 5'-phosphate 59.6 7.5 0.00026 36.1 4.0 73 44-121 107-184 (342)
423 1qo2_A Molecule: N-((5-phospho 59.2 9.6 0.00033 32.1 4.4 22 102-123 31-52 (241)
424 1o66_A 3-methyl-2-oxobutanoate 59.0 45 0.0015 29.9 8.9 75 110-207 33-117 (275)
425 4ef8_A Dihydroorotate dehydrog 58.8 39 0.0013 31.0 8.8 66 112-204 153-227 (354)
426 1ece_A Endocellulase E1; glyco 58.8 10 0.00035 33.4 4.7 51 102-152 45-117 (358)
427 3ajx_A 3-hexulose-6-phosphate 58.7 10 0.00036 30.9 4.4 37 103-142 12-50 (207)
428 2w6r_A Imidazole glycerol phos 58.5 12 0.00042 31.7 5.0 40 102-141 31-71 (266)
429 3obe_A Sugar phosphate isomera 58.5 56 0.0019 28.2 9.4 105 42-150 37-170 (305)
430 3bc9_A AMYB, alpha amylase, ca 58.4 13 0.00043 36.4 5.6 50 103-152 152-231 (599)
431 2xio_A Putative deoxyribonucle 58.3 91 0.0031 26.9 15.1 167 22-240 37-221 (301)
432 1r30_A Biotin synthase; SAM ra 58.2 24 0.00081 31.7 7.1 140 67-235 99-244 (369)
433 3aml_A OS06G0726400 protein; s 58.2 11 0.00038 38.0 5.3 102 106-207 207-346 (755)
434 1d3c_A Cyclodextrin glycosyltr 57.7 10 0.00035 37.4 4.8 49 104-152 58-138 (686)
435 1tg7_A Beta-galactosidase; TIM 57.7 9 0.00031 40.1 4.6 51 101-151 36-96 (971)
436 3lab_A Putative KDPG (2-keto-3 57.7 4.7 0.00016 35.1 2.2 103 71-227 94-210 (217)
437 2ze0_A Alpha-glucosidase; TIM 57.5 12 0.00042 35.7 5.3 49 105-153 35-102 (555)
438 3r12_A Deoxyribose-phosphate a 57.4 41 0.0014 30.0 8.3 126 29-202 51-190 (260)
439 1qtw_A Endonuclease IV; DNA re 57.4 81 0.0028 26.1 10.6 83 69-151 46-147 (285)
440 3sgz_A Hydroxyacid oxidase 2; 57.2 55 0.0019 30.2 9.5 41 91-131 125-165 (352)
441 4hty_A Cellulase; (alpha/beta) 57.2 14 0.00048 33.1 5.4 69 83-152 64-143 (359)
442 3c8f_A Pyruvate formate-lyase 57.1 6.3 0.00022 32.2 2.8 105 33-144 78-192 (245)
443 1eix_A Orotidine 5'-monophosph 57.1 34 0.0012 29.3 7.6 12 72-83 26-37 (245)
444 3ngj_A Deoxyribose-phosphate a 57.1 29 0.00099 30.5 7.2 104 102-238 44-152 (239)
445 3c6c_A 3-keto-5-aminohexanoate 57.1 10 0.00036 34.7 4.5 47 183-229 46-92 (316)
446 3cz8_A Putative sporulation-sp 57.1 22 0.00076 31.4 6.6 63 74-139 57-134 (319)
447 3pzg_A Mannan endo-1,4-beta-ma 57.0 15 0.0005 34.2 5.6 52 101-152 43-122 (383)
448 1ji1_A Alpha-amylase I; beta/a 57.0 10 0.00034 37.0 4.6 46 107-152 197-265 (637)
449 3vgf_A Malto-oligosyltrehalose 57.0 12 0.00043 35.9 5.3 130 105-238 123-285 (558)
450 4h3d_A 3-dehydroquinate dehydr 56.7 70 0.0024 27.9 9.7 102 68-204 61-175 (258)
451 2qw5_A Xylose isomerase-like T 56.5 34 0.0012 29.7 7.6 106 45-151 35-185 (335)
452 2vr5_A Glycogen operon protein 56.5 13 0.00045 37.1 5.5 120 106-225 207-386 (718)
453 3cjp_A Predicted amidohydrolas 56.5 40 0.0014 28.2 7.9 28 213-241 203-230 (272)
454 3ttq_A Dextransucrase; (beta/a 56.4 11 0.00039 40.0 5.1 51 103-153 855-936 (1108)
455 3nav_A Tryptophan synthase alp 56.3 58 0.002 28.8 9.1 20 188-207 220-239 (271)
456 3icg_A Endoglucanase D; cellul 56.2 8.9 0.0003 36.4 4.0 54 99-152 43-108 (515)
457 2ob3_A Parathion hydrolase; me 56.0 1.1E+02 0.0037 27.0 11.8 52 188-240 203-269 (330)
458 2otd_A Glycerophosphodiester p 55.9 27 0.00092 29.5 6.7 62 105-206 175-236 (247)
459 3r2j_A Alpha/beta-hydrolase-li 55.8 6.3 0.00021 33.9 2.7 64 78-148 151-216 (227)
460 1cyg_A Cyclodextrin glucanotra 55.5 8.7 0.0003 37.9 3.9 50 103-152 54-134 (680)
461 2hjp_A Phosphonopyruvate hydro 55.5 25 0.00086 31.5 6.7 71 111-207 32-112 (290)
462 3lot_A Uncharacterized protein 55.2 12 0.0004 34.3 4.5 46 183-228 30-75 (314)
463 4axn_A Chitinase C1; hydrolase 55.2 13 0.00046 33.0 4.8 53 69-121 82-139 (328)
464 2i2x_A MTAB, methyltransferase 55.2 17 0.00056 34.8 5.5 103 90-207 53-166 (461)
465 2wqp_A Polysialic acid capsule 55.1 40 0.0014 31.1 8.1 128 52-228 122-264 (349)
466 1geq_A Tryptophan synthase alp 54.8 92 0.0031 25.9 10.6 23 188-211 203-225 (248)
467 1kwg_A Beta-galactosidase; TIM 54.7 9.4 0.00032 37.4 4.0 47 102-150 15-71 (645)
468 3zss_A Putative glucanohydrola 54.6 17 0.00057 36.5 5.9 131 104-240 256-447 (695)
469 3bmv_A Cyclomaltodextrin gluca 54.6 12 0.00042 36.8 4.8 50 103-152 57-139 (683)
470 3m47_A Orotidine 5'-phosphate 54.5 26 0.00087 30.0 6.3 63 72-143 24-91 (228)
471 1yht_A DSPB; beta barrel, hydr 54.4 20 0.00067 33.0 5.9 74 66-152 29-117 (367)
472 3hvb_A Protein FIMX; EAL phosp 54.3 27 0.00092 31.8 6.8 88 64-152 283-399 (437)
473 3hm7_A Allantoinase; metallo-d 54.1 1.1E+02 0.0038 27.4 10.9 81 67-152 166-270 (448)
474 1vhn_A Putative flavin oxidore 53.9 28 0.00096 30.9 6.7 107 101-236 71-213 (318)
475 1m3u_A 3-methyl-2-oxobutanoate 53.7 46 0.0016 29.7 8.0 74 110-207 33-116 (264)
476 3chv_A Prokaryotic domain of u 53.7 13 0.00044 33.5 4.4 46 183-229 32-77 (284)
477 2czd_A Orotidine 5'-phosphate 53.4 22 0.00074 29.5 5.6 17 190-206 70-86 (208)
478 1bf2_A Isoamylase; hydrolase, 53.4 17 0.00058 36.5 5.7 47 107-153 211-296 (750)
479 2yw3_A 4-hydroxy-2-oxoglutarat 53.3 46 0.0016 27.8 7.7 65 102-205 26-90 (207)
480 3tdn_A FLR symmetric alpha-bet 53.2 12 0.0004 31.8 3.9 87 25-123 79-178 (247)
481 3inp_A D-ribulose-phosphate 3- 53.2 48 0.0016 28.9 8.0 73 101-207 40-118 (246)
482 3khj_A Inosine-5-monophosphate 53.1 1.3E+02 0.0045 27.4 11.3 18 189-206 220-237 (361)
483 1gkr_A Hydantoinase, non-ATP d 53.1 1.2E+02 0.0042 26.8 11.9 92 54-150 143-263 (458)
484 3ctl_A D-allulose-6-phosphate 53.0 22 0.00076 30.6 5.7 70 102-207 14-89 (231)
485 2wsk_A Glycogen debranching en 52.9 14 0.00047 36.4 4.9 101 106-208 184-339 (657)
486 3gk0_A PNP synthase, pyridoxin 52.9 16 0.00055 33.1 4.9 72 66-147 138-218 (278)
487 3u0h_A Xylose isomerase domain 52.8 44 0.0015 27.6 7.5 109 42-150 17-142 (281)
488 1p4c_A L(+)-mandelate dehydrog 52.6 39 0.0013 31.0 7.7 25 101-125 136-160 (380)
489 3klk_A Glucansucrase; native f 52.6 16 0.00055 38.6 5.6 47 107-153 692-769 (1039)
490 2yv2_A Succinyl-COA synthetase 52.5 20 0.00067 31.9 5.4 45 100-147 81-126 (297)
491 2z2u_A UPF0026 protein MJ0257; 52.4 88 0.003 26.9 9.6 80 55-152 129-224 (311)
492 1zlp_A PSR132, petal death pro 52.3 26 0.00088 32.0 6.3 72 111-207 56-138 (318)
493 4ef8_A Dihydroorotate dehydrog 52.2 1.4E+02 0.0048 27.3 12.2 50 66-124 175-231 (354)
494 2dfa_A Hypothetical UPF0271 pr 52.1 1.2E+02 0.0043 26.8 10.5 126 75-218 94-229 (250)
495 2r14_A Morphinone reductase; H 52.0 13 0.00046 34.2 4.4 120 71-231 218-348 (377)
496 2f6u_A GGGPS, (S)-3-O-geranylg 52.0 14 0.00047 32.3 4.2 66 101-206 149-219 (234)
497 1wky_A Endo-beta-1,4-mannanase 51.9 20 0.00068 33.8 5.7 48 104-151 42-93 (464)
498 1vjz_A Endoglucanase; TM1752, 51.9 22 0.00074 31.2 5.6 52 101-152 36-99 (341)
499 1ceo_A Cellulase CELC; glycosy 51.9 26 0.00088 30.6 6.1 51 102-152 29-91 (343)
500 2ze3_A DFA0005; organic waste 51.7 28 0.00096 31.0 6.3 71 112-207 34-114 (275)
No 1
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=100.00 E-value=8.3e-83 Score=573.35 Aligned_cols=209 Identities=21% Similarity=0.383 Sum_probs=200.6
Q ss_pred CCCCCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCC-cHHHHHHH
Q 025344 19 EKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIR 97 (254)
Q Consensus 19 ~KPR~~GlT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~G-tl~E~a~~ 97 (254)
+|||++|+|||+|||+ |+++++|+|++||+|||++|||||||+|||+++|++||++||+|||+|||| ||||+|++
T Consensus 8 ~KPR~~GlT~v~dkgl----g~~~~~d~Le~~g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~ 83 (251)
T 1qwg_A 8 YEDFQRGLTVVLDKGL----PPKFVEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYS 83 (251)
T ss_dssp CCCCCCCCEEEEESSC----CHHHHHHHHHHHGGGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHH
T ss_pred CCCcccCeeEEecCCC----CHHHHHHHHHHhhhhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHH
Confidence 9999999999999997 889999999999999999999999999999999999999999999999997 59999999
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCc
Q 025344 98 NGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (254)
Q Consensus 98 qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~ 177 (254)
|| ++++|+++||++||++|||||||++||+++|+++|++++++||+|+||+|+|++. .+
T Consensus 84 qg--~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~------~~------------- 142 (251)
T 1qwg_A 84 KG--KFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPD------KD------------- 142 (251)
T ss_dssp TT--CHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHH------HH-------------
T ss_pred cC--cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCc------cc-------------
Confidence 99 9999999999999999999999999999999999999999999999999998762 11
Q ss_pred cccccCHHHHHHHHHHHHHcCCcEEEEecc------cccccCCCccHHHHHHHHhccCCCceEEecCCchhHHHHHHHhC
Q 025344 178 TEYVEDVDLLIRRAERCLEAGADMIMIDSD------DVCKHADSLRADIIAKVIGRLGLEKTMFEATNPRTSEWFIRRYG 251 (254)
Q Consensus 178 ~~~~~d~~~~i~~~~~dLeAGA~~ViiEar------gi~d~~g~~r~d~i~~ii~~l~~~klifEAP~k~qQ~~~I~~~G 251 (254)
.+.|+++||+++++||+|||++|||||| |||+++|+||+|++++|++++|++|||||||+|+||+|||++||
T Consensus 143 --~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~~~g~~r~d~v~~i~~~l~~eklifEAp~k~qq~~fI~~fG 220 (251)
T 1qwg_A 143 --KQLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFDKEGKVKENELDVLAKNVDINKVIFEAPQKSQQVAFILKFG 220 (251)
T ss_dssp --TTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBCTTSCBCHHHHHHHHTTSCGGGEEEECCSHHHHHHHHHHHC
T ss_pred --CCCCHHHHHHHHHHHHHCCCcEEEEeeecccCCcccCCCCCCCcHHHHHHHHHhCChhhEEEECCChHHHHHHHHHhC
Confidence 1236999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred CCC
Q 025344 252 PKV 254 (254)
Q Consensus 252 p~V 254 (254)
|||
T Consensus 221 ~~V 223 (251)
T 1qwg_A 221 SSV 223 (251)
T ss_dssp TTC
T ss_pred CCc
Confidence 998
No 2
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=100.00 E-value=9e-82 Score=572.16 Aligned_cols=217 Identities=20% Similarity=0.380 Sum_probs=189.2
Q ss_pred cccCC-CCCCCCCCCCCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCcee
Q 025344 8 WKSFD-EYEDRAEKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV 86 (254)
Q Consensus 8 ~~~f~-~l~~R~~KPR~~GlT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v 86 (254)
++.|. ++|.|++|||.+|+|||+|||+ |+++++|+|++||+|||++|||||||+|||+ |++||++||+|||+|
T Consensus 23 m~~~~f~~~~R~~KPR~~GlT~v~Dkgl----g~~~~~DlLe~ag~yID~lKfg~GTs~l~~~--l~ekI~l~~~~gV~v 96 (276)
T 1u83_A 23 MNDFSLELPVRTNKPRETGQSILIDNGY----PLQFFKDAIAGASDYIDFVKFGWGTSLLTKD--LEEKISTLKEHDITF 96 (276)
T ss_dssp --CCCCCCCCCCCSSCSSSCEEEEESSC----CHHHHHHHHHHHGGGCCEEEECTTGGGGCTT--HHHHHHHHHHTTCEE
T ss_pred cccccCCCCCcCCCCcccCceEEecCCC----CHHHHHHHHHHhhhhcceEEecCcchhhhHH--HHHHHHHHHHcCCeE
Confidence 34555 3699999999999999999997 8899999999999999999999999999999 999999999999999
Q ss_pred cCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccc
Q 025344 87 STG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR 165 (254)
Q Consensus 87 ~~G-tl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~ 165 (254)
||| ||||+|++|| ++++|+++||++||++|||||||++||+++|+++|+++++. |+|+||+|+|++.. +
T Consensus 97 ~~GGTlfE~~l~qg--~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~-f~Vl~EvG~K~~~~------~- 166 (276)
T 1u83_A 97 FFGGTLFEKYVSQK--KVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDE-FLVLSEVGSKDAEL------A- 166 (276)
T ss_dssp EECHHHHHHHHHTT--CHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTT-SEEEEECSCCC-----------
T ss_pred eCCcHHHHHHHHcC--cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhh-cEEeeeccccCccc------c-
Confidence 997 5999999999 99999999999999999999999999999999999999999 99999999997621 1
Q ss_pred ccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecc-----cccccCCCccHHHH-HHHHhccCCCceEEecCC
Q 025344 166 AFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-----DVCKHADSLRADII-AKVIGRLGLEKTMFEATN 239 (254)
Q Consensus 166 ~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar-----gi~d~~g~~r~d~i-~~ii~~l~~~klifEAP~ 239 (254)
.+.++++||+++++||+|||++|||||| |||+++|+||+|++ ++|++++|++|||||||+
T Consensus 167 --------------~~~~~~~~I~~~~~dLeAGA~~ViiEaRESG~~Gi~~~~g~~r~d~v~~~i~~~l~~eklifEAp~ 232 (276)
T 1u83_A 167 --------------SRQSSEEWLEYIVEDMEAGAEKVITEARESGTGGICSSSGDVRFQIVDDIISSDIDINRLIFEAPN 232 (276)
T ss_dssp ----------------CCSTHHHHHHHHHHHHTEEEEEEC------------------CCHHHHHTTTSCGGGEEEECCS
T ss_pred --------------CCCCHHHHHHHHHHHHHCCCcEEEEeeeccCCCCccCCCCCCcHHHHHHHHHhhCChhhEEEECCC
Confidence 1225788899999999999999999996 89999999999999 999999999999999999
Q ss_pred chhHHHHHHHhCCCC
Q 025344 240 PRTSEWFIRRYGPKV 254 (254)
Q Consensus 240 k~qQ~~~I~~~Gp~V 254 (254)
|+||+|||++|||||
T Consensus 233 k~qq~~fI~~fGp~V 247 (276)
T 1u83_A 233 KTLQQGFIQKIGPNV 247 (276)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCc
Confidence 999999999999998
No 3
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=96.36 E-value=0.021 Score=51.03 Aligned_cols=160 Identities=11% Similarity=0.057 Sum_probs=102.2
Q ss_pred hHHHHHHHhhcccccEEeecCccc--------ccCCh---hHHHHHHHHHHhCCceec--CCc-H-HHHHHHhCCchHHH
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSH--------SLMPK---PFIEEVVKRAHQHDVYVS--TGD-W-AEHLIRNGPSAFKE 105 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~--------~l~~~---~~l~eKi~l~~~~gV~v~--~Gt-l-~E~a~~qg~~~~~~ 105 (254)
..++..+++ -+|.+-+...+| -...+ +.+++-++.+|++|+.|. .++ + .|.....+++.+.+
T Consensus 83 ~~i~~a~~~---G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~ 159 (295)
T 1ydn_A 83 KGYEAAAAA---HADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVAS 159 (295)
T ss_dssp HHHHHHHHT---TCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHH
T ss_pred HHHHHHHHC---CCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHH
Confidence 445555554 456666655555 22222 234666999999999875 121 1 13323344556677
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHH
Q 025344 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVD 185 (254)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~ 185 (254)
+++.+.++|.+.|=|.|-.--+.+++-.++|+.+++. +. ...++.-. +.+ ..
T Consensus 160 ~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~-~~-~~~l~~H~-Hn~-------------------------~G 211 (295)
T 1ydn_A 160 VTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAI-AP-AHSLAGHY-HDT-------------------------GG 211 (295)
T ss_dssp HHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTT-SC-GGGEEEEE-BCT-------------------------TS
T ss_pred HHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHh-CC-CCeEEEEE-CCC-------------------------cc
Confidence 7777779999999999866678888888999999884 21 01233321 111 11
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccc------cCCCccHHHHHHHHhccCCC
Q 025344 186 LLIRRAERCLEAGADMIMIDSDDVCK------HADSLRADIIAKVIGRLGLE 231 (254)
Q Consensus 186 ~~i~~~~~dLeAGA~~ViiEargi~d------~~g~~r~d~i~~ii~~l~~~ 231 (254)
.-+..+...++|||++|=+=-.|+-. ..||+.++.+-..+...|.+
T Consensus 212 la~an~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~~~g~~ 263 (295)
T 1ydn_A 212 RALDNIRVSLEKGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLHEMGFE 263 (295)
T ss_dssp CHHHHHHHHHHHTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHHHTTCB
T ss_pred hHHHHHHHHHHhCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHHhcCCC
Confidence 22667788899999977653347766 68999988887777766643
No 4
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=96.27 E-value=0.056 Score=45.11 Aligned_cols=143 Identities=15% Similarity=0.049 Sum_probs=85.9
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~--gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~ 116 (254)
.+...-++++..++++|++|.|+=.+.-... +-|+..|++ +++++-..-+ .. -.+.+++.|.+.|.+
T Consensus 11 ~~~~~~~~~~~~~~~~diie~G~p~~~~~g~----~~i~~ir~~~~~~~i~~~~~~-----~~--~~~~~~~~~~~~Gad 79 (211)
T 3f4w_A 11 TLPEAMVFMDKVVDDVDIIEVGTPFLIREGV----NAIKAIKEKYPHKEVLADAKI-----MD--GGHFESQLLFDAGAD 79 (211)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECHHHHHHHTT----HHHHHHHHHCTTSEEEEEEEE-----CS--CHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHhhcCccEEEeCcHHHHhccH----HHHHHHHHhCCCCEEEEEEEe-----cc--chHHHHHHHHhcCCC
Confidence 4566777777777899999999621111112 234444443 6666443211 11 234458999999999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHcCCccccee-eeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHH
Q 025344 117 TIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF-AVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCL 195 (254)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~-g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dL 195 (254)
.|=+.+-. +.+...++++.+++.|+++..++ +. | ++ .++++..+
T Consensus 80 ~v~v~~~~---~~~~~~~~~~~~~~~g~~~~v~~~~~-----------------------~------t~---~~~~~~~~ 124 (211)
T 3f4w_A 80 YVTVLGVT---DVLTIQSCIRAAKEAGKQVVVDMICV-----------------------D------DL---PARVRLLE 124 (211)
T ss_dssp EEEEETTS---CHHHHHHHHHHHHHHTCEEEEECTTC-----------------------S------SH---HHHHHHHH
T ss_pred EEEEeCCC---ChhHHHHHHHHHHHcCCeEEEEecCC-----------------------C------CH---HHHHHHHH
Confidence 99996543 34566789999999988766431 11 0 12 56677888
Q ss_pred HcCCcEEEEeccccccc-CCCccHHHHHHHHhcc
Q 025344 196 EAGADMIMIDSDDVCKH-ADSLRADIIAKVIGRL 228 (254)
Q Consensus 196 eAGA~~ViiEargi~d~-~g~~r~d~i~~ii~~l 228 (254)
++|+++|.+.. |.... .+....+.+.++.+.+
T Consensus 125 ~~g~d~i~v~~-g~~g~~~~~~~~~~i~~l~~~~ 157 (211)
T 3f4w_A 125 EAGADMLAVHT-GTDQQAAGRKPIDDLITMLKVR 157 (211)
T ss_dssp HHTCCEEEEEC-CHHHHHTTCCSHHHHHHHHHHC
T ss_pred HcCCCEEEEcC-CCcccccCCCCHHHHHHHHHHc
Confidence 99999998862 21100 1111345666665544
No 5
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=96.25 E-value=0.084 Score=44.89 Aligned_cols=78 Identities=6% Similarity=0.103 Sum_probs=60.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc--cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL--EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti--~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~ 179 (254)
.+++.++.++++||+.||+....+ .++.++..++.+.++++|+++.+ ++.-..
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~~~~------------------------ 85 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYA-VGPIYM------------------------ 85 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEE-EEEEEE------------------------
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEE-Eecccc------------------------
Confidence 689999999999999999998743 56678888999999999998754 332100
Q ss_pred cccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 180 YVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 180 ~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
.+.+.+.+.++..-+.||.+|.+..
T Consensus 86 --~~~~~~~~~i~~A~~lGa~~v~~~p 110 (257)
T 3lmz_A 86 --KSEEEIDRAFDYAKRVGVKLIVGVP 110 (257)
T ss_dssp --CSHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred --CCHHHHHHHHHHHHHhCCCEEEecC
Confidence 1366777778888889999999864
No 6
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=95.98 E-value=0.11 Score=44.14 Aligned_cols=78 Identities=15% Similarity=0.213 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS------------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGA 169 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt------------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~ 169 (254)
.+++.++.++++||++||+.... ..++.++..++-+.++++|+++.+ ++.-.. .
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~~~~-------~------ 88 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVG-TGVYVA-------E------ 88 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEE-EEEECC-------S------
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEE-EeccCC-------c------
Confidence 68999999999999999998652 356788888999999999998654 222100 0
Q ss_pred ccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 170 YVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 170 ~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+.+.+.+.++.+-+.||..|++..
T Consensus 89 -------------~~~~~~~~i~~A~~lGa~~v~~~~ 112 (262)
T 3p6l_A 89 -------------KSSDWEKMFKFAKAMDLEFITCEP 112 (262)
T ss_dssp -------------STTHHHHHHHHHHHTTCSEEEECC
T ss_pred -------------cHHHHHHHHHHHHHcCCCEEEecC
Confidence 133455666666778999999975
No 7
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=95.84 E-value=0.13 Score=48.50 Aligned_cols=123 Identities=17% Similarity=0.289 Sum_probs=87.4
Q ss_pred ccEEeecCcccccCChhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchH-HHHHHHHHHcCCCEEEecCCcc------
Q 025344 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAF-KEYVEDCKQVGFDTIELNVGSL------ 125 (254)
Q Consensus 54 ID~lKfg~GT~~l~~~~~l~eKi~l~~~~-gV~v~~Gtl~E~a~~qg~~~~-~~yl~~~k~lGF~~IEISdGti------ 125 (254)
|+.+-||+||..+.+.+.|.+.++.++++ ++. .+ .|+.+.-+|+.+ ++.++.++++|++.|+|+--|.
T Consensus 105 i~~i~fgGGtpt~l~~~~l~~ll~~i~~~~~~~--~~--~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~ 180 (457)
T 1olt_A 105 VSQLHWGGGTPTYLNKAQISRLMKLLRENFQFN--AD--AEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQR 180 (457)
T ss_dssp EEEEEEEESCGGGSCHHHHHHHHHHHHHHSCEE--EE--EEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHH
T ss_pred eEEEEEeCCCcccCCHHHHHHHHHHHHHhCCCC--CC--cEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHH
Confidence 78899999999999988999999999873 110 00 011111123332 5788999999999999974443
Q ss_pred ----cCChhHHHHHHHHHHHcCCc-ccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCc
Q 025344 126 ----EIPEETLLRYVRLVKSAGLK-AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD 200 (254)
Q Consensus 126 ----~i~~~~r~~lI~~~~~~G~~-v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~ 200 (254)
.-+.++-.+.|+.+++.||. +...+=. +. + -++.+++.+.++..++.|.+
T Consensus 181 ~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~--Gl--P---------------------get~e~~~~tl~~~~~l~~~ 235 (457)
T 1olt_A 181 LVNREQDEEFIFALLNHAREIGFTSTNIDLIY--GL--P---------------------KQTPESFAFTLKRVAELNPD 235 (457)
T ss_dssp HHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEE--SC--T---------------------TCCHHHHHHHHHHHHHHCCS
T ss_pred HhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEc--CC--C---------------------CCCHHHHHHHHHHHHhcCcC
Confidence 23567888999999999997 6554432 11 0 01478889999999999999
Q ss_pred EEEEe
Q 025344 201 MIMID 205 (254)
Q Consensus 201 ~ViiE 205 (254)
.|-+=
T Consensus 236 ~i~~y 240 (457)
T 1olt_A 236 RLSVF 240 (457)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 88764
No 8
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=95.79 E-value=0.056 Score=48.64 Aligned_cols=158 Identities=14% Similarity=0.096 Sum_probs=102.2
Q ss_pred hHHHHHHHhhcccccEEeecCcccccCCh-----------hHHHHHHHHHHhCCceec------CCcHHHHHHHhCCchH
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVS------TGDWAEHLIRNGPSAF 103 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~~l~~~-----------~~l~eKi~l~~~~gV~v~------~Gtl~E~a~~qg~~~~ 103 (254)
..++..+++ =+|.+-+..++|-++.+ +.+++-++.+|++|+.|. .|.-++ -.-+++.+
T Consensus 87 ~~i~~a~~a---G~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~--~~~~~~~~ 161 (302)
T 2ftp_A 87 KGFEAALES---GVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYD--GDVDPRQV 161 (302)
T ss_dssp HHHHHHHHT---TCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTT--BCCCHHHH
T ss_pred HHHHHHHhC---CcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC--CCCCHHHH
Confidence 444555553 46777776667654322 235888999999999883 232111 12233455
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccC
Q 025344 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVED 183 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d 183 (254)
.++++.+.+.|.+.|=|.|-.--+.+.+-.++|+.+++. +. ...++.- .+. |
T Consensus 162 ~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~-~~-~~~l~~H-~Hn-------------------------~ 213 (302)
T 2ftp_A 162 AWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASE-VP-RERLAGH-FHD-------------------------T 213 (302)
T ss_dssp HHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTT-SC-GGGEEEE-EBC-------------------------T
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHh-CC-CCeEEEE-eCC-------------------------C
Confidence 566666669999999999866667888888999999874 21 1123331 111 1
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecccccc------cCCCccHHHHHHHHhccCCC
Q 025344 184 VDLLIRRAERCLEAGADMIMIDSDDVCK------HADSLRADIIAKVIGRLGLE 231 (254)
Q Consensus 184 ~~~~i~~~~~dLeAGA~~ViiEargi~d------~~g~~r~d~i~~ii~~l~~~ 231 (254)
...-+..+...++|||++|=+=-.|+=. ..||..++.+-..+...|.+
T Consensus 214 ~Gla~An~laAv~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~~g~~ 267 (302)
T 2ftp_A 214 YGQALANIYASLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNGLEIH 267 (302)
T ss_dssp TSCHHHHHHHHHHTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHHTTCB
T ss_pred ccHHHHHHHHHHHhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHhcCCC
Confidence 2233778889999999876333347766 78999998887787766643
No 9
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=95.70 E-value=0.31 Score=41.10 Aligned_cols=129 Identities=12% Similarity=0.143 Sum_probs=74.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc--c-CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL--E-IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti--~-i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
.+++.++.++++||+.||+..... . .+..+..++-+.+++.|+++.+ ++.-.+... .|++
T Consensus 20 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~-~~~~~~~~~----~~~~------------ 82 (272)
T 2q02_A 20 SIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVT-INAVYPFNQ----LTEE------------ 82 (272)
T ss_dssp CHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEE-EEEETTTTS----CCHH------------
T ss_pred CHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEe-chhhhccCC----cHHH------------
Confidence 688899999999999999985432 1 2446677788888999998754 222111110 0110
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCcc---HHHHHH---HHhccCCCceEEecC--------CchhHH
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLR---ADIIAK---VIGRLGLEKTMFEAT--------NPRTSE 244 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r---~d~i~~---ii~~l~~~klifEAP--------~k~qQ~ 244 (254)
..+.+.+.++..-+.||..|.+-+- .... ..++ .+.+.+ +++..|+ +|.+|.- ...+-.
T Consensus 83 ----~~~~~~~~i~~a~~lG~~~v~~~~g-~~~~-~~~~~~~~~~l~~l~~~a~~~gv-~l~~E~~~~~~~~~~~~~~~~ 155 (272)
T 2q02_A 83 ----VVKKTEGLLRDAQGVGARALVLCPL-NDGT-IVPPEVTVEAIKRLSDLFARYDI-QGLVEPLGFRVSSLRSAVWAQ 155 (272)
T ss_dssp ----HHHHHHHHHHHHHHHTCSEEEECCC-CSSB-CCCHHHHHHHHHHHHHHHHTTTC-EEEECCCCSTTCSCCCHHHHH
T ss_pred ----HHHHHHHHHHHHHHhCCCEEEEccC-CCch-hHHHHHHHHHHHHHHHHHHHcCC-EEEEEecCCCcccccCHHHHH
Confidence 1345566666666789999988432 1111 1111 223333 3344554 4777753 234455
Q ss_pred HHHHHhCCCC
Q 025344 245 WFIRRYGPKV 254 (254)
Q Consensus 245 ~~I~~~Gp~V 254 (254)
.++++.+|+|
T Consensus 156 ~l~~~v~~~~ 165 (272)
T 2q02_A 156 QLIREAGSPF 165 (272)
T ss_dssp HHHHHHTCCC
T ss_pred HHHHHhCcCe
Confidence 7888877654
No 10
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=95.46 E-value=0.099 Score=44.62 Aligned_cols=121 Identities=15% Similarity=0.177 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
.+++.++.++++||+.||+......-+. +..++-+.++++|+++..-..... .+. +.
T Consensus 24 ~~~~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~~~~~~~~-~~~-----~~---------------- 80 (264)
T 1yx1_A 24 GQASFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECVFSSPLEL-WRE-----DG---------------- 80 (264)
T ss_dssp CGGGGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEEEEEEEEE-ECT-----TS----------------
T ss_pred CHHHHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEEEecchhh-cCC-----ch----------------
Confidence 5788999999999999999754332223 667888889999998753211110 000 00
Q ss_pred cCH-HHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceEEecCCc------hhHHHHHHHh
Q 025344 182 EDV-DLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNP------RTSEWFIRRY 250 (254)
Q Consensus 182 ~d~-~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~klifEAP~k------~qQ~~~I~~~ 250 (254)
+. +.+.+.++..-+.||..|.+-.- -+.... .-..+.++++..|+ +|.+|.-.. .+-..++...
T Consensus 81 -~~~~~~~~~i~~A~~lGa~~v~~~~g-~~~~~~--~l~~l~~~a~~~Gv-~l~lEn~~~~~~~~~~~~~~ll~~v 151 (264)
T 1yx1_A 81 -QLNPELEPTLRRAEACGAGWLKVSLG-LLPEQP--DLAALGRRLARHGL-QLLVENDQTPQGGRIEVLERFFRLA 151 (264)
T ss_dssp -SBCTTHHHHHHHHHHTTCSEEEEEEE-CCCSSC--CHHHHHHHHTTSSC-EEEEECCSSHHHHCHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHcCCCEEEEecC-CCCcHH--HHHHHHHHHHhcCC-EEEEecCCCCCCCCHHHHHHHHHHH
Confidence 12 33455666666789999998753 222222 34456666666666 677885432 3444555555
No 11
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=95.43 E-value=0.16 Score=45.45 Aligned_cols=159 Identities=13% Similarity=0.130 Sum_probs=106.2
Q ss_pred hhHHHHHHHhhcccccEEeecCcccccCCh-----------hHHHHHHHHHHhCCceecC------CcHHHHHHHhCCch
Q 025344 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVST------GDWAEHLIRNGPSA 102 (254)
Q Consensus 40 ~~~~~DlLe~ag~yID~lKfg~GT~~l~~~-----------~~l~eKi~l~~~~gV~v~~------Gtl~E~a~~qg~~~ 102 (254)
...++..+++ -+|.+-+...+|-.+.. +.+++-++.++++|+.|.. |- |.+-..+++.
T Consensus 83 ~~~i~~a~~a---g~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~--~~~~~~~~~~ 157 (298)
T 2cw6_A 83 LKGFEAAVAA---GAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGC--PYEGKISPAK 157 (298)
T ss_dssp HHHHHHHHHT---TCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCB--TTTBSCCHHH
T ss_pred HHhHHHHHHC---CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeC--CcCCCCCHHH
Confidence 3455555555 46677776666644322 2467789999999998842 21 2111223446
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~ 182 (254)
+.++.+.+.++|.+.|=|.|-.--+.+.+-.++|+.+++. +. ...+++-+ +.+
T Consensus 158 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~-~~-~~~i~~H~-Hn~------------------------ 210 (298)
T 2cw6_A 158 VAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQE-VP-LAALAVHC-HDT------------------------ 210 (298)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHH-SC-GGGEEEEE-BCT------------------------
T ss_pred HHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHh-CC-CCeEEEEE-CCC------------------------
Confidence 7778888899999999999988889999999999999985 21 11234311 111
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccccc------cCCCccHHHHHHHHhccCCC
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDVCK------HADSLRADIIAKVIGRLGLE 231 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi~d------~~g~~r~d~i~~ii~~l~~~ 231 (254)
...-+..+...++|||+.|=.=-.|+=. ..||+.++.+-..+...|.+
T Consensus 211 -~Gla~An~laA~~aGa~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~~g~~ 264 (298)
T 2cw6_A 211 -YGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIH 264 (298)
T ss_dssp -TSCHHHHHHHHHHTTCCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHHHTCB
T ss_pred -CchHHHHHHHHHHhCCCEEEeecccccCCCCCCCCcCChhHHHHHHHHHhcCCC
Confidence 2223666778899999976542236655 69999999888888766643
No 12
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=95.40 E-value=0.083 Score=48.45 Aligned_cols=156 Identities=16% Similarity=0.150 Sum_probs=106.3
Q ss_pred hHHHHHHHhhcccccEEeecCcccccCCh-----------hHHHHHHHHHHhCCceecCC--cHHHHHHHhCCchHHHHH
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTG--DWAEHLIRNGPSAFKEYV 107 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~~l~~~-----------~~l~eKi~l~~~~gV~v~~G--tl~E~a~~qg~~~~~~yl 107 (254)
+.++..+++- +|.+-+-..+|-.+.. +.+++-++.++++|+.|... .|+. +-...++.+-+..
T Consensus 100 ~~i~~a~~~g---~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~-~~~~~~~~~~~~~ 175 (337)
T 3ble_A 100 KTVDWIKDSG---AKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSN-GFRNSPDYVKSLV 175 (337)
T ss_dssp HHHHHHHHHT---CCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHH-HHHHCHHHHHHHH
T ss_pred hhHHHHHHCC---CCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC-CCcCCHHHHHHHH
Confidence 4555555544 4556555545443211 45788899999999987754 3322 3344455777888
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHH
Q 025344 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLL 187 (254)
Q Consensus 108 ~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~ 187 (254)
+.+.++|.+.|=|.|-.--+.+.+-.++|+.+++. + +...++.-+ + .|...-
T Consensus 176 ~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~-~-p~~~i~~H~-H-------------------------nd~GlA 227 (337)
T 3ble_A 176 EHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQK-Y-PDIHFEFHG-H-------------------------NDYDLS 227 (337)
T ss_dssp HHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHH-C-TTSCEEEEC-B-------------------------CTTSCH
T ss_pred HHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHh-c-CCCeEEEEe-c-------------------------CCcchH
Confidence 88899999999999988888999999999999884 2 012233311 1 123334
Q ss_pred HHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 188 IRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 188 i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
+..+...++|||+.|=.=-.|+=...||..++.+-..+...
T Consensus 228 ~AN~laAv~aGa~~vd~tv~GlG~~aGN~~~E~lv~~L~~~ 268 (337)
T 3ble_A 228 VANSLQAIRAGVKGLHASINGLGERAGNTPLEALVTTIHDK 268 (337)
T ss_dssp HHHHHHHHHTTCSEEEEBGGGCSSTTCBCBHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecccccccccchhHHHHHHHHHHh
Confidence 77888889999996633334888899999988877666544
No 13
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=95.31 E-value=0.016 Score=53.60 Aligned_cols=140 Identities=16% Similarity=0.154 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHhC-------CceecCCcHHHHH-HHhCCchHHHHHHHHHHcCCCEEEecCCccc----C--ChhHHHHH
Q 025344 70 PFIEEVVKRAHQH-------DVYVSTGDWAEHL-IRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----I--PEETLLRY 135 (254)
Q Consensus 70 ~~l~eKi~l~~~~-------gV~v~~Gtl~E~a-~~qg~~~~~~yl~~~k~lGF~~IEISdGti~----i--~~~~r~~l 135 (254)
..+.|.|+-.++. +|++++..|.+-- +... ...++.+.+.+.|+++|+||+|+.. + ++.....+
T Consensus 209 r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~--~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~ 286 (363)
T 3l5l_A 209 RFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLE--ESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPI 286 (363)
T ss_dssp HHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHH--HHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHH
T ss_pred HHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHH--HHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHH
Confidence 3567777777764 2355554332211 2222 4566778888999999999998642 1 23234566
Q ss_pred HHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcC-CcEEEEecccccccCC
Q 025344 136 VRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHAD 214 (254)
Q Consensus 136 I~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAG-A~~ViiEargi~d~~g 214 (254)
++.+++. +++ +.--+| .+. | .+.+++.|++| ||.|++ +|.+..
T Consensus 287 ~~~ir~~-------~~i--PVi~~G--------gI~-----------s----~e~a~~~l~~G~aD~V~i-GR~~la--- 330 (363)
T 3l5l_A 287 AERVRRE-------AKL--PVTSAW--------GFG-----------T----PQLAEAALQANQLDLVSV-GRAHLA--- 330 (363)
T ss_dssp HHHHHHH-------HTC--CEEECS--------STT-----------S----HHHHHHHHHTTSCSEEEC-CHHHHH---
T ss_pred HHHHHHH-------cCC--cEEEeC--------CCC-----------C----HHHHHHHHHCCCccEEEe-cHHHHh---
Confidence 6666662 221 110011 111 2 56778889999 999988 565543
Q ss_pred CccHHHHHHHHhccCCCceEEecCCchhHHHHHHHhC
Q 025344 215 SLRADIIAKVIGRLGLEKTMFEATNPRTSEWFIRRYG 251 (254)
Q Consensus 215 ~~r~d~i~~ii~~l~~~klifEAP~k~qQ~~~I~~~G 251 (254)
+++++.++.+.++.+.. +...+.|..|++.+|+
T Consensus 331 --nPdl~~k~~~~lg~~~~--~~~~~~~~~~~~~~~~ 363 (363)
T 3l5l_A 331 --DPHWAYFAAKELGVEKA--SWTLPAPYAHWLERYR 363 (363)
T ss_dssp --CTTHHHHHHHHTTCTTG--GGGSCHHHHHHHC---
T ss_pred --CchHHHHHHHHcCCCcc--cCCCCchhHhHhhccC
Confidence 26789999999885321 2355678888877764
No 14
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=95.26 E-value=0.31 Score=43.53 Aligned_cols=129 Identities=18% Similarity=0.281 Sum_probs=88.7
Q ss_pred chhHHHHHHHhhcc-cccEEeecCcccccCChhHHHHHHHHHHhCCc----eecC-CcHHHHHHHhCCchHHHHHHHHHH
Q 025344 39 SHNVLEDIFESMGQ-FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV----YVST-GDWAEHLIRNGPSAFKEYVEDCKQ 112 (254)
Q Consensus 39 g~~~~~DlLe~ag~-yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV----~v~~-Gtl~E~a~~qg~~~~~~yl~~~k~ 112 (254)
....+..+++.+.+ -+..+.|.+|--.+.+. +.+.++.+++.+. .+.+ |+++ +++++.+++
T Consensus 51 s~e~i~~~i~~~~~~g~~~i~~tGGEPll~~~--l~~li~~~~~~~~~~~i~i~TNG~ll-----------~~~~~~L~~ 117 (340)
T 1tv8_A 51 TFDEMARIAKVYAELGVKKIRITGGEPLMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLL-----------KKHGQKLYD 117 (340)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESSCGGGSTT--HHHHHHHHTTCTTCCEEEEEECSTTH-----------HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccchhh--HHHHHHHHHhCCCCCeEEEEeCccch-----------HHHHHHHHH
Confidence 55677777765544 37889999999888875 7899999998853 3445 6543 346677788
Q ss_pred cCCCEEEecCCccc-----------CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 113 VGFDTIELNVGSLE-----------IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 113 lGF~~IEISdGti~-----------i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
.|++.|.||=-+.+ .+.+.-.+.|+.+++.|+.|...+-+-.+ .
T Consensus 118 ~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v~i~~vv~~g---~---------------------- 172 (340)
T 1tv8_A 118 AGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKG---I---------------------- 172 (340)
T ss_dssp HTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEEEEECTT---T----------------------
T ss_pred CCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCEEEEEEEeCC---C----------------------
Confidence 99999999977652 15677788999999999866555444100 0
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+.+++.+.++...+.|++..++|-
T Consensus 173 -n~~ei~~~~~~~~~~g~~~~~i~~ 196 (340)
T 1tv8_A 173 -NDDQIIPMLEYFKDKHIEIRFIEF 196 (340)
T ss_dssp -TGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred -CHHHHHHHHHHHHhcCCeEEEEEe
Confidence 122334445555678998777775
No 15
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=95.19 E-value=0.32 Score=47.82 Aligned_cols=95 Identities=21% Similarity=0.285 Sum_probs=73.2
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~ 182 (254)
.+.+++.+.+.|.+.|-|.+.+=++ +.-...|+.+++.|..|-.-+.-. . ++ .-
T Consensus 119 ~~~~ve~a~~aGvd~vrIf~s~sd~--~ni~~~i~~ak~~G~~v~~~i~~~-----~----~~---------------~~ 172 (539)
T 1rqb_A 119 VDRFVDKSAENGMDVFRVFDAMNDP--RNMAHAMAAVKKAGKHAQGTICYT-----I----SP---------------VH 172 (539)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTTCEEEEEEECC-----C----ST---------------TC
T ss_pred cHHHHHHHHhCCCCEEEEEEehhHH--HHHHHHHHHHHHCCCeEEEEEEee-----e----CC---------------CC
Confidence 7889999999999999999888777 455689999999998753323221 1 11 11
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
+++.+++.+++-.++||+.| .|+|..|-..+..+.++++.+
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I-----~L~DT~G~~~P~~v~~lv~~l 213 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSI-----ALKDMAALLKPQPAYDIIKAI 213 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEE-----EEEETTCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEE-----EeCCCCCCcCHHHHHHHHHHH
Confidence 58999999999999999855 478888988888887777543
No 16
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=95.13 E-value=0.24 Score=45.49 Aligned_cols=65 Identities=12% Similarity=0.136 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
.++++++.+.+.|.+.|.++-|.- . .++++.+++.|+++...+ .
T Consensus 110 ~~~~~~~~~~~~g~~~V~~~~g~~---~---~~~i~~~~~~g~~v~~~v----~-------------------------- 153 (369)
T 3bw2_A 110 GYDAKLAVLLDDPVPVVSFHFGVP---D---REVIARLRRAGTLTLVTA----T-------------------------- 153 (369)
T ss_dssp THHHHHHHHHHSCCSEEEEESSCC---C---HHHHHHHHHTTCEEEEEE----S--------------------------
T ss_pred cHHHHHHHHHhcCCCEEEEeCCCC---c---HHHHHHHHHCCCeEEEEC----C--------------------------
Confidence 589999999999999999987753 1 356777777776543211 0
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
+ ++.++...++|||+|++++.
T Consensus 154 -t----~~~a~~a~~~GaD~i~v~g~ 174 (369)
T 3bw2_A 154 -T----PEEARAVEAAGADAVIAQGV 174 (369)
T ss_dssp -S----HHHHHHHHHTTCSEEEEECT
T ss_pred -C----HHHHHHHHHcCCCEEEEeCC
Confidence 1 34567778999999999885
No 17
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=94.91 E-value=0.22 Score=44.50 Aligned_cols=113 Identities=19% Similarity=0.277 Sum_probs=77.3
Q ss_pred hHHHH-HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccc
Q 025344 102 AFKEY-VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (254)
Q Consensus 102 ~~~~y-l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~ 180 (254)
-++.| +++++..|-|+|=+-+. .++.++..++++.+++.|+.++.|+.-
T Consensus 122 iid~~qv~~A~~~GAD~VlLi~a--~l~~~~l~~l~~~a~~lGl~~lvev~t---------------------------- 171 (272)
T 3qja_A 122 VVQPYQIHEARAHGADMLLLIVA--ALEQSVLVSMLDRTESLGMTALVEVHT---------------------------- 171 (272)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEGG--GSCHHHHHHHHHHHHHTTCEEEEEESS----------------------------
T ss_pred ccCHHHHHHHHHcCCCEEEEecc--cCCHHHHHHHHHHHHHCCCcEEEEcCC----------------------------
Confidence 57788 99999999999998544 456777889999999999988765521
Q ss_pred ccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCC-ceEEecCCc-hhHHHHHHHhCCC
Q 025344 181 VEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE-KTMFEATNP-RTSEWFIRRYGPK 253 (254)
Q Consensus 181 ~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~-klifEAP~k-~qQ~~~I~~~Gp~ 253 (254)
.+++++.+++||++|-+-.|..-. -.+..+.+.++...++.+ -++-|.=-. ..+..-+...|.+
T Consensus 172 -------~ee~~~A~~~Gad~IGv~~r~l~~--~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~Gad 237 (272)
T 3qja_A 172 -------EQEADRALKAGAKVIGVNARDLMT--LDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGAD 237 (272)
T ss_dssp -------HHHHHHHHHHTCSEEEEESBCTTT--CCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCS
T ss_pred -------HHHHHHHHHCCCCEEEECCCcccc--cccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCC
Confidence 234455668899999998773311 123345567777777633 355565444 5566666666653
No 18
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=94.86 E-value=0.24 Score=47.70 Aligned_cols=95 Identities=18% Similarity=0.261 Sum_probs=74.2
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~ 182 (254)
++.+++.+.+.|.+.|-|.+.+-++ +.-...|+.+++.|..|..-+.--+ ++ .-
T Consensus 102 ~~~~v~~a~~~Gvd~i~if~~~sd~--~ni~~~i~~ak~~G~~v~~~i~~~~---------~~---------------~~ 155 (464)
T 2nx9_A 102 VDTFVERAVKNGMDVFRVFDAMNDV--RNMQQALQAVKKMGAHAQGTLCYTT---------SP---------------VH 155 (464)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTTCEEEEEEECCC---------CT---------------TC
T ss_pred hHHHHHHHHhCCcCEEEEEEecCHH--HHHHHHHHHHHHCCCEEEEEEEeee---------CC---------------CC
Confidence 6889999999999999999887776 4456899999999988744332211 01 01
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
|++.+++.+++-.++||+.| .|+|..|-..+..+.++++.+
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I-----~l~DT~G~~~P~~v~~lv~~l 196 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSI-----ALKDMAGILTPYAAEELVSTL 196 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEE-----EEEETTSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEE-----EEcCCCCCcCHHHHHHHHHHH
Confidence 58999999999999999866 478889999988888887654
No 19
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=94.71 E-value=0.28 Score=42.25 Aligned_cols=134 Identities=15% Similarity=0.259 Sum_probs=79.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-------cCChhHHHHHHHHHHHcCCcccceeeee-cCCCCCCCcccccccccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL-------EIPEETLLRYVRLVKSAGLKAKPKFAVM-FNKSDIPSDRDRAFGAYVAR 173 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-------~i~~~~r~~lI~~~~~~G~~v~~E~g~k-~~~s~v~~~~d~~~~~~~~~ 173 (254)
.+++.++.++++||+.||++.... .++.++..++.+.++++|+++.+ ++.- +..-.+++ .|+.
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~~~~~~~~l~~-~d~~------- 101 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPS-MCLSAHRRFPLGS-EDDA------- 101 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEE-EEEGGGGTSCTTC-SSHH-------
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEE-EecCcccCCCCCC-CCHH-------
Confidence 799999999999999999986542 45777888899999999999754 2210 00001111 1110
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHH-------HHH---HHhccCCCceEEecC-----
Q 025344 174 APRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADI-------IAK---VIGRLGLEKTMFEAT----- 238 (254)
Q Consensus 174 ~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~-------i~~---ii~~l~~~klifEAP----- 238 (254)
......+.+.+.++..-+.||..|++-+-..+. +.-+.+. +.+ +++..|+ +|.+|.-
T Consensus 102 -----~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lEn~~~~~~ 173 (295)
T 3cqj_A 102 -----VRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYY--QEANNETRRRFRDGLKESVEMASRAQV-TLAMEIMDYPLM 173 (295)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSS--SCCCHHHHHHHHHHHHHHHHHHHHHTC-EEEEECCSSGGG
T ss_pred -----HHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCc--CcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEeeCCCccc
Confidence 001124566667777778899999986432211 1112222 222 2233343 4777853
Q ss_pred -CchhHHHHHHHhCC
Q 025344 239 -NPRTSEWFIRRYGP 252 (254)
Q Consensus 239 -~k~qQ~~~I~~~Gp 252 (254)
...+-..++++.|+
T Consensus 174 ~~~~~~~~l~~~v~~ 188 (295)
T 3cqj_A 174 NSISKALGYAHYLNN 188 (295)
T ss_dssp CSHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHhcCC
Confidence 34556677887773
No 20
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=94.68 E-value=0.65 Score=41.17 Aligned_cols=70 Identities=20% Similarity=0.131 Sum_probs=49.2
Q ss_pred EEeecCcccccCChhHHHHHHHHHHhCCceecC--CcHHHHHHHhCCchHHHHHHHHHHc-CCCEEEecCCcccCChhHH
Q 025344 56 GLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST--GDWAEHLIRNGPSAFKEYVEDCKQV-GFDTIELNVGSLEIPEETL 132 (254)
Q Consensus 56 ~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~--Gtl~E~a~~qg~~~~~~yl~~~k~l-GF~~IEISdGti~i~~~~r 132 (254)
.-|||.|++.+-.+ +..++ |.| .+..+.+.++.++++ ||+.||+.-.. .. .++.
T Consensus 7 ~~~~~~~~w~~~~~--------------~~~f~~~g~~-------~~~~~~e~l~~aa~~~G~~~VEl~~~~-~~-~~~~ 63 (333)
T 3ktc_A 7 YPEFGAGLWHFANY--------------IDRYAVDGYG-------PALSTIDQINAAKEVGELSYVDLPYPF-TP-GVTL 63 (333)
T ss_dssp CCCEEEEGGGGSCC--------------CCSSSTTCSS-------CCCCHHHHHHHHHHHSSEEEEEEEESC-ST-TCCH
T ss_pred CCcceeeeeeeecc--------------cccccCCCCC-------CCCCHHHHHHHHHHhCCCCEEEecCCC-cc-hhHH
Confidence 45899999888764 22333 322 134799999999999 99999996211 11 3567
Q ss_pred HHHHHHHHHcCCcccc
Q 025344 133 LRYVRLVKSAGLKAKP 148 (254)
Q Consensus 133 ~~lI~~~~~~G~~v~~ 148 (254)
.++-+.+++.|+++..
T Consensus 64 ~~l~~~l~~~Gl~i~~ 79 (333)
T 3ktc_A 64 SEVKDALKDAGLKAIG 79 (333)
T ss_dssp HHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCeEEE
Confidence 7888889999999753
No 21
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=94.50 E-value=0.24 Score=44.41 Aligned_cols=100 Identities=9% Similarity=0.067 Sum_probs=72.9
Q ss_pred HHHHHHHHHcCCCEEEecCCccc--------CChhH----HHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 025344 104 KEYVEDCKQVGFDTIELNVGSLE--------IPEET----LLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~--------i~~~~----r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~ 171 (254)
.+.++.+.+.|++.|-|.+++-+ ++.++ -.+.|+.+++.|..|-.+++.-++. + .+
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~-e----~~------- 153 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGC-P----YD------- 153 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCB-T----TT-------
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeC-C----cC-------
Confidence 46788888899999999887744 34333 3577899999999988777764321 1 11
Q ss_pred ccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 172 ARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 172 ~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
+..|++.+++.++...++||+.|-+ .|..|-..+..+.++++.+
T Consensus 154 --------~~~~~~~~~~~~~~~~~~G~d~i~l-----~DT~G~~~P~~~~~lv~~l 197 (302)
T 2ftp_A 154 --------GDVDPRQVAWVARELQQMGCYEVSL-----GDTIGVGTAGATRRLIEAV 197 (302)
T ss_dssp --------BCCCHHHHHHHHHHHHHTTCSEEEE-----EESSSCCCHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHHHHcCCCEEEE-----eCCCCCcCHHHHHHHHHHH
Confidence 1126999999999999999998754 4677777777777777654
No 22
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=94.42 E-value=0.088 Score=44.50 Aligned_cols=131 Identities=21% Similarity=0.193 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
.+++.++.++++||+.||+... .++..+..++.+.+++.|+++.+-..-- .+.+ .|+. ...
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~----~~~~-~d~~------------~r~ 79 (275)
T 3qc0_A 19 GFAEAVDICLKHGITAIAPWRD--QVAAIGLGEAGRIVRANGLKLTGLCRGG----FFPA-PDAS------------GRE 79 (275)
T ss_dssp CHHHHHHHHHHTTCCEEECBHH--HHHHHCHHHHHHHHHHHTCEESCEEEEE----CCCC-SSHH------------HHH
T ss_pred CHHHHHHHHHHcCCCEEEeccc--cccccCHHHHHHHHHHcCCceEEeecCC----CcCC-CCHH------------HHH
Confidence 7899999999999999999764 2346677888999999999976532211 1111 1211 001
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEecccccccCCCcc-------HHHHHHH---HhccCCCceEEecC------------C
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLR-------ADIIAKV---IGRLGLEKTMFEAT------------N 239 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r-------~d~i~~i---i~~l~~~klifEAP------------~ 239 (254)
...+.+.+.++..-+.||..|++-+-..... +.-. .+.+.++ ++..|+ +|.+|.- .
T Consensus 80 ~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~-~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lE~~~~~~~~~~~~~~~ 157 (275)
T 3qc0_A 80 KAIDDNRRAVDEAAELGADCLVLVAGGLPGG-SKNIDAARRMVVEGIAAVLPHARAAGV-PLAIEPLHPMYAADRACVNT 157 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEECBCCCTT-CCCHHHHHHHHHHHHHHHHHHHHHHTC-CEEECCCCGGGTTTTBSCCC
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeeCCCCCC-CcCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEeECCCcccCCccccCC
Confidence 1245555666666678999999976322111 1111 1223333 334455 5888851 3
Q ss_pred chhHHHHHHHhCCC
Q 025344 240 PRTSEWFIRRYGPK 253 (254)
Q Consensus 240 k~qQ~~~I~~~Gp~ 253 (254)
..+-..++++.+++
T Consensus 158 ~~~~~~l~~~~~~~ 171 (275)
T 3qc0_A 158 LGQALDICETLGPG 171 (275)
T ss_dssp HHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCcc
Confidence 45566788887763
No 23
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=94.38 E-value=0.15 Score=45.89 Aligned_cols=142 Identities=14% Similarity=0.121 Sum_probs=99.6
Q ss_pred ccEEeecCcccccCCh-----------hHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 025344 54 VDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (254)
Q Consensus 54 ID~lKfg~GT~~l~~~-----------~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISd 122 (254)
+|.+-+-..+|-+..+ +.+++-++.++++|..|..+- |.+-.-.++.+-++.+.+.++|.+.|-+.|
T Consensus 94 ~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~--~d~~~~~~~~~~~~~~~~~~~G~~~i~l~D 171 (293)
T 3ewb_X 94 SPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSP--EDATRSDRAFLIEAVQTAIDAGATVINIPD 171 (293)
T ss_dssp SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEE--ETGGGSCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEe--ccCCCCCHHHHHHHHHHHHHcCCCEEEecC
Confidence 5666665555544321 236788899999999776532 223334455677888889999999999999
Q ss_pred CcccCChhHHHHHHHHHHHcCCcc--cceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCc
Q 025344 123 GSLEIPEETLLRYVRLVKSAGLKA--KPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD 200 (254)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~G~~v--~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~ 200 (254)
-.--+.+.+-.++|+.+++. +.- ...++.- +-.|...-+..+...++|||+
T Consensus 172 T~G~~~P~~v~~lv~~l~~~-~~~~~~~~l~~H--------------------------~Hnd~Gla~AN~laA~~aGa~ 224 (293)
T 3ewb_X 172 TVGYTNPTEFGQLFQDLRRE-IKQFDDIIFASH--------------------------CHDDLGMATANALAAIENGAR 224 (293)
T ss_dssp SSSCCCHHHHHHHHHHHHHH-CTTGGGSEEEEE--------------------------CBCTTSCHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHh-cCCccCceEEEE--------------------------eCCCcChHHHHHHHHHHhCCC
Confidence 99999999999999999884 110 0113331 111233447788889999999
Q ss_pred EEEEecc--cccccCCCccHHHHHHHHh
Q 025344 201 MIMIDSD--DVCKHADSLRADIIAKVIG 226 (254)
Q Consensus 201 ~ViiEar--gi~d~~g~~r~d~i~~ii~ 226 (254)
++++- |+=...||..++.+-..+.
T Consensus 225 --~vd~sv~GlGeraGN~~~E~vv~~L~ 250 (293)
T 3ewb_X 225 --RVEGTINGIGERAGNTALEEVAVALH 250 (293)
T ss_dssp --EEEEBGGGCCTTTCBCBHHHHHHHHH
T ss_pred --EEEeeccccccccccHhHHHHHHHHH
Confidence 45775 8888999999887766664
No 24
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=94.37 E-value=0.21 Score=44.35 Aligned_cols=102 Identities=12% Similarity=0.146 Sum_probs=77.5
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHH
Q 025344 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~ 186 (254)
+.+++..|-|+|=+.-. .++.++..++++.+++.|+.++.|+.-
T Consensus 116 i~ea~~~GAD~ilLi~a--~l~~~~l~~l~~~a~~lGl~~lvEv~~---------------------------------- 159 (251)
T 1i4n_A 116 VKLASSVGADAILIIAR--ILTAEQIKEIYEAAEELGMDSLVEVHS---------------------------------- 159 (251)
T ss_dssp HHHHHHTTCSEEEEEGG--GSCHHHHHHHHHHHHTTTCEEEEEECS----------------------------------
T ss_pred HHHHHHcCCCEEEEecc--cCCHHHHHHHHHHHHHcCCeEEEEeCC----------------------------------
Confidence 45589999999999877 367789999999999999999998864
Q ss_pred HHHHHHHHHHc-CCcEEEEecccccccCCCccHHHHHHHHhccCCCc-eEEecCCc-hhHHHHH
Q 025344 187 LIRRAERCLEA-GADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEK-TMFEATNP-RTSEWFI 247 (254)
Q Consensus 187 ~i~~~~~dLeA-GA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~k-lifEAP~k-~qQ~~~I 247 (254)
.+.+++.+++ |+++|-|+-|++-.- .+.-+...+++..++.+. +|-|+=-. ..+...+
T Consensus 160 -~eE~~~A~~l~g~~iIGinnr~l~t~--~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~ 220 (251)
T 1i4n_A 160 -REDLEKVFSVIRPKIIGINTRDLDTF--EIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDL 220 (251)
T ss_dssp -HHHHHHHHTTCCCSEEEEECBCTTTC--CBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHH
T ss_pred -HHHHHHHHhcCCCCEEEEeCcccccC--CCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHH
Confidence 4557888999 999999999987332 444566777888888654 55576543 3444333
No 25
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=94.36 E-value=0.54 Score=41.80 Aligned_cols=131 Identities=19% Similarity=0.145 Sum_probs=90.3
Q ss_pred chhHHHHHHHhhcc-cccEEeecCcccccCChhHHHHHHHHHHhCCceecC-CcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 025344 39 SHNVLEDIFESMGQ-FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (254)
Q Consensus 39 g~~~~~DlLe~ag~-yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~-Gtl~E~a~~qg~~~~~~yl~~~k~lGF~ 116 (254)
.+..+.+.++.+.+ -+..+-|.+|...+++.+.+.+.++.+++.++.+.. .+. .-++.++.+++.|++
T Consensus 85 s~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~----------l~~e~l~~L~~ag~~ 154 (348)
T 3iix_A 85 TPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLGE----------WPREYYEKWKEAGAD 154 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECCC----------CCHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecCC----------CCHHHHHHHHHhCCC
Confidence 34455555544333 277888999996677766799999999999887763 221 236778888999999
Q ss_pred EEEecCCcc----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHH
Q 025344 117 TIELNVGSL----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (254)
Q Consensus 117 ~IEISdGti----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~ 186 (254)
.+-+|--+. .-+.+++.+.|+.+++.|+.+.+ +.-.+. + + ++.++
T Consensus 155 ~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~--~~i~G~--p---~------------------et~e~ 209 (348)
T 3iix_A 155 RYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGA--GSMVGL--P---G------------------QTIDD 209 (348)
T ss_dssp EEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEE--CBEESC--T---T------------------CCHHH
T ss_pred EEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeecc--ceEEeC--C---C------------------CCHHH
Confidence 998875544 23778999999999999986443 332221 0 0 13677
Q ss_pred HHHHHHHHHHcCCcEEEE
Q 025344 187 LIRRAERCLEAGADMIMI 204 (254)
Q Consensus 187 ~i~~~~~dLeAGA~~Vii 204 (254)
+.+.+....+.|++.|-+
T Consensus 210 ~~~~~~~l~~l~~~~i~i 227 (348)
T 3iix_A 210 LVDDLLFLKEHDFDMVGI 227 (348)
T ss_dssp HHHHHHHHHHHTCSEECC
T ss_pred HHHHHHHHHhcCCCEEee
Confidence 777777777778887654
No 26
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=94.34 E-value=0.56 Score=42.18 Aligned_cols=78 Identities=8% Similarity=0.089 Sum_probs=49.5
Q ss_pred hHHHHHHHhhcccccEEeecCcccc------cCChhHHHHHHHHHHhC----------Ccee----cCCcHHHHHHHhCC
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSHS------LMPKPFIEEVVKRAHQH----------DVYV----STGDWAEHLIRNGP 100 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~~------l~~~~~l~eKi~l~~~~----------gV~v----~~Gtl~E~a~~qg~ 100 (254)
..+.+..+.+.++.|++=+-+++-. +...+.+.+.++-.++. ++++ .++ |- .
T Consensus 153 ~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~-~~-----~-- 224 (336)
T 1f76_A 153 DDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD-LS-----E-- 224 (336)
T ss_dssp HHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC-CC-----H--
T ss_pred HHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC-CC-----H--
Confidence 4455555555668898877776533 33345556666666543 4544 333 21 1
Q ss_pred chHHHHHHHHHHcCCCEEEecCCccc
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGSLE 126 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~ 126 (254)
+.+.++.+.+.+.|.|+|.+|+++..
T Consensus 225 ~~~~~~a~~l~~~Gvd~i~vsn~~~~ 250 (336)
T 1f76_A 225 EELIQVADSLVRHNIDGVIATNTTLD 250 (336)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCBCC
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCccc
Confidence 14677788999999999999998753
No 27
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=94.30 E-value=0.19 Score=45.50 Aligned_cols=156 Identities=10% Similarity=0.102 Sum_probs=104.6
Q ss_pred hHHHHHHHhhcccccEEeecCcccccCCh-----------hHHHHHHHHHHhCCceec------CCcHHHHHHHhCCchH
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVS------TGDWAEHLIRNGPSAF 103 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~~l~~~-----------~~l~eKi~l~~~~gV~v~------~Gtl~E~a~~qg~~~~ 103 (254)
..++..+++- +|.+-+...+|-.+.+ +.+++-++.++++|+.|. .|--++- .-.++.+
T Consensus 85 ~~i~~a~~~g---~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~--~~~~~~~ 159 (307)
T 1ydo_A 85 RGLENALEGG---INEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEK--DVPIEQV 159 (307)
T ss_dssp HHHHHHHHHT---CSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTB--CCCHHHH
T ss_pred HhHHHHHhCC---cCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCC--CCCHHHH
Confidence 4555555543 5666666655543211 336788999999999884 2321211 2233466
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccC
Q 025344 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVED 183 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d 183 (254)
.++++.+.++|.+.|=|.|-.--+.+.+-.++|+.+++. +. -..++.- +-.|
T Consensus 160 ~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~-~~-~~~l~~H--------------------------~Hnd 211 (307)
T 1ydo_A 160 IRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLAR-FP-ANQIALH--------------------------FHDT 211 (307)
T ss_dssp HHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTT-SC-GGGEEEE--------------------------CBGG
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHh-CC-CCeEEEE--------------------------ECCC
Confidence 777778889999999999988888999989999999884 21 1134441 1112
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecc--cccc------cCCCccHHHHHHHHhccCCC
Q 025344 184 VDLLIRRAERCLEAGADMIMIDSD--DVCK------HADSLRADIIAKVIGRLGLE 231 (254)
Q Consensus 184 ~~~~i~~~~~dLeAGA~~ViiEar--gi~d------~~g~~r~d~i~~ii~~l~~~ 231 (254)
...-+..+...++|||+.| ++- |+=. ..||..++.+-..+...|.+
T Consensus 212 ~Gla~AN~laAv~aGa~~v--d~tv~GlGecp~a~graGN~~~E~lv~~L~~~g~~ 265 (307)
T 1ydo_A 212 RGTALANMVTALQMGITVF--DGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMDIK 265 (307)
T ss_dssp GSCHHHHHHHHHHHTCCEE--EEBGGGCCEETTEEEEECBCBHHHHHHHHHHTTCB
T ss_pred CchHHHHHHHHHHhCCCEE--EEcccccCCCCCCCCCCCChhHHHHHHHHHhcCCC
Confidence 3344778888999999865 554 7755 78999988887777766643
No 28
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=94.24 E-value=0.5 Score=41.48 Aligned_cols=74 Identities=9% Similarity=0.061 Sum_probs=52.3
Q ss_pred hhHHHHHHHhhc--ccccEEeecCccc--------ccCChhHHHHHHHHHHhC-Cceec----CCcHHHHHHHhCCchHH
Q 025344 40 HNVLEDIFESMG--QFVDGLKFSGGSH--------SLMPKPFIEEVVKRAHQH-DVYVS----TGDWAEHLIRNGPSAFK 104 (254)
Q Consensus 40 ~~~~~DlLe~ag--~yID~lKfg~GT~--------~l~~~~~l~eKi~l~~~~-gV~v~----~Gtl~E~a~~qg~~~~~ 104 (254)
+..+.+..+.+- ...|++-+.+++. ...+.+.+.+.++.+++. ++++. ++ + ..+.
T Consensus 110 ~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~-~---------~~~~ 179 (311)
T 1ep3_A 110 EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPN-V---------TDIV 179 (311)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSC-S---------SCSH
T ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC-h---------HHHH
Confidence 345555555555 5789988877643 234567788999988887 77544 33 2 2567
Q ss_pred HHHHHHHHcCCCEEEecCC
Q 025344 105 EYVEDCKQVGFDTIELNVG 123 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdG 123 (254)
++.+.+.+.|.++|-++++
T Consensus 180 ~~a~~l~~~G~d~i~v~~~ 198 (311)
T 1ep3_A 180 PIAKAVEAAGADGLTMINT 198 (311)
T ss_dssp HHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEEeCC
Confidence 7888999999999999874
No 29
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=94.11 E-value=0.21 Score=42.34 Aligned_cols=102 Identities=11% Similarity=0.114 Sum_probs=75.6
Q ss_pred HHHHHHHhhccc-ccEEeecCcc-----------cccCChhHHHHHHHHHHhCCceecC-CcHHHHHHHhCCchHHHHHH
Q 025344 42 VLEDIFESMGQF-VDGLKFSGGS-----------HSLMPKPFIEEVVKRAHQHDVYVST-GDWAEHLIRNGPSAFKEYVE 108 (254)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GT-----------~~l~~~~~l~eKi~l~~~~gV~v~~-Gtl~E~a~~qg~~~~~~yl~ 108 (254)
.+++.++.+.+. .|.+=+.... ...++++.+++.-++++++|+.++. +.+.. ...+.+++.++
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~----~~~~~~~~~i~ 98 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVA----EKSSDWEKMFK 98 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECC----SSTTHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCC----ccHHHHHHHHH
Confidence 355666655555 7888877543 1234556689999999999998775 33322 23457999999
Q ss_pred HHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 025344 109 DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 109 ~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
.|+.+|.+.|-+.-| .+.+.++.+.+++.|.++.-|-.-
T Consensus 99 ~A~~lGa~~v~~~~~-----~~~~~~l~~~a~~~gv~l~~En~~ 137 (262)
T 3p6l_A 99 FAKAMDLEFITCEPA-----LSDWDLVEKLSKQYNIKISVHNHP 137 (262)
T ss_dssp HHHHTTCSEEEECCC-----GGGHHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHcCCCEEEecCC-----HHHHHHHHHHHHHhCCEEEEEeCC
Confidence 999999999999865 467789999999999998877764
No 30
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=94.09 E-value=0.27 Score=41.75 Aligned_cols=92 Identities=8% Similarity=0.107 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc------cCChhHHHHHHHHHHHcCCcccceeeeecCC-CCCCCccccccccccccC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNK-SDIPSDRDRAFGAYVARA 174 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~-s~v~~~~d~~~~~~~~~~ 174 (254)
.+++.++.++++||++||+..... .++.++..++.+.++++|+++.+ +..-.+. -.+.+ .|+.
T Consensus 13 ~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~~~~~l~~-~~~~-------- 82 (285)
T 1qtw_A 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQ-ILPHDSYLINLGH-PVTE-------- 82 (285)
T ss_dssp CHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGG-BCCBCCTTCCTTC-SSHH--------
T ss_pred CHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCcee-EEecCCcccccCC-CCHH--------
Confidence 588999999999999999953322 35667888899999999998511 1110000 01111 1110
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 175 ~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
......+.+.+.++..-+.||..|.+-.-
T Consensus 83 ----~r~~~~~~~~~~i~~A~~lGa~~v~~~~g 111 (285)
T 1qtw_A 83 ----ALEKSRDAFIDEMQRCEQLGLSLLNFHPG 111 (285)
T ss_dssp ----HHHHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ----HHHHHHHHHHHHHHHHHHcCCCEEEECcC
Confidence 00123455666666677789999988653
No 31
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=94.06 E-value=0.57 Score=40.74 Aligned_cols=132 Identities=14% Similarity=0.148 Sum_probs=75.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccc-cccccccccC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRD-RAFGAYVARA 174 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d-~~~~~~~~~~ 174 (254)
.+.+.++.++++||++||+.... ..++.++..++-+.+++.|+++++=.+. .. -.+.+ .| +.
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~-~~-~nl~s-~d~~~-------- 87 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAP-YI-INIGN-TTNLD-------- 87 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECC-TT-CCTTC-SSCHH--------
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEecc-cc-ccCCC-CCcHH--------
Confidence 68899999999999999994322 1344677778888999999953321111 00 01111 11 10
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHh---ccC----CCceEEecC---------
Q 025344 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG---RLG----LEKTMFEAT--------- 238 (254)
Q Consensus 175 ~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~---~l~----~~klifEAP--------- 238 (254)
....+.+.+.+.++.+-+.||..|++-.-... +.-+.+..+.+++ .+. -=+|.+|.-
T Consensus 88 ----~r~~~~~~~~~~i~~A~~lGa~~vv~h~g~~~---~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~~~~~~ 160 (303)
T 3aal_A 88 ----TFSLGVDFLRAEIERTEAIGAKQLVLHPGAHV---GAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECGR 160 (303)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTCSEEEECCEECT---TSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCTTEECS
T ss_pred ----HHHHHHHHHHHHHHHHHHcCCCEEEECCCcCC---CCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCccCC
Confidence 01123566677777777889999988653211 1122233333322 221 136888875
Q ss_pred CchhHHHHHHHhC
Q 025344 239 NPRTSEWFIRRYG 251 (254)
Q Consensus 239 ~k~qQ~~~I~~~G 251 (254)
...+-..+|...+
T Consensus 161 t~~~~~~li~~v~ 173 (303)
T 3aal_A 161 TFEELAYIIDGVA 173 (303)
T ss_dssp SHHHHHHHHHHCT
T ss_pred CHHHHHHHHHhcC
Confidence 3445566888777
No 32
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.02 E-value=0.28 Score=43.60 Aligned_cols=99 Identities=10% Similarity=0.075 Sum_probs=68.6
Q ss_pred HHHHHHHHcCCCEEEecCCcc--------cCChhH----HHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccc
Q 025344 105 EYVEDCKQVGFDTIELNVGSL--------EIPEET----LLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVA 172 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti--------~i~~~~----r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~ 172 (254)
+-++.+.+.|++.|-|+..+- ..+.++ -.+.|+.+++.|+.|-.+++.-++. .|.
T Consensus 83 ~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~------e~~------- 149 (295)
T 1ydn_A 83 KGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVEC------PYD------- 149 (295)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEE------TTT-------
T ss_pred HHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecC------CcC-------
Confidence 456788889999999986332 344433 2456899999999997777763221 110
Q ss_pred cCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 173 RAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 173 ~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
+..+++.+++.++...++||+.|-+= |..|...+..+.++++.+
T Consensus 150 -------~~~~~~~~~~~~~~~~~~G~d~i~l~-----Dt~G~~~P~~~~~lv~~l 193 (295)
T 1ydn_A 150 -------GPVTPQAVASVTEQLFSLGCHEVSLG-----DTIGRGTPDTVAAMLDAV 193 (295)
T ss_dssp -------EECCHHHHHHHHHHHHHHTCSEEEEE-----ETTSCCCHHHHHHHHHHH
T ss_pred -------CCCCHHHHHHHHHHHHhcCCCEEEec-----CCCCCcCHHHHHHHHHHH
Confidence 11269999999999999999987653 666777777766666543
No 33
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=93.87 E-value=0.21 Score=43.35 Aligned_cols=85 Identities=14% Similarity=0.200 Sum_probs=61.2
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHH
Q 025344 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~ 186 (254)
++++.+.|.|.|-+.. +.-.+++...++++.+++.|+.+..++.-
T Consensus 94 i~~~~~aGad~I~l~~-~~~~~p~~l~~~i~~~~~~g~~v~~~v~t---------------------------------- 138 (229)
T 3q58_A 94 VDALAQAGADIIAFDA-SFRSRPVDIDSLLTRIRLHGLLAMADCST---------------------------------- 138 (229)
T ss_dssp HHHHHHHTCSEEEEEC-CSSCCSSCHHHHHHHHHHTTCEEEEECSS----------------------------------
T ss_pred HHHHHHcCCCEEEECc-cccCChHHHHHHHHHHHHCCCEEEEecCC----------------------------------
Confidence 6778999999997654 44445567779999999988877664321
Q ss_pred HHHHHHHHHHcCCcEEEEeccccccc--CCCccHHHHHHHHhc
Q 025344 187 LIRRAERCLEAGADMIMIDSDDVCKH--ADSLRADIIAKVIGR 227 (254)
Q Consensus 187 ~i~~~~~dLeAGA~~ViiEargi~d~--~g~~r~d~i~~ii~~ 227 (254)
.+.+++..++||++|.+..+|.... ......+++.++.+.
T Consensus 139 -~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~ 180 (229)
T 3q58_A 139 -VNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA 180 (229)
T ss_dssp -HHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT
T ss_pred -HHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc
Confidence 5667788999999998877765432 233456778887764
No 34
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=93.84 E-value=0.33 Score=46.67 Aligned_cols=93 Identities=14% Similarity=0.182 Sum_probs=75.7
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHH
Q 025344 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~ 186 (254)
+.+++..|-|+|=+.... ++.++..++++.+++.|+.++.|++-
T Consensus 123 i~ea~~~GAD~ILLi~a~--l~~~~l~~l~~~a~~lgm~~LvEvh~---------------------------------- 166 (452)
T 1pii_A 123 IYLARYYQADACLLMLSV--LDDDQYRQLAAVAHSLEMGVLTEVSN---------------------------------- 166 (452)
T ss_dssp HHHHHHTTCSEEEEETTT--CCHHHHHHHHHHHHHTTCEEEEEECS----------------------------------
T ss_pred HHHHHHcCCCEEEEEccc--CCHHHHHHHHHHHHHcCCeEEEEeCC----------------------------------
Confidence 455899999999998885 66788999999999999999998865
Q ss_pred HHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCc-eEEecC
Q 025344 187 LIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEK-TMFEAT 238 (254)
Q Consensus 187 ~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~k-lifEAP 238 (254)
.+++++.+++||++|-|+-|++-. -+++-+...+++..+|.+. +|-|+=
T Consensus 167 -~eE~~~A~~lga~iIGinnr~L~t--~~~dl~~~~~L~~~ip~~~~vIaEsG 216 (452)
T 1pii_A 167 -EEEQERAIALGAKVVGINNRDLRD--LSIDLNRTRELAPKLGHNVTVISESG 216 (452)
T ss_dssp -HHHHHHHHHTTCSEEEEESEETTT--TEECTHHHHHHHHHHCTTSEEEEESC
T ss_pred -HHHHHHHHHCCCCEEEEeCCCCCC--CCCCHHHHHHHHHhCCCCCeEEEECC
Confidence 567788899999999999998733 3555677788888887553 566765
No 35
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=93.79 E-value=0.27 Score=42.20 Aligned_cols=89 Identities=15% Similarity=0.203 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~ 180 (254)
.+++.++.++++||+.||+....+ .++.++..++-+.+++.|+++..-.+... .-.+.+ .|++ ..
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~-~~~l~~-~d~~------------~r 83 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPSA-EQNLSS-PDPD------------IR 83 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCCG-GGCTTC-SCHH------------HH
T ss_pred CHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCCC-CcCCCC-CCHH------------HH
Confidence 689999999999999999997643 56788889999999999999876222110 001111 1111 00
Q ss_pred ccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 181 VEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 181 ~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
....+.+.+.++..-+.||..|.+
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~ 107 (294)
T 3vni_A 84 KNAKAFYTDLLKRLYKLDVHLIGG 107 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeeec
Confidence 112455566666666789999975
No 36
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=93.74 E-value=0.82 Score=41.50 Aligned_cols=129 Identities=12% Similarity=0.066 Sum_probs=86.6
Q ss_pred chhHHHHHHHhhcc-cccEEeecCcc--cccCChhHHHHHHHHHHhCCceec--CCcHHHHHHHhCCchHHHHHHHHHHc
Q 025344 39 SHNVLEDIFESMGQ-FVDGLKFSGGS--HSLMPKPFIEEVVKRAHQHDVYVS--TGDWAEHLIRNGPSAFKEYVEDCKQV 113 (254)
Q Consensus 39 g~~~~~DlLe~ag~-yID~lKfg~GT--~~l~~~~~l~eKi~l~~~~gV~v~--~Gtl~E~a~~qg~~~~~~yl~~~k~l 113 (254)
.+..+.+.++.+.+ -++-+-|++|+ -...+.+.+.+.++.+++.|+.++ +|. .-++.++.+++.
T Consensus 100 s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~~t~G~-----------l~~e~l~~L~~a 168 (369)
T 1r30_A 100 EVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGT-----------LSESQAQRLANA 168 (369)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEEEECSS-----------CCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCC-----------CCHHHHHHHHHC
Confidence 44555555544322 26777787765 334566779999999999988654 242 236778888999
Q ss_pred CCCEEEecCCcc---------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCH
Q 025344 114 GFDTIELNVGSL---------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDV 184 (254)
Q Consensus 114 GF~~IEISdGti---------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~ 184 (254)
|++.|-||=.+- .-+.+++.+.|+.+++.|+.+. ++.-.+. . ++.
T Consensus 169 Gvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~--~~~I~Gl------~------------------et~ 222 (369)
T 1r30_A 169 GLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVC--SGGIVGL------G------------------ETV 222 (369)
T ss_dssp CCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEE--CCEEECS------S------------------CCH
T ss_pred CCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeee--eeeEeeC------C------------------CCH
Confidence 999999886551 1456889999999999998654 3443221 1 136
Q ss_pred HHHHHHHHHHHHcC--CcEEEE
Q 025344 185 DLLIRRAERCLEAG--ADMIMI 204 (254)
Q Consensus 185 ~~~i~~~~~dLeAG--A~~Vii 204 (254)
+++++.++.-.+.| .+.|-+
T Consensus 223 ed~~~~l~~l~~l~~~~~~i~~ 244 (369)
T 1r30_A 223 KDRAGLLLQLANLPTPPESVPI 244 (369)
T ss_dssp HHHHHHHHHHHSSSSCCSEEEE
T ss_pred HHHHHHHHHHHhhcCCCCEEEe
Confidence 77777777777777 666554
No 37
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=93.67 E-value=1.1 Score=40.30 Aligned_cols=108 Identities=10% Similarity=0.094 Sum_probs=82.4
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHH
Q 025344 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~ 186 (254)
+.+++..|-|+|=+..- .++.++..++++.+++.|+.++.|++-
T Consensus 135 i~ea~~~GAD~VlLi~a--~L~~~~l~~l~~~a~~lGl~~lvevh~---------------------------------- 178 (272)
T 3tsm_A 135 VYEARSWGADCILIIMA--SVDDDLAKELEDTAFALGMDALIEVHD---------------------------------- 178 (272)
T ss_dssp HHHHHHTTCSEEEEETT--TSCHHHHHHHHHHHHHTTCEEEEEECS----------------------------------
T ss_pred HHHHHHcCCCEEEEccc--ccCHHHHHHHHHHHHHcCCeEEEEeCC----------------------------------
Confidence 66789999999999766 457888899999999999999988743
Q ss_pred HHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCC-ceEEecCC-chhHHHHHHHhCCC
Q 025344 187 LIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE-KTMFEATN-PRTSEWFIRRYGPK 253 (254)
Q Consensus 187 ~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~-klifEAP~-k~qQ~~~I~~~Gp~ 253 (254)
.+++++.+++||++|=|..|.+.. -.+.-+...+++..++.+ -+|-|.=- ...+...+...|.+
T Consensus 179 -~eEl~~A~~~ga~iIGinnr~l~t--~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~ 244 (272)
T 3tsm_A 179 -EAEMERALKLSSRLLGVNNRNLRS--FEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIG 244 (272)
T ss_dssp -HHHHHHHTTSCCSEEEEECBCTTT--CCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCC
T ss_pred -HHHHHHHHhcCCCEEEECCCCCcc--CCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCC
Confidence 455677889999999998886522 234566777888888754 45677764 55666777777754
No 38
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=93.63 E-value=1 Score=43.30 Aligned_cols=149 Identities=11% Similarity=0.149 Sum_probs=104.5
Q ss_pred HHHHHhh-cccccEEeecCcccccCChhHHHHHHHHHHhCCceec-----CCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 025344 44 EDIFESM-GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS-----TGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (254)
Q Consensus 44 ~DlLe~a-g~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~-----~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~ 117 (254)
+..++.+ ..=+|.+-+-..++-+ +.+++-|+.++++|..+. ..+. ..+++.+-+..+.+.+.|.+.
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~---~ni~~~i~~ak~~G~~v~~~i~~~~~~-----~~~~e~~~~~a~~l~~~Gad~ 174 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDV---RNMQQALQAVKKMGAHAQGTLCYTTSP-----VHNLQTWVDVAQQLAELGVDS 174 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCT---HHHHHHHHHHHHTTCEEEEEEECCCCT-----TCCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCcCEEEEEEecCHH---HHHHHHHHHHHHCCCEEEEEEEeeeCC-----CCCHHHHHHHHHHHHHCCCCE
Confidence 3344433 3448888877665555 459999999999999762 2221 124446677777888999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHc
Q 025344 118 IELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEA 197 (254)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeA 197 (254)
|=|.|-.--+.+.+-.++|+.+++. +. ..+++-+ +. |...-+..+...++|
T Consensus 175 I~l~DT~G~~~P~~v~~lv~~l~~~-~~--~~i~~H~-Hn-------------------------d~GlAvAN~laAv~A 225 (464)
T 2nx9_A 175 IALKDMAGILTPYAAEELVSTLKKQ-VD--VELHLHC-HS-------------------------TAGLADMTLLKAIEA 225 (464)
T ss_dssp EEEEETTSCCCHHHHHHHHHHHHHH-CC--SCEEEEE-CC-------------------------TTSCHHHHHHHHHHT
T ss_pred EEEcCCCCCcCHHHHHHHHHHHHHh-cC--CeEEEEE-CC-------------------------CCChHHHHHHHHHHh
Confidence 9999988888888888999999885 22 2234311 11 223347788888999
Q ss_pred CCcEEEEecc--cccccCCCccHHHHHHHHhccCCC
Q 025344 198 GADMIMIDSD--DVCKHADSLRADIIAKVIGRLGLE 231 (254)
Q Consensus 198 GA~~ViiEar--gi~d~~g~~r~d~i~~ii~~l~~~ 231 (254)
||+.| ++- |+=...||...+.+-..+...+.+
T Consensus 226 Ga~~V--D~ti~g~gertGN~~lE~lv~~L~~~g~~ 259 (464)
T 2nx9_A 226 GVDRV--DTAISSMSGTYGHPATESLVATLQGTGYD 259 (464)
T ss_dssp TCSEE--EEBCGGGCSTTSCCBHHHHHHHHTTSTTC
T ss_pred CCCEE--EEeccccCCCCcCHHHHHHHHHHHhcCCC
Confidence 99955 664 887889999998887777766643
No 39
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=93.63 E-value=1.1 Score=39.84 Aligned_cols=105 Identities=10% Similarity=0.120 Sum_probs=75.0
Q ss_pred chhHHHHHHHhhcc-cccEEeecCccc-ccCChhHHH--------------HHHHHHHhCC--ceecCCcHHHHHHHhCC
Q 025344 39 SHNVLEDIFESMGQ-FVDGLKFSGGSH-SLMPKPFIE--------------EVVKRAHQHD--VYVSTGDWAEHLIRNGP 100 (254)
Q Consensus 39 g~~~~~DlLe~ag~-yID~lKfg~GT~-~l~~~~~l~--------------eKi~l~~~~g--V~v~~Gtl~E~a~~qg~ 100 (254)
.+..+.+++...-+ =.|++=+|.=-| .+.+-..++ .-.++.++.- +++..=|++...+..|
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G- 104 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYG- 104 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhh-
Confidence 34777777776655 489999997443 233333344 3334444332 3333337888888886
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccccee
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~ 150 (254)
+++|++.|++.|.+.+=|-| +|.++..++.+.++++|+.+++=+
T Consensus 105 --~e~F~~~~~~aGvdG~IipD----LP~eE~~~~~~~~~~~Gl~~I~lv 148 (252)
T 3tha_A 105 --LEKFVKKAKSLGICALIVPE----LSFEESDDLIKECERYNIALITLV 148 (252)
T ss_dssp --HHHHHHHHHHTTEEEEECTT----CCGGGCHHHHHHHHHTTCEECEEE
T ss_pred --HHHHHHHHHHcCCCEEEeCC----CCHHHHHHHHHHHHHcCCeEEEEe
Confidence 89999999999999999887 888899999999999999876644
No 40
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=93.53 E-value=1.4 Score=39.47 Aligned_cols=112 Identities=21% Similarity=0.240 Sum_probs=86.8
Q ss_pred HHHH-HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 103 FKEY-VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 103 ~~~y-l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
+|+| +.+++.+|=|+|=+-... ++.++..++++.+++.||.|+.|+.-
T Consensus 114 id~yQI~eAr~~GADaILLI~a~--L~~~~l~~l~~~A~~lGl~~LvEVh~----------------------------- 162 (258)
T 4a29_A 114 VKESQIDDAYNLGADTVLLIVKI--LTERELESLLEYARSYGMEPLILIND----------------------------- 162 (258)
T ss_dssp CSHHHHHHHHHHTCSEEEEEGGG--SCHHHHHHHHHHHHHTTCCCEEEESS-----------------------------
T ss_pred ccHHHHHHHHHcCCCeeehHHhh--cCHHHHHHHHHHHHHHhHHHHHhcch-----------------------------
Confidence 5565 788999999999765543 57888899999999999999999865
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCce-EEecC-CchhHHHHHHHhCCC
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKT-MFEAT-NPRTSEWFIRRYGPK 253 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~kl-ifEAP-~k~qQ~~~I~~~Gp~ 253 (254)
-+++++.+++||+.|-|..|.+ .+-++.-+...+++..+|.+.+ |-|.= ....+...++..|.|
T Consensus 163 ------~~El~rAl~~~a~iIGINNRnL--~tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~ 228 (258)
T 4a29_A 163 ------ENDLDIALRIGARFIGIMSRDF--ETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVN 228 (258)
T ss_dssp ------HHHHHHHHHTTCSEEEECSBCT--TTCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCC
T ss_pred ------HHHHHHHhcCCCcEEEEeCCCc--cccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCC
Confidence 4556778999999999999866 2345667778889899987765 55655 345667778888765
No 41
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=93.52 E-value=0.82 Score=41.73 Aligned_cols=165 Identities=12% Similarity=0.111 Sum_probs=109.7
Q ss_pred ceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHH
Q 025344 26 VTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKE 105 (254)
Q Consensus 26 lT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~ 105 (254)
+.++..|+... ...++...++ -+|.+-+.. .+...+..++-++.++++|+.+... +|.+..-.++.+.+
T Consensus 85 i~~l~~p~~~~---~~~i~~a~~a---Gvd~v~I~~---~~s~~~~~~~~i~~ak~~G~~v~~~--~~~a~~~~~e~~~~ 153 (345)
T 1nvm_A 85 IATLLLPGIGS---VHDLKNAYQA---GARVVRVAT---HCTEADVSKQHIEYARNLGMDTVGF--LMMSHMIPAEKLAE 153 (345)
T ss_dssp EEEEECBTTBC---HHHHHHHHHH---TCCEEEEEE---ETTCGGGGHHHHHHHHHHTCEEEEE--EESTTSSCHHHHHH
T ss_pred EEEEecCCccc---HHHHHHHHhC---CcCEEEEEE---eccHHHHHHHHHHHHHHCCCEEEEE--EEeCCCCCHHHHHH
Confidence 44444566421 2344444443 577776642 2333356899999999999966543 12223334456788
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHH
Q 025344 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVD 185 (254)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~ 185 (254)
..+.+.+.|.+.|=+.|-+-.+.+.+-.++|+.++++ +.....+++-+ + .|..
T Consensus 154 ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~-~~~~~pi~~H~-H-------------------------n~~G 206 (345)
T 1nvm_A 154 QGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAV-LKPETQVGMHA-H-------------------------HNLS 206 (345)
T ss_dssp HHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHH-SCTTSEEEEEC-B-------------------------CTTS
T ss_pred HHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHh-cCCCceEEEEE-C-------------------------CCcc
Confidence 8888899999999999988888889989999999985 10012234311 1 1233
Q ss_pred HHHHHHHHHHHcCCcEEEEecc--cccccCCCccHHHHHHHHhccCC
Q 025344 186 LLIRRAERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVIGRLGL 230 (254)
Q Consensus 186 ~~i~~~~~dLeAGA~~ViiEar--gi~d~~g~~r~d~i~~ii~~l~~ 230 (254)
.-+..+...++|||+. |++- |+=...||...+.+-..+...|.
T Consensus 207 ~avAn~laA~~aGa~~--vd~tv~GlG~~aGN~~le~lv~~L~~~g~ 251 (345)
T 1nvm_A 207 LGVANSIVAVEEGCDR--VDASLAGMGAGAGNAPLEVFIAVAERLGW 251 (345)
T ss_dssp CHHHHHHHHHHTTCCE--EEEBGGGCSSTTCBCBHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCE--EEecchhccCCccCcCHHHHHHHHHhcCC
Confidence 3488888999999986 5775 77778999998888777765553
No 42
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=93.26 E-value=0.35 Score=42.67 Aligned_cols=87 Identities=10% Similarity=0.098 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCC------cccC-----ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG------SLEI-----PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAY 170 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG------ti~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~ 170 (254)
.+++.++.++++||++||+... ...+ +.++..++-+.+++.|+++.+ ++...+.... +
T Consensus 37 ~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~-~~~~~~~~~~----~------ 105 (305)
T 3obe_A 37 DMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISS-SHLTPSLREY----T------ 105 (305)
T ss_dssp THHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEE-EBCCCSCCCC----C------
T ss_pred CHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEE-eecccccccc----c------
Confidence 6999999999999999999853 1222 233677888889999998754 2221111111 0
Q ss_pred cccCCCccccccCHHHHHHHHHHHHHcCCcEEEEe
Q 025344 171 VARAPRSTEYVEDVDLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 171 ~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiE 205 (254)
+..+ ....+.+-+.++.+-+.||..|++-
T Consensus 106 --~~~~----~~~~~~~~~~i~~A~~lG~~~v~~~ 134 (305)
T 3obe_A 106 --KENM----PKFDEFWKKATDIHAELGVSCMVQP 134 (305)
T ss_dssp --GGGH----HHHHHHHHHHHHHHHHHTCSEEEEC
T ss_pred --hhhH----HHHHHHHHHHHHHHHHcCCCEEEeC
Confidence 0000 1124455555666667799999984
No 43
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=93.26 E-value=0.34 Score=42.13 Aligned_cols=85 Identities=12% Similarity=0.130 Sum_probs=60.9
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHH
Q 025344 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~ 186 (254)
++++.+.|.|.|-+... .-.+++...++++.+++.|+.+..++.-
T Consensus 94 i~~~~~~Gad~V~l~~~-~~~~p~~l~~~i~~~~~~g~~v~~~v~t---------------------------------- 138 (232)
T 3igs_A 94 VDALAQAGAAIIAVDGT-ARQRPVAVEALLARIHHHHLLTMADCSS---------------------------------- 138 (232)
T ss_dssp HHHHHHHTCSEEEEECC-SSCCSSCHHHHHHHHHHTTCEEEEECCS----------------------------------
T ss_pred HHHHHHcCCCEEEECcc-ccCCHHHHHHHHHHHHHCCCEEEEeCCC----------------------------------
Confidence 56789999999977544 3344467779999999988877654321
Q ss_pred HHHHHHHHHHcCCcEEEEeccccccc--CCCccHHHHHHHHhc
Q 025344 187 LIRRAERCLEAGADMIMIDSDDVCKH--ADSLRADIIAKVIGR 227 (254)
Q Consensus 187 ~i~~~~~dLeAGA~~ViiEargi~d~--~g~~r~d~i~~ii~~ 227 (254)
.+.+++..++||++|.+-.+|.... ......+++.++.+.
T Consensus 139 -~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~ 180 (232)
T 3igs_A 139 -VDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA 180 (232)
T ss_dssp -HHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT
T ss_pred -HHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc
Confidence 5667788999999998877765432 234466788888764
No 44
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=93.25 E-value=0.32 Score=43.97 Aligned_cols=132 Identities=16% Similarity=0.249 Sum_probs=79.3
Q ss_pred HHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhC-CceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 025344 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (254)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~-gV~v~~G-tl~E~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (254)
.+...+..+|- ++++=.+ .++.+.+++.++.+++. +.++ | .++ +... .++++++.|.+.|++.|+
T Consensus 27 ~la~av~~aG~-lG~i~~~-----~~~~~~~~~~i~~i~~~~~~p~--gvnl~---~~~~--~~~~~~~~a~~~g~d~V~ 93 (332)
T 2z6i_A 27 DLAGAVSKAGG-LGIIGGG-----NAPKEVVKANIDKIKSLTDKPF--GVNIM---LLSP--FVEDIVDLVIEEGVKVVT 93 (332)
T ss_dssp HHHHHHHHHTS-BEEEECT-----TCCHHHHHHHHHHHHHHCCSCE--EEEEC---TTST--THHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhCCC-cEEeCCC-----CCCHHHHHHHHHHHHHhcCCCE--EEEec---CCCC--CHHHHHHHHHHCCCCEEE
Confidence 44555666664 6666222 23555677777777753 1111 2 111 0122 588999999999999999
Q ss_pred ecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCC
Q 025344 120 LNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGA 199 (254)
Q Consensus 120 ISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA 199 (254)
++.|. | .++++.+++.|+++..-+ . + ++.++...++||
T Consensus 94 ~~~g~---p----~~~i~~l~~~g~~v~~~v---------~----------------------~----~~~a~~~~~~Ga 131 (332)
T 2z6i_A 94 TGAGN---P----SKYMERFHEAGIIVIPVV---------P----------------------S----VALAKRMEKIGA 131 (332)
T ss_dssp ECSSC---G----GGTHHHHHHTTCEEEEEE---------S----------------------S----HHHHHHHHHTTC
T ss_pred ECCCC---h----HHHHHHHHHcCCeEEEEe---------C----------------------C----HHHHHHHHHcCC
Confidence 99883 3 246677777777665321 0 1 445667788999
Q ss_pred cEEEEecc--cccccCCCccHHHHHHHHhccC
Q 025344 200 DMIMIDSD--DVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 200 ~~ViiEar--gi~d~~g~~r~d~i~~ii~~l~ 229 (254)
|.|++++. |-... .....+++.++.+.++
T Consensus 132 D~i~v~g~~~GG~~g-~~~~~~ll~~i~~~~~ 162 (332)
T 2z6i_A 132 DAVIAEGMEAGGHIG-KLTTMTLVRQVATAIS 162 (332)
T ss_dssp SCEEEECTTSSEECC-SSCHHHHHHHHHHHCS
T ss_pred CEEEEECCCCCCCCC-CccHHHHHHHHHHhcC
Confidence 99999875 22111 1233466666665543
No 45
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=93.19 E-value=1.4 Score=40.87 Aligned_cols=77 Identities=19% Similarity=0.229 Sum_probs=52.4
Q ss_pred HHHHHHH---hhcccccEEeecCccc------ccCChhHHHHHHHHHHh--------CCce----ecCC-cHHHHHHHhC
Q 025344 42 VLEDIFE---SMGQFVDGLKFSGGSH------SLMPKPFIEEVVKRAHQ--------HDVY----VSTG-DWAEHLIRNG 99 (254)
Q Consensus 42 ~~~DlLe---~ag~yID~lKfg~GT~------~l~~~~~l~eKi~l~~~--------~gV~----v~~G-tl~E~a~~qg 99 (254)
..+|+.+ ..++|.|++=+=.||- .+..++.+.+.++..++ .+++ +.|+ +.
T Consensus 162 ~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~-------- 233 (367)
T 3zwt_A 162 AAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTS-------- 233 (367)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCH--------
T ss_pred CHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCH--------
Confidence 4555554 5567788877766542 45566778888777654 3443 4444 22
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccC
Q 025344 100 PSAFKEYVEDCKQVGFDTIELNVGSLEI 127 (254)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i 127 (254)
+.+.++.+.|.+.|.|.|-+++.+...
T Consensus 234 -~~~~~ia~~~~~aGadgi~v~ntt~~r 260 (367)
T 3zwt_A 234 -QDKEDIASVVKELGIDGLIVTNTTVSR 260 (367)
T ss_dssp -HHHHHHHHHHHHHTCCEEEECCCBSCC
T ss_pred -HHHHHHHHHHHHcCCCEEEEeCCCccc
Confidence 157788899999999999999998654
No 46
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=93.07 E-value=2.7 Score=38.49 Aligned_cols=185 Identities=16% Similarity=0.138 Sum_probs=108.9
Q ss_pred hhHHHHHHHhhcccc--cEEeecCcccccCChhHHHHHHHHHHhCCceecC----CcHHHHHHHhCCchHHHHHHHHHHc
Q 025344 40 HNVLEDIFESMGQFV--DGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQV 113 (254)
Q Consensus 40 ~~~~~DlLe~ag~yI--D~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~----Gtl~E~a~~qg~~~~~~yl~~~k~l 113 (254)
+..++.+++.|-+.= =+|-++-|+...++.+.+...+..+.+++|+|+. |..+ +.+..|-+.
T Consensus 27 ~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~~~VPValHlDHg~~~------------e~~~~ai~~ 94 (305)
T 1rvg_A 27 MEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSY------------ESVLRALRA 94 (305)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEECSH------------HHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHhCCCcEEEECCCCCCH------------HHHHHHHHc
Confidence 344555555443211 1344444444333434444554444447776664 3344 344566789
Q ss_pred CCCEEEecCCcccCChhHH----HHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHH
Q 025344 114 GFDTIELNVGSLEIPEETL----LRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (254)
Q Consensus 114 GF~~IEISdGti~i~~~~r----~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~ 189 (254)
||+.|=|.-... |.++= .++++.+...|.-|--|+|.=-+. +-+.. ...-...+| ||++..+
T Consensus 95 GFtSVMiDgS~~--p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~-Ed~~~-~~~~~~~yT----------~Peea~~ 160 (305)
T 1rvg_A 95 GFTSVMIDKSHE--DFETNVRETRRVVEAAHAVGVTVEAELGRLAGI-EEHVA-VDEKDALLT----------NPEEARI 160 (305)
T ss_dssp TCSEEEECCTTS--CHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCS-CC-------CCTTCC----------CHHHHHH
T ss_pred CCCeeeeCCCCC--CHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCc-cCCcc-ccccccccC----------CHHHHHH
Confidence 999998866544 44432 367888999999999999984221 10000 000011133 6777766
Q ss_pred HHHHHHHcCCcEEEEec---ccccc--cCCCccHHHHHHHHhccCCCceEEecC-CchhHHHHHHHhCCC
Q 025344 190 RAERCLEAGADMIMIDS---DDVCK--HADSLRADIIAKVIGRLGLEKTMFEAT-NPRTSEWFIRRYGPK 253 (254)
Q Consensus 190 ~~~~dLeAGA~~ViiEa---rgi~d--~~g~~r~d~i~~ii~~l~~~klifEAP-~k~qQ~~~I~~~Gp~ 253 (254)
.+++ -|.|.+=+== -|.|. .+-.++.|.+++|-+.++.-=++==+. -|+..+..|+.||-+
T Consensus 161 Fv~~---TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~ 227 (305)
T 1rvg_A 161 FMER---TGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGE 227 (305)
T ss_dssp HHHH---HCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred HHHH---HCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhccc
Confidence 6654 4888665432 28998 566899999999999887443333332 467777888888865
No 47
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=93.00 E-value=0.64 Score=42.37 Aligned_cols=113 Identities=13% Similarity=0.186 Sum_probs=73.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCC--------------cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG--------------SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF 167 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG--------------ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~ 167 (254)
..+.|++.+|+.||..| ++=- -..|..++-.++|+++++.||...+=+
T Consensus 109 ~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v----------------- 170 (286)
T 2p10_A 109 VMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYV----------------- 170 (286)
T ss_dssp CHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEE-----------------
T ss_pred CHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEec-----------------
Confidence 58999999999999999 8776 345778888899999999888744410
Q ss_pred ccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecc----cccccCCCccH----HHHHHHH---hccCCC-ceEE
Q 025344 168 GAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD----DVCKHADSLRA----DIIAKVI---GRLGLE-KTMF 235 (254)
Q Consensus 168 ~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar----gi~d~~g~~r~----d~i~~ii---~~l~~~-klif 235 (254)
. + .++++.-.+||+|.|.+|-- |+....-.+.. +.++++. .++.++ .+|.
T Consensus 171 ---~-----------~----~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc 232 (286)
T 2p10_A 171 ---F-----------S----PEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILS 232 (286)
T ss_dssp ---C-----------S----HHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEE
T ss_pred ---C-----------C----HHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEe
Confidence 0 1 67788889999999999986 55443322222 2444444 445555 4556
Q ss_pred ec-CC-chhHHHHHHHh
Q 025344 236 EA-TN-PRTSEWFIRRY 250 (254)
Q Consensus 236 EA-P~-k~qQ~~~I~~~ 250 (254)
-| |- ..+-+.++.+.
T Consensus 233 ~gGpIstpeDv~~~l~~ 249 (286)
T 2p10_A 233 HGGPIANPEDARFILDS 249 (286)
T ss_dssp ESTTCCSHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHhc
Confidence 66 53 23344444444
No 48
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=92.77 E-value=0.44 Score=40.44 Aligned_cols=133 Identities=13% Similarity=0.139 Sum_probs=75.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------ccCChhHHHHHHHHHHHcCCcccceeeeecCC-CCCCCccccccccccccC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK-SDIPSDRDRAFGAYVARA 174 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~-s~v~~~~d~~~~~~~~~~ 174 (254)
.+++.++.++++||+.||+..+. ..++.++..++.+.++++|+++.+ +..-.+. -.+.+ .|+.
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~h~~~~~~~~~-~~~~-------- 82 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWEN-AFCHSGYLINLAS-PKDD-------- 82 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGG-EEEECCTTCCTTC-SSHH--------
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcce-eEEecccccccCC-CCHH--------
Confidence 57788999999999999997532 145667888899999999999621 2221110 01111 1110
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccH-------HHHHHHHhccCCCceEEecC---------
Q 025344 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRA-------DIIAKVIGRLGLEKTMFEAT--------- 238 (254)
Q Consensus 175 ~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~-------d~i~~ii~~l~~~klifEAP--------- 238 (254)
......+.+.+.++..-+.||..|.+-.-... +.-+. +.+.++++..--=+|.+|.-
T Consensus 83 ----~r~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~---~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~~~~~~~ 155 (287)
T 2x7v_A 83 ----IWQKSVELLKKEVEICRKLGIRYLNIHPGSHL---GTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQKGGNIGY 155 (287)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTCCEEEECCEECT---TSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCCTTEECS
T ss_pred ----HHHHHHHHHHHHHHHHHHcCCCEEEEecCCCC---CCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCCCCccCC
Confidence 00112455666666677789999988542111 11112 23344443311125777763
Q ss_pred CchhHHHHHHHhC
Q 025344 239 NPRTSEWFIRRYG 251 (254)
Q Consensus 239 ~k~qQ~~~I~~~G 251 (254)
+..+-..++++.+
T Consensus 156 ~~~~~~~l~~~~~ 168 (287)
T 2x7v_A 156 KLEQLKKIRDLVD 168 (287)
T ss_dssp SHHHHHHHHHHCS
T ss_pred CHHHHHHHHHhcC
Confidence 2344557777776
No 49
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=92.71 E-value=3 Score=37.59 Aligned_cols=133 Identities=17% Similarity=0.181 Sum_probs=83.1
Q ss_pred hHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCC-ceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHD-VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~g-V~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (254)
..+......+| ++.++= + ..++.+.+++.++.+++.- .++--+.+. .+. .++++++.+.+.|.+.|.
T Consensus 40 ~~la~av~~aG-glG~i~----~-~~~~~~~l~~~i~~i~~~~~~p~gVnl~~----~~~--~~~~~~~~~~~~g~d~V~ 107 (326)
T 3bo9_A 40 PTLAAAVSEAG-GLGIIG----S-GAMKPDDLRKAISELRQKTDKPFGVNIIL----VSP--WADDLVKVCIEEKVPVVT 107 (326)
T ss_dssp HHHHHHHHHTT-SBEEEE----C-TTCCHHHHHHHHHHHHTTCSSCEEEEEET----TST--THHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhCC-CcEEeC----C-CCCCHHHHHHHHHHHHHhcCCCEEEEEec----cCC--CHHHHHHHHHHCCCCEEE
Confidence 34555556666 666662 1 2235667888888888752 222112111 122 689999999999999999
Q ss_pred ecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCC
Q 025344 120 LNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGA 199 (254)
Q Consensus 120 ISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA 199 (254)
++-|. | .++++.+++.|.++...+. + .+.+++..++||
T Consensus 108 l~~g~---p----~~~~~~l~~~g~~v~~~v~-------------------------------s----~~~a~~a~~~Ga 145 (326)
T 3bo9_A 108 FGAGN---P----TKYIRELKENGTKVIPVVA-------------------------------S----DSLARMVERAGA 145 (326)
T ss_dssp EESSC---C----HHHHHHHHHTTCEEEEEES-------------------------------S----HHHHHHHHHTTC
T ss_pred ECCCC---c----HHHHHHHHHcCCcEEEEcC-------------------------------C----HHHHHHHHHcCC
Confidence 98873 4 3567788888777654210 1 455667789999
Q ss_pred cEEEEecc--cccccCCCccHHHHHHHHhcc
Q 025344 200 DMIMIDSD--DVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 200 ~~ViiEar--gi~d~~g~~r~d~i~~ii~~l 228 (254)
|.|++++. |-... .....+++.++.+.+
T Consensus 146 D~i~v~g~~~GG~~G-~~~~~~ll~~i~~~~ 175 (326)
T 3bo9_A 146 DAVIAEGMESGGHIG-EVTTFVLVNKVSRSV 175 (326)
T ss_dssp SCEEEECTTSSEECC-SSCHHHHHHHHHHHC
T ss_pred CEEEEECCCCCccCC-CccHHHHHHHHHHHc
Confidence 99999985 21111 123456677776654
No 50
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=92.70 E-value=0.55 Score=39.91 Aligned_cols=89 Identities=17% Similarity=0.275 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~ 180 (254)
.+++.++.++++||+.||+..... ..+..+..++.+.+++.|+++..-.+.-. ...+.+ .|+. ..
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-~~~l~~-~d~~------------~r 83 (290)
T 2qul_A 18 DFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKS-EYDFAS-PDKS------------VR 83 (290)
T ss_dssp CHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECG-GGCTTC-SCHH------------HH
T ss_pred cHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCC-CCCCCC-CCHH------------HH
Confidence 689999999999999999986542 33446777899999999999877322100 001111 1110 00
Q ss_pred ccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 181 VEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 181 ~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
....+.+.+.++..-+.||..|.+
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~ 107 (290)
T 2qul_A 84 DAGTEYVKRLLDDCHLLGAPVFAG 107 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEe
Confidence 112455666666667789999985
No 51
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=92.45 E-value=0.54 Score=39.91 Aligned_cols=116 Identities=11% Similarity=0.137 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------ccCChhHHHHHHHHHHHcCCcccceeeeecCC-CCCCCccccccccccccC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK-SDIPSDRDRAFGAYVARA 174 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~-s~v~~~~d~~~~~~~~~~ 174 (254)
.+++.++.++++||++|||.... ..++.++..++-+.++++|+..++ .-.+. -.+.+ |+.
T Consensus 15 ~~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~---~h~~~~~~l~s--~~~-------- 81 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAV---IHASYLVNLGA--EGE-------- 81 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEE---EECCTTCCTTC--SST--------
T ss_pred cHHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEE---EecCcccCCCC--CHH--------
Confidence 58888999999999999995532 245577888888999999993322 21110 01111 111
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhc----cCCCceEEecC
Q 025344 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR----LGLEKTMFEAT 238 (254)
Q Consensus 175 ~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~----l~~~klifEAP 238 (254)
....+.+.+.+.++..-+.||..|.+-.-.. .. +.-.+-+.++++. .|+ +|.+|.-
T Consensus 82 ----~r~~~~~~~~~~i~~a~~lGa~~vv~h~g~~-~~--~~~~~~l~~l~~~a~~~~gv-~l~lEn~ 141 (270)
T 3aam_A 82 ----LWEKSVASLADDLEKAALLGVEYVVVHPGSG-RP--ERVKEGALKALRLAGVRSRP-VLLVENT 141 (270)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTCCEEEECCCBS-CH--HHHHHHHHHHHHHHTCCSSS-EEEEECC
T ss_pred ----HHHHHHHHHHHHHHHHHHcCCCEEEECCCCC-CH--HHHHHHHHHHHHhhcccCCC-EEEEecC
Confidence 0122466677777777788999998865322 11 1112233444432 333 6788864
No 52
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=92.44 E-value=0.31 Score=44.58 Aligned_cols=125 Identities=14% Similarity=0.114 Sum_probs=90.6
Q ss_pred HHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc--cc
Q 025344 71 FIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA--KP 148 (254)
Q Consensus 71 ~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v--~~ 148 (254)
.+++-++.++++|..|..|- |.+-.-.++.+-+..+.+.++|.+.|-|.|-.--+.+.+-.++|+.+++. +.- ..
T Consensus 123 ~~~~~v~~a~~~g~~v~f~~--~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~-~~~~~~~ 199 (325)
T 3eeg_A 123 MAVAAVKQAKKVVHEVEFFC--EDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDN-VSNIDKA 199 (325)
T ss_dssp TTHHHHHHHHTTSSEEEEEE--ETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHH-CSCGGGS
T ss_pred HHHHHHHHHHHCCCEEEEEc--cccccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHh-CCCCCce
Confidence 36688999999999887652 22223444567777888889999999999999899999999999999884 110 01
Q ss_pred eeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecc--cccccCCCccHHHHHHHHh
Q 025344 149 KFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVIG 226 (254)
Q Consensus 149 E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar--gi~d~~g~~r~d~i~~ii~ 226 (254)
.++.- +-.|...-+..+...++|||+. |++- |+=...||...+.+-..+.
T Consensus 200 ~i~~H--------------------------~Hnd~GlA~AN~laA~~aGa~~--vd~tv~GlGer~GN~~lE~vv~~L~ 251 (325)
T 3eeg_A 200 ILSAH--------------------------CHNDLGLATANSLAALQNGARQ--VECTINGIGERAGNTALEEVVMAME 251 (325)
T ss_dssp EEEEC--------------------------BCCTTSCHHHHHHHHHHHTCCE--EEEBGGGCCSTTCCCBHHHHHHHHH
T ss_pred EEEEE--------------------------eCCCCCHHHHHHHHHHHhCCCE--EEEecccccccccchhHHHHHHHHH
Confidence 23331 1112334478888899999996 4664 8888999999887766664
No 53
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=92.42 E-value=0.55 Score=41.94 Aligned_cols=144 Identities=9% Similarity=0.078 Sum_probs=88.9
Q ss_pred HHHhhcccccEEeecCccccc-CC--hhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 025344 46 IFESMGQFVDGLKFSGGSHSL-MP--KPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (254)
Q Consensus 46 lLe~ag~yID~lKfg~GT~~l-~~--~~~l~eKi~l~~~~-gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (254)
.|..+| ||.+=+||+.+.- .| .+ ..+.++.+++. |+.+. .|. .+ .+-++.+.+.|.+.|-|+
T Consensus 35 ~L~~~G--v~~IE~g~~~~~~~~p~~~d-~~~~~~~~~~~~~~~~~--~l~-----~~----~~~i~~a~~ag~~~v~i~ 100 (298)
T 2cw6_A 35 MLSEAG--LSVIETTSFVSPKWVPQMGD-HTEVLKGIQKFPGINYP--VLT-----PN----LKGFEAAVAAGAKEVVIF 100 (298)
T ss_dssp HHHHTT--CSEECCEECCCTTTCGGGTT-HHHHHHHSCCCTTCBCC--EEC-----CS----HHHHHHHHHTTCSEEEEE
T ss_pred HHHHcC--cCEEEECCCcCcccccccCC-HHHHHHHHhhCCCCEEE--EEc-----CC----HHhHHHHHHCCCCEEEEE
Confidence 344444 8899999875531 11 12 24444444443 33322 121 23 234778888999999997
Q ss_pred CCcccCC------------hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHH
Q 025344 122 VGSLEIP------------EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (254)
Q Consensus 122 dGti~i~------------~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~ 189 (254)
..+-+.- .+.-.+.|+.+++.|++|-..+..- ++...+ +..+++.+++
T Consensus 101 ~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~-----~~~~~~---------------~~~~~~~~~~ 160 (298)
T 2cw6_A 101 GAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCA-----LGCPYE---------------GKISPAKVAE 160 (298)
T ss_dssp EESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETT-----TCBTTT---------------BSCCHHHHHH
T ss_pred ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEE-----eeCCcC---------------CCCCHHHHHH
Confidence 7554331 1244577999999999874333221 111111 1126899999
Q ss_pred HHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 190 RAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 190 ~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
.++...++||+.|- ++|..|-..+..+.++++.+
T Consensus 161 ~~~~~~~~Ga~~i~-----l~DT~G~~~P~~~~~lv~~l 194 (298)
T 2cw6_A 161 VTKKFYSMGCYEIS-----LGDTIGVGTPGIMKDMLSAV 194 (298)
T ss_dssp HHHHHHHTTCSEEE-----EEETTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEE-----ecCCCCCcCHHHHHHHHHHH
Confidence 99999999999774 56888888888887777544
No 54
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=92.40 E-value=0.21 Score=45.82 Aligned_cols=122 Identities=16% Similarity=0.313 Sum_probs=74.4
Q ss_pred hHHHHHHHHHHhC-----CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----CChhHHHHHHHHH
Q 025344 70 PFIEEVVKRAHQH-----DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-----IPEETLLRYVRLV 139 (254)
Q Consensus 70 ~~l~eKi~l~~~~-----gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~-----i~~~~r~~lI~~~ 139 (254)
..+.|.|+-.++. +|++++..|.+--+. .+..-++.+.+.+.|.++|+||+|... .++.-..++++.+
T Consensus 195 r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~--~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~i 272 (340)
T 3gr7_A 195 RFLGEVIDAVREVWDGPLFVRISASDYHPDGLT--AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELI 272 (340)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCC--GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEeccccccCCCCC--HHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHH
Confidence 3456666666653 446677544432111 125667788888899999999988642 1233345677777
Q ss_pred HHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcC-CcEEEEecccccccCCCccH
Q 025344 140 KSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRA 218 (254)
Q Consensus 140 ~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAG-A~~ViiEargi~d~~g~~r~ 218 (254)
++. +++. .--.| .+. | .+.+++.|++| ||.|++ +|.+.. ++
T Consensus 273 k~~-------~~iP--Vi~~G--------gI~-----------s----~e~a~~~L~~G~aD~V~i-GR~~la-----nP 314 (340)
T 3gr7_A 273 RRE-------ADIP--TGAVG--------LIT-----------S----GWQAEEILQNGRADLVFL-GRELLR-----NP 314 (340)
T ss_dssp HHH-------TTCC--EEEES--------SCC-----------C----HHHHHHHHHTTSCSEEEE-CHHHHH-----CT
T ss_pred HHH-------cCCc--EEeeC--------CCC-----------C----HHHHHHHHHCCCeeEEEe-cHHHHh-----Cc
Confidence 763 2210 00000 111 2 56778889999 999998 465442 26
Q ss_pred HHHHHHHhccCCC
Q 025344 219 DIIAKVIGRLGLE 231 (254)
Q Consensus 219 d~i~~ii~~l~~~ 231 (254)
+++.++.+.++.+
T Consensus 315 dl~~ki~~~l~~~ 327 (340)
T 3gr7_A 315 YWPYAAARELGAK 327 (340)
T ss_dssp THHHHHHHHTTCC
T ss_pred hHHHHHHHHCCCC
Confidence 7889999888854
No 55
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=92.32 E-value=0.27 Score=41.46 Aligned_cols=87 Identities=18% Similarity=0.303 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHcCCCEEEec-CCccc--CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 102 AFKEYVEDCKQVGFDTIELN-VGSLE--IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEIS-dGti~--i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
.+++.++.++++||+.||+. ..... ++.....++.+.+++.|+++.+ ++.-.+ +.+ .|+.
T Consensus 15 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~---~~~-~~~~------------ 77 (278)
T 1i60_A 15 NLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLA-LNALVF---FNN-RDEK------------ 77 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEE-EEEEEC---CSS-CCHH------------
T ss_pred CHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeee-eccccc---ccc-CCHH------------
Confidence 68888999999999999998 54321 2335566778888888988764 433211 111 1110
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEe
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiE 205 (254)
......+.+.+.++..-+.||..|++=
T Consensus 78 ~~~~~~~~~~~~i~~a~~lG~~~v~~~ 104 (278)
T 1i60_A 78 GHNEIITEFKGMMETCKTLGVKYVVAV 104 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 001124555666666667899988883
No 56
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=92.26 E-value=1 Score=38.31 Aligned_cols=133 Identities=14% Similarity=0.092 Sum_probs=74.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
.+++.++.++++||+.||+..-. ..+..++-+.+++.|+++.+ ++.- ...... .+.- ....|.. ..
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~l~~~gl~~~~-~~~~--~~~~~~-~~~~--~~~~~~~----r~ 89 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFPY----DFDADVIARELKQHNLTQVL-FNMP--PGDWAA-GERG--MAAISGR----EQ 89 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCCT----TSCHHHHHHHHHHTTCEEEE-EECC--CSCTTT-TCCB--CTTCTTC----HH
T ss_pred CHHHHHHHHHHcCCCEEEecCCc----cCCHHHHHHHHHHcCCcEEE-EecC--CCcccc-CCCC--cCCCccH----HH
Confidence 79999999999999999998521 23456788889999999764 2211 101100 0000 0000100 01
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccH-------HHHHH---HHhccCCCceEEec------C-----Cc
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRA-------DIIAK---VIGRLGLEKTMFEA------T-----NP 240 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~-------d~i~~---ii~~l~~~klifEA------P-----~k 240 (254)
...+.+.+.++..-+.||..|.+-+ | . ..+.-+. +.+.+ +++..|+ +|.+|. | ..
T Consensus 90 ~~~~~~~~~i~~A~~lGa~~v~~~~-g-~-~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~n~~~~~~~~~~~~ 165 (269)
T 3ngf_A 90 EFRDNVDIALHYALALDCRTLHAMS-G-I-TEGLDRKACEETFIENFRYAADKLAPHGI-TVLVEPLNTRNMPGYFIVHQ 165 (269)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEECCB-C-B-CTTSCHHHHHHHHHHHHHHHHHHHGGGTC-EEEECCCCTTTSTTBSCCCH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcc-C-C-CCCCCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEeeCCcccCccchhcCH
Confidence 1244555666666678999998854 3 2 2222111 22222 3344454 588894 2 34
Q ss_pred hhHHHHHHHhCC
Q 025344 241 RTSEWFIRRYGP 252 (254)
Q Consensus 241 ~qQ~~~I~~~Gp 252 (254)
.+-..++++.|+
T Consensus 166 ~~~~~l~~~v~~ 177 (269)
T 3ngf_A 166 LEAVGLVKRVNR 177 (269)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHhCC
Confidence 566778888873
No 57
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=92.25 E-value=0.23 Score=42.56 Aligned_cols=134 Identities=10% Similarity=0.078 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc-ccCChhHHHHHHHHHHHcCCcccceeeeecCCC---C-------CCCccccccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS-LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKS---D-------IPSDRDRAFGAY 170 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt-i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s---~-------v~~~~d~~~~~~ 170 (254)
.+++.++.++++||+.||+.... ..++.++..++.+.+++.|+++.+= +.-.... + +++ .|+
T Consensus 22 ~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~~~g~~~~~~~~~~~~~~~-~~~----- 94 (290)
T 3tva_A 22 GLGVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVI-FGGFDGESYADIPTTARTVGL-VPL----- 94 (290)
T ss_dssp SSSBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEE-ECCCTTCCCSSHHHHHHHSSS-CST-----
T ss_pred CHHHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEE-eeccCCcccccccccccccCC-CCH-----
Confidence 68889999999999999999743 3577888889999999999997652 2100000 0 010 011
Q ss_pred cccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccC--CCcc--HHHHHHH---HhccCCCceEEecC--Cch
Q 025344 171 VARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHA--DSLR--ADIIAKV---IGRLGLEKTMFEAT--NPR 241 (254)
Q Consensus 171 ~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~--g~~r--~d~i~~i---i~~l~~~klifEAP--~k~ 241 (254)
.. .....+.+.+.++..-+.||..|++-+- ..... ..++ .+.+.++ ++..|+ +|.+|.- .+.
T Consensus 95 ---~~----r~~~~~~~~~~i~~a~~lG~~~v~~~~G-~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~~~~~~ 165 (290)
T 3tva_A 95 ---ET----RASRVAEMKEISDFASWVGCPAIGLHIG-FVPESSSPDYSELVRVTQDLLTHAANHGQ-AVHLETGQESAD 165 (290)
T ss_dssp ---TT----HHHHHHHHHHHHHHHHHHTCSEEEECCC-CCCCTTSHHHHHHHHHHHHHHHHHHTTTC-EEEEECCSSCHH
T ss_pred ---HH----HHHHHHHHHHHHHHHHHcCCCEEEEcCC-CCcccchHHHHHHHHHHHHHHHHHHHcCC-EEEEecCCCCHH
Confidence 00 1123455666666666789999998642 11111 0000 1112222 333443 4666753 455
Q ss_pred hHHHHHHHhC
Q 025344 242 TSEWFIRRYG 251 (254)
Q Consensus 242 qQ~~~I~~~G 251 (254)
+-..++++.|
T Consensus 166 ~~~~l~~~~~ 175 (290)
T 3tva_A 166 HLLEFIEDVN 175 (290)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 6667888887
No 58
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=92.11 E-value=1.1 Score=40.12 Aligned_cols=104 Identities=14% Similarity=0.277 Sum_probs=69.0
Q ss_pred hhHHHHHHHhhc-ccccEEeecCccc-ccCChhHHH-----------------HHHHHHHhC--CceecCCcHHHHHHHh
Q 025344 40 HNVLEDIFESMG-QFVDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH--DVYVSTGDWAEHLIRN 98 (254)
Q Consensus 40 ~~~~~DlLe~ag-~yID~lKfg~GT~-~l~~~~~l~-----------------eKi~l~~~~--gV~v~~Gtl~E~a~~q 98 (254)
+..+.+++...- .-+|++=+|.=-| .+.+-..++ +.++-.|+. ++++..=|++...+..
T Consensus 33 ~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~ 112 (271)
T 3nav_A 33 PEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYAR 112 (271)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHH
Confidence 355555555442 2499999995321 223333343 344445544 3333322677777777
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccccee
Q 025344 99 GPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (254)
Q Consensus 99 g~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~ 150 (254)
| +++|++.|++.|++.+=|. ++|.++..++++.++++|+.+++=+
T Consensus 113 g---~~~f~~~~~~aGvdGvIip----Dlp~ee~~~~~~~~~~~gl~~I~lv 157 (271)
T 3nav_A 113 G---IDDFYQRCQKAGVDSVLIA----DVPTNESQPFVAAAEKFGIQPIFIA 157 (271)
T ss_dssp C---HHHHHHHHHHHTCCEEEET----TSCGGGCHHHHHHHHHTTCEEEEEE
T ss_pred h---HHHHHHHHHHCCCCEEEEC----CCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 5 8999999999999999886 5777888899999999998865533
No 59
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=92.01 E-value=1.7 Score=38.11 Aligned_cols=112 Identities=15% Similarity=0.194 Sum_probs=72.2
Q ss_pred ceeEecCCCCCCcchhHHHHHHHhhccc-ccEEeecCccc-ccCChhHHH-----------------HHHHHHHhC--Cc
Q 025344 26 VTEMRSPHYTLSSSHNVLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH--DV 84 (254)
Q Consensus 26 lT~V~DkG~~~~~g~~~~~DlLe~ag~y-ID~lKfg~GT~-~l~~~~~l~-----------------eKi~l~~~~--gV 84 (254)
+++|. +|++ .+....++++..-+. +|.+.+|.=-+ .+++-..+. +-++..+++ ++
T Consensus 20 i~~i~-~g~p---~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~ 95 (262)
T 2ekc_A 20 VSYLM-VGYP---DYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDI 95 (262)
T ss_dssp EEEEE-TTSS---CHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS
T ss_pred EEEec-CCCC---ChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC
Confidence 44443 6763 335566666655555 99999986322 122223343 334444444 44
Q ss_pred eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 025344 85 YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 85 ~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (254)
++..=|..-.++.. .+++|++.|++.|++.+=+. ++|.++-.++++.++++|+.+.+
T Consensus 96 Pi~~m~y~n~v~~~---g~~~f~~~~~~aG~dgvii~----dl~~ee~~~~~~~~~~~gl~~i~ 152 (262)
T 2ekc_A 96 PFLLMTYYNPIFRI---GLEKFCRLSREKGIDGFIVP----DLPPEEAEELKAVMKKYVLSFVP 152 (262)
T ss_dssp CEEEECCHHHHHHH---CHHHHHHHHHHTTCCEEECT----TCCHHHHHHHHHHHHHTTCEECC
T ss_pred CEEEEecCcHHHHh---hHHHHHHHHHHcCCCEEEEC----CCCHHHHHHHHHHHHHcCCcEEE
Confidence 43321344555555 47999999999999988886 56778889999999999988654
No 60
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=91.94 E-value=1.1 Score=38.92 Aligned_cols=120 Identities=15% Similarity=0.205 Sum_probs=75.1
Q ss_pred hHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (254)
...+.+++.- +|++=+ +++.+.+++.+++-++.+|++|+.+...- ... +..+.+.++|+++|=+
T Consensus 92 ~~i~~~~~~G---ad~V~l--~~~~~~~p~~l~~~i~~~~~~g~~v~~~v----------~t~-eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 92 DDVDALAQAG---AAIIAV--DGTARQRPVAVEALLARIHHHHLLTMADC----------SSV-DDGLACQRLGADIIGT 155 (232)
T ss_dssp HHHHHHHHHT---CSEEEE--ECCSSCCSSCHHHHHHHHHHTTCEEEEEC----------CSH-HHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHcC---CCEEEE--CccccCCHHHHHHHHHHHHHCCCEEEEeC----------CCH-HHHHHHHhCCCCEEEE
Confidence 3455555544 455533 34444444679999999999999877641 011 2345567899999954
Q ss_pred cC-Cccc---CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHH
Q 025344 121 NV-GSLE---IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLE 196 (254)
Q Consensus 121 Sd-Gti~---i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLe 196 (254)
+. |... ....+ .++++++++.+..|+.+-|+. + .+.+++.++
T Consensus 156 ~~~g~t~~~~~~~~~-~~~i~~l~~~~ipvIA~GGI~-----------------------------t----~~d~~~~~~ 201 (232)
T 3igs_A 156 TMSGYTTPDTPEEPD-LPLVKALHDAGCRVIAEGRYN-----------------------------S----PALAAEAIR 201 (232)
T ss_dssp TTTTSSSSSCCSSCC-HHHHHHHHHTTCCEEEESCCC-----------------------------S----HHHHHHHHH
T ss_pred cCccCCCCCCCCCCC-HHHHHHHHhcCCcEEEECCCC-----------------------------C----HHHHHHHHH
Confidence 32 2211 11112 366777776677777777772 1 455667789
Q ss_pred cCCcEEEEecccccc
Q 025344 197 AGADMIMIDSDDVCK 211 (254)
Q Consensus 197 AGA~~ViiEargi~d 211 (254)
+||+-|+| +..+++
T Consensus 202 ~GadgV~V-Gsal~~ 215 (232)
T 3igs_A 202 YGAWAVTV-GSAITR 215 (232)
T ss_dssp TTCSEEEE-CHHHHC
T ss_pred cCCCEEEE-ehHhcC
Confidence 99999999 565664
No 61
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.93 E-value=1.9 Score=38.42 Aligned_cols=103 Identities=17% Similarity=0.325 Sum_probs=66.9
Q ss_pred hHHHHHHHhhc-ccccEEeecCc-ccccCChhHHH-----------------HHHHHHHhC--CceecCCcHHHHHHHhC
Q 025344 41 NVLEDIFESMG-QFVDGLKFSGG-SHSLMPKPFIE-----------------EVVKRAHQH--DVYVSTGDWAEHLIRNG 99 (254)
Q Consensus 41 ~~~~DlLe~ag-~yID~lKfg~G-T~~l~~~~~l~-----------------eKi~l~~~~--gV~v~~Gtl~E~a~~qg 99 (254)
..+.+++...- .=+|++=+|.= |-.+++-..++ +.++-.|+. ++++..=|.+.-.+..|
T Consensus 32 ~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g 111 (267)
T 3vnd_A 32 ELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANG 111 (267)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhh
Confidence 45555544433 34799999821 11223323333 334444443 33332226777777775
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccccee
Q 025344 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (254)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~ 150 (254)
+++|++.|++.|++.|=|. ++|.++..++++.++++|+.+++=+
T Consensus 112 ---~e~f~~~~~~aGvdgvii~----Dlp~ee~~~~~~~~~~~gl~~i~li 155 (267)
T 3vnd_A 112 ---IDEFYTKAQAAGVDSVLIA----DVPVEESAPFSKAAKAHGIAPIFIA 155 (267)
T ss_dssp ---HHHHHHHHHHHTCCEEEET----TSCGGGCHHHHHHHHHTTCEEECEE
T ss_pred ---HHHHHHHHHHcCCCEEEeC----CCCHhhHHHHHHHHHHcCCeEEEEE
Confidence 8999999999999999996 5677888899999999998866533
No 62
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=91.90 E-value=1 Score=42.95 Aligned_cols=146 Identities=16% Similarity=0.218 Sum_probs=97.1
Q ss_pred hHHHHHHHhhcccccEEeecCcccccCCh-----------hHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHH
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVED 109 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~~l~~~-----------~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~ 109 (254)
..++..+++- +|.+-+-..||-.+.+ +.+.+-++.++++|+.|..+ +|.++..+++.+-+.++.
T Consensus 114 ~di~~A~~aG---~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~--~eda~r~d~~~~~~v~~~ 188 (423)
T 3ivs_A 114 DDARVAVETG---VDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFS--SEDSFRSDLVDLLSLYKA 188 (423)
T ss_dssp HHHHHHHHTT---CSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEE--EESGGGSCHHHHHHHHHH
T ss_pred hhHHHHHHcC---CCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEE--EccCcCCCHHHHHHHHHH
Confidence 3455555543 5566666666544321 34556789999999987754 233334444456677788
Q ss_pred HHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHH
Q 025344 110 CKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (254)
Q Consensus 110 ~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~ 189 (254)
+.+.|.+.|-|.|-.--+.+.+-.++|+.+++. +. ..+++-+ +. |...-+.
T Consensus 189 ~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~-~~--~~i~~H~-Hn-------------------------d~GlAvA 239 (423)
T 3ivs_A 189 VDKIGVNRVGIADTVGCATPRQVYDLIRTLRGV-VS--CDIECHF-HN-------------------------DTGMAIA 239 (423)
T ss_dssp HHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHH-CS--SEEEEEE-BC-------------------------TTSCHHH
T ss_pred HHHhCCCccccCCccCcCCHHHHHHHHHHHHhh-cC--CeEEEEE-CC-------------------------CCchHHH
Confidence 889999999999998888888888999998874 22 2344421 21 2333477
Q ss_pred HHHHHHHcCCcEEEEecc--cccccCCCccHHHHH
Q 025344 190 RAERCLEAGADMIMIDSD--DVCKHADSLRADIIA 222 (254)
Q Consensus 190 ~~~~dLeAGA~~ViiEar--gi~d~~g~~r~d~i~ 222 (254)
.+...++|||+ .|++- |+=+..||...+.+-
T Consensus 240 N~laAv~aGa~--~vd~ti~GlGERaGNa~Le~vv 272 (423)
T 3ivs_A 240 NAYCALEAGAT--HIDTSILGIGERNGITPLGALL 272 (423)
T ss_dssp HHHHHHHTTCC--EEEEBGGGCSSTTCBCBHHHHH
T ss_pred HHHHHHHhCCC--EEEEecccccCcccchhHHHHH
Confidence 88889999999 56665 998999998877654
No 63
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=91.79 E-value=0.27 Score=42.02 Aligned_cols=18 Identities=39% Similarity=0.637 Sum_probs=8.9
Q ss_pred HHHHHHHHHHcCCCEEEe
Q 025344 103 FKEYVEDCKQVGFDTIEL 120 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEI 120 (254)
+++.++.++++||++||+
T Consensus 17 ~~~~l~~~~~~G~~~vEl 34 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIEL 34 (286)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCCEEEE
Confidence 444444445555555554
No 64
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=91.76 E-value=1.3 Score=39.68 Aligned_cols=138 Identities=16% Similarity=0.156 Sum_probs=80.4
Q ss_pred HHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 025344 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (254)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~-gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (254)
.+-.....+| ++.++= .++ +.+.+.+++.++.++++ +.++--+.+....+ .+..++++++.+.+.|.+.|.+
T Consensus 30 ~la~av~~aG-glG~i~--~~~--~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~--~~~~~~~~~~~~~~~g~d~V~~ 102 (328)
T 2gjl_A 30 EMAAAVANAG-GLATLS--ALT--QPSPEALAAEIARCRELTDRPFGVNLTLLPTQ--KPVPYAEYRAAIIEAGIRVVET 102 (328)
T ss_dssp HHHHHHHHTT-SBCEEE--TTT--SSSHHHHHHHHHHHHHHCSSCCEEEEEECCCS--SCCCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCC-CeEEeC--CCC--CCCHHHHHHHHHHHHHhcCCCeEEEEeccccc--cCccHHHHHHHHHhcCCCEEEE
Confidence 4445555566 566662 222 33355677777777653 21111111110000 0236899999999999999999
Q ss_pred cCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCc
Q 025344 121 NVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD 200 (254)
Q Consensus 121 SdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~ 200 (254)
+-|. | .++++.+++.|.++..- + . + .+.++...++|||
T Consensus 103 ~~g~---p----~~~~~~l~~~gi~vi~~--v---~--------------------------t----~~~a~~~~~~GaD 140 (328)
T 2gjl_A 103 AGND---P----GEHIAEFRRHGVKVIHK--C---T--------------------------A----VRHALKAERLGVD 140 (328)
T ss_dssp EESC---C----HHHHHHHHHTTCEEEEE--E---S--------------------------S----HHHHHHHHHTTCS
T ss_pred cCCC---c----HHHHHHHHHcCCCEEee--C---C--------------------------C----HHHHHHHHHcCCC
Confidence 8763 3 36778888888776621 1 0 1 3456678899999
Q ss_pred EEEEeccc---ccccCCCccHHHHHHHHhcc
Q 025344 201 MIMIDSDD---VCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 201 ~ViiEarg---i~d~~g~~r~d~i~~ii~~l 228 (254)
.|++++.+ -.........+++.++.+.+
T Consensus 141 ~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~ 171 (328)
T 2gjl_A 141 AVSIDGFECAGHPGEDDIPGLVLLPAAANRL 171 (328)
T ss_dssp EEEEECTTCSBCCCSSCCCHHHHHHHHHTTC
T ss_pred EEEEECCCCCcCCCCccccHHHHHHHHHHhc
Confidence 99998752 11111123456777776554
No 65
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=91.53 E-value=0.93 Score=38.76 Aligned_cols=131 Identities=16% Similarity=0.141 Sum_probs=77.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
.+++.++.++++||+.||+..... .++..++.+.+++.|+++.+ +..-... .+.+ .|+. ...
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~~---~~~~~~~~~~l~~~gl~v~~-~~~~~~~-~l~~-~d~~------------~r~ 100 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGGL---AGRVNEIKQALNGRNIKVSA-ICAGFKG-FILS-TDPA------------IRK 100 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTTC---GGGHHHHHHHHTTSSCEECE-EECCCCS-CTTB-SSHH------------HHH
T ss_pred CHHHHHHHHHHcCCCEEEecCCch---HHHHHHHHHHHHHcCCeEEE-EecCCCC-cCCC-CCHH------------HHH
Confidence 689999999999999999998743 45677888888999999754 2221110 1111 1111 001
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEecc-cccccCCCccH-------HHHHH---HHhccCCCceEEe--cC-------Cch
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDSD-DVCKHADSLRA-------DIIAK---VIGRLGLEKTMFE--AT-------NPR 241 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEar-gi~d~~g~~r~-------d~i~~---ii~~l~~~klifE--AP-------~k~ 241 (254)
...+.+.+.++..-+.||..|++-+- +-++..-..+. +.+.+ +++..|+ +|.+| .+ ...
T Consensus 101 ~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~~~~~~~~~~~~~ 179 (287)
T 3kws_A 101 ECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGT-SVIFEPLNRKECFYLRQVA 179 (287)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTC-CEEECCCCTTTCSSCCCHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEEecCcccCcccCCHH
Confidence 12455566666667789999998542 22221000111 12222 3344455 68888 32 345
Q ss_pred hHHHHHHHhC
Q 025344 242 TSEWFIRRYG 251 (254)
Q Consensus 242 qQ~~~I~~~G 251 (254)
+-..++++.|
T Consensus 180 ~~~~ll~~v~ 189 (287)
T 3kws_A 180 DAASLCRDIN 189 (287)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHcC
Confidence 6678888887
No 66
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=91.37 E-value=0.16 Score=46.29 Aligned_cols=120 Identities=19% Similarity=0.292 Sum_probs=70.2
Q ss_pred hHHHHHHHHHHhC-----CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----CChhHHHHHHHHH
Q 025344 70 PFIEEVVKRAHQH-----DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-----IPEETLLRYVRLV 139 (254)
Q Consensus 70 ~~l~eKi~l~~~~-----gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~-----i~~~~r~~lI~~~ 139 (254)
..+.|.++-.++. +|++++..|++--+. .+...++.+.+.+.|.++|+||+|+.. .+.....++++.+
T Consensus 195 r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~--~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~i 272 (338)
T 1z41_A 195 RFLREIIDEVKQVWDGPLFVRVSASDYTDKGLD--IADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKI 272 (338)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCC--HHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEecCcccCCCCCC--HHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHH
Confidence 3456666666553 335556444331000 113456777888899999999999753 2222335667777
Q ss_pred HHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcC-CcEEEEecccccccCCCccH
Q 025344 140 KSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRA 218 (254)
Q Consensus 140 ~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAG-A~~ViiEargi~d~~g~~r~ 218 (254)
++. +++. .--.| .+. | .+.+++.|++| ||.|++ +|.+..+ +
T Consensus 273 r~~-------~~iP--Vi~~G--------gi~-----------s----~~~a~~~l~~G~aD~V~i-GR~~i~n-----P 314 (338)
T 1z41_A 273 REQ-------ADMA--TGAVG--------MIT-----------D----GSMAEEILQNGRADLIFI-GRELLRD-----P 314 (338)
T ss_dssp HHH-------HCCE--EEECS--------SCC-----------S----HHHHHHHHHTTSCSEEEE-CHHHHHC-----T
T ss_pred HHH-------CCCC--EEEEC--------CCC-----------C----HHHHHHHHHcCCceEEee-cHHHHhC-----c
Confidence 662 2221 10011 111 2 56777889999 999988 5655432 5
Q ss_pred HHHHHHHhccC
Q 025344 219 DIIAKVIGRLG 229 (254)
Q Consensus 219 d~i~~ii~~l~ 229 (254)
+++.++.+.++
T Consensus 315 dl~~ki~~~~~ 325 (338)
T 1z41_A 315 FFARTAAKQLN 325 (338)
T ss_dssp THHHHHHHHTT
T ss_pred hHHHHHHcCCC
Confidence 67888887776
No 67
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=91.29 E-value=2 Score=38.87 Aligned_cols=102 Identities=20% Similarity=0.213 Sum_probs=72.0
Q ss_pred HHHHHHHHcCCCEEEecCCcc----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccC
Q 025344 105 EYVEDCKQVGFDTIELNVGSL----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~ 174 (254)
+-.+.+-+.|..+|-|=|+.. -+|.++.++-|+.+++.+- -+.|-++- ..|.
T Consensus 101 ~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~--~~~~~i~a-------Rtda--------- 162 (287)
T 3b8i_A 101 RTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARV--DPALTIIA-------RTNA--------- 162 (287)
T ss_dssp HHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCC--STTSEEEE-------EEET---------
T ss_pred HHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCC--CCCcEEEE-------echh---------
Confidence 334444458999999999874 3788889999999999864 23333320 0111
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceEEec
Q 025344 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEA 237 (254)
Q Consensus 175 ~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~klifEA 237 (254)
.....++.|++++...+||||.|.+|+- ...+++.+|.+.++.--+|.|-
T Consensus 163 -----a~~gl~~ai~Ra~ay~eAGAd~i~~e~~--------~~~~~~~~i~~~~~~P~ii~~~ 212 (287)
T 3b8i_A 163 -----ELIDVDAVIQRTLAYQEAGADGICLVGV--------RDFAHLEAIAEHLHIPLMLVTY 212 (287)
T ss_dssp -----TTSCHHHHHHHHHHHHHTTCSEEEEECC--------CSHHHHHHHHTTCCSCEEEECT
T ss_pred -----hhcCHHHHHHHHHHHHHcCCCEEEecCC--------CCHHHHHHHHHhCCCCEEEeCC
Confidence 1124789999999999999999999963 2367889999888744447663
No 68
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=91.26 E-value=0.53 Score=39.06 Aligned_cols=124 Identities=10% Similarity=0.119 Sum_probs=71.3
Q ss_pred hhH-HHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 025344 40 HNV-LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (254)
Q Consensus 40 ~~~-~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~I 118 (254)
.++ ++.+.+.-+ |++=+.. +-..+.+++-++.++++|+.+...- -++....+.++.+.+.|.+.|
T Consensus 66 ~~~~~~~~~~~Ga---d~v~v~~----~~~~~~~~~~~~~~~~~g~~~~v~~-------~~~~t~~~~~~~~~~~g~d~i 131 (211)
T 3f4w_A 66 GHFESQLLFDAGA---DYVTVLG----VTDVLTIQSCIRAAKEAGKQVVVDM-------ICVDDLPARVRLLEEAGADML 131 (211)
T ss_dssp HHHHHHHHHHTTC---SEEEEET----TSCHHHHHHHHHHHHHHTCEEEEEC-------TTCSSHHHHHHHHHHHTCCEE
T ss_pred hHHHHHHHHhcCC---CEEEEeC----CCChhHHHHHHHHHHHcCCeEEEEe-------cCCCCHHHHHHHHHHcCCCEE
Confidence 344 555555444 4444432 2234558888999999998654210 011234456677788899998
Q ss_pred EecCCccc--CChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHH
Q 025344 119 ELNVGSLE--IPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERC 194 (254)
Q Consensus 119 EISdGti~--i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~d 194 (254)
=++.|+-. .+.. -.+.++++++. ...+....|+. .+.++..
T Consensus 132 ~v~~g~~g~~~~~~-~~~~i~~l~~~~~~~~i~~~gGI~----------------------------------~~~~~~~ 176 (211)
T 3f4w_A 132 AVHTGTDQQAAGRK-PIDDLITMLKVRRKARIAVAGGIS----------------------------------SQTVKDY 176 (211)
T ss_dssp EEECCHHHHHTTCC-SHHHHHHHHHHCSSCEEEEESSCC----------------------------------TTTHHHH
T ss_pred EEcCCCcccccCCC-CHHHHHHHHHHcCCCcEEEECCCC----------------------------------HHHHHHH
Confidence 88766421 1111 13455566553 34555555552 1234556
Q ss_pred HHcCCcEEEEecccccccC
Q 025344 195 LEAGADMIMIDSDDVCKHA 213 (254)
Q Consensus 195 LeAGA~~ViiEargi~d~~ 213 (254)
+++||+.|++= +.++++.
T Consensus 177 ~~~Gad~vvvG-sai~~~~ 194 (211)
T 3f4w_A 177 ALLGPDVVIVG-SAITHAA 194 (211)
T ss_dssp HTTCCSEEEEC-HHHHTCS
T ss_pred HHcCCCEEEEC-HHHcCCC
Confidence 88999999884 5677654
No 69
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=91.20 E-value=0.62 Score=40.54 Aligned_cols=135 Identities=16% Similarity=0.121 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc-ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS-LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt-i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~ 180 (254)
.+++ ++.++++||+.||+.... ...+..+..++.+.+++.|+++.+ ..--.....+.+ .|+. ..
T Consensus 38 ~l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~-~~~~~~~~~l~~-~d~~------------~r 102 (309)
T 2hk0_A 38 FGPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTA-GIGPSKTKNLSS-EDAA------------VR 102 (309)
T ss_dssp SHHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEE-ECCCCSSSCSSC-SCHH------------HH
T ss_pred cHHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEE-ecCCCCCCCCCC-CCHH------------HH
Confidence 7889 999999999999998542 233446777889999999999887 321000001111 1110 00
Q ss_pred ccCHHHHHHHHHHHHHcCCcEEEEec---ccccccCCCccHH-------HHH---HHHhccCCCceEEecC---------
Q 025344 181 VEDVDLLIRRAERCLEAGADMIMIDS---DDVCKHADSLRAD-------IIA---KVIGRLGLEKTMFEAT--------- 238 (254)
Q Consensus 181 ~~d~~~~i~~~~~dLeAGA~~ViiEa---rgi~d~~g~~r~d-------~i~---~ii~~l~~~klifEAP--------- 238 (254)
....+.+.+.++..-+.||..|++-. .|.+.....-+.+ .+. ++++..|+ +|.+|.-
T Consensus 103 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lEn~~~~~~~~~~ 181 (309)
T 2hk0_A 103 AAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGI-NLCIEVLNRFENHVLN 181 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTC-EEEEECCCTTTCSSCC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCC-EEEEeecccccccccC
Confidence 11245566666667778999998542 1332111101121 222 22333454 5888864
Q ss_pred CchhHHHHHHHhCC
Q 025344 239 NPRTSEWFIRRYGP 252 (254)
Q Consensus 239 ~k~qQ~~~I~~~Gp 252 (254)
...+-..++++.|+
T Consensus 182 ~~~~~~~l~~~v~~ 195 (309)
T 2hk0_A 182 TAAEGVAFVKDVGK 195 (309)
T ss_dssp SHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHcCC
Confidence 34556678888873
No 70
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=91.19 E-value=0.34 Score=41.50 Aligned_cols=125 Identities=11% Similarity=0.177 Sum_probs=76.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
.+++.++.++++||+.||+. +.. + +..++-+.+++.|+++.+- ..... +.|.. ..
T Consensus 32 ~~~~~l~~~~~~G~~~vEl~-~~~--~--~~~~~~~~l~~~gl~~~~~-~~~~~---------------~~~~~----~~ 86 (301)
T 3cny_A 32 NLQQLLSDIVVAGFQGTEVG-GFF--P--GPEKLNYELKLRNLEIAGQ-WFSSY---------------IIRDG----IE 86 (301)
T ss_dssp CHHHHHHHHHHHTCCEECCC-TTC--C--CHHHHHHHHHHTTCEECEE-EEEEC---------------HHHHH----HH
T ss_pred CHHHHHHHHHHhCCCEEEec-CCC--C--CHHHHHHHHHHCCCeEEEE-eccCC---------------CChhh----HH
Confidence 68999999999999999999 333 3 5667888899999998764 22110 00100 01
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEecc-----ccccc--C--CCc-cHHH----------HHHHHhccCCCceEEecC---
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDSD-----DVCKH--A--DSL-RADI----------IAKVIGRLGLEKTMFEAT--- 238 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEar-----gi~d~--~--g~~-r~d~----------i~~ii~~l~~~klifEAP--- 238 (254)
...+.+.+.++..-+.||..|++=+- |.+.. . ... +.+. +.++++..|+ +|.+|.-
T Consensus 87 ~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lE~~~~~ 165 (301)
T 3cny_A 87 KASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGL-KVAYHHHMGT 165 (301)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTC-EEEEECCTTS
T ss_pred HHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCC-EEEEecCCCc
Confidence 13556667777777899999988642 33211 0 111 2222 2223334454 5888853
Q ss_pred ---CchhHHHHHHHhCC
Q 025344 239 ---NPRTSEWFIRRYGP 252 (254)
Q Consensus 239 ---~k~qQ~~~I~~~Gp 252 (254)
.+.+-..++++.++
T Consensus 166 ~~~~~~~~~~l~~~~~~ 182 (301)
T 3cny_A 166 GIQTKEETDRLMANTDP 182 (301)
T ss_dssp SSCSHHHHHHHHHTSCT
T ss_pred ccCCHHHHHHHHHhCCc
Confidence 45566778888774
No 71
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=91.14 E-value=2.8 Score=37.89 Aligned_cols=105 Identities=21% Similarity=0.223 Sum_probs=59.1
Q ss_pred HHHHHHHHHHcCCCEEEecCCc--c------cC----------ChhHH----HHHHHHHHHcCCcccceeeeecCCCCCC
Q 025344 103 FKEYVEDCKQVGFDTIELNVGS--L------EI----------PEETL----LRYVRLVKSAGLKAKPKFAVMFNKSDIP 160 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGt--i------~i----------~~~~r----~~lI~~~~~~G~~v~~E~g~k~~~s~v~ 160 (254)
+-+-.+.+++.|||.|||.-+. + +. +.+.| +++|+.+++.= -.-+++|...
T Consensus 146 ~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v---~~pv~vris~---- 218 (338)
T 1z41_A 146 FKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW---DGPLFVRVSA---- 218 (338)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC---CSCEEEEEEC----
T ss_pred HHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc---CCcEEEEecC----
Confidence 4444556678999999997653 1 11 12334 45666666641 1236665322
Q ss_pred CccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEeccccccc---CC-CccHHHHHHHHhcc
Q 025344 161 SDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKH---AD-SLRADIIAKVIGRL 228 (254)
Q Consensus 161 ~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~---~g-~~r~d~i~~ii~~l 228 (254)
..|.. +-.+.++.++.++..-++|+++|-+=++..... .+ .+..+.+.+|-+.+
T Consensus 219 -------------~~~~~-~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 276 (338)
T 1z41_A 219 -------------SDYTD-KGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA 276 (338)
T ss_dssp -------------CCCST-TSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH
T ss_pred -------------cccCC-CCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC
Confidence 11111 112577889999999999999999865432211 12 13445566665544
No 72
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=91.14 E-value=1.1 Score=39.49 Aligned_cols=87 Identities=15% Similarity=0.190 Sum_probs=54.1
Q ss_pred HHHHHHHHcCCCEEEecCCccc-CC----hhHHHHHHHHHHHcCCc---ccceeeeecCCCCCCCccccccccccccCCC
Q 025344 105 EYVEDCKQVGFDTIELNVGSLE-IP----EETLLRYVRLVKSAGLK---AKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~-i~----~~~r~~lI~~~~~~G~~---v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~ 176 (254)
+.++.++++||+.||++..... .+ ..+..++-+.++++|++ +.+-.+... ...+.+ .|++
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~~~~~~-~~~l~~-~d~~---------- 102 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKISTNVGATR-TFDPSS-NYPE---------- 102 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEECCCCS-SSCTTC-SSHH----------
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEEEeccCC-CCCCCC-CCHH----------
Confidence 8999999999999999865432 22 36777888899999999 665222210 011111 1110
Q ss_pred ccccccCHHHHHHHHHHHHHcCCcEEEEe
Q 025344 177 STEYVEDVDLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 177 ~~~~~~d~~~~i~~~~~dLeAGA~~ViiE 205 (254)
......+.+.+.++..-+.||..|+..
T Consensus 103 --~r~~~~~~~~~~i~~A~~lG~~~v~~~ 129 (335)
T 2qw5_A 103 --QRQEALEYLKSRVDITAALGGEIMMGP 129 (335)
T ss_dssp --HHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred --HHHHHHHHHHHHHHHHHHcCCCEEecc
Confidence 001124556666666667899999654
No 73
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=91.13 E-value=0.75 Score=41.59 Aligned_cols=79 Identities=22% Similarity=0.367 Sum_probs=54.8
Q ss_pred HHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHH
Q 025344 110 CKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (254)
Q Consensus 110 ~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~ 189 (254)
.+. |.++|-|-||. ...+.|+.+.+.|.+|.-.+|.+-. + + ..++.+... .......+++|+
T Consensus 116 ~ka-Ga~aVklEdg~------~~~~~i~~l~~~GIpv~gHlgltPq-~-~-----~~~gg~~vq----grt~~~a~~~i~ 177 (275)
T 3vav_A 116 MRA-GAQMVKFEGGE------WLAETVRFLVERAVPVCAHVGLTPQ-S-V-----HAFGGFKVQ----GKTEAGAAQLLR 177 (275)
T ss_dssp HHT-TCSEEEEECCG------GGHHHHHHHHHTTCCEEEEEESCGG-G-H-----HHHC---CC----CCSHHHHHHHHH
T ss_pred HHc-CCCEEEECCch------hHHHHHHHHHHCCCCEEEecCCCce-E-E-----eccCCeEEE----cCCHHHHHHHHH
Confidence 344 99999999994 4478899999999999988887421 0 0 000111100 000123689999
Q ss_pred HHHHHHHcCCcEEEEec
Q 025344 190 RAERCLEAGADMIMIDS 206 (254)
Q Consensus 190 ~~~~dLeAGA~~ViiEa 206 (254)
+++..-+|||+.|.+|+
T Consensus 178 rA~a~~eAGA~~ivlE~ 194 (275)
T 3vav_A 178 DARAVEEAGAQLIVLEA 194 (275)
T ss_dssp HHHHHHHHTCSEEEEES
T ss_pred HHHHHHHcCCCEEEecC
Confidence 99999999999999997
No 74
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=91.12 E-value=2.1 Score=37.75 Aligned_cols=49 Identities=10% Similarity=-0.006 Sum_probs=35.0
Q ss_pred ChhHHHHHHHHHHhC-Cceec----CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc
Q 025344 68 PKPFIEEVVKRAHQH-DVYVS----TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS 124 (254)
Q Consensus 68 ~~~~l~eKi~l~~~~-gV~v~----~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt 124 (254)
+.+.+.+.++-.++. ++++. ++ | ....+.++.+.+.+.|.+.|-+++.+
T Consensus 142 ~~e~~~~iv~~vr~~~~~Pv~vKi~~~-~-------~~~~~~~~a~~~~~~G~d~i~v~~~~ 195 (311)
T 1jub_A 142 DFEATEKLLKEVFTFFTKPLGVKLPPY-F-------DLVHFDIMAEILNQFPLTYVNSVNSI 195 (311)
T ss_dssp CHHHHHHHHHHHTTTCCSCEEEEECCC-C-------SHHHHHHHHHHHTTSCCCEEEECCCE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCC-C-------CHHHHHHHHHHHHHcCCcEEEecCCC
Confidence 556678888888876 55443 33 2 11146778889999999999999986
No 75
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=91.01 E-value=0.56 Score=39.69 Aligned_cols=100 Identities=14% Similarity=0.068 Sum_probs=71.6
Q ss_pred HHHHHHhhccc-ccEEeecCccc-ccCChhHHHHHHHHHHhCCceecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 025344 43 LEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIEEVVKRAHQHDVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (254)
Q Consensus 43 ~~DlLe~ag~y-ID~lKfg~GT~-~l~~~~~l~eKi~l~~~~gV~v~~-Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (254)
+++.++.+.+. .|.+=+..... .-++.+.+++..++++++|+.++. +.+.. +..+.+++.++.|+++|.+.|=
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~----~~~~~~~~~i~~A~~lGa~~v~ 107 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM----KSEEEIDRAFDYAKRVGVKLIV 107 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE----CSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc----CCHHHHHHHHHHHHHhCCCEEE
Confidence 45555555444 67777765421 113455688999999999998775 32211 2334789999999999999999
Q ss_pred ecCCcccCChhHHHHHHHHHHHcCCcccceee
Q 025344 120 LNVGSLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 120 ISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g 151 (254)
+.-| .+...++.+.+++.|.++.-|-.
T Consensus 108 ~~p~-----~~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 108 GVPN-----YELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp EEEC-----GGGHHHHHHHHHHHTCEEEEECC
T ss_pred ecCC-----HHHHHHHHHHHHHcCCEEEEecC
Confidence 8654 57778999999999999877765
No 76
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=90.95 E-value=3.1 Score=37.16 Aligned_cols=130 Identities=11% Similarity=0.133 Sum_probs=87.6
Q ss_pred chhHHHHHHHhh-cccccEEeecCcccccC--ChhHHHHHHHHHHh-CCceec--CCcHHHHHHHhCCchHHHHHHHHHH
Q 025344 39 SHNVLEDIFESM-GQFVDGLKFSGGSHSLM--PKPFIEEVVKRAHQ-HDVYVS--TGDWAEHLIRNGPSAFKEYVEDCKQ 112 (254)
Q Consensus 39 g~~~~~DlLe~a-g~yID~lKfg~GT~~l~--~~~~l~eKi~l~~~-~gV~v~--~Gtl~E~a~~qg~~~~~~yl~~~k~ 112 (254)
.+.++.+.++.+ ..-+.-+-|..|....+ +.+.+.+.++..++ +++.++ +|. .-++.++.+++
T Consensus 92 s~eei~~~~~~~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i~i~~s~g~-----------~~~e~l~~L~~ 160 (350)
T 3t7v_A 92 TMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIMISPGL-----------MDNATLLKARE 160 (350)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCSCEEEECSS-----------CCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCceEEEeCCC-----------CCHHHHHHHHH
Confidence 344444444433 23366777777764443 35567888888875 466444 231 34677888899
Q ss_pred cCCCEEEecCCcc----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccccc
Q 025344 113 VGFDTIELNVGSL----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (254)
Q Consensus 113 lGF~~IEISdGti----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~ 182 (254)
.|++.+-+|--+. ..+.+++.+.++.+++.|+++.+ +.-.+. . +
T Consensus 161 aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~--~~i~Gl------g------------------e 214 (350)
T 3t7v_A 161 KGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVED--GILTGV------G------------------N 214 (350)
T ss_dssp TTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEE--EEEESS------S------------------C
T ss_pred cCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEcc--ceEeec------C------------------C
Confidence 9999988766554 36788999999999999997544 554332 1 1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEe
Q 025344 183 DVDLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiE 205 (254)
+.+++++.++.-.+.+.+.|-+=
T Consensus 215 t~e~~~~~l~~l~~l~~~~v~~~ 237 (350)
T 3t7v_A 215 DIESTILSLRGMSTNDPDMVRVM 237 (350)
T ss_dssp CHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CHHHHHHHHHHHHhCCCCEEEec
Confidence 47888888888889999977653
No 77
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=90.89 E-value=0.51 Score=42.84 Aligned_cols=97 Identities=18% Similarity=0.261 Sum_probs=65.8
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHH
Q 025344 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVD 185 (254)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~ 185 (254)
-.+..++-|.++|-|-|| ++....|+.+.+.|..|.-.+|..-.. + ..++.+... .... ..+
T Consensus 118 a~rl~~eaGa~aVklEdg------~e~~~~I~al~~agIpV~gHiGLtPqs--v-----~~~ggf~v~----grt~-~a~ 179 (281)
T 1oy0_A 118 ATRFLKDGGAHAVKLEGG------ERVAEQIACLTAAGIPVMAHIGFTPQS--V-----NTLGGFRVQ----GRGD-AAE 179 (281)
T ss_dssp HHHHHHTTCCSEEEEEBS------GGGHHHHHHHHHHTCCEEEEEECCC-------------------------CH-HHH
T ss_pred HHHHHHHhCCeEEEECCc------HHHHHHHHHHHHCCCCEEeeecCCcce--e-----cccCCeEEE----eCcH-HHH
Confidence 355668899999999999 366788999999999888888874211 1 000111110 0001 368
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 186 LLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 186 ~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
++|+.++...+|||+.|.+|+- ..++.++|.++++
T Consensus 180 ~~i~rA~a~~eAGA~~ivlE~v---------p~~~a~~it~~l~ 214 (281)
T 1oy0_A 180 QTIADAIAVAEAGAFAVVMEMV---------PAELATQITGKLT 214 (281)
T ss_dssp HHHHHHHHHHHHTCSEEEEESC---------CHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHcCCcEEEEecC---------CHHHHHHHHHhCC
Confidence 9999999999999999999972 2456666666665
No 78
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=90.80 E-value=0.94 Score=37.99 Aligned_cols=48 Identities=4% Similarity=-0.081 Sum_probs=33.5
Q ss_pred HHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC
Q 025344 76 VKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG 123 (254)
Q Consensus 76 i~l~~~~-gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdG 123 (254)
++.++++ ||.+.|.|-.+....+-.+.++..+..+.+.||+.+-++..
T Consensus 93 i~~~~~~~gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~ 141 (208)
T 2czd_A 93 VMAVKELGEIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT 141 (208)
T ss_dssp HHHHHTTSEEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS
T ss_pred HHHHHHhCCcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC
Confidence 5566666 99888876333221100238999999999999999988865
No 79
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=90.65 E-value=0.97 Score=40.85 Aligned_cols=97 Identities=13% Similarity=0.174 Sum_probs=67.3
Q ss_pred HHHHHHcCCCEEEecCCcccC--------Ch----hHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccC
Q 025344 107 VEDCKQVGFDTIELNVGSLEI--------PE----ETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i--------~~----~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~ 174 (254)
++.+.+.|.+.|-|...+-++ +. +.-.+.|+.+++.|++|-..+..- ++...+
T Consensus 87 i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~-----~~~~~~---------- 151 (307)
T 1ydo_A 87 LENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTV-----FGCPYE---------- 151 (307)
T ss_dssp HHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECT-----TCBTTT----------
T ss_pred HHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEE-----ecCCcC----------
Confidence 677777899999997644332 22 334678999999999874332221 110111
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 175 ~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
+..|++.+++.+++..++||+.|. |+|..|-..+..+.++++.+
T Consensus 152 -----~~~~~~~~~~~~~~~~~~Ga~~i~-----l~DT~G~~~P~~v~~lv~~l 195 (307)
T 1ydo_A 152 -----KDVPIEQVIRLSEALFEFGISELS-----LGDTIGAANPAQVETVLEAL 195 (307)
T ss_dssp -----BCCCHHHHHHHHHHHHHHTCSCEE-----EECSSCCCCHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHhcCCCEEE-----EcCCCCCcCHHHHHHHHHHH
Confidence 122689999999999999999664 57888888888888877654
No 80
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=90.60 E-value=0.93 Score=41.01 Aligned_cols=90 Identities=18% Similarity=0.295 Sum_probs=61.8
Q ss_pred cCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHH
Q 025344 113 VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAE 192 (254)
Q Consensus 113 lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~ 192 (254)
-|.++|-|-|| ++....|+.+.+.|..|.-.+|..-.. + ..++.+.. .... ...+++|++++
T Consensus 107 aGa~aVklEdg------~e~~~~I~al~~agIpV~gHiGLtPQs--~-----~~~ggf~v----~grt-~~a~~~i~rA~ 168 (275)
T 1o66_A 107 AGAHMVKLEGG------VWMAETTEFLQMRGIPVCAHIGLTPQS--V-----FAFGGYKV----QGRG-GKAQALLNDAK 168 (275)
T ss_dssp TTCSEEEEECS------GGGHHHHHHHHHTTCCEEEEEESCGGG--T-----TC----------------CHHHHHHHHH
T ss_pred cCCcEEEECCc------HHHHHHHHHHHHcCCCeEeeeccCcee--e-----cccCCeEE----EeCh-HHHHHHHHHHH
Confidence 89999999999 366788999999999998888864211 1 00011110 0001 23689999999
Q ss_pred HHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 193 RCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 193 ~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
...+|||+.|.+|+- ..++.++|.++++
T Consensus 169 a~~eAGA~~ivlE~v---------p~~~a~~it~~l~ 196 (275)
T 1o66_A 169 AHDDAGAAVVLMECV---------LAELAKKVTETVS 196 (275)
T ss_dssp HHHHTTCSEEEEESC---------CHHHHHHHHHHCS
T ss_pred HHHHcCCcEEEEecC---------CHHHHHHHHHhCC
Confidence 999999999999982 2355666666665
No 81
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=90.55 E-value=1.3 Score=43.55 Aligned_cols=146 Identities=10% Similarity=0.112 Sum_probs=99.2
Q ss_pred hcccccEEeecCcccccCChhHHHHHHHHHHhCCcee--cCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC
Q 025344 50 MGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV--STGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI 127 (254)
Q Consensus 50 ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v--~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i 127 (254)
...=+|.+-+-..++-+ +.+++-|+.++++|..+ +... |......++.+-+..+.+.++|.+.|=|.|-.--+
T Consensus 127 ~~aGvd~vrIf~s~sd~---~ni~~~i~~ak~~G~~v~~~i~~--~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~ 201 (539)
T 1rqb_A 127 AENGMDVFRVFDAMNDP---RNMAHAMAAVKKAGKHAQGTICY--TISPVHTVEGYVKLAGQLLDMGADSIALKDMAALL 201 (539)
T ss_dssp HHTTCCEEEECCTTCCT---HHHHHHHHHHHHTTCEEEEEEEC--CCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCC
T ss_pred HhCCCCEEEEEEehhHH---HHHHHHHHHHHHCCCeEEEEEEe--eeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCc
Confidence 33448888887766665 45999999999999966 2110 00112233456666777788999999999988888
Q ss_pred ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 128 PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 128 ~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
.+.+-.++|+.++++ +.....+++- +-.|...-+-.+...++|||+.| ++-
T Consensus 202 ~P~~v~~lv~~l~~~-~p~~i~I~~H--------------------------~Hnd~GlAvAN~laAveAGa~~V--D~t 252 (539)
T 1rqb_A 202 KPQPAYDIIKAIKDT-YGQKTQINLH--------------------------CHSTTGVTEVSLMKAIEAGVDVV--DTA 252 (539)
T ss_dssp CHHHHHHHHHHHHHH-HCTTCCEEEE--------------------------EBCTTSCHHHHHHHHHHTTCSEE--EEB
T ss_pred CHHHHHHHHHHHHHh-cCCCceEEEE--------------------------eCCCCChHHHHHHHHHHhCCCEE--EEe
Confidence 888888999999884 1001123331 11123334778888999999955 664
Q ss_pred --cccccCCCccHHHHHHHHhccC
Q 025344 208 --DVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 208 --gi~d~~g~~r~d~i~~ii~~l~ 229 (254)
|+=...||...+.+-..+...|
T Consensus 253 i~g~GertGN~~lE~lv~~L~~~g 276 (539)
T 1rqb_A 253 ISSMSLGPGHNPTESVAEMLEGTG 276 (539)
T ss_dssp CGGGCSTTSBCBHHHHHHHTTTSS
T ss_pred ccccCCCccChhHHHHHHHHHhcC
Confidence 7777789998887776666554
No 82
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=90.52 E-value=0.84 Score=42.53 Aligned_cols=141 Identities=13% Similarity=0.094 Sum_probs=97.7
Q ss_pred ccEEeecCcccccCCh-----------hHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 025344 54 VDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (254)
Q Consensus 54 ID~lKfg~GT~~l~~~-----------~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISd 122 (254)
+|.+-+-..+|-++.+ +.+.+-++.++++|..|..+ .|.+...+++.+-+.++.+.+.|.+.|-|.|
T Consensus 101 ~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~--~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~D 178 (370)
T 3rmj_A 101 KKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFS--CEDALRSEIDFLAEICGAVIEAGATTINIPD 178 (370)
T ss_dssp SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEE--EETGGGSCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEe--cCCCCccCHHHHHHHHHHHHHcCCCEEEecC
Confidence 5666665555554321 23455788999999876544 2333344555677888889999999999999
Q ss_pred CcccCChhHHHHHHHHHHHcCCcc--cceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCc
Q 025344 123 GSLEIPEETLLRYVRLVKSAGLKA--KPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD 200 (254)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~G~~v--~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~ 200 (254)
-.--+.+.+-.++|+.+++. +.. ...+++- +-.|...-+-.+...++|||+
T Consensus 179 T~G~~~P~~~~~lv~~l~~~-~~~~~~~~l~~H--------------------------~Hnd~GlAvAN~laAv~aGa~ 231 (370)
T 3rmj_A 179 TVGYSIPYKTEEFFRELIAK-TPNGGKVVWSAH--------------------------CHNDLGLAVANSLAALKGGAR 231 (370)
T ss_dssp SSSCCCHHHHHHHHHHHHHH-STTGGGSEEEEE--------------------------CBCTTSCHHHHHHHHHHTTCC
T ss_pred ccCCcCHHHHHHHHHHHHHh-CCCcCceEEEEE--------------------------eCCCCChHHHHHHHHHHhCCC
Confidence 99888888888999999884 110 0123331 122334447788889999999
Q ss_pred EEEEecc--cccccCCCccHHHHHHHH
Q 025344 201 MIMIDSD--DVCKHADSLRADIIAKVI 225 (254)
Q Consensus 201 ~ViiEar--gi~d~~g~~r~d~i~~ii 225 (254)
.| ++- |+=...||...+.+-..+
T Consensus 232 ~v--d~tv~GlGeraGN~~lE~vv~~L 256 (370)
T 3rmj_A 232 QV--ECTVNGLGERAGNASVEEIVMAL 256 (370)
T ss_dssp EE--EEBGGGCSSTTCBCBHHHHHHHH
T ss_pred EE--EEeccccCcccccccHHHHHHHH
Confidence 64 664 888899999988766554
No 83
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=90.43 E-value=0.25 Score=41.78 Aligned_cols=85 Identities=15% Similarity=0.312 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc--CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLE--IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~--i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~ 179 (254)
.+++.++.++++||+.||+...... ++..+..++.+.+++.|+++.+ ++.-. .+.+ .|+.
T Consensus 17 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~---~~~~-~~~~------------- 78 (281)
T 3u0h_A 17 SLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLAN-LGLPL---NLYD-SEPV------------- 78 (281)
T ss_dssp CHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECC-EECCS---CTTS-CHHH-------------
T ss_pred CHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEE-ecccc---cccC-CCHH-------------
Confidence 6889999999999999999865431 2345567888889999998754 33211 1110 1111
Q ss_pred cccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 180 YVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 180 ~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
....++.+.+.++..-+.||..|.+
T Consensus 79 ~~~~~~~~~~~i~~A~~lG~~~v~~ 103 (281)
T 3u0h_A 79 FLRELSLLPDRARLCARLGARSVTA 103 (281)
T ss_dssp HHHHHHTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 0112445556666667789999985
No 84
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=90.25 E-value=1.3 Score=40.50 Aligned_cols=93 Identities=11% Similarity=0.152 Sum_probs=67.5
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~ 182 (254)
..++++.|.+.|.+.|-|.+-.-++ +.-.++|+.+++.|+.| ++...+.. ..
T Consensus 95 ~~~~i~~a~~aGvd~v~I~~~~s~~--~~~~~~i~~ak~~G~~v--~~~~~~a~------------------------~~ 146 (345)
T 1nvm_A 95 SVHDLKNAYQAGARVVRVATHCTEA--DVSKQHIEYARNLGMDT--VGFLMMSH------------------------MI 146 (345)
T ss_dssp CHHHHHHHHHHTCCEEEEEEETTCG--GGGHHHHHHHHHHTCEE--EEEEESTT------------------------SS
T ss_pred cHHHHHHHHhCCcCEEEEEEeccHH--HHHHHHHHHHHHCCCEE--EEEEEeCC------------------------CC
Confidence 4678999999999999997422111 45568999999999875 44542110 11
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
+++.+.+.++...++||+.|- ++|..|...+..+.++++.+
T Consensus 147 ~~e~~~~ia~~~~~~Ga~~i~-----l~DT~G~~~P~~v~~lv~~l 187 (345)
T 1nvm_A 147 PAEKLAEQGKLMESYGATCIY-----MADSGGAMSMNDIRDRMRAF 187 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEE-----EECTTCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEE-----ECCCcCccCHHHHHHHHHHH
Confidence 588899999999999999764 57777877777777776543
No 85
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.12 E-value=2.1 Score=38.02 Aligned_cols=76 Identities=12% Similarity=0.084 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc---cCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL---EIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti---~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-.|- .|+.++|.++++.+.+. | ..|+ .|+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi--aGv----------------------- 77 (291)
T 3tak_A 23 SLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPII--AGT----------------------- 77 (291)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE--EEC-----------------------
T ss_pred HHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEE--EeC-----------------------
Confidence 577888888999999996544333 78999999999999883 1 1111 122
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+..+..+.|++++..-++|||-|++=.
T Consensus 78 ----g~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 78 ----GANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp ----CCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred ----CCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 112478889999999999999999876
No 86
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=90.09 E-value=0.92 Score=38.96 Aligned_cols=133 Identities=11% Similarity=0.109 Sum_probs=75.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee--ecC--CCCCCCccccccccccccCCCc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV--MFN--KSDIPSDRDRAFGAYVARAPRS 177 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~--k~~--~s~v~~~~d~~~~~~~~~~~~~ 177 (254)
.+++.++.++++||+.||+..... ...+..++-+.+++.|+++.+ ++. .++ ...+.+ .|+.
T Consensus 42 ~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~~~l~~~gl~~~~-~~~~~p~~~~~~~l~~-~d~~----------- 106 (290)
T 2zvr_A 42 DLRKGMELAKRVGYQAVEIAVRDP--SIVDWNEVKILSEELNLPICA-IGTGQAYLADGLSLTH-PNDE----------- 106 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECSCG--GGSCHHHHHHHHHHHTCCEEE-EECTHHHHTTCCCTTC-SSHH-----------
T ss_pred CHHHHHHHHHHhCCCEEEEcCCCc--chhhHHHHHHHHHHcCCeEEE-EeccCccccCCCCCCC-CCHH-----------
Confidence 688999999999999999986532 235566888889999999754 222 100 001110 1110
Q ss_pred cccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHH-------HHHHHhccCCCceEEecC---------Cch
Q 025344 178 TEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADI-------IAKVIGRLGLEKTMFEAT---------NPR 241 (254)
Q Consensus 178 ~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~-------i~~ii~~l~~~klifEAP---------~k~ 241 (254)
......+.+.+.++..-+.||..|+.-..|.+. +.-+.+. +.++.+...-=+|.+|.- ...
T Consensus 107 -~r~~~~~~~~~~i~~A~~lG~~~v~~~~~g~~~--~~~~~~~~~~~~~~l~~l~~~a~~v~l~lEn~~~~~~~~~~~~~ 183 (290)
T 2zvr_A 107 -IRKKAIERVVKHTEVAGMFGALVIIGLVRGRRE--GRSYEETEELFIESMKRLLELTEHAKFVIEPLNRYETDFINTID 183 (290)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTCEEEESGGGCCCT--TSCHHHHHHHHHHHHHHHHHHCSSCCEEECCCCTTTCSSCCSHH
T ss_pred -HHHHHHHHHHHHHHHHHHcCCCEEEecCCCCCC--CcCHHHHHHHHHHHHHHHHHHhccCEEEEEeCCCcCccccCCHH
Confidence 001124556666666677899998832124321 2222222 223322111146888863 455
Q ss_pred hHHHHHHHhCC
Q 025344 242 TSEWFIRRYGP 252 (254)
Q Consensus 242 qQ~~~I~~~Gp 252 (254)
+-..++++.|+
T Consensus 184 ~~~~l~~~~~~ 194 (290)
T 2zvr_A 184 DALRILRKINS 194 (290)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHcCC
Confidence 66678888873
No 87
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=90.02 E-value=1.3 Score=39.81 Aligned_cols=143 Identities=12% Similarity=0.126 Sum_probs=86.7
Q ss_pred HHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhC-CchHHHHHHHHHHcCCCEEEec
Q 025344 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNG-PSAFKEYVEDCKQVGFDTIELN 121 (254)
Q Consensus 43 ~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg-~~~~~~yl~~~k~lGF~~IEIS 121 (254)
+-+.|..+| +|.+=.||..+.=-+.+.+++..+.. -++.+.. +.++ +..++..++.++..|.+.|-|.
T Consensus 32 i~~~L~~~G--v~~IE~g~p~~~~~d~e~v~~i~~~~--~~~~i~~-------l~~~~~~di~~a~~~~~~ag~~~v~i~ 100 (293)
T 3ewb_X 32 IALQLEKLG--IDVIEAGFPISSPGDFECVKAIAKAI--KHCSVTG-------LARCVEGDIDRAEEALKDAVSPQIHIF 100 (293)
T ss_dssp HHHHHHHHT--CSEEEEECGGGCHHHHHHHHHHHHHC--CSSEEEE-------EEESSHHHHHHHHHHHTTCSSEEEEEE
T ss_pred HHHHHHHcC--CCEEEEeCCCCCccHHHHHHHHHHhc--CCCEEEE-------EecCCHHHHHHHHHHHhhcCCCEEEEE
Confidence 344455566 77778888654322223344433322 2343321 1111 1146666776777899988876
Q ss_pred CCccc--------CChh----HHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHH
Q 025344 122 VGSLE--------IPEE----TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (254)
Q Consensus 122 dGti~--------i~~~----~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~ 189 (254)
..+-+ .+.+ .-.+.|+.+++.|+.|. |+..+. +..|++.+++
T Consensus 101 ~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~--~~~~d~------------------------~~~~~~~~~~ 154 (293)
T 3ewb_X 101 LATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQ--FSPEDA------------------------TRSDRAFLIE 154 (293)
T ss_dssp EECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEE--EEEETG------------------------GGSCHHHHHH
T ss_pred ecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEE--EEeccC------------------------CCCCHHHHHH
Confidence 54432 2222 34577888999887753 444211 1125899999
Q ss_pred HHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhc
Q 025344 190 RAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 227 (254)
Q Consensus 190 ~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~ 227 (254)
.+++..++||+.| .|+|..|-..+..+.++++.
T Consensus 155 ~~~~~~~~G~~~i-----~l~DT~G~~~P~~v~~lv~~ 187 (293)
T 3ewb_X 155 AVQTAIDAGATVI-----NIPDTVGYTNPTEFGQLFQD 187 (293)
T ss_dssp HHHHHHHTTCCEE-----EEECSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEE-----EecCCCCCCCHHHHHHHHHH
Confidence 9999999999976 47888888888877777643
No 88
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=89.93 E-value=1.2 Score=40.34 Aligned_cols=54 Identities=19% Similarity=0.188 Sum_probs=41.7
Q ss_pred HHHHHHHHHcCCCEEEe------cCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCC
Q 025344 104 KEYVEDCKQVGFDTIEL------NVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDI 159 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEI------SdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v 159 (254)
++.++.+|++|+++|-+ +.|..+ .+.-++++++++++||+|+-.|...+...++
T Consensus 30 ~~~~~ilk~~G~n~vRlri~v~P~~g~~d--~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP 89 (334)
T 1fob_A 30 QALETILADAGINSIRQRVWVNPSDGSYD--LDYNLELAKRVKAAGMSLYLDLHLSDTWADP 89 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEECSCCTTCTTC--HHHHHHHHHHHHHTTCEEEEEECCSSSCCBT
T ss_pred chHHHHHHHcCCCEEEEEEEECCCCCccC--HHHHHHHHHHHHHCCCEEEEEeccCCCCCCc
Confidence 45688899999999999 355433 5677789999999999999998875433333
No 89
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=89.93 E-value=1.7 Score=38.86 Aligned_cols=110 Identities=15% Similarity=0.217 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCC-cccceeeeecCCCCCCCccccccccccccCCCc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGL-KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~-~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~ 177 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.-= ++.-=+|+
T Consensus 25 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv------------------------- 79 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV------------------------- 79 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE-------------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-------------------------
Confidence 57888899999999999886543 57999999999999998411 11111222
Q ss_pred cccccCHHHHHHHHHHHHHcCCcEEEEecccccc-cCCCccHHHHHHHHhcc---CCCceEEecC
Q 025344 178 TEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCK-HADSLRADIIAKVIGRL---GLEKTMFEAT 238 (254)
Q Consensus 178 ~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d-~~g~~r~d~i~~ii~~l---~~~klifEAP 238 (254)
+..+..+.|++++..-++|||-|++=.--.+. ..-+---+-..+|++.. ++-=++.--|
T Consensus 80 --g~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P 142 (294)
T 3b4u_A 80 --LVDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIP 142 (294)
T ss_dssp --CCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECH
T ss_pred --CCccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 11247888999999999999999997653333 11111112234566666 5555666665
No 90
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=89.78 E-value=1.8 Score=38.48 Aligned_cols=108 Identities=12% Similarity=0.111 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.-=.|+ +|+ | .
T Consensus 20 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi--~Gv-------g--~--------------- 73 (286)
T 2r91_A 20 LFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVI--VQV-------A--S--------------- 73 (286)
T ss_dssp HHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEE--EEC-------C--C---------------
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEE--Eee-------C--C---------------
Confidence 57888899999999999886543 47999999999999988411111 222 1 1
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEecccccc-cCCCccHHHHHHHHhccCCCceEEecC
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCK-HADSLRADIIAKVIGRLGLEKTMFEAT 238 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d-~~g~~r~d~i~~ii~~l~~~klifEAP 238 (254)
.+..+.|++++..-++|||.|++=.--.+. ..-+---+-..+|++..++-=++.--|
T Consensus 74 ---~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P 131 (286)
T 2r91_A 74 ---LNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYP 131 (286)
T ss_dssp ---SSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred ---CCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCh
Confidence 147888999999999999999997653332 111111222345666666655666655
No 91
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=89.77 E-value=1.4 Score=40.47 Aligned_cols=87 Identities=17% Similarity=0.201 Sum_probs=51.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc--c------c----------CChhHHHH----HHHHHHHcCCcccce--eeeecCCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS--L------E----------IPEETLLR----YVRLVKSAGLKAKPK--FAVMFNKS 157 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt--i------~----------i~~~~r~~----lI~~~~~~G~~v~~E--~g~k~~~s 157 (254)
.|-+--+.|++.|||.|||.-+. + + =+.+.|.| +|+.+++. +-++ +++|
T Consensus 159 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~a---vg~d~pV~vR---- 231 (363)
T 3l5l_A 159 DFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREV---WPENLPLTAR---- 231 (363)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTT---SCTTSCEEEE----
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHH---cCCCceEEEE----
Confidence 34444456778899999997542 1 0 12355644 55555552 1111 3443
Q ss_pred CCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEeccc
Q 025344 158 DIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD 208 (254)
Q Consensus 158 ~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEarg 208 (254)
++|.+|...+..+.++.++.++..-++|+++|-+=+.+
T Consensus 232 -------------is~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~ 269 (363)
T 3l5l_A 232 -------------FGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGF 269 (363)
T ss_dssp -------------EEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred -------------ecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 33333322222367888999999999999999886543
No 92
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=89.72 E-value=1.7 Score=39.72 Aligned_cols=96 Identities=18% Similarity=0.269 Sum_probs=67.8
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~ 171 (254)
+-+-.+.+.+.|..+|-|=|+.. -+|.++-++-|+.+++.| +.|-+.- ..|.
T Consensus 106 v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~----~~~~I~A-------Rtda------ 168 (305)
T 3ih1_A 106 VARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVA----PSLYIVA-------RTDA------ 168 (305)
T ss_dssp HHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHC----TTSEEEE-------EECC------
T ss_pred HHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcC----CCeEEEE-------eecc------
Confidence 33445666778999999999864 367788888888888863 2344420 1111
Q ss_pred ccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCC
Q 025344 172 ARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGL 230 (254)
Q Consensus 172 ~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~ 230 (254)
......++.|++++...+||||.|.+|+- -..+++.+|.+.++.
T Consensus 169 -------~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~--------~~~~~~~~i~~~~~~ 212 (305)
T 3ih1_A 169 -------RGVEGLDEAIERANAYVKAGADAIFPEAL--------QSEEEFRLFNSKVNA 212 (305)
T ss_dssp -------HHHHCHHHHHHHHHHHHHHTCSEEEETTC--------CSHHHHHHHHHHSCS
T ss_pred -------ccccCHHHHHHHHHHHHHcCCCEEEEcCC--------CCHHHHHHHHHHcCC
Confidence 01224889999999999999999999984 135778888877763
No 93
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=89.67 E-value=2.6 Score=38.13 Aligned_cols=123 Identities=12% Similarity=0.094 Sum_probs=81.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ +|+
T Consensus 44 ~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVi--aGv----------------------- 98 (315)
T 3si9_A 44 AFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVV--AGA----------------------- 98 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBE--EEC-----------------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEE--EeC-----------------------
Confidence 6788888999999999965443 3489999999999999873 1 1111 122
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEecc-------------------------ccccc----CCCccHHHHHHHHh
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIG 226 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar-------------------------gi~d~----~g~~r~d~i~~ii~ 226 (254)
+..+..+.|++++..-++|||-|++=.- -+|+. .-++..+.+.++.+
T Consensus 99 ----g~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 99 ----GSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp ----CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 1124788899999999999999998662 12542 33566777777775
Q ss_pred ccC-CCceEEecCCchhHHHHHHHhCCC
Q 025344 227 RLG-LEKTMFEATNPRTSEWFIRRYGPK 253 (254)
Q Consensus 227 ~l~-~~klifEAP~k~qQ~~~I~~~Gp~ 253 (254)
+.| +-=+=.-..+-.+...++++.+++
T Consensus 175 ~~pnIvgiKdssgd~~~~~~l~~~~~~~ 202 (315)
T 3si9_A 175 DFKNIIGVKDATGKIERASEQREKCGKD 202 (315)
T ss_dssp HCTTEEEEEECSCCTHHHHHHHHHHCSS
T ss_pred hCCCEEEEEeCCCCHHHHHHHHHHcCCC
Confidence 454 111112234555666666666654
No 94
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=89.65 E-value=7.8 Score=35.43 Aligned_cols=183 Identities=15% Similarity=0.168 Sum_probs=108.4
Q ss_pred chhHHHHHHHhhccc--ccEEeecCcccccCChhHHHHHHHHHHh--CCceecC----CcHHHHHHHhCCchHHHHHHHH
Q 025344 39 SHNVLEDIFESMGQF--VDGLKFSGGSHSLMPKPFIEEVVKRAHQ--HDVYVST----GDWAEHLIRNGPSAFKEYVEDC 110 (254)
Q Consensus 39 g~~~~~DlLe~ag~y--ID~lKfg~GT~~l~~~~~l~eKi~l~~~--~gV~v~~----Gtl~E~a~~qg~~~~~~yl~~~ 110 (254)
.+..++.+++.|-+- ==+|-++-|+...++.+.+...+..+.+ ++|+|.. |.-+| .+..|
T Consensus 26 n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~e------------~~~~a 93 (307)
T 3n9r_A 26 NFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTFE------------SCEKA 93 (307)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEECSHH------------HHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHH------------HHHHH
Confidence 345555666554321 1135555555555555666666665544 6787775 43333 34456
Q ss_pred HHcCCCEEEecCCcccCChh--HHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccc----ccccccCCCccccccCH
Q 025344 111 KQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF----GAYVARAPRSTEYVEDV 184 (254)
Q Consensus 111 k~lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~----~~~~~~~~~~~~~~~d~ 184 (254)
-+.||+.|=|.-...++.+- .=.++++.+...|.-|--|+|.=-+ ..|... +..+| ||
T Consensus 94 i~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG------~Ed~~~~~~~~~~yT----------~P 157 (307)
T 3n9r_A 94 VKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMG------IEDNISVDEKDAVLV----------NP 157 (307)
T ss_dssp HHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCC------C----------CCSC----------CH
T ss_pred HHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeecc------ccCCcccccccccCC----------CH
Confidence 78999999996655544322 2237788899999999999998321 121100 01123 67
Q ss_pred HHHHHHHHHHHHcCCcEEEEe---ccccccc--CCCccHHHHHHHHhccCCCceEEecC--CchhHHHHHHHhCCC
Q 025344 185 DLLIRRAERCLEAGADMIMID---SDDVCKH--ADSLRADIIAKVIGRLGLEKTMFEAT--NPRTSEWFIRRYGPK 253 (254)
Q Consensus 185 ~~~i~~~~~dLeAGA~~ViiE---argi~d~--~g~~r~d~i~~ii~~l~~~klifEAP--~k~qQ~~~I~~~Gp~ 253 (254)
++..+.+++ -|.|.+=+= +-|.|.. +-.++.|.+++|-+..+.- |.+=-- -|+.-+..|+.||-+
T Consensus 158 eea~~Fv~~---TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~~~P-LVlHGgS~vp~~~~~~~~~~gg~ 229 (307)
T 3n9r_A 158 KEAEQFVKE---SQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIP-LVLHGASAIPDNVRKSYLDAGGD 229 (307)
T ss_dssp HHHHHHHHH---HCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHHCSC-EEESSCCCCCHHHHHHHHHTTCC
T ss_pred HHHHHHHHH---HCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcCCCC-eEEeCCCCcchHHHHHHHHhcCc
Confidence 777776654 688876553 2389973 4578999999994322322 444432 355666677788754
No 95
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.59 E-value=1.3 Score=39.92 Aligned_cols=77 Identities=14% Similarity=0.158 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.- . .+-+-. -+|
T Consensus 30 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-g---rvpVia---Gvg------------------ 84 (313)
T 3dz1_A 30 SIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-K---SMQVIV---GVS------------------ 84 (313)
T ss_dssp HHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-T---TSEEEE---ECC------------------
T ss_pred HHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-C---CCcEEE---ecC------------------
Confidence 67788888889999999554333 3699999999999998852 1 111110 011
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEe
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiE 205 (254)
..+..+.|++++..-++|||.|++=
T Consensus 85 --~~~t~~ai~la~~A~~~Gadavlv~ 109 (313)
T 3dz1_A 85 --APGFAAMRRLARLSMDAGAAGVMIA 109 (313)
T ss_dssp --CSSHHHHHHHHHHHHHHTCSEEEEC
T ss_pred --CCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 1147888999999999999999994
No 96
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=89.53 E-value=2.7 Score=37.53 Aligned_cols=77 Identities=14% Similarity=0.163 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--C--CcccceeeeecCCCCCCCccccccccccccC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--G--LKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G--~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~ 174 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. | ..|+. |+ |
T Consensus 29 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia--Gv-------g-------------- 85 (301)
T 3m5v_A 29 SYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA--GA-------G-------------- 85 (301)
T ss_dssp HHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE--EC-------C--------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE--eC-------C--------------
Confidence 67888999999999999765433 479999999999999874 1 22222 22 1
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 175 ~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
..+..+.|++++..-++|||-|++=.-
T Consensus 86 ------~~~t~~ai~la~~a~~~Gadavlv~~P 112 (301)
T 3m5v_A 86 ------SNATHEAVGLAKFAKEHGADGILSVAP 112 (301)
T ss_dssp ------CSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred ------CCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 114788899999999999999999763
No 97
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.52 E-value=2.2 Score=44.30 Aligned_cols=78 Identities=10% Similarity=0.070 Sum_probs=49.7
Q ss_pred hhHHHHHHHhh-cccccEEeecC-----------cccccCChhHHHHHHHHHHhC-CceecC-CcHHHHHHHhCCchHHH
Q 025344 40 HNVLEDIFESM-GQFVDGLKFSG-----------GSHSLMPKPFIEEVVKRAHQH-DVYVST-GDWAEHLIRNGPSAFKE 105 (254)
Q Consensus 40 ~~~~~DlLe~a-g~yID~lKfg~-----------GT~~l~~~~~l~eKi~l~~~~-gV~v~~-Gtl~E~a~~qg~~~~~~ 105 (254)
+..+.++.+.+ ....|++=+-+ |.+.....+.+.+.++-.+++ ++++.. .. .+...+.+
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~-------~~~~~~~~ 719 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLT-------PNVTDIVS 719 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEEC-------SCSSCHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeC-------CChHHHHH
Confidence 34455554444 23466665544 455556778899999999887 655442 11 01124677
Q ss_pred HHHHHHHcCCCEEEecCCc
Q 025344 106 YVEDCKQVGFDTIELNVGS 124 (254)
Q Consensus 106 yl~~~k~lGF~~IEISdGt 124 (254)
+.+.+.+.|.++|-+||.+
T Consensus 720 ~a~~~~~~G~d~i~v~Nt~ 738 (1025)
T 1gte_A 720 IARAAKEGGADGVTATNTV 738 (1025)
T ss_dssp HHHHHHHHTCSEEEECCCE
T ss_pred HHHHHHHcCCCEEEEeccc
Confidence 7888899999999998754
No 98
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=89.32 E-value=1.9 Score=36.79 Aligned_cols=46 Identities=15% Similarity=0.094 Sum_probs=40.3
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
.+.|++.|.++|-|-+---.+|.++-.++++.+++.|+.++.+++-
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~ 120 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNN 120 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 7899999999999955544688888899999999999999998875
No 99
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=89.25 E-value=2.8 Score=37.85 Aligned_cols=120 Identities=14% Similarity=0.164 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. | ..|+ +|+
T Consensus 45 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVi--aGv----------------------- 99 (314)
T 3qze_A 45 SLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVI--AGT----------------------- 99 (314)
T ss_dssp HHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEE--EEC-----------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE--EeC-----------------------
Confidence 67888899999999999775333 479999999999998873 1 1111 122
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEecc-------------------------ccccc----CCCccHHHHHHHHh
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIG 226 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar-------------------------gi~d~----~g~~r~d~i~~ii~ 226 (254)
+..+..+.|++++..-++|||-|++=.- -+|+. .-++..+.+.+++
T Consensus 100 ----g~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La- 174 (314)
T 3qze_A 100 ----GANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLS- 174 (314)
T ss_dssp ----CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHH-
T ss_pred ----CCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh-
Confidence 1124788899999999999999999762 12543 2356667777776
Q ss_pred ccCCCceE--Eec-CCchhHHHHHHHhCCC
Q 025344 227 RLGLEKTM--FEA-TNPRTSEWFIRRYGPK 253 (254)
Q Consensus 227 ~l~~~kli--fEA-P~k~qQ~~~I~~~Gp~ 253 (254)
+.| +|+ =|+ ++-.+...++++.+++
T Consensus 175 ~~p--nIvgiKdssgd~~~~~~~~~~~~~~ 202 (314)
T 3qze_A 175 KVP--NIIGIKEATGDLQRAKEVIERVGKD 202 (314)
T ss_dssp TST--TEEEEEECSCCHHHHHHHHHHSCTT
T ss_pred cCC--CEEEEEcCCCCHHHHHHHHHHcCCC
Confidence 333 332 133 3445555566665554
No 100
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.19 E-value=2.7 Score=37.59 Aligned_cols=75 Identities=20% Similarity=0.115 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc----cCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL----EIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti----~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~ 174 (254)
.+.++++++-+-|.+.|=+. ||. .|+.++|.++++.+.+. | ..|+ +|+
T Consensus 26 ~l~~lv~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi--aGv---------------------- 80 (300)
T 3eb2_A 26 VMGRLCDDLIQAGVHGLTPL-GSTGEFAYLGTAQREAVVRATIEAAQRRVPVV--AGV---------------------- 80 (300)
T ss_dssp HHHHHHHHHHHTTCSCBBTT-SGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBE--EEE----------------------
T ss_pred HHHHHHHHHHHcCCCEEEEC-ccccCccccCHHHHHHHHHHHHHHhCCCCcEE--EeC----------------------
Confidence 57788888888999999544 543 69999999999999883 1 1111 122
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 175 ~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+..+..+.|++++..-++|||.|++=.
T Consensus 81 -----g~~~t~~ai~la~~a~~~Gadavlv~~ 107 (300)
T 3eb2_A 81 -----ASTSVADAVAQAKLYEKLGADGILAIL 107 (300)
T ss_dssp -----EESSHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred -----CCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 112578889999999999999999965
No 101
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=89.15 E-value=1.5 Score=38.48 Aligned_cols=97 Identities=14% Similarity=0.157 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccc--cccccCCCcc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFG--AYVARAPRST 178 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~--~~~~~~~~~~ 178 (254)
.+++.++.++++||++||+....- .....+..++-+.+++.|+++.+ ++.......+ .++... ..+.+..
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~-~~~~~~~~~~---~~p~~~~~~~~~~~~--- 102 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIIS-SHVNPVDTSI---SDPFKAMIFKYSKEV--- 102 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEE-EECCCBCTTC---SSTTTTBCCSCCTTT---
T ss_pred CHHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEE-Eecccccccc---cCcccccccccchhh---
Confidence 699999999999999999985211 02233456777888999999854 3321100000 011000 0000000
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
.....+.+-+.++..-+.||..|++-+
T Consensus 103 -~~~~~~~~~~~i~~A~~lG~~~v~~~~ 129 (303)
T 3l23_A 103 -TPKIMEYWKATAADHAKLGCKYLIQPM 129 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHTTCSEEEECS
T ss_pred -HHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 012245556666666778999999953
No 102
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=88.93 E-value=2.1 Score=38.73 Aligned_cols=92 Identities=21% Similarity=0.317 Sum_probs=62.6
Q ss_pred HHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCC
Q 025344 108 EDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (254)
Q Consensus 108 ~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~ 176 (254)
+.+-+.|..+|-|-||.. -+|.++.++-|+.+++.+- .+.|-++- ..|.. |
T Consensus 101 ~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~--~~~~~i~a-------Rtda~---------~ 162 (295)
T 1xg4_A 101 KSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKT--DPDFVIMA-------RTDAL---------A 162 (295)
T ss_dssp HHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCS--STTSEEEE-------EECCH---------H
T ss_pred HHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhcc--CCCcEEEE-------ecHHh---------h
Confidence 333457999999999962 3678888888888887642 22333320 11110 0
Q ss_pred ccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 177 ~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
....++.|++++...+||||.|.+|+.- ..+++.+|.+.++
T Consensus 163 ----~~gl~~ai~ra~ay~eAGAd~i~~e~~~--------~~~~~~~i~~~~~ 203 (295)
T 1xg4_A 163 ----VEGLDAAIERAQAYVEAGAEMLFPEAIT--------ELAMYRQFADAVQ 203 (295)
T ss_dssp ----HHCHHHHHHHHHHHHHTTCSEEEETTCC--------SHHHHHHHHHHHC
T ss_pred ----hcCHHHHHHHHHHHHHcCCCEEEEeCCC--------CHHHHHHHHHHcC
Confidence 2246899999999999999999999851 3566777776665
No 103
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=88.79 E-value=3.1 Score=37.32 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. | ..|+. |+
T Consensus 37 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia--Gv----------------------- 91 (304)
T 3l21_A 37 TAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA--GA----------------------- 91 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE--EC-----------------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE--eC-----------------------
Confidence 68888999999999999775443 479999999999998883 1 11111 22
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
+..+..+.|++++..-++|||-|++=.-
T Consensus 92 ----g~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 92 ----GTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp ----CCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred ----CCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 1124788899999999999999999763
No 104
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=88.77 E-value=1.4 Score=40.38 Aligned_cols=104 Identities=20% Similarity=0.339 Sum_probs=64.5
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc-------------ccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccc
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGS-------------LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRA 166 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt-------------i~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~ 166 (254)
+.+.+..+.+.+.|||.|||+-|+ +.-..+.-.++|+.+++. ++ | +++|.. +|. +|.
T Consensus 70 ~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~---P-V~vKiR---~g~-~~~- 140 (350)
T 3b0p_A 70 KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRV---P-VTVKMR---LGL-EGK- 140 (350)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSS---C-EEEEEE---SCB-TTC-
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCC---c-eEEEEe---cCc-Ccc-
Confidence 456667777888899999999652 233444556677777763 32 2 555422 110 110
Q ss_pred cccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEeccc---cccc-----CCCccHHHHHHHHhcc
Q 025344 167 FGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD---VCKH-----ADSLRADIIAKVIGRL 228 (254)
Q Consensus 167 ~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEarg---i~d~-----~g~~r~d~i~~ii~~l 228 (254)
.+.++.++.++...++|++.|+|-+|. -+.. ......+.+.++.+.+
T Consensus 141 ---------------~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~ 195 (350)
T 3b0p_A 141 ---------------ETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDF 195 (350)
T ss_dssp ---------------CCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHC
T ss_pred ---------------ccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhC
Confidence 135677888999999999999999872 1111 1124567777777665
No 105
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=88.76 E-value=1.4 Score=40.31 Aligned_cols=76 Identities=18% Similarity=0.242 Sum_probs=50.4
Q ss_pred CcccccCChhHHHHHHHHHHh-CCceecC----CcHHHHHHHhCC-chHHHHHHHHHHcCCCEEEecCCcccC-------
Q 025344 61 GGSHSLMPKPFIEEVVKRAHQ-HDVYVST----GDWAEHLIRNGP-SAFKEYVEDCKQVGFDTIELNVGSLEI------- 127 (254)
Q Consensus 61 ~GT~~l~~~~~l~eKi~l~~~-~gV~v~~----Gtl~E~a~~qg~-~~~~~yl~~~k~lGF~~IEISdGti~i------- 127 (254)
+|++.+-..+.+.+.++-.++ .+++|.. | |-+. .+ ....++.+.+.+.|.++|-|+.++-..
T Consensus 103 ~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g-~~~~----~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~ 177 (350)
T 3b0p_A 103 YGACLLLDLARVREILKAMGEAVRVPVTVKMRLG-LEGK----ETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKAN 177 (350)
T ss_dssp CGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESC-BTTC----CCHHHHHHHHHHHHHTTCCEEEEECSCBC--------
T ss_pred cchhHHhCHHHHHHHHHHHHHHhCCceEEEEecC-cCcc----ccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccc
Confidence 567777788889999988887 3665443 4 2221 10 135677889999999999999976421
Q ss_pred ---ChhHHHHHHHHHHHc
Q 025344 128 ---PEETLLRYVRLVKSA 142 (254)
Q Consensus 128 ---~~~~r~~lI~~~~~~ 142 (254)
+.-+ .++|+.+++.
T Consensus 178 ~~~~~~~-~~~i~~ik~~ 194 (350)
T 3b0p_A 178 REIPPLR-HDWVHRLKGD 194 (350)
T ss_dssp --CCCCC-HHHHHHHHHH
T ss_pred cCCCccc-HHHHHHHHHh
Confidence 1112 4677777773
No 106
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=88.73 E-value=1 Score=37.65 Aligned_cols=88 Identities=14% Similarity=0.117 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecC-CC--CCCCccccccccccccCCCcc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFN-KS--DIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~-~s--~v~~~~d~~~~~~~~~~~~~~ 178 (254)
.+++.++.++++||+.||+..- .. .+..++-+.+++.|+++.+ ++.-.. .. .-+...|+. .
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~-~~---~~~~~~~~~l~~~gl~~~~-~~~~~~~~~~g~~~~~~~~~--------~--- 79 (260)
T 1k77_A 16 PFIERFAAARKAGFDAVEFLFP-YN---YSTLQIQKQLEQNHLTLAL-FNTAPGDINAGEWGLSALPG--------R--- 79 (260)
T ss_dssp CGGGHHHHHHHHTCSEEECSCC-TT---SCHHHHHHHHHHTTCEEEE-EECCCCCGGGTCSCSTTCTT--------C---
T ss_pred CHHHHHHHHHHhCCCEEEecCC-CC---CCHHHHHHHHHHcCCceEE-EecCCcccccccCCCCCChh--------H---
Confidence 6888899999999999999852 12 2355677888999999875 332100 00 000001110 0
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
.....+.+.+.++..-+.||..|.+-+
T Consensus 80 -~~~~~~~~~~~i~~a~~lG~~~v~~~~ 106 (260)
T 1k77_A 80 -EHEAHADIDLALEYALALNCEQVHVMA 106 (260)
T ss_dssp -HHHHHHHHHHHHHHHHHTTCSEEECCC
T ss_pred -HHHHHHHHHHHHHHHHHcCCCEEEECc
Confidence 012355666666677778999998854
No 107
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=88.61 E-value=1.8 Score=39.41 Aligned_cols=97 Identities=21% Similarity=0.280 Sum_probs=64.8
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~ 171 (254)
+-+-.+.+.+.|..+|-|=|+.. -+|.++-++-|+.+++.-- -+.|-+. . .-|.
T Consensus 100 v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~--~~~~~I~---A----RTDa------ 164 (298)
T 3eoo_A 100 IARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDART--DETFVIM---A----RTDA------ 164 (298)
T ss_dssp HHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCS--STTSEEE---E----EECT------
T ss_pred HHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhcc--CCCeEEE---E----eehh------
Confidence 33445566678999999999874 3677777777776665310 1223331 0 1111
Q ss_pred ccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 172 ARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 172 ~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
......++.|++++...+||||.|.+|+- -..+++.++.+.++
T Consensus 165 -------~~~~gldeai~Ra~ay~~AGAD~if~~~~--------~~~ee~~~~~~~~~ 207 (298)
T 3eoo_A 165 -------AAAEGIDAAIERAIAYVEAGADMIFPEAM--------KTLDDYRRFKEAVK 207 (298)
T ss_dssp -------HHHHHHHHHHHHHHHHHHTTCSEEEECCC--------CSHHHHHHHHHHHC
T ss_pred -------hhhcCHHHHHHHHHhhHhcCCCEEEeCCC--------CCHHHHHHHHHHcC
Confidence 11235889999999999999999999984 14677778887775
No 108
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.58 E-value=1.8 Score=38.97 Aligned_cols=76 Identities=14% Similarity=0.098 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. | ..|+ .|+
T Consensus 36 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi--aGv----------------------- 90 (307)
T 3s5o_A 36 KLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLL--AGS----------------------- 90 (307)
T ss_dssp HHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEE--EEC-----------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEE--Eec-----------------------
Confidence 57788888899999999776544 369999999999999884 1 1111 121
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+..+..+-|++++..-++|||.|++=.
T Consensus 91 ----g~~~t~~ai~la~~A~~~Gadavlv~~ 117 (307)
T 3s5o_A 91 ----GCESTQATVEMTVSMAQVGADAAMVVT 117 (307)
T ss_dssp ----CCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred ----CCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 112478889999999999999999843
No 109
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=88.57 E-value=0.87 Score=41.39 Aligned_cols=69 Identities=17% Similarity=0.140 Sum_probs=49.2
Q ss_pred HHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec------CCcccCChhHHHHHHHHHHHcCCcccceeee
Q 025344 79 AHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN------VGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 79 ~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEIS------dGti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
+.+||+..+.. .| .-++.++.++++|+++|-|. .|.-+ .+.-++++++|+++||+|+-.|+.
T Consensus 15 ~e~~g~~~~~~--------~G--~~~d~~~ilk~~G~N~VRi~~w~~P~~g~~~--~~~~~~~~~~A~~~GlkV~ld~Hy 82 (332)
T 1hjs_A 15 EERAGVSYKNT--------NG--NAQPLENILAANGVNTVRQRVWVNPADGNYN--LDYNIAIAKRAKAAGLGVYIDFHY 82 (332)
T ss_dssp HHHTTCCCBCT--------TS--CBCCHHHHHHHTTCCEEEEEECSSCTTCTTS--HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHcCCEEECC--------CC--CcccHHHHHHHCCCCEEEEeeeeCCCCCcCC--HHHHHHHHHHHHHCCCEEEEEecc
Confidence 56677766641 12 23456788899999999994 44333 466778999999999999999987
Q ss_pred ecCCCCC
Q 025344 153 MFNKSDI 159 (254)
Q Consensus 153 k~~~s~v 159 (254)
.+...++
T Consensus 83 sd~WadP 89 (332)
T 1hjs_A 83 SDTWADP 89 (332)
T ss_dssp SSSCCBT
T ss_pred CCCcCCc
Confidence 5444344
No 110
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=88.53 E-value=12 Score=34.11 Aligned_cols=168 Identities=14% Similarity=0.196 Sum_probs=104.4
Q ss_pred CCCCceeEecCCCCCCcchhHHHHHHHhhccccc----EEeecCcccccCChh-----HHHHHHHHHHhC--CceecC--
Q 025344 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVD----GLKFSGGSHSLMPKP-----FIEEVVKRAHQH--DVYVST-- 88 (254)
Q Consensus 22 R~~GlT~V~DkG~~~~~g~~~~~DlLe~ag~yID----~lKfg~GT~~l~~~~-----~l~eKi~l~~~~--gV~v~~-- 88 (254)
|..|++-++-+|. .+...+..++.+..|=+ .+-.+.|-+...-.+ .+.+..+++.++ .|..-.
T Consensus 62 ~~aGV~~ii~~g~----~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEi 137 (325)
T 3ipw_A 62 ERNGLSHIIITSG----CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNIDKVVAIGEI 137 (325)
T ss_dssp HHTTEEEEEECCC----SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEE
T ss_pred HHcCCcEEEEccC----CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCCCEEEEEee
Confidence 4569999999997 56789999999988865 777777766543221 567777777664 221111
Q ss_pred C-cHH-----HHHHHhCCchHHHHHHHHHH-cCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCC
Q 025344 89 G-DWA-----EHLIRNGPSAFKEYVEDCKQ-VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPS 161 (254)
Q Consensus 89 G-tl~-----E~a~~qg~~~~~~yl~~~k~-lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~ 161 (254)
| .+. -...++. .|.+.++.|++ ++...|==+-.. .+ ++++.+++.+.... -|+-...+ |
T Consensus 138 GLD~~~~~~~~~~~Q~~--~F~~ql~lA~e~~~lPviiH~r~A----~~---d~l~iL~~~~~~~~--~gViH~Fs--G- 203 (325)
T 3ipw_A 138 GLDYERLQFSDKETQLS--GYRTLSILHQKYPYLPFFFHCRKS----WS---DLCQLNKELGYNGC--KGVVHCFD--G- 203 (325)
T ss_dssp EEETTCCSSSCHHHHHH--HHHHTHHHHHHCTTCCEEEEEESC----HH---HHHHHHHHTTCTTS--CEEECSCC--C-
T ss_pred ecCCCcCCCCCHHHHHH--HHHHHHHHHHHhhCCeEEEEeCch----HH---HHHHHHHhcCCCCC--cEEEEECC--C-
Confidence 2 121 1233444 79999999999 999877444332 33 45555566543311 24432211 1
Q ss_pred ccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceEEecCCc
Q 025344 162 DRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (254)
Q Consensus 162 ~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~klifEAP~k 240 (254)
+ .+++++.|+.|.+ +=+=+- ++. +.+.+ +++..+|++||+.|...|
T Consensus 204 ---------------------s----~e~a~~~l~lG~y-is~~G~-~~k-----~~~~~-~~v~~iPldrlLlETDaP 249 (325)
T 3ipw_A 204 ---------------------T----EEEMNQILNEGWD-IGVTGN-SLQ-----SIELL-NVMKQIPIERLHIETDCP 249 (325)
T ss_dssp ---------------------C----HHHHHHHHHTTCE-EEECSG-GGS-----SHHHH-HHHTTSCGGGEEECCCTT
T ss_pred ---------------------C----HHHHHHHHhcCcE-EeeCcc-ccC-----cHHHH-HHHHhCCcccEEEeCCCc
Confidence 1 6778888999944 433332 232 23334 588999999999997655
No 111
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=88.50 E-value=2.7 Score=37.96 Aligned_cols=97 Identities=21% Similarity=0.211 Sum_probs=63.7
Q ss_pred HHHHHHHHcCCCEEEecCCcc-------------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 025344 105 EYVEDCKQVGFDTIELNVGSL-------------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti-------------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~ 171 (254)
+-.+.+-+.|..+|-|-|+.. -+|.++-.+-|+.+++.+-. +.|-++- ..|.. +
T Consensus 94 ~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~--~~~~i~a-------Rtda~----~ 160 (290)
T 2hjp_A 94 YVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARAD--RDFVVIA-------RVEAL----I 160 (290)
T ss_dssp HHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSS--TTSEEEE-------EECTT----T
T ss_pred HHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhccc--CCcEEEE-------eehHh----h
Confidence 334444458999999999873 36777777777777775322 3333320 11110 0
Q ss_pred ccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 172 ARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 172 ~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
. ....++.|++++...+||||.|.+|++ -...+++.+|.+.++
T Consensus 161 a--------~~g~~~ai~Ra~ay~eAGAd~i~~e~~-------~~~~~~~~~i~~~~~ 203 (290)
T 2hjp_A 161 A--------GLGQQEAVRRGQAYEEAGADAILIHSR-------QKTPDEILAFVKSWP 203 (290)
T ss_dssp T--------TCCHHHHHHHHHHHHHTTCSEEEECCC-------CSSSHHHHHHHHHCC
T ss_pred c--------cccHHHHHHHHHHHHHcCCcEEEeCCC-------CCCHHHHHHHHHHcC
Confidence 0 113789999999999999999999983 122467777887776
No 112
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=88.50 E-value=7.7 Score=31.70 Aligned_cols=102 Identities=16% Similarity=0.285 Sum_probs=66.9
Q ss_pred hhHHHHHHHhhccc----ccEEeecCcccccCChhHHHHHHHHHHhCCcee--cC-CcHHHHHHHhCCchHHHHHHHHHH
Q 025344 40 HNVLEDIFESMGQF----VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV--ST-GDWAEHLIRNGPSAFKEYVEDCKQ 112 (254)
Q Consensus 40 ~~~~~DlLe~ag~y----ID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v--~~-Gtl~E~a~~qg~~~~~~yl~~~k~ 112 (254)
+..+.+.++...++ +..+-|++|...+.+ +.|.+.++.++++|+.+ .+ |++++ . ++.++.+.+
T Consensus 52 ~~~i~~~i~~~~~~~~~~~~~i~~~GGEP~l~~-~~l~~l~~~~~~~~~~i~i~Tng~~~~-----~----~~~~~~l~~ 121 (245)
T 3c8f_A 52 VEDLMKEVVTYRHFMNASGGGVTASGGEAILQA-EFVRDWFRACKKEGIHTCLDTNGFVRR-----Y----DPVIDELLE 121 (245)
T ss_dssp HHHHHHHHGGGHHHHTSTTCEEEEEESCGGGGH-HHHHHHHHHHHTTTCCEEEEECCCCCC-----C----CHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhcCCCCeEEEECCCcCCCH-HHHHHHHHHHHHcCCcEEEEeCCCcCc-----C----HHHHHHHHH
Confidence 44566666655554 578899999988865 56899999999998844 34 64422 1 122333444
Q ss_pred cCCCEEEecCCccc---------CChhHHHHHHHHHHHcCCcccceeee
Q 025344 113 VGFDTIELNVGSLE---------IPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 113 lGF~~IEISdGti~---------i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
. ++.|-||=-+.+ .+.+...+.|+.+++.|+.+.-.+.+
T Consensus 122 ~-~~~v~isld~~~~~~~~~~~~~~~~~~~~~i~~l~~~g~~v~i~~~~ 169 (245)
T 3c8f_A 122 V-TDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKNVKVWIRYVV 169 (245)
T ss_dssp T-CSEEEEECCCSSHHHHHHHHSSCSHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred h-CCEEEEeCCCCCHHHhhhccCCCHHHHHHHHHHHHhcCCEEEEEEee
Confidence 5 678888754431 34467778999999999875544433
No 113
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=88.47 E-value=4.8 Score=40.74 Aligned_cols=147 Identities=12% Similarity=0.090 Sum_probs=100.6
Q ss_pred ccccEEeecCcccccCChhHHHHHHHHHHhCCceec-----CCcHHHHHHHh--CCchHHHHHHHHHHcCCCEEEecCCc
Q 025344 52 QFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS-----TGDWAEHLIRN--GPSAFKEYVEDCKQVGFDTIELNVGS 124 (254)
Q Consensus 52 ~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~-----~Gtl~E~a~~q--g~~~~~~yl~~~k~lGF~~IEISdGt 124 (254)
.=+|.+-+-..++ +-+.++.-++.++++|..+. +|.| |-.... +++.+-+..+.+.+.|.+.|=|-|-.
T Consensus 209 ~Gvd~irIf~s~n---~l~~l~~~i~~ak~~G~~v~~~i~~~~d~-~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~ 284 (718)
T 3bg3_A 209 NGMDVFRVFDSLN---YLPNMLLGMEAAGSAGGVVEAAISYTGDV-ADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMA 284 (718)
T ss_dssp HTCCEEEEECSSC---CHHHHHHHHHHHHTTTSEEEEEEECCSCT-TCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTT
T ss_pred cCcCEEEEEecHH---HHHHHHHHHHHHHHcCCeEEEEEEeeccc-cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcC
Confidence 3478887776444 44579999999999997642 2333 322211 22345566667778999999999999
Q ss_pred ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 125 LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 125 i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
--+.+.+-.++|+.++++ +. ...+++-+ +. |...-+-.....++|||+.|=.
T Consensus 285 G~~~P~~v~~lV~~lk~~-~p-~~~I~~H~-Hn-------------------------d~GlAvANslaAveAGa~~VD~ 336 (718)
T 3bg3_A 285 GLLKPTACTMLVSSLRDR-FP-DLPLHIHT-HD-------------------------TSGAGVAAMLACAQAGADVVDV 336 (718)
T ss_dssp SCCCHHHHHHHHHHHHHH-ST-TCCEEEEC-CC-------------------------TTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCcCHHHHHHHHHHHHHh-CC-CCeEEEEE-CC-------------------------CccHHHHHHHHHHHhCCCEEEe
Confidence 888899988999999884 10 12344411 11 2333477888889999996533
Q ss_pred ecccccccCCCccHHHHHHHHhccCC
Q 025344 205 DSDDVCKHADSLRADIIAKVIGRLGL 230 (254)
Q Consensus 205 Eargi~d~~g~~r~d~i~~ii~~l~~ 230 (254)
=-.|+=...||...+.+-..+...+.
T Consensus 337 ti~GlGertGN~~lE~vv~~L~~~g~ 362 (718)
T 3bg3_A 337 AADSMSGMTSQPSMGALVACTRGTPL 362 (718)
T ss_dssp BCGGGCSTTSCCBHHHHHHHHTTSTT
T ss_pred cCcccccccCchhHHHHHHHHHhcCC
Confidence 33488888999998888777766654
No 114
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=88.38 E-value=1.8 Score=38.48 Aligned_cols=108 Identities=11% Similarity=0.057 Sum_probs=71.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.-=.|+ .|+ | .
T Consensus 21 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gVi--aGv-------g--~--------------- 74 (288)
T 2nuw_A 21 ALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLI--FQV-------G--S--------------- 74 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEE--EEC-------C--C---------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeE--Eee-------C--C---------------
Confidence 57788888899999999886543 47999999999999987411111 122 1 1
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEecccccc-cCCCccHHHHHHHHhccCCCceEEecC
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCK-HADSLRADIIAKVIGRLGLEKTMFEAT 238 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d-~~g~~r~d~i~~ii~~l~~~klifEAP 238 (254)
.+..+.|++++..-++|||-|++=.--.+. ..-+---+-..+|++..++-=++.--|
T Consensus 75 ---~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P 132 (288)
T 2nuw_A 75 ---LNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYP 132 (288)
T ss_dssp ---SCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred ---CCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 147888999999999999999987653332 111111222345666666655666555
No 115
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=88.32 E-value=2 Score=37.12 Aligned_cols=95 Identities=11% Similarity=0.073 Sum_probs=65.6
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHh-CCceecCCc-HHHHHHHhCCchHHHHHHHHHHcCCC
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ-HDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFD 116 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~-~gV~v~~Gt-l~E~a~~qg~~~~~~yl~~~k~lGF~ 116 (254)
.+.....+++..++|+|++|+|.+-..-+..+.+++ +++ +|..+..-- +.. -|+.++.|.+.+.++|.|
T Consensus 23 ~~~~a~~~v~~~~~~v~~~Kvg~~lf~~~G~~~v~~----l~~~~g~~v~lD~Kl~D-----ipnTv~~~~~~~~~~gad 93 (228)
T 3m47_A 23 NRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAE----FRKRFGCRIIADFKVAD-----IPETNEKICRATFKAGAD 93 (228)
T ss_dssp SHHHHHHHHHTTTTTCSEEEEEHHHHHHHCTHHHHH----HHHHHCCEEEEEEEECS-----CHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHcCCcccEEEEcHHHHHhcCHHHHHH----HHhcCCCeEEEEEeecc-----cHhHHHHHHHHHHhCCCC
Confidence 668889999999999999999887665555555544 333 454444321 221 133578889999999999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHcCCc
Q 025344 117 TIELNVGSLEIPEETLLRYVRLVKSAGLK 145 (254)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~G~~ 145 (254)
.|-|.- ....+....+++.+++.|-+
T Consensus 94 ~vtvh~---~~G~~~l~~~~~~~~~~g~~ 119 (228)
T 3m47_A 94 AIIVHG---FPGADSVRACLNVAEEMGRE 119 (228)
T ss_dssp EEEEES---TTCHHHHHHHHHHHHHHTCE
T ss_pred EEEEec---cCCHHHHHHHHHHHHhcCCC
Confidence 999964 23356666788888776643
No 116
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=88.23 E-value=0.42 Score=43.74 Aligned_cols=121 Identities=19% Similarity=0.289 Sum_probs=70.9
Q ss_pred HHHHHHHHHHhC-------CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----C--ChhHHHHHHH
Q 025344 71 FIEEVVKRAHQH-------DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----I--PEETLLRYVR 137 (254)
Q Consensus 71 ~l~eKi~l~~~~-------gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~----i--~~~~r~~lI~ 137 (254)
.+.|.|+-.++. +|++++..|.+--+. .+...++.+.+.+.|.++|+||+|... + +......+++
T Consensus 204 ~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~--~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ 281 (349)
T 3hgj_A 204 FPLQVAQAVREVVPRELPLFVRVSATDWGEGGWS--LEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFAD 281 (349)
T ss_dssp HHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCC--HHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEEeccccccCCCCC--HHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHH
Confidence 456667666653 345666433321000 012445666777889999999987542 1 2223456677
Q ss_pred HHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcC-CcEEEEecccccccCCCc
Q 025344 138 LVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSL 216 (254)
Q Consensus 138 ~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAG-A~~ViiEargi~d~~g~~ 216 (254)
.+++. +++. .--.| .+. | .+.+++.|++| ||.|++ +|.+..
T Consensus 282 ~ir~~-------~~iP--Vi~~G--------gi~-----------t----~e~a~~~l~~G~aD~V~i-GR~~la----- 323 (349)
T 3hgj_A 282 AVRKR-------VGLR--TGAVG--------LIT-----------T----PEQAETLLQAGSADLVLL-GRVLLR----- 323 (349)
T ss_dssp HHHHH-------HCCE--EEECS--------SCC-----------C----HHHHHHHHHTTSCSEEEE-STHHHH-----
T ss_pred HHHHH-------cCce--EEEEC--------CCC-----------C----HHHHHHHHHCCCceEEEe-cHHHHh-----
Confidence 77663 2221 10011 111 2 46677889999 999998 676653
Q ss_pred cHHHHHHHHhccCCC
Q 025344 217 RADIIAKVIGRLGLE 231 (254)
Q Consensus 217 r~d~i~~ii~~l~~~ 231 (254)
++|++.++.+.++.+
T Consensus 324 nPdl~~k~~~~l~~~ 338 (349)
T 3hgj_A 324 DPYFPLRAAKALGVA 338 (349)
T ss_dssp CTTHHHHHHHHTTCC
T ss_pred CchHHHHHHHHCCCC
Confidence 257889999888843
No 117
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=88.20 E-value=3 Score=37.06 Aligned_cols=119 Identities=11% Similarity=0.068 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ .|+ |
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi--~Gv-------g--------------- 78 (291)
T 3a5f_A 23 KLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVI--AGT-------G--------------- 78 (291)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEE--EEC-------C---------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE--EeC-------C---------------
Confidence 6778888888999999987654 3489999999999998873 2 1111 222 1
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEecc--------c-----------------cccc----CCCccHHHHHHHHh
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD--------D-----------------VCKH----ADSLRADIIAKVIG 226 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar--------g-----------------i~d~----~g~~r~d~i~~ii~ 226 (254)
..+..+.|++++..-++|||-|++=.- | +|+. .-++..+.+.++++
T Consensus 79 -----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (291)
T 3a5f_A 79 -----SNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCE 153 (291)
T ss_dssp -----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTT
T ss_pred -----cccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 114788899999999999999998652 1 2542 23567788888863
Q ss_pred ccCCCceEE--ec-CCchhHHHHHHHhCC
Q 025344 227 RLGLEKTMF--EA-TNPRTSEWFIRRYGP 252 (254)
Q Consensus 227 ~l~~~klif--EA-P~k~qQ~~~I~~~Gp 252 (254)
. .+|+- |+ .+-.+...+++..++
T Consensus 154 -~--pnivgiK~s~gd~~~~~~~~~~~~~ 179 (291)
T 3a5f_A 154 -D--KNIVAVXEASGNISQIAQIKALCGD 179 (291)
T ss_dssp -S--TTEEEEEECSCCHHHHHHHHHHHGG
T ss_pred -C--CCEEEEeCCCCCHHHHHHHHHhcCC
Confidence 3 44432 44 455555666665543
No 118
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=88.16 E-value=1.5 Score=39.28 Aligned_cols=91 Identities=18% Similarity=0.306 Sum_probs=62.3
Q ss_pred cCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHH
Q 025344 113 VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAE 192 (254)
Q Consensus 113 lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~ 192 (254)
-|.++|-|-+| ++....|+.+.+.|..|.-.+|..-.. + ..++.+.. ........+++|+.++
T Consensus 106 aGa~aVklEgg------~e~~~~I~al~~agipV~gHiGLtPq~--v-----~~~ggf~v----~grt~~~a~~~i~rA~ 168 (264)
T 1m3u_A 106 AGANMVKIEGG------EWLVETVQMLTERAVPVCGHLGLTPQS--V-----NIFGGYKV----QGRGDEAGDQLLSDAL 168 (264)
T ss_dssp TTCSEEECCCS------GGGHHHHHHHHHTTCCEEEEEESCGGG--H-----HHHTSSCC----CCCSHHHHHHHHHHHH
T ss_pred cCCCEEEECCc------HHHHHHHHHHHHCCCCeEeeecCCcee--e-----cccCCeEE----EeCCHHHHHHHHHHHH
Confidence 89999999999 366788999999998888888874210 0 00011110 0000113589999999
Q ss_pred HHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 193 RCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 193 ~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
...+|||+.|.+|+- ..++.++|.++++
T Consensus 169 a~~eAGA~~ivlE~v---------p~~~a~~it~~l~ 196 (264)
T 1m3u_A 169 ALEAAGAQLLVLECV---------PVELAKRITEALA 196 (264)
T ss_dssp HHHHHTCCEEEEESC---------CHHHHHHHHHHCS
T ss_pred HHHHCCCcEEEEecC---------CHHHHHHHHHhCC
Confidence 999999999999982 2355666666665
No 119
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=88.11 E-value=2.2 Score=37.93 Aligned_cols=76 Identities=11% Similarity=0.140 Sum_probs=57.8
Q ss_pred hHHHHHHHHHH-cCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccC
Q 025344 102 AFKEYVEDCKQ-VGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (254)
Q Consensus 102 ~~~~yl~~~k~-lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~ 174 (254)
.+.++++++-+ -|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ .|+ |
T Consensus 25 ~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi--aGv-------g-------------- 81 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALI--AQV-------G-------------- 81 (293)
T ss_dssp HHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEE--EEC-------C--------------
T ss_pred HHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEE--Eec-------C--------------
Confidence 57788888888 99999988654 3479999999999999873 1 1111 222 1
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 175 ~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
..+..+.|++++..-++|||.|++=.
T Consensus 82 ------~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 82 ------SVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp ------CSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 11478889999999999999999865
No 120
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=88.07 E-value=2.4 Score=38.02 Aligned_cols=76 Identities=14% Similarity=0.093 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ +|+ |
T Consensus 33 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi--aGv-------g--------------- 88 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLI--AHV-------G--------------- 88 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEE--EEC-------C---------------
T ss_pred HHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEE--Eec-------C---------------
Confidence 5788899999999999988643 3489999999999999873 1 1111 122 1
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
..+..+.|++++..-++|||.|++=.
T Consensus 89 -----~~~t~~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 89 -----CVSTAESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp -----CSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred -----CCCHHHHHHHHHHHHhCCCCEEEecC
Confidence 11478889999999999999999866
No 121
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=88.06 E-value=4.8 Score=35.88 Aligned_cols=76 Identities=13% Similarity=0.070 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. | ..|+. |+
T Consensus 29 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia--Gv----------------------- 83 (297)
T 3flu_A 29 QLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA--GT----------------------- 83 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE--EC-----------------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE--eC-----------------------
Confidence 57788888889999999875444 378999999999998873 1 11111 22
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+..+..+-|++++..-++|||-|++=.
T Consensus 84 ----g~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 84 ----GANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp ----CCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred ----CCcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 112488889999999999999999876
No 122
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=88.00 E-value=1.4 Score=39.48 Aligned_cols=79 Identities=13% Similarity=0.146 Sum_probs=54.7
Q ss_pred hhHHHHHHHhhcccccEEee------------cCcccccCChhHHHHHHHHHHhC-CceecC---CcHHHHHHHhCCchH
Q 025344 40 HNVLEDIFESMGQFVDGLKF------------SGGSHSLMPKPFIEEVVKRAHQH-DVYVST---GDWAEHLIRNGPSAF 103 (254)
Q Consensus 40 ~~~~~DlLe~ag~yID~lKf------------g~GT~~l~~~~~l~eKi~l~~~~-gV~v~~---Gtl~E~a~~qg~~~~ 103 (254)
+..+.+....+-++.|.+-+ ++|++.+-..+.+.+.++-.++. +++|.- .||-+ .+.+
T Consensus 70 ~~~~~~aa~~a~~~~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~------~~~~ 143 (318)
T 1vhn_A 70 PNELSEAARILSEKYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEK------NEVE 143 (318)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSS------CCHH
T ss_pred HHHHHHHHHHHHHhCCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCCh------HHHH
Confidence 45666666666666888766 45677777788899999988774 544432 13311 1233
Q ss_pred HHHHHHHHHcCCCEEEecCCcc
Q 025344 104 KEYVEDCKQVGFDTIELNVGSL 125 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti 125 (254)
++.+.+.+.|.++|.|+.++-
T Consensus 144 -~~a~~l~~~G~d~i~v~g~~~ 164 (318)
T 1vhn_A 144 -EIYRILVEEGVDEVFIHTRTV 164 (318)
T ss_dssp -HHHHHHHHTTCCEEEEESSCT
T ss_pred -HHHHHHHHhCCCEEEEcCCCc
Confidence 888999999999999998764
No 123
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=87.99 E-value=5.8 Score=35.22 Aligned_cols=121 Identities=17% Similarity=0.150 Sum_probs=81.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ .|+ |
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi--aGv-------g--------------- 77 (294)
T 2ehh_A 22 ALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVI--AGT-------G--------------- 77 (294)
T ss_dssp HHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEE--EEC-------C---------------
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE--Eec-------C---------------
Confidence 5788888888999999987544 3489999999999998873 2 1111 222 1
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEecc-------------------------ccccc---CC-CccHHHHHHHHh
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLRADIIAKVIG 226 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar-------------------------gi~d~---~g-~~r~d~i~~ii~ 226 (254)
..+..+.|++++..-++|||-|++=.- -+|+. .| ++..+.+.++++
T Consensus 78 -----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (294)
T 2ehh_A 78 -----GNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLAS 152 (294)
T ss_dssp -----CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHh
Confidence 114788899999999999999998652 13552 23 567777777773
Q ss_pred ccCCCceEE--ec-CCchhHHHHHHHhCCC
Q 025344 227 RLGLEKTMF--EA-TNPRTSEWFIRRYGPK 253 (254)
Q Consensus 227 ~l~~~klif--EA-P~k~qQ~~~I~~~Gp~ 253 (254)
+. .+|+- |+ ++-.+...+++..+++
T Consensus 153 ~~--pnivgiKds~gd~~~~~~~~~~~~~~ 180 (294)
T 2ehh_A 153 EC--ENIVASKESTPNMDRISEIVKRLGES 180 (294)
T ss_dssp HC--TTEEEEEECCSCHHHHHHHHHHHCTT
T ss_pred hC--CCEEEEEeCCCCHHHHHHHHHhcCCC
Confidence 33 34432 44 3455555666665543
No 124
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=87.96 E-value=3.6 Score=36.61 Aligned_cols=108 Identities=15% Similarity=0.058 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.-=.|+ .|+ | .
T Consensus 21 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gvi--aGv-------g--~--------------- 74 (293)
T 1w3i_A 21 KLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKII--FQV-------G--G--------------- 74 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEE--EEC-------C--C---------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEE--Eec-------C--C---------------
Confidence 57788888899999999886543 57999999999999998411111 122 1 1
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEecccccc-cCCCccHHHHHHHHhccCCCceEEecC
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCK-HADSLRADIIAKVIGRLGLEKTMFEAT 238 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d-~~g~~r~d~i~~ii~~l~~~klifEAP 238 (254)
.+..+.|++++..-++|||.|++=.--.+. ..-+---+-..+|++..++-=++.--|
T Consensus 75 ---~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P 132 (293)
T 1w3i_A 75 ---LNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYP 132 (293)
T ss_dssp ---SCHHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred ---CCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECc
Confidence 147888999999999999999997653333 211111222345666666666666655
No 125
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=87.96 E-value=7.7 Score=36.98 Aligned_cols=25 Identities=12% Similarity=0.105 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLE 126 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~ 126 (254)
.+.+..+.|.+.|.|+|-+++++..
T Consensus 312 d~~~iA~~~~~aGaDgI~v~ntt~~ 336 (443)
T 1tv5_A 312 QKKEIADVLLETNIDGMIISNTTTQ 336 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBSC
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4677888899999999999999873
No 126
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=87.96 E-value=5.1 Score=36.45 Aligned_cols=83 Identities=22% Similarity=0.225 Sum_probs=49.6
Q ss_pred HHHHHHHHHHcCCCEEEecCCc--c------c----------CChhHHH----HHHHHHHHcCCcccce--eeeecCCCC
Q 025344 103 FKEYVEDCKQVGFDTIELNVGS--L------E----------IPEETLL----RYVRLVKSAGLKAKPK--FAVMFNKSD 158 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGt--i------~----------i~~~~r~----~lI~~~~~~G~~v~~E--~g~k~~~s~ 158 (254)
|-+--+.|++.|||.|||.-+. + + -+.+.|. ++|+.+++. +-++ +++|
T Consensus 154 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~a---vG~d~pV~vR----- 225 (349)
T 3hgj_A 154 FVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREV---VPRELPLFVR----- 225 (349)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH---SCTTSCEEEE-----
T ss_pred HHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHH---hcCCceEEEE-----
Confidence 3333455678899999997654 1 1 1234554 455555552 1111 3444
Q ss_pred CCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 159 IPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 159 v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
++|..|.. +-.++++.++.++..-++|+++|-+=.
T Consensus 226 ------------ls~~~~~~-~g~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 226 ------------VSATDWGE-GGWSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp ------------EESCCCST-TSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ------------eccccccC-CCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 33333321 222678889999999999999998753
No 127
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=87.93 E-value=2.1 Score=38.70 Aligned_cols=76 Identities=16% Similarity=0.118 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. | ..|+ +|+
T Consensus 46 ~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVi--aGv----------------------- 100 (315)
T 3na8_A 46 ALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTI--VSV----------------------- 100 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBE--EEC-----------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE--Eec-----------------------
Confidence 57888888889999999776543 479999999999999883 1 1111 122
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+..+..+.|++++..-++|||-|++=.
T Consensus 101 ----g~~~t~~ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 101 ----SDLTTAKTVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp ----CCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred ----CCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 112478889999999999999999965
No 128
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=87.86 E-value=1 Score=39.00 Aligned_cols=47 Identities=21% Similarity=0.314 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cC--ChhHHHHHHHHHHHcCCcccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL-EI--PEETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~i--~~~~r~~lI~~~~~~G~~v~~ 148 (254)
.+++.++.++++||++||+..... .+ +..+..++-+.+++.|+++.+
T Consensus 37 ~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 86 (296)
T 2g0w_A 37 SFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTE 86 (296)
T ss_dssp CHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEe
Confidence 688888888888888888874321 11 223455677778888888665
No 129
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=87.57 E-value=5 Score=36.56 Aligned_cols=83 Identities=20% Similarity=0.251 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCCEEEecCCc-------c-----------cCChhHHH----HHHHHHHHcCCcccceeeeecCCCCCC
Q 025344 103 FKEYVEDCKQVGFDTIELNVGS-------L-----------EIPEETLL----RYVRLVKSAGLKAKPKFAVMFNKSDIP 160 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGt-------i-----------~i~~~~r~----~lI~~~~~~G~~v~~E~g~k~~~s~v~ 160 (254)
|-+--+.+++.|||.|||.-+. + -=+.+.|. ++|+.+++. +-.-+++|...
T Consensus 146 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~---v~~pv~vRls~---- 218 (340)
T 3gr7_A 146 FQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREV---WDGPLFVRISA---- 218 (340)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH---CCSCEEEEEES----
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHh---cCCceEEEecc----
Confidence 3333455678899999998652 0 11334554 555666653 11125665332
Q ss_pred CccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 161 SDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 161 ~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
..|.. +-.+.++.++.++..-++|+++|-+=.
T Consensus 219 -------------~~~~~-~g~~~~~~~~la~~L~~~Gvd~i~vs~ 250 (340)
T 3gr7_A 219 -------------SDYHP-DGLTAKDYVPYAKRMKEQGVDLVDVSS 250 (340)
T ss_dssp -------------CCCST-TSCCGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred -------------ccccC-CCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 22211 112467778888888999999998843
No 130
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=87.54 E-value=0.69 Score=40.33 Aligned_cols=47 Identities=21% Similarity=0.315 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCC--cccC-----ChhHHHHHHHHHHHcCCcccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG--SLEI-----PEETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG--ti~i-----~~~~r~~lI~~~~~~G~~v~~ 148 (254)
.+++.++.++++||+.||+... .+++ +.+...++.+.+++.|+++.+
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 69 (340)
T 2zds_A 16 PLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWA 69 (340)
T ss_dssp CHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEE
Confidence 7899999999999999999863 3332 345577888999999999854
No 131
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=87.46 E-value=3.4 Score=36.69 Aligned_cols=76 Identities=14% Similarity=0.105 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ .|+ |
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi--aGv-------g--------------- 77 (289)
T 2yxg_A 22 GLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVI--AGA-------G--------------- 77 (289)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEE--EEC-------C---------------
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE--EeC-------C---------------
Confidence 5788888888999999988543 3479999999999998873 2 1111 222 1
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
..+..+.|++++..-++|||-|++=.
T Consensus 78 -----~~~t~~ai~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 78 -----SNCTEEAIELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp -----CSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 11478889999999999999999866
No 132
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=87.45 E-value=10 Score=35.14 Aligned_cols=142 Identities=8% Similarity=0.110 Sum_probs=92.0
Q ss_pred HHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 025344 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (254)
Q Consensus 43 ~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISd 122 (254)
+-+.|..+| ||.+=.||+.+ .|. ..+-++.+++.+..+..-+| .+. ..+. ++.+.+.|.+.|-|..
T Consensus 30 ia~~L~~~G--v~~IE~g~p~~--~~~--~~~~~~~i~~~~~~~~v~~~-----~r~--~~~d-i~~a~~~g~~~v~i~~ 95 (382)
T 2ztj_A 30 IAKALDEFG--IEYIEVTTPVA--SPQ--SRKDAEVLASLGLKAKVVTH-----IQC--RLDA-AKVAVETGVQGIDLLF 95 (382)
T ss_dssp HHHHHHHHT--CSEEEECCTTS--CHH--HHHHHHHHHTSCCSSEEEEE-----EES--CHHH-HHHHHHTTCSEEEEEE
T ss_pred HHHHHHHcC--cCEEEEcCCcC--CHH--HHHHHHHHHhcCCCcEEEEE-----ccc--Chhh-HHHHHHcCCCEEEEEe
Confidence 345555666 88888888653 233 56777777777654221223 122 2333 6778888999999876
Q ss_pred Cccc-------CCh----hHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHH
Q 025344 123 GSLE-------IPE----ETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRA 191 (254)
Q Consensus 123 Gti~-------i~~----~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~ 191 (254)
.+-+ .+. +.-.+.|+.+++.|-....++...+.. ..|++.+++.+
T Consensus 96 ~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~------------------------~~~~~~~~~~~ 151 (382)
T 2ztj_A 96 GTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTF------------------------RSEEQDLLAVY 151 (382)
T ss_dssp CC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTT------------------------TSCHHHHHHHH
T ss_pred ccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCC------------------------CCCHHHHHHHH
Confidence 5533 232 445688999999993333345542110 12589999999
Q ss_pred HHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 192 ERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 192 ~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
+...++ |+.| .|+|..|-..+..+.++++.+
T Consensus 152 ~~~~~~-a~~i-----~l~DT~G~~~P~~~~~lv~~l 182 (382)
T 2ztj_A 152 EAVAPY-VDRV-----GLADTVGVATPRQVYALVREV 182 (382)
T ss_dssp HHHGGG-CSEE-----EEEETTSCCCHHHHHHHHHHH
T ss_pred HHHHHh-cCEE-----EecCCCCCCCHHHHHHHHHHH
Confidence 999999 9866 368888888888887777543
No 133
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=87.38 E-value=3 Score=37.22 Aligned_cols=76 Identities=22% Similarity=0.165 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ .|+
T Consensus 22 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi--aGv----------------------- 76 (297)
T 2rfg_A 22 ALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVI--AGA----------------------- 76 (297)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBE--EEC-----------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEE--Ecc-----------------------
Confidence 5788889989999999987543 3489999999999998873 1 1111 222
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+..+..+.|++++..-++|||-|++=.
T Consensus 77 ----g~~~t~~ai~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 77 ----GSNNPVEAVRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp ----CCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred ----CCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 112478889999999999999999865
No 134
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=87.36 E-value=5.5 Score=35.61 Aligned_cols=76 Identities=17% Similarity=0.148 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ .|+ |
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi--aGv-------g--------------- 89 (301)
T 1xky_A 34 KTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVI--AGT-------G--------------- 89 (301)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE--EEC-------C---------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEE--eCC-------C---------------
Confidence 5788899999999999988544 3489999999999999873 1 1111 222 1
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
..+..+.|++++..-++|||.|++=.
T Consensus 90 -----~~~t~~ai~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 90 -----SNNTHASIDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp -----CSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 12478889999999999999999865
No 135
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=87.29 E-value=6.7 Score=33.30 Aligned_cols=106 Identities=14% Similarity=0.177 Sum_probs=69.1
Q ss_pred HHHHHHHhhccc-ccEEeecCcccccCChhHHHHHHHHHHhCCceecC---C--cHH----HHHHHhCCchHHHHHHHHH
Q 025344 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST---G--DWA----EHLIRNGPSAFKEYVEDCK 111 (254)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~---G--tl~----E~a~~qg~~~~~~yl~~~k 111 (254)
.+++.|+.+.+. .|.+=+.... ....+++.-++++++|+.+.. + +++ +....+..+.+++.++.|+
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~ 114 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGG----LAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAG 114 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTT----CGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCCc----hHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 466777766665 7777777653 134589999999999997752 2 121 1111111126889999999
Q ss_pred HcCCCEEEecCCcccC------Ch-------hHHHHHHHHHHHcCCcccceee
Q 025344 112 QVGFDTIELNVGSLEI------PE-------ETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 112 ~lGF~~IEISdGti~i------~~-------~~r~~lI~~~~~~G~~v~~E~g 151 (254)
.+|.+.|=+..|+... .. +...++.+.+++.|+++.-|-.
T Consensus 115 ~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 167 (287)
T 3kws_A 115 ELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPL 167 (287)
T ss_dssp HTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCC
T ss_pred HcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 9999999997765432 22 3344556677888888766644
No 136
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=87.04 E-value=2.1 Score=37.77 Aligned_cols=79 Identities=15% Similarity=0.066 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHcCCC-EEEecCCcc------cC--ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccc
Q 025344 102 AFKEYVEDCKQVGFD-TIELNVGSL------EI--PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVA 172 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~-~IEISdGti------~i--~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~ 172 (254)
.+.+..+.+.+.||| +|||+-++= .+ +.+...++|+.+++.= -+| +.+|-.
T Consensus 107 ~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~--~~P-v~vKi~----------------- 166 (311)
T 1jub_A 107 ENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF--TKP-LGVKLP----------------- 166 (311)
T ss_dssp HHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC--CSC-EEEEEC-----------------
T ss_pred HHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc--CCC-EEEEEC-----------------
Confidence 455566667788999 999975421 12 5666778888888741 112 444421
Q ss_pred cCCCccccccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 173 RAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 173 ~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
|. | |.+++.+.++...++||+.|++-.+
T Consensus 167 ~~-~------~~~~~~~~a~~~~~~G~d~i~v~~~ 194 (311)
T 1jub_A 167 PY-F------DLVHFDIMAEILNQFPLTYVNSVNS 194 (311)
T ss_dssp CC-C------SHHHHHHHHHHHTTSCCCEEEECCC
T ss_pred CC-C------CHHHHHHHHHHHHHcCCcEEEecCC
Confidence 11 1 4667788899999999999998665
No 137
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=86.92 E-value=4.4 Score=37.08 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. | ..|+ +|+ |
T Consensus 53 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVi--aGv-------g--------------- 108 (343)
T 2v9d_A 53 GTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVL--IGT-------G--------------- 108 (343)
T ss_dssp HHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE--EEC-------C---------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEE--Eec-------C---------------
Confidence 57788888889999999886543 579999999999998873 1 1111 222 1
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
..+..+.|++++..-++|||.|++=.
T Consensus 109 -----~~st~eai~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 109 -----GTNARETIELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp -----SSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 12478889999999999999999865
No 138
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=86.89 E-value=3 Score=35.99 Aligned_cols=120 Identities=17% Similarity=0.178 Sum_probs=74.3
Q ss_pred hHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (254)
...+.+++.- +|++=+ +++.+.+++.+++-++.+|++|+.+.... ... +..+.+.++|+|.|=+
T Consensus 92 ~~i~~~~~aG---ad~I~l--~~~~~~~p~~l~~~i~~~~~~g~~v~~~v----------~t~-eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 92 QDVDALAQAG---ADIIAF--DASFRSRPVDIDSLLTRIRLHGLLAMADC----------STV-NEGISCHQKGIEFIGT 155 (229)
T ss_dssp HHHHHHHHHT---CSEEEE--ECCSSCCSSCHHHHHHHHHHTTCEEEEEC----------SSH-HHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHcC---CCEEEE--CccccCChHHHHHHHHHHHHCCCEEEEec----------CCH-HHHHHHHhCCCCEEEe
Confidence 3455555544 444433 33344444679999999999999877641 012 2234567899999954
Q ss_pred cC-Cccc---CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHH
Q 025344 121 NV-GSLE---IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLE 196 (254)
Q Consensus 121 Sd-Gti~---i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLe 196 (254)
+. |... ....+ .++++++++.+..|+.|-|+. + .+.+++.++
T Consensus 156 ~~~g~t~~~~~~~~~-~~li~~l~~~~ipvIA~GGI~-----------------------------t----~~d~~~~~~ 201 (229)
T 3q58_A 156 TLSGYTGPITPVEPD-LAMVTQLSHAGCRVIAEGRYN-----------------------------T----PALAANAIE 201 (229)
T ss_dssp TTTTSSSSCCCSSCC-HHHHHHHHTTTCCEEEESSCC-----------------------------S----HHHHHHHHH
T ss_pred cCccCCCCCcCCCCC-HHHHHHHHHcCCCEEEECCCC-----------------------------C----HHHHHHHHH
Confidence 32 2211 11122 367777776677777777772 1 455667789
Q ss_pred cCCcEEEEecccccc
Q 025344 197 AGADMIMIDSDDVCK 211 (254)
Q Consensus 197 AGA~~ViiEargi~d 211 (254)
+||+-|+| +..+++
T Consensus 202 ~GadgV~V-Gsai~~ 215 (229)
T 3q58_A 202 HGAWAVTV-GSAITR 215 (229)
T ss_dssp TTCSEEEE-CHHHHC
T ss_pred cCCCEEEE-chHhcC
Confidence 99999999 555654
No 139
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=86.84 E-value=4.6 Score=36.18 Aligned_cols=76 Identities=11% Similarity=0.157 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ .|+
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVi--aGv----------------------- 88 (306)
T 1o5k_A 34 SYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVI--VGA----------------------- 88 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEE--EEC-----------------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEE--EcC-----------------------
Confidence 5888899999999999988654 3489999999999999873 1 1111 222
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+..+..+.|++++..-++|||.|++=.
T Consensus 89 ----g~~st~~ai~la~~A~~~Gadavlv~~ 115 (306)
T 1o5k_A 89 ----GTNSTEKTLKLVKQAEKLGANGVLVVT 115 (306)
T ss_dssp ----CCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred ----CCccHHHHHHHHHHHHhcCCCEEEECC
Confidence 112478889999999999999999865
No 140
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=86.68 E-value=4.4 Score=35.95 Aligned_cols=121 Identities=16% Similarity=0.091 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ .|+ |
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi--aGv-------g--------------- 77 (292)
T 2vc6_A 22 ALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVI--AGA-------G--------------- 77 (292)
T ss_dssp HHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBE--EEC-------C---------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE--Eec-------C---------------
Confidence 5788899999999999987543 3489999999999999873 1 1121 222 1
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEecc--------c-----------------cccc---CC-CccHHHHHHHHh
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD--------D-----------------VCKH---AD-SLRADIIAKVIG 226 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar--------g-----------------i~d~---~g-~~r~d~i~~ii~ 226 (254)
..+..+.|++++..-++|||-|++=.- | +|+. .| ++..+.+.+|++
T Consensus 78 -----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 78 -----SNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp -----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred -----CccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 114788899999999999999999662 1 2442 23 566777777764
Q ss_pred ccCCCceEE--ec-CCchhHHHHHHHhCCC
Q 025344 227 RLGLEKTMF--EA-TNPRTSEWFIRRYGPK 253 (254)
Q Consensus 227 ~l~~~klif--EA-P~k~qQ~~~I~~~Gp~ 253 (254)
+.+ +|+- |+ ++-.+...+++..+++
T Consensus 153 ~~p--nIvgiK~s~gd~~~~~~~~~~~~~~ 180 (292)
T 2vc6_A 153 DCP--NVKGVXDATGNLLRPSLERMACGED 180 (292)
T ss_dssp HCT--TEEEEEECSCCTHHHHHHHHHSCTT
T ss_pred hCC--CEEEEecCCCCHHHHHHHHHHcCCC
Confidence 332 3322 34 3455555666655543
No 141
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=86.68 E-value=3 Score=37.06 Aligned_cols=76 Identities=12% Similarity=0.061 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ .|+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi--aGv----------------------- 77 (292)
T 2ojp_A 23 SLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVI--AGT----------------------- 77 (292)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE--EEC-----------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEE--Eec-----------------------
Confidence 5778888888899999988654 3489999999999999873 1 1111 222
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+..+..+.|++++..-++|||-|++=.
T Consensus 78 ----g~~~t~~ai~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 78 ----GANATAEAISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp ----CCSSHHHHHHHHHHTTTSSCSEEEEEC
T ss_pred ----CCccHHHHHHHHHHHHhcCCCEEEECC
Confidence 112478889999999999999999865
No 142
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=86.67 E-value=3.7 Score=36.79 Aligned_cols=76 Identities=21% Similarity=0.204 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ .|+ |
T Consensus 38 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi--aGv-------g--------------- 93 (304)
T 3cpr_A 38 AGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLI--AGV-------G--------------- 93 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEE--EEC-------C---------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE--ecC-------C---------------
Confidence 5788888888999999877543 3489999999999998873 1 1121 222 1
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
..+..+.|++++..-++|||-|++=.
T Consensus 94 -----~~st~~ai~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 94 -----TNNTRTSVELAEAAASAGADGLLVVT 119 (304)
T ss_dssp -----CSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 11478889999999999999999866
No 143
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=86.65 E-value=2.2 Score=37.92 Aligned_cols=112 Identities=13% Similarity=0.222 Sum_probs=61.0
Q ss_pred ChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHcCC
Q 025344 68 PKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSAGL 144 (254)
Q Consensus 68 ~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~G~ 144 (254)
+.+.+++.++.+|++|+.+.. |+ + ..++ ++.+.++|.+.|=|++- +...+.+.-.++.+.+. .+.
T Consensus 147 ~~~~l~~l~~~a~~lGl~~lv----ev---~---t~ee-~~~A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~-~~~ 214 (272)
T 3qja_A 147 EQSVLVSMLDRTESLGMTALV----EV---H---TEQE-ADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLP-SSV 214 (272)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE----EE---S---SHHH-HHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHGGGSC-TTS
T ss_pred CHHHHHHHHHHHHHCCCcEEE----Ec---C---CHHH-HHHHHHCCCCEEEECCCcccccccCHHHHHHHHHhCc-ccC
Confidence 344577777777777775422 11 1 3333 34455678888877753 23333333333322211 145
Q ss_pred cccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHH
Q 025344 145 KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKV 224 (254)
Q Consensus 145 ~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~i 224 (254)
.+..|.|++ + .+.+++.+++||+-|+| ++.|+.... -...+.++
T Consensus 215 pvVaegGI~-----------------------------t----~edv~~l~~~GadgvlV-Gsal~~a~d--p~~~~~~l 258 (272)
T 3qja_A 215 IRIAESGVR-----------------------------G----TADLLAYAGAGADAVLV-GEGLVTSGD--PRAAVADL 258 (272)
T ss_dssp EEEEESCCC-----------------------------S----HHHHHHHHHTTCSEEEE-CHHHHTCSC--HHHHHHHH
T ss_pred EEEEECCCC-----------------------------C----HHHHHHHHHcCCCEEEE-cHHHhCCCC--HHHHHHHH
Confidence 666666662 2 34556678999999998 344665542 13345555
Q ss_pred Hhc
Q 025344 225 IGR 227 (254)
Q Consensus 225 i~~ 227 (254)
++.
T Consensus 259 ~~~ 261 (272)
T 3qja_A 259 VTA 261 (272)
T ss_dssp HTT
T ss_pred Hhh
Confidence 543
No 144
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=86.57 E-value=1.2 Score=39.18 Aligned_cols=99 Identities=17% Similarity=0.260 Sum_probs=60.3
Q ss_pred cccccCChhHHHHHHHHHHhCCc-eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH
Q 025344 62 GSHSLMPKPFIEEVVKRAHQHDV-YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK 140 (254)
Q Consensus 62 GT~~l~~~~~l~eKi~l~~~~gV-~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~ 140 (254)
||-.+|=++...+.++..++++| .|.-+.= ++...+..+.|-+-|+++|||.-- ...-.+.|+.++
T Consensus 14 ~~~~~~~~~~m~~~~~~l~~~~vv~Vir~~~--------~~~a~~~a~al~~gGi~~iEvt~~-----t~~a~e~I~~l~ 80 (232)
T 4e38_A 14 GTENLYFQSMMSTINNQLKALKVIPVIAIDN--------AEDIIPLGKVLAENGLPAAEITFR-----SDAAVEAIRLLR 80 (232)
T ss_dssp ------CCCCHHHHHHHHHHHCEEEEECCSS--------GGGHHHHHHHHHHTTCCEEEEETT-----STTHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHhCCEEEEEEcCC--------HHHHHHHHHHHHHCCCCEEEEeCC-----CCCHHHHHHHHH
Confidence 55556656656777788888898 5554521 224556667788889999999433 334568888887
Q ss_pred HcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEe
Q 025344 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 141 ~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiE 205 (254)
+. .++.-+ |. +..++ .++++..++|||++|+.=
T Consensus 81 ~~----~~~~~i-------Ga------GTVlt---------------~~~a~~Ai~AGA~fIvsP 113 (232)
T 4e38_A 81 QA----QPEMLI-------GA------GTILN---------------GEQALAAKEAGATFVVSP 113 (232)
T ss_dssp HH----CTTCEE-------EE------ECCCS---------------HHHHHHHHHHTCSEEECS
T ss_pred Hh----CCCCEE-------eE------CCcCC---------------HHHHHHHHHcCCCEEEeC
Confidence 73 122222 11 11122 788999999999999853
No 145
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=86.53 E-value=4.4 Score=35.79 Aligned_cols=95 Identities=13% Similarity=0.106 Sum_probs=62.3
Q ss_pred HcCCCEEEecCCc-----ccCChhHHHHHHHHHHHc----CCc--ccceeeeecCCCCCCCccccccccccccCCCcccc
Q 025344 112 QVGFDTIELNVGS-----LEIPEETLLRYVRLVKSA----GLK--AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (254)
Q Consensus 112 ~lGF~~IEISdGt-----i~i~~~~r~~lI~~~~~~----G~~--v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~ 180 (254)
+.|..+|-|=||. --+|.++.++-|+.+++. |.- |.--.... . -| +.|+
T Consensus 104 ~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~--~--~g-~~~~--------------- 163 (255)
T 2qiw_A 104 EAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAV--K--LG-ADVF--------------- 163 (255)
T ss_dssp HTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHH--H--HC-TTTS---------------
T ss_pred HcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechh--h--cc-CCcc---------------
Confidence 4899999999986 235667777888877776 532 22111110 0 00 0000
Q ss_pred ccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC-CCceE
Q 025344 181 VEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG-LEKTM 234 (254)
Q Consensus 181 ~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~-~~kli 234 (254)
....++.|++++...+|||+.|.+|+- ...+++.+|.++++ +-+++
T Consensus 164 ~~~~~~ai~ra~a~~eAGAd~i~~e~~--------~~~~~~~~i~~~~~~P~n~~ 210 (255)
T 2qiw_A 164 EDPMVEAIKRIKLMEQAGARSVYPVGL--------STAEQVERLVDAVSVPVNIT 210 (255)
T ss_dssp SSHHHHHHHHHHHHHHHTCSEEEECCC--------CSHHHHHHHHTTCSSCBEEE
T ss_pred hHHHHHHHHHHHHHHHcCCcEEEEcCC--------CCHHHHHHHHHhCCCCEEEE
Confidence 113789999999999999999999973 23578888888876 43444
No 146
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=86.45 E-value=2.9 Score=34.76 Aligned_cols=91 Identities=16% Similarity=0.200 Sum_probs=56.4
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
.++++.+.+.|.+.|.+......=|.+...++++.+++. |+.+. +. + .
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~----~~-----~-----------~---------- 127 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIM----AD-----I-----------A---------- 127 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEE----EE-----C-----------S----------
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEE----ec-----C-----------C----------
Confidence 456778889999999987654332224556888888887 66543 21 1 0
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEecccccccC-----CCccHHHHHHHHhccC
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCKHA-----DSLRADIIAKVIGRLG 229 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~-----g~~r~d~i~~ii~~l~ 229 (254)
+++ .+++..++||++|++-..|..+.. ....-+.+.++.+.++
T Consensus 128 -t~~----e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ 175 (223)
T 1y0e_A 128 -TVE----EAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVD 175 (223)
T ss_dssp -SHH----HHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCC
T ss_pred -CHH----HHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCC
Confidence 233 345578999999998665543322 1223456777776553
No 147
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=86.35 E-value=10 Score=33.62 Aligned_cols=170 Identities=17% Similarity=0.153 Sum_probs=100.5
Q ss_pred CCCCceeEecCCCCCCcchhHHHHHHHhhccccc---EEeecCcccccCC----hhHHHHHHHHHHhCCceecC--C-cH
Q 025344 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVD---GLKFSGGSHSLMP----KPFIEEVVKRAHQHDVYVST--G-DW 91 (254)
Q Consensus 22 R~~GlT~V~DkG~~~~~g~~~~~DlLe~ag~yID---~lKfg~GT~~l~~----~~~l~eKi~l~~~~gV~v~~--G-tl 91 (254)
+..|++-++-+|. .+...+..++.+..|=+ .+..+.|-+.... ++.+.+..+++.+..|.--. | .+
T Consensus 27 ~~~gV~~~v~~g~----~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vvaIGEiGLD~ 102 (287)
T 3rcm_A 27 LEAGVTQMLLTGT----SLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAVGECGLDF 102 (287)
T ss_dssp HHTTEEEEEECCC----SHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEEEEEEEEET
T ss_pred HHcCCeEEEEecC----CHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEEEEEeeeCC
Confidence 4569999999997 56788888888888865 4777777665432 23466655666554432211 2 12
Q ss_pred H----HHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccc
Q 025344 92 A----EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF 167 (254)
Q Consensus 92 ~----E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~ 167 (254)
. ....++. .|.+-++.|+++|...+==+-. ..+ ++++.+++.+... .-++-...+ |
T Consensus 103 ~~~~~~~~~Q~~--~F~~ql~lA~e~~lPv~iH~r~----a~~---~~l~il~~~~~~~--~~~V~H~fs--G------- 162 (287)
T 3rcm_A 103 NRDFSPRPLQEK--ALEAQLTLAAQLRLPVFLHERD----ASE---RLLAILKDYRDHL--TGAVVHCFT--G------- 162 (287)
T ss_dssp TTCSSCHHHHHH--HHHHHHHHHHHHTCCEEEEEES----CHH---HHHHHHHTTGGGC--SCEEECSCC--C-------
T ss_pred CcccCcHHHHHH--HHHHHHHHHHHhCCCEEEEcCC----cHH---HHHHHHHHcCCCC--CeEEEEeCC--C-------
Confidence 1 1123343 7999999999999887633332 233 4455555543211 113321110 1
Q ss_pred ccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccc-cccCCCccHHHHHHHHhccCCCceEEecCCc
Q 025344 168 GAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDV-CKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (254)
Q Consensus 168 ~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi-~d~~g~~r~d~i~~ii~~l~~~klifEAP~k 240 (254)
+ .+++++.|+.|.+.=+- |. +.. -|...+.++++.+|++||++|...|
T Consensus 163 ---------------~----~e~a~~~l~~G~yis~~---g~i~~~---k~~~~l~~~v~~ip~drlLlETD~P 211 (287)
T 3rcm_A 163 ---------------E----REALFAYLDLDLHIGIT---GWICDE---RRGTHLHPLVGNIPEGRLMLESDAP 211 (287)
T ss_dssp ---------------C----HHHHHHHHHTTCEEEEC---GGGGCT---TTCGGGHHHHTTSCTTSEEECCCTT
T ss_pred ---------------C----HHHHHHHHHCCcEEEEC---chhccc---cCHHHHHHHHHhcCCccEEEeccCC
Confidence 1 56777888899654432 42 210 1223467888999999999998654
No 148
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=86.25 E-value=2.6 Score=36.70 Aligned_cols=135 Identities=12% Similarity=0.130 Sum_probs=73.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc--CCh----hHHHHHHHHHHHcCCcccceeee--ecCCCCCCCcccccccccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLE--IPE----ETLLRYVRLVKSAGLKAKPKFAV--MFNKSDIPSDRDRAFGAYVAR 173 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~--i~~----~~r~~lI~~~~~~G~~v~~E~g~--k~~~s~v~~~~d~~~~~~~~~ 173 (254)
..+..++.++++||++||+...... .|. ++..++-+.+++.|+++.+=... ......+.+ .|++
T Consensus 36 ~~~~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~~~~~~~~~~~l~~-~d~~------- 107 (316)
T 3qxb_A 36 PDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYTYNHFLA-PTLE------- 107 (316)
T ss_dssp HHHHHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHTSCBTTC-SSHH-------
T ss_pred HHHHHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEEeeccccccccccCCC-CCHH-------
Confidence 4566678889999999999876543 122 25667788889999997542111 000001111 1111
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCcEEEEeccc----ccccCCCccH-------HH---HHHHHhccCCCceEEec--
Q 025344 174 APRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD----VCKHADSLRA-------DI---IAKVIGRLGLEKTMFEA-- 237 (254)
Q Consensus 174 ~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEarg----i~d~~g~~r~-------d~---i~~ii~~l~~~klifEA-- 237 (254)
......+.+.+.++..-+.||..|++-.-+ .+.. ..-+. +- +.+.++..|+..|.+|.
T Consensus 108 -----~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~lE~~~ 181 (316)
T 3qxb_A 108 -----LQSLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALN-PARREEIYAIARDMWIELAAYAKRQGLSMLYVEPVP 181 (316)
T ss_dssp -----HHHHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred -----HHHHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCC-cccHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEecC
Confidence 001124556666777777899999865432 1111 00111 11 22233445664488997
Q ss_pred C------CchhHHHHHHHh
Q 025344 238 T------NPRTSEWFIRRY 250 (254)
Q Consensus 238 P------~k~qQ~~~I~~~ 250 (254)
. ...+-..+++.+
T Consensus 182 ~~~~~~~t~~~~~~l~~~v 200 (316)
T 3qxb_A 182 LATEFPSSAADAARLMADL 200 (316)
T ss_dssp CTTBSSCSHHHHHHHHHHH
T ss_pred CccccCCCHHHHHHHHHHH
Confidence 2 234456688877
No 149
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=86.18 E-value=0.76 Score=39.31 Aligned_cols=109 Identities=11% Similarity=0.112 Sum_probs=69.7
Q ss_pred HHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCC-c------HHHH-------------HHHhCCc
Q 025344 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-D------WAEH-------------LIRNGPS 101 (254)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~G-t------l~E~-------------a~~qg~~ 101 (254)
..=+.+..+| .|.+=+.+.....++.+.+++..++++++|+.+..- + +... ...+..+
T Consensus 25 ~~l~~~~~~G--~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~ 102 (290)
T 3tva_A 25 VHLEVAQDLK--VPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVA 102 (290)
T ss_dssp BCHHHHHHTT--CSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHH
T ss_pred HHHHHHHHcC--CCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHH
Confidence 3344444455 677777664433455667999999999999976542 1 1110 0001112
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCC-hh-------HHHHHHHHHHHcCCcccceeee
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIP-EE-------TLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~-~~-------~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
.+++.++.|++||.+.|=+..|...-. .+ ...++.+.+++.|.++.-|-..
T Consensus 103 ~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~ 161 (290)
T 3tva_A 103 EMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ 161 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCC
Confidence 689999999999999999987865322 22 2345566778889887777654
No 150
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=86.17 E-value=2.9 Score=39.74 Aligned_cols=139 Identities=12% Similarity=0.205 Sum_probs=87.2
Q ss_pred HHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCc--eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 025344 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV--YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (254)
Q Consensus 43 ~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV--~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (254)
+-+.|..+| ||.+=.||..+. |. -.+-++...+.+. .++ +| ... ..+. ++.+.+.|.+.|-|
T Consensus 66 Ia~~L~~~G--v~~IEvG~P~as--p~--d~~~~~~i~~~~~~~~v~--~~-----~r~--~~~d-i~~A~~aG~~~V~i 129 (423)
T 3ivs_A 66 IAKALDNFG--VDYIELTSPVAS--EQ--SRQDCEAICKLGLKCKIL--TH-----IRC--HMDD-ARVAVETGVDGVDV 129 (423)
T ss_dssp HHHHHHHHT--CSEEEECCTTSC--HH--HHHHHHHHHTSCCSSEEE--EE-----EES--CHHH-HHHHHHTTCSEEEE
T ss_pred HHHHHHHcC--CCEEEEeecccC--HH--HHHHHHHHHhcCCCCEEE--Ee-----ecc--Chhh-HHHHHHcCCCEEEE
Confidence 345566666 788888885432 22 2333444444443 222 11 121 3333 57777889999998
Q ss_pred cCCcc--------cCC----hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHH
Q 025344 121 NVGSL--------EIP----EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLI 188 (254)
Q Consensus 121 SdGti--------~i~----~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i 188 (254)
...+- ..+ .+.-.+.|+.+++.|+.| +|...+.. ..|++.++
T Consensus 130 ~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V--~~~~eda~------------------------r~d~~~~~ 183 (423)
T 3ivs_A 130 VIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEV--RFSSEDSF------------------------RSDLVDLL 183 (423)
T ss_dssp EEEC-------------CHHHHHHHHHHHHHHTTTCEE--EEEEESGG------------------------GSCHHHHH
T ss_pred EeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEE--EEEEccCc------------------------CCCHHHHH
Confidence 64432 222 344456899999999876 44442110 12588899
Q ss_pred HHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 189 RRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 189 ~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
+.++...++||+.| .|+|..|-..+..+.++++.+
T Consensus 184 ~v~~~~~~~Ga~~i-----~l~DTvG~~~P~~v~~lv~~l 218 (423)
T 3ivs_A 184 SLYKAVDKIGVNRV-----GIADTVGCATPRQVYDLIRTL 218 (423)
T ss_dssp HHHHHHHHHCCSEE-----EEEETTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcc-----ccCCccCcCCHHHHHHHHHHH
Confidence 99999999999865 478888998888888877554
No 151
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=86.16 E-value=2 Score=39.14 Aligned_cols=142 Identities=13% Similarity=0.110 Sum_probs=87.4
Q ss_pred HHHhhcccccEEeecCcccccCChhHHHHHHHHHHh----CCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 025344 46 IFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ----HDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (254)
Q Consensus 46 lLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~----~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (254)
.|..+| ||.+=.||+.+.-.+.+.+++..+.... -++.+. ++..+ . + .++.+.+.|.+.|-|.
T Consensus 50 ~L~~~G--v~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~-------~l~~~--~-~-~i~~a~~~g~~~v~i~ 116 (337)
T 3ble_A 50 LLQKLN--VDRVEIASARVSKGELETVQKIMEWAATEQLTERIEIL-------GFVDG--N-K-TVDWIKDSGAKVLNLL 116 (337)
T ss_dssp HHHTTC--CSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEE-------EESST--T-H-HHHHHHHHTCCEEEEE
T ss_pred HHHHcC--CCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEE-------EEccc--h-h-hHHHHHHCCCCEEEEE
Confidence 444445 7888888876533333556655543221 122221 22222 1 1 6788888999999986
Q ss_pred CCcccC------------ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHH
Q 025344 122 VGSLEI------------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (254)
Q Consensus 122 dGti~i------------~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~ 189 (254)
..+-++ ..+.-.+.|+.+++.|++|. +...+ . ...+..+++.+++
T Consensus 117 ~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~--~~~~~----~-----------------~~~~~~~~~~~~~ 173 (337)
T 3ble_A 117 TKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKIN--VYLED----W-----------------SNGFRNSPDYVKS 173 (337)
T ss_dssp EECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEE--EEEET----H-----------------HHHHHHCHHHHHH
T ss_pred EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE--EEEEE----C-----------------CCCCcCCHHHHHH
Confidence 543222 12455678899999998753 44421 0 0011225899999
Q ss_pred HHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 190 RAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 190 ~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
.+++..++||+.|. |+|..|-..+..+.++++.+
T Consensus 174 ~~~~~~~~Ga~~i~-----l~DT~G~~~P~~v~~lv~~l 207 (337)
T 3ble_A 174 LVEHLSKEHIERIF-----LPDTLGVLSPEETFQGVDSL 207 (337)
T ss_dssp HHHHHHTSCCSEEE-----EECTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEE-----EecCCCCcCHHHHHHHHHHH
Confidence 99999999998764 57788888888777776543
No 152
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=85.95 E-value=4.5 Score=33.99 Aligned_cols=93 Identities=6% Similarity=-0.028 Sum_probs=56.2
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhC--CceecC-CcHHHHHHHhCCchHHHHHHHHHHcCC
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGF 115 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~--gV~v~~-Gtl~E~a~~qg~~~~~~yl~~~k~lGF 115 (254)
.+...-++++..+.++|++|+|+=-..-...+.++ ..|++ +.++.. .-+.+ .-..|++.+.+.|.
T Consensus 17 ~~~~~~~~~~~~~~~vd~ie~g~~~~~~~G~~~i~----~lr~~~~~~~i~ld~~l~d--------~p~~~~~~~~~aGa 84 (218)
T 3jr2_A 17 NLTDAVAVASNVASYVDVIEVGTILAFAEGMKAVS----TLRHNHPNHILVCDMKTTD--------GGAILSRMAFEAGA 84 (218)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECHHHHHHHTTHHHH----HHHHHCTTSEEEEEEEECS--------CHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhcCCceEEEeCcHHHHhcCHHHHH----HHHHhCCCCcEEEEEeecc--------cHHHHHHHHHhcCC
Confidence 56777788888888999999995221112223333 33333 444432 11211 12337788899999
Q ss_pred CEEEecCCcccCChhHHHHHHHHHHHcCCcc
Q 025344 116 DTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (254)
Q Consensus 116 ~~IEISdGti~i~~~~r~~lI~~~~~~G~~v 146 (254)
+.|-+-+-.. .+.-.++++.++++|.++
T Consensus 85 d~i~vh~~~~---~~~~~~~~~~~~~~g~~~ 112 (218)
T 3jr2_A 85 DWITVSAAAH---IATIAACKKVADELNGEI 112 (218)
T ss_dssp SEEEEETTSC---HHHHHHHHHHHHHHTCEE
T ss_pred CEEEEecCCC---HHHHHHHHHHHHHhCCcc
Confidence 9998876542 344567888888876543
No 153
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=85.94 E-value=3 Score=37.66 Aligned_cols=137 Identities=18% Similarity=0.103 Sum_probs=87.6
Q ss_pred CCceecCCcHH--HHHHHhCCchHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-Ccccceeeee
Q 025344 82 HDVYVSTGDWA--EHLIRNGPSAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVM 153 (254)
Q Consensus 82 ~gV~v~~Gtl~--E~a~~qg~~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k 153 (254)
.||.+.+=|.| +- -.=+.+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ .|+
T Consensus 13 ~Gv~~a~vTPF~~~d-g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVi--aGv- 88 (314)
T 3d0c_A 13 STISGINIVPFLEGT-REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVV--AGI- 88 (314)
T ss_dssp SSEEECCCCCBCTTT-CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEE--EEE-
T ss_pred CceEEeeeccccCCC-CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEE--ecC-
Confidence 46655555544 21 0111225888899999999999977543 3489999999999998873 1 1111 122
Q ss_pred cCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecc-------------------------c
Q 025344 154 FNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------D 208 (254)
Q Consensus 154 ~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar-------------------------g 208 (254)
+. +..+.|++++..-++|||.|++=.- -
T Consensus 89 --------------------------g~-st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 141 (314)
T 3d0c_A 89 --------------------------GY-SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSI 141 (314)
T ss_dssp --------------------------CS-SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEE
T ss_pred --------------------------Cc-CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 12 4778899999999999999998652 2
Q ss_pred ccccCCCccHHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCC
Q 025344 209 VCKHADSLRADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGP 252 (254)
Q Consensus 209 i~d~~g~~r~d~i~~ii~~l~~~klif--EA-P~k~qQ~~~I~~~Gp 252 (254)
+|+..|.+..+.+.+|++ . .+|+- |+ .+-.+...+++..++
T Consensus 142 lYn~tg~l~~~~~~~La~-~--pnIvgiKdssgd~~~~~~~~~~~~~ 185 (314)
T 3d0c_A 142 IYFKDAHLSDDVIKELAP-L--DKLVGIKYAINDIQRVTQVMRAVPK 185 (314)
T ss_dssp EEECCTTSCTHHHHHHTT-C--TTEEEEEECCCCHHHHHHHHHHSCG
T ss_pred EEeCCCCcCHHHHHHHHc-C--CCEEEEEeCCCCHHHHHHHHHhcCC
Confidence 366555566677777752 3 44432 44 345555566665544
No 154
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=85.87 E-value=14 Score=33.98 Aligned_cols=128 Identities=15% Similarity=0.236 Sum_probs=81.4
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHH----HHHHHHHHHcCCcccceeeeecCCCCCCCcccc-ccccccccCCCccc
Q 025344 105 EYVEDCKQVGFDTIELNVGSLEIPEETL----LRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR-AFGAYVARAPRSTE 179 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~~~~r----~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~-~~~~~~~~~~~~~~ 179 (254)
+.+..|-+.||+.|=|.-... |.++= .++++.+...|.-|--|+|.=-+ .+|. .-...+|
T Consensus 89 e~i~~ai~~GFtSVMiDgS~~--p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg------~Ed~v~~~~~yT------- 153 (323)
T 2isw_A 89 ESVKMAIDLGFSSVMIDASHH--PFDENVRITKEVVAYAHARSVSVEAELGTLGG------IEEDVQNTVQLT------- 153 (323)
T ss_dssp HHHHHHHHTTCSEEEECCTTS--CHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------------CCCC-------
T ss_pred HHHHHHHHcCCCeEEecCCCC--CHHHHHHHHHHHHHHHHHcCCeEEEEeCCccC------CccCcccccccC-------
Confidence 457778889999998866544 44432 36788899999999999998321 1211 0011233
Q ss_pred cccCHHHHHHHHHHHHHcCCcEEEEec---ccccc--cCCC--ccHHHHHHHHhccCCCceEEecC-CchhHHHHHHHhC
Q 025344 180 YVEDVDLLIRRAERCLEAGADMIMIDS---DDVCK--HADS--LRADIIAKVIGRLGLEKTMFEAT-NPRTSEWFIRRYG 251 (254)
Q Consensus 180 ~~~d~~~~i~~~~~dLeAGA~~ViiEa---rgi~d--~~g~--~r~d~i~~ii~~l~~~klifEAP-~k~qQ~~~I~~~G 251 (254)
||++..+.+++ -|.|.+=+== -|.|. .+-. ++.|.+++|-+.++.-=++==+. -|+.-+..|+.||
T Consensus 154 ---dPeea~~Fv~~---TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~~g 227 (323)
T 2isw_A 154 ---EPQDAKKFVEL---TGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYG 227 (323)
T ss_dssp ---CHHHHHHHHHH---HCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTT
T ss_pred ---CHHHHHHHHHH---HCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHHHhc
Confidence 67777766664 6888665532 28998 4434 88999999988886443333333 4666677788887
Q ss_pred CC
Q 025344 252 PK 253 (254)
Q Consensus 252 p~ 253 (254)
-+
T Consensus 228 g~ 229 (323)
T 2isw_A 228 GK 229 (323)
T ss_dssp CC
T ss_pred cc
Confidence 65
No 155
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=85.84 E-value=3.2 Score=37.84 Aligned_cols=76 Identities=16% Similarity=0.194 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ +|+
T Consensus 56 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVi--aGv----------------------- 110 (332)
T 2r8w_A 56 AFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLM--AGI----------------------- 110 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEE--EEE-----------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE--Eec-----------------------
Confidence 5778888888899999987654 3489999999999998873 1 1111 122
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+..+..+.|++++..-++|||-|++=.
T Consensus 111 ----g~~st~eai~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 111 ----GALRTDEAVALAKDAEAAGADALLLAP 137 (332)
T ss_dssp ----CCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred ----CCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 112478889999999999999999865
No 156
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=85.73 E-value=3.9 Score=36.63 Aligned_cols=122 Identities=13% Similarity=0.118 Sum_probs=77.9
Q ss_pred HhCCchHHHHHHHHHHcCCCEEEecCCcccCC-------------hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcc
Q 025344 97 RNGPSAFKEYVEDCKQVGFDTIELNVGSLEIP-------------EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDR 163 (254)
Q Consensus 97 ~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~-------------~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~ 163 (254)
.+|-..+.+-++++.+.||+.+|||..++.+- .++..++-+.++++|+.+...-.. .-.+++ .
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~~~~~~~~~~~~~~~~~gi~i~~H~py---~iNL~S-~ 132 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAYEEELARLGALARAFGQRLSMHPGQ---YVNPGS-P 132 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHHHHHHHHHHHHHHHHHTTCEEEECCCT---TCCTTC-S
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCCCCHHHHHHHHHHHHHcCCeEEEeCch---hhcCCC-C
Confidence 44334788899999999999999988876653 256667778889999876442221 112222 1
Q ss_pred ccccccccccCCCccccccCHHHHHHHHHHHHHcCCc--EEEEecccccccCCCccHHHHHHHHhccCC-----CceEEe
Q 025344 164 DRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD--MIMIDSDDVCKHADSLRADIIAKVIGRLGL-----EKTMFE 236 (254)
Q Consensus 164 d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~--~ViiEargi~d~~g~~r~d~i~~ii~~l~~-----~klifE 236 (254)
|++ -...+++.+.+.++++-+.|+. .|++=.-+.|. . +++.++.+++.+.. ++|..|
T Consensus 133 ~~e------------~re~Si~~l~~~l~~a~~lG~~~a~~v~HpG~~~~---~-~e~~~~r~~e~l~~~~~a~~~l~lE 196 (301)
T 2j6v_A 133 DPE------------VVERSLAELRYSARLLSLLGAEDGVLVLHLGGAYG---E-KGKALRRFVENLRGEEEVLRYLALE 196 (301)
T ss_dssp CHH------------HHHHHHHHHHHHHHHHHHTTCTTCEEEEECCCCTT---C-HHHHHHHHHHHHTTCHHHHHHEEEE
T ss_pred CHH------------HHHHHHHHHHHHHHHHHHcCCCCCEEEECCCcCCC---C-HHHHHHHHHHHHhHHHhhcceEEEE
Confidence 111 0123578888999999899943 67666655443 2 56667766655541 256666
Q ss_pred cC
Q 025344 237 AT 238 (254)
Q Consensus 237 AP 238 (254)
.-
T Consensus 197 n~ 198 (301)
T 2j6v_A 197 ND 198 (301)
T ss_dssp CC
T ss_pred eC
Confidence 54
No 157
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=85.62 E-value=2.6 Score=36.33 Aligned_cols=144 Identities=13% Similarity=0.093 Sum_probs=84.8
Q ss_pred hhHHHHHHHhhcccccEEeecCcccccCCh---hHHHHHHHHHHhCCceecCC----cHHHHHHHh--CCchHHHHHHHH
Q 025344 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPK---PFIEEVVKRAHQHDVYVSTG----DWAEHLIRN--GPSAFKEYVEDC 110 (254)
Q Consensus 40 ~~~~~DlLe~ag~yID~lKfg~GT~~l~~~---~~l~eKi~l~~~~gV~v~~G----tl~E~a~~q--g~~~~~~yl~~~ 110 (254)
...++..++.-.+.||+. +-.|+. ..+ +.+++-++++|++|+++... |. + +.. .++.+.+..+.+
T Consensus 102 ~~~v~~a~~~Ga~~v~~~-l~~~~~--~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~-~--l~~~~~~~~~~~~a~~a 175 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIH-VNVGSD--EDWEAYRDLGMIAETCEYWGMPLIAMMYPRGK-H--IQNERDPELVAHAARLG 175 (273)
T ss_dssp CSCHHHHHHTTCSEEEEE-EEETST--THHHHHHHHHHHHHHHHHHTCCEEEEEEECST-T--CSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEE-EecCCC--CHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCc-c--cCCCCCHhHHHHHHHHH
Confidence 457788888777777552 222322 111 24778889999999866542 11 0 001 112345555888
Q ss_pred HHcCCCEEEecCCcccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHH
Q 025344 111 KQVGFDTIELNVGSLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (254)
Q Consensus 111 k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~ 189 (254)
.+.|.|+|=+|.. .+ .++++.+++. ...++..=|+. ..+.++..+
T Consensus 176 ~~~Gad~i~~~~~---~~----~~~l~~i~~~~~ipvva~GGi~---------------------------~~~~~~~~~ 221 (273)
T 2qjg_A 176 AELGADIVKTSYT---GD----IDSFRDVVKGCPAPVVVAGGPK---------------------------TNTDEEFLQ 221 (273)
T ss_dssp HHTTCSEEEECCC---SS----HHHHHHHHHHCSSCEEEECCSC---------------------------CSSHHHHHH
T ss_pred HHcCCCEEEECCC---CC----HHHHHHHHHhCCCCEEEEeCCC---------------------------CCCHHHHHH
Confidence 9999999999852 22 2444444432 22222222221 013778888
Q ss_pred HHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHh
Q 025344 190 RAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 226 (254)
Q Consensus 190 ~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~ 226 (254)
.++..+++||+.|++ ++.++.+.. + ...+.++.+
T Consensus 222 ~~~~~~~~Ga~gv~v-g~~i~~~~~-~-~~~~~~l~~ 255 (273)
T 2qjg_A 222 MIKDAMEAGAAGVAV-GRNIFQHDD-V-VGITRAVCK 255 (273)
T ss_dssp HHHHHHHHTCSEEEC-CHHHHTSSS-H-HHHHHHHHH
T ss_pred HHHHHHHcCCcEEEe-eHHhhCCCC-H-HHHHHHHHH
Confidence 899999999999999 888887642 2 334444443
No 158
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=85.55 E-value=0.74 Score=40.46 Aligned_cols=98 Identities=12% Similarity=0.184 Sum_probs=59.0
Q ss_pred HHHHHHHHHhCCceecCC--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhH--HHHHHHHHHHc--CCc
Q 025344 72 IEEVVKRAHQHDVYVSTG--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEET--LLRYVRLVKSA--GLK 145 (254)
Q Consensus 72 l~eKi~l~~~~gV~v~~G--tl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~--r~~lI~~~~~~--G~~ 145 (254)
-.+-++.++++|+.+.|| |.-|+.- +.++|+|+|-+ .|.+. =..+|+.++.- ...
T Consensus 116 ~~~vi~~~~~~gi~~ipGv~TptEi~~-------------A~~~Gad~vK~------FPa~~~gG~~~lkal~~p~p~ip 176 (232)
T 4e38_A 116 NPNTVRACQEIGIDIVPGVNNPSTVEA-------------ALEMGLTTLKF------FPAEASGGISMVKSLVGPYGDIR 176 (232)
T ss_dssp CHHHHHHHHHHTCEEECEECSHHHHHH-------------HHHTTCCEEEE------CSTTTTTHHHHHHHHHTTCTTCE
T ss_pred CHHHHHHHHHcCCCEEcCCCCHHHHHH-------------HHHcCCCEEEE------CcCccccCHHHHHHHHHHhcCCC
Confidence 345566777777777776 4555442 35789999977 22222 14677777662 233
Q ss_pred ccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEeccccccc----CCCccHHHH
Q 025344 146 AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKH----ADSLRADII 221 (254)
Q Consensus 146 v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~----~g~~r~d~i 221 (254)
+.|.=|+ + .+.+...|++||..+.+ +.-++.. +|+| +.|
T Consensus 177 ~~ptGGI------------------------------~----~~n~~~~l~aGa~~~vg-Gs~l~~~~~i~~~~~--~~i 219 (232)
T 4e38_A 177 LMPTGGI------------------------------T----PSNIDNYLAIPQVLACG-GTWMVDKKLVTNGEW--DEI 219 (232)
T ss_dssp EEEBSSC------------------------------C----TTTHHHHHTSTTBCCEE-ECGGGCHHHHHTTCH--HHH
T ss_pred eeeEcCC------------------------------C----HHHHHHHHHCCCeEEEE-CchhcChHHhhcCCH--HHH
Confidence 3333333 1 34577789999999888 6666654 4653 444
Q ss_pred HHHH
Q 025344 222 AKVI 225 (254)
Q Consensus 222 ~~ii 225 (254)
.+.+
T Consensus 220 ~~~a 223 (232)
T 4e38_A 220 ARLT 223 (232)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 159
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=85.48 E-value=3.9 Score=36.10 Aligned_cols=62 Identities=3% Similarity=-0.043 Sum_probs=40.2
Q ss_pred EEeecCccccc-------CChhHHHHHHHHHHhC-CceecC---CcHHHHHHHhCCchHHHHHHHHHHcC-CCEEEecCC
Q 025344 56 GLKFSGGSHSL-------MPKPFIEEVVKRAHQH-DVYVST---GDWAEHLIRNGPSAFKEYVEDCKQVG-FDTIELNVG 123 (254)
Q Consensus 56 ~lKfg~GT~~l-------~~~~~l~eKi~l~~~~-gV~v~~---Gtl~E~a~~qg~~~~~~yl~~~k~lG-F~~IEISdG 123 (254)
++=+.++|-.. .+.+.+.+.++-.++. ++++.- .+| ....+.++.+.+.+.| .+.|-+++.
T Consensus 125 ~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~-------~~~~~~~~a~~~~~aG~~d~i~v~~~ 197 (314)
T 2e6f_A 125 LLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPYF-------DIAHFDTAAAVLNEFPLVKFVTCVNS 197 (314)
T ss_dssp EEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCCC-------CHHHHHHHHHHHHTCTTEEEEEECCC
T ss_pred eEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCC-------CHHHHHHHHHHHHhcCCceEEEEeCC
Confidence 66666653322 2445577777777765 554432 122 1125777888999999 999999997
Q ss_pred c
Q 025344 124 S 124 (254)
Q Consensus 124 t 124 (254)
+
T Consensus 198 ~ 198 (314)
T 2e6f_A 198 V 198 (314)
T ss_dssp E
T ss_pred C
Confidence 7
No 160
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=85.27 E-value=2.3 Score=38.41 Aligned_cols=117 Identities=18% Similarity=0.131 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. | ..|+ +|+
T Consensus 34 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpVi--aGv----------------------- 88 (316)
T 3e96_A 34 HYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVV--AGI----------------------- 88 (316)
T ss_dssp HHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEE--EEE-----------------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEE--EEe-----------------------
Confidence 68888999999999999776543 589999999999998873 1 1111 122
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEecc-------------------------cccccCCCccHHHHHHHHhccCC
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKHADSLRADIIAKVIGRLGL 230 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar-------------------------gi~d~~g~~r~d~i~~ii~~l~~ 230 (254)
+. +..+-|++++..-++|||.|++=.- -+|+..-++..+.+.++. +.|
T Consensus 89 ----g~-~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La-~~p- 161 (316)
T 3e96_A 89 ----GY-ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLA-PLQ- 161 (316)
T ss_dssp ----CS-SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHT-TCT-
T ss_pred ----Cc-CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHH-cCC-
Confidence 11 4778899999999999999998531 136643356677777775 333
Q ss_pred CceE--Eec-CCchhHHHHHHHhC
Q 025344 231 EKTM--FEA-TNPRTSEWFIRRYG 251 (254)
Q Consensus 231 ~kli--fEA-P~k~qQ~~~I~~~G 251 (254)
+|+ =|+ ++-.+...+++..+
T Consensus 162 -nIvgiKdssgd~~~~~~~~~~~~ 184 (316)
T 3e96_A 162 -NLVGVKYAINDLPRFAKVVRSIP 184 (316)
T ss_dssp -TEEEEEECCCCHHHHHHHHTTSC
T ss_pred -CEEEEEeCCCCHHHHHHHHHhcC
Confidence 232 133 34445555555444
No 161
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=85.24 E-value=4.9 Score=35.72 Aligned_cols=77 Identities=17% Similarity=0.107 Sum_probs=57.7
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--C-CcccceeeeecCCCCCCCccccccccccccC
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~ 174 (254)
+.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. | ..|+ .|+
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvi--aGv---------------------- 78 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVI--AGT---------------------- 78 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEE--EEC----------------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEE--EeC----------------------
Confidence 368889999999999999665333 478999999999999883 1 1111 122
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 175 ~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+..+..+.|++++..-++|||-|++=.
T Consensus 79 -----g~~~t~~ai~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 79 -----GTNDTEKSIQASIQAKALGADAIMLIT 105 (292)
T ss_dssp -----CCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred -----CcccHHHHHHHHHHHHHcCCCEEEECC
Confidence 112478889999999999999999876
No 162
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=85.19 E-value=21 Score=32.12 Aligned_cols=164 Identities=10% Similarity=0.118 Sum_probs=95.6
Q ss_pred hhHHHHHHHhhcccc--cEEeecCcccccCChh-HHHHHHHHHHhCCceecC----CcHHHHHHHhCCchHHHHHHHHHH
Q 025344 40 HNVLEDIFESMGQFV--DGLKFSGGSHSLMPKP-FIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQ 112 (254)
Q Consensus 40 ~~~~~DlLe~ag~yI--D~lKfg~GT~~l~~~~-~l~eKi~l~~~~gV~v~~----Gtl~E~a~~qg~~~~~~yl~~~k~ 112 (254)
+..++.+|+.|-+.= =+|-++-|+...++.+ ...--..++++++|+|.. |. + .+.+..|-+
T Consensus 28 ~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~VPValHlDHg~-----------~-~e~i~~ai~ 95 (286)
T 1gvf_A 28 AETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHE-----------S-LDDIRRKVH 95 (286)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEEC-----------C-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEcCCCC-----------C-HHHHHHHHH
Confidence 445555555442210 1455555554444422 233334456667777764 31 1 255666778
Q ss_pred cCCCEEEecCCcccCChh--HHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHH
Q 025344 113 VGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRR 190 (254)
Q Consensus 113 lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~ 190 (254)
.||+.|=|.-...++.+- .=.++++++...|.-|--|+|.=-+. +-+...+.. +..+| ||++..+.
T Consensus 96 ~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~-ed~~~~~~~-~~~~T----------~Peea~~F 163 (286)
T 1gvf_A 96 AGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGV-EDDMSVDAE-SAFLT----------DPQEAKRF 163 (286)
T ss_dssp TTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-------------CCSSC----------CHHHHHHH
T ss_pred cCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCc-ccCcccccc-cccCC----------CHHHHHHH
Confidence 999999887665443322 12467888999999999999983211 100000000 01123 67776666
Q ss_pred HHHHHHcCCcEEEEec---ccccccCCCccHHHHHHHHhccCC
Q 025344 191 AERCLEAGADMIMIDS---DDVCKHADSLRADIIAKVIGRLGL 230 (254)
Q Consensus 191 ~~~dLeAGA~~ViiEa---rgi~d~~g~~r~d~i~~ii~~l~~ 230 (254)
+++ -|.|.+=+== -|.|..+-.++.|.+++|-+.+++
T Consensus 164 v~~---TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~v 203 (286)
T 1gvf_A 164 VEL---TGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDV 203 (286)
T ss_dssp HHH---HCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCCS
T ss_pred HHH---HCCCEEEeecCccccCcCCCCccCHHHHHHHHHhcCC
Confidence 653 6888654422 289998888999999999888763
No 163
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=85.17 E-value=6.6 Score=35.42 Aligned_cols=109 Identities=9% Similarity=0.111 Sum_probs=71.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcC---CcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAG---LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G---~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.- ..|+ +|+
T Consensus 33 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvi--aGv----------------------- 87 (318)
T 3qfe_A 33 SQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIM--AGV----------------------- 87 (318)
T ss_dssp HHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEE--EEC-----------------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEE--EeC-----------------------
Confidence 67888899999999999776543 3699999999999998831 1111 122
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEeccccccc--CCCccHHHHHHHHhccCCCceEEecCC
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKH--ADSLRADIIAKVIGRLGLEKTMFEATN 239 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~--~g~~r~d~i~~ii~~l~~~klifEAP~ 239 (254)
+..+..+.|++++..-++|||-|++=.--.|.. +.+---+-...|++..++-=++.--|.
T Consensus 88 ----g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~ 149 (318)
T 3qfe_A 88 ----GAHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPG 149 (318)
T ss_dssp ----CCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC
T ss_pred ----CCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCc
Confidence 112478889999999999999999855433321 111112233455566666666666664
No 164
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=85.06 E-value=5.6 Score=40.28 Aligned_cols=101 Identities=18% Similarity=0.223 Sum_probs=72.9
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~ 182 (254)
.+++++.+.+.|.+.|-|.+..-++ +.-...|+.+++.|..|. +.+... .++ .|+. + ..-
T Consensus 199 ~~~~i~~a~~~Gvd~irIf~s~n~l--~~l~~~i~~ak~~G~~v~--~~i~~~-~d~---~dp~--------r----~~~ 258 (718)
T 3bg3_A 199 VFKFCEVAKENGMDVFRVFDSLNYL--PNMLLGMEAAGSAGGVVE--AAISYT-GDV---ADPS--------R----TKY 258 (718)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSCCH--HHHHHHHHHHHTTTSEEE--EEEECC-SCT---TCTT--------C----CTT
T ss_pred hHHHHHHHHhcCcCEEEEEecHHHH--HHHHHHHHHHHHcCCeEE--EEEEee-ccc---cCCC--------C----CCC
Confidence 6899999999999999999866543 456678999999996543 444321 011 1211 0 011
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
|++.+++.++...++||+.| .|+|..|-..+..+.++++.+
T Consensus 259 ~~e~~~~~a~~l~~~Ga~~I-----~l~DT~G~~~P~~v~~lV~~l 299 (718)
T 3bg3_A 259 SLQYYMGLAEELVRAGTHIL-----CIKDMAGLLKPTACTMLVSSL 299 (718)
T ss_dssp CHHHHHHHHHHHHHHTCSEE-----EEECTTSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEE-----EEcCcCCCcCHHHHHHHHHHH
Confidence 68999999999999999866 468999999988887777544
No 165
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=85.05 E-value=13 Score=31.00 Aligned_cols=168 Identities=17% Similarity=0.210 Sum_probs=92.0
Q ss_pred CCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCC----hhHHHHHHHHHHhC--Cceec--CC-cH-
Q 025344 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMP----KPFIEEVVKRAHQH--DVYVS--TG-DW- 91 (254)
Q Consensus 22 R~~GlT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~----~~~l~eKi~l~~~~--gV~v~--~G-tl- 91 (254)
+..|+|.+++.|.+ +...+.+++.+..|=+ +..+.|.+.... ++.+++.-+++.++ .+.-. .| .+
T Consensus 29 ~~~Gv~~~v~~~~~----~~~~~~~~~l~~~~~~-~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~iGEiGld~~ 103 (259)
T 1zzm_A 29 AQAGVGKIIVPATE----AENFARVLALAENYQP-LYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLF 103 (259)
T ss_dssp HHTTEEEEEEECCS----GGGHHHHHHHHHHCTT-EEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEEEEEEEECC
T ss_pred HHcCCCEEEEecCC----HHHHHHHHHHHHhCCC-eEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEEEEeccCCC
Confidence 35799999988863 4566777777777766 666777654332 23355555566552 22111 01 11
Q ss_pred --HH-HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccc
Q 025344 92 --AE-HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFG 168 (254)
Q Consensus 92 --~E-~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~ 168 (254)
.+ ...+.. .|...++.|+++|...+ |-.+. ..+ ++++.+++.++.+ -++-... -|
T Consensus 104 ~~~~~~~~q~~--~f~~~~~~a~~~~~Pv~-iH~~~---a~~---~~~~il~~~~~~~---~~i~H~~--~g-------- 161 (259)
T 1zzm_A 104 GDDPQFERQQW--LLDEQLKLAKRYDLPVI-LHSRR---THD---KLAMHLKRHDLPR---TGVVHGF--SG-------- 161 (259)
T ss_dssp SSCCCHHHHHH--HHHHHHHHHHHTTCCEE-EEEES---CHH---HHHHHHHHHCCTT---CEEETTC--CS--------
T ss_pred CCCCCHHHHHH--HHHHHHHHHHHhCCcEE-EEecc---cHH---HHHHHHHhcCCCC---CEEEEcC--CC--------
Confidence 00 122333 68899999999998865 33322 233 4455555544321 0111110 00
Q ss_pred cccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceEEecCCc
Q 025344 169 AYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (254)
Q Consensus 169 ~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~klifEAP~k 240 (254)
+ .+.+++.++.|.+.-+ -+.-.|.+. ..+.++++.+|++||+||..-|
T Consensus 162 --------------~----~~~~~~~~~~g~~i~~-~g~~~~~~~-----~~~~~~~~~~~~dril~eTD~P 209 (259)
T 1zzm_A 162 --------------S----LQQAERFVQLGYKIGV-GGTITYPRA-----SKTRDVIAKLPLASLLLETDAP 209 (259)
T ss_dssp --------------C----HHHHHHHHHTTCEEEE-CGGGGCTTT-----CSHHHHHHHSCGGGEEECCCBT
T ss_pred --------------C----HHHHHHHHHCCCEEEE-Cceeecccc-----HHHHHHHHhCCHHHEEEecCCC
Confidence 1 3456666778866544 121112222 3366788889999999998754
No 166
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=85.02 E-value=3.4 Score=37.98 Aligned_cols=108 Identities=9% Similarity=0.102 Sum_probs=70.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+......|+ +|+ | .
T Consensus 48 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpVi--aGv-------g--~--------------- 101 (344)
T 2hmc_A 48 ALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVI--VGT-------G--A--------------- 101 (344)
T ss_dssp HHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEE--EEC-------C--C---------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEE--Eec-------C--C---------------
Confidence 5777888888889999877544 347999999999998333223333 333 1 1
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEecccccc-cCCCccHHHHHHHHh-ccCCCceEEecC
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCK-HADSLRADIIAKVIG-RLGLEKTMFEAT 238 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d-~~g~~r~d~i~~ii~-~l~~~klifEAP 238 (254)
.+..+.|++++..-++|||.|++=.--.+. ..-+---+-...|++ ..++-=++.--|
T Consensus 102 ---~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P 160 (344)
T 2hmc_A 102 ---VNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP 160 (344)
T ss_dssp ---SSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG
T ss_pred ---CCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence 147788999999999999999987653332 111111222345666 666666777777
No 167
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=84.72 E-value=5.2 Score=32.81 Aligned_cols=110 Identities=17% Similarity=0.204 Sum_probs=64.3
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~I 118 (254)
.+...+..++.- .|++ ++.+. + .+-++.+|++|+++.+|.. . .+-+..+.++|.+.|
T Consensus 72 ~~~~~~~a~~~G---ad~i-v~~~~----~----~~~~~~~~~~g~~vi~g~~----------t-~~e~~~a~~~Gad~v 128 (205)
T 1wa3_A 72 SVEQCRKAVESG---AEFI-VSPHL----D----EEISQFCKEKGVFYMPGVM----------T-PTELVKAMKLGHTIL 128 (205)
T ss_dssp SHHHHHHHHHHT---CSEE-ECSSC----C----HHHHHHHHHHTCEEECEEC----------S-HHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHcC---CCEE-EcCCC----C----HHHHHHHHHcCCcEECCcC----------C-HHHHHHHHHcCCCEE
Confidence 344555555544 4555 66553 3 3567788999999999731 1 112446688999999
Q ss_pred EecCCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHH
Q 025344 119 ELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLE 196 (254)
Q Consensus 119 EISdGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLe 196 (254)
-+.... ....+.++.+++. ...+...=|+ + .+.+...++
T Consensus 129 k~~~~~-----~~g~~~~~~l~~~~~~~pvia~GGI------------------------------~----~~~~~~~~~ 169 (205)
T 1wa3_A 129 KLFPGE-----VVGPQFVKAMKGPFPNVKFVPTGGV------------------------------N----LDNVCEWFK 169 (205)
T ss_dssp EETTHH-----HHHHHHHHHHHTTCTTCEEEEBSSC------------------------------C----TTTHHHHHH
T ss_pred EEcCcc-----ccCHHHHHHHHHhCCCCcEEEcCCC------------------------------C----HHHHHHHHH
Confidence 875421 1234566666552 1222222222 1 134566789
Q ss_pred cCCcEEEEecccccc
Q 025344 197 AGADMIMIDSDDVCK 211 (254)
Q Consensus 197 AGA~~ViiEargi~d 211 (254)
+||+.|.+ ++.++.
T Consensus 170 ~Ga~~v~v-Gs~i~~ 183 (205)
T 1wa3_A 170 AGVLAVGV-GSALVK 183 (205)
T ss_dssp HTCSCEEE-CHHHHC
T ss_pred CCCCEEEE-CccccC
Confidence 99999988 455666
No 168
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=84.45 E-value=5.4 Score=37.44 Aligned_cols=90 Identities=14% Similarity=0.140 Sum_probs=58.3
Q ss_pred HHHHHHHHHcCCCEEEec--------------CCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccc
Q 025344 104 KEYVEDCKQVGFDTIELN--------------VGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGA 169 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEIS--------------dGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~ 169 (254)
.+.++.++++|+++|-|- .|. -+.+.-+.++++|+++||+|+--|+..+...++++
T Consensus 51 ~d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~--~d~~~~~~~a~~Ak~~GLkVlldfHysD~WadPg~-------- 120 (399)
T 1ur4_A 51 QDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGN--NDLEKAIQIGKRATANGMKLLADFHYSDFWADPAK-------- 120 (399)
T ss_dssp CCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTC--CCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSC--------
T ss_pred chHHHHHHHCCCCEEEEeeecCCcccccCccCCCC--CCHHHHHHHHHHHHHCCCEEEEEeccCCccCCccc--------
Confidence 356788899999999981 122 34677788999999999999999988655444432
Q ss_pred ccccCCCccccccCHHHHH--------HHHHHHHHcCCcEEEEec
Q 025344 170 YVARAPRSTEYVEDVDLLI--------RRAERCLEAGADMIMIDS 206 (254)
Q Consensus 170 ~~~~~~~~~~~~~d~~~~i--------~~~~~dLeAGA~~ViiEa 206 (254)
-..|..|... +.+++. +.+++..++|+..-|++-
T Consensus 121 Q~~P~aW~~~---~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqv 162 (399)
T 1ur4_A 121 QKAPKAWANL---NFEDKKTALYQYTKQSLKAMKAAGIDIGMVQV 162 (399)
T ss_dssp CCCCGGGTTC---CHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCccccccC---CHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 1235567531 233222 234455578877666643
No 169
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=84.22 E-value=5.1 Score=36.54 Aligned_cols=50 Identities=14% Similarity=0.146 Sum_probs=37.5
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcc-c--CC----hhHHHHHHHHHHHcCCcccc
Q 025344 99 GPSAFKEYVEDCKQVGFDTIELNVGSL-E--IP----EETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 99 g~~~~~~yl~~~k~lGF~~IEISdGti-~--i~----~~~r~~lI~~~~~~G~~v~~ 148 (254)
.+-.+.+.++.++++||+.||+++.-+ . .+ .+...++-+.+++.|+++.+
T Consensus 31 ~~~~~~e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (393)
T 1xim_A 31 TALDPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIVPM 87 (393)
T ss_dssp CCCCHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCE
T ss_pred CCCCHHHHHHHHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEEEE
Confidence 334788999999999999999983221 1 12 45677888889999999754
No 170
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=84.13 E-value=3.9 Score=36.76 Aligned_cols=78 Identities=15% Similarity=0.089 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcC-CcccceeeeecCCCCCCCccccccccccccCCCc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAG-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G-~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~ 177 (254)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.- =++.-=+|+
T Consensus 30 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv------------------------- 84 (309)
T 3fkr_A 30 SQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT------------------------- 84 (309)
T ss_dssp HHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-------------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec-------------------------
Confidence 57778888888999998774332 4799999999999998831 010000111
Q ss_pred cccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 178 TEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 178 ~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+..+..+.|++++..-++|||-|++=.
T Consensus 85 --g~~~t~~ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 85 --SHYSTQVCAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp --CCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred --CCchHHHHHHHHHHHHHcCCCEEEEcC
Confidence 112478889999999999999999853
No 171
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=84.03 E-value=14 Score=34.25 Aligned_cols=139 Identities=17% Similarity=0.228 Sum_probs=87.6
Q ss_pred chhHHHHHHHhhcc--cccEEeecCcccccCChhHHHHHHHHHHhC-Cc-eecCCcHHHHHHHhCCchHHHHHHHHHHcC
Q 025344 39 SHNVLEDIFESMGQ--FVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DV-YVSTGDWAEHLIRNGPSAFKEYVEDCKQVG 114 (254)
Q Consensus 39 g~~~~~DlLe~ag~--yID~lKfg~GT~~l~~~~~l~eKi~l~~~~-gV-~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lG 114 (254)
....+..+++.+.+ -|.-+-|.+|--.+.+.+.|.+.++.+++. ++ .+.-+|-.=+.+-+- --+++++.+++.
T Consensus 146 s~eei~~~i~~i~~~~gi~~V~ltGGEPll~~d~~L~~il~~l~~~~~v~~i~i~Tng~~~~p~~--it~e~l~~L~~~- 222 (416)
T 2a5h_A 146 PMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRIGSRTPVVLPQR--ITPELVNMLKKY- 222 (416)
T ss_dssp CHHHHHHHHHHHHTCTTCCEEEEEESCTTSSCHHHHHHHHHHHHTSTTCCEEEEECSHHHHCGGG--CCHHHHHHHGGG-
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEECCCCCCCCHHHHHHHHHHHHhcCCccEEEEEeccccccccc--CCHHHHHHHHhc-
Confidence 45677777776554 367789999999999987899999999987 44 233233110011010 125677777777
Q ss_pred CCEEEecC---CcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHH
Q 025344 115 FDTIELNV---GSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRA 191 (254)
Q Consensus 115 F~~IEISd---Gti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~ 191 (254)
+.|-||- +.-.|. ++..+.|+++++.|+.+....-+-.+ + . | +.+.+.+.+
T Consensus 223 -~~v~Isl~~~~~~ei~-~~v~~ai~~L~~aGi~v~i~~vll~G---v--N-d------------------~~e~l~~l~ 276 (416)
T 2a5h_A 223 -HPVWLNTHFNHPNEIT-EESTRACQLLADAGVPLGNQSVLLRG---V--N-D------------------CVHVMKELV 276 (416)
T ss_dssp -CSEEEEECCCSGGGCC-HHHHHHHHHHHHTTCCEEEEEECCTT---T--T-C------------------SHHHHHHHH
T ss_pred -CcEEEEEecCCHHHHh-HHHHHHHHHHHHcCCEEEEEEEEECC---C--C-C------------------CHHHHHHHH
Confidence 5555542 333555 67779999999999876554433111 1 1 1 355667777
Q ss_pred HHHHHcCCcEEEEec
Q 025344 192 ERCLEAGADMIMIDS 206 (254)
Q Consensus 192 ~~dLeAGA~~ViiEa 206 (254)
+...+.|+....+.-
T Consensus 277 ~~l~~lgv~~~~i~~ 291 (416)
T 2a5h_A 277 NKLVKIRVRPYYIYQ 291 (416)
T ss_dssp HHHHHTTEEEEEEEC
T ss_pred HHHHHcCCceEEEee
Confidence 777789988765553
No 172
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=83.75 E-value=5 Score=36.12 Aligned_cols=100 Identities=18% Similarity=0.310 Sum_probs=57.1
Q ss_pred cchhHHHHHHHhhccccc----------EEeecCcccc-------cCChhHHHHHHHHHHhCCc---eecC-CcHHHHHH
Q 025344 38 SSHNVLEDIFESMGQFVD----------GLKFSGGSHS-------LMPKPFIEEVVKRAHQHDV---YVST-GDWAEHLI 96 (254)
Q Consensus 38 ~g~~~~~DlLe~ag~yID----------~lKfg~GT~~-------l~~~~~l~eKi~l~~~~gV---~v~~-Gtl~E~a~ 96 (254)
+|..+.+.+|...-.+|. ++|++.|-.. ..| ++.-|+++++-|+ ++|| ||+--
T Consensus 122 tgag~trg~L~~~~T~VNaLVSPTG~~G~VkISTGp~Sas~~~~~~V~---vetAiaml~dmG~~SvKffPM~Gl~~--- 195 (275)
T 3m6y_A 122 PSVGATRANLGEKDSWINSLVSPTGKVGYVNISTGPISAAGEEKAIVP---IKTAIALVRDMGGNSLKYFPMKGLAH--- 195 (275)
T ss_dssp GGHHHHHHHHTTCCCEEEEEEBCCSSTTEEECCCSTTGGGSSSCCEEE---HHHHHHHHHHHTCCEEEECCCTTTTT---
T ss_pred cchHHHHhhcCCCccEEEEEEcCCCCcceEEeccCCCccccCCCceee---HHHHHHHHHHcCCCeeeEeecCCccc---
Confidence 466677777765445543 5677777322 333 5667777777665 6777 54310
Q ss_pred HhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCc-cccee
Q 025344 97 RNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKF 150 (254)
Q Consensus 97 ~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~-v~~E~ 150 (254)
.+.+...-+.|.+-|| ++|=.-| |+.+...++++.+.+.|-+ |+|.+
T Consensus 196 ---leEl~avAkAca~~g~-~lEPTGG---Idl~Nf~~I~~i~l~aGv~~viPHI 243 (275)
T 3m6y_A 196 ---EEEYRAVAKACAEEGF-ALEPTGG---IDKENFETIVRIALEANVEQVIPHV 243 (275)
T ss_dssp ---HHHHHHHHHHHHHHTC-EEEEBSS---CCTTTHHHHHHHHHHTTCSCBCCEE
T ss_pred ---HHHHHHHHHHHHHcCc-eECCCCC---ccHhHHHHHHHHHHHcCCCeecccc
Confidence 0023333456667777 7776544 4445555666666666654 55554
No 173
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=83.42 E-value=15 Score=34.77 Aligned_cols=75 Identities=9% Similarity=0.168 Sum_probs=47.8
Q ss_pred HHHHH---HhhcccccEEeecCcc------cccCChhHHHHHHHHHHhC---------------------Cce-----ec
Q 025344 43 LEDIF---ESMGQFVDGLKFSGGS------HSLMPKPFIEEVVKRAHQH---------------------DVY-----VS 87 (254)
Q Consensus 43 ~~DlL---e~ag~yID~lKfg~GT------~~l~~~~~l~eKi~l~~~~---------------------gV~-----v~ 87 (254)
.+|++ +...+|.|++=+=.+| ..+..++.|.+.++-.++. .++ +.
T Consensus 198 ~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~ 277 (415)
T 3i65_A 198 VDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLA 277 (415)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEec
Confidence 45554 4456778887766554 3456777777777766553 333 34
Q ss_pred CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc
Q 025344 88 TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL 125 (254)
Q Consensus 88 ~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti 125 (254)
|+ |- . +.+.+..+.|.+.|.|.|-++|.+.
T Consensus 278 pd-~~-----~--~~i~~iA~~a~~aGaDgIiv~Ntt~ 307 (415)
T 3i65_A 278 PD-LN-----Q--EQKKEIADVLLETNIDGMIISNTTT 307 (415)
T ss_dssp SC-CC-----H--HHHHHHHHHHHHHTCSEEEECCCBS
T ss_pred CC-CC-----H--HHHHHHHHHHHHcCCcEEEEeCCCc
Confidence 44 20 1 1578888999999999999999886
No 174
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=83.37 E-value=2.9 Score=34.31 Aligned_cols=94 Identities=14% Similarity=0.062 Sum_probs=56.6
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~-gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~ 117 (254)
.+....++++..++++|++|+|++.+.-...+.+++.- +.+ ++++..+--+ .+ --+.|++.+.+.|.|.
T Consensus 11 ~~~~~~~~~~~~~~~v~~iev~~~~~~~~g~~~i~~l~---~~~~~~~i~~~l~~-----~d--i~~~~~~~a~~~Gad~ 80 (207)
T 3ajx_A 11 STEAALELAGKVAEYVDIIELGTPLIKAEGLSVITAVK---KAHPDKIVFADMKT-----MD--AGELEADIAFKAGADL 80 (207)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHH---HHSTTSEEEEEEEE-----CS--CHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHhhccCCEEEECcHHHHhhCHHHHHHHH---HhCCCCeEEEEEEe-----cC--ccHHHHHHHHhCCCCE
Confidence 45788889999999999999999865334444444322 223 5544432000 01 1244667778888888
Q ss_pred EEecCCcccCChhHHHHHHHHHHHcCCc
Q 025344 118 IELNVGSLEIPEETLLRYVRLVKSAGLK 145 (254)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~G~~ 145 (254)
|-|+.+.- .+.-.++++.+++.|..
T Consensus 81 v~vh~~~~---~~~~~~~~~~~~~~g~~ 105 (207)
T 3ajx_A 81 VTVLGSAD---DSTIAGAVKAAQAHNKG 105 (207)
T ss_dssp EEEETTSC---HHHHHHHHHHHHHHTCE
T ss_pred EEEeccCC---hHHHHHHHHHHHHcCCc
Confidence 87766543 23344566666666655
No 175
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=83.34 E-value=6 Score=36.82 Aligned_cols=99 Identities=11% Similarity=0.003 Sum_probs=66.0
Q ss_pred HHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--C-Ccccceeee
Q 025344 79 AHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--G-LKAKPKFAV 152 (254)
Q Consensus 79 ~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G-~~v~~E~g~ 152 (254)
.+-.||.+..=|.|----.=+.+.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. | ..|+ .|+
T Consensus 58 ~~~~Gi~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVi--aGv 135 (360)
T 4dpp_A 58 IKALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVI--GNT 135 (360)
T ss_dssp HHTCCEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEE--EEC
T ss_pred cccCCeEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEE--Eec
Confidence 3555775554443310001112267888899999999999884332 489999999999998873 1 1111 122
Q ss_pred ecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 153 MFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 153 k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
| ..+..+.|+.++..-++|||-|++=.
T Consensus 136 -------g--------------------~~st~eai~la~~A~~~Gadavlvv~ 162 (360)
T 4dpp_A 136 -------G--------------------SNSTREAIHATEQGFAVGMHAALHIN 162 (360)
T ss_dssp -------C--------------------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred -------C--------------------CCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 1 12478889999999999999999865
No 176
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=83.21 E-value=11 Score=34.71 Aligned_cols=46 Identities=13% Similarity=0.120 Sum_probs=29.4
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
+.++.++.++..-++|+++|-+=++...... ....+.+..|-+.++
T Consensus 249 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~-~~~~~~~~~v~~~~~ 294 (364)
T 1vyr_A 249 EEADALYLIEELAKRGIAYLHMSETDLAGGK-PYSEAFRQKVRERFH 294 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTBCC-CCCHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccCCC-cccHHHHHHHHHHCC
Confidence 5677888888888999999988765321111 123455565655554
No 177
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=82.97 E-value=12 Score=33.56 Aligned_cols=79 Identities=15% Similarity=0.029 Sum_probs=58.7
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcc---cCChhHHHHHHHHHHHcCC-cccceeeeecCCCCCCCccccccccccccCCC
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGSL---EIPEETLLRYVRLVKSAGL-KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti---~i~~~~r~~lI~~~~~~G~-~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~ 176 (254)
+.+.++++++-+-|.+.|=+.-.|- .|+.++|.++++.+.+.-= ++.-=+|+
T Consensus 28 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv------------------------ 83 (311)
T 3h5d_A 28 DAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV------------------------ 83 (311)
T ss_dssp THHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC------------------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC------------------------
Confidence 4788999999999999998865543 7999999999999988410 00000111
Q ss_pred ccccccCHHHHHHHHHHHHHcCC-cEEEEec
Q 025344 177 STEYVEDVDLLIRRAERCLEAGA-DMIMIDS 206 (254)
Q Consensus 177 ~~~~~~d~~~~i~~~~~dLeAGA-~~ViiEa 206 (254)
+..+..+.|++++..-++|| |-|++=.
T Consensus 84 ---g~~~t~~ai~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 84 ---GTNDTRDSIEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp ---CCSSHHHHHHHHHHHHHSCCCSEEEEEC
T ss_pred ---CCcCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 11247888999999999997 9998866
No 178
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=82.88 E-value=2.3 Score=35.70 Aligned_cols=79 Identities=11% Similarity=0.002 Sum_probs=49.1
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhC--Cceec--------CCcHHHHHHHhCC--------
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVS--------TGDWAEHLIRNGP-------- 100 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~--gV~v~--------~Gtl~E~a~~qg~-------- 100 (254)
.+....++++.+++|+|++|+|.|-+.-+..+.+++. +++ |..++ |.|+.|.+..-|-
T Consensus 14 ~~~~~~~~~~~~~~~v~~~kv~~~~f~~~G~~~i~~l----~~~~p~~~v~lD~kl~dip~t~~~~~~~~Gad~itvh~~ 89 (216)
T 1q6o_A 14 TMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDL----KALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICC 89 (216)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHH----HHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETT
T ss_pred CHHHHHHHHHHhcccCCEEEECHHHHHHhCHHHHHHH----HHhCCCCeEEEEEEecccHHHHHHHHHhCCCCEEEEecc
Confidence 4577888899999999999999987755555555443 333 44433 3466665544431
Q ss_pred ---chHHHHHHHHHHcCCCE-EEec
Q 025344 101 ---SAFKEYVEDCKQVGFDT-IELN 121 (254)
Q Consensus 101 ---~~~~~yl~~~k~lGF~~-IEIS 121 (254)
+.+.++++.+++.|..+ +.+.
T Consensus 90 ~g~~~l~~~~~~~~~~g~~~~~~ll 114 (216)
T 1q6o_A 90 ADINTAKGALDVAKEFNGDVQIELT 114 (216)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCceeeee
Confidence 12556666666666554 3443
No 179
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=82.81 E-value=16 Score=33.81 Aligned_cols=147 Identities=16% Similarity=0.115 Sum_probs=94.3
Q ss_pred HHHHHHhhcccccEEeecCcccccCCh----------hHHHHHHHHHHhCC--ceecCCcHHHHHHHhCCchHHHHHHHH
Q 025344 43 LEDIFESMGQFVDGLKFSGGSHSLMPK----------PFIEEVVKRAHQHD--VYVSTGDWAEHLIRNGPSAFKEYVEDC 110 (254)
Q Consensus 43 ~~DlLe~ag~yID~lKfg~GT~~l~~~----------~~l~eKi~l~~~~g--V~v~~Gtl~E~a~~qg~~~~~~yl~~~ 110 (254)
++..+++ =+|.+-+-..+|-++.+ +.+++-++.++++| +.+... +|.+...+++.+-+.++.+
T Consensus 80 i~~a~~~---g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~--~ed~~~~~~~~~~~~~~~~ 154 (382)
T 2ztj_A 80 AKVAVET---GVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFS--AEDTFRSEEQDLLAVYEAV 154 (382)
T ss_dssp HHHHHHT---TCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEE--ETTTTTSCHHHHHHHHHHH
T ss_pred HHHHHHc---CCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEE--EEeCCCCCHHHHHHHHHHH
Confidence 4444443 35666665555543321 44788899999999 765542 1223344445677778888
Q ss_pred HHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHH
Q 025344 111 KQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRR 190 (254)
Q Consensus 111 k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~ 190 (254)
.+. .+.|=|.|-.--+.+.+-.++|+.+++. +.+...+++-+ +. |...-+..
T Consensus 155 ~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~-~~~~~~i~~H~-Hn-------------------------d~GlAvAN 206 (382)
T 2ztj_A 155 APY-VDRVGLADTVGVATPRQVYALVREVRRV-VGPRVDIEFHG-HN-------------------------DTGCAIAN 206 (382)
T ss_dssp GGG-CSEEEEEETTSCCCHHHHHHHHHHHHHH-HTTTSEEEEEE-BC-------------------------TTSCHHHH
T ss_pred HHh-cCEEEecCCCCCCCHHHHHHHHHHHHHh-cCCCCeEEEEe-CC-------------------------CccHHHHH
Confidence 889 9999998888788888888999998883 00112244421 11 23334778
Q ss_pred HHHHHHcCCcEEEEecccccccCCCccHHHHH
Q 025344 191 AERCLEAGADMIMIDSDDVCKHADSLRADIIA 222 (254)
Q Consensus 191 ~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~ 222 (254)
+...++|||+.|=.=-.|+=...||...+.+-
T Consensus 207 ~laAv~aGa~~vd~tv~GlGeraGN~~lE~vv 238 (382)
T 2ztj_A 207 AYEAIEAGATHVDTTILGIGERNGITPLGGFL 238 (382)
T ss_dssp HHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHH
T ss_pred HHHHHHhCCCEEEEccccccccccchhHHHHH
Confidence 88889999996544345888899999988665
No 180
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=82.75 E-value=13 Score=34.05 Aligned_cols=46 Identities=9% Similarity=-0.088 Sum_probs=29.6
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
+.++.++.++..-++|+++|-+=++.. +..-....+.+..+-+.++
T Consensus 248 ~~~~~~~~a~~l~~~G~d~i~v~~~~~-~~~~~~~~~~~~~i~~~~~ 293 (365)
T 2gou_A 248 PILTYTAAAALLNKHRIVYLHIAEVDW-DDAPDTPVSFKRALREAYQ 293 (365)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBT-TBCCCCCHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCc-CCCCCccHHHHHHHHHHCC
Confidence 467888889998899999999866532 1111122355666655554
No 181
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=82.74 E-value=23 Score=30.71 Aligned_cols=101 Identities=16% Similarity=0.248 Sum_probs=63.0
Q ss_pred hHHHHHHHhhccc-ccEEeecCccc-ccCChhHHH-----------------HHHHHHHhC--CceecCCcHHHHHHHhC
Q 025344 41 NVLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH--DVYVSTGDWAEHLIRNG 99 (254)
Q Consensus 41 ~~~~DlLe~ag~y-ID~lKfg~GT~-~l~~~~~l~-----------------eKi~l~~~~--gV~v~~Gtl~E~a~~qg 99 (254)
..+.++++..-+. +|.+-+|.=-+ .+++-..+. +-++-.+++ ++++-.=+...-++..
T Consensus 31 ~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~- 109 (268)
T 1qop_A 31 EQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNN- 109 (268)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTT-
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHh-
Confidence 4555555554444 99999986221 223333444 445555655 3332110223334444
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 025344 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (254)
.+++|++.|.+.|.+.|=+.| ++.++..++++.++++|+++.+
T Consensus 110 --g~~~~~~~~~~aGadgii~~d----~~~e~~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 110 --GIDAFYARCEQVGVDSVLVAD----VPVEESAPFRQAALRHNIAPIF 152 (268)
T ss_dssp --CHHHHHHHHHHHTCCEEEETT----CCGGGCHHHHHHHHHTTCEEEC
T ss_pred --hHHHHHHHHHHcCCCEEEEcC----CCHHHHHHHHHHHHHcCCcEEE
Confidence 479999999999999888864 4457778999999999987644
No 182
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=82.70 E-value=5.4 Score=35.49 Aligned_cols=40 Identities=15% Similarity=0.196 Sum_probs=20.4
Q ss_pred HHHHHHHHHHcCCcEEEEecc-ccc-ccCCCccHHHHHHHHh
Q 025344 187 LIRRAERCLEAGADMIMIDSD-DVC-KHADSLRADIIAKVIG 226 (254)
Q Consensus 187 ~i~~~~~dLeAGA~~ViiEar-gi~-d~~g~~r~d~i~~ii~ 226 (254)
+-+-.+-||+||+.+||=-== .|. ...|+-|.+.+.+|+.
T Consensus 201 ~~~I~~i~l~aGv~~viPHIYssIIDk~TG~TrpedV~~ll~ 242 (249)
T 3m0z_A 201 YSEILKIALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLLE 242 (249)
T ss_dssp HHHHHHHHHHHTCSCBCCBCCGGGBCTTTCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHH
Confidence 344455556666666552221 233 2346666666666654
No 183
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=82.58 E-value=4.2 Score=37.81 Aligned_cols=65 Identities=12% Similarity=0.090 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHcCCCEEEec--CCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCc
Q 025344 102 AFKEYVEDCKQVGFDTIELN--VGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEIS--dGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~ 177 (254)
...++++.+.+.|++.|+|. .|. + +.-.+.|+.+++. +..|.. ++ + .
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~---~-~~~~e~I~~ir~~~~~~~Vi~----G~----V-----------~------ 150 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAH---A-KYVGKTLKSLRQLLGSRCIMA----GN----V-----------A------ 150 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCS---S-HHHHHHHHHHHHHHTTCEEEE----EE----E-----------C------
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCC---c-HhHHHHHHHHHHhcCCCeEEE----cC----c-----------C------
Confidence 46678899999999999994 553 2 2334678888875 333322 10 1 1
Q ss_pred cccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 178 TEYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 178 ~~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
+ .+.++...++|||.|.+
T Consensus 151 -----T----~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 151 -----T----YAGADYLASCGADIIKA 168 (361)
T ss_dssp -----S----HHHHHHHHHTTCSEEEE
T ss_pred -----C----HHHHHHHHHcCCCEEEE
Confidence 2 45688889999999998
No 184
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=82.52 E-value=12 Score=33.24 Aligned_cols=85 Identities=15% Similarity=0.267 Sum_probs=61.6
Q ss_pred ccEEee-cCcccccCChhHHHHHHHHHHhCCceec--C-CcHHHHHHHhCCchHHHHHHHHHHcC--CCEEEecCCccc-
Q 025344 54 VDGLKF-SGGSHSLMPKPFIEEVVKRAHQHDVYVS--T-GDWAEHLIRNGPSAFKEYVEDCKQVG--FDTIELNVGSLE- 126 (254)
Q Consensus 54 ID~lKf-g~GT~~l~~~~~l~eKi~l~~~~gV~v~--~-Gtl~E~a~~qg~~~~~~yl~~~k~lG--F~~IEISdGti~- 126 (254)
++.+-| |+|...++| .+.+.++.++++|+.+. + |++ ++.++.+++.| .+.|-||=-+.+
T Consensus 142 ~~~v~~sggGEPll~~--~l~~ll~~~~~~g~~i~l~TNG~~------------~e~l~~L~~~g~~~~~l~isld~~~~ 207 (342)
T 2yx0_A 142 PTHAAISLSGEPMLYP--YMGDLVEEFHKRGFTTFIVTNGTI------------PERLEEMIKEDKLPTQLYVSITAPDI 207 (342)
T ss_dssp CCEEEECSSSCGGGST--THHHHHHHHHHTTCEEEEEECSCC------------HHHHHHHHHTTCCCSEEEEEECCSSH
T ss_pred CCEEEEcCCCcccchh--hHHHHHHHHHHCCCcEEEEcCCCc------------HHHHHHHHhcCCCCCEEEEEccCCCH
Confidence 566888 588888887 39999999999997544 4 443 45566778877 899999854431
Q ss_pred ------------CChhHHHHHHHHHHHcCCcccceeee
Q 025344 127 ------------IPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 127 ------------i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
-+.+...+.|+.+++.|+.+..++-+
T Consensus 208 e~~~~i~~~~~~~~~~~~~~~i~~l~~~g~~v~i~~~l 245 (342)
T 2yx0_A 208 ETYNSVNIPMIPDGWERILRFLELMRDLPTRTVVRLTL 245 (342)
T ss_dssp HHHHHHHCBSSSCHHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred HHHHHHhCCCcccHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 12566678888888888876666655
No 185
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=82.40 E-value=7.7 Score=41.22 Aligned_cols=102 Identities=19% Similarity=0.144 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
..+++++.+.+.|.+.|-|.+..-+ .+.-...|+.+++.|..| ++.+.... .+ .|+ ++ +.
T Consensus 646 ~~~~~i~~a~~~g~d~irif~sl~~--~~~~~~~i~~~~~~g~~v--~~~i~~~~-~~---~d~--------~r----~~ 705 (1165)
T 2qf7_A 646 VVKYFVRQAAKGGIDLFRVFDCLNW--VENMRVSMDAIAEENKLC--EAAICYTG-DI---LNS--------AR----PK 705 (1165)
T ss_dssp HHHHHHHHHHHHTCCEEEEECTTCC--GGGGHHHHHHHHHTTCEE--EEEEECCS-CT---TCT--------TS----GG
T ss_pred hHHHHHHHHHhcCcCEEEEEeeHHH--HHHHHHHHHHHHhccceE--EEEEEEec-cc---cCC--------CC----CC
Confidence 3578999999999999999765433 345567899999999655 44443211 11 122 11 12
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
.|++.+++.+++..++||+.| .|+|..|-..+..+.++++.+
T Consensus 706 ~~~~~~~~~~~~~~~~Ga~~i-----~l~DT~G~~~P~~~~~lv~~l 747 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAGAHII-----AVKDMAGLLKPAAAKVLFKAL 747 (1165)
T ss_dssp GCHHHHHHHHHHHHHTTCSEE-----EEEETTCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEE-----EEeCccCCcCHHHHHHHHHHH
Confidence 369999999999999999966 478999999998888887654
No 186
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=81.98 E-value=9.9 Score=33.90 Aligned_cols=80 Identities=19% Similarity=0.220 Sum_probs=49.1
Q ss_pred HHHHHHHHHHc--CCCEEEecCCcccCC-------hhHHHHHHHHHHHc--------CCcccceeeeecCCCCCCCcccc
Q 025344 103 FKEYVEDCKQV--GFDTIELNVGSLEIP-------EETLLRYVRLVKSA--------GLKAKPKFAVMFNKSDIPSDRDR 165 (254)
Q Consensus 103 ~~~yl~~~k~l--GF~~IEISdGti~i~-------~~~r~~lI~~~~~~--------G~~v~~E~g~k~~~s~v~~~~d~ 165 (254)
.++|.+.++.+ |||+|||+-++=..+ .+.-.++|+.+++. |- -+| +.+|-.
T Consensus 152 ~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~-~~P-v~vKi~---------- 219 (336)
T 1f76_A 152 KDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHK-YVP-IAVKIA---------- 219 (336)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTS-CCC-EEEECC----------
T ss_pred HHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccc-cCc-eEEEec----------
Confidence 67776666533 699999986543322 22224566666653 10 012 455421
Q ss_pred ccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEeccc
Q 025344 166 AFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD 208 (254)
Q Consensus 166 ~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEarg 208 (254)
+ .| +.++.++.++...++|+|.|++-.+.
T Consensus 220 -------~-~~------~~~~~~~~a~~l~~~Gvd~i~vsn~~ 248 (336)
T 1f76_A 220 -------P-DL------SEEELIQVADSLVRHNIDGVIATNTT 248 (336)
T ss_dssp -------S-CC------CHHHHHHHHHHHHHTTCSEEEECCCB
T ss_pred -------C-CC------CHHHHHHHHHHHHHcCCcEEEEeCCc
Confidence 1 12 35678888999999999999997653
No 187
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=81.88 E-value=5.4 Score=34.31 Aligned_cols=94 Identities=22% Similarity=0.237 Sum_probs=58.7
Q ss_pred HHHHHHHHcCCCEE--EecCCcccCChhH----HHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 105 EYVEDCKQVGFDTI--ELNVGSLEIPEET----LLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 105 ~yl~~~k~lGF~~I--EISdGti~i~~~~----r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
+-++.+.+.|++.| -+..|+. +.++ -.++++.+++.|..++.|.+.. +. . + +..+
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~--~~~~~~~~~~~v~~~~~~~g~~viv~~~~~-G~-~------------l-~~~~-- 163 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSD--EDWEAYRDLGMIAETCEYWGMPLIAMMYPR-GK-H------------I-QNER-- 163 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETST--THHHHHHHHHHHHHHHHHHTCCEEEEEEEC-ST-T------------C-SCTT--
T ss_pred HHHHHHHHcCCCEEEEEEecCCC--CHHHHHHHHHHHHHHHHHcCCCEEEEeCCC-Cc-c------------c-CCCC--
Confidence 44667888999999 7778865 4433 3456677777899988886531 11 1 1 1112
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
+++...+.++...++|||+|.+-- ....+.+.++.+.++
T Consensus 164 ----~~~~~~~~a~~a~~~Gad~i~~~~--------~~~~~~l~~i~~~~~ 202 (273)
T 2qjg_A 164 ----DPELVAHAARLGAELGADIVKTSY--------TGDIDSFRDVVKGCP 202 (273)
T ss_dssp ----CHHHHHHHHHHHHHTTCSEEEECC--------CSSHHHHHHHHHHCS
T ss_pred ----CHhHHHHHHHHHHHcCCCEEEECC--------CCCHHHHHHHHHhCC
Confidence 344444444888999999999862 123555666655443
No 188
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=81.68 E-value=3.7 Score=37.49 Aligned_cols=95 Identities=17% Similarity=0.206 Sum_probs=60.3
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHH---HHHHH-cCCcccceeeeecCCCCCCCcccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYV---RLVKS-AGLKAKPKFAVMFNKSDIPSDRDRAF 167 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI---~~~~~-~G~~v~~E~g~k~~~s~v~~~~d~~~ 167 (254)
+-+-++.+.+.|..+|-|=|+.. -+|.++-++-| +.+++ .| +.|-+. . .-|.
T Consensus 105 v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~----~d~~I~---A----RTDa-- 171 (307)
T 3lye_A 105 VARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLR----SDFVLI---A----RTDA-- 171 (307)
T ss_dssp HHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTT----CCCEEE---E----EECC--
T ss_pred HHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC----CCeEEE---E----echh--
Confidence 33445666778999999999864 35677644444 44443 12 223331 0 1111
Q ss_pred ccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 168 GAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 168 ~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
+ .....++.|++++...+||||.|.+|+- -..+.+.+|.+.++
T Consensus 172 ---~--------~~~gldeAi~Ra~ay~eAGAD~ifi~~~--------~~~~~~~~i~~~~~ 214 (307)
T 3lye_A 172 ---L--------QSLGYEECIERLRAARDEGADVGLLEGF--------RSKEQAAAAVAALA 214 (307)
T ss_dssp ---H--------HHHCHHHHHHHHHHHHHTTCSEEEECCC--------SCHHHHHHHHHHHT
T ss_pred ---h--------hccCHHHHHHHHHHHHHCCCCEEEecCC--------CCHHHHHHHHHHcc
Confidence 0 0125889999999999999999999973 13566777777664
No 189
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A*
Probab=81.67 E-value=3.4 Score=41.26 Aligned_cols=89 Identities=17% Similarity=0.324 Sum_probs=56.8
Q ss_pred cccccEEeecCccc----ccCChhHHHHHHHHHHhCCceecCCc-------------HHHHHHHhCCc----hHHHHHHH
Q 025344 51 GQFVDGLKFSGGSH----SLMPKPFIEEVVKRAHQHDVYVSTGD-------------WAEHLIRNGPS----AFKEYVED 109 (254)
Q Consensus 51 g~yID~lKfg~GT~----~l~~~~~l~eKi~l~~~~gV~v~~Gt-------------l~E~a~~qg~~----~~~~yl~~ 109 (254)
=+|||..=. |+-+ .+.|+ =..=|+.||+|||+|. || |++-++.++.+ -+++.++.
T Consensus 89 W~yvD~fvy-fshs~~~~~~~~P--~~~widaAHrnGV~Vl-Gt~~fe~~~~gg~~~~~~~lL~~~~~~~~~~a~kLv~~ 164 (626)
T 2vtf_A 89 WHYTDLMVY-WAGSAGEGIIVPP--SADVIDASHRNGVPIL-GNVFFPPTVYGGQLEWLEQMLEQEEDGSFPLADKLLEV 164 (626)
T ss_dssp GGGCSEEEE-CCCBTTTBSEECC--CHHHHHHHHHTTCCEE-EEEEECCGGGTCCHHHHHHHTCCCTTCCCHHHHHHHHH
T ss_pred ccceeeeee-ecCCCccceeeCC--CcHHHHHHHHcCCEEE-EEEecCcccCCcHHHHHHHHhccCccchHHHHHHHHHH
Confidence 368897643 4222 23343 2456899999999876 33 45555544422 27999999
Q ss_pred HHHcCCCEEEecCCcccCChhHH---HHHHHHHHHcC
Q 025344 110 CKQVGFDTIELNVGSLEIPEETL---LRYVRLVKSAG 143 (254)
Q Consensus 110 ~k~lGF~~IEISdGti~i~~~~r---~~lI~~~~~~G 143 (254)
|+.+|||.+=|+-=+-.++.+.. ..+++.+++.+
T Consensus 165 a~~yGFDGw~IN~E~~~~~~~~~~~l~~F~~~L~~~~ 201 (626)
T 2vtf_A 165 ADYYGFDGWFINQQTEGADEGTAEAMQAFLVYLQEQK 201 (626)
T ss_dssp HHHHTCCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHhCCCceEEeeccccCCHHHHHHHHHHHHHHHHhC
Confidence 99999999888766534555443 44555555543
No 190
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=81.66 E-value=3.8 Score=37.47 Aligned_cols=92 Identities=20% Similarity=0.210 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-----CC--hhHHHHHHHHHHHcCCcccceeeeecC-----CCCCCCcccccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLE-----IP--EETLLRYVRLVKSAGLKAKPKFAVMFN-----KSDIPSDRDRAFGA 169 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~-----i~--~~~r~~lI~~~~~~G~~v~~E~g~k~~-----~s~v~~~~d~~~~~ 169 (254)
.+.+.++.++++||+.||++...+. ++ .+...++-+.+++.|+++..--..-+. ...+.+ .|++
T Consensus 34 ~l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~~-~d~~--- 109 (394)
T 1xla_A 34 DPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTS-NDRS--- 109 (394)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCEEECCCSSSGGGTTCSTTC-SSHH---
T ss_pred CHHHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEEEecCccCCccccCCccCC-CCHH---
Confidence 3788899999999999999863221 11 346677888889999987642110000 001110 1110
Q ss_pred ccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 170 YVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 170 ~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
......+.+.+.++..-+.||..|.+=+
T Consensus 110 ---------~r~~~i~~~~~~i~~A~~LGa~~vvv~~ 137 (394)
T 1xla_A 110 ---------IRRFALAKVLHNIDLAAEMGAETFVMWG 137 (394)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHTTCSEEEECC
T ss_pred ---------HHHHHHHHHHHHHHHHHHhCCCEEEECC
Confidence 0011245556666666678999998853
No 191
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=81.58 E-value=28 Score=31.39 Aligned_cols=162 Identities=15% Similarity=0.135 Sum_probs=96.1
Q ss_pred chhHHHHHHHhhccc--ccEEeecCccccc-CChhHHHHHH-HHHH--hCCceecC----CcHHHHHHHhCCchHHHHHH
Q 025344 39 SHNVLEDIFESMGQF--VDGLKFSGGSHSL-MPKPFIEEVV-KRAH--QHDVYVST----GDWAEHLIRNGPSAFKEYVE 108 (254)
Q Consensus 39 g~~~~~DlLe~ag~y--ID~lKfg~GT~~l-~~~~~l~eKi-~l~~--~~gV~v~~----Gtl~E~a~~qg~~~~~~yl~ 108 (254)
.+..++.+++.|-+- ==+|-++-|+... .+.+.+...+ .+++ .++|+|.. |..+|. +.
T Consensus 30 n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~------------i~ 97 (288)
T 3q94_A 30 NLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEK------------CK 97 (288)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHHH------------HH
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHHH------------HH
Confidence 345555555544321 0134455444444 2444444443 3556 67777764 445553 44
Q ss_pred HHHHcCCCEEEecCCcccCChh--HHHHHHHHHHHcCCcccceeeeecCCCCCCCccccc-cccccccCCCccccccCHH
Q 025344 109 DCKQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRA-FGAYVARAPRSTEYVEDVD 185 (254)
Q Consensus 109 ~~k~lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~-~~~~~~~~~~~~~~~~d~~ 185 (254)
.|-+.||+.|=|.-...++.+- .=.++++.+...|.-|--|+|.=-+. +++.. -+..+| ||+
T Consensus 98 ~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~-----Ed~~~~~~~~yT----------~Pe 162 (288)
T 3q94_A 98 EAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQ-----EDDVIAEGVIYA----------DPA 162 (288)
T ss_dssp HHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCS-----CSSCGGGGCBCC----------CHH
T ss_pred HHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccc-----cCCcCCccccCC----------CHH
Confidence 5677899999996655544322 22378889999999999999983211 11110 011123 566
Q ss_pred HHHHHHHHHHHcCCcEEEEe---cccccccCCCccHHHHHHHHhccCC
Q 025344 186 LLIRRAERCLEAGADMIMID---SDDVCKHADSLRADIIAKVIGRLGL 230 (254)
Q Consensus 186 ~~i~~~~~dLeAGA~~ViiE---argi~d~~g~~r~d~i~~ii~~l~~ 230 (254)
+..+.++ +-|.|.+=+= +-|.|..+-.++.|.+++|-+.++.
T Consensus 163 ea~~Fv~---~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~v 207 (288)
T 3q94_A 163 ECKHLVE---ATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTGV 207 (288)
T ss_dssp HHHHHHH---HHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHCS
T ss_pred HHHHHHH---HHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcCC
Confidence 6555544 4688876553 2389987888999999999887763
No 192
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=81.48 E-value=11 Score=35.02 Aligned_cols=91 Identities=20% Similarity=0.254 Sum_probs=60.1
Q ss_pred CChhHHHHHHHHHHhCC---ceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe--cCCcccCChhHHHHHHHHHHH
Q 025344 67 MPKPFIEEVVKRAHQHD---VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL--NVGSLEIPEETLLRYVRLVKS 141 (254)
Q Consensus 67 ~~~~~l~eKi~l~~~~g---V~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEI--SdGti~i~~~~r~~lI~~~~~ 141 (254)
++.+.+.+-|+..++.+ |-+..|+ . ....+.++.+.+.|.+.|+| +.| +.+...+.|+.+++
T Consensus 79 ~s~e~~~~~i~~vk~~~~l~vga~vg~-------~--~~~~~~~~~lieaGvd~I~idta~G----~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 79 MSIEQQAAQVHQVKISGGLRVGAAVGA-------A--PGNEERVKALVEAGVDVLLIDSSHG----HSEGVLQRIRETRA 145 (366)
T ss_dssp SCHHHHHHHHHHHHTTTSCCCEEECCS-------C--TTCHHHHHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCceeEEEEecc-------C--hhHHHHHHHHHhCCCCEEEEeCCCC----CCHHHHHHHHHHHH
Confidence 45566888888888764 3222232 1 24677889999999999998 334 23456678888888
Q ss_pred c--CCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 142 A--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 142 ~--G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
. +..|+. |- + . + .+.++...+||||.|.+
T Consensus 146 ~~p~v~Vi~--G~------v-----------~-----------t----~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 146 AYPHLEIIG--GN------V-----------A-----------T----AEGARALIEAGVSAVKV 176 (366)
T ss_dssp HCTTCEEEE--EE------E-----------C-----------S----HHHHHHHHHHTCSEEEE
T ss_pred hcCCCceEe--ee------e-----------C-----------C----HHHHHHHHHcCCCEEEE
Confidence 5 222221 10 0 1 1 56788889999999999
No 193
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=81.46 E-value=3 Score=37.92 Aligned_cols=161 Identities=14% Similarity=0.121 Sum_probs=99.6
Q ss_pred CCCceeEecCCCCCCcchhHHHHHHHhh-cccccEEeecCcccccCC-hhHHHHHHHHHHh-CCcee---cC---Cc---
Q 025344 23 RFGVTEMRSPHYTLSSSHNVLEDIFESM-GQFVDGLKFSGGSHSLMP-KPFIEEVVKRAHQ-HDVYV---ST---GD--- 90 (254)
Q Consensus 23 ~~GlT~V~DkG~~~~~g~~~~~DlLe~a-g~yID~lKfg~GT~~l~~-~~~l~eKi~l~~~-~gV~v---~~---Gt--- 90 (254)
..|+-.++||-=.+ ...+..+++.+ -...|.+=+| |.-+.. ++.+.+-++.+++ +++++ .| |.
T Consensus 38 ~~~~~~liDPdK~~---~~~~~~~~~~~~~sGtDai~VG--S~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~~ 112 (286)
T 3vk5_A 38 QPGPVHIIDPFKVP---VTEAVEKAAELTRLGFAAVLLA--STDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGFP 112 (286)
T ss_dssp CCEEEEEECTTTSC---HHHHHHHHHHHHHTTCSCEEEE--CSCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBSC
T ss_pred cCCceEEECCCCCC---cHHHHHHHHHHHhcCCCEEEEc--cCCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCccc
Confidence 56889999997533 23433344443 4458999999 554540 4459999999999 78744 33 21
Q ss_pred --------------------H----HHHHHH---------------------h----------------CCchH--HHHH
Q 025344 91 --------------------W----AEHLIR---------------------N----------------GPSAF--KEYV 107 (254)
Q Consensus 91 --------------------l----~E~a~~---------------------q----------------g~~~~--~~yl 107 (254)
| ||+... - .++-. ..|-
T Consensus 113 i~~~aDa~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~ge~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa 192 (286)
T 3vk5_A 113 VVRGADALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWPELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYL 192 (286)
T ss_dssp CCTTCSEEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCCEEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHH
T ss_pred cccCCCEEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhCCcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHH
Confidence 2 233311 0 12223 6899
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc---CCcccceeeeecCCCCCCCccccccccccccCCCccccccCH
Q 025344 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA---GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDV 184 (254)
Q Consensus 108 ~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~---G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~ 184 (254)
....++|+..|=+.-+.- ..-.++|+++++. ...+..-+|+. |
T Consensus 193 ~~gad~G~~lV~LD~~~~----~v~~e~V~~I~~~~~~~iPV~vGGGIr-----------------------------s- 238 (286)
T 3vk5_A 193 HVARAFGFHMVYLYSRNE----HVPPEVVRHFRKGLGPDQVLFVSGNVR-----------------------------S- 238 (286)
T ss_dssp HHHHHTTCSEEEEECSSS----CCCHHHHHHHHHHSCTTCEEEEESSCC-----------------------------S-
T ss_pred HHHHHcCCCEEEEcCCCC----cCCHHHHHHHHHhcCCCCCEEEEeCCC-----------------------------C-
Confidence 999999999998886552 2223677777764 23333334441 2
Q ss_pred HHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 185 DLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 185 ~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
.+++++.+++|||.|+|=+- ++++. -.+++.+++.+.+
T Consensus 239 ---~Eda~~ll~aGAD~VVVGSA-av~d~---~Pelv~e~a~~~~ 276 (286)
T 3vk5_A 239 ---GRQVTEYLDSGADYVGFAGA-LEQPD---WRSALAEIAGRRP 276 (286)
T ss_dssp ---HHHHHHHHHTTCSEEEESGG-GSSTT---HHHHHHHHHC---
T ss_pred ---HHHHHHHHHcCCCEEEECch-hhcCC---CHHHHHHHHHhCC
Confidence 67888899999999999664 33322 2477888886653
No 194
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=81.25 E-value=23 Score=30.84 Aligned_cols=165 Identities=11% Similarity=0.101 Sum_probs=98.5
Q ss_pred CCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCCh---hHHHHHHHHHHhCCceec-CC-cHH----
Q 025344 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPK---PFIEEVVKRAHQHDVYVS-TG-DWA---- 92 (254)
Q Consensus 22 R~~GlT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~---~~l~eKi~l~~~~gV~v~-~G-tl~---- 92 (254)
+..|+..|. .|. .+...+..++.+..| +.+..+.|-+.-+.. +.+.+..+++.+. |-+- .| .+.
T Consensus 24 ~~~gV~~i~-v~~----~~~~~~~~~~la~~~-~~v~~~~GiHP~~~~~~~~~l~~l~~~~~~~-vaIGEiGLD~~~~~~ 96 (254)
T 3gg7_A 24 EERQLTVLS-VTT----TPAAWRGTLALAAGR-PHVWTALGFHPEVVSERAADLPWFDRYLPET-RFVGEVGLDGSPSLR 96 (254)
T ss_dssp HHTTCEEEE-CCS----SGGGHHHHHGGGTTC-TTEEECBCCCGGGTTTTGGGTHHHHHHGGGC-SEEEEEECCCCGGGG
T ss_pred HHCCCcEEE-ecC----CHHHHHHHHHHHHhC-CCeEEEEeeCcccccccHHHHHHHHHHhhhc-cEEEEEecCCCcccC
Confidence 356888776 475 567999999999998 557788887664432 3355555565432 2221 13 111
Q ss_pred H-HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 025344 93 E-HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (254)
Q Consensus 93 E-~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~ 171 (254)
. ...++. .|...++.|+++|...|-|=..- ..+ ++++.+++.+.. --++-...+ |
T Consensus 97 ~~~~~Q~~--~F~~ql~lA~e~~lPviSiH~r~---a~~---~~~~il~~~~~~---~~~v~H~fs--G----------- 152 (254)
T 3gg7_A 97 GTWTQQFA--VFQHILRRCEDHGGRILSIHSRR---AES---EVLNCLEANPRS---GTPILHWYS--G----------- 152 (254)
T ss_dssp GGHHHHHH--HHHHHHHHHHHTTCEEEEEECTT---CHH---HHHHHHHHCGGG---EEEEEETCC--S-----------
T ss_pred CCHHHHHH--HHHHHHHHHHHcCCCEEEEEcCC---cHH---HHHHHHHHcCCC---CcEEEEeCC--C-----------
Confidence 1 233444 79999999999999987332221 233 455555554211 111321111 1
Q ss_pred ccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceEEecCCc
Q 025344 172 ARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (254)
Q Consensus 172 ~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~klifEAP~k 240 (254)
+ .+++++.++.|.+.=+- |..- +.+.+.++++.+|++||++|...|
T Consensus 153 -----------~----~e~a~~~l~~G~yis~~---g~~~-----~~~~~~~~v~~ip~drlLlETD~P 198 (254)
T 3gg7_A 153 -----------S----VTELRRAISLGCWFSVG---PTMV-----RTQKGAALIRSMPRDRVLTETDGP 198 (254)
T ss_dssp -----------C----HHHHHHHHHTTCEEEEC---HHHH-----TSHHHHHHHHHSCGGGEEECCCTT
T ss_pred -----------C----HHHHHHHHcCCcEEEEC---cccC-----chHHHHHHHHHcCCCeEEEeCCCC
Confidence 1 56777788888665221 2211 345678899999999999998765
No 195
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=80.77 E-value=3.2 Score=37.88 Aligned_cols=99 Identities=15% Similarity=0.226 Sum_probs=61.9
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~ 171 (254)
+-+-.+.+.+.|..+|-|=|... -+|.++-++=|+.+++.-=..-++|-+- .. -|. +
T Consensus 97 v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~---AR----TDa-----~ 164 (302)
T 3fa4_A 97 VARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVI---AR----TDS-----L 164 (302)
T ss_dssp HHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEE---EE----ECC-----H
T ss_pred HHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEE---EE----ecc-----c
Confidence 34445666678999999998764 3577766666665554200001223331 01 111 0
Q ss_pred ccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 172 ARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 172 ~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
.....++.|++++...+||||.|.+|+- -..+.+.+|.+.++
T Consensus 165 --------~~~gldeAi~Ra~ay~eAGAD~ifi~g~--------~~~~ei~~~~~~~~ 206 (302)
T 3fa4_A 165 --------QTHGYEESVARLRAARDAGADVGFLEGI--------TSREMARQVIQDLA 206 (302)
T ss_dssp --------HHHCHHHHHHHHHHHHTTTCSEEEETTC--------CCHHHHHHHHHHTT
T ss_pred --------ccCCHHHHHHHHHHHHHcCCCEEeecCC--------CCHHHHHHHHHHhc
Confidence 0235899999999999999999999983 13566777777663
No 196
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=80.52 E-value=4.1 Score=34.24 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=28.3
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCCh-hHHHHHHHHHHHc
Q 025344 104 KEYVEDCKQVGFDTIELNVGSLEIPE-ETLLRYVRLVKSA 142 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~-~~r~~lI~~~~~~ 142 (254)
.++++.+.+.|.+.|.+......-|. +...++|+.+++.
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~ 130 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEK 130 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHh
Confidence 56788899999999998766543331 2345788888886
No 197
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=80.42 E-value=9.3 Score=36.40 Aligned_cols=27 Identities=19% Similarity=0.207 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccc
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDV 209 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi 209 (254)
+.+++.+.++...++|||.|++=.+..
T Consensus 309 ~~ed~~~iA~~~~~aGaDgI~v~ntt~ 335 (443)
T 1tv5_A 309 NQEQKKEIADVLLETNIDGMIISNTTT 335 (443)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCBS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 356888999999999999999988754
No 198
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=80.27 E-value=4.7 Score=37.43 Aligned_cols=95 Identities=13% Similarity=0.122 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccC--------Chh----HHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEI--------PEE----TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGA 169 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i--------~~~----~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~ 169 (254)
-++.-++.++..|.+.|-|...+-++ +.+ .-.+.|+.+++.|..| +|+-.+.
T Consensus 88 di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v--~~~~ed~-------------- 151 (370)
T 3rmj_A 88 DIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV--EFSCEDA-------------- 151 (370)
T ss_dssp HHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCE--EEEEETG--------------
T ss_pred HHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEE--EEecCCC--------------
Confidence 46666666777999998887655433 222 2335678888888764 4444211
Q ss_pred ccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhc
Q 025344 170 YVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 227 (254)
Q Consensus 170 ~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~ 227 (254)
+..|++.+++.++...++||+.|- |+|..|-..+..+.++++.
T Consensus 152 ----------~r~~~~~~~~~~~~~~~~Ga~~i~-----l~DT~G~~~P~~~~~lv~~ 194 (370)
T 3rmj_A 152 ----------LRSEIDFLAEICGAVIEAGATTIN-----IPDTVGYSIPYKTEEFFRE 194 (370)
T ss_dssp ----------GGSCHHHHHHHHHHHHHHTCCEEE-----EECSSSCCCHHHHHHHHHH
T ss_pred ----------CccCHHHHHHHHHHHHHcCCCEEE-----ecCccCCcCHHHHHHHHHH
Confidence 112689999999999999998664 6888898888777776643
No 199
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=80.07 E-value=1.8 Score=40.31 Aligned_cols=46 Identities=15% Similarity=0.192 Sum_probs=36.3
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
|+++++|||++|+++- |.-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 56 LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 119 (475)
T 2z1k_A 56 LPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVF 119 (475)
T ss_dssp HHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 5677999999999973 22111 3689999999999999999877755
No 200
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=80.06 E-value=23 Score=31.47 Aligned_cols=97 Identities=20% Similarity=0.242 Sum_probs=62.2
Q ss_pred HHHHHcCCCEEEecCCcc-----cCChhHHHHHHHHHHHc----CCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 108 EDCKQVGFDTIELNVGSL-----EIPEETLLRYVRLVKSA----GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 108 ~~~k~lGF~~IEISdGti-----~i~~~~r~~lI~~~~~~----G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
+.+-+.|..+|-|=|+.. -+|.++-++-|+.+++. |.- |-++- ..|.. .. .+..
T Consensus 99 ~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~----~~i~a-------Rtda~----~~--~~g~ 161 (275)
T 2ze3_A 99 EHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVP----VFLNA-------RTDTF----LK--GHGA 161 (275)
T ss_dssp HHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSC----CEEEE-------ECCTT----TT--TCSS
T ss_pred HHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCC----eEEEE-------echhh----hc--cccc
Confidence 334458999999999873 46777777778777775 432 33320 01110 00 0000
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
......++.|++++...+||||.|.+|+- ...+++.+|.+.++
T Consensus 162 ~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~--------~~~~~~~~i~~~~~ 204 (275)
T 2ze3_A 162 TDEERLAETVRRGQAYADAGADGIFVPLA--------LQSQDIRALADALR 204 (275)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCSEEECTTC--------CCHHHHHHHHHHCS
T ss_pred cchhhHHHHHHHHHHHHHCCCCEEEECCC--------CCHHHHHHHHHhcC
Confidence 00013789999999999999999999973 23577888887776
No 201
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=80.05 E-value=31 Score=30.38 Aligned_cols=101 Identities=19% Similarity=0.215 Sum_probs=62.3
Q ss_pred hHHHHHHHhhcccccEEeecCccc-ccCChhHHH-----------------HHHHHHHhC-CceecCCcHHHHHHHhCCc
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH-DVYVSTGDWAEHLIRNGPS 101 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~-~l~~~~~l~-----------------eKi~l~~~~-gV~v~~Gtl~E~a~~qg~~ 101 (254)
....++++..-+.+|++=+|.=-| .+.+-..+. +-+.-.|+. ++++..=+..-.++..|
T Consensus 30 ~~~~~~~~~l~~~aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~g-- 107 (271)
T 1ujp_A 30 EGFLQAVEEVLPYADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLAWG-- 107 (271)
T ss_dssp HHHHHHHHHHGGGCSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHHHHHHHC--
T ss_pred HHHHHHHHHHHhcCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHhh--
Confidence 445555554444499999985332 122222333 334444444 33222214555566664
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (254)
+++|++.|++.|++.+=+. ++|.++..++++.++++|+..++
T Consensus 108 -~~~f~~~~~~aG~dGviv~----Dl~~ee~~~~~~~~~~~gl~~i~ 149 (271)
T 1ujp_A 108 -PERFFGLFKQAGATGVILP----DLPPDEDPGLVRLAQEIGLETVF 149 (271)
T ss_dssp -HHHHHHHHHHHTCCEEECT----TCCGGGCHHHHHHHHHHTCEEEC
T ss_pred -HHHHHHHHHHcCCCEEEec----CCCHHHHHHHHHHHHHcCCceEE
Confidence 7999999999999977775 45558888999999999887554
No 202
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=80.05 E-value=27 Score=37.06 Aligned_cols=146 Identities=8% Similarity=-0.002 Sum_probs=97.6
Q ss_pred cccEEeecCcccccCChhHHHHHHHHHHhCCcee----cCCcHHHHHHH--hCCchHHHHHHHHHHcCCCEEEecCCccc
Q 025344 53 FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV----STGDWAEHLIR--NGPSAFKEYVEDCKQVGFDTIELNVGSLE 126 (254)
Q Consensus 53 yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v----~~Gtl~E~a~~--qg~~~~~~yl~~~k~lGF~~IEISdGti~ 126 (254)
=+|.+-+-.. +-+-+.++.-++.++++|..+ +..+-||-... .+++.+-+..+.+.+.|.+.|=|.|-.--
T Consensus 658 g~d~irif~s---l~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~ 734 (1165)
T 2qf7_A 658 GIDLFRVFDC---LNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGL 734 (1165)
T ss_dssp TCCEEEEECT---TCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEETTCC
T ss_pred CcCEEEEEee---HHHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCccCC
Confidence 4777666432 344556999999999999643 22221332222 22334666667777899999999999988
Q ss_pred CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 127 IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 127 i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+.+.+-.++|+.++++ +. ..+++-+ +. |...-+-.+...++|||+.|=.=-
T Consensus 735 ~~P~~~~~lv~~l~~~-~~--~~i~~H~-Hn-------------------------d~GlAvAn~laAv~aGa~~vd~ti 785 (1165)
T 2qf7_A 735 LKPAAAKVLFKALREA-TG--LPIHFHT-HD-------------------------TSGIAAATVLAAVEAGVDAVDAAM 785 (1165)
T ss_dssp CCHHHHHHHHHHHHHH-CS--SCEEEEE-CB-------------------------TTSCHHHHHHHHHHTTCSEEEEBC
T ss_pred cCHHHHHHHHHHHHHh-cC--CeEEEEE-CC-------------------------CCCHHHHHHHHHHHhCCCEEEecc
Confidence 8898888999999884 22 2233311 11 233347788888999999653333
Q ss_pred ccccccCCCccHHHHHHHHhccCC
Q 025344 207 DDVCKHADSLRADIIAKVIGRLGL 230 (254)
Q Consensus 207 rgi~d~~g~~r~d~i~~ii~~l~~ 230 (254)
.|+=...||...+.+-..++..+.
T Consensus 786 ~GlGe~~Gn~~le~vv~~L~~~g~ 809 (1165)
T 2qf7_A 786 DALSGNTSQPCLGSIVEALSGSER 809 (1165)
T ss_dssp GGGCSBTSCCBHHHHHHHHTTSTT
T ss_pred cccCCCccchhHHHHHHHHHhcCC
Confidence 488777899988877777766654
No 203
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=79.99 E-value=11 Score=33.86 Aligned_cols=95 Identities=20% Similarity=0.224 Sum_probs=61.2
Q ss_pred HHHHHHcCCCEEEecCCcc-------------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccc
Q 025344 107 VEDCKQVGFDTIELNVGSL-------------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVAR 173 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti-------------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~ 173 (254)
.+...+.|..+|-|=|+.. -+|.++-.+-|+.+++.+- .+.|-+.- ..|.. +.
T Consensus 100 v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~--~~~~~i~a-------Rtda~----~a- 165 (295)
T 1s2w_A 100 VRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQT--DPDFCIVA-------RVEAF----IA- 165 (295)
T ss_dssp HHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCS--STTCEEEE-------EECTT----TT-
T ss_pred HHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcc--cCCcEEEE-------eehHH----hc-
Confidence 4444579999999999862 2677777888888887642 13333320 11110 00
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 174 APRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 174 ~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
....++.|++++...+||||.|.+|+. -...+++.+|.+.++
T Consensus 166 -------~~g~~~ai~Ra~ay~eAGAd~i~~e~~-------~~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 166 -------GWGLDEALKRAEAYRNAGADAILMHSK-------KADPSDIEAFMKAWN 207 (295)
T ss_dssp -------TCCHHHHHHHHHHHHHTTCSEEEECCC-------SSSSHHHHHHHHHHT
T ss_pred -------cccHHHHHHHHHHHHHcCCCEEEEcCC-------CCCHHHHHHHHHHcC
Confidence 113789999999999999999999962 112445555665544
No 204
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=79.90 E-value=1.7 Score=38.11 Aligned_cols=75 Identities=19% Similarity=0.238 Sum_probs=46.6
Q ss_pred hHHHHHHHHHH-cCCCEEEecCCccc-------C--ChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccc
Q 025344 102 AFKEYVEDCKQ-VGFDTIELNVGSLE-------I--PEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAY 170 (254)
Q Consensus 102 ~~~~yl~~~k~-lGF~~IEISdGti~-------i--~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~~~ 170 (254)
.+.+..+.+.+ .|||.|||+-++-. + +.+...++|+.+++. ++. +.+|-.. .
T Consensus 112 ~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~p----v~vk~~~-~------------ 174 (311)
T 1ep3_A 112 DYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVP----LYVKLSP-N------------ 174 (311)
T ss_dssp HHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSC----EEEEECS-C------------
T ss_pred HHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCC----EEEEECC-C------------
Confidence 45666667777 89999999754321 1 344457888888875 432 3444210 0
Q ss_pred cccCCCccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 171 VARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 171 ~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
..+..+.++...++|++.|++-.
T Consensus 175 -------------~~~~~~~a~~l~~~G~d~i~v~~ 197 (311)
T 1ep3_A 175 -------------VTDIVPIAKAVEAAGADGLTMIN 197 (311)
T ss_dssp -------------SSCSHHHHHHHHHTTCSEEEECC
T ss_pred -------------hHHHHHHHHHHHHcCCCEEEEeC
Confidence 01124556777899999999943
No 205
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=79.89 E-value=6.3 Score=33.63 Aligned_cols=110 Identities=14% Similarity=0.125 Sum_probs=65.2
Q ss_pred HHHHHHHhhccc-ccEEeecCccc------ccCChhHHHHHHHHHHhCCceecC----Cc----HH---HHHHHhCCchH
Q 025344 42 VLEDIFESMGQF-VDGLKFSGGSH------SLMPKPFIEEVVKRAHQHDVYVST----GD----WA---EHLIRNGPSAF 103 (254)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GT~------~l~~~~~l~eKi~l~~~~gV~v~~----Gt----l~---E~a~~qg~~~~ 103 (254)
.+++.++.+.+. +|.+=+.+... .-++.+.+++.-++++++|+.+.. +. |. +....+..+.+
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~ 110 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIM 110 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHH
Confidence 344444444332 67776655432 112455688999999999997752 11 11 11111111268
Q ss_pred HHHHHHHHHcCCCEEEecCCcc--cC-ChhH-------HHHHHHHHHHcCCcccceee
Q 025344 104 KEYVEDCKQVGFDTIELNVGSL--EI-PEET-------LLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti--~i-~~~~-------r~~lI~~~~~~G~~v~~E~g 151 (254)
++.++.|+++|.+.|=+..+.. .. ..+. ..++.+.+++.|.++.-|..
T Consensus 111 ~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~ 168 (295)
T 3cqj_A 111 RKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIM 168 (295)
T ss_dssp HHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeC
Confidence 9999999999999998864332 11 1222 34555667788888766654
No 206
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=79.80 E-value=29 Score=29.96 Aligned_cols=46 Identities=20% Similarity=0.063 Sum_probs=40.9
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
..+++++|.++|-|--.--.+...+-.+.++.+.+.||.|+-|+|=
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge 126 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSNN 126 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 7889999999999977765577777889999999999999999986
No 207
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=79.80 E-value=19 Score=29.66 Aligned_cols=121 Identities=13% Similarity=0.209 Sum_probs=70.6
Q ss_pred hHHHHHHHhhcccccEEeecCcccccCCh-hHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPK-PFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~~l~~~-~~l~eKi~l~~~~--gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~ 117 (254)
.+++.+++.-+ |++=++ +.++.++ ..+.+-++.+|++ |..+..+. ...++ ...+.+.|.+.
T Consensus 79 ~~i~~~~~~Ga---d~v~l~--~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~----------~t~~e-~~~~~~~G~d~ 142 (223)
T 1y0e_A 79 KEVDELIESQC---EVIALD--ATLQQRPKETLDELVSYIRTHAPNVEIMADI----------ATVEE-AKNAARLGFDY 142 (223)
T ss_dssp HHHHHHHHHTC---SEEEEE--CSCSCCSSSCHHHHHHHHHHHCTTSEEEEEC----------SSHHH-HHHHHHTTCSE
T ss_pred HHHHHHHhCCC---CEEEEe--eecccCcccCHHHHHHHHHHhCCCceEEecC----------CCHHH-HHHHHHcCCCE
Confidence 45666655444 555554 3444432 3578888888888 87665431 12333 33478899999
Q ss_pred EEecCC-cc----cCC-hhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHH
Q 025344 118 IELNVG-SL----EIP-EETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRR 190 (254)
Q Consensus 118 IEISdG-ti----~i~-~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~ 190 (254)
|=++.. +. ... .....++++.+++. +..+...=|+ .+ .+.
T Consensus 143 i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI-----------------------------~~----~~~ 189 (223)
T 1y0e_A 143 IGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNV-----------------------------IT----PDM 189 (223)
T ss_dssp EECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSC-----------------------------CS----HHH
T ss_pred EEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCC-----------------------------CC----HHH
Confidence 987753 21 111 23345677777663 2222222222 12 566
Q ss_pred HHHHHHcCCcEEEEecccccc
Q 025344 191 AERCLEAGADMIMIDSDDVCK 211 (254)
Q Consensus 191 ~~~dLeAGA~~ViiEargi~d 211 (254)
+++.+++||+.|++ ++.+++
T Consensus 190 ~~~~~~~Gad~v~v-G~al~~ 209 (223)
T 1y0e_A 190 YKRVMDLGVHCSVV-GGAITR 209 (223)
T ss_dssp HHHHHHTTCSEEEE-CHHHHC
T ss_pred HHHHHHcCCCEEEE-ChHHcC
Confidence 77778899999999 566776
No 208
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=79.63 E-value=2.2 Score=39.15 Aligned_cols=106 Identities=23% Similarity=0.345 Sum_probs=59.0
Q ss_pred ChhHHHHHHHHHHhC---C----ceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----CChhHHHHH
Q 025344 68 PKPFIEEVVKRAHQH---D----VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-----IPEETLLRY 135 (254)
Q Consensus 68 ~~~~l~eKi~l~~~~---g----V~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~-----i~~~~r~~l 135 (254)
....+.|.|+-.++. + |++++.+|.+--+. .+..-++.+.+.+. .++|+||.|... .++....++
T Consensus 192 R~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~--~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~ 268 (343)
T 3kru_A 192 RARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGIN--IDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKY 268 (343)
T ss_dssp HTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCC--HHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHH
T ss_pred HHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCcc--HHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehH
Confidence 345678888888765 3 35566445431000 01234455666677 999999877542 233334566
Q ss_pred HHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcC-CcEEEEecccc
Q 025344 136 VRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDV 209 (254)
Q Consensus 136 I~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAG-A~~ViiEargi 209 (254)
++.+++. +++. .--.| .+. | .+.+++.|++| ||.|++ +|++
T Consensus 269 ~~~ir~~-------~~iP--Vi~~G--------gi~-----------t----~e~Ae~~l~~G~aD~V~i-GR~~ 310 (343)
T 3kru_A 269 AETIKKR-------CNIK--TSAVG--------LIT-----------T----QELAEEILSNERADLVAL-GREL 310 (343)
T ss_dssp HHHHHHH-------HTCE--EEEES--------SCC-----------C----HHHHHHHHHTTSCSEEEE-SHHH
T ss_pred HHHHHHh-------cCcc--cceee--------eee-----------H----HHHHHHHHhchhhHHHHH-HHHH
Confidence 6666663 2211 00001 111 2 46778889999 999988 5544
No 209
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=79.55 E-value=1.8 Score=39.55 Aligned_cols=49 Identities=12% Similarity=0.189 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCCCEEEecCCcc--------------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 104 KEYVEDCKQVGFDTIELNVGSL--------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti--------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
++-.++++++||++|+||=-+= .| +.++..+||+.+.++|++|+-.+-.
T Consensus 26 ~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 26 LECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp HHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 4555667899999999983211 11 3678999999999999999866544
No 210
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=79.55 E-value=7.7 Score=32.87 Aligned_cols=110 Identities=11% Similarity=0.157 Sum_probs=67.3
Q ss_pred HHHHHHHhhccc-ccEEeecCcccccCChhHHHHHHHHHHhCCceecCC-c------HH---HHHHHhCCchHHHHHHHH
Q 025344 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-D------WA---EHLIRNGPSAFKEYVEDC 110 (254)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~G-t------l~---E~a~~qg~~~~~~yl~~~ 110 (254)
.+++.++.+.+. .|.+=+......-+....+++.-++++++|+.+... + |. +....+..+.+++.++.|
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a 97 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRL 97 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 356666666555 677777654322345667999999999999976542 1 11 111111112688899999
Q ss_pred HHcCCCEEEe--cCCcc-----cCCh-h-------HHHHHHHHHHHcCCcccceee
Q 025344 111 KQVGFDTIEL--NVGSL-----EIPE-E-------TLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 111 k~lGF~~IEI--SdGti-----~i~~-~-------~r~~lI~~~~~~G~~v~~E~g 151 (254)
+++|.+.|=+ ..|.- ..+. + ...++.+.+++.|.++.-|-.
T Consensus 98 ~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~ 153 (294)
T 3vni_A 98 YKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVL 153 (294)
T ss_dssp HHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 9999999963 33321 1222 2 233455677788888776654
No 211
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=79.50 E-value=11 Score=31.37 Aligned_cols=131 Identities=18% Similarity=0.211 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc-CCcccceeeeecCCC--CCCCccccccccccccCCCcc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKS--DIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s--~v~~~~d~~~~~~~~~~~~~~ 178 (254)
.+++.++.++++||+ ||+.-....++... ++-+..+.. | . +..-.+.. .+.+ .|+.
T Consensus 11 ~l~~~l~~~~~~G~~-vEl~~~~~~~~~~~--~~~~~~~~~~~-~----~~~h~~~~~~~l~~-~~~~------------ 69 (254)
T 3ayv_A 11 RAEEALPRLQALGLG-AEVYLDPALLEEDA--LFQSLRRRFSG-K----LSVHLPFWNLDLLS-PDPE------------ 69 (254)
T ss_dssp GHHHHHHHHHHHTCE-EEEECCGGGTTCHH--HHHHHHHHCCS-C----EEEECCCTTCCTTC-SSHH------------
T ss_pred HHHHHHHHHHhcCCC-EEEeccccccCcHH--HHHHHHHHhCC-C----eEEecCccCCCCCC-CCHH------------
Confidence 688999999999999 99965544444442 222223333 3 2 22211110 1110 1110
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEeccccccc-----CCCcc--HHHHHH---HHhccCCCceEEecC---CchhHHH
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKH-----ADSLR--ADIIAK---VIGRLGLEKTMFEAT---NPRTSEW 245 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~-----~g~~r--~d~i~~---ii~~l~~~klifEAP---~k~qQ~~ 245 (254)
......+.+.+.++..-+.||..|++-+-..... ...++ .+.+.+ .++..|+ +|.+|.- .+.+-..
T Consensus 70 ~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lEn~~~~~~~~~~~ 148 (254)
T 3ayv_A 70 VRGLTLRRLLFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGV-RLLLENSHEPHPEALRP 148 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTC-EEEEECSSCSSGGGTHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCC-EEEEcCCCCCCHHHHHH
Confidence 0012245566667777789999998865321111 00010 111222 2233344 5777753 3456667
Q ss_pred HHHHhCCCC
Q 025344 246 FIRRYGPKV 254 (254)
Q Consensus 246 ~I~~~Gp~V 254 (254)
++++.+|+|
T Consensus 149 l~~~v~~~v 157 (254)
T 3ayv_A 149 VLEAHAGEL 157 (254)
T ss_dssp HHHHHTTSS
T ss_pred HHHhcCcCE
Confidence 888877554
No 212
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=79.43 E-value=26 Score=29.24 Aligned_cols=169 Identities=15% Similarity=0.135 Sum_probs=91.0
Q ss_pred CCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCC----hhHHHHHHHHHHhCCceecC--C-cHH--
Q 025344 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMP----KPFIEEVVKRAHQHDVYVST--G-DWA-- 92 (254)
Q Consensus 22 R~~GlT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~----~~~l~eKi~l~~~~gV~v~~--G-tl~-- 92 (254)
+..|++.++..+. .+...+.+++.+..|=++ ..+.|-+.... ++.+++.-+++....+.-.. | .+.
T Consensus 29 ~~~Gv~~~v~~~~----~~~~~~~~~~l~~~~~~i-~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~iGE~Gld~~~~ 103 (264)
T 1xwy_A 29 FDAGVNGLLITGT----NLRESQQAQKLARQYSSC-WSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRN 103 (264)
T ss_dssp HHTTCCEEEECCC----SHHHHHHHHHHHHHSTTE-EEEECCCGGGGGGCCHHHHHHHHHHHTSTTEEEEEEEEEETTTC
T ss_pred HHCCCCEEEEeCC----CHHHHHHHHHHHHhCCCE-EEEEEECCcccccCCHHHHHHHHHHhcCCCeEEEEEeccCCCCC
Confidence 4579999999886 456778888888887664 34455433222 22355555555433332110 2 110
Q ss_pred -H-HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceee-eecCCCCCCCcccccccc
Q 025344 93 -E-HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFA-VMFNKSDIPSDRDRAFGA 169 (254)
Q Consensus 93 -E-~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g-~k~~~s~v~~~~d~~~~~ 169 (254)
+ ...++. .|...++.|+++|...+==+.. ..+ ++++.+++.+.. ..+ +- ++
T Consensus 104 ~~~~~~q~~--~f~~~l~~a~~~~lpv~iH~~~----a~~---~~~~il~~~~~~---~~~~v~--H~------------ 157 (264)
T 1xwy_A 104 FSTPEEQER--AFVAQLRIAADLNMPVFMHCRD----AHE---RFMTLLEPWLDK---LPGAVL--HC------------ 157 (264)
T ss_dssp SSCHHHHHH--HHHHHHHHHHHHTCCEEEEEES----CHH---HHHHHHGGGGGG---SSCEEE--CS------------
T ss_pred CCcHHHHHH--HHHHHHHHHHHhCCcEEEEcCC----chH---HHHHHHHhcCCC---CCcEEE--Ec------------
Confidence 1 122222 5888999999999987633322 122 344555553311 111 11 10
Q ss_pred ccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceEEecCCc
Q 025344 170 YVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (254)
Q Consensus 170 ~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~klifEAP~k 240 (254)
.+ .+ .+.+++.++.|.+.=+ .|.... .-+.+.+.++++.+|++|||||..-|
T Consensus 158 -~~---------g~----~~~~~~~~~~g~yi~~---~g~~~~--~~~~~~l~~~~~~~~~drll~eTD~P 209 (264)
T 1xwy_A 158 -FT---------GT----REEMQACVAHGIYIGI---TGWVCD--ERRGLELRELLPLIPAEKLLIETDAP 209 (264)
T ss_dssp -CC---------CC----HHHHHHHHHTTCEEEE---CGGGGC--TTTSHHHHHHGGGSCGGGEEECCCTT
T ss_pred -cC---------CC----HHHHHHHHHCCeEEEE---CccccC--CcCcHHHHHHHHhCCHHHEEEecCCC
Confidence 00 01 3455666777754332 243210 01245677899999999999998654
No 213
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=79.39 E-value=3.4 Score=36.24 Aligned_cols=83 Identities=23% Similarity=0.283 Sum_probs=59.0
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHH
Q 025344 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~ 186 (254)
+.+++.+|-|+|=+-.-.++ ++..++++.+++.|+.++.|+.-
T Consensus 121 i~~a~~~GAD~VlL~~~~l~---~~l~~l~~~a~~lGl~~lvev~~---------------------------------- 163 (254)
T 1vc4_A 121 LEEARAFGASAALLIVALLG---ELTGAYLEEARRLGLEALVEVHT---------------------------------- 163 (254)
T ss_dssp HHHHHHTTCSEEEEEHHHHG---GGHHHHHHHHHHHTCEEEEEECS----------------------------------
T ss_pred HHHHHHcCCCEEEECccchH---HHHHHHHHHHHHCCCeEEEEECC----------------------------------
Confidence 56689999999998766555 67779999999988887754432
Q ss_pred HHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 187 LIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 187 ~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
.+++++.+++|+++|=+..|.+.+- .+.-+...++...++
T Consensus 164 -~~E~~~a~~~gad~IGvn~~~l~~~--~~dl~~~~~L~~~i~ 203 (254)
T 1vc4_A 164 -ERELEIALEAGAEVLGINNRDLATL--HINLETAPRLGRLAR 203 (254)
T ss_dssp -HHHHHHHHHHTCSEEEEESBCTTTC--CBCTTHHHHHHHHHH
T ss_pred -HHHHHHHHHcCCCEEEEccccCcCC--CCCHHHHHHHHHhCc
Confidence 2345577889999999999875432 334455556666554
No 214
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=79.31 E-value=4 Score=36.08 Aligned_cols=40 Identities=23% Similarity=0.316 Sum_probs=33.2
Q ss_pred HHHHHHHHcCCcEEEEecc-----cccccCCCccHHHHHHHHhcc
Q 025344 189 RRAERCLEAGADMIMIDSD-----DVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 189 ~~~~~dLeAGA~~ViiEar-----gi~d~~g~~r~d~i~~ii~~l 228 (254)
..++...++||+=||||.- -+.|..-.+..+.+.++++.+
T Consensus 211 ~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i 255 (262)
T 1zco_A 211 PLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKEL 255 (262)
T ss_dssp HHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHH
Confidence 3356678999999999984 567999999999999998754
No 215
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=78.93 E-value=5.3 Score=34.57 Aligned_cols=131 Identities=17% Similarity=0.240 Sum_probs=70.8
Q ss_pred HHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCce----ecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 025344 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVY----VSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (254)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~----v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~ 117 (254)
+++.+.+.-+++|-+. .-+ +.+ .+.+-++.+|++|+. +.|+|-.|.. ++|++ +.|.
T Consensus 72 ~i~~~~~aGAd~itvh---~Ea--~~~--~~~~~i~~i~~~G~k~gv~lnp~tp~~~~--------~~~l~-----~~D~ 131 (231)
T 3ctl_A 72 YIAQLARAGADFITLH---PET--ING--QAFRLIDEIRRHDMKVGLILNPETPVEAM--------KYYIH-----KADK 131 (231)
T ss_dssp THHHHHHHTCSEEEEC---GGG--CTT--THHHHHHHHHHTTCEEEEEECTTCCGGGG--------TTTGG-----GCSE
T ss_pred HHHHHHHcCCCEEEEC---ccc--CCc--cHHHHHHHHHHcCCeEEEEEECCCcHHHH--------HHHHh-----cCCE
Confidence 6677777666666543 111 011 378999999999986 6678765533 23332 4666
Q ss_pred EE---ecCCccc---CC-hhHHHHHHHHHH-HcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHH
Q 025344 118 IE---LNVGSLE---IP-EETLLRYVRLVK-SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (254)
Q Consensus 118 IE---ISdGti~---i~-~~~r~~lI~~~~-~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~ 189 (254)
|- +.-|+-- ++ .-+|.+-++... +.|+.+. +.+-.+ ++ .+
T Consensus 132 VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~--I~VdGG---------------I~---------------~~ 179 (231)
T 3ctl_A 132 ITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYE--IEVDGS---------------CN---------------QA 179 (231)
T ss_dssp EEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCE--EEEESC---------------CS---------------TT
T ss_pred EEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCce--EEEECC---------------cC---------------HH
Confidence 65 3333321 21 223333344333 3444322 333211 11 34
Q ss_pred HHHHHHHcCCcEEEEecccccccCCCccHHHHHHHH
Q 025344 190 RAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVI 225 (254)
Q Consensus 190 ~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii 225 (254)
.+...++||||.+++=.+.||.+... ..+.++++-
T Consensus 180 ~~~~~~~aGAd~~V~G~saif~~~d~-~~~~~~~l~ 214 (231)
T 3ctl_A 180 TYEKLMAAGADVFIVGTSGLFNHAEN-IDEAWRIMT 214 (231)
T ss_dssp THHHHHHHTCCEEEECTTTTGGGCSS-HHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEccHHHhCCCCc-HHHHHHHHH
Confidence 56677999999998854789975432 234455443
No 216
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=78.93 E-value=6.6 Score=36.22 Aligned_cols=67 Identities=18% Similarity=0.236 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~ 179 (254)
...+.++.+.+.|++.|+|+-+. . .++...++|+.+++. ++.|.. +. + .
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~-g-~~~~~~e~i~~ir~~~~~~pviv----~~----v-----------~-------- 203 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAH-G-HSTRIIELIKKIKTKYPNLDLIA----GN----I-----------V-------- 203 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC-C-SSHHHHHHHHHHHHHCTTCEEEE----EE----E-----------C--------
T ss_pred hHHHHHHHHHHCCCCEEEEeCCC-C-ChHHHHHHHHHHHHHCCCCeEEE----cC----C-----------C--------
Confidence 34566778888999999994322 1 235556788888886 444432 10 0 0
Q ss_pred cccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 180 YVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 180 ~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
+ .+.++...++|||.|++
T Consensus 204 ---~----~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 204 ---T----KEAALDLISVGADCLKV 221 (404)
T ss_dssp ---S----HHHHHHHHTTTCSEEEE
T ss_pred ---c----HHHHHHHHhcCCCEEEE
Confidence 1 56778888999999999
No 217
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=78.81 E-value=4.6 Score=36.72 Aligned_cols=47 Identities=15% Similarity=0.237 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-----cCC--hhHHHHHHHHHHHcCCcccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL-----EIP--EETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-----~i~--~~~r~~lI~~~~~~G~~v~~ 148 (254)
.+.+.++.++++||++||+....+ ..+ .++..++-+.+++.|+++..
T Consensus 34 ~~~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (386)
T 1muw_A 34 DPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPM 87 (386)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCE
T ss_pred CHHHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEE
Confidence 378889999999999999985322 111 35677888889999998765
No 218
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=78.78 E-value=11 Score=34.82 Aligned_cols=82 Identities=24% Similarity=0.301 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHcC--CCEEEecCCcccCC-------hhHHHHHHHHHHHc--CCc--ccceeeeecCCCCCCCccccccc
Q 025344 102 AFKEYVEDCKQVG--FDTIELNVGSLEIP-------EETLLRYVRLVKSA--GLK--AKPKFAVMFNKSDIPSDRDRAFG 168 (254)
Q Consensus 102 ~~~~yl~~~k~lG--F~~IEISdGti~i~-------~~~r~~lI~~~~~~--G~~--v~~E~g~k~~~s~v~~~~d~~~~ 168 (254)
..++|.+.++.++ .|+|||+-|+=..+ .+.-.++++.+++. -+. +..=+.+|-
T Consensus 162 ~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi-------------- 227 (367)
T 3zwt_A 162 AAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKI-------------- 227 (367)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEE--------------
T ss_pred CHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEe--------------
Confidence 7889998888887 89999998764322 34445666666542 010 111245552
Q ss_pred cccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 169 AYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 169 ~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
+| .| |.+++.+.++...++|||.|++=.+
T Consensus 228 ---~p-~~------~~~~~~~ia~~~~~aGadgi~v~nt 256 (367)
T 3zwt_A 228 ---AP-DL------TSQDKEDIASVVKELGIDGLIVTNT 256 (367)
T ss_dssp ---CS-CC------CHHHHHHHHHHHHHHTCCEEEECCC
T ss_pred ---CC-CC------CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 11 11 3567888999999999999998765
No 219
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=78.50 E-value=16 Score=32.93 Aligned_cols=66 Identities=14% Similarity=0.210 Sum_probs=42.5
Q ss_pred HHHHHHHhhc-ccccEEeecCcccccCChhHHHHHHHHHHhCCceecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 025344 42 VLEDIFESMG-QFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (254)
Q Consensus 42 ~~~DlLe~ag-~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~-Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~I 118 (254)
..-.+|..+| +-|-|.=.++ +-..+.++...+-|-++|+.+-| ||. +-+.|.+-++.|.+.|..-|
T Consensus 172 tAiaml~dmG~~SvKffPM~G----l~~leEl~avAkAca~~g~~lEPTGGI-------dl~Nf~~I~~i~l~aGv~~v 239 (275)
T 3m6y_A 172 TAIALVRDMGGNSLKYFPMKG----LAHEEEYRAVAKACAEEGFALEPTGGI-------DKENFETIVRIALEANVEQV 239 (275)
T ss_dssp HHHHHHHHHTCCEEEECCCTT----TTTHHHHHHHHHHHHHHTCEEEEBSSC-------CTTTHHHHHHHHHHTTCSCB
T ss_pred HHHHHHHHcCCCeeeEeecCC----cccHHHHHHHHHHHHHcCceECCCCCc-------cHhHHHHHHHHHHHcCCCee
Confidence 3445555554 3333333343 34446688888999999997666 762 12378888899999998754
No 220
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=78.43 E-value=7.3 Score=36.05 Aligned_cols=25 Identities=8% Similarity=0.017 Sum_probs=20.7
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
+.++.++.++..-++|+++|-+=++
T Consensus 253 ~~~~~~~la~~le~~Gvd~i~v~~~ 277 (377)
T 2r14_A 253 PEAMAFYLAGELDRRGLAYLHFNEP 277 (377)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 4677888888888999999988654
No 221
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=78.37 E-value=10 Score=33.21 Aligned_cols=176 Identities=13% Similarity=0.072 Sum_probs=99.8
Q ss_pred CCCCceeEecCCCCCCc------chhHHHHHHHh----hcccccEEeecCcccccCChhHHHHHHHHHHhCCceecC--C
Q 025344 22 RRFGVTEMRSPHYTLSS------SHNVLEDIFES----MGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST--G 89 (254)
Q Consensus 22 R~~GlT~V~DkG~~~~~------g~~~~~DlLe~----ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~--G 89 (254)
+..|++-++-+|.++.+ ....++.+++. +..|=+.+..+.|-+...-.+...+-++.+.+..|..-. |
T Consensus 21 ~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~~~vvaIGEiG 100 (261)
T 3guw_A 21 KENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGIHPRCIPPDYEFVLGYLEEGEWVAFGEIG 100 (261)
T ss_dssp HTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTTCEECCBCCCCGGGCCTTTHHHHHHHTTSCCSCEEEEE
T ss_pred HHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCCCCEEEEEEECcccccccHHHHHHHhCcCCeEEEEEec
Confidence 56799999999976520 01345566643 667766788888877655444466667777764432211 3
Q ss_pred -cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccc
Q 025344 90 -DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFG 168 (254)
Q Consensus 90 -tl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~ 168 (254)
.+. .-.++. .|...++.++++|...+==+-... ..+.-.++++.+++.|+.... +++- .
T Consensus 101 LD~~-~~~Q~~--~f~~ql~lA~e~~lPv~iH~r~~~--~~~a~~~~~~il~~~~~~~~~-~vi~--H------------ 160 (261)
T 3guw_A 101 LELV-TDEEIE--VLKSQLELAKRMDVPCIIHTPRGN--KLKATRKTLEILESLDFPADL-AVID--H------------ 160 (261)
T ss_dssp CSSC-CHHHHH--HHHHHHHHHHHHTCCEEEECCSSS--TTHHHHHHHHHHHHTTCCTTS-EEEE--S------------
T ss_pred CCCC-hHHHHH--HHHHHHHHHHHhCCeEEEEcCCCc--ccchHHHHHHHHHHcCCCCCC-EEEE--e------------
Confidence 222 122333 699999999999998874332211 123345677777776543110 1221 1
Q ss_pred cccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccc-cccCCCccHHHHHHHHhccCCCceEEecCCch
Q 025344 169 AYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDV-CKHADSLRADIIAKVIGRLGLEKTMFEATNPR 241 (254)
Q Consensus 169 ~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi-~d~~g~~r~d~i~~ii~~l~~~klifEAP~k~ 241 (254)
+ + .+++++.++.|.+.=+-=.-|+ +.++ ..++++.+|++||++|..-|-
T Consensus 161 -----------~--~----~~~a~~~l~~G~yis~~~~pg~~t~~~-------~~~~v~~ipldrlLlETD~P~ 210 (261)
T 3guw_A 161 -----------V--N----FETLDMVLETEYWIGLTVQPGKLSAED-------AARIVAEHGPERFMLNSDAGY 210 (261)
T ss_dssp -----------C--C----TTTHHHHHTSSSEEEEECC-------C-------CTTGGGGCC-CCEEEECCCCC
T ss_pred -----------C--C----HHHHHHHHhCCEEEEecCCCCcccHHH-------HHHHHHhCCcceEEEecCCCC
Confidence 1 1 3446667888865533200132 2221 136788999999999987653
No 222
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=78.26 E-value=4.2 Score=36.17 Aligned_cols=88 Identities=11% Similarity=0.123 Sum_probs=50.8
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCc-ccceeeeecCCCCCCCccccccccccccCCCccccccC
Q 025344 105 EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVED 183 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~-v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d 183 (254)
++-+.+++.|.+.|=.| |. ..+.||.....+|. |-|=++.+ .+.. +
T Consensus 148 ~~A~~a~~~G~dGvV~s------~~--e~~~ir~~~~~~f~~vtPGIr~~--g~~~-----------------------g 194 (259)
T 3tfx_A 148 SLAKMAKHSGADGVICS------PL--EVKKLHENIGDDFLYVTPGIRPA--GNAK-----------------------D 194 (259)
T ss_dssp HHHHHHHHTTCCEEECC------GG--GHHHHHHHHCSSSEEEECCCCCC------------------------------
T ss_pred HHHHHHHHhCCCEEEEC------HH--HHHHHHhhcCCccEEEcCCcCCC--CCCc-----------------------C
Confidence 55666788898877665 32 24667777766665 34533321 1111 2
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 184 VDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 184 ~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
-+.+|-+++..++||||++++ +|.||..+.- ...+++|.+.+
T Consensus 195 DQ~Rv~T~~~a~~aGad~iVv-Gr~I~~a~dp--~~a~~~i~~~~ 236 (259)
T 3tfx_A 195 DQSRVATPKMAKEWGSSAIVV-GRPITLASDP--KAAYEAIKKEF 236 (259)
T ss_dssp ------CHHHHHHTTCSEEEE-CHHHHTSSSH--HHHHHHHHHHH
T ss_pred CccccCCHHHHHHcCCCEEEE-ChHHhCCCCH--HHHHHHHHHHH
Confidence 344577788889999998666 7999988753 34555555443
No 223
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=78.23 E-value=11 Score=31.64 Aligned_cols=95 Identities=20% Similarity=0.256 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLE-IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~-i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~ 180 (254)
...++.+.+.+.|.++|.++|..-. .....-.++++.+++. +++..-. . +. +
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-------~~iPvi~------~----Gg-i--------- 84 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAER-------VFIPLTV------G----GG-V--------- 84 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTT-------CCSCEEE------E----SS-C---------
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHh-------CCCCEEE------E----CC-c---------
Confidence 4667778888999999999976533 2344455777777763 2221000 0 00 1
Q ss_pred ccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceE
Q 025344 181 VEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 234 (254)
Q Consensus 181 ~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~kli 234 (254)
.+ .++++..+++||+.|++=..-+-+ .+.+.++.+.++.++++
T Consensus 85 -~~----~~~~~~~~~~Gad~V~lg~~~l~~------p~~~~~~~~~~~~~~i~ 127 (252)
T 1ka9_F 85 -RS----LEDARKLLLSGADKVSVNSAAVRR------PELIRELADHFGAQAVV 127 (252)
T ss_dssp -CS----HHHHHHHHHHTCSEEEECHHHHHC------THHHHHHHHHHCGGGEE
T ss_pred -CC----HHHHHHHHHcCCCEEEEChHHHhC------cHHHHHHHHHcCCCcEE
Confidence 12 467888889999999995542222 35677787777766543
No 224
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=78.13 E-value=2.3 Score=42.31 Aligned_cols=52 Identities=19% Similarity=0.405 Sum_probs=41.4
Q ss_pred CchHHHHHHHHHHcCCCEEEec---------CCcccCCh-hHHHHHHHHHHHcCCcccceee
Q 025344 100 PSAFKEYVEDCKQVGFDTIELN---------VGSLEIPE-ETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEIS---------dGti~i~~-~~r~~lI~~~~~~G~~v~~E~g 151 (254)
++..++-++.+|++||++|.++ .|..+.+- ++..++|+.|+++||+|+-+.+
T Consensus 36 ~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~g 97 (612)
T 3d3a_A 36 KEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIVRPG 97 (612)
T ss_dssp GGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEEEecC
Confidence 4588899999999999999998 55555443 2335779999999999998876
No 225
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=78.08 E-value=7.3 Score=37.09 Aligned_cols=65 Identities=23% Similarity=0.273 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHcCCCEEEe--cCCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCc
Q 025344 102 AFKEYVEDCKQVGFDTIEL--NVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEI--SdGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~ 177 (254)
...+.++.+.+.|++.|+| +.|.. +...++|+.+++. ++.|.. + ++ .
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~----~~~~~~i~~i~~~~~~~pvi~----~----~v-----------~------ 305 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNS----VYQIAMVHYIKQKYPHLQVIG----G----NV-----------V------ 305 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCS----HHHHHHHHHHHHHCTTCEEEE----E----EE-----------C------
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcc----hhHHHHHHHHHHhCCCCceEe----c----cc-----------c------
Confidence 3567778889999999999 44432 3345788888886 444332 1 01 1
Q ss_pred cccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 178 TEYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 178 ~~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
+ .+.+++..++||+.|++
T Consensus 306 -----t----~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 306 -----T----AAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp -----S----HHHHHHHHHHTCSEEEE
T ss_pred -----h----HHHHHHHHHcCCCEEEE
Confidence 1 56688889999999999
No 226
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=77.96 E-value=13 Score=33.20 Aligned_cols=35 Identities=14% Similarity=0.249 Sum_probs=21.5
Q ss_pred HHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHH
Q 025344 188 IRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVI 225 (254)
Q Consensus 188 i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii 225 (254)
.+.+++..++||+-|+| ++.|++... -...+.+++
T Consensus 232 ~edv~~l~~~Ga~gvLV-G~almr~~d--~~~~~~~l~ 266 (272)
T 3tsm_A 232 HEDCLRLEKSGIGTFLI-GESLMRQHD--VAAATRALL 266 (272)
T ss_dssp HHHHHHHHTTTCCEEEE-CHHHHTSSC--HHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEE-cHHHcCCcC--HHHHHHHHH
Confidence 34556668999999988 444665543 233444444
No 227
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=77.89 E-value=7.2 Score=32.27 Aligned_cols=41 Identities=17% Similarity=0.096 Sum_probs=29.5
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccCC-hhHHHHHHHHHHH
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGSLEIP-EETLLRYVRLVKS 141 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~i~-~~~r~~lI~~~~~ 141 (254)
+...+..+.+.+.|+++|++++-.-.-+ ...-.++|+.+++
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~ 74 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAE 74 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHH
Confidence 3678889999999999999996543322 2234567777776
No 228
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=77.85 E-value=8.4 Score=33.48 Aligned_cols=68 Identities=16% Similarity=0.215 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
...+..+.|.+-|+++||| ++....-.+.|+.+++.= +..-+|. +-.++
T Consensus 26 ~a~~~a~al~~gGi~~iEv-----t~~t~~a~~~I~~l~~~~--p~~~IGA---------------GTVlt--------- 74 (217)
T 3lab_A 26 HAIPMAKALVAGGVHLLEV-----TLRTEAGLAAISAIKKAV--PEAIVGA---------------GTVCT--------- 74 (217)
T ss_dssp GHHHHHHHHHHTTCCEEEE-----ETTSTTHHHHHHHHHHHC--TTSEEEE---------------ECCCS---------
T ss_pred HHHHHHHHHHHcCCCEEEE-----eCCCccHHHHHHHHHHHC--CCCeEee---------------ccccC---------
Confidence 3455567777889999999 344456778999888731 1112222 11133
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
.++++..++|||++|+.=+
T Consensus 75 ------~~~a~~ai~AGA~fivsP~ 93 (217)
T 3lab_A 75 ------ADDFQKAIDAGAQFIVSPG 93 (217)
T ss_dssp ------HHHHHHHHHHTCSEEEESS
T ss_pred ------HHHHHHHHHcCCCEEEeCC
Confidence 7889999999999998754
No 229
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=77.77 E-value=12 Score=34.00 Aligned_cols=95 Identities=21% Similarity=0.159 Sum_probs=64.7
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccC------------ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSLEI------------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAY 170 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i------------~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~ 170 (254)
++.-++.++..|.+.|-|...+-++ ..+.-.+.|+.+++.|..| +|+-.+.
T Consensus 83 i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v--~f~~~d~--------------- 145 (325)
T 3eeg_A 83 INIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEV--EFFCEDA--------------- 145 (325)
T ss_dssp HHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEE--EEEEETG---------------
T ss_pred HHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEE--EEEcccc---------------
Confidence 4444445555699988875443322 2233457899999999875 4554211
Q ss_pred cccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 171 VARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 171 ~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
+..|++.+++.+++..++||+.| .|+|..|-..+..+.++++.+
T Consensus 146 ---------~~~~~~~~~~~~~~~~~~G~~~i-----~l~DT~G~~~P~~v~~lv~~l 189 (325)
T 3eeg_A 146 ---------GRADQAFLARMVEAVIEAGADVV-----NIPDTTGYMLPWQYGERIKYL 189 (325)
T ss_dssp ---------GGSCHHHHHHHHHHHHHHTCSEE-----ECCBSSSCCCHHHHHHHHHHH
T ss_pred ---------ccchHHHHHHHHHHHHhcCCCEE-----EecCccCCcCHHHHHHHHHHH
Confidence 11258999999999999999865 478888988888777776543
No 230
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=77.68 E-value=6.4 Score=32.23 Aligned_cols=86 Identities=12% Similarity=0.076 Sum_probs=55.0
Q ss_pred chhHHHHHHHhhccc-ccEEeecCcccccCChhHHHHHHHHHHhC---CceecCCcHHHHHHHhCCchHHHHHHHHHHcC
Q 025344 39 SHNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQH---DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVG 114 (254)
Q Consensus 39 g~~~~~DlLe~ag~y-ID~lKfg~GT~~l~~~~~l~eKi~l~~~~---gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lG 114 (254)
.+....++.+.+-++ +|++-+.+++.. ..+-++.+|+. ++.+-.|+- . ..++ .+.+.+.|
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~------~~~~i~~ir~~~~~~~~ig~~~v------~---~~~~-~~~a~~~G 83 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPD------ADTVIKELSFLKEKGAIIGAGTV------T---SVEQ-CRKAVESG 83 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTT------HHHHHHHTHHHHHTTCEEEEESC------C---SHHH-HHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChh------HHHHHHHHHHHCCCCcEEEeccc------C---CHHH-HHHHHHcC
Confidence 345666666666665 899988877632 12224444432 444433331 1 2333 46777899
Q ss_pred CCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 025344 115 FDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 115 F~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (254)
.|+| ++.++- .++++.+++.|..+++
T Consensus 84 ad~i-v~~~~~-------~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 84 AEFI-VSPHLD-------EEISQFCKEKGVFYMP 109 (205)
T ss_dssp CSEE-ECSSCC-------HHHHHHHHHHTCEEEC
T ss_pred CCEE-EcCCCC-------HHHHHHHHHcCCcEEC
Confidence 9999 998864 3688899999999888
No 231
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=77.62 E-value=12 Score=33.02 Aligned_cols=101 Identities=13% Similarity=0.098 Sum_probs=68.4
Q ss_pred HHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhC-CceecCCc----HHHHHHHh--CC----------chHH
Q 025344 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGD----WAEHLIRN--GP----------SAFK 104 (254)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~-gV~v~~Gt----l~E~a~~q--g~----------~~~~ 104 (254)
..+.+++.-+++|| +|+|...+-+++.+++.+...++. +++++--| -+|.|+.. |. +.++
T Consensus 30 ~a~~~v~~GAdiID---Ig~g~~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iINdvs~~~d~~~ 106 (262)
T 1f6y_A 30 WARRQEEGGARALD---LNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMINSTNAEREKVE 106 (262)
T ss_dssp HHHHHHHHTCSEEE---EBCC----CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEEEEECSCHHHHH
T ss_pred HHHHHHHCCCcEEE---ECCCCCCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEEEECCCCcccHH
Confidence 34555665565555 588988888999999999999987 88888765 48888876 51 2244
Q ss_pred HHHHHHHHcCCCEEEecCCc--ccCChhHH----HHHHHHHHHcCCc
Q 025344 105 EYVEDCKQVGFDTIELNVGS--LEIPEETL----LRYVRLVKSAGLK 145 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGt--i~i~~~~r----~~lI~~~~~~G~~ 145 (254)
+.+..++++|...|=....- +.-+-+++ .++++++.+.|+.
T Consensus 107 ~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~ 153 (262)
T 1f6y_A 107 KLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLP 153 (262)
T ss_dssp HHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 78999999999888876421 22222333 5678888888874
No 232
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=77.61 E-value=2.3 Score=41.17 Aligned_cols=46 Identities=15% Similarity=0.147 Sum_probs=36.3
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
|+++++|||++|+++= |.-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 182 LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 245 (588)
T 1j0h_A 182 LDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVF 245 (588)
T ss_dssp HHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5788999999999982 22111 2689999999999999999877654
No 233
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=77.51 E-value=4.6 Score=36.55 Aligned_cols=147 Identities=14% Similarity=0.218 Sum_probs=78.5
Q ss_pred hcccccEEeecCcccccCChhHHHHHHHHHHhCCc--eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe-cCCccc
Q 025344 50 MGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV--YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL-NVGSLE 126 (254)
Q Consensus 50 ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV--~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEI-SdGti~ 126 (254)
..+|+|++|+|-+. +.+.+.|++ +. +.|. .+..|... .++.+..-++++++-|-+-|=+ --|+ +
T Consensus 107 l~~~vd~lqIgA~~--~~n~~LLr~-va---~~gkPVilK~G~~~------t~~ei~~ave~i~~~Gn~~i~L~erg~-~ 173 (285)
T 3sz8_A 107 VAEIADVLQVPAFL--ARQTDLVVA-IA---KAGKPVNVKKPQFM------SPTQLKHVVSKCGEVGNDRVMLCERGS-S 173 (285)
T ss_dssp HHTTCSEEEECGGG--TTCHHHHHH-HH---HTSSCEEEECCTTS------CGGGTHHHHHHHHHTTCCCEEEEECCE-E
T ss_pred HHHhCCEEEECccc--cCCHHHHHH-HH---ccCCcEEEeCCCCC------CHHHHHHHHHHHHHcCCCcEEEEeCCC-C
Confidence 45789999998654 444444444 33 3455 44457430 0112334445556666553333 2233 2
Q ss_pred CChhH---HHHHHHHHHHc--CCcccceeeeecCCCCC---CCccccccccccccCCCccccccCHHHHHHHHHHHHHcC
Q 025344 127 IPEET---LLRYVRLVKSA--GLKAKPKFAVMFNKSDI---PSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG 198 (254)
Q Consensus 127 i~~~~---r~~lI~~~~~~--G~~v~~E~g~k~~~s~v---~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAG 198 (254)
-+..+ -++.|..+++. |+.| +. ++.+.+ |..+.. + .-..+.++..+...+++|
T Consensus 174 y~~~~~~vdl~~i~~lk~~~~~~pV----~~-D~sHs~q~p~~~~~~------s--------~G~r~~v~~~a~AAvA~G 234 (285)
T 3sz8_A 174 FGYDNLVVDMLGFRQMAETTGGCPV----IF-DVTHSLQCRDPLGDA------S--------GGRRRQVLDLARAGIAVG 234 (285)
T ss_dssp CSSSCEECCTTHHHHHHHHTTSCCE----EE-ETTTTCC-----------------------------HHHHHHHHHHHC
T ss_pred CCCCcCccCHHHHHHHHHhCCCCCE----EE-eCCCccccCCCcCCC------C--------CCchhhHHHHHHHHHHhC
Confidence 22222 14566667765 4443 22 111111 000000 0 001345577889999999
Q ss_pred CcEEEEecc-----cccccCCCccHHHHHHHHhcc
Q 025344 199 ADMIMIDSD-----DVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 199 A~~ViiEar-----gi~d~~g~~r~d~i~~ii~~l 228 (254)
|+-+|||-- -++|..-.+..+.++++++.+
T Consensus 235 A~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i 269 (285)
T 3sz8_A 235 IAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQM 269 (285)
T ss_dssp CSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHH
T ss_pred CCEEEEEeccChhccCCchhhccCHHHHHHHHHHH
Confidence 999999983 677888889988888888654
No 234
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=77.50 E-value=5.5 Score=36.49 Aligned_cols=95 Identities=19% Similarity=0.221 Sum_probs=61.7
Q ss_pred HHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccc
Q 025344 105 EYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVAR 173 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~ 173 (254)
+-.+.+-+.|..+|-|=|+.. -+|.++-++-|+.+++..- .+.|-+.- ..|..
T Consensus 120 ~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~--~~~~~I~A-------Rtda~------- 183 (318)
T 1zlp_A 120 RFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIG--DSDFFLVA-------RTDAR------- 183 (318)
T ss_dssp HHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHT--TSCCEEEE-------EECTH-------
T ss_pred HHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcc--cCCcEEEE-------eeHHh-------
Confidence 334444458999999999872 3677776666666665421 12333320 11210
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 174 APRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 174 ~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
.....++.|++++...+||||.|.+|+- ...+++.+|.+.++
T Consensus 184 ------a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~--------~~~e~~~~i~~~l~ 225 (318)
T 1zlp_A 184 ------APHGLEEGIRRANLYKEAGADATFVEAP--------ANVDELKEVSAKTK 225 (318)
T ss_dssp ------HHHHHHHHHHHHHHHHHTTCSEEEECCC--------CSHHHHHHHHHHSC
T ss_pred ------hhcCHHHHHHHHHHHHHcCCCEEEEcCC--------CCHHHHHHHHHhcC
Confidence 0123689999999999999999999973 13577778887776
No 235
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=77.48 E-value=3.1 Score=38.44 Aligned_cols=131 Identities=13% Similarity=0.090 Sum_probs=74.3
Q ss_pred HHHHHHcCCCEEEecC--------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeeeecCCCCCC--------
Q 025344 107 VEDCKQVGFDTIELNV--------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIP-------- 160 (254)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~-------- 160 (254)
|+++++|||++|.+|- |.-. + +.++..++|+.+.++|++|+-.+-..+-..+-+
T Consensus 29 LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~~~~~f~~~~~~ 108 (441)
T 1lwj_A 29 VSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLPIHHTGFLHTWFQKALKG 108 (441)
T ss_dssp HHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTBCCTTCHHHHHHHTT
T ss_pred hHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcccCchHHHHHHhcc
Confidence 5678999999999973 2111 1 368999999999999999986665421110000
Q ss_pred ----------Ccccccccc--cccc-CCCcc--------------------ccccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 161 ----------SDRDRAFGA--YVAR-APRST--------------------EYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 161 ----------~~~d~~~~~--~~~~-~~~~~--------------------~~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
...+..... .... ..|.. +-..-.+.+++.++..++.|+|=.-+.+=
T Consensus 109 ~~~y~d~y~~~~~~~~~~~~~~~~~~~~w~~~~~~~~y~~~f~~~~pdln~~np~V~~~l~~~~~~wl~~gvDGfR~D~~ 188 (441)
T 1lwj_A 109 DPHYRDYYVWANKETDLDERREWDGEKIWHPLEDGRFYRGLFGPFSPDLNYDNPQVFDEMKRLVLHLLDMGVDGFRFDAA 188 (441)
T ss_dssp CHHHHTTBCBCCTTSCTTCBCSSSCCBCEEECTTSCEEECTTCTTSCBBCSSSHHHHHHHHHHHHHHHTTTCCEEEETTG
T ss_pred CCCCcceeeecCCCCCCcccccCCCccccccccCCceEEcccCCCCCccCCCCHHHHHHHHHHHHHHHhCCCCEEEEeCh
Confidence 000000000 0000 11211 01112367888888899999998888885
Q ss_pred -cccccCCCccHHHHHHHHhccCCCceEEecCC
Q 025344 208 -DVCKHADSLRADIIAKVIGRLGLEKTMFEATN 239 (254)
Q Consensus 208 -gi~d~~g~~r~d~i~~ii~~l~~~klifEAP~ 239 (254)
.+.+ +..-..+.+.++.+.+... ++=|+..
T Consensus 189 ~~i~~-~~~~~~~~~~~~~~~~~~~-~igE~~~ 219 (441)
T 1lwj_A 189 KHMRD-TIEQNVRFWKYFLSDLKGI-FLAEIWA 219 (441)
T ss_dssp GGSSS-SHHHHHHHHHHHTTTCCSE-EEECCCS
T ss_pred hhhcc-CCccHHHHHHHHHHHhHhh-EEEccCC
Confidence 3442 2111345666676655432 7778765
No 236
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=77.40 E-value=12 Score=34.26 Aligned_cols=21 Identities=19% Similarity=0.207 Sum_probs=16.7
Q ss_pred HHHHHHHHHcCCcEEEEecccc
Q 025344 188 IRRAERCLEAGADMIMIDSDDV 209 (254)
Q Consensus 188 i~~~~~dLeAGA~~ViiEargi 209 (254)
.+.+++.+++|||.|++ ++|-
T Consensus 222 ~e~a~~~~~~Gad~i~v-g~Gg 242 (393)
T 2qr6_A 222 YTTALHMMRTGAVGIIV-GGGE 242 (393)
T ss_dssp HHHHHHHHTTTCSEEEE-SCCS
T ss_pred HHHHHHHHHcCCCEEEE-CCCc
Confidence 34578888999999999 7743
No 237
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=77.22 E-value=2.6 Score=39.36 Aligned_cols=47 Identities=17% Similarity=0.157 Sum_probs=36.2
Q ss_pred HHHHHHcCCCEEEecCCcc--------------cC-----ChhHHHHHHHHHHHcCCcccceeeee
Q 025344 107 VEDCKQVGFDTIELNVGSL--------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti--------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
|+++|+||+++|+++==+- .+ +.++..++|+.+.++|++|+-.+-..
T Consensus 38 LdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 103 (549)
T 4aie_A 38 LDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDLVVN 103 (549)
T ss_dssp HHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred hHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 5688999999999863211 11 35789999999999999998777553
No 238
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=77.18 E-value=2.4 Score=39.39 Aligned_cols=120 Identities=11% Similarity=0.128 Sum_probs=72.7
Q ss_pred HHHHHHHHcCCCEEEecC-------Cc-----ccC-----ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccc
Q 025344 105 EYVEDCKQVGFDTIELNV-------GS-----LEI-----PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF 167 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISd-------Gt-----i~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~ 167 (254)
+-|+++++||+++|.+|- |. ..+ +.++..++|+.+.++|++|+-.+-..+-. ..+
T Consensus 40 ~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~NH~s------~~~-- 111 (424)
T 2dh2_A 40 GRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYRG------ENS-- 111 (424)
T ss_dssp TTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCTTTTS------SST--
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECCCcCC------Ccc--
Confidence 346688999999999983 11 011 25899999999999999999887763211 111
Q ss_pred ccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCc-eEEecCCc
Q 025344 168 GAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEK-TMFEATNP 240 (254)
Q Consensus 168 ~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~k-lifEAP~k 240 (254)
++.. ....-.+.+++.++-.|+.|+|=.-+.+=+-....... -..+.++++.+..+. +|.|....
T Consensus 112 --wF~~-----q~~~Vr~~~~~~~~~Wl~~gvDGfRlD~v~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~e~~~ 177 (424)
T 2dh2_A 112 --WFST-----QVDTVATKVKDALEFWLQAGVDGFQVRDIENLKDASSF-LAEWQNITKGFSEDRLLIAGTNSS 177 (424)
T ss_dssp --TCSS-----CHHHHHHHHHHHHHHHHHHTCCEEEECCGGGSTTHHHH-HHHHHHHHHHHCTTCEEEEECSCC
T ss_pred --cccc-----cCHHHHHHHHHHHHHHHHcCCCEEEEeccccCCccHHH-HHHHHHHHHHhCCCcEEEEEEecC
Confidence 1110 00011356788888899999998888764321111001 112344556666664 46687643
No 239
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=76.96 E-value=2.6 Score=38.94 Aligned_cols=46 Identities=13% Similarity=0.039 Sum_probs=36.4
Q ss_pred HHHHHHcCCCEEEecCC---------------cccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNVG---------------SLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISdG---------------ti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
|++++++||++|.||-= .-.. +.++..++|+++.++|++|+-.+-.
T Consensus 36 l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 36 LQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp HHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 56789999999999832 2211 2488999999999999999887755
No 240
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=76.93 E-value=25 Score=31.16 Aligned_cols=96 Identities=15% Similarity=0.162 Sum_probs=56.1
Q ss_pred hHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecC-C--cHHHHHHHh--CCchHH---HHHHHHHH
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-G--DWAEHLIRN--GPSAFK---EYVEDCKQ 112 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~-G--tl~E~a~~q--g~~~~~---~yl~~~k~ 112 (254)
..+.++++..-+..+ +.+. +.+...-++.++.++++|+..++ | ++-+..+.+ ....++ +-++.+++
T Consensus 126 ~~~~~l~~~ik~~~~-i~i~-----~s~g~~~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~ 199 (350)
T 3t7v_A 126 NRFVELVQIVKEELG-LPIM-----ISPGLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQ 199 (350)
T ss_dssp HHHHHHHHHHHHHHC-SCEE-----EECSSCCHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcC-ceEE-----EeCCCCCHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 455666665543222 2221 22223356788999999996544 4 443333322 112344 45667888
Q ss_pred cCCCEEEecCCcc---cCChhHHHHHHHHHHHcCCc
Q 025344 113 VGFDTIELNVGSL---EIPEETLLRYVRLVKSAGLK 145 (254)
Q Consensus 113 lGF~~IEISdGti---~i~~~~r~~lI~~~~~~G~~ 145 (254)
+|+. ++.+.+ .=+.+++.+.++.+++.+..
T Consensus 200 ~Gi~---v~~~~i~Glget~e~~~~~l~~l~~l~~~ 232 (350)
T 3t7v_A 200 QGYC---VEDGILTGVGNDIESTILSLRGMSTNDPD 232 (350)
T ss_dssp HTCE---EEEEEEESSSCCHHHHHHHHHHHHHTCCS
T ss_pred cCCe---EccceEeecCCCHHHHHHHHHHHHhCCCC
Confidence 9985 333332 45778999999999998754
No 241
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=76.90 E-value=14 Score=35.02 Aligned_cols=84 Identities=23% Similarity=0.214 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHcC--CCEEEecCCcccC-------ChhHHHHHHHHHHHc--------CC----------cccceeeeec
Q 025344 102 AFKEYVEDCKQVG--FDTIELNVGSLEI-------PEETLLRYVRLVKSA--------GL----------KAKPKFAVMF 154 (254)
Q Consensus 102 ~~~~yl~~~k~lG--F~~IEISdGti~i-------~~~~r~~lI~~~~~~--------G~----------~v~~E~g~k~ 154 (254)
..++|++-++.+. .|+|||+-++=.. ..+...++++.+++. ++ .-+|=+.+|
T Consensus 197 ~~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VK- 275 (415)
T 3i65_A 197 IVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVK- 275 (415)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEE-
T ss_pred cHHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEE-
Confidence 5788887777665 8999999776432 334455677776663 10 112323444
Q ss_pred CCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccc
Q 025344 155 NKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDV 209 (254)
Q Consensus 155 ~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi 209 (254)
++| .| +.+++.+.++...++|||.|++-.+..
T Consensus 276 ----------------i~p-d~------~~~~i~~iA~~a~~aGaDgIiv~Ntt~ 307 (415)
T 3i65_A 276 ----------------LAP-DL------NQEQKKEIADVLLETNIDGMIISNTTT 307 (415)
T ss_dssp ----------------ECS-CC------CHHHHHHHHHHHHHHTCSEEEECCCBS
T ss_pred ----------------ecC-CC------CHHHHHHHHHHHHHcCCcEEEEeCCCc
Confidence 222 12 356789999999999999999988643
No 242
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=76.88 E-value=2.8 Score=38.19 Aligned_cols=47 Identities=19% Similarity=0.285 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc---cCC----hhHHHHHHHHHHHcCCcccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL---EIP----EETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti---~i~----~~~r~~lI~~~~~~G~~v~~ 148 (254)
.+.+.++.++++||+.||+++..+ ..+ .+...++.+.+++.|+++.+
T Consensus 34 ~~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~ 87 (387)
T 1bxb_A 34 DPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPM 87 (387)
T ss_dssp CHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCE
T ss_pred CHHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEE
Confidence 688999999999999999983221 112 45677888899999999754
No 243
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=76.72 E-value=9.6 Score=34.68 Aligned_cols=126 Identities=16% Similarity=0.182 Sum_probs=66.3
Q ss_pred cCChhHHHHHHHHHHhCC-------cee--cCC--cHHHHHHHhCC--chHHHHHHHHHHcCCCEEEecCCcccCChhHH
Q 025344 66 LMPKPFIEEVVKRAHQHD-------VYV--STG--DWAEHLIRNGP--SAFKEYVEDCKQVGFDTIELNVGSLEIPEETL 132 (254)
Q Consensus 66 l~~~~~l~eKi~l~~~~g-------V~v--~~G--tl~E~a~~qg~--~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r 132 (254)
....+.++.-++.+++++ |.+ +++ .|.|. .+++ +.+.++-+.+++.|++.|-.|. .+
T Consensus 112 ~~G~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l--~~~~~~e~V~~lA~~a~~~G~dGvV~s~------~E-- 181 (303)
T 3ru6_A 112 SAGKIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSI--YRQKIEEAVINFSKISYENGLDGMVCSV------FE-- 181 (303)
T ss_dssp GGCHHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHH--HSSCHHHHHHHHHHHHHHTTCSEEECCT------TT--
T ss_pred cCCHHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHH--HcCCHHHHHHHHHHHHHHcCCCEEEECH------HH--
Confidence 334556777777776665 212 233 35443 2230 1233455567788988765532 22
Q ss_pred HHHHHHHHHcCCc-ccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccc
Q 025344 133 LRYVRLVKSAGLK-AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCK 211 (254)
Q Consensus 133 ~~lI~~~~~~G~~-v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d 211 (254)
...||.....+|. |-|=++.+ .+.. +-+.++..+...++|||+++++ +|.||.
T Consensus 182 ~~~IR~~~~~~fl~VTPGIr~q--G~~~-----------------------~DQ~Rv~t~~~a~~aGAd~iVv-Gr~I~~ 235 (303)
T 3ru6_A 182 SKKIKEHTSSNFLTLTPGIRPF--GETN-----------------------DDQKRVANLAMARENLSDYIVV-GRPIYK 235 (303)
T ss_dssp HHHHHHHSCTTSEEEECCCCTT--C-------------------------------CCSHHHHHHTTCSEEEE-CHHHHT
T ss_pred HHHHHHhCCCccEEECCCcCcc--cCCc-----------------------ccccccCCHHHHHHcCCCEEEE-ChHHhC
Confidence 3456665555553 34433322 1111 1233455667778999997666 799999
Q ss_pred cCCCccHHHHHHHHhccC
Q 025344 212 HADSLRADIIAKVIGRLG 229 (254)
Q Consensus 212 ~~g~~r~d~i~~ii~~l~ 229 (254)
++.- ...+++|.+.+.
T Consensus 236 a~dp--~~a~~~i~~~i~ 251 (303)
T 3ru6_A 236 NENP--RAVCEKILNKIH 251 (303)
T ss_dssp SSCH--HHHHHHHHHHHC
T ss_pred CCCH--HHHHHHHHHHHH
Confidence 8753 345566665555
No 244
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=76.65 E-value=4.8 Score=35.48 Aligned_cols=78 Identities=22% Similarity=0.230 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHcCCC---EEEecCCcccC--------ChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccc
Q 025344 102 AFKEYVEDCKQVGFD---TIELNVGSLEI--------PEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGA 169 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~---~IEISdGti~i--------~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~~ 169 (254)
.+.+..+.+.+.||| +|||+-++=.. +.+...++|+.+++. ++ | +.+|-.
T Consensus 107 ~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~---P-v~vK~~-------------- 168 (314)
T 2e6f_A 107 ENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGL---P-FGVKMP-------------- 168 (314)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCS---C-EEEEEC--------------
T ss_pred HHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCC---C-EEEEEC--------------
Confidence 455555666777999 99997653221 455667888888874 21 2 455421
Q ss_pred ccccCCCccccccCHHHHHHHHHHHHHcC-CcEEEEecc
Q 025344 170 YVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSD 207 (254)
Q Consensus 170 ~~~~~~~~~~~~~d~~~~i~~~~~dLeAG-A~~ViiEar 207 (254)
+. | |.+++.+.++...++| |+.|++-.+
T Consensus 169 ---~~-~------~~~~~~~~a~~~~~aG~~d~i~v~~~ 197 (314)
T 2e6f_A 169 ---PY-F------DIAHFDTAAAVLNEFPLVKFVTCVNS 197 (314)
T ss_dssp ---CC-C------CHHHHHHHHHHHHTCTTEEEEEECCC
T ss_pred ---CC-C------CHHHHHHHHHHHHhcCCceEEEEeCC
Confidence 10 1 4667788899999999 999987664
No 245
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=76.34 E-value=2.7 Score=39.42 Aligned_cols=46 Identities=9% Similarity=0.143 Sum_probs=35.9
Q ss_pred HHHHHHcCCCEEEecC--------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNV--------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
|+++++|||++|.++= |.- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 62 LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 125 (488)
T 2wc7_A 62 LDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVF 125 (488)
T ss_dssp HHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5678999999999973 211 11 2578999999999999999877755
No 246
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=76.30 E-value=3.1 Score=38.62 Aligned_cols=52 Identities=12% Similarity=0.176 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHcCCCEEEecC------------Cc----ccC-----ChhHHHHHHHHHHHcCCcccceeeee
Q 025344 102 AFKEYVEDCKQVGFDTIELNV------------GS----LEI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISd------------Gt----i~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
-.++.++++++|||++|++|= |. -.+ +.++..++|+.+.++|++|+-.+-..
T Consensus 16 i~~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 16 VAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp HHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred HHHHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 445566788999999999972 22 223 25789999999999999998776553
No 247
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=76.11 E-value=20 Score=37.99 Aligned_cols=102 Identities=13% Similarity=0.219 Sum_probs=70.4
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~ 182 (254)
++++++.+.+.|.+.|-|.+..=++.. ...+++.+++.|..+. ..+..-...+ +|+. ...-
T Consensus 629 ~~~~v~~a~~~Gvd~irif~~~sd~~~--~~~~~~~~~e~g~~~~--~~i~~~~~~~------------~pe~---~~~~ 689 (1150)
T 3hbl_A 629 IHKFVQESAKAGIDVFRIFDSLNWVDQ--MKVANEAVQEAGKISE--GTICYTGDIL------------NPER---SNIY 689 (1150)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTCCGGG--GHHHHHHHHHTTCEEE--EEEECCSCTT------------CTTT---CSSS
T ss_pred HHHHHHHHHhCCcCEEEEEeeCCHHHH--HHHHHHHHHHHhhhee--EEEeeccccc------------Chhh---cCCC
Confidence 577888899999999999887766543 3567888888875543 2221111111 1110 0123
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
|++.+++.++.-.++||+.| .|+|..|-..+..+.++++.+
T Consensus 690 ~~~~~~~~a~~~~~~Ga~~i-----~l~Dt~G~~~P~~~~~lv~~l 730 (1150)
T 3hbl_A 690 TLEYYVKLAKELEREGFHIL-----AIKDMAGLLKPKAAYELIGEL 730 (1150)
T ss_dssp SHHHHHHHHHHHHHTTCSEE-----EEEETTCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCee-----eEcCccCCCCHHHHHHHHHHH
Confidence 68999999999999999865 478899999988888877544
No 248
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=76.04 E-value=7.3 Score=35.65 Aligned_cols=21 Identities=14% Similarity=0.422 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHHcCCcEEEE
Q 025344 183 DVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~Vii 204 (254)
+.++.++.++..-++ +++|-+
T Consensus 228 ~~~~~~~~a~~l~~~-vd~i~v 248 (343)
T 3kru_A 228 NIDMMVEYINMIKDK-VDLIDV 248 (343)
T ss_dssp CHHHHHHHHHHHTTT-CSEEEE
T ss_pred cHHHHHHHHHHhhcc-ccEEec
Confidence 578888888888888 999988
No 249
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=75.99 E-value=21 Score=37.88 Aligned_cols=164 Identities=12% Similarity=0.125 Sum_probs=105.6
Q ss_pred CCCCCCcchhHHHHHHHhh-cccccEEeecCcccccCChhHHHHHHHHHHhCCcee----c-CCcHH--HHHHHhCCchH
Q 025344 32 PHYTLSSSHNVLEDIFESM-GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV----S-TGDWA--EHLIRNGPSAF 103 (254)
Q Consensus 32 kG~~~~~g~~~~~DlLe~a-g~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v----~-~Gtl~--E~a~~qg~~~~ 103 (254)
.||... +.+-.+..++.| ..-||.+-+...++-+.. .+.-++..++.|-.+ | +|+.+ |.+-..+++.+
T Consensus 619 vgy~~~-pd~v~~~~v~~a~~~Gvd~irif~~~sd~~~---~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~ 694 (1150)
T 3hbl_A 619 VGYKNY-PDNVIHKFVQESAKAGIDVFRIFDSLNWVDQ---MKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYY 694 (1150)
T ss_dssp TCSSCC-CHHHHHHHHHHHHHTTCCEEEEECTTCCGGG---GHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHH
T ss_pred cccccC-CchhHHHHHHHHHhCCcCEEEEEeeCCHHHH---HHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHH
Confidence 355444 334444444443 445999999887766644 566777788888543 2 24321 11111222245
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccC
Q 025344 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVED 183 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d 183 (254)
-+..+.+.+.|.+.|-|.|-.--+.+..-.++|+.++++ +.+ .++.-+ +. |
T Consensus 695 ~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~-~~~--~i~~H~-Hn-------------------------t 745 (1150)
T 3hbl_A 695 VKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSA-VDL--PIHLHT-HD-------------------------T 745 (1150)
T ss_dssp HHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHH-CCS--CEEEEE-CB-------------------------T
T ss_pred HHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHh-cCC--eEEEEe-CC-------------------------C
Confidence 666777788999999999999999999999999999986 322 233311 21 2
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecc--cccccCCCccHHHHHHHHhccCC
Q 025344 184 VDLLIRRAERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVIGRLGL 230 (254)
Q Consensus 184 ~~~~i~~~~~dLeAGA~~ViiEar--gi~d~~g~~r~d~i~~ii~~l~~ 230 (254)
...-+-.+...++|||+. |++- |+=...||...+.+-..++..+.
T Consensus 746 ~G~a~An~laA~~aGa~~--vD~ai~GlG~~~gn~~lE~lv~~L~~~g~ 792 (1150)
T 3hbl_A 746 SGNGLLTYKQAIDAGVDI--IDTAVASMSGLTSQPSANSLYYALNGFPR 792 (1150)
T ss_dssp TSCHHHHHHHHHHTTCSE--EEEBCGGGCSBTSCCBHHHHHHHTTTSSC
T ss_pred CcHHHHHHHHHHHhCCCE--EEEeccccCCCCCCccHHHHHHHHHhcCC
Confidence 223377888899999996 5664 88777888777766666655543
No 250
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=75.90 E-value=4.6 Score=38.47 Aligned_cols=127 Identities=12% Similarity=0.014 Sum_probs=73.5
Q ss_pred HHHHHHHcCCCEEEecCCc--------------------ccCC-------hhHHHHHHHHHHHcCCcccceeeeecCCCC
Q 025344 106 YVEDCKQVGFDTIELNVGS--------------------LEIP-------EETLLRYVRLVKSAGLKAKPKFAVMFNKSD 158 (254)
Q Consensus 106 yl~~~k~lGF~~IEISdGt--------------------i~i~-------~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~ 158 (254)
=|+++++|||++|+||==+ -.++ .++..++|+.+.++|++|+-.+-..+-..+
T Consensus 42 ~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~ 121 (527)
T 1gcy_A 42 QAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNRG 121 (527)
T ss_dssp HHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEeecCcCCC
Confidence 3678899999999998322 2344 789999999999999999887766422111
Q ss_pred CC-----Cccccccccc--cccCCCc-----------------cccccCHHHHHHHHHHHHH-cCCcEEEEecccccccC
Q 025344 159 IP-----SDRDRAFGAY--VARAPRS-----------------TEYVEDVDLLIRRAERCLE-AGADMIMIDSDDVCKHA 213 (254)
Q Consensus 159 v~-----~~~d~~~~~~--~~~~~~~-----------------~~~~~d~~~~i~~~~~dLe-AGA~~ViiEargi~d~~ 213 (254)
-. ......+-.. -.+..|. .+-..-.+.+++.++..++ .|+|=.-+.+=
T Consensus 122 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~f~~~~~dLn~~np~Vr~~i~~~~~~w~~~~gvDGfRlDa~------ 195 (527)
T 1gcy_A 122 YPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVYGMFRDEFTNLRSQYGAGGFRFDFV------ 195 (527)
T ss_dssp CSSCSCCCCSSSSCBGGGSCCCSSSCBTTBSSCCSTTSTTBBCTTSHHHHHHHHHHHHHHHHHSCEEEEEESCG------
T ss_pred CCCccccCCCcchhcccccCCCCCcccCcccCccccccCCccccCCHHHHHHHHHHHHHHHHhcCCCeEEEecc------
Confidence 00 0000000000 0011121 0001123567777777776 88887777664
Q ss_pred CCccHHHHHHHHhccC-CCceEEecC
Q 025344 214 DSLRADIIAKVIGRLG-LEKTMFEAT 238 (254)
Q Consensus 214 g~~r~d~i~~ii~~l~-~~klifEAP 238 (254)
..+..+.+.++.+.+. +--++=|+-
T Consensus 196 ~~i~~~f~~~~~~~~~~p~~~vgE~~ 221 (527)
T 1gcy_A 196 RGYAPERVNSWMTDSADNSFCVGELW 221 (527)
T ss_dssp GGSCHHHHHHHHHHHCTTSEEEECCC
T ss_pred ccCCHHHHHHHHHHhcCCceEEEEec
Confidence 3334567777777774 334555654
No 251
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=75.87 E-value=15 Score=32.57 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHhC--Cce-ec---C---CcHHHHHHHhCCchHHHHHHHHHHcC-CCEEEecCCcccCChhHHHHHHHHH
Q 025344 70 PFIEEVVKRAHQH--DVY-VS---T---GDWAEHLIRNGPSAFKEYVEDCKQVG-FDTIELNVGSLEIPEETLLRYVRLV 139 (254)
Q Consensus 70 ~~l~eKi~l~~~~--gV~-v~---~---Gtl~E~a~~qg~~~~~~yl~~~k~lG-F~~IEISdGti~i~~~~r~~lI~~~ 139 (254)
+.+.+.+...|++ +++ ++ + ||-++.- . +..-++++.+-++| +++|.|- +..+++...++++.+
T Consensus 83 ~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~--~--~~~~~ll~~~l~~g~~dyIDvE---l~~~~~~~~~l~~~a 155 (276)
T 3o1n_A 83 ESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALT--T--GQYIDLNRAAVDSGLVDMIDLE---LFTGDDEVKATVGYA 155 (276)
T ss_dssp HHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCC--H--HHHHHHHHHHHHHTCCSEEEEE---GGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCC--H--HHHHHHHHHHHhcCCCCEEEEE---CcCCHHHHHHHHHHH
Confidence 5588888888775 443 22 1 5543311 1 13445666667789 8998875 456778888999999
Q ss_pred HHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 140 KSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 140 ~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
++.|-+++-=..- ... +| +.+++++..++..+.|||.|=|
T Consensus 156 ~~~~~kvI~S~Hd---f~~-------------tP---------~~~el~~~~~~~~~~GaDIvKi 195 (276)
T 3o1n_A 156 HQHNVAVIMSNHD---FHK-------------TP---------AAEEIVQRLRKMQELGADIPKI 195 (276)
T ss_dssp HHTTCEEEEEEEE---SSC-------------CC---------CHHHHHHHHHHHHHTTCSEEEE
T ss_pred HhCCCEEEEEeec---CCC-------------Cc---------CHHHHHHHHHHHHHcCCCEEEE
Confidence 9988887654443 111 11 3678899999999999987644
No 252
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=75.80 E-value=4.7 Score=34.44 Aligned_cols=146 Identities=12% Similarity=0.131 Sum_probs=83.2
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecC------C-cHHHHHHHhCCchHHHHHHHHH
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST------G-DWAEHLIRNGPSAFKEYVEDCK 111 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~------G-tl~E~a~~qg~~~~~~yl~~~k 111 (254)
+...++.+++.+-+| |+++..++|. .++.-.+.++ ++.+++ | ..++. +. ...+.+.
T Consensus 18 t~~~i~~l~~~a~~~------g~~~v~v~~~-~v~~~~~~l~--~v~v~~v~~~P~g~~~~~~-------k~-~~~~~A~ 80 (225)
T 1mzh_A 18 SEKEIEEFVLKSEEL------GIYAVCVNPY-HVKLASSIAK--KVKVCCVIGFPLGLNKTSV-------KV-KEAVEAV 80 (225)
T ss_dssp CHHHHHHHHHHHHHT------TCSEEEECGG-GHHHHHHHCS--SSEEEEEESTTTCCSCHHH-------HH-HHHHHHH
T ss_pred CHHHHHHHHHHHHHh------CCeEEEECHH-HHHHHHHHhc--CCceeeEecCCCCccchhh-------hH-HHHHHHH
Confidence 567888888877766 6665556654 5665444443 676653 2 12221 11 2346777
Q ss_pred HcCCCEEE--ecCCccc-CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHH
Q 025344 112 QVGFDTIE--LNVGSLE-IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLI 188 (254)
Q Consensus 112 ~lGF~~IE--ISdGti~-i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i 188 (254)
+.|++.|+ |+-|.+. -..+...+.|+.+++.-= | +.+|--. + ++ .| |.++++
T Consensus 81 ~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~---p-v~vKvi~-e-------------~~-~l------~~~~~~ 135 (225)
T 1mzh_A 81 RDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP---S-AVHKVIV-E-------------TP-YL------NEEEIK 135 (225)
T ss_dssp HTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT---T-SEEEEEC-C-------------GG-GC------CHHHHH
T ss_pred HcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc---C-ceEEEEE-e-------------CC-CC------CHHHHH
Confidence 89999999 4444421 123444456777776421 1 2333200 0 00 12 467789
Q ss_pred HHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 189 RRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 189 ~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
+.++...++|||.|-+-. |.+ .|....+.+..+.+.++
T Consensus 136 ~~a~~a~eaGad~I~tst-g~~--~gga~~~~i~~v~~~v~ 173 (225)
T 1mzh_A 136 KAVEICIEAGADFIKTST-GFA--PRGTTLEEVRLIKSSAK 173 (225)
T ss_dssp HHHHHHHHHTCSEEECCC-SCS--SSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEECC-CCC--CCCCCHHHHHHHHHHhC
Confidence 999999999999994432 432 23345667776666553
No 253
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=75.79 E-value=2.8 Score=38.45 Aligned_cols=46 Identities=20% Similarity=0.337 Sum_probs=36.1
Q ss_pred HHHHHHcCCCEEEecC--------C-----cccCC------hhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNV--------G-----SLEIP------EETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISd--------G-----ti~i~------~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
++++++|||++|+++= | ...+. .++..++|+.+.++|++|+-.+-.
T Consensus 27 ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 91 (405)
T 1ht6_A 27 VDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIVI 91 (405)
T ss_dssp HHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5677999999999872 2 12333 578999999999999999877654
No 254
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=75.49 E-value=19 Score=32.07 Aligned_cols=105 Identities=16% Similarity=0.190 Sum_probs=73.3
Q ss_pred cchhHHHHHHHhhccccc----------EEeecCccc-ccCChh--HHHHHHHHHHhCCc---eecC-CcHHHHHHHhCC
Q 025344 38 SSHNVLEDIFESMGQFVD----------GLKFSGGSH-SLMPKP--FIEEVVKRAHQHDV---YVST-GDWAEHLIRNGP 100 (254)
Q Consensus 38 ~g~~~~~DlLe~ag~yID----------~lKfg~GT~-~l~~~~--~l~eKi~l~~~~gV---~v~~-Gtl~E~a~~qg~ 100 (254)
+|..+.+.+|...-.+|. ++|++.|-. +-.+.. -++.-|+|+++-|+ ++|| ||+-- .
T Consensus 100 tgag~t~~~L~~~~T~VNaLvsPTG~~G~VkIsTGp~Ss~~~~~~V~vetAiaml~dmG~~SvKffPm~Gl~~------l 173 (249)
T 3m0z_A 100 TGVATSRALLGQNETVVNGLVSPTGTPGMVKISTGPLSSGAADGIVPLETAIALLKDMGGSSIKYFPMGGLKH------R 173 (249)
T ss_dssp GGHHHHHHHHTSSCSEEEEEEBCCSSTTEEECCCSTTGGGSSCCEEEHHHHHHHHHHTTCCEEEECCCTTTTT------H
T ss_pred cchHHHHHhccCCCeEEEEEEcCCCccceEEeccCccccCCCCceeeHHHHHHHHHHcCCCeeeEeecCCccc------H
Confidence 577778888876555654 679999932 112211 17888999999987 8888 65310 0
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCc-ccceeee
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKFAV 152 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~-v~~E~g~ 152 (254)
+.+...-+.|.+-|| ++|=.-| |+.+...++++.+.+.|-+ ++|.+--
T Consensus 174 ~E~~avAka~a~~g~-~lEPTGG---Idl~N~~~I~~i~l~aGv~~viPHIYs 222 (249)
T 3m0z_A 174 AEFEAVAKACAAHDF-WLEPTGG---IDLENYSEILKIALDAGVSKIIPHIYS 222 (249)
T ss_dssp HHHHHHHHHHHHTTC-EEEEBSS---CCTTTHHHHHHHHHHHTCSCBCCBCCG
T ss_pred HHHHHHHHHHHHcCc-eECCCCC---ccHhhHHHHHHHHHHcCCCeecccccc
Confidence 134444578899999 9998766 5667778899999999986 7786643
No 255
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=75.47 E-value=2.7 Score=37.12 Aligned_cols=68 Identities=21% Similarity=0.272 Sum_probs=48.9
Q ss_pred HHHHHHHHHhCCc-eec--CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc
Q 025344 72 IEEVVKRAHQHDV-YVS--TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (254)
Q Consensus 72 l~eKi~l~~~~gV-~v~--~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v 146 (254)
+++-|+..+++|- .|- |+..- .+....++.++.+.+.|+++|||+.+... .+....+.+.+++.|+.+
T Consensus 173 ~~~~i~~i~~~Gg~~VlAHP~r~~-----~~~~~~~~~l~~l~~~g~~giEv~~~~~~--~~~~~~~~~~a~~~gl~~ 243 (292)
T 2yb1_A 173 LEDAVGWIVGAGGMAVIAHPGRYD-----MGRTLIERLILDFQAAGGQGIEVASGSHS--LDDMHKFALHADRHGLYA 243 (292)
T ss_dssp HHHHHHHHHHTTCEEEECCGGGSS-----CCHHHHHHHHHHHHHTTCCEEEEEETTCC--HHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHcCCEEEEECcCccc-----cchhhHHHHHHHHHhCCCCEEEEeCCCCC--HHHHHHHHHHHHHcCCce
Confidence 7899999998774 333 34210 01012567777888899999999999875 556678889999999875
No 256
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=75.39 E-value=9.6 Score=32.83 Aligned_cols=109 Identities=9% Similarity=0.096 Sum_probs=64.8
Q ss_pred HHHHHHHhhccc-ccEEeecCcccccCChhHHHHHHHHHHhCCceecCCc-------HH---HHHHHhCCchHHHHHHHH
Q 025344 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-------WA---EHLIRNGPSAFKEYVEDC 110 (254)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gt-------l~---E~a~~qg~~~~~~yl~~~ 110 (254)
.+++ ++.+.+. +|++=+......-.....+++..+++.++|+.+...+ |. +....+..+.+++.++.|
T Consensus 38 ~l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A 116 (309)
T 2hk0_A 38 FGPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNV 116 (309)
T ss_dssp SHHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHH
T ss_pred cHHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3445 5554443 6666665443222233568888999999999765422 21 111111112689999999
Q ss_pred HHcCCCEEEecC----Cccc--C-C-hh-------HHHHHHHHHHHcCCcccceee
Q 025344 111 KQVGFDTIELNV----GSLE--I-P-EE-------TLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 111 k~lGF~~IEISd----Gti~--i-~-~~-------~r~~lI~~~~~~G~~v~~E~g 151 (254)
++||.+.|=+.- |... . + .+ ...++.+.+++.|.++.-|..
T Consensus 117 ~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~ 172 (309)
T 2hk0_A 117 AKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVL 172 (309)
T ss_dssp HHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeec
Confidence 999999997653 5431 1 2 22 223455667788888777654
No 257
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=74.66 E-value=32 Score=28.81 Aligned_cols=69 Identities=16% Similarity=0.297 Sum_probs=48.5
Q ss_pred HHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 025344 73 EEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 73 ~eKi~l~~~~-gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (254)
.+-|+-.+++ ++++..++.....+.. .++++++.|.+.|.+.|=+. +++.++..++++.+++.|.++..
T Consensus 69 ~~~i~~i~~~~~~pv~~~~~~~~~~~~---~~~~~~~~~~~~Gad~v~~~----~~~~~~~~~~~~~~~~~g~~~~~ 138 (248)
T 1geq_A 69 FWIVKEFRRHSSTPIVLMTYYNPIYRA---GVRNFLAEAKASGVDGILVV----DLPVFHAKEFTEIAREEGIKTVF 138 (248)
T ss_dssp HHHHHHHHTTCCCCEEEEECHHHHHHH---CHHHHHHHHHHHTCCEEEET----TCCGGGHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhhCCCCEEEEeccchhhhc---CHHHHHHHHHHCCCCEEEEC----CCChhhHHHHHHHHHHhCCCeEE
Confidence 3455555544 6666555544444444 47899999999999999996 34456677889999998877654
No 258
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=74.65 E-value=6.3 Score=38.29 Aligned_cols=116 Identities=15% Similarity=0.131 Sum_probs=69.4
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccC--C--hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSLEI--P--EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i--~--~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
--++.+.+.+.|.+.+=+-|-+-.. + ...-.++|+++++.-+.+ +-+ +. -+-+-.|+. -+++|
T Consensus 282 p~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ip---i~v--gG-GIr~~~d~~--~~~~~----- 348 (555)
T 1jvn_A 282 PVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVP---LTV--GG-GIKDIVDVD--GTKIP----- 348 (555)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSC---EEE--ES-SCSCEECTT--CCEEC-----
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCc---EEE--eC-ccccchhcc--cccch-----
Confidence 3456666677799887555432222 2 223467888877742111 111 00 111112221 23443
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEeccccc-------ccCCCccHHHHHHHHhccCCCceEEecCC
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVC-------KHADSLRADIIAKVIGRLGLEKTMFEATN 239 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~-------d~~g~~r~d~i~~ii~~l~~~klifEAP~ 239 (254)
..+.+++.++|||++|+|-+.-+. +.++..+.++++++.+++|-++++.=..-
T Consensus 349 --------~~~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~ 408 (555)
T 1jvn_A 349 --------ALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDP 408 (555)
T ss_dssp --------HHHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECE
T ss_pred --------HHHHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEc
Confidence 378899999999999999886433 44577788999999998887777765543
No 259
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=74.63 E-value=17 Score=30.56 Aligned_cols=94 Identities=18% Similarity=0.274 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCC-hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIP-EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~-~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~ 180 (254)
..-++.+.+.+.|.++|.+++..-.-. ...-.++|+.+++. +++..- + . -+
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-------~~ipvi---~---~---------------gg 82 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ-------IDIPFT---V---G---------------GG 82 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT-------CCSCEE---E---E---------------SS
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHh-------CCCCEE---E---e---------------CC
Confidence 345566777889999999997653322 22335667777662 221100 0 0 01
Q ss_pred ccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCce
Q 025344 181 VEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKT 233 (254)
Q Consensus 181 ~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~kl 233 (254)
..+ .++++..+++||+.|++=..-+.+ .+.+.++++.++.+++
T Consensus 83 I~~----~~~~~~~~~~Gad~V~lg~~~l~~------p~~~~~~~~~~g~~~i 125 (253)
T 1thf_D 83 IHD----FETASELILRGADKVSINTAAVEN------PSLITQIAQTFGSQAV 125 (253)
T ss_dssp CCS----HHHHHHHHHTTCSEEEESHHHHHC------THHHHHHHHHHCGGGE
T ss_pred CCC----HHHHHHHHHcCCCEEEEChHHHhC------hHHHHHHHHHcCCCcE
Confidence 113 356788889999999985442222 3567778877776654
No 260
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=74.51 E-value=36 Score=28.27 Aligned_cols=142 Identities=13% Similarity=0.177 Sum_probs=74.6
Q ss_pred HHHHHHhCCceecC-CcHHHHHHHhCCc--hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceee
Q 025344 75 VVKRAHQHDVYVST-GDWAEHLIRNGPS--AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 75 Ki~l~~~~gV~v~~-Gtl~E~a~~qg~~--~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g 151 (254)
.++.. ++++.++. +.--|-. .+++ .+.+..+.+.+.|+++|++. +. ..|+.+++.- . +|=++
T Consensus 10 ~~~~~-~~~~~~~~~~~~~~p~--~~~~~~~~~~~a~~~~~~G~~~i~~~------~~----~~i~~i~~~~-~-~p~i~ 74 (234)
T 1yxy_A 10 LMEQL-KGGIIVSCQALPGEPL--YSETGGIMPLMAKAAQEAGAVGIRAN------SV----RDIKEIQAIT-D-LPIIG 74 (234)
T ss_dssp HHHHH-TTSCEEECCCCTTSTT--CCTTCCSHHHHHHHHHHHTCSEEEEE------SH----HHHHHHHTTC-C-SCEEE
T ss_pred HHHHH-hCCEEEEeeCCCCCCC--cCCccchHHHHHHHHHHCCCcEeecC------CH----HHHHHHHHhC-C-CCEEe
Confidence 33444 77775554 3111111 1334 67888899999999999985 11 3466665531 0 11122
Q ss_pred eecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCC
Q 025344 152 VMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 231 (254)
Q Consensus 152 ~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~ 231 (254)
+-.. +.+ |.. .++.+ -.++++..+++||+.|.+.+.-..+.+|..-.++++.+-+.++--
T Consensus 75 ~~~~--~~~---~~~--~~i~~-------------~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~ 134 (234)
T 1yxy_A 75 IIKK--DYP---PQE--PFITA-------------TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQ 134 (234)
T ss_dssp ECBC--CCT---TSC--CCBSC-------------SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTC
T ss_pred eEcC--CCC---ccc--cccCC-------------hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCC
Confidence 2000 000 100 01111 156788889999999998876433333333467788777666433
Q ss_pred ceEEecCCchhHHHHHHHhCC
Q 025344 232 KTMFEATNPRTSEWFIRRYGP 252 (254)
Q Consensus 232 klifEAP~k~qQ~~~I~~~Gp 252 (254)
.++.+...... .......|.
T Consensus 135 ~v~~~~~t~~e-a~~a~~~Ga 154 (234)
T 1yxy_A 135 LLMADISTFDE-GLVAHQAGI 154 (234)
T ss_dssp EEEEECSSHHH-HHHHHHTTC
T ss_pred eEEEeCCCHHH-HHHHHHcCC
Confidence 46667655433 323334444
No 261
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=74.47 E-value=2.3 Score=42.36 Aligned_cols=24 Identities=13% Similarity=0.117 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHHcCCcccceeeee
Q 025344 130 ETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 130 ~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
++..++|+.+.++|++|+-.+-..
T Consensus 379 ~efk~LV~~aH~~GIkVIlDvV~N 402 (884)
T 4aio_A 379 IEYRQMVQALNRIGLRVVMDVVYN 402 (884)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHhcCCceeeeeccc
Confidence 458899999999999998777553
No 262
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=74.46 E-value=34 Score=32.43 Aligned_cols=114 Identities=20% Similarity=0.293 Sum_probs=67.0
Q ss_pred HHHHHHHhhcccccEEee--cCcccccCChhHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 025344 42 VLEDIFESMGQFVDGLKF--SGGSHSLMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (254)
Q Consensus 42 ~~~DlLe~ag~yID~lKf--g~GT~~l~~~~~l~eKi~l~~~~--gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~ 117 (254)
.++.+++ +| +|++=+ +.|. ++ ...+.|+.++++ ++++..|+- . . .+..+.+.+.|.|+
T Consensus 259 ~a~~~~~-aG--~d~v~i~~~~G~----~~-~~~~~i~~i~~~~~~~pvi~~~v-------~--t-~~~a~~l~~aGad~ 320 (514)
T 1jcn_A 259 RLDLLTQ-AG--VDVIVLDSSQGN----SV-YQIAMVHYIKQKYPHLQVIGGNV-------V--T-AAQAKNLIDAGVDG 320 (514)
T ss_dssp HHHHHHH-TT--CSEEEECCSCCC----SH-HHHHHHHHHHHHCTTCEEEEEEE-------C--S-HHHHHHHHHHTCSE
T ss_pred HHHHHHH-cC--CCEEEeeccCCc----ch-hHHHHHHHHHHhCCCCceEeccc-------c--h-HHHHHHHHHcCCCE
Confidence 3444444 33 677766 4442 32 356777777777 888876532 1 1 23366778899999
Q ss_pred EEecC--Ccc---------cCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCccccccCHH
Q 025344 118 IELNV--GSL---------EIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVD 185 (254)
Q Consensus 118 IEISd--Gti---------~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~ 185 (254)
|-++. |.+ ..|...-..+++.+++. +..|+.-=|+ .+
T Consensus 321 I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI-----------------------------~~-- 369 (514)
T 1jcn_A 321 LRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGI-----------------------------QT-- 369 (514)
T ss_dssp EEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCC-----------------------------CS--
T ss_pred EEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCC-----------------------------CC--
Confidence 99976 332 23445555666666652 2222222222 22
Q ss_pred HHHHHHHHHHHcCCcEEEEec
Q 025344 186 LLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 186 ~~i~~~~~dLeAGA~~ViiEa 206 (254)
.+.+.+.|++||+.|++=.
T Consensus 370 --~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 370 --VGHVVKALALGASTVMMGS 388 (514)
T ss_dssp --HHHHHHHHHTTCSEEEEST
T ss_pred --HHHHHHHHHcCCCeeeECH
Confidence 3456667889999999955
No 263
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=74.30 E-value=18 Score=33.12 Aligned_cols=168 Identities=8% Similarity=0.079 Sum_probs=92.7
Q ss_pred chhHHHHHHHhhccc--ccEEeecCcccccCChhHHHHHHHHHHhCCceecC----CcHHHHHHHhCCchHHHHHHHHHH
Q 025344 39 SHNVLEDIFESMGQF--VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQ 112 (254)
Q Consensus 39 g~~~~~DlLe~ag~y--ID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~----Gtl~E~a~~qg~~~~~~yl~~~k~ 112 (254)
.+..++.+|+.|-+- ==+|-++-|+...++...+.--..++++++|+|.. |.=+|.+ .+ .++.|++.-.+
T Consensus 36 n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~~VPVaLHlDHg~~~e~i-~~---ai~~~~~~~~~ 111 (306)
T 3pm6_A 36 NLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAASVPITLHLDHAQDPEII-KR---AADLSRSETHE 111 (306)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHCSSCEEEEEEEECCHHHH-HH---HHHTC------
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHCCCCEEEEcCCCCCHHHH-HH---HHHhhhhccCC
Confidence 345555666544321 01344454444444444455556677777777764 3223322 11 22222333333
Q ss_pred cCCCEEEecCCcccCChh--HHHHHHHHHHHcCCcccceeeeecCCCCCCCccccc----cccccccCCCccccccCHHH
Q 025344 113 VGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRA----FGAYVARAPRSTEYVEDVDL 186 (254)
Q Consensus 113 lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~----~~~~~~~~~~~~~~~~d~~~ 186 (254)
-||+.|=|.-...++.+- .=.++++++...|.-|--|+|.=-+. +++.. .+..+| ||++
T Consensus 112 ~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~-----Edgv~~~~~~~~~yT----------~Pee 176 (306)
T 3pm6_A 112 PGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGG-----EDGVQDTVDLEGVLT----------TPEE 176 (306)
T ss_dssp CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCC-----BTTBCCCTTCCCBCC----------CHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccc-----cCCccccccccccCC----------CHHH
Confidence 399999996665554432 22378889999999999999983211 11110 001122 5666
Q ss_pred HHHHHHHHHHcCCcEEEEe---ccccccc-CCCccHHHHHHHHhccC
Q 025344 187 LIRRAERCLEAGADMIMID---SDDVCKH-ADSLRADIIAKVIGRLG 229 (254)
Q Consensus 187 ~i~~~~~dLeAGA~~ViiE---argi~d~-~g~~r~d~i~~ii~~l~ 229 (254)
..+. .+.|.|.+=+= +-|.|.. +-.++.+.+.+|-+.++
T Consensus 177 a~~F----v~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~ 219 (306)
T 3pm6_A 177 SEEF----VATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVG 219 (306)
T ss_dssp HHHH----HTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHT
T ss_pred HHHH----HHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhC
Confidence 6554 45898855331 2389964 56899999999987773
No 264
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=74.21 E-value=16 Score=32.18 Aligned_cols=77 Identities=17% Similarity=0.230 Sum_probs=49.0
Q ss_pred ceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHH
Q 025344 26 VTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKE 105 (254)
Q Consensus 26 lT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~ 105 (254)
|-.=+|.- ......++++..++|++++|+|. |.++..| .+
T Consensus 30 LivALD~~-----~~~~al~l~~~l~~~v~~~KvG~-------------------------------~l~~~~G----~~ 69 (255)
T 3ldv_A 30 VIVALDYD-----NLADALAFVDKIDPSTCRLKVGK-------------------------------EMFTLFG----PD 69 (255)
T ss_dssp EEEEECCS-----SHHHHHHHHTTSCGGGCEEEEEH-------------------------------HHHHHHH----HH
T ss_pred eEEEcCCC-----CHHHHHHHHHHhCCcCcEEEeCH-------------------------------HHHHhhC----HH
Confidence 44445642 66888999999999999999994 2234445 23
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCC
Q 025344 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (254)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~ 144 (254)
.++++++.||..+ ..-=+-+||+-.. ..++.+.+.|.
T Consensus 70 ~v~~Lk~~g~~Vf-lDlK~~DIpnTv~-~a~~~~~~~ga 106 (255)
T 3ldv_A 70 FVRELHKRGFSVF-LDLKFHDIPNTCS-KAVKAAAELGV 106 (255)
T ss_dssp HHHHHHHTTCCEE-EEEEECSCHHHHH-HHHHHHHHTTC
T ss_pred HHHHHHhcCCCEE-EEEecccchhHHH-HHHHHHHhcCC
Confidence 5555666677655 4555567776655 34555555443
No 265
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=74.05 E-value=23 Score=32.82 Aligned_cols=41 Identities=15% Similarity=0.343 Sum_probs=33.3
Q ss_pred HHHHHHHHHcCCcEEEEecc-----cccccCCCccHHHHHHHHhcc
Q 025344 188 IRRAERCLEAGADMIMIDSD-----DVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 188 i~~~~~dLeAGA~~ViiEar-----gi~d~~g~~r~d~i~~ii~~l 228 (254)
...+...+.+||+-+|||.- -++|..-.+..+.+.++++.+
T Consensus 293 ~~~a~AAvA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~i 338 (350)
T 1vr6_A 293 IPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEM 338 (350)
T ss_dssp HHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHH
Confidence 44455668899999999983 567888999999999998654
No 266
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=73.84 E-value=4.6 Score=38.33 Aligned_cols=49 Identities=10% Similarity=0.234 Sum_probs=36.5
Q ss_pred HHHHHHHHHcCCCEEEecCCcc---------------c---------C-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 104 KEYVEDCKQVGFDTIELNVGSL---------------E---------I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti---------------~---------i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
.+=|+++++|||++|+++==+- + + +.++..++|+.+.++|++|+-.+-.
T Consensus 27 ~~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 27 ANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp HHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3346788999999999982111 1 2 2689999999999999998766543
No 267
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=73.73 E-value=9.1 Score=35.34 Aligned_cols=25 Identities=8% Similarity=-0.109 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
+.++.++.++..-++|+++|-+=++
T Consensus 254 ~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 254 PTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 4677888898888999999987544
No 268
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=73.69 E-value=5.2 Score=33.34 Aligned_cols=106 Identities=9% Similarity=0.071 Sum_probs=66.8
Q ss_pred HHHHHHHhhccc-ccEEeecCcccccCChhHHHHHHHHHHhCCceecC-C--cHH----HHHHHhCCchHHHHHHHHHHc
Q 025344 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-G--DWA----EHLIRNGPSAFKEYVEDCKQV 113 (254)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~-G--tl~----E~a~~qg~~~~~~yl~~~k~l 113 (254)
.+++.|+.+.+. .|.+=+.... +. ...+++.-++++++|+.+.. . ..+ +....+..+.+++.++.|+.+
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~--~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~l 95 (275)
T 3qc0_A 19 GFAEAVDICLKHGITAIAPWRDQ--VA-AIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAEL 95 (275)
T ss_dssp CHHHHHHHHHHTTCCEEECBHHH--HH-HHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEecccc--cc-ccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 345555555544 5666664421 22 33488888999999997763 2 111 111111112689999999999
Q ss_pred CCCEEEecCCccc---CCh--------hHHHHHHHHHHHcCCccccee
Q 025344 114 GFDTIELNVGSLE---IPE--------ETLLRYVRLVKSAGLKAKPKF 150 (254)
Q Consensus 114 GF~~IEISdGti~---i~~--------~~r~~lI~~~~~~G~~v~~E~ 150 (254)
|.+.|-+..|... .+. +...++.+.+++.|+++.-|-
T Consensus 96 G~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~ 143 (275)
T 3qc0_A 96 GADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEP 143 (275)
T ss_dssp TCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeE
Confidence 9999999888654 222 234456667788898877774
No 269
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=73.66 E-value=3.1 Score=40.19 Aligned_cols=46 Identities=13% Similarity=0.081 Sum_probs=35.9
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
|+++|+|||++|+++= |.-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 179 LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~ 242 (585)
T 1wzl_A 179 LPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVF 242 (585)
T ss_dssp HHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred hHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 6788999999999982 21111 3688999999999999999876543
No 270
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=73.65 E-value=13 Score=32.22 Aligned_cols=46 Identities=26% Similarity=0.221 Sum_probs=41.1
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
..+++++|.++|-|--.--.+...+-.+.++.+.+.||.|+-|+|=
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge 123 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPD 123 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 7889999999999987776677777889999999999999999986
No 271
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=73.65 E-value=26 Score=28.74 Aligned_cols=72 Identities=15% Similarity=0.182 Sum_probs=42.7
Q ss_pred ccEEeecCcccccCChhHHHHHHHHHHhCCceecCC--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhH
Q 025344 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEET 131 (254)
Q Consensus 54 ID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~G--tl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~ 131 (254)
+|.+=+...+ + +.++..-++++.+++.+.-| |.. . .++++.+.+.|.+.|-+. .. +
T Consensus 33 ~~~i~l~~~~----~-~~~~~i~~i~~~~~~~l~vg~g~~~------~----~~~i~~a~~~Gad~V~~~--~~--~--- 90 (212)
T 2v82_A 33 FDAVEIPLNS----P-QWEQSIPAIVDAYGDKALIGAGTVL------K----PEQVDALARMGCQLIVTP--NI--H--- 90 (212)
T ss_dssp CCEEEEETTS----T-THHHHHHHHHHHHTTTSEEEEECCC------S----HHHHHHHHHTTCCEEECS--SC--C---
T ss_pred CCEEEEeCCC----h-hHHHHHHHHHHhCCCCeEEEecccc------C----HHHHHHHHHcCCCEEEeC--CC--C---
Confidence 6777766543 2 22443334566677654443 321 1 357889999999999522 21 1
Q ss_pred HHHHHHHHHHcCCcccc
Q 025344 132 LLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 132 r~~lI~~~~~~G~~v~~ 148 (254)
.++++.+++.|.++++
T Consensus 91 -~~~~~~~~~~g~~~~~ 106 (212)
T 2v82_A 91 -SEVIRRAVGYGMTVCP 106 (212)
T ss_dssp -HHHHHHHHHTTCEEEC
T ss_pred -HHHHHHHHHcCCCEEe
Confidence 3567778888776654
No 272
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=73.62 E-value=18 Score=31.51 Aligned_cols=70 Identities=20% Similarity=0.282 Sum_probs=44.2
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~I 118 (254)
.+....++++..++|++++|+|. |.++..| .+.++++++.||..+
T Consensus 19 ~~~~al~l~~~~~~~v~~~Kvg~-------------------------------~lf~~~G----~~~v~~L~~~g~~if 63 (239)
T 3tr2_A 19 TVEQARAQINPLTPELCHLKIGS-------------------------------ILFTRYG----PAFVEELMQKGYRIF 63 (239)
T ss_dssp SHHHHHHHHTTCCTTTCEEEEEH-------------------------------HHHHHHH----HHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHhCCcccEEEeCH-------------------------------HHHHhhC----HHHHHHHHhcCCCEE
Confidence 56788899999999999999994 1223344 234555566677655
Q ss_pred EecCCcccCChhHHHHHHHHHHHcCCc
Q 025344 119 ELNVGSLEIPEETLLRYVRLVKSAGLK 145 (254)
Q Consensus 119 EISdGti~i~~~~r~~lI~~~~~~G~~ 145 (254)
..-=+-+||+-.. ..++.+.+.|.-
T Consensus 64 -lDlK~~DI~nTv~-~~~~~~~~~gad 88 (239)
T 3tr2_A 64 -LDLKFYDIPQTVA-GACRAVAELGVW 88 (239)
T ss_dssp -EEEEECSCHHHHH-HHHHHHHHTTCS
T ss_pred -EEecccccchHHH-HHHHHHHhCCCC
Confidence 4444556776655 345555554433
No 273
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=73.50 E-value=5.1 Score=35.42 Aligned_cols=75 Identities=15% Similarity=0.151 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
.+.++++++-+- .+.|=+.-. +..|+.++|.++++.+.+ ...|+ .|+ . .
T Consensus 20 ~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpvi--aGv---g------~--------------- 71 (283)
T 2pcq_A 20 AFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFL--VGL---M------E--------------- 71 (283)
T ss_dssp HHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCE--EEE---C------C---------------
T ss_pred HHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEE--EeC---C------C---------------
Confidence 466777777777 777765433 347999999999998887 33333 344 1 0
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
.+..+-|++++..-++|||.|++=.-
T Consensus 72 ---~~t~~ai~la~~A~~~Gadavlv~~P 97 (283)
T 2pcq_A 72 ---ETLPQAEGALLEAKAAGAMALLATPP 97 (283)
T ss_dssp ---SSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred ---CCHHHHHHHHHHHHhcCCCEEEecCC
Confidence 13777899999999999999988553
No 274
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=73.46 E-value=4.8 Score=34.25 Aligned_cols=95 Identities=13% Similarity=0.199 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccC-ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEI-PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i-~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~ 180 (254)
...++.+.+.+.|++.|-++|-+-.- ....-.++|+++++. +++..-. .-+
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~-------~~ipvi~---------------------~Gg 87 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-------TTLPIIA---------------------SGG 87 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGG-------CCSCEEE---------------------ESC
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHh-------CCCCEEE---------------------eCC
Confidence 46678888899999999998754321 112224677777763 2221000 001
Q ss_pred ccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceE
Q 025344 181 VEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 234 (254)
Q Consensus 181 ~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~kli 234 (254)
..| .+.++..+++||+.|++=.. ... +++.+.++.+.+|.++++
T Consensus 88 i~~----~~~~~~~l~~Gad~V~ig~~-~l~-----dp~~~~~~~~~~g~~~iv 131 (247)
T 3tdn_A 88 AGK----MEHFLEAFLRGADKVSINTA-AVE-----NPSLITQIAQTFGSQAVV 131 (247)
T ss_dssp CCS----HHHHHHHHHTTCSEECCSHH-HHH-----CTHHHHHHHHHHC-----
T ss_pred CCC----HHHHHHHHHcCCCeeehhhH-Hhh-----ChHHHHHHHHHhCCCcEE
Confidence 113 45677778999999998443 221 245677777777766665
No 275
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=73.41 E-value=4.9 Score=37.52 Aligned_cols=50 Identities=8% Similarity=0.154 Sum_probs=37.0
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc------------------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSL------------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti------------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
+.+-|+++++|||++|++|==+- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 23 i~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 23 LQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp HHHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHhcCCCEEEcCccccCCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 33446788999999999982111 02 3688999999999999998766543
No 276
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=73.39 E-value=30 Score=29.75 Aligned_cols=82 Identities=12% Similarity=0.187 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHhCCceecC-CcHH----------------------------HHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 025344 70 PFIEEVVKRAHQHDVYVST-GDWA----------------------------EHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (254)
Q Consensus 70 ~~l~eKi~l~~~~gV~v~~-Gtl~----------------------------E~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (254)
+.+++..++++++|+.++. ++.+ |....+..+.+++.++.|++||.+.|-+
T Consensus 51 ~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~ 130 (340)
T 2zds_A 51 SYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIG 130 (340)
T ss_dssp THHHHHHHHHHHTTCEEEEEEEHHHHHHHHCSCCSHHHHHHSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEeeccccccccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 4588889999999998753 3221 1111111126888999999999999999
Q ss_pred cCCcccC------C-------hhHH-------HHHHHHHHHcCCcccceee
Q 025344 121 NVGSLEI------P-------EETL-------LRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 121 SdGti~i------~-------~~~r-------~~lI~~~~~~G~~v~~E~g 151 (254)
..|...- + .+.+ .++.+.+++.|.++.-|..
T Consensus 131 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~ 181 (340)
T 2zds_A 131 FTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVH 181 (340)
T ss_dssp CCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred ecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 8776531 1 2222 3445567778888777764
No 277
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=73.35 E-value=19 Score=32.67 Aligned_cols=148 Identities=11% Similarity=0.108 Sum_probs=96.5
Q ss_pred hHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHH--HcCCCE
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCK--QVGFDT 117 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~G-tl~E~a~~qg~~~~~~yl~~~k--~lGF~~ 117 (254)
..++++......-||.+-+.+ .+..-+...+-++.++++|+.|... -.+ .+....+.|+..++ +.|.+.
T Consensus 88 ~dv~~~~~a~~~Gvd~~ri~~---~~~nle~~~~~v~~ak~~G~~v~~~~~~~-----~~~~~~~~~l~~~~~~~~G~~~ 159 (320)
T 3dxi_A 88 EDLNHLLLPIIGLVDMIRIAI---DPQNIDRAIVLAKAIKTMGFEVGFNVMYM-----SKWAEMNGFLSKLKAIDKIADL 159 (320)
T ss_dssp GGHHHHHGGGTTTCSEEEEEE---CGGGHHHHHHHHHHHHTTTCEEEEEECCT-----TTGGGSTTSGGGGGGGTTTCSE
T ss_pred hhHHHHHHhhhcCCCEEEEEe---cHHHHHHHHHHHHHHHHCCCEEEEEEEeC-----CCCCCHHHHHHHHHHhhCCCCE
Confidence 356777666668899987765 2222245667778899999876432 110 11001113444443 469999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHc
Q 025344 118 IELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEA 197 (254)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeA 197 (254)
|-|.|-+--+.+.+-.++|+.+++. +. ..++.-+ +. |...-+..+...++|
T Consensus 160 i~l~Dt~G~~~P~~~~~lv~~l~~~-~~--~~i~~H~-Hn-------------------------~~G~a~an~laA~~a 210 (320)
T 3dxi_A 160 FCMVDSFGGITPKEVKNLLKEVRKY-TH--VPVGFHG-HD-------------------------NLQLGLINSITAIDD 210 (320)
T ss_dssp EEEECTTSCCCHHHHHHHHHHHHHH-CC--SCEEEEC-BC-------------------------TTSCHHHHHHHHHHT
T ss_pred EEECcccCCCCHHHHHHHHHHHHHh-CC--CeEEEEe-CC-------------------------CCccHHHHHHHHHHh
Confidence 9999999888999888999999885 22 2244421 11 122236677778999
Q ss_pred CCcEEEEecc--cccccCCCccHHHHHHHHhc
Q 025344 198 GADMIMIDSD--DVCKHADSLRADIIAKVIGR 227 (254)
Q Consensus 198 GA~~ViiEar--gi~d~~g~~r~d~i~~ii~~ 227 (254)
||+.| ++- |+=...||..++.+-..++.
T Consensus 211 Ga~~v--d~si~GlG~~~GN~~~E~lv~~L~~ 240 (320)
T 3dxi_A 211 GIDFI--DATITGMGRGAGNLKMELLLTYLNK 240 (320)
T ss_dssp TCSEE--EEBGGGCSSTTCBCBHHHHHHHHHH
T ss_pred CCCEE--EEeccccCCcccchhHHHHHHHHHh
Confidence 99954 664 88777999998887777754
No 278
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=73.21 E-value=9.5 Score=35.89 Aligned_cols=27 Identities=11% Similarity=0.145 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHH-cCCcEEEEecccc
Q 025344 183 DVDLLIRRAERCLE-AGADMIMIDSDDV 209 (254)
Q Consensus 183 d~~~~i~~~~~dLe-AGA~~ViiEargi 209 (254)
+.++.++.++..-+ +|+++|-|=+++.
T Consensus 262 ~~ed~~~la~~L~~~~Gvd~I~vs~g~~ 289 (419)
T 3l5a_A 262 TIDEFNQLIDWVMDVSNIQYLAIASWGR 289 (419)
T ss_dssp CHHHHHHHHHHHHHHSCCCCEEECCTTC
T ss_pred CHHHHHHHHHHHHhhcCCcEEEEeeCCc
Confidence 47788888888888 9999999977643
No 279
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=73.19 E-value=5 Score=37.42 Aligned_cols=49 Identities=12% Similarity=0.150 Sum_probs=36.4
Q ss_pred HHHHHHHHHcCCCEEEecCCcc------------------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 104 KEYVEDCKQVGFDTIELNVGSL------------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti------------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
.+-|+++++|||++|++|==+- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 26 ~~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 26 HDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3346678999999999972111 02 3689999999999999998766544
No 280
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=73.18 E-value=3.9 Score=38.13 Aligned_cols=48 Identities=10% Similarity=0.149 Sum_probs=36.7
Q ss_pred HHHHHHHcCCCEEEecCCcc---------------------cC-----ChhHHHHHHHHHHHcCCcccceeeee
Q 025344 106 YVEDCKQVGFDTIELNVGSL---------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 106 yl~~~k~lGF~~IEISdGti---------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
-|+++++|||++|+++==+- .+ +.++..++|+.+.++|++|+-.+-..
T Consensus 48 ~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (478)
T 2guy_A 48 KLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVAN 121 (478)
T ss_dssp THHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 35678999999999972111 11 26889999999999999998877553
No 281
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=73.11 E-value=5.1 Score=37.46 Aligned_cols=49 Identities=12% Similarity=0.175 Sum_probs=36.6
Q ss_pred HHHHHHHHHcCCCEEEecCCcc---------------c---------C-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 104 KEYVEDCKQVGFDTIELNVGSL---------------E---------I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti---------------~---------i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
.+=|+++++|||++|++|==+- + + +.++..++|+.+.++|++|+-.+-.
T Consensus 28 ~~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 28 NSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3346788999999999982111 0 2 3689999999999999998766543
No 282
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=73.01 E-value=4.2 Score=34.02 Aligned_cols=51 Identities=10% Similarity=0.081 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHcCCCEEEe---cCCccc-------------C--C-hhHHHHHHHHHHHcCCcccceeee
Q 025344 102 AFKEYVEDCKQVGFDTIEL---NVGSLE-------------I--P-EETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEI---SdGti~-------------i--~-~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
.+++.|+.+|++||++|-| +++... . + .+..-+++..|.++|++|+-++.-
T Consensus 43 ~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~ 112 (351)
T 3vup_A 43 RIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCLWN 112 (351)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 7899999999999999998 222210 0 1 123357899999999999988754
No 283
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=72.95 E-value=14 Score=32.16 Aligned_cols=18 Identities=22% Similarity=0.255 Sum_probs=13.7
Q ss_pred HHHHHHHHHcCCcEEEEec
Q 025344 188 IRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 188 i~~~~~dLeAGA~~ViiEa 206 (254)
-++++. +.+|||-|||=+
T Consensus 218 ~e~~~~-~~~gADgvIVGS 235 (262)
T 2ekc_A 218 KEHARE-IGSFADGVVVGS 235 (262)
T ss_dssp HHHHHH-HHTTSSEEEECH
T ss_pred HHHHHH-HHcCCCEEEECH
Confidence 345566 899999999954
No 284
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=72.79 E-value=12 Score=34.35 Aligned_cols=93 Identities=18% Similarity=0.153 Sum_probs=57.3
Q ss_pred CChhHHHHHHHHHHhCCc-eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc-CC
Q 025344 67 MPKPFIEEVVKRAHQHDV-YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA-GL 144 (254)
Q Consensus 67 ~~~~~l~eKi~l~~~~gV-~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~-G~ 144 (254)
++.+.+.+-|+-.++++- ++.-+... + . .++++.+.+.|.+.|+|+-..- ..+...+.|+.+++. +.
T Consensus 78 ~s~e~~~~~I~~vk~~~~~pvga~ig~------~--~-~e~a~~l~eaGad~I~ld~a~G--~~~~~~~~i~~i~~~~~~ 146 (361)
T 3khj_A 78 MDMESQVNEVLKVKNSGGLRVGAAIGV------N--E-IERAKLLVEAGVDVIVLDSAHG--HSLNIIRTLKEIKSKMNI 146 (361)
T ss_dssp SCHHHHHHHHHHHHHTTCCCCEEEECT------T--C-HHHHHHHHHTTCSEEEECCSCC--SBHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHhccCceEEEEeCC------C--H-HHHHHHHHHcCcCeEEEeCCCC--CcHHHHHHHHHHHHhcCC
Confidence 344556777777776653 22211100 2 2 6788899999999999854332 234455778877774 44
Q ss_pred cccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 145 KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 145 ~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
.|+. + .+ . + .+.++..+++|||.|.+
T Consensus 147 ~Viv----g----~v-----------~-----------t----~e~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 147 DVIV----G----NV-----------V-----------T----EEATKELIENGADGIKV 172 (361)
T ss_dssp EEEE----E----EE-----------C-----------S----HHHHHHHHHTTCSEEEE
T ss_pred cEEE----c----cC-----------C-----------C----HHHHHHHHHcCcCEEEE
Confidence 3332 1 00 1 2 45678889999999999
No 285
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=72.78 E-value=5.4 Score=34.52 Aligned_cols=50 Identities=12% Similarity=0.075 Sum_probs=31.5
Q ss_pred HHHHHHHHHHcCCCEEEecCC----cccCChhHHHHHHHHHHHcCCcccceeee
Q 025344 103 FKEYVEDCKQVGFDTIELNVG----SLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdG----ti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
.++.++.++++||++|-|.-+ ...=+.+...++|+.|.++|++|+-+++-
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~ 86 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNKMVAVVEVHD 86 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 455677777778877777422 11123445567777777888877776654
No 286
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=72.70 E-value=6 Score=33.26 Aligned_cols=107 Identities=10% Similarity=0.090 Sum_probs=61.7
Q ss_pred HHHHHHHhhccc-ccEEeecCccc------ccCChhHHHHHHHHHHhCCc-eecC-CcHH------HHHHHhCCchHHHH
Q 025344 42 VLEDIFESMGQF-VDGLKFSGGSH------SLMPKPFIEEVVKRAHQHDV-YVST-GDWA------EHLIRNGPSAFKEY 106 (254)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GT~------~l~~~~~l~eKi~l~~~~gV-~v~~-Gtl~------E~a~~qg~~~~~~y 106 (254)
.+++.++.+.++ +|.+=+ |... ...+++.+++.-++++++|+ .++. +.++ +....+..+.+.+.
T Consensus 15 ~~~~~~~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~~ 93 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQI-FAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVNLGAEGELWEKSVASLADD 93 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEE-ESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCCTTCSSTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEE-eCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccCCCCCHHHHHHHHHHHHHH
Confidence 455555554432 455444 2211 12234568889999999999 5443 2221 11111111258899
Q ss_pred HHHHHHcCCCEEEecCCcccCCh----hHHHHHHHHHH-HcCCcccceee
Q 025344 107 VEDCKQVGFDTIELNVGSLEIPE----ETLLRYVRLVK-SAGLKAKPKFA 151 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~----~~r~~lI~~~~-~~G~~v~~E~g 151 (254)
++.|+++|.+.|=+.-|+. +. +...++.+.++ +.|.++.-|-.
T Consensus 94 i~~a~~lGa~~vv~h~g~~--~~~~~~~~l~~l~~~a~~~~gv~l~lEn~ 141 (270)
T 3aam_A 94 LEKAALLGVEYVVVHPGSG--RPERVKEGALKALRLAGVRSRPVLLVENT 141 (270)
T ss_dssp HHHHHHHTCCEEEECCCBS--CHHHHHHHHHHHHHHHTCCSSSEEEEECC
T ss_pred HHHHHHcCCCEEEECCCCC--CHHHHHHHHHHHHHhhcccCCCEEEEecC
Confidence 9999999999999988876 32 22234444454 56776665544
No 287
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=72.64 E-value=8.6 Score=34.56 Aligned_cols=88 Identities=9% Similarity=0.032 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHc-CCCEEEecCCcc----cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCC
Q 025344 102 AFKEYVEDCKQV-GFDTIELNVGSL----EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (254)
Q Consensus 102 ~~~~yl~~~k~l-GF~~IEISdGti----~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~ 176 (254)
..+.-++.++++ ||+.||+.-.-+ .++.++..++.+.+.+.||++.. +- + ++...|-. +.+..
T Consensus 22 ~~~~~L~~i~~~~G~~~ve~~~~~~~~g~~~~~~~~~~~~~~l~~~GL~i~~---~~---~-~~~~~~~~----~~~~~- 89 (367)
T 1tz9_A 22 GDAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQEGLALLG---IE---S-VAIHDAIK----AGTDQ- 89 (367)
T ss_dssp TCCSCHHHHTTSTTCCEEEECCSSSCTTCCCCHHHHHHHHHHHHHTTCEEEE---EC---S-CCCCHHHH----HTCST-
T ss_pred CChHHHHHHhhcCCCCeEEecCCCCCCCCCCCHHHHHHHHHHHHHCCCeEEE---Ee---c-CCCcHHHh----cCCcC-
Confidence 345558889999 999999864322 34666888899999999999764 21 1 11001100 00000
Q ss_pred ccccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 177 STEYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 177 ~~~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
.....+.+.+.++..=++|+..|.+
T Consensus 90 ---r~~~i~~~~~~i~~a~~lG~~~v~~ 114 (367)
T 1tz9_A 90 ---RDHYIDNYRQTLRNLGKCGISLVCY 114 (367)
T ss_dssp ---HHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ---HHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 0123555666667777889999988
No 288
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=72.60 E-value=39 Score=30.32 Aligned_cols=170 Identities=11% Similarity=0.083 Sum_probs=98.0
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecC---C-cHHHHHHHhCCchHHHHHHHHHH--
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHLIRNGPSAFKEYVEDCKQ-- 112 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~---G-tl~E~a~~qg~~~~~~yl~~~k~-- 112 (254)
.+..+++.++.+|.=| +=++---..+.....-....+...+.++.+-| | .=.|-|+.-- +.+++
T Consensus 31 ~~~~~~~a~~asg~e~--vtva~rR~~~~~~~~~~~~~~~i~~~~~~~lpNTag~~ta~eAv~~a--------~lare~~ 100 (265)
T 1wv2_A 31 DLDETRRAIEASGAEI--VTVAVRRTNIGQNPDEPNLLDVIPPDRYTILPNTAGCYDAVEAVRTC--------RLARELL 100 (265)
T ss_dssp SHHHHHHHHHHSCCSE--EEEEGGGCCC-------------CTTTSEEEEECTTCCSHHHHHHHH--------HHHHTTT
T ss_pred CHHHHHHHHHHhCCCe--EEEEEEeeccccCCCcchHHhhhhhcCCEECCcCCCCCCHHHHHHHH--------HHHHHHc
Confidence 5678888888888643 33333222221011124555666676775555 5 2355555432 34455
Q ss_pred cCCCEEEe---cCCcccCCh-hHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHH
Q 025344 113 VGFDTIEL---NVGSLEIPE-ETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLI 188 (254)
Q Consensus 113 lGF~~IEI---SdGti~i~~-~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i 188 (254)
+|-++|-+ ||--.-+|+ .+-.+..+.+.+.||+|+| +-. +| .
T Consensus 101 ~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlp-y~~----------dd-----------------------~ 146 (265)
T 1wv2_A 101 DGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMV-YTS----------DD-----------------------P 146 (265)
T ss_dssp TSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEE-EEC----------SC-----------------------H
T ss_pred CCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEE-EeC----------CC-----------------------H
Confidence 56667653 354444443 3344566666777999987 222 12 5
Q ss_pred HHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceEEecC-CchhHHHHHHHhCCC
Q 025344 189 RRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT-NPRTSEWFIRRYGPK 253 (254)
Q Consensus 189 ~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~klifEAP-~k~qQ~~~I~~~Gp~ 253 (254)
..+++--++|++.||-+++-|=-..|-.+.++|..|.+..++- +|-|+= ....+......+|.+
T Consensus 147 ~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vP-VI~eGGI~TPsDAa~AmeLGAd 211 (265)
T 1wv2_A 147 IIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVP-VLVDAGVGTASDAAIAMELGCE 211 (265)
T ss_dssp HHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSC-BEEESCCCSHHHHHHHHHHTCS
T ss_pred HHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCC-EEEeCCCCCHHHHHHHHHcCCC
Confidence 6788888999999999997332244556799999998865543 777865 444667766666654
No 289
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=72.59 E-value=3 Score=36.08 Aligned_cols=95 Identities=12% Similarity=0.036 Sum_probs=64.1
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCc-HHHHHHHhCCchHHHHHHHHHHcCCCE
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gt-l~E~a~~qg~~~~~~yl~~~k~lGF~~ 117 (254)
.+....++++.+++|+|++|++..-..-+..+. |+.++++|..+..-- +. -.|+.+..|++.+.++|.|+
T Consensus 15 ~l~~~~~~v~~~~~~v~~~Kv~~d~~~~~G~~~----v~~lr~~~~~v~lD~kl~-----Dip~t~~~~~~~~~~~Gad~ 85 (246)
T 2yyu_A 15 SKQEVERFLRPFAGTPLFVKVGMELYYQEGPAI----VAFLKEQGHAVFLDLKLH-----DIPNTVKQAMKGLARVGADL 85 (246)
T ss_dssp SHHHHHHHHGGGTTSCCEEEECHHHHHHHTHHH----HHHHHHTTCEEEEEEEEC-----SCHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHhcccccEEEeCHHHHHHhCHHH----HHHHHHCCCeEEEEeecc-----cchHHHHHHHHHHHhcCCCE
Confidence 457778899999999999999987654444443 444566655444321 21 12345667889999999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHH---cCCc
Q 025344 118 IELNVGSLEIPEETLLRYVRLVKS---AGLK 145 (254)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~---~G~~ 145 (254)
|-|+-- ...+.-.++++.+++ .|.+
T Consensus 86 vTvH~~---~g~~~l~~~~~~~~~~~~~G~~ 113 (246)
T 2yyu_A 86 VNVHAA---GGRRMMEAAIEGLDAGTPSGRM 113 (246)
T ss_dssp EEEEGG---GCHHHHHHHHHHHHHHSCSSSC
T ss_pred EEEECC---CCHHHHHHHHHHHHhhcccCCc
Confidence 999853 334544578888887 5643
No 290
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=72.56 E-value=3.8 Score=38.33 Aligned_cols=47 Identities=11% Similarity=0.161 Sum_probs=36.9
Q ss_pred HHHHHHcCCCEEEecCCcc---------------------cC-----ChhHHHHHHHHHHHcCCcccceeeee
Q 025344 107 VEDCKQVGFDTIELNVGSL---------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti---------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
|+++++|||++|+++==+- .+ +.++..++|+.+.++|++|+-.+-..
T Consensus 49 LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (484)
T 2aaa_A 49 LDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPD 121 (484)
T ss_dssp HHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred HHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 6788999999999872111 11 36899999999999999999887664
No 291
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=72.11 E-value=3.8 Score=39.64 Aligned_cols=46 Identities=13% Similarity=0.229 Sum_probs=35.8
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
|+++|+|||++|+++- |.-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 178 LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 241 (583)
T 1ea9_C 178 LDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVF 241 (583)
T ss_dssp HHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCC
T ss_pred hHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 6788999999999973 21111 3689999999999999999866543
No 292
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=71.84 E-value=4.4 Score=34.18 Aligned_cols=109 Identities=13% Similarity=0.127 Sum_probs=64.7
Q ss_pred HHHHHHhhccc-ccEEeecCcccccCChhHHHHHHHHHHhCCceecCCc-------HH---HHHHHhCCchHHHHHHHHH
Q 025344 43 LEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-------WA---EHLIRNGPSAFKEYVEDCK 111 (254)
Q Consensus 43 ~~DlLe~ag~y-ID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gt-------l~---E~a~~qg~~~~~~yl~~~k 111 (254)
+++.++.+.+. +|.+=+......-.+...+++..++++++|+.+...+ +. +....+..+.+++.++.|+
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~ 98 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCH 98 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45555554443 6777776654333333568899999999999665421 21 1111111126899999999
Q ss_pred HcCCCEEEecC----Cc--c--c-CChhHHH-------HHHHHHHHcCCcccceee
Q 025344 112 QVGFDTIELNV----GS--L--E-IPEETLL-------RYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 112 ~lGF~~IEISd----Gt--i--~-i~~~~r~-------~lI~~~~~~G~~v~~E~g 151 (254)
++|.+.|=++- |. . . -..+.+. ++.+.+++.|.++.-|..
T Consensus 99 ~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~ 154 (290)
T 2qul_A 99 LLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVV 154 (290)
T ss_dssp HHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECC
T ss_pred HcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 99999997642 43 1 1 1223333 344556677887666643
No 293
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=71.78 E-value=15 Score=30.82 Aligned_cols=101 Identities=13% Similarity=0.148 Sum_probs=62.1
Q ss_pred HHHHHHHhhccc-ccEEeecCcccccCChhHHHHHHHHHHhCCceecC-----CcHHH-----------HHHHhCCchHH
Q 025344 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-----GDWAE-----------HLIRNGPSAFK 104 (254)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~-----Gtl~E-----------~a~~qg~~~~~ 104 (254)
.+++.++.+.+. .|.+=+.+- ++. .+++.-++++++|+.+.. +.|.. ..-.. +.++
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~~~~ 96 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFP----YDF-DADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFR--DNVD 96 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCC----TTS-CHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHH--HHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCC----ccC-CHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHH--HHHH
Confidence 345555544444 677766541 222 378888999999997653 23321 01111 2588
Q ss_pred HHHHHHHHcCCCEEEecCCccc--CCh--------hHHHHHHHHHHHcCCccccee
Q 025344 105 EYVEDCKQVGFDTIELNVGSLE--IPE--------ETLLRYVRLVKSAGLKAKPKF 150 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~--i~~--------~~r~~lI~~~~~~G~~v~~E~ 150 (254)
+.++.|+.+|.+.|-+..| .. .+. +...++.+.+++.|+++.-|.
T Consensus 97 ~~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 151 (269)
T 3ngf_A 97 IALHYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLVEP 151 (269)
T ss_dssp HHHHHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECC
T ss_pred HHHHHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEee
Confidence 9999999999999999777 32 221 122345556777788766664
No 294
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=71.76 E-value=10 Score=32.49 Aligned_cols=123 Identities=15% Similarity=0.184 Sum_probs=75.1
Q ss_pred hHHHHHHHhhcc---cccE-EeecCcccccCChhHHHHHHHHHHhCCc----eecC-C-cHHHHHHHhCCc---------
Q 025344 41 NVLEDIFESMGQ---FVDG-LKFSGGSHSLMPKPFIEEVVKRAHQHDV----YVST-G-DWAEHLIRNGPS--------- 101 (254)
Q Consensus 41 ~~~~DlLe~ag~---yID~-lKfg~GT~~l~~~~~l~eKi~l~~~~gV----~v~~-G-tl~E~a~~qg~~--------- 101 (254)
..|+++|+.+.+ ++.+ +|-.... .-.+..++..+++.++++. .++. - ..+..+-...|+
T Consensus 86 ptL~evl~~~~~~~~~l~iEiK~~~~~--~~~~~~~~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~ 163 (250)
T 3ks6_A 86 MTLEELCALYVDSHVNFRCEIKPGVDG--LPYEGFVALVIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPS 163 (250)
T ss_dssp EEHHHHHHHHTTCSCEEEEEECCCTTS--CCCTTHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHH
T ss_pred cCHHHHHHHHhccCcEEEEEeCCCccc--CcchHHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEecc
Confidence 467888887742 1111 4542211 1123457777788888764 2222 2 234444333322
Q ss_pred -----hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCC
Q 025344 102 -----AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (254)
Q Consensus 102 -----~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~ 176 (254)
.++++.+.++.+|++.+-.+...++ .++|+.+++.|++|.+ .++ .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~G~~V~~-WTv----------n------------- 213 (250)
T 3ks6_A 164 VLQQLGPGAVIETAIAHSIHEIGVHIDTAD------AGLMAQVQAAGLDFGC-WAA----------H------------- 213 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEGGGCC------HHHHHHHHHTTCEEEE-ECC----------C-------------
T ss_pred cccccchhHHHHHHHhcCCCEEecchhhCC------HHHHHHHHHCCCEEEE-EeC----------C-------------
Confidence 2456778889999999877654332 4789999999988765 233 1
Q ss_pred ccccccCHHHHHHHHHHHHHcCCcEEEEe
Q 025344 177 STEYVEDVDLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 177 ~~~~~~d~~~~i~~~~~dLeAGA~~ViiE 205 (254)
+ .+.+++.++.|+|.||..
T Consensus 214 ------~----~~~~~~l~~~GVDgIiTD 232 (250)
T 3ks6_A 214 ------T----PSQITKALDLGVKVFTTD 232 (250)
T ss_dssp ------S----HHHHHHHHHHTCSEEEES
T ss_pred ------C----HHHHHHHHHcCCCEEEcC
Confidence 1 356778899999999976
No 295
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=71.64 E-value=12 Score=35.30 Aligned_cols=65 Identities=22% Similarity=0.273 Sum_probs=44.5
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCcccccc
Q 025344 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~ 182 (254)
.++++.+-+.|.+.|.|....- . .+...+.|+.+++. |..|+. | .+ .
T Consensus 146 ~e~~~~lveaGvdvIvldta~G-~-~~~~~e~I~~ik~~~~i~Vi~--g------~V-----------~----------- 193 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHG-H-SLNIIRTLKEIKSKMNIDVIV--G------NV-----------V----------- 193 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCC-S-BHHHHHHHHHHHTTCCCEEEE--E------EE-----------C-----------
T ss_pred HHHHHHHHHcCCCEEEEeCCCC-C-cccHHHHHHHHHhcCCCeEEE--e------ec-----------C-----------
Confidence 5789999999999999832221 1 24446788888875 444332 1 01 1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEE
Q 025344 183 DVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~Vii 204 (254)
+ .+.++..++||||.|++
T Consensus 194 t----~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 194 T----EEATKELIENGADGIKV 211 (400)
T ss_dssp S----HHHHHHHHHTTCSEEEE
T ss_pred C----HHHHHHHHHcCCCEEEE
Confidence 1 66778889999999999
No 296
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=71.51 E-value=40 Score=30.24 Aligned_cols=140 Identities=12% Similarity=0.091 Sum_probs=0.0
Q ss_pred chhHHHHHHHhhccc-ccEEeecCcccccCChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCC
Q 025344 39 SHNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (254)
Q Consensus 39 g~~~~~DlLe~ag~y-ID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~G-tl~E~a~~qg~~~~~~yl~~~k~lGF~ 116 (254)
+...+.+.++...++ +|++=+-||.-.-.....+.--..+. ++|+.+.+= |.-- .++..+++.+..++++|++
T Consensus 27 ~~~~l~~~~~~L~~~~pd~vsVT~~~~g~~r~~t~~~a~~i~-~~g~~~i~Hltc~~----~~~~~l~~~L~~~~~~GI~ 101 (310)
T 3apt_A 27 GEEALFRTLEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQ-SLGLNPLAHLTVAG----QSRKEVAEVLHRFVESGVE 101 (310)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEECCCSTTCSHHHHHHHHHHHH-HTTCCBCEEEECTT----SCHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHhcCCCCEEEEecCCCCCcchhHHHHHHHHH-HhCCCeEEEeecCC----CCHHHHHHHHHHHHHCCCC
Q ss_pred EEEecCCcccCC----------hhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCccccccCHH
Q 025344 117 TIELNVGSLEIP----------EETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVD 185 (254)
Q Consensus 117 ~IEISdGti~i~----------~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~ 185 (254)
.|=+=.|-..-+ .+.=.+||+.+++. | --..+|+ ...|+ +..-++ +.+
T Consensus 102 niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g--~~f~igv---------A~yPE-~Hp~~~---------~~~ 160 (310)
T 3apt_A 102 NLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYG--DRVSVGG---------AAYPE-GHPESE---------SLE 160 (310)
T ss_dssp EEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHG--GGSEEEE---------EECTT-CCTTSS---------CHH
T ss_pred EEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCC--CCeEEEE---------EeCCC-cCCCCC---------CHH
Q ss_pred HHHHHHHHHHHcCCcEEEE
Q 025344 186 LLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 186 ~~i~~~~~dLeAGA~~Vii 204 (254)
.-++..++=++|||+++|.
T Consensus 161 ~d~~~Lk~Kv~aGAdf~iT 179 (310)
T 3apt_A 161 ADLRHFKAKVEAGLDFAIT 179 (310)
T ss_dssp HHHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEe
No 297
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=71.49 E-value=12 Score=35.54 Aligned_cols=154 Identities=14% Similarity=0.179 Sum_probs=98.5
Q ss_pred ChhHHHHHHHHHHhCCce---ecC----C-cH------HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc------ccC
Q 025344 68 PKPFIEEVVKRAHQHDVY---VST----G-DW------AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS------LEI 127 (254)
Q Consensus 68 ~~~~l~eKi~l~~~~gV~---v~~----G-tl------~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt------i~i 127 (254)
+..+..--..++++.+|+ |.. | ++ .|-|.. +.++.+..|-+.||+.|=|.-.. +++
T Consensus 61 ~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w~~~~~~~am~----~a~e~i~~aI~aGFtSVMiD~S~~~~~~~~pl 136 (420)
T 2fiq_A 61 PADFREFVFAIADKVGFARERIILGGDHLGPNCWQQENVDAAME----KSVELVKAYVRAGFSKIHLDASMSCAGDPIPL 136 (420)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGGTTSBHHHHHH----HHHHHHHHHHHTTCCEEEECCCSCCBTCCSSC
T ss_pred HHHHHHHHHHHHHHcCcCcceEEEECCCCCCccccccchhhhhh----hHHHHHHHHHHhCCCEEEECCCCCCCCCCCCc
Confidence 456666666788889998 665 2 23 344433 35788889999999999997666 677
Q ss_pred ChhHH----HHHHHHHHHcCCc--ccceeeeecCCCCCCCcccc--cc-ccccccCCCccccccCHHHHHHHHH----HH
Q 025344 128 PEETL----LRYVRLVKSAGLK--AKPKFAVMFNKSDIPSDRDR--AF-GAYVARAPRSTEYVEDVDLLIRRAE----RC 194 (254)
Q Consensus 128 ~~~~r----~~lI~~~~~~G~~--v~~E~g~k~~~s~v~~~~d~--~~-~~~~~~~~~~~~~~~d~~~~i~~~~----~d 194 (254)
++... .++++.+.+. -. +..|+|.--+. +++..++. .. +..+| ||++..+.++ .+
T Consensus 137 ~eNi~~~rt~elv~~Ah~~-~~~~~eaElG~vgG~-Ev~v~~~~~~~~~~~~~T----------~PeeA~~Fve~~~~~~ 204 (420)
T 2fiq_A 137 APETVAERAAVLCFAAESV-ATDCQREQLSYVIGT-EVPVPGGEASAIQSVHIT----------HVEDAANTLRTHQKAF 204 (420)
T ss_dssp CHHHHHHHHHHHHHHHHHH-CCHHHHHHCEEEEEC-SSCC----------CCCC----------CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHH-cccCCcccceEEeee-ecCCCCCcccccCCCCCC----------CHHHHHHHHHHHHHHH
Confidence 77763 4677888776 43 55666654221 21100110 00 01122 6777766666 44
Q ss_pred HHcCCcE----EE-Ee-c----ccccccCCCccHHHHHHHHhccCCCceEEecC
Q 025344 195 LEAGADM----IM-ID-S----DDVCKHADSLRADIIAKVIGRLGLEKTMFEAT 238 (254)
Q Consensus 195 LeAGA~~----Vi-iE-a----rgi~d~~g~~r~d~i~~ii~~l~~~klifEAP 238 (254)
-+.|.|. || += + -|.| +...++.+.+.+|-+.++.-.|.+||=
T Consensus 205 ~~tGvd~~~~~vi~LAV~iGt~HG~y-~~~~ld~e~l~~I~~~v~~P~LVle~H 257 (420)
T 2fiq_A 205 IARGLTEALTRVIAIVVQPGVEFDHS-NIIHYQPQEAQALAQWIENTRMVYEAH 257 (420)
T ss_dssp HTTTCHHHHHTEEEEECCCSCEECSS-CEECCCGGGGHHHHHHHTTSSCEEEES
T ss_pred HhhCCCcccccceEEEEeCCccCCCC-CCCCcCHHHHHHHHHhcCCCCEEEecC
Confidence 4689888 44 22 1 2788 678899999999998888766889874
No 298
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=71.48 E-value=34 Score=32.72 Aligned_cols=104 Identities=12% Similarity=0.107 Sum_probs=66.4
Q ss_pred HHHHHHHhhcccccEEeecCcc-cccCChhHHHHHHHHHHhCCceecC--Cc--HHHH----HHHhCC------------
Q 025344 42 VLEDIFESMGQFVDGLKFSGGS-HSLMPKPFIEEVVKRAHQHDVYVST--GD--WAEH----LIRNGP------------ 100 (254)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GT-~~l~~~~~l~eKi~l~~~~gV~v~~--Gt--l~E~----a~~qg~------------ 100 (254)
.++++++.+| ++.+|+...- ....+.+.|++.++.++++|+.+.. .. ..+. +...|.
T Consensus 152 ~~~~l~~~~G--~~~iki~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~ 229 (559)
T 2fty_A 152 QLQAAYNDYG--VSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPS 229 (559)
T ss_dssp HHHHHHHHHC--CCEEEEESSSTTTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTTHHHHTSCH
T ss_pred HHHHHHHHCC--CCEEEEEecCCCCcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcCCCChhhcccCCCH
Confidence 3444553344 6888976532 1456778899999999999987764 32 2221 233331
Q ss_pred ----chHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 025344 101 ----SAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 101 ----~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
..+.+.+..++.+|.. +-|. -++.++=.++|+++++.|..|..|+-.
T Consensus 230 ~~E~~av~~~i~la~~~g~~-vhi~----H~s~~~~~~~i~~ak~~G~~Vt~e~~p 280 (559)
T 2fty_A 230 IVEGEATNRAITLATTMDTP-ILFV----HVSSPQAAEVIKQAQTKGLKVYAETCP 280 (559)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-EEEC----SCCCHHHHHHHHHHHHTTCCEEEEECH
T ss_pred HHHHHHHHHHHHHHHHhCCC-EEEE----cCCCHHHHHHHHHHHHcCCceEEeecC
Confidence 1456667778888876 3342 334455579999999999988666644
No 299
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=71.42 E-value=2.3 Score=36.61 Aligned_cols=95 Identities=8% Similarity=0.040 Sum_probs=64.5
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCc-HHHHHHHhCCchHHHHHHHHHHcCCCE
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gt-l~E~a~~qg~~~~~~yl~~~k~lGF~~ 117 (254)
.+....++++.+|+|+|++|++..-..-+..+.++ .++++|..+..-- +. -.|+.+..|++.+.++|.|+
T Consensus 14 ~l~~~~~~~~~~~~~v~~~Kv~~d~~~~~G~~~v~----~l~~~~~~v~lD~kl~-----Dip~t~~~~~~~~~~~Gad~ 84 (239)
T 1dbt_A 14 SAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVK----QLKERNCELFLDLKLH-----DIPTTVNKAMKRLASLGVDL 84 (239)
T ss_dssp SHHHHHHHTGGGTTSCCEEEECHHHHHHHTHHHHH----HHHHTTCEEEEEEEEC-----SCHHHHHHHHHHHHTTTCSE
T ss_pred CHHHHHHHHHHhcccCcEEEECHHHHHHhCHHHHH----HHHHCCCcEEEEeccc-----cchHHHHHHHHHHHhcCCCE
Confidence 45677888899999999999998776545444443 4455555444321 21 12345667999999999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHc---CCc
Q 025344 118 IELNVGSLEIPEETLLRYVRLVKSA---GLK 145 (254)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~---G~~ 145 (254)
|-|+-- ...+...++++.+++. |.+
T Consensus 85 vtvH~~---~g~~~l~~~~~~~~~~~~~g~~ 112 (239)
T 1dbt_A 85 VNVHAA---GGKKMMQAALEGLEEGTPAGKK 112 (239)
T ss_dssp EEEEGG---GCHHHHHHHHHHHHHHSCTTSC
T ss_pred EEEeCc---CCHHHHHHHHHHHHhhhccCCC
Confidence 999853 2344445788888876 654
No 300
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=71.39 E-value=26 Score=28.99 Aligned_cols=94 Identities=13% Similarity=0.062 Sum_probs=61.2
Q ss_pred ccEEeecCccc--ccCChhHHHHHHHHHHhCCceecC-Cc--HH----HHHHHhCCchHHHHHHHHHHcCCCEEEecCCc
Q 025344 54 VDGLKFSGGSH--SLMPKPFIEEVVKRAHQHDVYVST-GD--WA----EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS 124 (254)
Q Consensus 54 ID~lKfg~GT~--~l~~~~~l~eKi~l~~~~gV~v~~-Gt--l~----E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt 124 (254)
.|.+=+..... ...+...+++.-++++++|+.+.. .+ .+ +. ..+ .+++.++.|+++|.+.|=+..|.
T Consensus 33 ~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~-~~~---~~~~~i~~a~~lG~~~v~~~~g~ 108 (272)
T 2q02_A 33 FNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEE-VVK---KTEGLLRDAQGVGARALVLCPLN 108 (272)
T ss_dssp CCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHH-HHH---HHHHHHHHHHHHTCSEEEECCCC
T ss_pred CCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHH-HHH---HHHHHHHHHHHhCCCEEEEccCC
Confidence 45555543221 222345588888999999998743 22 11 22 222 78999999999999999987665
Q ss_pred ccCC------hhHHHHHHHHHHHcCCcccceee
Q 025344 125 LEIP------EETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 125 i~i~------~~~r~~lI~~~~~~G~~v~~E~g 151 (254)
..-. .+...++.+.+++.|.++.-|-.
T Consensus 109 ~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~ 141 (272)
T 2q02_A 109 DGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPL 141 (272)
T ss_dssp SSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred CchhHHHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 3210 34445667778888988777754
No 301
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=71.20 E-value=8.6 Score=33.88 Aligned_cols=137 Identities=14% Similarity=0.150 Sum_probs=78.7
Q ss_pred CChhHHHHHHHHHHhCCc-eec-CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCC
Q 025344 67 MPKPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (254)
Q Consensus 67 ~~~~~l~eKi~l~~~~gV-~v~-~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~ 144 (254)
++.+.+.+.++.+.++|+ .++ .||- .-.+ + .+.+.+.++.+++.|+ .|.+|.|.+ +. +.++++++.|+
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe-~p~~-~-~~~~~~li~~i~~~~~-~i~~s~g~l--~~----e~l~~L~~ag~ 153 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGE-DPYX-M-PDVISDIVKEIKKMGV-AVTLSLGEW--PR----EYYEKWKEAGA 153 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESC-CGGG-T-THHHHHHHHHHHTTSC-EEEEECCCC--CH----HHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCC-CCCc-c-HHHHHHHHHHHHhcCc-eEEEecCCC--CH----HHHHHHHHhCC
Confidence 456668888888888887 333 3432 0111 2 2378899999999865 566888765 22 45667777887
Q ss_pred cccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHH--
Q 025344 145 KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIA-- 222 (254)
Q Consensus 145 ~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~-- 222 (254)
...+ ++.+.. .+... ..+.+ ..+.+++++.++..-++|-. +.+--++.-.|+=.+++.+
T Consensus 154 ~~v~-i~let~-------~~~~~-~~i~~-------~~~~~~~~~~i~~~~~~Gi~---v~~~~i~G~p~et~e~~~~~~ 214 (348)
T 3iix_A 154 DRYL-LRHETA-------NPVLH-RKLRP-------DTSFENRLNCLLTLKELGYE---TGAGSMVGLPGQTIDDLVDDL 214 (348)
T ss_dssp CEEE-CCCBCS-------CHHHH-HHHST-------TSCHHHHHHHHHHHHHTTCE---EEECBEESCTTCCHHHHHHHH
T ss_pred CEEe-eeeeeC-------CHHHH-HHhCC-------CcCHHHHHHHHHHHHHhCCe---eccceEEeCCCCCHHHHHHHH
Confidence 6555 565421 11110 11211 22689999999999999963 4444444332332233322
Q ss_pred HHHhccCCCc
Q 025344 223 KVIGRLGLEK 232 (254)
Q Consensus 223 ~ii~~l~~~k 232 (254)
..+..++++.
T Consensus 215 ~~l~~l~~~~ 224 (348)
T 3iix_A 215 LFLKEHDFDM 224 (348)
T ss_dssp HHHHHHTCSE
T ss_pred HHHHhcCCCE
Confidence 2335555554
No 302
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A*
Probab=71.19 E-value=4.9 Score=40.27 Aligned_cols=85 Identities=18% Similarity=0.335 Sum_probs=53.1
Q ss_pred ccccEEeecCcccccCChhHHHHHHHHHHhCCceecC--------C-c---HHHHHHHhCC----chHHHHHHHHHHcCC
Q 025344 52 QFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST--------G-D---WAEHLIRNGP----SAFKEYVEDCKQVGF 115 (254)
Q Consensus 52 ~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~--------G-t---l~E~a~~qg~----~~~~~yl~~~k~lGF 115 (254)
+|||..=. | +-|.|. ..=|+.||+|||+|.. | + |++-++.++. .-+++.++.|+.+||
T Consensus 89 ~yvD~fvy-f--h~l~P~---~~widaAHrnGV~VlGT~~fe~~~~~~~~~~~~~lL~~~~~~~~~~a~kLv~la~~yGF 162 (653)
T 2w91_A 89 QYLDSMVF-W--EGLVPT---PDVIDAGHRNGVPVYGTLFFNWSNSIADQERFAEALKQDADGSFPIARKLVDMAKYYGY 162 (653)
T ss_dssp GGCSEEEE-T--TCSSCC---HHHHHHHHHTTCCEEEEEEEEEECCHHHHHHHHHHTCCCTTSCCHHHHHHHHHHHHHTC
T ss_pred cccceeec-c--cccCCC---cHHHHHHHHCCCEEEEEEecCcccCCcHHHHHHHHhccCccchHHHHHHHHHHHHHhCC
Confidence 57886542 5 455443 4678999999998872 1 1 4555664432 137999999999999
Q ss_pred CEEEecCCcc-cCChh---HHHHHHHHHHHc
Q 025344 116 DTIELNVGSL-EIPEE---TLLRYVRLVKSA 142 (254)
Q Consensus 116 ~~IEISdGti-~i~~~---~r~~lI~~~~~~ 142 (254)
|.+=|+-=+- .++.+ ....+++.+++.
T Consensus 163 DGw~IN~E~~~~~~~~~~~~l~~F~~~L~~~ 193 (653)
T 2w91_A 163 DGYFINQETTGDLVKPLGEKMRQFMLYSKEY 193 (653)
T ss_dssp CEEEEEEEECSTTTGGGHHHHHHHHHHHHHH
T ss_pred CceEEeecccCCCCHHHHHHHHHHHHHHHHH
Confidence 9876654431 13333 333455555553
No 303
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=71.13 E-value=19 Score=33.25 Aligned_cols=24 Identities=13% Similarity=0.072 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecc
Q 025344 184 VDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 184 ~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
.++.++.++..-++|+++|-+=++
T Consensus 241 ~~~~~~la~~l~~~Gvd~i~v~~~ 264 (362)
T 4ab4_A 241 AETFTYVARELGKRGIAFICSRER 264 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCEEEECCC
Confidence 566788888888899999987554
No 304
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=70.83 E-value=12 Score=34.81 Aligned_cols=25 Identities=12% Similarity=0.097 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHHHcC------CcEEEEecc
Q 025344 183 DVDLLIRRAERCLEAG------ADMIMIDSD 207 (254)
Q Consensus 183 d~~~~i~~~~~dLeAG------A~~ViiEar 207 (254)
+.++.++.++..-++| +++|-+=++
T Consensus 258 ~~~~~~~la~~le~~G~~gg~~vd~i~v~~~ 288 (402)
T 2hsa_B 258 PLSLGLAVVERLNKIQLHSGSKLAYLHVTQP 288 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCSEEEEECC
T ss_pred CHHHHHHHHHHHHhcCCccCCceEEEEEecC
Confidence 4677888888888999 999988554
No 305
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=70.68 E-value=3.3 Score=41.31 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=37.0
Q ss_pred HHHHHHHHcCCCEEEecC------------------Ccc-----------cCC-------hhHHHHHHHHHHHcCCcccc
Q 025344 105 EYVEDCKQVGFDTIELNV------------------GSL-----------EIP-------EETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISd------------------Gti-----------~i~-------~~~r~~lI~~~~~~G~~v~~ 148 (254)
+-|+++|+|||++|+++= |.- ..+ .++..++|+.+.++|++|+-
T Consensus 255 ~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIl 334 (718)
T 2e8y_A 255 SGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVIL 334 (718)
T ss_dssp CHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSEEEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhHHHHHcCCCEEEECCccccCccccccccccCcCCCCccCCCCcCcccccCCCCccccHHHHHHHHHHHHHCCCEEEE
Confidence 457888999999999971 111 111 48999999999999999987
Q ss_pred eeee
Q 025344 149 KFAV 152 (254)
Q Consensus 149 E~g~ 152 (254)
.+-.
T Consensus 335 DvV~ 338 (718)
T 2e8y_A 335 DVVF 338 (718)
T ss_dssp EECT
T ss_pred EEec
Confidence 7655
No 306
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=70.67 E-value=6.5 Score=36.37 Aligned_cols=50 Identities=12% Similarity=0.166 Sum_probs=38.1
Q ss_pred chHHHHHHHHHHcCCCEEEecCCccc---C---------------C---hhHHHHHHHHHHHcCCcccceee
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGSLE---I---------------P---EETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~---i---------------~---~~~r~~lI~~~~~~G~~v~~E~g 151 (254)
..+++.++.+|++||++|-++ ++-. + + .+..-++|..|.++|++|+-++.
T Consensus 62 ~~~~~dl~~~k~~G~N~vR~~-~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~ 132 (440)
T 1uuq_A 62 DRLAKELDNLKAIGVNNLRVL-AVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFN 132 (440)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE-CCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEC-cccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 468999999999999999998 2211 1 1 12223799999999999998875
No 307
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=70.64 E-value=27 Score=32.64 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=36.1
Q ss_pred HHHHHHHHHHcCCcEEEEec-----ccccccCCCccHHHHHHHHhcc
Q 025344 187 LIRRAERCLEAGADMIMIDS-----DDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 187 ~i~~~~~dLeAGA~~ViiEa-----rgi~d~~g~~r~d~i~~ii~~l 228 (254)
+...+...+++||+-+|||- +-.+|..-.+..+.+.++++.+
T Consensus 328 v~~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~~sl~p~el~~lv~~i 374 (385)
T 3nvt_A 328 LLPCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAI 374 (385)
T ss_dssp HHHHHHHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEecCChhhcCCcccccCCHHHHHHHHHHH
Confidence 34678889999999999998 3679999999999999998765
No 308
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=70.57 E-value=7.1 Score=34.14 Aligned_cols=50 Identities=20% Similarity=0.285 Sum_probs=31.8
Q ss_pred HHHHHHHHHHcCCCEEEecCC---------cccCCh---hHHHHHHHHHHHcCCcccceeee
Q 025344 103 FKEYVEDCKQVGFDTIELNVG---------SLEIPE---ETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdG---------ti~i~~---~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
.++.++.+|++||++|-|+-+ .-.+++ +...++|+.+.++|++|+-.++-
T Consensus 43 ~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~ 104 (320)
T 3nco_A 43 EDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHH 104 (320)
T ss_dssp CHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 367777888888888887621 122332 33456777788888887766553
No 309
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=70.49 E-value=16 Score=31.13 Aligned_cols=100 Identities=10% Similarity=-0.018 Sum_probs=60.0
Q ss_pred ceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCc-HHHHHHHhCCchHH
Q 025344 26 VTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFK 104 (254)
Q Consensus 26 lT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gt-l~E~a~~qg~~~~~ 104 (254)
|=+=+|.- .+....++++..++++|++|+|.+-..-+..+.+++.-+.+. |-.++.-- |..+ =.
T Consensus 8 livAlD~~-----~~~~a~~~~~~~~~~~~~ikvg~~lf~~~G~~~v~~l~~~~p--~~~iflDlKl~Di--------p~ 72 (221)
T 3exr_A 8 LQVALDHS-----NLKGAITAAVSVGNEVDVIEAGTVCLLQVGSELVEVLRSLFP--DKIIVADTKCADA--------GG 72 (221)
T ss_dssp EEEEECCS-----SHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHHHHCT--TSEEEEEEEECSC--------HH
T ss_pred EEEEeCCC-----CHHHHHHHHHhhCCCceEEEECHHHHHhcCHHHHHHHHHhCC--CCcEEEEEEeecc--------HH
Confidence 44445543 567888999999999999999888776666665555333211 33333210 1111 11
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcC
Q 025344 105 EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAG 143 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G 143 (254)
.+.+.+.++|.+.|-|.... +.+.-.++++.+++.|
T Consensus 73 t~~~~~~~~Gad~vtVH~~~---g~~~l~~a~~~~~~~g 108 (221)
T 3exr_A 73 TVAKNNAVRGADWMTCICSA---TIPTMKAARKAIEDIN 108 (221)
T ss_dssp HHHHHHHTTTCSEEEEETTS---CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEEEeccC---CHHHHHHHHHHHHhcC
Confidence 12233577899998885432 2345567777777766
No 310
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=70.46 E-value=30 Score=30.57 Aligned_cols=69 Identities=17% Similarity=0.292 Sum_probs=45.2
Q ss_pred chhHHHHHHHhhcccc-cEEeecCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 025344 39 SHNVLEDIFESMGQFV-DGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (254)
Q Consensus 39 g~~~~~DlLe~ag~yI-D~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~ 117 (254)
......++++..++|+ +++|.|. |.++..| .+.++++++.||..
T Consensus 15 ~~~~al~l~~~l~~~v~~~~KvG~-------------------------------~l~~~~G----~~~v~~Lk~~g~~V 59 (259)
T 3tfx_A 15 NEEQLNKILSKLGDPHDVFVKVGM-------------------------------ELFYNAG----IDVIKKLTQQGYKI 59 (259)
T ss_dssp CHHHHHHHHHTTCCGGGCEEEECH-------------------------------HHHHHHC----HHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHhCcccceEEEeCH-------------------------------HHHHhcC----HHHHHHHHHCCCcE
Confidence 5678899999999999 9999994 3344555 24556667777754
Q ss_pred EEecCCcccCChhHHHHHHHHHHHcCC
Q 025344 118 IELNVGSLEIPEETLLRYVRLVKSAGL 144 (254)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~G~ 144 (254)
+ ..--+-+||+-... ..+.+.+.|.
T Consensus 60 f-lDlK~~DIpnTv~~-a~~~~~~~ga 84 (259)
T 3tfx_A 60 F-LDLKMHDIPNTVYN-GAKALAKLGI 84 (259)
T ss_dssp E-EEEEECSCHHHHHH-HHHHHHTTTC
T ss_pred E-EEecccccchHHHH-HHHHHHhcCC
Confidence 3 34445678876553 3455555443
No 311
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=70.08 E-value=18 Score=33.28 Aligned_cols=24 Identities=4% Similarity=-0.064 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecc
Q 025344 184 VDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 184 ~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
.++.++.++..-++|+++|-+=++
T Consensus 249 ~~~~~~la~~l~~~Gvd~i~v~~~ 272 (361)
T 3gka_A 249 AATFGHVARELGRRRIAFLFARES 272 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCC
Confidence 567788888888999999987553
No 312
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=70.03 E-value=14 Score=34.28 Aligned_cols=26 Identities=8% Similarity=-0.061 Sum_probs=21.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeccc
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDD 208 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEarg 208 (254)
+.++.++.++..-++|+++|-+=+++
T Consensus 264 ~~~~~~~la~~l~~~Gvd~i~v~~~~ 289 (379)
T 3aty_A 264 PEALTKHLCKKIEPLSLAYLHYLRGD 289 (379)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEECSC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 46788888988889999999887653
No 313
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=69.82 E-value=3.3 Score=32.48 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=36.5
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccc
Q 025344 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (254)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~ 147 (254)
++.+.+.+++|.++|..+|=+|.|+.+ .++.+.++++|++++
T Consensus 68 ~~~v~~~v~e~~~~g~k~v~~~~G~~~------~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 68 PQNQLSEYNYILSLKPKRVIFNPGTEN------EELEEILSENGIEPV 109 (122)
T ss_dssp HHHHGGGHHHHHHHCCSEEEECTTCCC------HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCh------HHHHHHHHHcCCeEE
Confidence 346889999999999999999999853 488999999999987
No 314
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=69.76 E-value=8.5 Score=35.12 Aligned_cols=50 Identities=16% Similarity=0.235 Sum_probs=39.2
Q ss_pred HHHHHHHHHcCCCEEEec---------CCc------ccCChhHHHHHHHHHHHcCCcccceeeee
Q 025344 104 KEYVEDCKQVGFDTIELN---------VGS------LEIPEETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEIS---------dGt------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
.+-++.++++|+++|-|. .+. -+.+.+.-.++|++|+++||+|.-++.+-
T Consensus 56 ~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i~ 120 (343)
T 3civ_A 56 RASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVN 120 (343)
T ss_dssp HHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEEee
Confidence 467888899999999883 111 12467788899999999999998887774
No 315
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=69.74 E-value=3.7 Score=38.72 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=47.9
Q ss_pred HHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----CChhHHHHHHHHHHHcCCcccceeeee
Q 025344 79 AHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----IPEETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 79 ~~~~gV~v~~G-tl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~----i~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
-+..||-|||+ ..+| ...+|++.++++||+.|=-|=-..+ --.+...++++.|++.||+|...+..+
T Consensus 26 M~~LGiSvYp~~~~~~--------~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~ 97 (385)
T 1x7f_A 26 ERKLGISLYPEHSTKE--------KDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPA 97 (385)
T ss_dssp CCEEEEEECGGGSCHH--------HHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHheEEEEcCCCCCHH--------HHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 34578888887 4555 2348999999999998866543332 223556789999999999999887764
No 316
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=69.59 E-value=13 Score=31.24 Aligned_cols=21 Identities=14% Similarity=0.006 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHcCCCEEEecC
Q 025344 102 AFKEYVEDCKQVGFDTIELNV 122 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISd 122 (254)
...+..+.+.+.|.++|.|.+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~ 53 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVD 53 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEec
Confidence 344555677788999999986
No 317
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=69.52 E-value=5.1 Score=38.39 Aligned_cols=48 Identities=23% Similarity=0.299 Sum_probs=36.9
Q ss_pred HHHHHHHHcCCCEEEecC---------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 105 EYVEDCKQVGFDTIELNV---------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISd---------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
+=|+++++|||++|++|- |.-. + +.++..++|+.+.++|++|+-.+-.
T Consensus 36 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 102 (557)
T 1zja_A 36 EKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVI 102 (557)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 346788999999999972 2211 1 3688999999999999999877655
No 318
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=69.22 E-value=12 Score=33.77 Aligned_cols=114 Identities=18% Similarity=0.234 Sum_probs=66.9
Q ss_pred HHHHHHHhCCce------ecCCc--HHHHHHHhCCchHHHHHHHHHHcC-CCEEEecCCcccCChhHHHHHHHHHHHcCC
Q 025344 74 EVVKRAHQHDVY------VSTGD--WAEHLIRNGPSAFKEYVEDCKQVG-FDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (254)
Q Consensus 74 eKi~l~~~~gV~------v~~Gt--l~E~a~~qg~~~~~~yl~~~k~lG-F~~IEISdGti~i~~~~r~~lI~~~~~~G~ 144 (254)
+-++.++..++. ..||. +-.+|+.-|.. ....+| +|+|=|=|.-+..--. -...|+++++...
T Consensus 126 ~~v~~~~g~~~~i~dTRKT~PglR~l~kyAV~~GGg-------~nHR~gL~d~vlikdNHi~~~G~-i~~Av~~ar~~~~ 197 (287)
T 3tqv_A 126 KLVKLISQYKTKLLDTRKTIPGFRLAQKYAVRCGGG-------FNHRIGLFDAYLIKENHIRSAGG-IAKAVTKAKKLDS 197 (287)
T ss_dssp HHHHHHTTSSCEEECCSCCCTTCHHHHHHHHHHTTC-------BCCCSSSSSSEEECTTTC----C-HHHHHHHHHHHCT
T ss_pred HHHHHhCCCCeEEEeecccCcchHHHHHHHHHhcCc-------hheeccCccEEEEeHHHHHHhCC-HHHHHHHHHhhCC
Confidence 445555555663 44674 56667766511 113344 2466666655544332 3367888887644
Q ss_pred cccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHH
Q 025344 145 KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKV 224 (254)
Q Consensus 145 ~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~i 224 (254)
.++-|+-+ .+ .++++..++||||.|+++ |+..+.+.++
T Consensus 198 ~~~IeVEv-----------------------------~t----l~ea~eAl~aGaD~I~LD---------n~~~~~l~~a 235 (287)
T 3tqv_A 198 NKVVEVEV-----------------------------TN----LDELNQAIAAKADIVMLD---------NFSGEDIDIA 235 (287)
T ss_dssp TSCEEEEE-----------------------------SS----HHHHHHHHHTTCSEEEEE---------SCCHHHHHHH
T ss_pred CCcEEEEe-----------------------------CC----HHHHHHHHHcCCCEEEEc---------CCCHHHHHHH
Confidence 33333333 12 478888899999999995 4666778777
Q ss_pred HhccCCCceEEecC
Q 025344 225 IGRLGLEKTMFEAT 238 (254)
Q Consensus 225 i~~l~~~klifEAP 238 (254)
++.+. .++..||.
T Consensus 236 v~~~~-~~v~ieaS 248 (287)
T 3tqv_A 236 VSIAR-GKVALEVS 248 (287)
T ss_dssp HHHHT-TTCEEEEE
T ss_pred HHhhc-CCceEEEE
Confidence 77665 46777775
No 319
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=69.12 E-value=23 Score=30.63 Aligned_cols=103 Identities=10% Similarity=0.094 Sum_probs=64.1
Q ss_pred HHHHHHhhccc-ccEEeecCccc-ccCChhHHHHHHHHHHhCCceecC-C-cHH--------H-----------HHHHhC
Q 025344 43 LEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIEEVVKRAHQHDVYVST-G-DWA--------E-----------HLIRNG 99 (254)
Q Consensus 43 ~~DlLe~ag~y-ID~lKfg~GT~-~l~~~~~l~eKi~l~~~~gV~v~~-G-tl~--------E-----------~a~~qg 99 (254)
+++.|+.+.+. .|.+=+.+... ..++. .+++.-++++++|+.+.. . .++ + -...+
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~~-~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~- 108 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGGV-PMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIME- 108 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETTE-EHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHH-
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCCC-CHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHH-
Confidence 56666665554 66666654221 13333 377888899999997753 2 120 0 11122
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHH-------HHHHHHHHcCCc--ccce
Q 025344 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL-------RYVRLVKSAGLK--AKPK 149 (254)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~-------~lI~~~~~~G~~--v~~E 149 (254)
.+++.++.|++||.+.|=+..+.-.-+.+.+. ++.+.++++|.+ +.-|
T Consensus 109 --~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~E 165 (303)
T 3l23_A 109 --YWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYH 165 (303)
T ss_dssp --HHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred --HHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEc
Confidence 68999999999999999885332223344443 455778888988 7654
No 320
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A
Probab=68.91 E-value=5.5 Score=41.63 Aligned_cols=66 Identities=23% Similarity=0.424 Sum_probs=43.6
Q ss_pred hhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCc-HHH---------HH---HHhCCc----hHHHHHHHHH
Q 025344 49 SMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAE---------HL---IRNGPS----AFKEYVEDCK 111 (254)
Q Consensus 49 ~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gt-l~E---------~a---~~qg~~----~~~~yl~~~k 111 (254)
..=+|||++= .|. . +.|.. .-|+.||+|||+|. || +|| .+ +.++.+ -.++.++.|+
T Consensus 237 ~~WqyVD~fV-YfS-h-~IPp~---~winaAHrnGV~VL-GT~i~ew~~~~~~~~~~~~~L~~d~~g~~~~A~KLveiAk 309 (937)
T 3gdb_A 237 DYWQYLDSMV-FWE-G-LVPTP---DVIDAGHRNGVPVY-GTLFFNWSNSIADQERFAEALKQDADGSFPIARKLVDMAK 309 (937)
T ss_dssp CCGGGCSEEE-ETT-C-SSCCH---HHHHHHHHTTCCEE-EEEEEEEECCHHHHHHHHHHTCCCTTSCCHHHHHHHHHHH
T ss_pred eeccceeeee-ecc-c-ccCCc---hHHHHHHhcCCeEE-EEEecCcccchhhHHHHHHHhccCccchhHHHHHHHHHHH
Confidence 4446899773 353 3 34653 77999999999885 44 233 22 223321 2779999999
Q ss_pred HcCCCE----EEec
Q 025344 112 QVGFDT----IELN 121 (254)
Q Consensus 112 ~lGF~~----IEIS 121 (254)
-+|||. +|..
T Consensus 310 yyGFDGWlINiE~~ 323 (937)
T 3gdb_A 310 YYGYDGYFINQETT 323 (937)
T ss_dssp HHTCCEEEEEEEEC
T ss_pred HcCcCceEeccccc
Confidence 999998 6664
No 321
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=68.87 E-value=5.5 Score=41.10 Aligned_cols=51 Identities=16% Similarity=0.367 Sum_probs=40.4
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------------C-----cccCC---------hhHHHHHHHHHHHcCCcccceee
Q 025344 103 FKEYVEDCKQVGFDTIELNV-----------------G-----SLEIP---------EETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd-----------------G-----ti~i~---------~~~r~~lI~~~~~~G~~v~~E~g 151 (254)
+.+-+.++++|||++|+++= | ...++ .++..++|+.+.++|++|+-.+-
T Consensus 635 i~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~~~Gt~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 635 IAKNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPNKYGTADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp HHHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 44558899999999999972 2 13443 78999999999999999987776
Q ss_pred ee
Q 025344 152 VM 153 (254)
Q Consensus 152 ~k 153 (254)
.-
T Consensus 715 ~N 716 (844)
T 3aie_A 715 PD 716 (844)
T ss_dssp CS
T ss_pred cC
Confidence 63
No 322
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=68.65 E-value=5.1 Score=39.15 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=37.9
Q ss_pred HHHHHHHHcCCCEEEecC--------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeeee
Q 025344 105 EYVEDCKQVGFDTIELNV--------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISd--------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
+=|+++|+||+++|+++= |.- .+ +.++..+||+.+.++|++|+-.+-..
T Consensus 243 ~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~N 309 (645)
T 4aef_A 243 EKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVFH 309 (645)
T ss_dssp HTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEeccc
Confidence 336788999999999973 211 11 46889999999999999999887654
No 323
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=68.61 E-value=3.6 Score=34.07 Aligned_cols=66 Identities=20% Similarity=0.184 Sum_probs=53.1
Q ss_pred HHHHHhCCc-eecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 025344 76 VKRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 76 i~l~~~~gV-~v~~-Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (254)
.++++++|| .+.- |--.++|+.+- .. .+.++||+.+=++|.+-+.+++.....++.+++.|-.+.+
T Consensus 117 ~~~L~~~gi~~lvv~G~~t~~CV~~T--a~-----da~~~G~~v~v~~Da~~~~~~~~~~~al~~m~~~G~~i~~ 184 (186)
T 3gbc_A 117 LNWLRQRGVDEVDVVGIATDHCVRQT--AE-----DAVRNGLATRVLVDLTAGVSADTTVAALEEMRTASVELVC 184 (186)
T ss_dssp HHHHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEEC
T ss_pred HHHHHhcCCCEEEEEEecccHHHHHH--HH-----HHHHCCCeEEEEhhhcCCCCHHHHHHHHHHHHHcCCEEee
Confidence 345677899 4554 77888888885 33 3457999999999999999999999999999998876543
No 324
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=68.50 E-value=22 Score=31.98 Aligned_cols=74 Identities=18% Similarity=0.252 Sum_probs=49.6
Q ss_pred HHHcCCCEEEecCC----------cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccc
Q 025344 110 CKQVGFDTIELNVG----------SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (254)
Q Consensus 110 ~k~lGF~~IEISdG----------ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~ 179 (254)
+.+.||++|=+.|+ +..++.++-+...+.+.+. -+-.+ +-. ++ .++.|
T Consensus 45 ~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~-~~~~~-vva-----D~------pfgsY--------- 102 (275)
T 3vav_A 45 LDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARA-QPRAL-IVA-----DL------PFGTY--------- 102 (275)
T ss_dssp HHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHT-CCSSE-EEE-----EC------CTTSC---------
T ss_pred HHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhc-CCCCC-EEE-----ec------CCCCC---------
Confidence 35789999955443 3468888888888887772 11000 111 11 11222
Q ss_pred cccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 180 YVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 180 ~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
.++++.++.+.+.+++||+.|-+|+-
T Consensus 103 --~s~~~a~~~a~rl~kaGa~aVklEdg 128 (275)
T 3vav_A 103 --GTPADAFASAVKLMRAGAQMVKFEGG 128 (275)
T ss_dssp --SSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred --CCHHHHHHHHHHHHHcCCCEEEECCc
Confidence 15999999999999999999999973
No 325
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=68.44 E-value=9 Score=32.07 Aligned_cols=39 Identities=23% Similarity=0.246 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHcCCCEEEec--CCcc-c-CChhHHHHHHHHHHHc
Q 025344 102 AFKEYVEDCKQVGFDTIELN--VGSL-E-IPEETLLRYVRLVKSA 142 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEIS--dGti-~-i~~~~r~~lI~~~~~~ 142 (254)
.+.+-++.+.+.|.++||+- ||.. . ++ .-.+.++.+++.
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~--~~~~~i~~l~~~ 66 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNIT--IGPLVVDSLRPI 66 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC--CCHHHHHHHGGG
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCcccccc--cCHHHHHHHHhc
Confidence 56777888999999999996 5532 1 22 224667766663
No 326
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=68.15 E-value=7.2 Score=32.14 Aligned_cols=41 Identities=7% Similarity=0.110 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHcCCCEEEecC--CcccCChhHHHHHHHHHHHc
Q 025344 102 AFKEYVEDCKQVGFDTIELNV--GSLEIPEETLLRYVRLVKSA 142 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISd--Gti~i~~~~r~~lI~~~~~~ 142 (254)
.+.+-++.+.+.|.+++++-. |+.......=.++++.+++.
T Consensus 17 ~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~ 59 (220)
T 2fli_A 17 NFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH 59 (220)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh
Confidence 677888899999999977764 77333222114566666664
No 327
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=67.79 E-value=18 Score=31.37 Aligned_cols=161 Identities=14% Similarity=0.172 Sum_probs=82.6
Q ss_pred CceeEecCCCCCCcchhHHHHHHHhhccc-ccEEeecCcccccCChhHHHHHHHHHHhCC---------cee--cCC--c
Q 025344 25 GVTEMRSPHYTLSSSHNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHD---------VYV--STG--D 90 (254)
Q Consensus 25 GlT~V~DkG~~~~~g~~~~~DlLe~ag~y-ID~lKfg~GT~~l~~~~~l~eKi~l~~~~g---------V~v--~~G--t 90 (254)
|...++|=-+.= =++..+...+.+.++ +|++=+ ++....+.++.-++.+++++ |.+ +.. .
T Consensus 59 g~~iflDlK~~D--I~nTv~~~~~~~~~~gad~vTv----h~~~G~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~ 132 (239)
T 3tr2_A 59 GYRIFLDLKFYD--IPQTVAGACRAVAELGVWMMNI----HISGGRTMMETVVNALQSITLKEKPLLIGVTILTSLDGSD 132 (239)
T ss_dssp TCCEEEEEEECS--CHHHHHHHHHHHHHTTCSEEEE----EGGGCHHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHH
T ss_pred CCCEEEEecccc--cchHHHHHHHHHHhCCCCEEEE----eccCCHHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHH
Confidence 555666655311 123444444444444 555544 23455677888888887763 111 122 3
Q ss_pred HHHHHHHhC-CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc-cceeeeecCCCCCCCccccccc
Q 025344 91 WAEHLIRNG-PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA-KPKFAVMFNKSDIPSDRDRAFG 168 (254)
Q Consensus 91 l~E~a~~qg-~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v-~~E~g~k~~~s~v~~~~d~~~~ 168 (254)
|-|.-+... .+.+.++-+.+++.|.+.+-.|. .....||.....+|.. -|=++.+ .+.. +|
T Consensus 133 l~~~g~~~~~~~~v~~~A~~a~~~g~~GvV~s~--------~e~~~ir~~~~~~fl~vtPGIr~~--g~~~---~d---- 195 (239)
T 3tr2_A 133 LKTLGIQEKVPDIVCRMATLAKSAGLDGVVCSA--------QEAALLRKQFDRNFLLVTPGIRLE--TDEK---GD---- 195 (239)
T ss_dssp HHHTTCCSCHHHHHHHHHHHHHHHTCCEEECCH--------HHHHHHHTTCCTTSEEEECCBC-----------------
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECc--------hhHHHHHHhcCCCcEEECCCcCCC--CCCc---Cc----
Confidence 433211100 01455566677788998887772 2335566655556643 3544432 1111 12
Q ss_pred cccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhc
Q 025344 169 AYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 227 (254)
Q Consensus 169 ~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~ 227 (254)
+.+|-..+..++||||++++ +|.||.++.- ...+++|.+.
T Consensus 196 ----------------Q~rv~t~~~~~~aGad~lVv-Gr~I~~a~dp--~~a~~~i~~~ 235 (239)
T 3tr2_A 196 ----------------QKRVMTPRAAIQAGSDYLVI-GRPITQSTDP--LKALEAIDKD 235 (239)
T ss_dssp ------------------CCBCHHHHHHHTCSEEEE-CHHHHTSSSH--HHHHHHHHHH
T ss_pred ----------------ccccCCHHHHHHcCCCEEEE-ChHHhCCCCH--HHHHHHHHHH
Confidence 22344566678899997554 7899987642 3445555443
No 328
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=67.77 E-value=42 Score=31.89 Aligned_cols=55 Identities=25% Similarity=0.262 Sum_probs=30.8
Q ss_pred ccEEeecCcccccCChhHHHHHHHHHHh-C-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 025344 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQ-H-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (254)
Q Consensus 54 ID~lKfg~GT~~l~~~~~l~eKi~l~~~-~-gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (254)
+|++-+... .-+++. +.+.|+-.++ + ++++..|+- .-.+..+.+.+.|.|+|-|+
T Consensus 242 ~d~I~id~a--~g~~~~-~~~~v~~i~~~~p~~~Vi~g~v----------~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 242 VDVVVVDTA--HGHSKG-VIERVRWVKQTFPDVQVIGGNI----------ATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp CSEEEEECS--CCSBHH-HHHHHHHHHHHCTTSEEEEEEE----------CSHHHHHHHHHTTCSEEEEC
T ss_pred cceEEeccc--CCcchh-HHHHHHHHHHHCCCceEEEeee----------CcHHHHHHHHHcCCCEEEEC
Confidence 666666532 233433 4444544444 3 666655420 11233567788999999995
No 329
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=67.71 E-value=23 Score=29.81 Aligned_cols=102 Identities=15% Similarity=0.167 Sum_probs=62.0
Q ss_pred HHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCC---cH-HHHHHHhCCchHHHHHHHHHHcCCCE
Q 025344 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG---DW-AEHLIRNGPSAFKEYVEDCKQVGFDT 117 (254)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~G---tl-~E~a~~qg~~~~~~yl~~~k~lGF~~ 117 (254)
..=+.+..+| +|.+=+. + .++ .+++.-++++++|+.+... ++ -+-...+..+.+++.++.|++||.+.
T Consensus 35 ~~l~~~~~~G--~~~vEl~-~---~~~--~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 106 (301)
T 3cny_A 35 QLLSDIVVAG--FQGTEVG-G---FFP--GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPV 106 (301)
T ss_dssp HHHHHHHHHT--CCEECCC-T---TCC--CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHhC--CCEEEec-C---CCC--CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCE
Confidence 3333444444 4555554 2 134 3788889999999977652 22 22212222236899999999999999
Q ss_pred EEecC------CcccC---------ChhHH-------HHHHHHHHHcCCcccceee
Q 025344 118 IELNV------GSLEI---------PEETL-------LRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 118 IEISd------Gti~i---------~~~~r-------~~lI~~~~~~G~~v~~E~g 151 (254)
|=+.. |...- ..+.+ .++.+.+++.|+++.-|..
T Consensus 107 v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~ 162 (301)
T 3cny_A 107 AVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHH 162 (301)
T ss_dssp EEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 98753 54321 22232 3566677888988777754
No 330
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=67.63 E-value=7 Score=34.70 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=39.5
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceec
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS 87 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~ 87 (254)
......++++..++|++++|.|.--..-+..+.+++..++++.+|..++
T Consensus 42 ~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~v~~L~~~a~~~g~~Vf 90 (260)
T 3eww_A 42 LARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIF 90 (260)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHhCCCceEEEEcHHHHHHhCHHHHHHHHHHHhhcCCeEE
Confidence 5678899999999999999999776666677778887777766676554
No 331
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=67.57 E-value=18 Score=31.90 Aligned_cols=108 Identities=8% Similarity=0.037 Sum_probs=67.0
Q ss_pred CCceeEecCCCCCCcchhHHHHH---HHhhc-ccccEEeecCcccccCChhHHH-HHHHHHHhC-Ccee--cC---CcHH
Q 025344 24 FGVTEMRSPHYTLSSSHNVLEDI---FESMG-QFVDGLKFSGGSHSLMPKPFIE-EVVKRAHQH-DVYV--ST---GDWA 92 (254)
Q Consensus 24 ~GlT~V~DkG~~~~~g~~~~~Dl---Le~ag-~yID~lKfg~GT~~l~~~~~l~-eKi~l~~~~-gV~v--~~---Gtl~ 92 (254)
+|.-+++-+|++. .+....+- +.+.| +.|=.+.=|+-|..=|+.+.+. .-+..+++. |++| ++ +|.-
T Consensus 129 ~~kPV~lk~G~~~--t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~ 206 (262)
T 1zco_A 129 VENPVLLKRGMGN--TIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRR 206 (262)
T ss_dssp SSSCEEEECCTTC--CHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCSG
T ss_pred cCCcEEEecCCCC--CHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCcc
Confidence 5788999999853 23333322 23334 4666666554444455665454 455555554 7755 33 1211
Q ss_pred HHHHHhCCchHHHHHHHHHHcCCC--EEE--------ecCCcccCChhHHHHHHHHHHH
Q 025344 93 EHLIRNGPSAFKEYVEDCKQVGFD--TIE--------LNVGSLEIPEETLLRYVRLVKS 141 (254)
Q Consensus 93 E~a~~qg~~~~~~yl~~~k~lGF~--~IE--------ISdGti~i~~~~r~~lI~~~~~ 141 (254)
+ -+..-...+..+|.+ .|| +|||..+|++++..++++.+++
T Consensus 207 ~--------~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~ 257 (262)
T 1zco_A 207 S--------LVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEA 257 (262)
T ss_dssp G--------GHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHH
T ss_pred c--------hHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHH
Confidence 1 122223336789999 999 5699999999999999998886
No 332
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=67.55 E-value=14 Score=31.18 Aligned_cols=79 Identities=8% Similarity=0.036 Sum_probs=54.7
Q ss_pred hhHHHHHHHHHHhCCceecC-CcHH--------HHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc---CChhH-----
Q 025344 69 KPFIEEVVKRAHQHDVYVST-GDWA--------EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE---IPEET----- 131 (254)
Q Consensus 69 ~~~l~eKi~l~~~~gV~v~~-Gtl~--------E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~---i~~~~----- 131 (254)
...+++.-++++++|+.++. ++++ +.+ . +.+++.++.|+.||.+.|-+..|... .+.+.
T Consensus 47 ~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~-~---~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~ 122 (286)
T 3dx5_A 47 YETTERELNCLKDKTLEITMISDYLDISLSADFEKT-I---EKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYV 122 (286)
T ss_dssp HHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHH-H---HHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHH-H---HHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHH
Confidence 45688888999999996654 2221 211 1 26889999999999999999888653 23323
Q ss_pred --HHHHHHHHHHcCCcccceee
Q 025344 132 --LLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 132 --r~~lI~~~~~~G~~v~~E~g 151 (254)
..++.+.+++.|.++.-|..
T Consensus 123 ~~l~~l~~~a~~~Gv~l~lE~~ 144 (286)
T 3dx5_A 123 NRIRMICELFAQHNMYVLLETH 144 (286)
T ss_dssp HHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHhCCEEEEecC
Confidence 33456677888888777753
No 333
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=67.46 E-value=5.6 Score=39.36 Aligned_cols=46 Identities=20% Similarity=0.273 Sum_probs=36.1
Q ss_pred HHHHHHcCCCEEEecCCcc-------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNVGSL-------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti-------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
|+++++|||++|.++==+- .+ +.++..+||+.+.++|++|+-.+-.
T Consensus 271 LdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~ 334 (696)
T 4aee_A 271 IDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITM 334 (696)
T ss_dssp HHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred hHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 6688999999999973111 11 3688999999999999999877654
No 334
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=67.37 E-value=5.2 Score=37.57 Aligned_cols=63 Identities=19% Similarity=0.219 Sum_probs=44.7
Q ss_pred CceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----CChhHHHHHHHHHHHcCCcccceeeee
Q 025344 83 DVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----IPEETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 83 gV~v~~G-tl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~----i~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
||-|||+ ..+| ...+|++.++++||+.|=-|=-..+ --.+...++++.|++.||+|...+..+
T Consensus 6 GiSvY~~~~~~~--------~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~ 73 (372)
T 2p0o_A 6 GISVFLGEEITN--------DTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGE 73 (372)
T ss_dssp EEECCTTSCCCH--------HHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHH
T ss_pred EEEEcCCCCCHH--------HHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 5667776 3433 3458999999999999876644332 223455688999999999998877764
No 335
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=67.35 E-value=6.2 Score=38.57 Aligned_cols=129 Identities=14% Similarity=0.139 Sum_probs=74.7
Q ss_pred HHHHHHHHcCCCEEEecC----------CcccC----------ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccc
Q 025344 105 EYVEDCKQVGFDTIELNV----------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRD 164 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISd----------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d 164 (254)
+-|+++|+|||++|+++- |.-.. +.++..++|+.+.++|++|+-.+-..+-. . +.
T Consensus 148 ~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~~--~---~~ 222 (602)
T 2bhu_A 148 EKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFG--P---SG 222 (602)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCC--S---SS
T ss_pred HHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEecccccc--c---CC
Confidence 346788999999999862 22221 25889999999999999999887663211 1 11
Q ss_pred ccccc----ccc---cCCCcc----ccccCHHHHHHHHHHHH-HcCCcEEEEecc-cccccC-CCccHHHHHHHHhccCC
Q 025344 165 RAFGA----YVA---RAPRST----EYVEDVDLLIRRAERCL-EAGADMIMIDSD-DVCKHA-DSLRADIIAKVIGRLGL 230 (254)
Q Consensus 165 ~~~~~----~~~---~~~~~~----~~~~d~~~~i~~~~~dL-eAGA~~ViiEar-gi~d~~-g~~r~d~i~~ii~~l~~ 230 (254)
+.+.. ++. +..|.. +...-.+.+++.++..+ +.|+|=.-+.+= .+.+.. ..+-.++.+. +...+-
T Consensus 223 ~~~~~~~~~~~~~~~~~~w~~~ln~~~~~v~~~i~~~~~~W~~~~gvDGfR~D~~~~i~~~~~~~fl~~~~~~-v~~~~~ 301 (602)
T 2bhu_A 223 NYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFDGLRLDATPYMTDDSETHILTELAQE-IHELGG 301 (602)
T ss_dssp CCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCSEEEETTGGGCCCCSSSCHHHHHHHH-HHTTCS
T ss_pred ccccccCcccccCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCEEEEechHhhhccchHHHHHHHHHH-HhhcCC
Confidence 10000 111 122321 11122356777888889 589999999885 343331 1222222222 233344
Q ss_pred CceEEecCC
Q 025344 231 EKTMFEATN 239 (254)
Q Consensus 231 ~klifEAP~ 239 (254)
-.+|-|...
T Consensus 302 ~~li~E~~~ 310 (602)
T 2bhu_A 302 THLLLAEDH 310 (602)
T ss_dssp CCEEEEECS
T ss_pred eEEEEEeCC
Confidence 567778753
No 336
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=67.19 E-value=14 Score=31.73 Aligned_cols=100 Identities=14% Similarity=0.181 Sum_probs=59.2
Q ss_pred HHHHHHHhhccc-ccEEeecCcccc-----cCChhHHHHHHHHHHhCCc-eecC-CcHH--------HHHHHhCCchHHH
Q 025344 42 VLEDIFESMGQF-VDGLKFSGGSHS-----LMPKPFIEEVVKRAHQHDV-YVST-GDWA--------EHLIRNGPSAFKE 105 (254)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GT~~-----l~~~~~l~eKi~l~~~~gV-~v~~-Gtl~--------E~a~~qg~~~~~~ 105 (254)
.+++.++.+.++ +|.+=+...... ..+.+.+++.-++++++|+ .++. +.+. +....+..+.+.+
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~nl~s~d~~~~r~~~~~~~~~ 98 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYIINIGNTTNLDTFSLGVDFLRA 98 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECCTTCCTTCSSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEeccccccCCCCCcHHHHHHHHHHHHH
Confidence 455666655543 566666222111 1223458888899999999 4443 2221 2222222236888
Q ss_pred HHHHHHHcCCCEEEecCCccc--CChhHHHHHHHHHHH
Q 025344 106 YVEDCKQVGFDTIELNVGSLE--IPEETLLRYVRLVKS 141 (254)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~--i~~~~r~~lI~~~~~ 141 (254)
.++.|+++|.+.|=+--|+.. -+.+.+.++++.+++
T Consensus 99 ~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~ 136 (303)
T 3aal_A 99 EIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNE 136 (303)
T ss_dssp HHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999988777542 123455556665554
No 337
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=67.17 E-value=6.7 Score=36.61 Aligned_cols=86 Identities=17% Similarity=0.202 Sum_probs=52.5
Q ss_pred HHHHHHHHHc-CCCEEEecCCcc----cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 104 KEYVEDCKQV-GFDTIELNVGSL----EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 104 ~~yl~~~k~l-GF~~IEISdGti----~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
+..|+.++++ ||+.||++-..+ ..+.++..++-+.+.++||.+..=-.+ +.. .|-. +.+ .
T Consensus 33 ~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~i~s~--~~~-----~~i~----~~~----~ 97 (386)
T 3bdk_A 33 PVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIESI--PVH-----EDIK----QGK----P 97 (386)
T ss_dssp SSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEEEECC--CCC-----HHHH----TTC----T
T ss_pred HHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEEEecc--ccc-----cccc----cCc----H
Confidence 3478889999 999999985433 356678888999999999986431011 100 0100 000 0
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
.....++.+.+.++..-++|+..|..
T Consensus 98 ~r~~~ie~~k~~i~~aa~lGi~~v~~ 123 (386)
T 3bdk_A 98 NRDALIENYKTSIRNVGAAGIPVVCY 123 (386)
T ss_dssp THHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 01123555666666666789998864
No 338
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=66.98 E-value=5.1 Score=36.88 Aligned_cols=114 Identities=17% Similarity=0.180 Sum_probs=66.1
Q ss_pred eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC------Cc-------------c-----cC-----ChhHHHHH
Q 025344 85 YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV------GS-------------L-----EI-----PEETLLRY 135 (254)
Q Consensus 85 ~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISd------Gt-------------i-----~i-----~~~~r~~l 135 (254)
..++++|-.+ .+=++++++|||++|+++= +. - .+ +.++..++
T Consensus 10 q~f~~~~~~i---------~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~l 80 (422)
T 1ua7_A 10 HAWNWSFNTL---------KHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEM 80 (422)
T ss_dssp ECTTBCHHHH---------HHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHH
T ss_pred EEecCCHHHH---------HHHHHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHH
Confidence 4556776433 2335678999999999875 21 0 01 35889999
Q ss_pred HHHHHHcCCcccceeeeecCCCCCCCcccc--cccccc----ccCCCcc-----------------ccccCHHHHHHHHH
Q 025344 136 VRLVKSAGLKAKPKFAVMFNKSDIPSDRDR--AFGAYV----ARAPRST-----------------EYVEDVDLLIRRAE 192 (254)
Q Consensus 136 I~~~~~~G~~v~~E~g~k~~~s~v~~~~d~--~~~~~~----~~~~~~~-----------------~~~~d~~~~i~~~~ 192 (254)
|+.+.++|++|+-.+-..+-..+-..-.+. ....++ .+..|.. +-..-.+.+++.++
T Consensus 81 v~~~h~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~ 160 (422)
T 1ua7_A 81 CAAAEEYGIKVIVDAVINHTTFDYAAISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLE 160 (422)
T ss_dssp HHHHHTTTCEEEEEECCSBCCSCTTTSCHHHHTSTTCEEECCBCCCTTCHHHHHHSBBTTBCEECTTSHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEeccCcccCCccccCccccCCcccccCCCCCCCcCchhcccccccCCCCccccCCHHHHHHHHHHHH
Confidence 999999999998776653221110000000 000000 1112321 00122367778888
Q ss_pred HHHHcCCcEEEEecc
Q 025344 193 RCLEAGADMIMIDSD 207 (254)
Q Consensus 193 ~dLeAGA~~ViiEar 207 (254)
..++.|+|=.-+.+=
T Consensus 161 ~w~~~gvDGfR~D~~ 175 (422)
T 1ua7_A 161 RALNDGADGFRFDAA 175 (422)
T ss_dssp HHHHTTCCEEEETTG
T ss_pred HHHHcCCCEEEEEhh
Confidence 888999998888875
No 339
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=66.98 E-value=46 Score=31.99 Aligned_cols=130 Identities=10% Similarity=0.130 Sum_probs=63.3
Q ss_pred CChhHHHHHHHHHHh---CCc-eecCCcHHHHHHHhCCchHHHHHHHHHHcCCC-EEEecCCcc-------cCChhHHHH
Q 025344 67 MPKPFIEEVVKRAHQ---HDV-YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD-TIELNVGSL-------EIPEETLLR 134 (254)
Q Consensus 67 ~~~~~l~eKi~l~~~---~gV-~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~-~IEISdGti-------~i~~~~r~~ 134 (254)
|+...+++.++.+++ ++| -+++ .++.-++.-++.+++.+.. .||+|.+.+ .+..++...
T Consensus 3 M~l~~mkelL~~ak~g~~~gi~av~~---------~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~ 73 (450)
T 3txv_A 3 MQENHLIDIARWSERPGPRGIPSICS---------AHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTR 73 (450)
T ss_dssp ------------------CCEEEECC---------CCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHH
T ss_pred ccccCHHHHHHHHHhCCCcEEEEeCc---------CCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHH
Confidence 444457788888775 344 2333 2222344455566888876 468887654 455677777
Q ss_pred HHHHH-HHcCCcccc-eeeeecCCCCCCCccccccccccccCCCccccc-cCHHHHHHHHHHHHHcCCcEEEEecccc-c
Q 025344 135 YVRLV-KSAGLKAKP-KFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV-EDVDLLIRRAERCLEAGADMIMIDSDDV-C 210 (254)
Q Consensus 135 lI~~~-~~~G~~v~~-E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~-~d~~~~i~~~~~dLeAGA~~ViiEargi-~ 210 (254)
+++.+ ++.++.|-| =++--. ..|..|..... +--+.-.+.++++++||=..||+.+.-. +
T Consensus 74 ~V~~~A~~~~vPv~pV~LhlDH----------------g~~~~w~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p~ 137 (450)
T 3txv_A 74 FVGAIADRIEFPREKILLGGDH----------------LGPNPWKHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGCA 137 (450)
T ss_dssp HHHHHHHHTTCCGGGEEEEEEE----------------ESSGGGTTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCCS
T ss_pred HHHHHHHHcCcCcccEEEECCC----------------CCCcccccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCch
Confidence 77655 455554311 122211 22333432221 1234458899999999999999999844 4
Q ss_pred ccCCCccHHHH
Q 025344 211 KHADSLRADII 221 (254)
Q Consensus 211 d~~g~~r~d~i 221 (254)
+.|=.+..+++
T Consensus 138 eeNi~lt~evv 148 (450)
T 3txv_A 138 GEPTALPDATT 148 (450)
T ss_dssp SSCSBCCHHHH
T ss_pred hhccchhHHHH
Confidence 44433333333
No 340
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=66.86 E-value=3.9 Score=35.41 Aligned_cols=123 Identities=17% Similarity=0.109 Sum_probs=74.7
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCC-cH------HHHHHHhCCchHHHHHHHHH
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DW------AEHLIRNGPSAFKEYVEDCK 111 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~G-tl------~E~a~~qg~~~~~~yl~~~k 111 (254)
+...++.+++.+-+| |+.+-.++| ..++.-.+.++..+|.+++. +| .|.- + .=.+++-
T Consensus 17 t~~~i~~l~~~a~~~------~~~aVcv~p-~~v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k-------~-~e~~~Ai 81 (220)
T 1ub3_A 17 TLEEVAKAAEEALEY------GFYGLCIPP-SYVAWVRARYPHAPFRLVTVVGFPLGYQEKEVK-------A-LEAALAC 81 (220)
T ss_dssp CHHHHHHHHHHHHHH------TCSEEECCG-GGHHHHHHHCTTCSSEEEEEESTTTCCSCHHHH-------H-HHHHHHH
T ss_pred CHHHHHHHHHHHHHh------CCCEEEECH-HHHHHHHHHhCCCCceEEEEecCCCCCCchHHH-------H-HHHHHHH
Confidence 667888888888877 555544444 56776666776667887653 22 1221 1 2245667
Q ss_pred HcCCCEEEecCCcccC---ChhHHHHHHHHHHH----cCCcccceeeeecCCCCCCCccccccccccccCCCccccccCH
Q 025344 112 QVGFDTIELNVGSLEI---PEETLLRYVRLVKS----AGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDV 184 (254)
Q Consensus 112 ~lGF~~IEISdGti~i---~~~~r~~lI~~~~~----~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~ 184 (254)
++|-|.|.+--.--.+ ..+.-.+-|+.+++ .++||+-|.+. + +.
T Consensus 82 ~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~------------------l-----------~~ 132 (220)
T 1ub3_A 82 ARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGY------------------F-----------SP 132 (220)
T ss_dssp HTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGG------------------S-----------CH
T ss_pred HcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCC------------------C-----------CH
Confidence 7999999875433222 22222333333333 34555554433 1 36
Q ss_pred HHHHHHHHHHHHcCCcEEEEe
Q 025344 185 DLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 185 ~~~i~~~~~dLeAGA~~ViiE 205 (254)
++++.-.+-..++|||+|=+=
T Consensus 133 e~i~~a~~ia~eaGADfVKTs 153 (220)
T 1ub3_A 133 EEIARLAEAAIRGGADFLKTS 153 (220)
T ss_dssp HHHHHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHHHHHhCCCEEEeC
Confidence 788888999999999999764
No 341
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=66.78 E-value=6.8 Score=33.98 Aligned_cols=48 Identities=15% Similarity=0.107 Sum_probs=32.2
Q ss_pred HHHHHHHHcCCCEEEecCC----cccCChhHHHHHHHHHHHcCCcccceeee
Q 025344 105 EYVEDCKQVGFDTIELNVG----SLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdG----ti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
+.++.+|++||++|-|.-+ -...+.+...++|+.+.++|++|+-+++-
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~Gi~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4566677888888877532 12234456667788888888888877664
No 342
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=66.70 E-value=6.3 Score=37.93 Aligned_cols=47 Identities=21% Similarity=0.219 Sum_probs=36.7
Q ss_pred HHHHHHHcCCCEEEec---------CCccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 106 YVEDCKQVGFDTIELN---------VGSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 106 yl~~~k~lGF~~IEIS---------dGti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
=|+++++|||++|++| .|.-. + +.++..++|+.+.++|++|+-.+-.
T Consensus 50 ~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 115 (570)
T 1m53_A 50 KLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVVI 115 (570)
T ss_dssp THHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3568899999999997 23221 1 3688999999999999999877655
No 343
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=66.64 E-value=18 Score=32.95 Aligned_cols=41 Identities=27% Similarity=0.491 Sum_probs=32.5
Q ss_pred HHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceEEecC
Q 025344 188 IRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT 238 (254)
Q Consensus 188 i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~klifEAP 238 (254)
.++++..|+||||.||++ |+..+.+.+.++.+. .++..||.
T Consensus 217 l~e~~eAl~aGaDiImLD---------n~s~~~l~~av~~~~-~~v~leaS 257 (300)
T 3l0g_A 217 ISQVEESLSNNVDMILLD---------NMSISEIKKAVDIVN-GKSVLEVS 257 (300)
T ss_dssp HHHHHHHHHTTCSEEEEE---------SCCHHHHHHHHHHHT-TSSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEC---------CCCHHHHHHHHHhhc-CceEEEEE
Confidence 578888899999999995 567788887777665 46777775
No 344
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=66.45 E-value=15 Score=33.47 Aligned_cols=149 Identities=12% Similarity=0.160 Sum_probs=79.9
Q ss_pred hhcccccEEeecCcccccCChhHHHHHHHHHHhCCcee--cCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe-cCCcc
Q 025344 49 SMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV--STGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL-NVGSL 125 (254)
Q Consensus 49 ~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v--~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEI-SdGti 125 (254)
-..+|+|++|+|-+. +.+-+.|++ +. +.|.+| ..|... .++.+..-++++.+-|-+-|=+ --|+
T Consensus 127 ~l~~~vd~lkIgA~~--~~n~~LLr~-va---~~gkPVilK~Gms~------t~~ei~~ave~i~~~Gn~~iiL~erg~- 193 (298)
T 3fs2_A 127 AVAPVVDVLQIPAFL--CRQTDLLIA-AA---RTGRVVNVKKGQFL------APWDMKNVLAKITESGNPNVLATERGV- 193 (298)
T ss_dssp HHTTTCSEEEECGGG--TTCHHHHHH-HH---HTTSEEEEECCTTC------CGGGHHHHHHHHHTTTCCCEEEEECCE-
T ss_pred HHHhhCCEEEECccc--cCCHHHHHH-HH---ccCCcEEEeCCCCC------CHHHHHHHHHHHHHcCCCeEEEEECCC-
Confidence 446789999998654 444444554 32 456644 457420 1112334445556666553333 2232
Q ss_pred cCChhH---HHHHHHHHHHcCCcccc--eeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCc
Q 025344 126 EIPEET---LLRYVRLVKSAGLKAKP--KFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD 200 (254)
Q Consensus 126 ~i~~~~---r~~lI~~~~~~G~~v~~--E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~ 200 (254)
+-+..+ -++.|..+++.|+.|.. -=.++.+. ..+... .-..+.++..+...+++||+
T Consensus 194 ~y~~~~~~vdl~~i~~lk~~~~PV~~D~sHsvq~p~----~~~~~s--------------~G~r~~v~~~a~AAvAlGAd 255 (298)
T 3fs2_A 194 SFGYNTLVSDMRALPIMAGLGAPVIFDATHSVQQPG----GQGGST--------------GGQREFVETLARAAVAVGVA 255 (298)
T ss_dssp ECSSSCEECCTTHHHHHHTTTSCEEEEHHHHTCCCC--------------------------CGGGHHHHHHHHHHHCCS
T ss_pred CCCCCCCccCHHHHHHHHHcCCcEEEcCCCccccCC----cccCCC--------------CCchhhHHHHHHHHHHcCCC
Confidence 222222 13456666664443321 11111110 000000 00133457788899999999
Q ss_pred EEEEec-----ccccccCCCccHHHHHHHHhcc
Q 025344 201 MIMIDS-----DDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 201 ~ViiEa-----rgi~d~~g~~r~d~i~~ii~~l 228 (254)
-+|||- +-++|..-.+..+.++++++.+
T Consensus 256 Gl~IE~H~tpd~al~D~~~sl~p~el~~lv~~i 288 (298)
T 3fs2_A 256 GFFIETHEDPDNAPSDGPNMVPIDKMPALLEKL 288 (298)
T ss_dssp EEEEEEESSGGGCSSSGGGCEEGGGHHHHHHHH
T ss_pred EEEEEecCChhccCCchhhcCCHHHHHHHHHHH
Confidence 999998 3677888889999888888654
No 345
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=66.37 E-value=15 Score=30.66 Aligned_cols=95 Identities=8% Similarity=0.032 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHHhCCcee---cCC--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc------cCChhHHHHHHH
Q 025344 69 KPFIEEVVKRAHQHDVYV---STG--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL------EIPEETLLRYVR 137 (254)
Q Consensus 69 ~~~l~eKi~l~~~~gV~v---~~G--tl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti------~i~~~~r~~lI~ 137 (254)
++.+++-++.+|++|+.+ ..| |. |- ...+.++|++++=+.-|+. ..+.++ .+.|+
T Consensus 95 ~~~~~~~~~~~~~~g~~~~~d~l~~~T~-~~------------~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~-l~~i~ 160 (218)
T 3jr2_A 95 IATIAACKKVADELNGEIQIEIYGNWTM-QD------------AKAWVDLGITQAIYHRSRDAELAGIGWTTDD-LDKMR 160 (218)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCSSCCH-HH------------HHHHHHTTCCEEEEECCHHHHHHTCCSCHHH-HHHHH
T ss_pred HHHHHHHHHHHHHhCCccceeeeecCCH-HH------------HHHHHHcCccceeeeeccccccCCCcCCHHH-HHHHH
Confidence 345788888888888855 444 43 21 1122345999876533321 123332 35566
Q ss_pred HHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEeccccccc
Q 025344 138 LVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKH 212 (254)
Q Consensus 138 ~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~ 212 (254)
+++...+.+....|++. +.+...++|||+.|++= +.|++.
T Consensus 161 ~~~~~~~pi~v~GGI~~----------------------------------~~~~~~~~aGAd~vvvG-saI~~a 200 (218)
T 3jr2_A 161 QLSALGIELSITGGIVP----------------------------------EDIYLFEGIKTKTFIAG-RALAGA 200 (218)
T ss_dssp HHHHTTCEEEEESSCCG----------------------------------GGGGGGTTSCEEEEEES-GGGSHH
T ss_pred HHhCCCCCEEEECCCCH----------------------------------HHHHHHHHcCCCEEEEc-hhhcCC
Confidence 66655566666666631 11223589999999885 567754
No 346
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=66.28 E-value=28 Score=29.42 Aligned_cols=95 Identities=17% Similarity=0.211 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHhCCcee--cCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc--------cCCh---hHHHHHH
Q 025344 70 PFIEEVVKRAHQHDVYV--STGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL--------EIPE---ETLLRYV 136 (254)
Q Consensus 70 ~~l~eKi~l~~~~gV~v--~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti--------~i~~---~~r~~lI 136 (254)
+.++++++.++++|+.+ +-|+-.|. +.+.++|.+.|=+..-.. +.+. ++-.++|
T Consensus 98 ~e~~~~~~~a~~~Gl~~iv~v~~~~e~-------------~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~i 164 (219)
T 2h6r_A 98 ADIEAVINKCKNLGLETIVCTNNINTS-------------KAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAV 164 (219)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSSHHH-------------HHHTTTCCSEEEECCCC--------------CSHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCchHH-------------HHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHH
Confidence 45999999999999943 44754443 223445666666554331 2222 3444555
Q ss_pred HHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEeccccccc
Q 025344 137 RLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKH 212 (254)
Q Consensus 137 ~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~ 212 (254)
+...+ +..+..++|++. -+.++...++|||-|+| ++.+.+.
T Consensus 165 r~~~~-~~~ii~ggGI~~---------------------------------~~~~~~~~~~gaDgvlV-GsAi~~~ 205 (219)
T 2h6r_A 165 KEINK-DVKVLCGAGISK---------------------------------GEDVKAALDLGAEGVLL-ASGVVKA 205 (219)
T ss_dssp HHHCT-TCEEEECSSCCS---------------------------------HHHHHHHHTTTCCCEEE-SHHHHTC
T ss_pred HhccC-CCeEEEEeCcCc---------------------------------HHHHHHHhhCCCCEEEE-cHHHhCc
Confidence 55432 677888888841 23445567889999988 3334443
No 347
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=66.05 E-value=7.2 Score=33.95 Aligned_cols=52 Identities=15% Similarity=0.097 Sum_probs=38.7
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc------------c--------cCC-----hhHHHHHHHHHHHcCCcccceeee
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGS------------L--------EIP-----EETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt------------i--------~i~-----~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
..+++.++.+|++||++|-+.--. + .+. .+...++|+.|+++|++|+-++..
T Consensus 36 ~~~~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~~ 112 (344)
T 1qnr_A 36 ADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVN 112 (344)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCB
T ss_pred HHHHHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 468899999999999999884210 0 111 344468999999999999988864
No 348
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=65.93 E-value=8.1 Score=34.90 Aligned_cols=68 Identities=19% Similarity=0.176 Sum_probs=51.1
Q ss_pred HHHHHHHHHhCCceec---CCcHHHHHHHhC-CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc
Q 025344 72 IEEVVKRAHQHDVYVS---TGDWAEHLIRNG-PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (254)
Q Consensus 72 l~eKi~l~~~~gV~v~---~Gtl~E~a~~qg-~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v 146 (254)
+++-|++.|+.|-.+. |+.. ..+ ...-++.+++++++|++.||+..+. -+.+++.++.+.+++.||.+
T Consensus 185 ~~eaI~~I~~aGGvaVLAHP~r~-----~~~r~~~~~~~l~~l~~~GldgIEv~~~~--~~~~~~~~~~~lA~~~gL~~ 256 (301)
T 3o0f_A 185 THEVIAAVKGAGGVVVAAHAGDP-----QRNRRLLSDEQLDAMIADGLDGLEVWHRG--NPPEQRERLLTIAARHDLLV 256 (301)
T ss_dssp HHHHHHHHHHTTCEEEECSTTCT-----TTCSSCCCHHHHHHHHHHTCCEEEEESTT--SCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHCCCEEEecChhhh-----ccccccCcHHHHHHHHHCCCCEEEEeCCC--CCHHHHHHHHHHHHHcCCce
Confidence 8999999999997433 4321 001 1133567888899999999999965 47888889999999999874
No 349
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=65.83 E-value=12 Score=33.78 Aligned_cols=131 Identities=8% Similarity=0.046 Sum_probs=76.6
Q ss_pred hHHHHHHHhhcccccEE-eecCcccccCChhHHHHHHHHHHhCCceecC----CcHHHHHHHhCCchHHHHHHHHHHcCC
Q 025344 41 NVLEDIFESMGQFVDGL-KFSGGSHSLMPKPFIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQVGF 115 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~l-Kfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~----Gtl~E~a~~qg~~~~~~yl~~~k~lGF 115 (254)
...++.++.-++-|++. .+|-+...-+- +.+.+-++.||++|+++.. |.=+ ..+++.+..-.+.+.++|-
T Consensus 129 ~~ve~Av~~GAdaV~~~i~~Gs~~~~~~l-~~i~~v~~~a~~~GlpvIie~~~G~~~----~~d~e~i~~aariA~elGA 203 (295)
T 3glc_A 129 LSMDDAVRLNSCAVAAQVYIGSEYEHQSI-KNIIQLVDAGMKVGMPTMAVTGVGKDM----VRDQRYFSLATRIAAEMGA 203 (295)
T ss_dssp SCHHHHHHTTCSEEEEEECTTSTTHHHHH-HHHHHHHHHHHTTTCCEEEEECC--------CCSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEEEECCCCcHHHHH-HHHHHHHHHHHHcCCEEEEECCCCCcc----CCCHHHHHHHHHHHHHhCC
Confidence 36788888888888874 33322111111 2266889999999986542 3211 1222234556677889999
Q ss_pred CEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHH
Q 025344 116 DTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCL 195 (254)
Q Consensus 116 ~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dL 195 (254)
|.|-.+- +.+.. +++.+.. .+.+... ++.+ .+.++..+.++..+
T Consensus 204 D~VKt~~-----t~e~~----~~vv~~~-----~vPVv~~------GG~~----------------~~~~~~l~~v~~ai 247 (295)
T 3glc_A 204 QIIKTYY-----VEKGF----ERIVAGC-----PVPIVIA------GGKK----------------LPEREALEMCWQAI 247 (295)
T ss_dssp SEEEEEC-----CTTTH----HHHHHTC-----SSCEEEE------CCSC----------------CCHHHHHHHHHHHH
T ss_pred CEEEeCC-----CHHHH----HHHHHhC-----CCcEEEE------ECCC----------------CCHHHHHHHHHHHH
Confidence 9999983 12222 3333321 1222211 1111 13678899999999
Q ss_pred HcCCcEEEEecccccccC
Q 025344 196 EAGADMIMIDSDDVCKHA 213 (254)
Q Consensus 196 eAGA~~ViiEargi~d~~ 213 (254)
++||+-|++ +|.||...
T Consensus 248 ~aGA~Gv~v-GRnI~q~~ 264 (295)
T 3glc_A 248 DQGASGVDM-GRNIFQSD 264 (295)
T ss_dssp HTTCSEEEE-SHHHHTSS
T ss_pred HhCCeEEEe-HHHHhcCc
Confidence 999997776 77788764
No 350
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=65.78 E-value=6.6 Score=35.77 Aligned_cols=75 Identities=11% Similarity=0.102 Sum_probs=49.8
Q ss_pred CChhHHHHHHHHHHhCCceecC--CcHH--HHHHHh-CCchH-HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH
Q 025344 67 MPKPFIEEVVKRAHQHDVYVST--GDWA--EHLIRN-GPSAF-KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK 140 (254)
Q Consensus 67 ~~~~~l~eKi~l~~~~gV~v~~--Gtl~--E~a~~q-g~~~~-~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~ 140 (254)
++...+..-|.-+|++|+.|.. ||+- +.+-.. ..+.+ +.|.+.++++|||.|.|.=-.-.. .+.+.+.++.++
T Consensus 58 ~~~~~~~~~I~~~q~~G~kVllSiGGa~Gs~~~~s~~~~~~~a~~~~~~i~~ygldGIDfDiE~~~~-~d~~~~aL~~l~ 136 (311)
T 2dsk_A 58 IPLEKFVDEVRELREIGGEVIIAFGGAVGPYLCQQASTPEQLAEWYIKVIDTYNATYLDFDIEAGID-ADKLADALLIVQ 136 (311)
T ss_dssp BCGGGGHHHHHHHHTTTCEEEEEEEESSCCCHHHHCSSHHHHHHHHHHHHHHHTCSEEEEEECSCCC-HHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHCCCeEEEEecCCCCccccccccCHHHHHHHHHHHHHHhCCCcEEEeccCCcc-HHHHHHHHHHHH
Confidence 4446689999999999996653 6542 222221 21233 458899999999999875332222 357888888887
Q ss_pred Hc
Q 025344 141 SA 142 (254)
Q Consensus 141 ~~ 142 (254)
+.
T Consensus 137 ~~ 138 (311)
T 2dsk_A 137 RE 138 (311)
T ss_dssp HH
T ss_pred hh
Confidence 75
No 351
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=65.65 E-value=11 Score=34.27 Aligned_cols=105 Identities=14% Similarity=0.176 Sum_probs=65.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
.++++.++++++||.+|=|+-+.+..- -+.++..+.+|.+=+| ||...
T Consensus 75 dI~~lc~eA~~~g~aaVCV~P~~V~~a-------~~~L~~s~V~V~tVig--FP~G~----------------------- 122 (288)
T 3oa3_A 75 QIDVLCAEAKEYGFATVCVRPDYVSRA-------VQYLQGTQVGVTCVIG--FHEGT----------------------- 122 (288)
T ss_dssp HHHHHHHHHHHHTCSEEEECGGGHHHH-------HHHTTTSSCEEEEEES--TTTSC-----------------------
T ss_pred HHHHHHHHHHhcCCcEEEECHHHHHHH-------HHHcCCCCCeEEEEeC--CCCCC-----------------------
Confidence 688999999999999999986654322 2223445666655433 44311
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEecc-cc-cccCCCccHHHHHHHHhccC--CCceEEecC
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDSD-DV-CKHADSLRADIIAKVIGRLG--LEKTMFEAT 238 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEar-gi-~d~~g~~r~d~i~~ii~~l~--~~klifEAP 238 (254)
.+.+-.+.+++..+++||+-|=+==. |. -+.+...-.++|..+.+..+ +=|+|+|..
T Consensus 123 ~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~ 183 (288)
T 3oa3_A 123 YSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETS 183 (288)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGG
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECC
Confidence 13566789999999999987753222 22 22222223445566665544 468899986
No 352
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=65.30 E-value=24 Score=33.22 Aligned_cols=67 Identities=19% Similarity=0.247 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~ 179 (254)
.+.+-++++.+.|++.|+|+...- ......+.|+.+++. ++.|. +++. .
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G--~~~~~~e~i~~i~~~~p~~pvi----~g~~---------------~-------- 287 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHG--HSRRVIETLEMIKADYPDLPVV----AGNV---------------A-------- 287 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC--SSHHHHHHHHHHHHHCTTSCEE----EEEE---------------C--------
T ss_pred hHHHHHHHHHHhCCCEEEEEecCC--chHHHHHHHHHHHHHCCCceEE----eCCc---------------C--------
Confidence 456788899999999999954422 223445778888775 33322 1110 1
Q ss_pred cccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 180 YVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 180 ~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
+ .+.++...++||+.|.+
T Consensus 288 ---t----~e~a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 288 ---T----PEGTEALIKAGADAVKV 305 (494)
T ss_dssp ---S----HHHHHHHHHTTCSEEEE
T ss_pred ---C----HHHHHHHHHcCCCEEEE
Confidence 2 44557778999999999
No 353
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=65.26 E-value=3.9 Score=38.29 Aligned_cols=52 Identities=15% Similarity=0.166 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc------------------cC-----ChhHHHHHHHHHHHcCCcccceeeee
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSL------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
-.++-++++++|||++|.||==+- .+ +.++..++|+.+.++|++|+-.+-..
T Consensus 24 i~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 98 (471)
T 1jae_A 24 IADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDAVIN 98 (471)
T ss_dssp HHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccccccCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 455557888999999999972111 11 25789999999999999998877553
No 354
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=65.25 E-value=6.8 Score=37.43 Aligned_cols=47 Identities=17% Similarity=0.130 Sum_probs=36.6
Q ss_pred HHHHHHHcCCCEEEecC---------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 025344 106 YVEDCKQVGFDTIELNV---------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 106 yl~~~k~lGF~~IEISd---------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
=|+++++|||++|.+|- |.-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 36 ~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (543)
T 2zic_A 36 KLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVV 101 (543)
T ss_dssp THHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 35788999999999872 22211 3678999999999999999877655
No 355
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=65.19 E-value=34 Score=30.38 Aligned_cols=139 Identities=21% Similarity=0.196 Sum_probs=78.9
Q ss_pred hcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCcH---HHHHHHhCCchHHHHHHHHHHcCCCEEEecC-Ccc
Q 025344 50 MGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDW---AEHLIRNGPSAFKEYVEDCKQVGFDTIELNV-GSL 125 (254)
Q Consensus 50 ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl---~E~a~~qg~~~~~~yl~~~k~lGF~~IEISd-Gti 125 (254)
..+|+|++|+|-++ +.+.+ |.+.+.- ..-=|.++.|+. -|+. .-++.++.-|-+-|=+=. |+-
T Consensus 118 l~~~vd~~kIgs~~--~~n~~-ll~~~a~-~~kPV~lk~G~~~t~~ei~---------~Ave~i~~~Gn~~i~L~~Rg~~ 184 (276)
T 1vs1_A 118 VSRYADMLQIGARN--MQNFP-LLREVGR-SGKPVLLKRGFGNTVEELL---------AAAEYILLEGNWQVVLVERGIR 184 (276)
T ss_dssp HHHHCSEEEECGGG--TTCHH-HHHHHHH-HTCCEEEECCTTCCHHHHH---------HHHHHHHHTTCCCEEEEECCBC
T ss_pred HHHhCCeEEECccc--ccCHH-HHHHHHc-cCCeEEEcCCCCCCHHHHH---------HHHHHHHHcCCCeEEEEeCCcC
Confidence 34568999999766 55554 4445542 233345556753 3333 223345667774444433 554
Q ss_pred cCC----hhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCc
Q 025344 126 EIP----EETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD 200 (254)
Q Consensus 126 ~i~----~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~ 200 (254)
+-| ++--++.|..+++. |+. ++.- +. |....-+.....+...+.+||+
T Consensus 185 ~yp~y~~~~vdl~~i~~lk~~~~lp----Vi~d-ss----------------------H~~g~~~~~~~~~~aAva~Ga~ 237 (276)
T 1vs1_A 185 TFEPSTRFTLDVAAVAVLKEATHLP----VIVD-PS----------------------HPAGRRSLVPALAKAGLAAGAD 237 (276)
T ss_dssp CSCCSSSSBCBHHHHHHHHHHBSSC----EEEC-CH----------------------HHHCSGGGHHHHHHHHHHTTCS
T ss_pred CCCCcCcchhCHHHHHHHHHHhCCC----EEEe-CC----------------------CCCCccchHHHHHHHHHHcCCC
Confidence 332 22234556666663 432 2221 01 1111112224445556889999
Q ss_pred EEEEecc-----cccccCCCccHHHHHHHHhcc
Q 025344 201 MIMIDSD-----DVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 201 ~ViiEar-----gi~d~~g~~r~d~i~~ii~~l 228 (254)
=||||.- -+.|..-.+..+.+.++++.+
T Consensus 238 Gl~IE~H~~~d~a~~D~~~sl~p~~~~~lv~~i 270 (276)
T 1vs1_A 238 GLIVEVHPNPEEALSDAKQQLTPGEFARLMGEL 270 (276)
T ss_dssp EEEEEBCSSGGGCSSCGGGCBCHHHHHHHHHHH
T ss_pred EEEEEecCCcccCCCchhcCCCHHHHHHHHHHH
Confidence 9999984 567888999999999998764
No 356
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=65.15 E-value=5.1 Score=36.11 Aligned_cols=46 Identities=24% Similarity=0.341 Sum_probs=38.7
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
+++++++.+.+|.+|||..|=+=.|. -+...+++.+...+++.++-
T Consensus 32 TpeEia~~A~~a~~AGAaivHlHvRd-~~G~ps~d~~~~~e~~~~IR 77 (282)
T 2y7e_A 32 TPEEQAKEAKACFEAGARVIHLHIRE-DDGRPSQRLDRFQEAISAIR 77 (282)
T ss_dssp SHHHHHHHHHHHHHHTEEEEEECEEC-TTSCEECCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeecC-CCCCcCCCHHHHHHHHHHHH
Confidence 69999999999999999999999997 44456778888888876554
No 357
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=64.80 E-value=5.2 Score=37.70 Aligned_cols=24 Identities=4% Similarity=0.106 Sum_probs=19.6
Q ss_pred hHHHHHHHHHH-cCCCEEEecCCcc
Q 025344 102 AFKEYVEDCKQ-VGFDTIELNVGSL 125 (254)
Q Consensus 102 ~~~~yl~~~k~-lGF~~IEISdGti 125 (254)
...++.+.+.+ .|+++|.||.|+.
T Consensus 265 d~~~la~~L~~~~Gvd~I~vs~g~~ 289 (419)
T 3l5a_A 265 EFNQLIDWVMDVSNIQYLAIASWGR 289 (419)
T ss_dssp HHHHHHHHHHHHSCCCCEEECCTTC
T ss_pred HHHHHHHHHHhhcCCcEEEEeeCCc
Confidence 35567777888 9999999999975
No 358
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=64.71 E-value=17 Score=31.14 Aligned_cols=121 Identities=20% Similarity=0.191 Sum_probs=72.0
Q ss_pred hHHHHHHHhhcc---cccE-EeecCcccccCChhHHHHHHHHHHhCC-----ceecC-C-cHHHHHHHhCCch-------
Q 025344 41 NVLEDIFESMGQ---FVDG-LKFSGGSHSLMPKPFIEEVVKRAHQHD-----VYVST-G-DWAEHLIRNGPSA------- 102 (254)
Q Consensus 41 ~~~~DlLe~ag~---yID~-lKfg~GT~~l~~~~~l~eKi~l~~~~g-----V~v~~-G-tl~E~a~~qg~~~------- 102 (254)
..|+++|+.+.. .+.+ +|-.-+. .+...+...++.++++ |.++. - ..+..+-...|+-
T Consensus 98 ptL~evl~~~~~~~~~l~iEiK~~~~~----~~~~~~~v~~~l~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~ 173 (252)
T 3qvq_A 98 PTLLEAIEVISQYGMGLNLELKPCEGL----EEETIAASVEVLKQHWPQDLPLLFSSFNYFALVSAKALWPEIARGYNVS 173 (252)
T ss_dssp CBHHHHHHHHHHTTCEEEEEECCCTTC----HHHHHHHHHHHHHHHSCTTSCEEEEESCHHHHHHHHHHCTTSCEEEECS
T ss_pred cCHHHHHHHHhccCcEEEEEecCCCCc----cHHHHHHHHHHHHHhCcccCCEEEEeCCHHHHHHHHHHCCCCcEEEEEe
Confidence 478888887642 2222 5632221 1222333445555544 33333 2 3444444433221
Q ss_pred --HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccc
Q 025344 103 --FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (254)
Q Consensus 103 --~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~ 180 (254)
-.++.+.++.+|++.+.++...++ .++|+.+++.|++|.+ .++ .
T Consensus 174 ~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~v~~~~~~G~~v~~-WTv----------n----------------- 219 (252)
T 3qvq_A 174 AIPSAWQERLEHLDCAGLHIHQSFFD------VQQVSDIKAAGYKVLA-FTI----------N----------------- 219 (252)
T ss_dssp SCCTTHHHHHHHHTCSEEEEEGGGCC------HHHHHHHHHTTCEEEE-ECC----------C-----------------
T ss_pred cCchhHHHHHHHcCCeEEecchhhCC------HHHHHHHHHCCCEEEE-EcC----------C-----------------
Confidence 145677888999999988765443 3789999999988765 233 1
Q ss_pred ccCHHHHHHHHHHHHHcCCcEEEEe
Q 025344 181 VEDVDLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 181 ~~d~~~~i~~~~~dLeAGA~~ViiE 205 (254)
| .+.+++.++.|+|.||..
T Consensus 220 --~----~~~~~~l~~~GVdgIiTD 238 (252)
T 3qvq_A 220 --D----ESLALKLYNQGLDAVFSD 238 (252)
T ss_dssp --C----HHHHHHHHHTTCCEEEES
T ss_pred --C----HHHHHHHHHcCCCEEEeC
Confidence 1 456788899999999975
No 359
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=64.66 E-value=6.4 Score=34.49 Aligned_cols=46 Identities=9% Similarity=0.153 Sum_probs=36.1
Q ss_pred HHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceEEec
Q 025344 190 RAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEA 237 (254)
Q Consensus 190 ~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~klifEA 237 (254)
.+++.| +||++|++-+. ...++|+++++.+.++++.++-++++.=.
T Consensus 89 ~~~~~l-~Ga~~Viigs~-a~~~~g~~~p~~~~~~~~~~g~~~ivv~i 134 (260)
T 2agk_A 89 NCLEWL-KWASKVIVTSW-LFTKEGHFQLKRLERLTELCGKDRIVVDL 134 (260)
T ss_dssp THHHHT-TTCSCEEECGG-GBCTTCCBCHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHh-cCCCEEEECcH-HHhhcCCCCHHHHHHHHHHhCcCcEEEEE
Confidence 567778 99999998665 33444899999999999999877765443
No 360
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=64.59 E-value=17 Score=33.44 Aligned_cols=114 Identities=18% Similarity=0.187 Sum_probs=64.5
Q ss_pred HHHHHHHHHHh------CCceecCCcHHHHHHHhCCc---hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHH
Q 025344 71 FIEEVVKRAHQ------HDVYVSTGDWAEHLIRNGPS---AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKS 141 (254)
Q Consensus 71 ~l~eKi~l~~~------~gV~v~~Gtl~E~a~~qg~~---~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~ 141 (254)
.+.|.|+-.++ -+|++++..++.-. .+.+ .+.++.+.+.+.|.++|+||.|+. . . .+++.+++
T Consensus 205 f~~eiv~aVr~~vg~~~v~vRls~~~~~~g~--~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~--~-~---~~~~~ik~ 276 (362)
T 4ab4_A 205 LLLEVTDAAIEVWGAQRVGVHLAPRADAHDM--GDADRAETFTYVARELGKRGIAFICSREREA--D-D---SIGPLIKE 276 (362)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCSSSC--CCTTHHHHHHHHHHHHHHTTCSEEEEECCCC--T-T---CCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEeecccccccc--CCCCcHHHHHHHHHHHHHhCCCEEEECCCCC--C-H---HHHHHHHH
Confidence 45556655553 34566664332100 0111 244567777889999999999982 1 1 23444444
Q ss_pred cCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcC-CcEEEEecccccccCCCccHHH
Q 025344 142 AGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRADI 220 (254)
Q Consensus 142 ~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAG-A~~ViiEargi~d~~g~~r~d~ 220 (254)
. + -+|=++. +. ++ .+.+++.|++| ||.|++ +|++.- ++++
T Consensus 277 ~-~-~iPvi~~---------------Gg-it---------------~e~a~~~l~~g~aD~V~i-GR~~la-----nPdl 317 (362)
T 4ab4_A 277 A-F-GGPYIVN---------------ER-FD---------------KASANAALASGKADAVAF-GVPFIA-----NPDL 317 (362)
T ss_dssp H-H-CSCEEEE---------------SS-CC---------------HHHHHHHHHTTSCSEEEE-SHHHHH-----CTTH
T ss_pred H-C-CCCEEEe---------------CC-CC---------------HHHHHHHHHcCCccEEEE-CHHhHh-----CcHH
Confidence 2 0 0121121 01 12 56788889998 999988 565432 2467
Q ss_pred HHHHHhccCCC
Q 025344 221 IAKVIGRLGLE 231 (254)
Q Consensus 221 i~~ii~~l~~~ 231 (254)
+.++.+..++.
T Consensus 318 ~~k~~~g~~l~ 328 (362)
T 4ab4_A 318 PARLAADAPLN 328 (362)
T ss_dssp HHHHHTTCCCC
T ss_pred HHHHHcCCCCC
Confidence 88888877764
No 361
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=64.54 E-value=10 Score=37.06 Aligned_cols=103 Identities=20% Similarity=0.252 Sum_probs=60.4
Q ss_pred HHHHHHHHHcCCCEEEecC----------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeeeecCCCCC-C-C
Q 025344 104 KEYVEDCKQVGFDTIELNV----------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDI-P-S 161 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISd----------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v-~-~ 161 (254)
++.++++++|||++|+++- |.-. + +.++..++|+.+.++|++|+-.+-..+-.++- + .
T Consensus 159 ~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~ 238 (617)
T 1m7x_A 159 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALA 238 (617)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCSTTSST
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEEEecCcccCccchhh
Confidence 3445888999999999962 2211 1 25889999999999999998877653221100 0 0
Q ss_pred cccccccccc--c-----cCCCcc-----ccccCHHHHHHHHHHHHHc-CCcEEEEecc
Q 025344 162 DRDRAFGAYV--A-----RAPRST-----EYVEDVDLLIRRAERCLEA-GADMIMIDSD 207 (254)
Q Consensus 162 ~~d~~~~~~~--~-----~~~~~~-----~~~~d~~~~i~~~~~dLeA-GA~~ViiEar 207 (254)
.-|.. .-+. . ...|.+ +...-.+.+++.++..++. |+|=.-+.+=
T Consensus 239 ~~d~~-~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~~~~gvDGfR~D~~ 296 (617)
T 1m7x_A 239 EFDGT-NLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAV 296 (617)
T ss_dssp TGGGS-CSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCS
T ss_pred hcCCC-ccccccCcccCCcCCCCCceecCCCHHHHHHHHHHHHHHHHHhCcCEEEEcch
Confidence 00100 0000 0 012321 1112236788888999985 9999999873
No 362
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=64.51 E-value=9.1 Score=35.48 Aligned_cols=46 Identities=20% Similarity=0.368 Sum_probs=35.8
Q ss_pred HHHHHHcCCCEEEecC-----------Ccc--------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNV-----------GSL--------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISd-----------Gti--------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
++++++|||++|.++= |.- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 34 Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 34 IPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp HHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5677999999999962 211 13 3789999999999999999877655
No 363
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=64.48 E-value=5.6 Score=33.49 Aligned_cols=53 Identities=9% Similarity=0.090 Sum_probs=38.4
Q ss_pred CchHHHHHHHHHHcCCCEEEec---CCcc--------------------------------cCChhHHHHHHHHHHHcCC
Q 025344 100 PSAFKEYVEDCKQVGFDTIELN---VGSL--------------------------------EIPEETLLRYVRLVKSAGL 144 (254)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEIS---dGti--------------------------------~i~~~~r~~lI~~~~~~G~ 144 (254)
+..+++.|+.++++||++|-|= +|.. +-..+..-+++..++++|+
T Consensus 36 ~~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi 115 (387)
T 4awe_A 36 QPDIEKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSATKTGI 115 (387)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchhhhhcccCccchhhhhhHHHHHHHHHHcCC
Confidence 3478999999999999999981 1100 0112334578999999999
Q ss_pred cccceeee
Q 025344 145 KAKPKFAV 152 (254)
Q Consensus 145 ~v~~E~g~ 152 (254)
+|+.++..
T Consensus 116 ~v~~~~~~ 123 (387)
T 4awe_A 116 KLIVALTN 123 (387)
T ss_dssp EEEEECCB
T ss_pred EEEEeecc
Confidence 99988765
No 364
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=64.48 E-value=8.1 Score=37.46 Aligned_cols=49 Identities=12% Similarity=0.164 Sum_probs=37.4
Q ss_pred HHHHHHHHcCCCEEEecCCcc-----------------cC-----ChhHHHHHHHHHHHcCCcccceeeee
Q 025344 105 EYVEDCKQVGFDTIELNVGSL-----------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti-----------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
+=|+++++|||++|.+|-=+- .+ +.++..++|+.+.++|++|+-.+-..
T Consensus 152 ~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 222 (601)
T 3edf_A 152 DHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLS 222 (601)
T ss_dssp HTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 346788999999999873221 11 35789999999999999998776553
No 365
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=64.36 E-value=17 Score=30.90 Aligned_cols=89 Identities=9% Similarity=-0.030 Sum_probs=57.5
Q ss_pred ccccCChhHHHHHHHHHHhCCceecC-C-cHHHHHHHhCCchHHHHHHHHHHcCC----------------------CEE
Q 025344 63 SHSLMPKPFIEEVVKRAHQHDVYVST-G-DWAEHLIRNGPSAFKEYVEDCKQVGF----------------------DTI 118 (254)
Q Consensus 63 T~~l~~~~~l~eKi~l~~~~gV~v~~-G-tl~E~a~~qg~~~~~~yl~~~k~lGF----------------------~~I 118 (254)
...+..++.+....++++++++.+.- - -+-|.....+...+.+.++.++++|| |.|
T Consensus 113 ~~~l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~L~~~G~~ialDDfG~g~ssl~~L~~l~~d~i 192 (268)
T 3hv8_A 113 SASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFI 192 (268)
T ss_dssp HHHHTCTTHHHHHHHHHHHHTCCSSCEEEEEEHHHHHHTHHHHHHHHHHHHHTTCEEEEEEETCSSSTTGGGGTCCCSEE
T ss_pred HHHhcCchHHHHHHHHHHHcCCChhhEEEEEEcHHHHhCHHHHHHHHHHHHHCCCEEEEeCCCCChHHHHHHHhCCCCEE
Confidence 34466677777778888888864332 1 24566766655577888888888775 556
Q ss_pred EecCCccc-CChh----HHHHHHHHHHHcCCcccceeee
Q 025344 119 ELNVGSLE-IPEE----TLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 119 EISdGti~-i~~~----~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
-|+-.++. +..+ .-..+|..+++.|.+|+.| ||
T Consensus 193 KiD~~~v~~~~~~~~~~~l~~ii~~~~~~~~~viae-GV 230 (268)
T 3hv8_A 193 KIDGSFVQDLNQVENQEILKGLIAELHEQQKLSIVP-FV 230 (268)
T ss_dssp EECGGGGSSTTSHHHHHHHHHHHHHHHHTTCEEEEC-CC
T ss_pred EECHHHHHhhhcChhHHHHHHHHHHHHHcCCCEEEE-ee
Confidence 66554442 2222 2345777888888888887 67
No 366
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=64.27 E-value=26 Score=30.41 Aligned_cols=19 Identities=21% Similarity=0.204 Sum_probs=15.5
Q ss_pred HHHHHHHHHcCCcEEEEec
Q 025344 188 IRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 188 i~~~~~dLeAGA~~ViiEa 206 (254)
-++++..+.+|||-|||=+
T Consensus 217 ~e~~~~~~~agAD~vVVGS 235 (268)
T 1qop_A 217 PEQVSAAVRAGAAGAISGS 235 (268)
T ss_dssp HHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEECh
Confidence 4667778999999999854
No 367
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=64.25 E-value=8.6 Score=35.19 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=39.7
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceec
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS 87 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~ 87 (254)
......++++..++||+++|.|.--..-+..+.+++..++++.+|..++
T Consensus 94 ~~~~al~l~~~l~~~v~~vKvG~~l~~~~G~~~v~~L~~~a~~~g~~If 142 (312)
T 3g3d_A 94 LARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIF 142 (312)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHhCCCceEEEEcHHHHHHhCHHHHHHHHHHHhhCCCEEE
Confidence 5678899999999999999999776666677778888788777776554
No 368
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=64.10 E-value=18 Score=33.38 Aligned_cols=84 Identities=14% Similarity=0.118 Sum_probs=52.5
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~ 182 (254)
+.++.+.+.+.|.++|+||.|+. . . .+++.+++. + -+|=++. +. ++
T Consensus 252 ~~~la~~l~~~Gvd~i~v~~~~~--~-~---~~~~~ik~~-~-~iPvi~~---------------Gg-it---------- 297 (361)
T 3gka_A 252 FGHVARELGRRRIAFLFARESFG--G-D---AIGQQLKAA-F-GGPFIVN---------------EN-FT---------- 297 (361)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCS--T-T---CCHHHHHHH-H-CSCEEEE---------------SS-CC----------
T ss_pred HHHHHHHHHHcCCCEEEECCCCC--C-H---HHHHHHHHH-c-CCCEEEe---------------CC-CC----------
Confidence 44566777888999999999982 1 1 334444442 0 0121111 01 12
Q ss_pred CHHHHHHHHHHHHHcC-CcEEEEecccccccCCCccHHHHHHHHhccCCC
Q 025344 183 DVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 231 (254)
Q Consensus 183 d~~~~i~~~~~dLeAG-A~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~ 231 (254)
.+.+++.|++| ||.|++ +|++.- +++++.++.+..++.
T Consensus 298 -----~e~a~~~l~~G~aD~V~i-GR~~la-----dPdl~~k~~~g~~l~ 336 (361)
T 3gka_A 298 -----LDSAQAALDAGQADAVAW-GKLFIA-----NPDLPRRFKLNAPLN 336 (361)
T ss_dssp -----HHHHHHHHHTTSCSEEEE-SHHHHH-----CTTHHHHHHHTCCCC
T ss_pred -----HHHHHHHHHcCCccEEEE-CHHhHh-----CcHHHHHHHhCCCCC
Confidence 56788889998 999988 665432 246788888877764
No 369
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=63.94 E-value=18 Score=30.13 Aligned_cols=91 Identities=13% Similarity=0.150 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHcCCCEEEecC--CcccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCcc
Q 025344 102 AFKEYVEDCKQVGFDTIELNV--GSLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISd--Gti~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~ 178 (254)
..-+..+.+.+.|.++|.|.+ |... +.... .+|+.+++. ++. +-+..
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~-~~~~~-~~i~~i~~~~~ip----v~v~g------------------------ 81 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFG-RGSNH-ELLAEVVGKLDVQ----VELSG------------------------ 81 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTT-SCCCH-HHHHHHHHHCSSE----EEEES------------------------
T ss_pred CHHHHHHHHHHcCCCEEEEEcCccccc-CCChH-HHHHHHHHhcCCc----EEEEC------------------------
Confidence 344556677888999999985 2211 11122 666666653 221 11110
Q ss_pred ccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceE
Q 025344 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 234 (254)
Q Consensus 179 ~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~kli 234 (254)
+..|+ ++++..+++||+.|++=+.-+.+ .+.+.++++.+| .+++
T Consensus 82 -gi~~~----~~~~~~l~~Gad~V~lg~~~l~~------p~~~~~~~~~~g-~~~~ 125 (244)
T 2y88_A 82 -GIRDD----ESLAAALATGCARVNVGTAALEN------PQWCARVIGEHG-DQVA 125 (244)
T ss_dssp -SCCSH----HHHHHHHHTTCSEEEECHHHHHC------HHHHHHHHHHHG-GGEE
T ss_pred -CCCCH----HHHHHHHHcCCCEEEECchHhhC------hHHHHHHHHHcC-CCEE
Confidence 01133 45778889999999986653322 467788887776 4443
No 370
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=63.72 E-value=44 Score=29.57 Aligned_cols=109 Identities=11% Similarity=0.106 Sum_probs=70.5
Q ss_pred hHHHHHHHhhcccccEEe-ec---CcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 025344 41 NVLEDIFESMGQFVDGLK-FS---GGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lK-fg---~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~ 116 (254)
.+.++-++.-++=||++= +| -|.....- +.+++-.+.|+++|+.+ =--+|.++....+.+..-.+.|.+.|-|
T Consensus 89 ~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~-~ei~~v~~a~~~~g~~l--KvIlEt~~L~d~e~i~~a~~ia~eaGAD 165 (260)
T 1p1x_A 89 AETRAAIAYGADEVDVVFPYRALMAGNEQVGF-DLVKACKEACAAANVLL--KVIIETGELKDEALIRKASEISIKAGAD 165 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCCHHHH-HHHHHHHHHHHHTTCEE--EEECCHHHHCSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEeccHHhhhCCCHHHHH-HHHHHHHHHhcccCCeE--EEEEecccCCcHHHHHHHHHHHHHhCCC
Confidence 577888999999999874 44 22222222 23777778888776531 1135777777644477888999999999
Q ss_pred EEEecCCcccC--ChhHHHHHHHHHHHcCCcccceeeeec
Q 025344 117 TIELNVGSLEI--PEETLLRYVRLVKSAGLKAKPKFAVMF 154 (254)
Q Consensus 117 ~IEISdGti~i--~~~~r~~lI~~~~~~G~~v~~E~g~k~ 154 (254)
.|--|.|+..- +.++=.-+-+.+++.| +-..+|+|-
T Consensus 166 fVKTSTGf~~~gAt~e~v~lm~~~I~~~~--~g~~v~VKa 203 (260)
T 1p1x_A 166 FIKTSTGKVAVNATPESARIMMEVIRDMG--VEKTVGFKP 203 (260)
T ss_dssp EEECCCSCSSCCCCHHHHHHHHHHHHHHT--CTTTCEEEC
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHhc--CCCCceEEE
Confidence 99999999854 4453322223334444 444577773
No 371
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=63.72 E-value=14 Score=33.54 Aligned_cols=143 Identities=16% Similarity=0.216 Sum_probs=84.1
Q ss_pred CCCCCCCceeEecCCC-CCCcchhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecC------C-c
Q 025344 19 EKPRRFGVTEMRSPHY-TLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST------G-D 90 (254)
Q Consensus 19 ~KPR~~GlT~V~DkG~-~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~------G-t 90 (254)
++|...-|--.+|=.+ .+..+...++.+.+.|-+| |+.+-.++|. .++.--+.++..+|.+++ | .
T Consensus 51 ~~~~~~~la~~IDhTlL~p~~T~~dI~~lc~eA~~~------g~aaVCV~P~-~V~~a~~~L~~s~V~V~tVigFP~G~~ 123 (288)
T 3oa3_A 51 PAPEVVSIAQIIDHTQLSLSATGSQIDVLCAEAKEY------GFATVCVRPD-YVSRAVQYLQGTQVGVTCVIGFHEGTY 123 (288)
T ss_dssp CCCCGGGGGGGEEEECCCTTCCHHHHHHHHHHHHHH------TCSEEEECGG-GHHHHHHHTTTSSCEEEEEESTTTSCS
T ss_pred CCCCHHHHHHhcCcccCCCCCCHHHHHHHHHHHHhc------CCcEEEECHH-HHHHHHHHcCCCCCeEEEEeCCCCCCC
Confidence 3444444555566554 0012556677777777654 7777667655 687777777777888764 3 2
Q ss_pred HHHHHHHhCCchHHHHHHHHHHcCCCEEE--ecCCcccC-ChhHHHHHHHHHHHc----CCcccceeeeecCCCCCCCcc
Q 025344 91 WAEHLIRNGPSAFKEYVEDCKQVGFDTIE--LNVGSLEI-PEETLLRYVRLVKSA----GLKAKPKFAVMFNKSDIPSDR 163 (254)
Q Consensus 91 l~E~a~~qg~~~~~~yl~~~k~lGF~~IE--ISdGti~i-~~~~r~~lI~~~~~~----G~~v~~E~g~k~~~s~v~~~~ 163 (254)
..|.-+.. .+++-+.|-|.|. |+-|.+.= ..+.-.+-|+.+++. .+||+-|-+.
T Consensus 124 ~~~~Kv~E--------a~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~----------- 184 (288)
T 3oa3_A 124 STDQKVSE--------AKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQ----------- 184 (288)
T ss_dssp CHHHHHHH--------HHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG-----------
T ss_pred cHHHHHHH--------HHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCC-----------
Confidence 33332222 4556778999998 44443321 123333444444442 2555554443
Q ss_pred ccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEe
Q 025344 164 DRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 164 d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiE 205 (254)
+ +.++++.-.+-..+||||+|=.=
T Consensus 185 -------L-----------t~eei~~A~~ia~eaGADfVKTS 208 (288)
T 3oa3_A 185 -------L-----------TADEIIAGCVLSSLAGADYVKTS 208 (288)
T ss_dssp -------C-----------CHHHHHHHHHHHHHTTCSEEECC
T ss_pred -------C-----------CHHHHHHHHHHHHHcCCCEEEcC
Confidence 2 36778888889999999999764
No 372
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=63.65 E-value=15 Score=32.41 Aligned_cols=125 Identities=13% Similarity=0.110 Sum_probs=72.5
Q ss_pred cCChhHHHHHHHHHHhCC--------ceecC--C--cHHHHHHHhC-CchHHHHHHHHHHcCCCEEEecCCcccCChhHH
Q 025344 66 LMPKPFIEEVVKRAHQHD--------VYVST--G--DWAEHLIRNG-PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETL 132 (254)
Q Consensus 66 l~~~~~l~eKi~l~~~~g--------V~v~~--G--tl~E~a~~qg-~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r 132 (254)
....+.++.-++.++++| |.+-+ . +|-|.-+.+. .+.+.++-+.+++.|.+.+-+| .+.
T Consensus 114 ~~G~~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~~GvV~s--------a~e 185 (255)
T 3ldv_A 114 SGGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLDGVVCS--------AQE 185 (255)
T ss_dssp GGCHHHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHTTCSEEECC--------HHH
T ss_pred cCCHHHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEEEC--------HHH
Confidence 445667887777777654 33332 2 3433211110 0135566667789999999877 234
Q ss_pred HHHHHHHHHcCCccc-ceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccc
Q 025344 133 LRYVRLVKSAGLKAK-PKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCK 211 (254)
Q Consensus 133 ~~lI~~~~~~G~~v~-~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d 211 (254)
.+.||.....+|... |=++.+ .++. +|- .++-..+..++|||++ ||=+|.||.
T Consensus 186 ~~~iR~~~g~~fl~VtPGIr~q--g~~~---~dQ--------------------~Rv~t~~~a~~aGad~-iVvGr~I~~ 239 (255)
T 3ldv_A 186 ASLLKQHLGREFKLVTPGIRPA--GSEQ---GDQ--------------------RRIMTPAQAIASGSDY-LVIGRPITQ 239 (255)
T ss_dssp HHHHHHHHCTTSEEEEECCCCT--TSTT---SSC--------------------SSSCCHHHHHHTTCSE-EEECHHHHT
T ss_pred HHHHHHhcCCCcEEEeCCcccC--cCCc---cce--------------------eccCCHHHHHHcCCCE-EEECHHHhC
Confidence 677888887888644 645543 2221 221 1234455668899996 555899998
Q ss_pred cCCCccHHHHHHHHh
Q 025344 212 HADSLRADIIAKVIG 226 (254)
Q Consensus 212 ~~g~~r~d~i~~ii~ 226 (254)
++.- ...+++|.+
T Consensus 240 a~dp--~~a~~~i~~ 252 (255)
T 3ldv_A 240 AAHP--EVVLEEINS 252 (255)
T ss_dssp CSCH--HHHHHHHHH
T ss_pred CCCH--HHHHHHHHH
Confidence 8753 344454443
No 373
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=63.54 E-value=9.5 Score=37.91 Aligned_cols=53 Identities=21% Similarity=0.397 Sum_probs=43.2
Q ss_pred CchHHHHHHHHHHcCCCEEEe---------cCCcccCC-hhHHHHHHHHHHHcCCcccceeee
Q 025344 100 PSAFKEYVEDCKQVGFDTIEL---------NVGSLEIP-EETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEI---------SdGti~i~-~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
++..++-++.+|++||++|++ ..|..+.+ ..+..++|+.|+++||.|+-..|-
T Consensus 31 ~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~VilrpGP 93 (595)
T 4e8d_A 31 PEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVRPSP 93 (595)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEecCC
Confidence 457888999999999999988 56776666 345789999999999999876444
No 374
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=63.53 E-value=13 Score=36.16 Aligned_cols=22 Identities=23% Similarity=0.179 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEE
Q 025344 183 DVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~Vii 204 (254)
++++.++.++..-++|+++|-+
T Consensus 226 ~~~~~~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 226 TFAETVELAQAIEAAGATIINT 247 (671)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEc
Confidence 5778888888888999999977
No 375
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=63.52 E-value=40 Score=28.96 Aligned_cols=107 Identities=10% Similarity=0.129 Sum_probs=65.3
Q ss_pred ChhHHHHHHHHHHhC--Ccee-c-----C-CcHHHHHHHhCCchHHHHHHHHHHc-CCCEEEecCCcccCChhHHHHHHH
Q 025344 68 PKPFIEEVVKRAHQH--DVYV-S-----T-GDWAEHLIRNGPSAFKEYVEDCKQV-GFDTIELNVGSLEIPEETLLRYVR 137 (254)
Q Consensus 68 ~~~~l~eKi~l~~~~--gV~v-~-----~-Gtl~E~a~~qg~~~~~~yl~~~k~l-GF~~IEISdGti~i~~~~r~~lI~ 137 (254)
+.+.+.+.+..++++ ++++ + . ||-++.- .+..-++++.+-++ ++++|.|---+. .+.+...++++
T Consensus 45 ~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~----~~~~~~ll~~~~~~~~~d~iDvEl~~~-~~~~~~~~l~~ 119 (238)
T 1sfl_A 45 TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFT----NDSYLNLISDLANINGIDMIDIEWQAD-IDIEKHQRIIT 119 (238)
T ss_dssp CHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCC----HHHHHHHHHHGGGCTTCCEEEEECCTT-SCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCC----HHHHHHHHHHHHHhCCCCEEEEEccCC-CChHHHHHHHH
Confidence 345688888888876 4433 1 2 6633211 01223344445555 699988854221 27777889999
Q ss_pred HHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 138 LVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 138 ~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
.+++.|-+++-=++- .... | +.+++++..++..+.|||.|=|
T Consensus 120 ~~~~~~~kvI~S~Hd---f~~t-------------p---------~~~el~~~~~~~~~~gaDivKi 161 (238)
T 1sfl_A 120 HLQQYNKEVIISHHN---FEST-------------P---------PLDELQFIFFKMQKFNPEYVKL 161 (238)
T ss_dssp HHHHTTCEEEEEEEE---SSCC-------------C---------CHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHhcCCEEEEEecC---CCCC-------------c---------CHHHHHHHHHHHHHcCCCEEEE
Confidence 999988887665554 1111 1 3578899999999999996543
No 376
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=63.17 E-value=7.7 Score=37.17 Aligned_cols=46 Identities=22% Similarity=0.218 Sum_probs=36.0
Q ss_pred HHHHHHcCCCEEEec---------CCccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELN---------VGSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEIS---------dGti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
|+++++|||++|.+| .|.-. + +.++..++|+.+.++|++|+-.+-.
T Consensus 37 ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (558)
T 1uok_A 37 LDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDLVV 101 (558)
T ss_dssp HHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 567899999999996 23221 2 3578999999999999999877655
No 377
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=63.06 E-value=9.8 Score=37.41 Aligned_cols=50 Identities=18% Similarity=0.325 Sum_probs=38.1
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 103 FKEYVEDCKQVGFDTIELNV-----------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd-----------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
+.+-++++++|||++|.|+- |.- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 108 i~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~V~ 178 (644)
T 3czg_A 108 VAERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADFVL 178 (644)
T ss_dssp HHHTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 44557888999999999962 221 12 2578999999999999999866644
No 378
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=63.05 E-value=84 Score=28.07 Aligned_cols=92 Identities=11% Similarity=0.104 Sum_probs=54.4
Q ss_pred hhHHHHHHHHHHhCCcee--cCCcHHHHHHHhCCchHHHHHHHHHHcC--CCEEEecCCcccCChhHHHHHHHHHHHc--
Q 025344 69 KPFIEEVVKRAHQHDVYV--STGDWAEHLIRNGPSAFKEYVEDCKQVG--FDTIELNVGSLEIPEETLLRYVRLVKSA-- 142 (254)
Q Consensus 69 ~~~l~eKi~l~~~~gV~v--~~Gtl~E~a~~qg~~~~~~yl~~~k~lG--F~~IEISdGti~i~~~~r~~lI~~~~~~-- 142 (254)
.+.+++.++.+++.|+.+ ..|.-- ..-+..+.+.+.| +++|+++-.. - ......+.|+.+++.
T Consensus 80 ~~~~~~~i~~~~~~g~~v~v~~g~~~---------~~~~~a~~~~~~g~~~~~i~i~~~~-G-~~~~~~~~i~~lr~~~~ 148 (336)
T 1ypf_A 80 PEKRISFIRDMQSRGLIASISVGVKE---------DEYEFVQQLAAEHLTPEYITIDIAH-G-HSNAVINMIQHIKKHLP 148 (336)
T ss_dssp GGGHHHHHHHHHHTTCCCEEEECCSH---------HHHHHHHHHHHTTCCCSEEEEECSS-C-CSHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHhcCCeEEEeCCCCH---------HHHHHHHHHHhcCCCCCEEEEECCC-C-CcHHHHHHHHHHHHhCC
Confidence 345777788888777532 223211 1113355667778 9999985321 1 334455778888775
Q ss_pred CCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEe
Q 025344 143 GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 143 G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiE 205 (254)
+..+. +. .+ . + .+.+++.+++|||.|++-
T Consensus 149 ~~~vi----~G----~v-----------~-----------s----~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 149 ESFVI----AG----NV-----------G-----------T----PEAVRELENAGADATKVG 177 (336)
T ss_dssp TSEEE----EE----EE-----------C-----------S----HHHHHHHHHHTCSEEEEC
T ss_pred CCEEE----EC----Cc-----------C-----------C----HHHHHHHHHcCCCEEEEe
Confidence 22221 10 00 1 2 578899999999999993
No 379
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=62.90 E-value=24 Score=31.66 Aligned_cols=19 Identities=11% Similarity=0.170 Sum_probs=15.6
Q ss_pred HHHHHHHHHcCCCEEEecC
Q 025344 104 KEYVEDCKQVGFDTIELNV 122 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISd 122 (254)
.+..+.+.+.|.|+|-+|+
T Consensus 192 ~~~a~~a~~~Gad~I~v~~ 210 (349)
T 1p0k_A 192 KASAGKLYEAGAAAVDIGG 210 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcC
Confidence 3456788999999999975
No 380
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=62.82 E-value=10 Score=34.18 Aligned_cols=60 Identities=17% Similarity=0.161 Sum_probs=44.2
Q ss_pred HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc--------CCh---hHHHHHHHHHHHcCCcccceeee
Q 025344 92 AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE--------IPE---ETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 92 ~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~--------i~~---~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
+|..+.. +...++.++.++++||++|-|.-+.-. ++. +...++|+.++++|++|+-.++-
T Consensus 53 ~e~~W~~-~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~ 123 (380)
T 1edg_A 53 YETSWSG-IKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHH 123 (380)
T ss_dssp HHHHTTC-SCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred ccCcCCC-CcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCC
Confidence 5666543 345688999999999999999754221 222 34467899999999999988775
No 381
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=62.80 E-value=1.5 Score=38.02 Aligned_cols=102 Identities=11% Similarity=0.060 Sum_probs=66.4
Q ss_pred ceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCc-HHHHHHHhCCchHH
Q 025344 26 VTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFK 104 (254)
Q Consensus 26 lT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gt-l~E~a~~qg~~~~~ 104 (254)
+=+=+|+. .+....++++.+++|+|++|++..-..-+..+ -|+.++++|..+..-- +. -.|+.+.
T Consensus 17 ~ilalD~~-----~l~~~~~~~~~~~~~v~~~Kv~~d~~~~~G~~----~v~~lr~~~~~v~lD~kl~-----Dip~t~~ 82 (245)
T 1eix_A 17 VVVALDYH-----NRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQ----FVRELQQRGFDIFLDLKFH-----DIPNTAA 82 (245)
T ss_dssp EEEEECCS-----SHHHHHHHHTTSCTTTCEEEEEHHHHHHHHHH----HHHHHHHTTCCEEEEEEEC-----SCHHHHH
T ss_pred eEEEECCC-----CHHHHHHHHHHhCccCcEEEEcHHHHHHhCHH----HHHHHHHCCCcEEEEeecc-----ccHHHHH
Confidence 44446663 55788889999999999999997664333333 3444566654443321 21 1234566
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCC
Q 025344 105 EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~ 144 (254)
.|++.+.++|.|+|-|+-- ...+.-.++++.+++.|.
T Consensus 83 ~~i~~~~~~Gad~vTvH~~---~g~~~l~~~~~~~~~~G~ 119 (245)
T 1eix_A 83 HAVAAAADLGVWMVNVHAS---GGARMMTAAREALVPFGK 119 (245)
T ss_dssp HHHHHHHHHTCSEEEEBGG---GCHHHHHHHHHTTGGGGG
T ss_pred HHHHHHHhCCCCEEEEecc---CCHHHHHHHHHHHHHcCC
Confidence 7888889999999998753 234445578888777765
No 382
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=62.79 E-value=7.3 Score=34.06 Aligned_cols=49 Identities=10% Similarity=0.164 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc--CC---------------hhHHHHHHHHHHHcCCccccee
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLE--IP---------------EETLLRYVRLVKSAGLKAKPKF 150 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~--i~---------------~~~r~~lI~~~~~~G~~v~~E~ 150 (254)
.+++-++.+|++||++|-+.-..-. -| .+...++|+.++++|++|+-++
T Consensus 46 ~~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 46 TFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 6888999999999999998632210 01 1234689999999999999887
No 383
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=62.61 E-value=7.8 Score=38.03 Aligned_cols=50 Identities=18% Similarity=0.292 Sum_probs=37.9
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 103 FKEYVEDCKQVGFDTIELNV-----------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd-----------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
+.+-++++++|||++|.++= |.-. + +.++..++|+.+.++|++|+-.+-.
T Consensus 115 i~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~V~ 185 (628)
T 1g5a_A 115 LKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIF 185 (628)
T ss_dssp HHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 44557888999999999862 3221 2 2588999999999999999866544
No 384
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=62.59 E-value=60 Score=29.17 Aligned_cols=133 Identities=15% Similarity=0.150 Sum_probs=76.8
Q ss_pred HHhhcc-cccEEeecCcccccCChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc
Q 025344 47 FESMGQ-FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS 124 (254)
Q Consensus 47 Le~ag~-yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~G-tl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt 124 (254)
++...+ -.||+=+-||.-.......+.---.+.+++|+.+.+= |- .-.++..+++.+..++++|++.|=.=.|-
T Consensus 45 ~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc----~~~~~~~l~~~L~~~~~~GI~nILaLrGD 120 (304)
T 3fst_A 45 IDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTC----IDATPDELRTIARDYWNNGIRHIVALRGD 120 (304)
T ss_dssp HHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEES----TTSCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeec----CCCCHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 344433 3677777776665554444543233455689977662 32 12344468899999999999988754443
Q ss_pred ccC----ChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCC
Q 025344 125 LEI----PEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGA 199 (254)
Q Consensus 125 i~i----~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA 199 (254)
..- +...=.+||+.+++. +| .+|+-.- + ++++. ..+.+.-++..++-++|||
T Consensus 121 pp~~~~~~~~~A~dLv~~ir~~~~f----~IgvA~y----P-E~Hp~--------------a~~~~~d~~~Lk~KvdAGA 177 (304)
T 3fst_A 121 LPPGSGKPEMYASDLVTLLKEVADF----DISVAAY----P-EVHPE--------------AKSAQADLLNLKRKVDAGA 177 (304)
T ss_dssp CC------CCCHHHHHHHHHHHCCC----EEEEEEC----T-TCCTT--------------CSCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCC----eEEEEeC----C-CcCCC--------------CCCHHHHHHHHHHHHHcCC
Confidence 211 112223555555543 23 3455210 0 11221 1256777999999999999
Q ss_pred cEEEEec
Q 025344 200 DMIMIDS 206 (254)
Q Consensus 200 ~~ViiEa 206 (254)
+++|.--
T Consensus 178 df~iTQ~ 184 (304)
T 3fst_A 178 NRAITQF 184 (304)
T ss_dssp CEEEECC
T ss_pred CEEEeCc
Confidence 9999754
No 385
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=62.46 E-value=29 Score=32.24 Aligned_cols=132 Identities=17% Similarity=0.102 Sum_probs=80.4
Q ss_pred HHHHHhCCceecC----Cc-H----HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChh--HHHHHHHHHHHcCC
Q 025344 76 VKRAHQHDVYVST----GD-W----AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGL 144 (254)
Q Consensus 76 i~l~~~~gV~v~~----Gt-l----~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~ 144 (254)
..++++++|+|.. |. + ++.++. ..++|+..+-+.||+.|=|.-...++.+- .=.++++++...|.
T Consensus 92 ~~~A~~~~VPVaLHlDHg~~~~~~~i~~~i~----a~~~~~~~~~~~GFtSVMiDgS~lp~eENI~~Tk~vv~~ah~~gv 167 (357)
T 3qm3_A 92 HLLAKAYGVPVILHTDHAARKLLPWIDGLIE----ANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLDALGV 167 (357)
T ss_dssp HHHHHHHTCEEEEEECCCCGGGHHHHHHHHH----HHHHHHHHHSSCSCSEEECCCTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCCcEEEECCCCCccchHHHHHHHH----HhHHHHhhhcCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 4678889999985 53 2 333433 23678888889999999996665544332 22377888999999
Q ss_pred cccceeeeecCCCCCCCccccc-----cccccccCCCccccccCHHHHHHHHHHH-HHcCCcEEEEe---cccccc-cCC
Q 025344 145 KAKPKFAVMFNKSDIPSDRDRA-----FGAYVARAPRSTEYVEDVDLLIRRAERC-LEAGADMIMID---SDDVCK-HAD 214 (254)
Q Consensus 145 ~v~~E~g~k~~~s~v~~~~d~~-----~~~~~~~~~~~~~~~~d~~~~i~~~~~d-LeAGA~~ViiE---argi~d-~~g 214 (254)
-|--|+|.=-+. +++.. .+..+| ||++..+.+++- ...|.|.+=+= +-|.|. .+=
T Consensus 168 sVEaELG~igG~-----Edgv~~~~~~~~~~yT----------~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p 232 (357)
T 3qm3_A 168 ALEIELGCTGGE-----EDGVDNTGIDNSKLYT----------QPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNV 232 (357)
T ss_dssp EEEEECCCCCC----------CCSSTTCTTTSC----------CHHHHHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCC
T ss_pred eEEEEeeeeccc-----cCCccccccccccccC----------CHHHHHHHHHHhCCCCcccEEEEecCCccCCcCCCCC
Confidence 999999983211 11110 011122 677766666542 11145555442 238996 344
Q ss_pred CccHHHHHHHHh
Q 025344 215 SLRADIIAKVIG 226 (254)
Q Consensus 215 ~~r~d~i~~ii~ 226 (254)
.++.+.+.+|-+
T Consensus 233 ~L~~~~L~~i~~ 244 (357)
T 3qm3_A 233 SLQPEILKNSQK 244 (357)
T ss_dssp CCCTHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 678888888754
No 386
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=62.40 E-value=8.3 Score=37.40 Aligned_cols=47 Identities=19% Similarity=0.242 Sum_probs=36.5
Q ss_pred HHHHHHHcCCCEEEecC---------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 025344 106 YVEDCKQVGFDTIELNV---------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 106 yl~~~k~lGF~~IEISd---------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
=|+++++|||++|.+|- |.-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 45 ~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 110 (589)
T 3aj7_A 45 KLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVI 110 (589)
T ss_dssp THHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 35788999999999852 33221 3688999999999999999876654
No 387
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=62.10 E-value=66 Score=29.83 Aligned_cols=171 Identities=12% Similarity=0.143 Sum_probs=97.0
Q ss_pred chhHHHHHHHhhccccc--EEeecCcccccC-----Chh------------HHHHHHHHHHhCCceecC----C-c----
Q 025344 39 SHNVLEDIFESMGQFVD--GLKFSGGSHSLM-----PKP------------FIEEVVKRAHQHDVYVST----G-D---- 90 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID--~lKfg~GT~~l~-----~~~------------~l~eKi~l~~~~gV~v~~----G-t---- 90 (254)
++..++.+|+.|-+.=- +|-++-|+...+ +.. ...--..++++++|+|.. | +
T Consensus 38 n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~~~~i~ga~~~~~~v~~~A~~~~VPVaLHlDHg~~~~~~ 117 (358)
T 1dos_A 38 GTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLP 117 (358)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHHHhcCCCccccchhhhHHHhHHHHHHHHHHHHHHCCCCEEEECCCCCCccHH
Confidence 45666666665543211 466666654333 110 134444577889999985 5 3
Q ss_pred HHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChh--HHHHHHHHHHHcCCcccceeeeecCCC-CCCCcccccc
Q 025344 91 WAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNKS-DIPSDRDRAF 167 (254)
Q Consensus 91 l~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~~v~~E~g~k~~~s-~v~~~~d~~~ 167 (254)
|++.++.- .++|+..+-+.||+.|=|.-...++.+- .=.++++++...|.-|--|+|.=-+.. .+.. .+...
T Consensus 118 ~i~~~i~a----~~~~~~~~~~~gFtSVMiDgS~~p~eENI~~Tkevv~~ah~~gvsVEaELG~vGG~EDgv~~-~~~~~ 192 (358)
T 1dos_A 118 WIDGLLDA----GEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTGGEEDGVDN-SHMDA 192 (358)
T ss_dssp HHHHHHHH----HHHHHHHHSSCSCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCCCCCCCSC-CCCCC
T ss_pred HHHHHHHH----HHHHHHhcccCCCceEeecCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeccccCcCCCccc-ccccc
Confidence 36665544 3677888888889999886554433322 224678889999999999999842211 0100 00000
Q ss_pred ccccccCCCccccccCHHHHHHHHHHHHHcCCc---EEEEe---cccccc-cCCCccHHHHHHHHh
Q 025344 168 GAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD---MIMID---SDDVCK-HADSLRADIIAKVIG 226 (254)
Q Consensus 168 ~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~---~ViiE---argi~d-~~g~~r~d~i~~ii~ 226 (254)
+..+| ||++..+.+++- -|.| .+=+= +-|.|. .+-.++.+.+.+|-+
T Consensus 193 ~~~yT----------~Peea~~fv~~t--tgvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~ 246 (358)
T 1dos_A 193 SALYT----------QPEDVDYAYTEL--SKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQE 246 (358)
T ss_dssp CCCSC----------CHHHHHHHHHHH--HTTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHH
T ss_pred ccccC----------CHHHHHHHHHHh--cCCChhceEEEecccccCccCCCCCCcCHHHHHHHHH
Confidence 01123 566555544431 1555 32221 128895 567788999988855
No 388
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=62.01 E-value=8.5 Score=37.94 Aligned_cols=46 Identities=26% Similarity=0.168 Sum_probs=35.0
Q ss_pred HHHHHHcCCCEEEecCCcc----------------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 107 VEDCKQVGFDTIELNVGSL----------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti----------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
|+++++|||++|.||==+- .| +.++..+||+.+.++|++|+-.+-.
T Consensus 58 LdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~ 130 (686)
T 1qho_A 58 LPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFVP 130 (686)
T ss_dssp HHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 5677999999999983211 11 2578999999999999998766543
No 389
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=62.01 E-value=42 Score=29.29 Aligned_cols=104 Identities=10% Similarity=0.107 Sum_probs=64.5
Q ss_pred ChhHHHHHHHHHHhC--Cce-ec-----C-CcHH-HHHHHhCCchHHHHHHHHHHcC-CCEEEecCCcccCChhHHHHHH
Q 025344 68 PKPFIEEVVKRAHQH--DVY-VS-----T-GDWA-EHLIRNGPSAFKEYVEDCKQVG-FDTIELNVGSLEIPEETLLRYV 136 (254)
Q Consensus 68 ~~~~l~eKi~l~~~~--gV~-v~-----~-Gtl~-E~a~~qg~~~~~~yl~~~k~lG-F~~IEISdGti~i~~~~r~~lI 136 (254)
+.+.+.+-+..++++ +++ ++ . ||-+ +.-- +..-++++.+-++| +++|.|-- ..+. ...+++
T Consensus 61 ~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~----~~~~~ll~~~~~~g~~d~iDvEl---~~~~-~~~~l~ 132 (257)
T 2yr1_A 61 DQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNE----AEVRRLIEAICRSGAIDLVDYEL---AYGE-RIADVR 132 (257)
T ss_dssp CHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCH----HHHHHHHHHHHHHTCCSEEEEEG---GGTT-HHHHHH
T ss_pred cHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCH----HHHHHHHHHHHHcCCCCEEEEEC---CCCh-hHHHHH
Confidence 345577777777765 442 21 1 5533 2110 12344566667788 99987753 2344 667889
Q ss_pred HHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 137 RLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 137 ~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
+.+++.|-+++-=++- .... | +.+++++..++..+.|||.|=|
T Consensus 133 ~~~~~~~~kvI~S~Hd---f~~t-------------P---------~~~el~~~~~~~~~~gaDivKi 175 (257)
T 2yr1_A 133 RMTEECSVWLVVSRHY---FDGT-------------P---------RKETLLADMRQAERYGADIAKV 175 (257)
T ss_dssp HHHHHTTCEEEEEEEE---SSCC-------------C---------CHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHhCCCEEEEEecC---CCCC-------------c---------CHHHHHHHHHHHHhcCCCEEEE
Confidence 9899988877665554 1111 1 3578899999999999996533
No 390
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=61.89 E-value=9.5 Score=33.99 Aligned_cols=49 Identities=10% Similarity=0.060 Sum_probs=38.5
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChh-HHHHHHHHHHhCCceec
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKP-FIEEVVKRAHQHDVYVS 87 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~-~l~eKi~l~~~~gV~v~ 87 (254)
......++++..++||+++|.|.--..-+..+ .+++..++++++|..|+
T Consensus 40 ~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~~v~~L~~l~~~~g~~If 89 (267)
T 3gdm_A 40 TTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLF 89 (267)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECGGGCSSCCTTTTHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHhCCcCcEEEECHHHHHhcCHHHHHHHHHHHHhhcCCeEE
Confidence 56788999999999999999997776666666 77777777766665443
No 391
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=61.88 E-value=7.3 Score=36.42 Aligned_cols=47 Identities=19% Similarity=0.245 Sum_probs=36.2
Q ss_pred HHHHH--------HHcCCCEEEecC--------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 106 YVEDC--------KQVGFDTIELNV--------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 106 yl~~~--------k~lGF~~IEISd--------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
=|+++ ++|||++|.++- |.- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 32 ~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 32 KLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp THHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred hhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 36778 999999999973 211 11 3689999999999999999876654
No 392
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=61.76 E-value=58 Score=30.47 Aligned_cols=94 Identities=11% Similarity=0.117 Sum_probs=58.4
Q ss_pred ccEEee--cCcccccCChhHHHHHHHHHHhCCceecC---C-cHHHH----HHHhCC----------------chHHHHH
Q 025344 54 VDGLKF--SGGSHSLMPKPFIEEVVKRAHQHDVYVST---G-DWAEH----LIRNGP----------------SAFKEYV 107 (254)
Q Consensus 54 ID~lKf--g~GT~~l~~~~~l~eKi~l~~~~gV~v~~---G-tl~E~----a~~qg~----------------~~~~~yl 107 (254)
+..+|+ ++......+.+.|++.++.++++|+.+.. . .+.+. +...|. ..+..-+
T Consensus 143 ~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i 222 (490)
T 3dc8_A 143 INTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAI 222 (490)
T ss_dssp CCEEEEESCSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCCccCCHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHH
Confidence 344554 23333344667788888888888876553 2 23321 111111 1355567
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 025344 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 108 ~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
..++..|... -| .-++..+-.++|+.+++.|+.|..|+..
T Consensus 223 ~la~~~g~~l-hi----~HvSt~~~~~li~~ak~~G~~Vt~e~~p 262 (490)
T 3dc8_A 223 MIADMAGCPV-YI----VHTSCEQAHEAIRRARAKGMRVFGEPLI 262 (490)
T ss_dssp HHHHHHTCCE-EE----SSCCSHHHHHHHHHHHHTTCCEEECCBH
T ss_pred HHHHHhCCcE-EE----EeCCCHHHHHHHHHHHHCCCeEEEEEch
Confidence 7777888653 22 3456688889999999999999888865
No 393
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=61.48 E-value=68 Score=26.45 Aligned_cols=165 Identities=12% Similarity=0.145 Sum_probs=89.4
Q ss_pred CCCceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCChh--HHHHHHHHHHhC--------CceecCC--c
Q 025344 23 RFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKP--FIEEVVKRAHQH--------DVYVSTG--D 90 (254)
Q Consensus 23 ~~GlT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~--~l~eKi~l~~~~--------gV~v~~G--t 90 (254)
..|++.++.++. .+...+.+++.+..|=+ +..+.|.......+ .+++.-+++... |+..++. +
T Consensus 31 ~~Gv~~~v~~~~----~~~~~~~~~~~~~~~p~-~~~~~g~hP~~~~~~~~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~ 105 (265)
T 1yix_A 31 ARDVKFCLAVAT----TLPSYLHMRDLVGERDN-VVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYTPET 105 (265)
T ss_dssp HTTEEEEEECCS----SHHHHHHHHHHHCSCTT-EEEEECCCTTCCSSCCCHHHHHHHHTSTTEEEEEEEEEECTTCSSC
T ss_pred HCCCCEEEEeCC----CHHHHHHHHHHHHHCCC-eEEEEEeCCCcccccchHHHHHHHhccCCeEEEEccccCCCcCCCC
Confidence 469988888774 45677778888877766 55555654433321 144444444322 3333331 2
Q ss_pred HHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccc
Q 025344 91 WAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAY 170 (254)
Q Consensus 91 l~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~ 170 (254)
...+.. .+.+.++.|+++|...+==+.. +.+ ++++.+++.|+.... .+- ++ .
T Consensus 106 ---~~~q~~--~~~~~~~~a~~~~~pv~iH~~~----~~~---~~~~~l~~~~~p~~~--~v~--H~-~----------- 157 (265)
T 1yix_A 106 ---KVRQQE--SFIHHIQIGRELNKPVIVHTRD----ARA---DTLAILREEKVTDCG--GVL--HC-F----------- 157 (265)
T ss_dssp ---HHHHHH--HHHHHHHHHHHHTCCEEEEEES----CHH---HHHHHHHHTTGGGTC--EEE--TT-C-----------
T ss_pred ---hHHHHH--HHHHHHHHHHHhCCCEEEEecC----chH---HHHHHHHhcCCCCCC--EEE--Ec-C-----------
Confidence 122333 7889999999999886632221 233 444445554332100 110 10 0
Q ss_pred cccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceEEecCCc
Q 025344 171 VARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (254)
Q Consensus 171 ~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~klifEAP~k 240 (254)
+ .| .+.++..++.|++.-+ .|.+... +...+.++++.+|.+|||||..-|
T Consensus 158 -~--~~-----------~~~~~~~~~~g~~~~~---sg~~~~~---~~~~~~~~~~~~~~drll~~TD~P 207 (265)
T 1yix_A 158 -T--ED-----------RETAGKLLDLGFYISF---SGIVTFR---NAEQLRDAARYVPLDRLLVETDSP 207 (265)
T ss_dssp -C--SC-----------HHHHHHHHTTTCEEEE---CGGGGST---TCHHHHHHHHHSCGGGEEECCCBT
T ss_pred -C--CC-----------HHHHHHHHHCCcEEEE---CCccccC---chHHHHHHHHhCChHHEEEecCCC
Confidence 0 01 3445566667765433 2332211 124567888899999999998754
No 394
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=61.45 E-value=51 Score=30.07 Aligned_cols=96 Identities=11% Similarity=0.071 Sum_probs=63.0
Q ss_pred ccccEEeecCcc--cccCChhHHHHHHHHHHhCCceecC---C-cHHHHH----HHhC----------------CchHHH
Q 025344 52 QFVDGLKFSGGS--HSLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHL----IRNG----------------PSAFKE 105 (254)
Q Consensus 52 ~yID~lKfg~GT--~~l~~~~~l~eKi~l~~~~gV~v~~---G-tl~E~a----~~qg----------------~~~~~~ 105 (254)
.-++.+|+.... ....+.+.+++.++.++++|+.+.. . .+.+.. ...| ...+.+
T Consensus 144 ~G~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~ 223 (461)
T 3sfw_A 144 EGITSLKVFMAYKNVLMADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGR 223 (461)
T ss_dssp SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHH
T ss_pred CCCCEEEEEEecCCCcccCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHH
Confidence 345667765432 1356777899999999999997764 2 343322 1111 114566
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 025344 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
.+..++..|... -| ..++..+-.++|+.+++.|+.|..|+..
T Consensus 224 ~~~la~~~g~~~-hi----~H~s~~~~l~~i~~ak~~G~~vt~e~~p 265 (461)
T 3sfw_A 224 AIALTALADAQL-YV----VHVSCADAVRRIAEAREKGWNVYGETCP 265 (461)
T ss_dssp HHHHHHHTTCEE-EE----CSCCSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred HHHHHHHhCCCE-EE----EecCcHHHHHHHHHHHhcCCcEEEeecc
Confidence 778888888763 22 2345577789999999999998777655
No 395
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=61.43 E-value=4.5 Score=34.35 Aligned_cols=64 Identities=16% Similarity=0.182 Sum_probs=51.8
Q ss_pred HHHhCCc-eecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChh--HHHHHHHHHHHcCCcccc
Q 025344 78 RAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 78 l~~~~gV-~v~~-Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~~v~~ 148 (254)
+++++|| .+.- |--.++|+.+- .. .+.++||+.+=++|.+-+.+.+ .....++++++.|-.+.+
T Consensus 148 ~L~~~gi~~l~i~G~~t~~CV~~T--a~-----~a~~~g~~v~v~~Da~~~~~~~~~~~~~al~~m~~~Gv~i~~ 215 (216)
T 3v8e_A 148 YLEKHHTDEVYIVGVALEYXVKAT--AI-----SAAELGYKTTVLLDYTRPISDDPEVINKVKEELKAHNINVVD 215 (216)
T ss_dssp HHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSSCCHHHHHHHHHHHHHTTCEEEC
T ss_pred HHHhCCCCEEEEEEeccccHHHHH--HH-----HHHHCCCEEEEeccccCCCCcccHHHHHHHHHHHHcCCEEeC
Confidence 5577898 4444 76788888875 33 3567999999999999999999 999999999999887654
No 396
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=61.42 E-value=14 Score=32.76 Aligned_cols=53 Identities=9% Similarity=-0.043 Sum_probs=39.0
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCc------c-----cCC---hhHHHHHHHHHHHcCCcccceeee
Q 025344 100 PSAFKEYVEDCKQVGFDTIELNVGS------L-----EIP---EETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGt------i-----~i~---~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
+..+++.++.+|++||++|-+.--+ + ..+ .+..-++|+.++++|++|+-++.-
T Consensus 41 ~~~~~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~~ 107 (373)
T 1rh9_A 41 RIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVN 107 (373)
T ss_dssp THHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred HHHHHHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4579999999999999999975321 1 111 223456889999999999987653
No 397
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=61.30 E-value=30 Score=30.40 Aligned_cols=123 Identities=15% Similarity=0.192 Sum_probs=69.9
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecC------C-cHHHHHHHhCCchHHHHHHHHH
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST------G-DWAEHLIRNGPSAFKEYVEDCK 111 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~------G-tl~E~a~~qg~~~~~~yl~~~k 111 (254)
+...++.+++.|-+| ++.+-.++|. .++.--+.++..+|.+++ | .-.|.- +.+ .+++-
T Consensus 41 t~~~i~~lc~eA~~~------~~~aVcV~p~-~v~~a~~~L~~s~v~v~tVigFP~G~~~~~~K-------v~E-a~~Ai 105 (239)
T 3ngj_A 41 TEEQIRKLCSEAAEY------KFASVCVNPT-WVPLCAELLKGTGVKVCTVIGFPLGATPSEVK-------AYE-TKVAV 105 (239)
T ss_dssp CHHHHHHHHHHHHHH------TCSEEEECGG-GHHHHHHHHTTSSCEEEEEESTTTCCSCHHHH-------HHH-HHHHH
T ss_pred CHHHHHHHHHHHHhc------CCcEEEECHH-HHHHHHHHhCCCCCeEEEEeccCCCCCchHHH-------HHH-HHHHH
Confidence 556677777777654 6666556554 577666777777777653 3 122222 222 34455
Q ss_pred HcCCCEEEecCCcccC---ChhHHHHHHHHHHHc----CCcccceeeeecCCCCCCCccccccccccccCCCccccccCH
Q 025344 112 QVGFDTIELNVGSLEI---PEETLLRYVRLVKSA----GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDV 184 (254)
Q Consensus 112 ~lGF~~IEISdGti~i---~~~~r~~lI~~~~~~----G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~ 184 (254)
+.|-|.|.+-=..-.+ ..+.-.+-|+.+++. -+||+-|.+. + +.
T Consensus 106 ~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~------------------L-----------t~ 156 (239)
T 3ngj_A 106 EQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCY------------------L-----------TN 156 (239)
T ss_dssp HTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGG------------------S-----------CH
T ss_pred HcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCC------------------C-----------CH
Confidence 6799998864322211 112222333333332 2555555443 2 36
Q ss_pred HHHHHHHHHHHHcCCcEEEEe
Q 025344 185 DLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 185 ~~~i~~~~~dLeAGA~~ViiE 205 (254)
++++.-.+-..+||||+|=+=
T Consensus 157 eei~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 157 EEKVEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp HHHHHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHHHHHHCcCEEECC
Confidence 677888888899999999775
No 398
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=61.27 E-value=21 Score=29.49 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=63.2
Q ss_pred HHHHHHhhccc-ccEEeec-Ccccc-cCChhHHHHHHHHHHhCCceecC-Cc---HH---HHHHHhCCchHHHHHHHHHH
Q 025344 43 LEDIFESMGQF-VDGLKFS-GGSHS-LMPKPFIEEVVKRAHQHDVYVST-GD---WA---EHLIRNGPSAFKEYVEDCKQ 112 (254)
Q Consensus 43 ~~DlLe~ag~y-ID~lKfg-~GT~~-l~~~~~l~eKi~l~~~~gV~v~~-Gt---l~---E~a~~qg~~~~~~yl~~~k~ 112 (254)
+++.++.+.+. +|.+=+. ..... ......+++.-++++++|+.+.. +. |. +....+..+.+++.++.|+.
T Consensus 16 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 95 (278)
T 1i60_A 16 LKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKT 95 (278)
T ss_dssp HHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45555544433 5666665 43211 11224478888999999997763 21 21 11111111268899999999
Q ss_pred cCCCEEEecCCcccCCh---hHH-------HHHHHHHHHcCCcccceeee
Q 025344 113 VGFDTIELNVGSLEIPE---ETL-------LRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 113 lGF~~IEISdGti~i~~---~~r-------~~lI~~~~~~G~~v~~E~g~ 152 (254)
+|.+.|-+.-|...-+. +.+ .++.+.+++.|.++.-|-.-
T Consensus 96 lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~ 145 (278)
T 1i60_A 96 LGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVG 145 (278)
T ss_dssp HTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCC
T ss_pred cCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecC
Confidence 99999998666543221 222 24445566677776666543
No 399
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=61.08 E-value=17 Score=31.15 Aligned_cols=21 Identities=24% Similarity=0.392 Sum_probs=17.5
Q ss_pred HHHHcCCcEEEEecccccccCC
Q 025344 193 RCLEAGADMIMIDSDDVCKHAD 214 (254)
Q Consensus 193 ~dLeAGA~~ViiEargi~d~~g 214 (254)
..+++|||++|| +|+||.+..
T Consensus 175 ~a~~~Gad~iVV-GR~I~~A~d 195 (222)
T 4dbe_A 175 DAVCAGADYEII-GRSIYNAGN 195 (222)
T ss_dssp HHHHHTCSEEEE-CHHHHTSSS
T ss_pred HHHHcCCCEEEE-CHHhcCCCC
Confidence 446799999888 999999865
No 400
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=61.02 E-value=8.1 Score=34.22 Aligned_cols=77 Identities=17% Similarity=0.135 Sum_probs=41.5
Q ss_pred hhHHHHHHHhhcccccE-------EeecCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHH
Q 025344 40 HNVLEDIFESMGQFVDG-------LKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQ 112 (254)
Q Consensus 40 ~~~~~DlLe~ag~yID~-------lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~ 112 (254)
....+.+.+.-.+.|+. .|...|+..+-..+.|++. .+..++++..+.+. + . .+..+.+.+
T Consensus 31 ~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I---~~~~~iPv~~k~r~------g--~-~~~~~~~~a 98 (305)
T 2nv1_A 31 AEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEV---MNAVSIPVMAKARI------G--H-IVEARVLEA 98 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHH---HHHCSSCEEEEECT------T--C-HHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHH---HHhCCCCEEecccc------c--c-hHHHHHHHH
Confidence 35666766666677743 3555565444445545533 45667776533110 0 0 344566677
Q ss_pred cCCCEEEecCCcccCChhH
Q 025344 113 VGFDTIELNVGSLEIPEET 131 (254)
Q Consensus 113 lGF~~IEISdGti~i~~~~ 131 (254)
.|.+.|- ++-.++.++
T Consensus 99 ~GAd~V~---~~~~l~~~~ 114 (305)
T 2nv1_A 99 MGVDYID---ESEVLTPAD 114 (305)
T ss_dssp HTCSEEE---ECTTSCCSC
T ss_pred CCCCEEE---EeccCCHHH
Confidence 9999995 333445444
No 401
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=60.99 E-value=22 Score=32.52 Aligned_cols=119 Identities=18% Similarity=0.233 Sum_probs=66.9
Q ss_pred HHHHHHHHHHh------CCceecCCc-HHHHHHHhCCch---HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH
Q 025344 71 FIEEVVKRAHQ------HDVYVSTGD-WAEHLIRNGPSA---FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK 140 (254)
Q Consensus 71 ~l~eKi~l~~~------~gV~v~~Gt-l~E~a~~qg~~~---~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~ 140 (254)
.+.|.++-.++ -+|+++++. |-..- .+... +.++.+.+.+.|.++|++|.++..-....-..+++.++
T Consensus 213 ~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~--~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~ 290 (364)
T 1vyr_A 213 LVLEVVDAVCNEWSADRIGIRVSPIGTFQNVD--NGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVR 290 (364)
T ss_dssp HHHHHHHHHHHHSCGGGEEEEECCSSCBTTBC--CCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCcEEEEEcccccccccc--CCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHH
Confidence 45566666554 234567753 31100 01113 34567777888999999999754211111135666666
Q ss_pred HcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcC-CcEEEEecccccccCCCccHH
Q 025344 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRAD 219 (254)
Q Consensus 141 ~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAG-A~~ViiEargi~d~~g~~r~d 219 (254)
+. +.+. .--.| . + + .+.+++.|++| ||.|++ +|+++.+ ++
T Consensus 291 ~~-------~~iP--vi~~G--------g-i-----------t----~~~a~~~l~~g~aD~V~~-gR~~l~~-----P~ 331 (364)
T 1vyr_A 291 ER-------FHGV--IIGAG--------A-Y-----------T----AEKAEDLIGKGLIDAVAF-GRDYIAN-----PD 331 (364)
T ss_dssp HH-------CCSE--EEEES--------S-C-----------C----HHHHHHHHHTTSCSEEEE-SHHHHHC-----TT
T ss_pred HH-------CCCC--EEEEC--------C-c-----------C----HHHHHHHHHCCCccEEEE-CHHHHhC-----hh
Confidence 63 2221 10000 1 1 1 67788889999 999998 6666542 56
Q ss_pred HHHHHHhccCC
Q 025344 220 IIAKVIGRLGL 230 (254)
Q Consensus 220 ~i~~ii~~l~~ 230 (254)
++.++.+..++
T Consensus 332 ~~~~~~~g~~l 342 (364)
T 1vyr_A 332 LVARLQKKAEL 342 (364)
T ss_dssp HHHHHHHTCCC
T ss_pred HHHHHHcCCCC
Confidence 78888766554
No 402
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=60.79 E-value=12 Score=32.36 Aligned_cols=16 Identities=13% Similarity=0.345 Sum_probs=7.8
Q ss_pred HHHHHHHHHHcCCCEE
Q 025344 103 FKEYVEDCKQVGFDTI 118 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~I 118 (254)
+++.++.|++.|+..|
T Consensus 76 ~d~~v~~a~~~Gi~vi 91 (317)
T 3aof_A 76 VDEVINGALKRGLAVV 91 (317)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHCCCEEE
Confidence 4444555555555444
No 403
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=60.66 E-value=17 Score=37.59 Aligned_cols=73 Identities=25% Similarity=0.331 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc------------CChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLE------------IPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFG 168 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~------------i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~ 168 (254)
.+.+..+.+.+.|+|+|||+-++=. -..+...++|+.+++. + +| +.+|..
T Consensus 649 ~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~---~P-v~vK~~------------- 711 (1025)
T 1gte_A 649 DWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQ---IP-FFAKLT------------- 711 (1025)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCS---SC-EEEEEC-------------
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhC---Cc-eEEEeC-------------
Confidence 4555666777789999999876422 2344556788888774 2 12 455521
Q ss_pred cccccCCCccccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 169 AYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 169 ~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
| +..++.+.++...++||+.|++
T Consensus 712 ----~---------~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 712 ----P---------NVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp ----S---------CSSCHHHHHHHHHHHTCSEEEE
T ss_pred ----C---------ChHHHHHHHHHHHHcCCCEEEE
Confidence 1 1223567778888999999999
No 404
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=60.62 E-value=28 Score=28.71 Aligned_cols=69 Identities=14% Similarity=0.115 Sum_probs=40.5
Q ss_pred hHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 025344 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (254)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (254)
..++++.+....-+|++-+--- - .+.+.+.+.++.+++.++.. +.+ .+ +++++.|.+.|.+.|-+
T Consensus 30 ~~l~~~~~~~~~G~~~v~lr~~--~-~~~~~~~~~~~~l~~~~~~~--~~l---~v-------~~~~~~a~~~gad~v~l 94 (221)
T 1yad_A 30 EELARIIITIQNEVDFIHIRER--S-KSAADILKLLDLIFEGGIDK--RKL---VM-------NGRVDIALFSTIHRVQL 94 (221)
T ss_dssp HHHHHHHHHHGGGCSEEEECCT--T-SCHHHHHHHHHHHHHTTCCG--GGE---EE-------ESCHHHHHTTTCCEEEE
T ss_pred chHHHHHHHHHCCCCEEEEccC--C-CCHHHHHHHHHHHHHhcCcC--CeE---EE-------eChHHHHHHcCCCEEEe
Confidence 4556655554445777765421 1 23344667777777766531 122 11 23567889999999999
Q ss_pred cCCc
Q 025344 121 NVGS 124 (254)
Q Consensus 121 SdGt 124 (254)
....
T Consensus 95 ~~~~ 98 (221)
T 1yad_A 95 PSGS 98 (221)
T ss_dssp CTTS
T ss_pred CCCc
Confidence 7543
No 405
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=60.60 E-value=14 Score=31.95 Aligned_cols=41 Identities=17% Similarity=0.279 Sum_probs=33.7
Q ss_pred HHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceE
Q 025344 188 IRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 234 (254)
Q Consensus 188 i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~kli 234 (254)
++.+++.|++||++|++-+.- --+++++.++++.+|.++++
T Consensus 87 ~e~~~~~l~~GadkVii~t~a------~~~p~li~e~~~~~g~q~iv 127 (243)
T 4gj1_A 87 KEEVKALLDCGVKRVVIGSMA------IKDATLCLEILKEFGSEAIV 127 (243)
T ss_dssp HHHHHHHHHTTCSEEEECTTT------TTCHHHHHHHHHHHCTTTEE
T ss_pred HHHHHHHHHcCCCEEEEcccc------ccCCchHHHHHhcccCceEE
Confidence 788999999999999997652 23578888999888877765
No 406
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=60.60 E-value=40 Score=30.56 Aligned_cols=141 Identities=13% Similarity=0.175 Sum_probs=77.2
Q ss_pred chhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHh-CCceecCCc-HHHHHHHhCCchHHHHHHHHHHcCCC
Q 025344 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ-HDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFD 116 (254)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~-~gV~v~~Gt-l~E~a~~qg~~~~~~yl~~~k~lGF~ 116 (254)
.+....++++..++|++++|.|.--..-+..+.+ +.+++ +|..+..-- +..+ |+-+..|.+.+.++|.|
T Consensus 35 ~~~eal~l~~~l~~~v~~vKVG~~lf~~~G~~~V----~~Lk~~~g~~IflDlKl~DI-----pnTv~~av~~~a~lGaD 105 (303)
T 3ru6_A 35 TKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFI----EELKKVDDFKIFLDLKFHDI-----PNTMADACEEVSKLGVD 105 (303)
T ss_dssp SHHHHHHHHHHTTTSSCEEEECHHHHHHHTHHHH----HHHHHHCCCEEEEEEEECSC-----HHHHHHHHHHHHTTTCS
T ss_pred CHHHHHHHHHHhCCCccEEEeCHHHHHHhCHHHH----HHHHHhhCCCEEEEeeeccC-----chhHHHHHHHHHhcCCC
Confidence 5678899999999999999997322111222223 33333 255544321 2111 23456677788999999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHcCCcccce-eeeecCCCCCCCccccccccccccCCCccccccCH-HHHHHHHHHH
Q 025344 117 TIELNVGSLEIPEETLLRYVRLVKSAGLKAKPK-FAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDV-DLLIRRAERC 194 (254)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E-~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~-~~~i~~~~~d 194 (254)
+|-|.- ....+....+++.+++.|=. |. ++|-- .+..+ .+| +.. +. ..++ +..++.++..
T Consensus 106 ~vTVHa---~~G~~~m~aa~e~a~~~~~~--~~llaVtv-LTS~s-~~~--l~~-l~--------~~~~~e~V~~lA~~a 167 (303)
T 3ru6_A 106 MINIHA---SAGKIAIQEVMTRLSKFSKR--PLVLAVSA-LTSFD-EEN--FFS-IY--------RQKIEEAVINFSKIS 167 (303)
T ss_dssp EEEEEG---GGCHHHHHHHHHHHTTSSSC--CEEEEECS-CTTCC-HHH--HHH-HH--------SSCHHHHHHHHHHHH
T ss_pred EEEEec---cCCHHHHHHHHHHHHhcCCC--ceEEEEEE-ecCCC-HHH--HHH-HH--------cCCHHHHHHHHHHHH
Confidence 999854 33455555666666554311 11 22210 11111 011 000 00 0123 4456677778
Q ss_pred HHcCCcEEEEec
Q 025344 195 LEAGADMIMIDS 206 (254)
Q Consensus 195 LeAGA~~ViiEa 206 (254)
.++|.+-|+.=+
T Consensus 168 ~~~G~dGvV~s~ 179 (303)
T 3ru6_A 168 YENGLDGMVCSV 179 (303)
T ss_dssp HHTTCSEEECCT
T ss_pred HHcCCCEEEECH
Confidence 899999988855
No 407
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=60.57 E-value=9.4 Score=37.29 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=38.4
Q ss_pred HHHHHHHHHHcCCCEEEecC---------------Ccc---------cCC---------hhHHHHHHHHHHHcCCcccce
Q 025344 103 FKEYVEDCKQVGFDTIELNV---------------GSL---------EIP---------EETLLRYVRLVKSAGLKAKPK 149 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd---------------Gti---------~i~---------~~~r~~lI~~~~~~G~~v~~E 149 (254)
+.+-++++|+|||++|+++- |.- ... .++..++|+.+.++|++|+-.
T Consensus 122 ~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~g~~~~gY~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~Gi~VilD 201 (637)
T 1gjw_A 122 MMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILD 201 (637)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCeecccccccCCCCCccCCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHCCCEEEEE
Confidence 45668899999999999872 221 111 489999999999999999877
Q ss_pred eee
Q 025344 150 FAV 152 (254)
Q Consensus 150 ~g~ 152 (254)
+-.
T Consensus 202 ~V~ 204 (637)
T 1gjw_A 202 FIP 204 (637)
T ss_dssp ECT
T ss_pred ECc
Confidence 643
No 408
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=60.52 E-value=9.2 Score=38.31 Aligned_cols=47 Identities=19% Similarity=0.271 Sum_probs=32.7
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---------ccCChhHHHHHHHHHHHcCCccc
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGS---------LEIPEETLLRYVRLVKSAGLKAK 147 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---------i~i~~~~r~~lI~~~~~~G~~v~ 147 (254)
+..++|++.|.++||++|=|.+|= ...|..+-.+|++.+++.|.++.
T Consensus 309 ~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~i~ 364 (641)
T 3a24_A 309 PTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGII 364 (641)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCEEE
Confidence 357888888888888888887762 22344556688888888776543
No 409
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=60.51 E-value=14 Score=33.58 Aligned_cols=49 Identities=14% Similarity=0.165 Sum_probs=23.5
Q ss_pred HHHHHHHHHcCCCEEEecC---Ccc-cCChhHHHHHHHHHHHcCCcccceeee
Q 025344 104 KEYVEDCKQVGFDTIELNV---GSL-EIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISd---Gti-~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
++.++.++++||++|-|.- |.. .=..+...++|+.+.++|++|+-++.-
T Consensus 57 ~~~i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~ 109 (345)
T 3jug_A 57 STAIPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNKMVAVVEVHD 109 (345)
T ss_dssp HHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred HHHHHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3455555566666555531 111 112233345555666666665555543
No 410
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=60.50 E-value=39 Score=28.83 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=0.0
Q ss_pred CChhHHHHHHHHHHhCCce----ecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec---CCcccCChhHHHHHHHHH
Q 025344 67 MPKPFIEEVVKRAHQHDVY----VSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN---VGSLEIPEETLLRYVRLV 139 (254)
Q Consensus 67 ~~~~~l~eKi~l~~~~gV~----v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEIS---dGti~i~~~~r~~lI~~~ 139 (254)
.+.+.+++-++.+++||+. +.|-+-.| .+.++.+.+. ||-.+.=+ .|+-+-....-.++|+++
T Consensus 127 ~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e--------~~~~~~~~~~--g~v~~~s~~G~tG~~~~~~~~~~~~i~~v 196 (262)
T 1rd5_A 127 LPYVAAHSLWSEAKNNNLELVLLTTPAIPED--------RMKEITKASE--GFVYLVSVNGVTGPRANVNPRVESLIQEV 196 (262)
T ss_dssp CBTTTHHHHHHHHHHTTCEECEEECTTSCHH--------HHHHHHHHCC--SCEEEECSSCCBCTTSCBCTHHHHHHHHH
T ss_pred CChhhHHHHHHHHHHcCCceEEEECCCCCHH--------HHHHHHhcCC--CeEEEecCCCCCCCCcCCCchHHHHHHHH
Q ss_pred HHc-CCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 140 KSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 140 ~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
++. .+.+...+|+ .+ .+++...+++|||-|++
T Consensus 197 ~~~~~~pI~vgGGI---~~------------------------------~e~~~~~~~~GAdgvvV 229 (262)
T 1rd5_A 197 KKVTNKPVAVGFGI---SK------------------------------PEHVKQIAQWGADGVII 229 (262)
T ss_dssp HHHCSSCEEEESCC---CS------------------------------HHHHHHHHHTTCSEEEE
T ss_pred HhhcCCeEEEECCc---CC------------------------------HHHHHHHHHcCCCEEEE
No 411
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=60.41 E-value=21 Score=32.74 Aligned_cols=90 Identities=13% Similarity=0.167 Sum_probs=54.7
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccccc
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~ 182 (254)
+.++.+.+.+.|.++|++|.++.+-....-.++++.+++. +. +|=++. | . +
T Consensus 252 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~-~~-iPvi~~-------G--------g-i----------- 302 (365)
T 2gou_A 252 YTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREA-YQ-GVLIYA-------G--------R-Y----------- 302 (365)
T ss_dssp HHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-CC-SEEEEE-------S--------S-C-----------
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHH-CC-CcEEEe-------C--------C-C-----------
Confidence 4456777788899999999986421111112566666663 10 111111 1 1 1
Q ss_pred CHHHHHHHHHHHHHcC-CcEEEEecccccccCCCccHHHHHHHHhccCCC
Q 025344 183 DVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 231 (254)
Q Consensus 183 d~~~~i~~~~~dLeAG-A~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~ 231 (254)
+ .+.+++.|++| ||.|++ +|+++.+ ++++.++.+..++.
T Consensus 303 ~----~~~a~~~l~~g~aD~V~i-gR~~i~~-----P~l~~~~~~g~~l~ 342 (365)
T 2gou_A 303 N----AEKAEQAINDGLADMIGF-GRPFIAN-----PDLPERLRHGYPLA 342 (365)
T ss_dssp C----HHHHHHHHHTTSCSEEEC-CHHHHHC-----TTHHHHHHHTCCCC
T ss_pred C----HHHHHHHHHCCCcceehh-cHHHHhC-----chHHHHHHcCCCCC
Confidence 2 56778889999 999988 6665532 56788887765543
No 412
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=60.38 E-value=8.5 Score=39.73 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCCEEEecC----Cc------------------------ccCC------hhHHHHHHHHHHHcCCccccee
Q 025344 105 EYVEDCKQVGFDTIELNV----GS------------------------LEIP------EETLLRYVRLVKSAGLKAKPKF 150 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISd----Gt------------------------i~i~------~~~r~~lI~~~~~~G~~v~~E~ 150 (254)
+-|.++|+|||++||++= .+ ..++ .++..++|+.+.++|++|+-.+
T Consensus 473 ~~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~dy~ap~~~y~~dp~Gt~~~~dfk~LV~~aH~~GI~VILDv 552 (921)
T 2wan_A 473 TGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQRIGVNMDV 552 (921)
T ss_dssp CHHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCCcCCCCCCcccccCCCCCccHHHHHHHHHHHHHcCCEEEEEE
Confidence 447888999999999871 11 1222 4899999999999999998776
Q ss_pred ee
Q 025344 151 AV 152 (254)
Q Consensus 151 g~ 152 (254)
-.
T Consensus 553 V~ 554 (921)
T 2wan_A 553 VY 554 (921)
T ss_dssp CT
T ss_pred cc
Confidence 55
No 413
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=60.33 E-value=20 Score=31.25 Aligned_cols=81 Identities=17% Similarity=0.168 Sum_probs=51.5
Q ss_pred chHHHHHHHHHHcCCCEEEecC-CcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCc
Q 025344 101 SAFKEYVEDCKQVGFDTIELNV-GSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISd-Gti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~ 177 (254)
+.+..|...++-+||..|=+.. |+.. -.++|+++++. ...+.-.+|++
T Consensus 140 e~~~~~a~~a~~~g~~~VYld~sG~~~-----~~~~i~~i~~~~~~~Pv~vGGGI~------------------------ 190 (228)
T 3vzx_A 140 DDIVAYARVSELLQLPIFYLEYSGVLG-----DIEAVKKTKAVLETSTLFYGGGIK------------------------ 190 (228)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECTTSCC-----CHHHHHHHHHHCSSSEEEEESSCC------------------------
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCcC-----CHHHHHHHHHhcCCCCEEEeCCCC------------------------
Confidence 3567888888888888876643 4321 25778887775 35666677763
Q ss_pred cccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHh
Q 025344 178 TEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 226 (254)
Q Consensus 178 ~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~ 226 (254)
| .+++++.+ +|||.|+|=+- +++ +.+.+.++++
T Consensus 191 -----t----~e~a~~~~-~gAD~VVVGSa-~v~-----~p~~~~~~v~ 223 (228)
T 3vzx_A 191 -----D----AETAKQYA-EHADVIVVGNA-VYE-----DFDRALKTVA 223 (228)
T ss_dssp -----S----HHHHHHHH-TTCSEEEECTH-HHH-----CHHHHHHHHH
T ss_pred -----C----HHHHHHHH-hCCCEEEEChH-Hhc-----CHHHHHHHHH
Confidence 1 45566656 79999999553 222 2455555554
No 414
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=60.09 E-value=30 Score=32.05 Aligned_cols=171 Identities=15% Similarity=0.107 Sum_probs=97.7
Q ss_pred chhHHHHHHHhhccc--ccEEeecCcccccCC-----------hhHHHHHHHHHHhCCceecC----Cc------HHHHH
Q 025344 39 SHNVLEDIFESMGQF--VDGLKFSGGSHSLMP-----------KPFIEEVVKRAHQHDVYVST----GD------WAEHL 95 (254)
Q Consensus 39 g~~~~~DlLe~ag~y--ID~lKfg~GT~~l~~-----------~~~l~eKi~l~~~~gV~v~~----Gt------l~E~a 95 (254)
++..++.+|+.|-+- ==+|-++-|+...+. .....--..++++++|+|.. |. |++-+
T Consensus 30 n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~~g~~~~~~v~g~~~~a~~v~~~A~~~~VPVaLHlDHg~~~~ld~~~~~~ 109 (349)
T 3elf_A 30 SSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFTHVIAAKYPVNVALHTDHCPKDKLDSYVRPL 109 (349)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHTTSSSCEEEEECCCCGGGGGGTHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhHHhhcCcchhhhhhhhHHHHHHHHHHHHHHCCCCEEEECCCCCCcccchhhhhh
Confidence 456666677655432 013444444433221 11233345678899999985 42 33333
Q ss_pred HHhCCchHHHHHHHHHHcCCCEEEecCCcccCChh--HHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccc---ccc
Q 025344 96 IRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF---GAY 170 (254)
Q Consensus 96 ~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~---~~~ 170 (254)
+. ...++++.|-+.||+.|=|.-...++.+- .=.++++++...|.-|--|+|.=-+. +++..- +..
T Consensus 110 l~----~~~~~i~~~i~~GFtSVMiDgS~lp~eENi~~Tk~vv~~ah~~gvsVEaElG~iGG~-----Edgv~~~~~~~~ 180 (349)
T 3elf_A 110 LA----ISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKIILEIEIGVVGGE-----EDGVANEINEKL 180 (349)
T ss_dssp HH----HHHHHHHTTCCCSCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCBC------------------
T ss_pred HH----HHHHHHHHHhhcCCCEEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeccccc-----cCCccccccccc
Confidence 32 23566777778899999996665544332 22377888999999999999983211 111100 011
Q ss_pred cccCCCccccccCHHHHHHHHHHH--HHcCCcEEEEe---cccccc-cCCCccHHHHHHHHhcc
Q 025344 171 VARAPRSTEYVEDVDLLIRRAERC--LEAGADMIMID---SDDVCK-HADSLRADIIAKVIGRL 228 (254)
Q Consensus 171 ~~~~~~~~~~~~d~~~~i~~~~~d--LeAGA~~ViiE---argi~d-~~g~~r~d~i~~ii~~l 228 (254)
+| ||++..+.+++- ...|.|.+=+= +-|.|. .+=.++.+.+.+|-+.+
T Consensus 181 yT----------~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v 234 (349)
T 3elf_A 181 YT----------SPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVA 234 (349)
T ss_dssp CC----------CHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHH
T ss_pred CC----------CHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHH
Confidence 22 677766666542 12347766552 238997 35678899998887644
No 415
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=60.08 E-value=5.9 Score=38.69 Aligned_cols=39 Identities=21% Similarity=0.251 Sum_probs=25.9
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccC---------ChhHHHHHHHHHHH
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSLEI---------PEETLLRYVRLVKS 141 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i---------~~~~r~~lI~~~~~ 141 (254)
..++.+.+.+.|.++|++|.|+.+- +.....++++.+++
T Consensus 230 ~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 277 (671)
T 1ps9_A 230 TVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKG 277 (671)
T ss_dssp HHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHH
Confidence 4456677788899999999776431 22233566666666
No 416
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=60.02 E-value=33 Score=28.12 Aligned_cols=89 Identities=12% Similarity=0.107 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc----ccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS----LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt----i~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~ 176 (254)
...+.++.+.++|.+.|=+.+-+ ..=+. .++++.+++. ...+....|+
T Consensus 155 ~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~---~~~i~~l~~~~~~pvia~GGi------------------------ 207 (253)
T 1h5y_A 155 DAVKWAKEVEELGAGEILLTSIDRDGTGLGYD---VELIRRVADSVRIPVIASGGA------------------------ 207 (253)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTTCSCCC---HHHHHHHHHHCSSCEEEESCC------------------------
T ss_pred CHHHHHHHHHhCCCCEEEEecccCCCCcCcCC---HHHHHHHHHhcCCCEEEeCCC------------------------
Confidence 35566788889999998874311 11111 2445555542 2223332222
Q ss_pred ccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 177 ~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
.+ .+.+.+.+++||+-|++ ++.++.+... ...+.+.+++.|
T Consensus 208 -----~~----~~~~~~~~~~Ga~~v~v-gsal~~~~~~--~~~~~~~l~~~g 248 (253)
T 1h5y_A 208 -----GR----VEHFYEAAAAGADAVLA-ASLFHFRVLS--IAQVKRYLKERG 248 (253)
T ss_dssp -----CS----HHHHHHHHHTTCSEEEE-SHHHHTTSSC--HHHHHHHHHHTT
T ss_pred -----CC----HHHHHHHHHcCCcHHHH-HHHHHcCCCC--HHHHHHHHHHcC
Confidence 12 24455567899999998 4567665422 333444444444
No 417
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=59.98 E-value=48 Score=27.65 Aligned_cols=139 Identities=12% Similarity=0.140 Sum_probs=72.9
Q ss_pred CceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHh----CCceec--CC-------cH
Q 025344 25 GVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ----HDVYVS--TG-------DW 91 (254)
Q Consensus 25 GlT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~----~gV~v~--~G-------tl 91 (254)
++..+..=|+ . .+...+.+++. | .|.+ ..|+.++.+++.+.+.++.+.. .++.+. .| +|
T Consensus 74 ~ipvi~~ggI--~-~~~~~~~~~~~-G--ad~V--~lg~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~ 145 (253)
T 1thf_D 74 DIPFTVGGGI--H-DFETASELILR-G--ADKV--SINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSG 145 (253)
T ss_dssp CSCEEEESSC--C-SHHHHHHHHHT-T--CSEE--EESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTT
T ss_pred CCCEEEeCCC--C-CHHHHHHHHHc-C--CCEE--EEChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCC
Confidence 5555555444 2 34555666653 3 5554 5566667666667776666532 122222 12 12
Q ss_pred HHHHHHhCCchHHHHHHHHHHcCCCEEEecC----CcccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccc
Q 025344 92 AEHLIRNGPSAFKEYVEDCKQVGFDTIELNV----GSLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRA 166 (254)
Q Consensus 92 ~E~a~~qg~~~~~~yl~~~k~lGF~~IEISd----Gti~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~ 166 (254)
.|. . .....+.++.+.++|++.|=+++ |+..=+ + .++++++++. ...++.+-|+
T Consensus 146 ~~~--~--~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~--~-~~~~~~l~~~~~ipvia~GGI-------------- 204 (253)
T 1thf_D 146 KKN--T--GILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY--D-TEMIRFVRPLTTLPIIASGGA-------------- 204 (253)
T ss_dssp TEE--E--EEEHHHHHHHHHHTTCSEEEEEETTTTTSCSCC--C-HHHHHHHGGGCCSCEEEESCC--------------
T ss_pred ccc--c--CCCHHHHHHHHHHCCCCEEEEEeccCCCCCCCC--C-HHHHHHHHHhcCCCEEEECCC--------------
Confidence 220 0 01356777778888998887753 222111 1 3455555542 3333433333
Q ss_pred cccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEeccccccc
Q 025344 167 FGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKH 212 (254)
Q Consensus 167 ~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~ 212 (254)
.+ .+.+.+.+++||+-|++ ++.++.+
T Consensus 205 ---------------~~----~~d~~~~~~~Gadgv~v-Gsal~~~ 230 (253)
T 1thf_D 205 ---------------GK----MEHFLEAFLAGADAALA-ASVFHFR 230 (253)
T ss_dssp ---------------CS----HHHHHHHHHTTCSEEEE-SHHHHTT
T ss_pred ---------------CC----HHHHHHHHHcCChHHHH-HHHHHcC
Confidence 12 34445556799999987 5667754
No 418
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=59.98 E-value=33 Score=29.94 Aligned_cols=50 Identities=8% Similarity=-0.008 Sum_probs=38.4
Q ss_pred HHHHHHHHHHcCCCEEEecCCc--ccCChhHHHHHHHHHHHcCCcccceeee
Q 025344 103 FKEYVEDCKQVGFDTIELNVGS--LEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGt--i~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
..+.+++|.++||..|.|.... ..++.+....+.+.+.+.|+-|.-..+.
T Consensus 129 a~~el~~~~~~g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 129 ACKEASRAVAAGHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp HHHHHHHHHHHTCCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHHHHcCCeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 3455677778999999987543 3567788889999999999988776654
No 419
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=59.94 E-value=4.1 Score=35.99 Aligned_cols=91 Identities=10% Similarity=0.145 Sum_probs=59.6
Q ss_pred ceeEecCCCCCCcc-hhHHHHHHHhhcccccEEeecCcccccCChh---HHHHHHHHHHhCCceecCC-cHHHHHHHhCC
Q 025344 26 VTEMRSPHYTLSSS-HNVLEDIFESMGQFVDGLKFSGGSHSLMPKP---FIEEVVKRAHQHDVYVSTG-DWAEHLIRNGP 100 (254)
Q Consensus 26 lT~V~DkG~~~~~g-~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~---~l~eKi~l~~~~gV~v~~G-tl~E~a~~qg~ 100 (254)
|-.=+||....++. ......+++..++|++++|.|..-..-+..+ .|++.++.++ .|..|..- =+..+ |
T Consensus 16 LcVgLD~~~~~~~~~~~~~~~lv~~l~~~v~~~Kvg~~lf~~~G~~g~~~l~~l~~~~~-~g~~VflDlK~~DI-----~ 89 (255)
T 3qw3_A 16 LCVGLDPRAKTAAAAVEECKRLIEQTHEYAAAYKPNAAFFEFFGAEGWAALSEVIRAVP-AGIPVVLDAKRGDI-----A 89 (255)
T ss_dssp EEEEECCCCSSHHHHHHHHHHHHHHHGGGCSEEEEBHHHHHTTTHHHHHHHHHHHHHSC-TTCCBEEEEEECCC-----H
T ss_pred EEEEeCCCchhcchHHHHHHHHHHHhCCcCcEEEEcHHHHHhcCHHHHHHHHHHHHHhc-CCCeEEEEeecCCc-----H
Confidence 55667877543212 3678999999999999999998776666654 5666666543 56665542 12111 2
Q ss_pred chHHHHHHHH-HHcCCCEEEecC
Q 025344 101 SAFKEYVEDC-KQVGFDTIELNV 122 (254)
Q Consensus 101 ~~~~~yl~~~-k~lGF~~IEISd 122 (254)
+-+..|.+.+ +++|+|+|-|+-
T Consensus 90 nTv~~~a~~~~~~lg~d~vTvh~ 112 (255)
T 3qw3_A 90 DTADAYATSAFKHLNAHAITASP 112 (255)
T ss_dssp HHHHHHHHHHHTTSCCSEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcc
Confidence 2455666666 479999998864
No 420
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=59.65 E-value=6.7 Score=31.83 Aligned_cols=65 Identities=26% Similarity=0.221 Sum_probs=52.2
Q ss_pred HHHHhCCc-eecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 025344 77 KRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 77 ~l~~~~gV-~v~~-Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (254)
+.++++|| .+.- |-..++|+.+- ..+ +.++||+.+=++|.+-+.+.+.....++.++..|-.+.+
T Consensus 113 ~~L~~~gi~~lvi~G~~t~~CV~~T--a~d-----a~~~Gy~v~vv~Da~~~~~~~~h~~al~~m~~~g~~v~~ 179 (180)
T 1im5_A 113 KILRGNGVKRVYICGVATEYCVRAT--ALD-----ALKHGFEVYLLRDAVKGIKPEDEERALEEMKSRGIKIVQ 179 (180)
T ss_dssp HHHHHTTCCEEEEEEECTTTHHHHH--HHH-----HHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEEC
T ss_pred HHHHhCCCCEEEEEEeecCHHHHHH--HHH-----HHHCCCEEEEehhhccCCCHHHHHHHHHHHHHcCCEEEe
Confidence 45678899 4554 77889998885 333 557899999999999999999999999999998766543
No 421
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=59.58 E-value=12 Score=37.62 Aligned_cols=53 Identities=19% Similarity=0.261 Sum_probs=42.7
Q ss_pred CchHHHHHHHHHHcCCCEEEe---------cCCcccCCh-hHHHHHHHHHHHcCCcccceeee
Q 025344 100 PSAFKEYVEDCKQVGFDTIEL---------NVGSLEIPE-ETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEI---------SdGti~i~~-~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
++..++-++.+|++||++|++ ..|..+.+- .+..++|+.|+++|+.|+-..|-
T Consensus 39 ~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr~GP 101 (654)
T 3thd_A 39 RFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPGP 101 (654)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEEeccCC
Confidence 457888899999999999988 566666653 44789999999999999876643
No 422
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=59.58 E-value=7.5 Score=36.05 Aligned_cols=73 Identities=10% Similarity=0.037 Sum_probs=53.7
Q ss_pred HHHHHhhcccccEEeecCcccccCCh---hHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHH-HHcCCCEE
Q 025344 44 EDIFESMGQFVDGLKFSGGSHSLMPK---PFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDC-KQVGFDTI 118 (254)
Q Consensus 44 ~DlLe~ag~yID~lKfg~GT~~l~~~---~~l~eKi~l~~~~gV~v~~G-tl~E~a~~qg~~~~~~yl~~~-k~lGF~~I 118 (254)
..+++..++||+++|.|..-..-+.. +.|++.++.++++|..|..- =+..+ |+-+..|.+.+ ..+|.|+|
T Consensus 107 ~~lvd~l~~~v~~vKvG~~lf~~~G~~gv~~l~~l~~~l~~~g~~VflDlK~~DI-----pnTv~~ya~~~~~~lgaD~v 181 (342)
T 3n3m_A 107 FYIINETNKYALTFKMNFAFYIPYGSVGIDVLKNVFDYLYELNIPTILDMKINDI-----GNTVKNYRKFIFEYLKSDSC 181 (342)
T ss_dssp HHHHHHHGGGCSEEEEEGGGTSTTTHHHHHHHHHHHHHHHHHTCCEEEEEEECCC-----HHHHHHHHHHHHTTSCCSEE
T ss_pred HHHHHHhcCcCcEEEecHHHHHhcCHHHHHHHHHHHHHHHhCCCeEEEEeecCCc-----HHHHHHHHHHHHHhcCCCEE
Confidence 37999999999999999877666654 34777788899888877653 23222 22455666665 67999999
Q ss_pred Eec
Q 025344 119 ELN 121 (254)
Q Consensus 119 EIS 121 (254)
-|+
T Consensus 182 TVh 184 (342)
T 3n3m_A 182 TVN 184 (342)
T ss_dssp EEC
T ss_pred EEc
Confidence 996
No 423
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=59.17 E-value=9.6 Score=32.10 Aligned_cols=22 Identities=27% Similarity=0.161 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCC
Q 025344 102 AFKEYVEDCKQVGFDTIELNVG 123 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG 123 (254)
..-++.+.+.+.|.+.|+++|-
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~ 52 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDL 52 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEH
T ss_pred CHHHHHHHHHHcCCCEEEEecc
Confidence 4667778888899999999873
No 424
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=59.01 E-value=45 Score=29.95 Aligned_cols=75 Identities=20% Similarity=0.366 Sum_probs=49.6
Q ss_pred HHHcCCCEEEecCC----------cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccc
Q 025344 110 CKQVGFDTIELNVG----------SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (254)
Q Consensus 110 ~k~lGF~~IEISdG----------ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~ 179 (254)
+.+.||++|=+.|. +..++.++-+...+.+.+. -. .+=+-. ++| |+.|
T Consensus 33 ~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~-~~-~~~vva-----D~p------fgsy--------- 90 (275)
T 1o66_A 33 MDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARG-AK-NAMIVS-----DLP------FGAY--------- 90 (275)
T ss_dssp HHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHH-CS-SSEEEE-----ECC------TTSS---------
T ss_pred HHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhh-CC-CCeEEE-----ECC------CCCc---------
Confidence 45689999965432 4578888888888877762 00 010111 121 1222
Q ss_pred cccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 180 YVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 180 ~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
..++++.++.+.+.+++||+.|-+|+-
T Consensus 91 -~~s~~~a~~na~rl~kaGa~aVklEdg 117 (275)
T 1o66_A 91 -QQSKEQAFAAAAELMAAGAHMVKLEGG 117 (275)
T ss_dssp -SSCHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred -cCCHHHHHHHHHHHHHcCCcEEEECCc
Confidence 125899999999999999999999984
No 425
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=58.77 E-value=39 Score=31.01 Aligned_cols=66 Identities=17% Similarity=0.087 Sum_probs=43.8
Q ss_pred HcCCCEEEecCCccc------C--ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccC
Q 025344 112 QVGFDTIELNVGSLE------I--PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVED 183 (254)
Q Consensus 112 ~lGF~~IEISdGti~------i--~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d 183 (254)
+.|+|+|||+-++=. + +.+...++++.+++.- -+| +.+|- +|. | |
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~--~~P-V~vKi-----------------~p~-~------d 205 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY--PHS-FGVKM-----------------PPY-F------D 205 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC--CSC-EEEEE-----------------CCC-C------S
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh--CCC-eEEEe-----------------cCC-C------C
Confidence 468999999987422 2 4567778888888741 122 55552 221 2 4
Q ss_pred HHHHHHHHHHHHHcC-CcEEEE
Q 025344 184 VDLLIRRAERCLEAG-ADMIMI 204 (254)
Q Consensus 184 ~~~~i~~~~~dLeAG-A~~Vii 204 (254)
.+++.+.++...++| |+.|++
T Consensus 206 ~~~~~~~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 206 FAHFDAAAEILNEFPKVQFITC 227 (354)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHHHHHhCCCccEEEE
Confidence 666777777778998 999984
No 426
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=58.76 E-value=10 Score=33.35 Aligned_cols=51 Identities=16% Similarity=0.268 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccC----------------------ChhHHHHHHHHHHHcCCcccceeee
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEI----------------------PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i----------------------~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
.+++.++.++++||++|-|.-..-.+ ..+...++|+.++++|++|+-++.-
T Consensus 45 ~~~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~ 117 (358)
T 1ece_A 45 DYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHR 117 (358)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred hHHHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCC
Confidence 47899999999999999887331111 1233467899999999999998885
No 427
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=58.71 E-value=10 Score=30.92 Aligned_cols=37 Identities=27% Similarity=0.218 Sum_probs=21.1
Q ss_pred HHHHHHHHHHc--CCCEEEecCCcccCChhHHHHHHHHHHHc
Q 025344 103 FKEYVEDCKQV--GFDTIELNVGSLEIPEETLLRYVRLVKSA 142 (254)
Q Consensus 103 ~~~yl~~~k~l--GF~~IEISdGti~i~~~~r~~lI~~~~~~ 142 (254)
+++.++.++++ |.++|||.+++. ...=..+|+.+++.
T Consensus 12 ~~~~~~~~~~~~~~v~~iev~~~~~---~~~g~~~i~~l~~~ 50 (207)
T 3ajx_A 12 TEAALELAGKVAEYVDIIELGTPLI---KAEGLSVITAVKKA 50 (207)
T ss_dssp HHHHHHHHHHHGGGCSEEEECHHHH---HHHCTHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCEEEECcHHH---HhhCHHHHHHHHHh
Confidence 44444444433 669999977642 22223567777765
No 428
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=58.48 E-value=12 Score=31.72 Aligned_cols=40 Identities=15% Similarity=0.237 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-CChhHHHHHHHHHHH
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLE-IPEETLLRYVRLVKS 141 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~-i~~~~r~~lI~~~~~ 141 (254)
...++.+.+.+.|.+.|+++|-.-+ .....-.++|+++++
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~ 71 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRP 71 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGG
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHH
Confidence 4677888889999999999874321 111112466776665
No 429
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=58.45 E-value=56 Score=28.25 Aligned_cols=105 Identities=12% Similarity=0.052 Sum_probs=62.9
Q ss_pred HHHHHHHhhccc-ccEEeecCc-----c-cccCCh----hHHHHHHHHHHhCCceecC-C-cH-H--------HHHHHhC
Q 025344 42 VLEDIFESMGQF-VDGLKFSGG-----S-HSLMPK----PFIEEVVKRAHQHDVYVST-G-DW-A--------EHLIRNG 99 (254)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~G-----T-~~l~~~----~~l~eKi~l~~~~gV~v~~-G-tl-~--------E~a~~qg 99 (254)
.+++.|+.+.+. .|.+=|... . .-..|. +.+++.-++++++|+.+.. . .+ + |.. .
T Consensus 37 ~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~-~-- 113 (305)
T 3obe_A 37 DMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKF-D-- 113 (305)
T ss_dssp THHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHH-H--
T ss_pred CHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeeccccccccchhhHHHH-H--
Confidence 356666666554 566666532 0 111121 2478888999999997653 2 22 1 222 1
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHH-------HHHHHHHHHcCCccccee
Q 025344 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETL-------LRYVRLVKSAGLKAKPKF 150 (254)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r-------~~lI~~~~~~G~~v~~E~ 150 (254)
+.+++.++.|+.||.+.|=+.-..-..+.+.+ .++.+.++++|.++.-|-
T Consensus 114 -~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 170 (305)
T 3obe_A 114 -EFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHN 170 (305)
T ss_dssp -HHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred -HHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 26899999999999999998532222334444 345566778888866553
No 430
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=58.39 E-value=13 Score=36.39 Aligned_cols=50 Identities=14% Similarity=0.207 Sum_probs=37.2
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------Ccc-----c---------C-----ChhHHHHHHHHHHHcCCcccceeee
Q 025344 103 FKEYVEDCKQVGFDTIELNV-----------GSL-----E---------I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd-----------Gti-----~---------i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
+.+-++++++|||++|.++= |.- + + +.++..++|+.+.++|++|+-.+-.
T Consensus 152 i~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 231 (599)
T 3bc9_A 152 LAERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFDAVL 231 (599)
T ss_dssp HHHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 33446788999999999972 210 0 2 3578999999999999998876544
No 431
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=58.31 E-value=91 Score=26.92 Aligned_cols=167 Identities=13% Similarity=0.078 Sum_probs=92.3
Q ss_pred CCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCCh--------hHHHHHHHHHHhCCc-eecCC--c
Q 025344 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPK--------PFIEEVVKRAHQHDV-YVSTG--D 90 (254)
Q Consensus 22 R~~GlT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~--------~~l~eKi~l~~~~gV-~v~~G--t 90 (254)
+..|++.++..|. .+...+.+++.+..|=++ -.+.|-+.-... +.+++..+++.+++- .+.-| |
T Consensus 37 ~~~GV~~~v~~~~----~~~~~~~~~~la~~~~~v-~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiG 111 (301)
T 2xio_A 37 VEIGVKKFMITGG----NLQDSKDALHLAQTNGMF-FSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECG 111 (301)
T ss_dssp HHHTEEEEEECCC----SHHHHHHHHHHHTTCTTE-EEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEE
T ss_pred HHCCCCEEEEeCC----CHHHHHHHHHHHHHCCCE-EEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCCeEEEEEee
Confidence 3569999999986 456788888888887653 345553332221 225555566665421 11112 1
Q ss_pred ----HH--H-HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcc
Q 025344 91 ----WA--E-HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDR 163 (254)
Q Consensus 91 ----l~--E-~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~ 163 (254)
+. . ...++. .|...++.|+++|...+==+.. ..+ ++++.+++.+.. +..++-..
T Consensus 112 Ld~~~~~~~~~~~Q~~--~f~~ql~lA~~~~lPv~iH~r~----a~~---~~~~il~~~~~~--~~~~i~H~-------- 172 (301)
T 2xio_A 112 LDFDRLQFCPKDTQLK--YFEKQFELSEQTKLPMFLHCRN----SHA---EFLDITKRNRDR--CVGGVVHS-------- 172 (301)
T ss_dssp EETTCTTTSCHHHHHH--HHHHTHHHHHHHCCCEEEEEES----CHH---HHHHHHHHTGGG--SSCEEETT--------
T ss_pred CCCCcCCCCCHHHHHH--HHHHHHHHHHHhCCcEEEEecC----chH---HHHHHHHhccCC--CCcEEEEc--------
Confidence 11 1 122333 7889999999999887633321 233 344445553221 11123111
Q ss_pred ccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccCCCceEEecCCc
Q 025344 164 DRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (254)
Q Consensus 164 d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~~~klifEAP~k 240 (254)
++ -+ .+.+++.++.|.+.=+ .|.+ .+.....++++.+|++||++|..-|
T Consensus 173 -------f~---------g~----~~~~~~~l~~g~yi~~---~g~~-----~~~~~~~~~~~~~p~drlLleTD~P 221 (301)
T 2xio_A 173 -------FD---------GT----KEAAAALIDLDLYIGF---NGCS-----LKTEANLEVLKSIPSEKLMIETDAP 221 (301)
T ss_dssp -------CC---------CC----HHHHHHHHHTTCEEEE---CGGG-----SSSHHHHHHHHTSCGGGEEECCCTT
T ss_pred -------cC---------CC----HHHHHHHHhcCcEEEE---cccc-----cCChHHHHHHHhCChHHEEEecCCC
Confidence 11 01 4566777888875533 2332 1112223788999999999998655
No 432
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=58.19 E-value=24 Score=31.71 Aligned_cols=140 Identities=15% Similarity=0.188 Sum_probs=78.2
Q ss_pred CChhHHHHHHHHHHhCCc-eecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCC
Q 025344 67 MPKPFIEEVVKRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (254)
Q Consensus 67 ~~~~~l~eKi~l~~~~gV-~v~~-Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~ 144 (254)
++.+.+.+.++.+.++|+ .++. |++.|--. ...+.+.+.++.+++.|+.. -+++|++ +.+ .++.+++.|+
T Consensus 99 ~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~-~~~~~l~~ll~~ik~~g~~i-~~t~G~l--~~e----~l~~L~~aGv 170 (369)
T 1r30_A 99 MEVEQVLESARKAKAAGSTRFCMGAAWKNPHE-RDMPYLEQMVQGVKAMGLEA-CMTLGTL--SES----QAQRLANAGL 170 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECCSSCCT-TTHHHHHHHHHHHHHTTSEE-EEECSSC--CHH----HHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCc-CCHHHHHHHHHHHHHcCCeE-EEecCCC--CHH----HHHHHHHCCC
Confidence 455667777887778887 4454 33311100 11236888888999988864 4888874 333 4556677776
Q ss_pred cccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHH-
Q 025344 145 KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAK- 223 (254)
Q Consensus 145 ~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~- 223 (254)
.-++ ++++. +++.=..+. ...+.+++++.++...++|-. +....|+.- |+-.++..+.
T Consensus 171 d~v~-i~les---------~~e~~~~i~-------~~~~~~~~l~~i~~a~~~Gi~---v~~~~I~Gl-~et~ed~~~~l 229 (369)
T 1r30_A 171 DYYN-HNLDT---------SPEFYGNII-------TTRTYQERLDTLEKVRDAGIK---VCSGGIVGL-GETVKDRAGLL 229 (369)
T ss_dssp CEEE-CCCBS---------CHHHHHHHC-------CSSCHHHHHHHHHHHHHHHCE---EECCEEECS-SCCHHHHHHHH
T ss_pred CEEe-ecCcC---------CHHHHHHhC-------CCCCHHHHHHHHHHHHHcCCe---eeeeeEeeC-CCCHHHHHHHH
Confidence 5433 44431 111000011 123689999999999999973 345545544 4433443322
Q ss_pred -HHhccC--CCceEE
Q 025344 224 -VIGRLG--LEKTMF 235 (254)
Q Consensus 224 -ii~~l~--~~klif 235 (254)
.+..++ ++.+-|
T Consensus 230 ~~l~~l~~~~~~i~~ 244 (369)
T 1r30_A 230 LQLANLPTPPESVPI 244 (369)
T ss_dssp HHHHSSSSCCSEEEE
T ss_pred HHHHhhcCCCCEEEe
Confidence 234565 445433
No 433
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=58.17 E-value=11 Score=38.03 Aligned_cols=102 Identities=15% Similarity=0.157 Sum_probs=61.4
Q ss_pred HHHHHHHcCCCEEEec-----C-----Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeeeecCCCCC--CC-c
Q 025344 106 YVEDCKQVGFDTIELN-----V-----GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDI--PS-D 162 (254)
Q Consensus 106 yl~~~k~lGF~~IEIS-----d-----Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v--~~-~ 162 (254)
-+.++++|||++|+++ . |.-. + +.++..++|+.+.++|++|+-.+-..+-..+- +. .
T Consensus 207 ~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~g~~~ 286 (755)
T 3aml_A 207 VLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNG 286 (755)
T ss_dssp THHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCBCCCTTTSGGG
T ss_pred HHHHHHHcCCCEEEECchhcCCCCCCCCCccCCCCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEeccccccccccchhc
Confidence 4778899999999997 1 1111 1 36899999999999999998877654221110 00 0
Q ss_pred cc---cccccccc------cCCCcc-----ccccCHHHHHHHHHHHHH-cCCcEEEEecc
Q 025344 163 RD---RAFGAYVA------RAPRST-----EYVEDVDLLIRRAERCLE-AGADMIMIDSD 207 (254)
Q Consensus 163 ~d---~~~~~~~~------~~~~~~-----~~~~d~~~~i~~~~~dLe-AGA~~ViiEar 207 (254)
-| ..-..++. ...|.. +...-...+++.++..++ .|+|=.-+.+=
T Consensus 287 fd~~~~~~~~yf~~~~~g~~~~w~~~~lN~~~p~V~~~l~~~l~~Wl~e~gvDGfR~Dav 346 (755)
T 3aml_A 287 YDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGV 346 (755)
T ss_dssp GCSSCCGGGSSBCCGGGGEETTTTEECBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTH
T ss_pred cccCCCCCcceeecCCCCccCCCCCceeccCCHHHHHHHHHHHHHHHHHcCCCEEEecch
Confidence 00 00001111 011211 111234678888899998 89999888874
No 434
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=57.75 E-value=10 Score=37.41 Aligned_cols=49 Identities=10% Similarity=0.085 Sum_probs=36.9
Q ss_pred HHHHH--HHHHcCCCEEEecCCcc-------------------------cC-----ChhHHHHHHHHHHHcCCcccceee
Q 025344 104 KEYVE--DCKQVGFDTIELNVGSL-------------------------EI-----PEETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 104 ~~yl~--~~k~lGF~~IEISdGti-------------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g 151 (254)
.+-|+ ++++|||++|.||==+- .+ +.++..++|+.+.++|++|+-.+-
T Consensus 58 ~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 58 INKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp HHHHHTTTTGGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHhcCHHHHHhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 34467 77999999999984111 11 368999999999999999887654
Q ss_pred e
Q 025344 152 V 152 (254)
Q Consensus 152 ~ 152 (254)
.
T Consensus 138 ~ 138 (686)
T 1d3c_A 138 P 138 (686)
T ss_dssp T
T ss_pred c
Confidence 4
No 435
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=57.71 E-value=9 Score=40.12 Aligned_cols=51 Identities=22% Similarity=0.335 Sum_probs=43.9
Q ss_pred chHHHHHHHHHHcCCCEEEe---------cCCcccCC-hhHHHHHHHHHHHcCCcccceee
Q 025344 101 SAFKEYVEDCKQVGFDTIEL---------NVGSLEIP-EETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEI---------SdGti~i~-~~~r~~lI~~~~~~G~~v~~E~g 151 (254)
+..++-++.+|++||++|++ ..|..+.+ ..+..++|+.|+++||.|+-..|
T Consensus 36 ~~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~~a~e~Gl~ViLr~G 96 (971)
T 1tg7_A 36 SLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPG 96 (971)
T ss_dssp GGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHHHHHHHcCCEEEEecC
Confidence 57888899999999999998 67887776 34577999999999999998877
No 436
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=57.70 E-value=4.7 Score=35.09 Aligned_cols=103 Identities=11% Similarity=0.131 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhCCc------eecCC--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhH--HHHHHHHHH
Q 025344 71 FIEEVVKRAHQHDV------YVSTG--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEET--LLRYVRLVK 140 (254)
Q Consensus 71 ~l~eKi~l~~~~gV------~v~~G--tl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~--r~~lI~~~~ 140 (254)
...+.++.++++|| .+.|| |.-|+.- +.++|+|.|-+- |.+. =..+|+.++
T Consensus 94 ~~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~-------------A~~~Gad~vK~F------Pa~~~gG~~~lkal~ 154 (217)
T 3lab_A 94 LTPELIEKAKQVKLDGQWQGVFLPGVATASEVMI-------------AAQAGITQLKCF------PASAIGGAKLLKAWS 154 (217)
T ss_dssp CCHHHHHHHHHHHHHCSCCCEEEEEECSHHHHHH-------------HHHTTCCEEEET------TTTTTTHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCccCCCeEeCCCCCHHHHHH-------------HHHcCCCEEEEC------ccccccCHHHHHHHH
Confidence 34567778888888 88887 6666553 357899999764 3222 146777776
Q ss_pred HcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEeccccccc----CCCc
Q 025344 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKH----ADSL 216 (254)
Q Consensus 141 ~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEargi~d~----~g~~ 216 (254)
. ++|.+-.- .+| + ++ .+.+...|++||..+.. +.-++.. +|+
T Consensus 155 ~----p~p~i~~~----ptG--G-------I~---------------~~N~~~~l~aGa~~~vg-Gs~l~~~~~i~~~~- 200 (217)
T 3lab_A 155 G----PFPDIQFC----PTG--G-------IS---------------KDNYKEYLGLPNVICAG-GSWLTESKLLIEGD- 200 (217)
T ss_dssp T----TCTTCEEE----EBS--S-------CC---------------TTTHHHHHHSTTBCCEE-ESGGGCHHHHHHTC-
T ss_pred h----hhcCceEE----EeC--C-------CC---------------HHHHHHHHHCCCEEEEE-ChhhcChhHHhcCC-
Confidence 6 22322221 111 0 11 34677889999988876 5545543 354
Q ss_pred cHHHHHHHHhc
Q 025344 217 RADIIAKVIGR 227 (254)
Q Consensus 217 r~d~i~~ii~~ 227 (254)
.+.|.+.+++
T Consensus 201 -~~~i~~~a~~ 210 (217)
T 3lab_A 201 -WNEVTRRASE 210 (217)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHHH
Confidence 4556665543
No 437
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=57.46 E-value=12 Score=35.67 Aligned_cols=49 Identities=16% Similarity=0.179 Sum_probs=37.2
Q ss_pred HHHHHHHHcCCCEEEecC---------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeeee
Q 025344 105 EYVEDCKQVGFDTIELNV---------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISd---------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
+=|+++++|||++|.+|- |.-. + +.++..++|+.+.++|++|+-.+-..
T Consensus 35 ~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 102 (555)
T 2ze0_A 35 EKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLVIN 102 (555)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 346788999999999852 2211 1 36889999999999999998766553
No 438
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=57.45 E-value=41 Score=29.95 Aligned_cols=126 Identities=17% Similarity=0.116 Sum_probs=0.0
Q ss_pred EecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhCCceecC------C-cHHHHHHHhCCc
Q 025344 29 MRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST------G-DWAEHLIRNGPS 101 (254)
Q Consensus 29 V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~------G-tl~E~a~~qg~~ 101 (254)
++.|-- +...++.+++.|-+| |+.+-.++|. .++.--+.++..+|.+++ | +..|.-+..
T Consensus 51 lL~p~~----t~~~I~~lc~eA~~~------~~aaVCV~p~-~V~~a~~~L~gs~v~v~tVigFP~G~~~~~~Kv~E--- 116 (260)
T 3r12_A 51 NLKPFA----TPDDIKKLCLEAREN------RFHGVCVNPC-YVKLAREELEGTDVKVVTVVGFPLGANETRTKAHE--- 116 (260)
T ss_dssp ECCTTC----CHHHHHHHHHHHHHT------TCSEEEECGG-GHHHHHHHHTTSCCEEEEEESTTTCCSCHHHHHHH---
T ss_pred cCCCCC----CHHHHHHHHHHHHhc------CCcEEEECHH-HHHHHHHHhcCCCCeEEEEecCCCCCCcHHHHHHH---
Q ss_pred hHHHHHHHHHHcCCCEEE-------ecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccC
Q 025344 102 AFKEYVEDCKQVGFDTIE-------LNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IE-------ISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~ 174 (254)
.+++-+.|-|.|. +-+|..+--.++-..+.+.+...-+||+-|.+. ++
T Consensus 117 -----a~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~------------------Lt-- 171 (260)
T 3r12_A 117 -----AIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCY------------------LD-- 171 (260)
T ss_dssp -----HHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG------------------CC--
T ss_pred -----HHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCC------------------CC--
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCcEE
Q 025344 175 PRSTEYVEDVDLLIRRAERCLEAGADMI 202 (254)
Q Consensus 175 ~~~~~~~~d~~~~i~~~~~dLeAGA~~V 202 (254)
.++++.-.+-..+||||+|
T Consensus 172 ---------~eei~~A~~ia~eaGADfV 190 (260)
T 3r12_A 172 ---------TEEKIAACVISKLAGAHFV 190 (260)
T ss_dssp ---------HHHHHHHHHHHHHTTCSEE
T ss_pred ---------HHHHHHHHHHHHHhCcCEE
No 439
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=57.39 E-value=81 Score=26.07 Aligned_cols=83 Identities=17% Similarity=0.305 Sum_probs=50.4
Q ss_pred hhHHHHHHHHHHhCCcee---cC-CcHH-------HHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC--C-hhHHHH
Q 025344 69 KPFIEEVVKRAHQHDVYV---ST-GDWA-------EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI--P-EETLLR 134 (254)
Q Consensus 69 ~~~l~eKi~l~~~~gV~v---~~-Gtl~-------E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i--~-~~~r~~ 134 (254)
.+.+++.-++++++|+.+ +. +.+. +....+..+.+++.++.|++||.+.|=+.-|...- + .+.+.+
T Consensus 46 ~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~ 125 (285)
T 1qtw_A 46 TQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLAR 125 (285)
T ss_dssp HHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHH
Confidence 356888889999999983 33 2221 11111111268889999999999999887776532 2 233333
Q ss_pred HHHHHH-----HcCCcccceee
Q 025344 135 YVRLVK-----SAGLKAKPKFA 151 (254)
Q Consensus 135 lI~~~~-----~~G~~v~~E~g 151 (254)
+++..+ +.|.++.-|-.
T Consensus 126 ~~~~l~~l~a~~~gv~l~lEn~ 147 (285)
T 1qtw_A 126 IAESINIALDKTQGVTAVIENT 147 (285)
T ss_dssp HHHHHHHHHHHCSSCEEEEECC
T ss_pred HHHHHHHHHhccCCCEEEEecC
Confidence 433332 35666555543
No 440
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=57.25 E-value=55 Score=30.18 Aligned_cols=41 Identities=12% Similarity=0.347 Sum_probs=28.0
Q ss_pred HHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhH
Q 025344 91 WAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEET 131 (254)
Q Consensus 91 l~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~ 131 (254)
||-..+.++++..++.++.+++.||.+|=+--.+-.....+
T Consensus 125 wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~ 165 (352)
T 3sgz_A 125 WFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRR 165 (352)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCH
T ss_pred eeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcch
Confidence 33333333445678999999999999998877665554433
No 441
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=57.16 E-value=14 Score=33.14 Aligned_cols=69 Identities=13% Similarity=0.103 Sum_probs=45.1
Q ss_pred CceecC-C-cH--HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCC-------hhHHHHHHHHHHHcCCcccceee
Q 025344 83 DVYVST-G-DW--AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIP-------EETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 83 gV~v~~-G-tl--~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~-------~~~r~~lI~~~~~~G~~v~~E~g 151 (254)
|=+++. | .+ .+.....+ .-.+++++.+|++||++|-|+-..-.+. .+...++|+.+.++|++|+-++.
T Consensus 64 G~~~~l~Gvn~~~~~~~~~~g-~~~~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vild~H 142 (359)
T 4hty_A 64 GKTIVFRGVNISDPDKIDKDK-RFSKKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELGIYTILDWH 142 (359)
T ss_dssp CCEECCEEEEECCHHHHHHTT-CCSHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEEEecCCcccCCCCC-CcCHHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 445555 5 22 33333344 1247889999999999999974321110 01125789999999999998876
Q ss_pred e
Q 025344 152 V 152 (254)
Q Consensus 152 ~ 152 (254)
-
T Consensus 143 ~ 143 (359)
T 4hty_A 143 S 143 (359)
T ss_dssp C
T ss_pred C
Confidence 5
No 442
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=57.13 E-value=6.3 Score=32.22 Aligned_cols=105 Identities=11% Similarity=0.182 Sum_probs=47.5
Q ss_pred CCCCCcchhHHHHHHHhhcccccEEeecCcccccC--ChhHHHHHHHHHHhCC-ceecC-C-c--HHHHHHHhCCchHHH
Q 025344 33 HYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLM--PKPFIEEVVKRAHQHD-VYVST-G-D--WAEHLIRNGPSAFKE 105 (254)
Q Consensus 33 G~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~--~~~~l~eKi~l~~~~g-V~v~~-G-t--l~E~a~~qg~~~~~~ 105 (254)
|=+++ -+..+.++++.+-++ .+++.+-|.... ..+.+++..+. .+ |.++. | + ..+..-..+.+++-+
T Consensus 78 GEP~l-~~~~l~~l~~~~~~~--~~~i~i~Tng~~~~~~~~~~~l~~~---~~~v~isld~~~~~~~~~~~~~~~~~~~~ 151 (245)
T 3c8f_A 78 GEAIL-QAEFVRDWFRACKKE--GIHTCLDTNGFVRRYDPVIDELLEV---TDLVMLDLKQMNDEIHQNLVGVSNHRTLE 151 (245)
T ss_dssp SCGGG-GHHHHHHHHHHHHTT--TCCEEEEECCCCCCCCHHHHHHHHT---CSEEEEECCCSSHHHHHHHHSSCSHHHHH
T ss_pred CCcCC-CHHHHHHHHHHHHHc--CCcEEEEeCCCcCcCHHHHHHHHHh---CCEEEEeCCCCCHHHhhhccCCCHHHHHH
Confidence 54443 344456777666554 235555443332 33334433332 22 34444 2 2 122211111223455
Q ss_pred HHHHHHHcCCCEEEecCCcc---cCChhHHHHHHHHHHHcCC
Q 025344 106 YVEDCKQVGFDTIELNVGSL---EIPEETLLRYVRLVKSAGL 144 (254)
Q Consensus 106 yl~~~k~lGF~~IEISdGti---~i~~~~r~~lI~~~~~~G~ 144 (254)
-++.+++.|+. |.++--.+ .-+.++..++++.+++.|.
T Consensus 152 ~i~~l~~~g~~-v~i~~~~~~g~~~~~~~~~~~~~~~~~~~~ 192 (245)
T 3c8f_A 152 FAKYLANKNVK-VWIRYVVVPGWSDDDDSAHRLGEFTRDMGN 192 (245)
T ss_dssp HHHHHHHHTCC-EEEEEEECTTTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhcCCE-EEEEEeecCCCCCCHHHHHHHHHHHHhcCC
Confidence 55666677774 22221111 1123666677777777763
No 443
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=57.11 E-value=34 Score=29.31 Aligned_cols=12 Identities=8% Similarity=0.163 Sum_probs=6.2
Q ss_pred HHHHHHHHHhCC
Q 025344 72 IEEVVKRAHQHD 83 (254)
Q Consensus 72 l~eKi~l~~~~g 83 (254)
+.+-++++.+.+
T Consensus 26 l~~~~~~~~~~~ 37 (245)
T 1eix_A 26 RDDALAFVDKID 37 (245)
T ss_dssp HHHHHHHHTTSC
T ss_pred HHHHHHHHHHhC
Confidence 455555555544
No 444
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=57.06 E-value=29 Score=30.47 Aligned_cols=104 Identities=17% Similarity=0.282 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
.++++.++++++||.+|=|+-+.+..-.+ ..+..+.++-+=+| ||...
T Consensus 44 ~i~~lc~eA~~~~~~aVcV~p~~v~~a~~-------~L~~s~v~v~tVig--FP~G~----------------------- 91 (239)
T 3ngj_A 44 QIRKLCSEAAEYKFASVCVNPTWVPLCAE-------LLKGTGVKVCTVIG--FPLGA----------------------- 91 (239)
T ss_dssp HHHHHHHHHHHHTCSEEEECGGGHHHHHH-------HHTTSSCEEEEEES--TTTCC-----------------------
T ss_pred HHHHHHHHHHhcCCcEEEECHHHHHHHHH-------HhCCCCCeEEEEec--cCCCC-----------------------
Confidence 67888888889999998888766643322 22445555555333 33211
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEecc-cccccCCCcc--HHHHHHHHhccC--CCceEEecC
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDSD-DVCKHADSLR--ADIIAKVIGRLG--LEKTMFEAT 238 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEar-gi~d~~g~~r--~d~i~~ii~~l~--~~klifEAP 238 (254)
.+.+--+.+++..+++||+-|=+==. |-.. +|++. .+.|..+.+..+ +=|+|+|..
T Consensus 92 ~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk-~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~ 152 (239)
T 3ngj_A 92 TPSEVKAYETKVAVEQGAEEVDMVINIGMVK-AKKYDDVEKDVKAVVDASGKALTKVIIECC 152 (239)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCHHHHH-TTCHHHHHHHHHHHHHHHTTSEEEEECCGG
T ss_pred CchHHHHHHHHHHHHcCCCEEEEEeehHHhc-cccHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 12566688899999999987644332 3221 34433 344555555544 457788876
No 445
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=57.06 E-value=10 Score=34.69 Aligned_cols=47 Identities=17% Similarity=0.176 Sum_probs=38.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
+++++++.+.+|.+|||..|=+=.|.=-+...+.+.+...+++.++-
T Consensus 46 TpeEIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR 92 (316)
T 3c6c_A 46 TPAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVR 92 (316)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHH
Confidence 69999999999999999999999995433445677777777776553
No 446
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp}
Probab=57.06 E-value=22 Score=31.44 Aligned_cols=63 Identities=8% Similarity=0.217 Sum_probs=38.9
Q ss_pred HHHHHHHhCCceecC--CcH---------HHHHHHhCCc----hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHH
Q 025344 74 EVVKRAHQHDVYVST--GDW---------AEHLIRNGPS----AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRL 138 (254)
Q Consensus 74 eKi~l~~~~gV~v~~--Gtl---------~E~a~~qg~~----~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~ 138 (254)
+-++.+|+.|++|.+ |+| |..++ .++. -++.-++.|++.|||.|.|.=-.. +.+++..++..
T Consensus 57 ~~~~~~~~~~~kv~lsigg~~~~~~~~~~~~~~~-~~~~~r~~fi~si~~~~~~~gfDGiDiDwE~p--~~~d~~~~~~l 133 (319)
T 3cz8_A 57 AAIETTWQRRVTPLATITNLTSGGFSTEIVHQVL-NNPTARTNLVNNIYDLVSTRGYGGVTIDFEQV--SAADRDLFTGF 133 (319)
T ss_dssp HHHHHHHHTTCEEEEEEECEETTEECHHHHHHHH-TCHHHHHHHHHHHHHHHHHHTCSEEEEECCSC--CGGGHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEEecCCCCCcCHHHHHHHH-cCHHHHHHHHHHHHHHHHHhCCCeEEEeccCC--CHHHHHHHHHH
Confidence 346678999997765 543 22222 2211 367777889999999999975443 24454444433
Q ss_pred H
Q 025344 139 V 139 (254)
Q Consensus 139 ~ 139 (254)
+
T Consensus 134 l 134 (319)
T 3cz8_A 134 L 134 (319)
T ss_dssp H
T ss_pred H
Confidence 3
No 447
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=57.04 E-value=15 Score=34.19 Aligned_cols=52 Identities=17% Similarity=0.257 Sum_probs=40.1
Q ss_pred chHHHHHHHHHHcCCCEEEec---CC----------------cccCC---------hhHHHHHHHHHHHcCCcccceeee
Q 025344 101 SAFKEYVEDCKQVGFDTIELN---VG----------------SLEIP---------EETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEIS---dG----------------ti~i~---------~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
..+++.++.++++|+++|.+- || ..+++ .+..-++|..|+++|++|+--+.-
T Consensus 43 ~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~ 122 (383)
T 3pzg_A 43 RMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLVN 122 (383)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCB
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccCCCcccccccccchHHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 468999999999999999873 33 22211 455668999999999999987764
No 448
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=57.04 E-value=10 Score=37.04 Aligned_cols=46 Identities=15% Similarity=0.034 Sum_probs=35.2
Q ss_pred HHHHHH-cCCCEEEecCCc--------cc-----C-----ChhHHHHHHHHHHHcC--C--cccceeee
Q 025344 107 VEDCKQ-VGFDTIELNVGS--------LE-----I-----PEETLLRYVRLVKSAG--L--KAKPKFAV 152 (254)
Q Consensus 107 l~~~k~-lGF~~IEISdGt--------i~-----i-----~~~~r~~lI~~~~~~G--~--~v~~E~g~ 152 (254)
|+++|+ |||++|+++==+ -. + +.++..++|+.+.++| + +|+-.+-.
T Consensus 197 LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~ 265 (637)
T 1ji1_A 197 LGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVF 265 (637)
T ss_dssp HHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECC
T ss_pred HHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEECc
Confidence 568899 999999997311 11 1 3689999999999999 9 87766544
No 449
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=57.02 E-value=12 Score=35.88 Aligned_cols=130 Identities=15% Similarity=0.205 Sum_probs=72.3
Q ss_pred HHHHHHHHcCCCEEEecC----------CcccC----------ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccc
Q 025344 105 EYVEDCKQVGFDTIELNV----------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRD 164 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISd----------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d 164 (254)
+-|.++++|||++|+++- |.-.. +.++..++|+.+.++|++|+-.+-..+-..+-. --
T Consensus 123 ~~l~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~~--~~ 200 (558)
T 3vgf_A 123 RKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPEGN--YM 200 (558)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSC--CG
T ss_pred HHHHHHHHcCCcEEEECCcccCCCCCCcCcccccccccccccCCHHHHHHHHHHHHHcCCEEEEEEeeccccCCCC--cc
Confidence 346788999999999862 22111 147889999999999999998886532111000 00
Q ss_pred cccccccc---cCCCccccc-------cCHHHHHHHHHHHH-HcCCcEEEEecc-cccccCC-CccHHHHHHHHhccCCC
Q 025344 165 RAFGAYVA---RAPRSTEYV-------EDVDLLIRRAERCL-EAGADMIMIDSD-DVCKHAD-SLRADIIAKVIGRLGLE 231 (254)
Q Consensus 165 ~~~~~~~~---~~~~~~~~~-------~d~~~~i~~~~~dL-eAGA~~ViiEar-gi~d~~g-~~r~d~i~~ii~~l~~~ 231 (254)
..+..++. ...|....- .-.+.+++.++..+ +.|+|=.-+.+= .+.+... .+-.++.+ .+.... -
T Consensus 201 ~~~~~~~~~~~~~~~g~~~n~~~~~~~~v~~~l~~~~~~w~~~~gvDGfR~D~~~~~~~~~~~~f~~~l~~-~~~~~~-~ 278 (558)
T 3vgf_A 201 VKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNVDGFRLSAVHAIIDTSPKHILEEIAD-VVHKYN-R 278 (558)
T ss_dssp GGTSCCEEEEEEETTEEEECSSSTTHHHHHHHHHHHHHHHHHHHCCCEEEESCGGGCCCCSSSCHHHHHHH-HHHHTT-C
T ss_pred cccCCccCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEecccccccccHHHHHHHHHH-HHhhcC-E
Confidence 00000111 012321110 11367788888888 689999999885 5544322 22222222 233333 4
Q ss_pred ceEEecC
Q 025344 232 KTMFEAT 238 (254)
Q Consensus 232 klifEAP 238 (254)
-+|=|+.
T Consensus 279 ~~iaE~~ 285 (558)
T 3vgf_A 279 IVIAESD 285 (558)
T ss_dssp EEEEECS
T ss_pred EEEEecC
Confidence 5666764
No 450
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=56.70 E-value=70 Score=27.85 Aligned_cols=102 Identities=19% Similarity=0.202 Sum_probs=64.1
Q ss_pred ChhHHHHHHHHHHhC--Cc---eec-C---CcHHHHHHHhCCchHHHHH---HHHHHcC-CCEEEecCCcccCChhHHHH
Q 025344 68 PKPFIEEVVKRAHQH--DV---YVS-T---GDWAEHLIRNGPSAFKEYV---EDCKQVG-FDTIELNVGSLEIPEETLLR 134 (254)
Q Consensus 68 ~~~~l~eKi~l~~~~--gV---~v~-~---Gtl~E~a~~qg~~~~~~yl---~~~k~lG-F~~IEISdGti~i~~~~r~~ 134 (254)
+.+.+.+.+..++++ ++ ..+ + ||-++ + .=++|+ +.+-+.| +++|.|- +..+.+...+
T Consensus 61 ~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~-----~--~~~~~~~ll~~~~~~~~~d~iDvE---l~~~~~~~~~ 130 (258)
T 4h3d_A 61 NIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKL-----I--SRDYYTTLNKEISNTGLVDLIDVE---LFMGDEVIDE 130 (258)
T ss_dssp CHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCC-----C--CHHHHHHHHHHHHHTTCCSEEEEE---GGGCHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCC-----C--CHHHHHHHHHHHHhcCCchhhHHh---hhccHHHHHH
Confidence 445677778777765 33 222 2 66432 1 223333 3444455 7887664 4577888889
Q ss_pred HHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEE
Q 025344 135 YVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (254)
Q Consensus 135 lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~Vii 204 (254)
+++.+++.|-+++-=++- .+.+ | +.+++++...+..+.|||.|=|
T Consensus 131 l~~~a~~~~~kiI~S~Hd---f~~T-------------P---------~~~el~~~~~~~~~~gaDIvKi 175 (258)
T 4h3d_A 131 VVNFAHKKEVKVIISNHD---FNKT-------------P---------KKEEIVSRLCRMQELGADLPKI 175 (258)
T ss_dssp HHHHHHHTTCEEEEEEEE---SSCC-------------C---------CHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHhCCCEEEEEEec---CCCC-------------C---------CHHHHHHHHHHHHHhCCCEEEE
Confidence 999999988887654443 1111 1 3678899999999999997543
No 451
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=56.55 E-value=34 Score=29.73 Aligned_cols=106 Identities=10% Similarity=0.045 Sum_probs=62.9
Q ss_pred HHHHhhccc-ccEEeecCcccccCC----hhHHHHHHHHHHhCCce---ecCC---c----HH---HHHHHhCCchHHHH
Q 025344 45 DIFESMGQF-VDGLKFSGGSHSLMP----KPFIEEVVKRAHQHDVY---VSTG---D----WA---EHLIRNGPSAFKEY 106 (254)
Q Consensus 45 DlLe~ag~y-ID~lKfg~GT~~l~~----~~~l~eKi~l~~~~gV~---v~~G---t----l~---E~a~~qg~~~~~~y 106 (254)
+.|+.+.+. .|++=+.......++ ...+++.-+++.++|+. ++.. . +. +....+..+.+++.
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~ 114 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKISTNVGATRTFDPSSNYPEQRQEALEYLKSR 114 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEECCCCSSSCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 455544443 677777655332333 14588888999999998 6631 1 11 11111111268999
Q ss_pred HHHHHHcCCCEEEecC-----Ccc-c-CC-------------hhH-------HHHHHHHHHHcCCcccceee
Q 025344 107 VEDCKQVGFDTIELNV-----GSL-E-IP-------------EET-------LLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 107 l~~~k~lGF~~IEISd-----Gti-~-i~-------------~~~-------r~~lI~~~~~~G~~v~~E~g 151 (254)
++.|+.||.+.| +.- |.. . .+ .+. ..++.+.+++.|+++.-|..
T Consensus 115 i~~A~~lG~~~v-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 185 (335)
T 2qw5_A 115 VDITAALGGEIM-MGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKKVKLAIEPI 185 (335)
T ss_dssp HHHHHHTTCSEE-EECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHcCCCEE-eccccCccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeC
Confidence 999999999999 642 222 1 11 222 23556677788888777664
No 452
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=56.51 E-value=13 Score=37.11 Aligned_cols=120 Identities=13% Similarity=0.122 Sum_probs=66.9
Q ss_pred HHHHHHHcCCCEEEecC-------------------Cccc---------CC--------hhHHHHHHHHHHHcCCcccce
Q 025344 106 YVEDCKQVGFDTIELNV-------------------GSLE---------IP--------EETLLRYVRLVKSAGLKAKPK 149 (254)
Q Consensus 106 yl~~~k~lGF~~IEISd-------------------Gti~---------i~--------~~~r~~lI~~~~~~G~~v~~E 149 (254)
-+.++|+|||++|+++= |.-. .. .++..++|+.+.++|++|+-.
T Consensus 207 ~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~VilD 286 (718)
T 2vr5_A 207 MISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIID 286 (718)
T ss_dssp HHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred hhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCcccCcccChhhcCCCCCCchHHHHHHHHHHHHHCCCEEEEE
Confidence 37788999999999871 3221 11 489999999999999999887
Q ss_pred eeeecCCCCCCCc-------ccc-cc--------ccccccCC----CccccccCHHHHHHHHHHHHH-cCCcEEEEeccc
Q 025344 150 FAVMFNKSDIPSD-------RDR-AF--------GAYVARAP----RSTEYVEDVDLLIRRAERCLE-AGADMIMIDSDD 208 (254)
Q Consensus 150 ~g~k~~~s~v~~~-------~d~-~~--------~~~~~~~~----~~~~~~~d~~~~i~~~~~dLe-AGA~~ViiEarg 208 (254)
+-..+-...-... .|. .. ..+..-.. +..+...-.+.+++.++..++ .|+|=.-+.+=.
T Consensus 287 vV~NH~~~~~~~~~~~~~~~~~~~~yy~~~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e~gvDGfR~D~~~ 366 (718)
T 2vr5_A 287 VVYNHTAEGNHLGPTLSFRGIDNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLAA 366 (718)
T ss_dssp ECCSCCSSCSTTSCCSSHHHHHSTTTBCBCTTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTTCCCEEEETTGG
T ss_pred eccCcccCccccCccccccCCCCCcceEeCCCCCceeecCCCccCeecCCCHHHHHHHHHHHHHHHHHcCCCEEEEcchh
Confidence 7553211100000 000 00 00000000 001111223677888888887 899999888864
Q ss_pred c-cccCCCcc--HHHHHHHH
Q 025344 209 V-CKHADSLR--ADIIAKVI 225 (254)
Q Consensus 209 i-~d~~g~~r--~d~i~~ii 225 (254)
. ....+.+. ...+..|-
T Consensus 367 ~l~~~~~~~~~~~~~~~~i~ 386 (718)
T 2vr5_A 367 ALARELYSVNMLNTFFIALQ 386 (718)
T ss_dssp GGGBSSSSBCTTCHHHHHHH
T ss_pred hhhhccCCccchHHHHHHHH
Confidence 3 33333332 34555553
No 453
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=56.51 E-value=40 Score=28.23 Aligned_cols=28 Identities=21% Similarity=0.266 Sum_probs=21.6
Q ss_pred CCCccHHHHHHHHhccCCCceEEecCCch
Q 025344 213 ADSLRADIIAKVIGRLGLEKTMFEATNPR 241 (254)
Q Consensus 213 ~g~~r~d~i~~ii~~l~~~klifEAP~k~ 241 (254)
.|......+..+++.+| +|||||..-|.
T Consensus 203 s~~~~~~~~~~~~~~~~-dril~gSD~P~ 230 (272)
T 3cjp_A 203 SAYFSTFVLKIVINELP-LKCIFGTDMPF 230 (272)
T ss_dssp TTCSCHHHHHHHHHHST-TTEECCCCTTS
T ss_pred cccccHHHHHHHHHhCC-CeEEEeCCCCC
Confidence 45555567888999998 99999987654
No 454
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=56.38 E-value=11 Score=39.97 Aligned_cols=51 Identities=8% Similarity=0.128 Sum_probs=38.5
Q ss_pred HHHHHHHHHHcCCCEEEecCCccc----------------------C---------ChhHHHHHHHHHHHcCCcccceee
Q 025344 103 FKEYVEDCKQVGFDTIELNVGSLE----------------------I---------PEETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~----------------------i---------~~~~r~~lI~~~~~~G~~v~~E~g 151 (254)
+.+=+.++++||+++||++=-+-. + +.++..++|+.+.++|++|+-.+-
T Consensus 855 I~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i~~~yGt~edfk~LV~alH~~GI~VIlDvV 934 (1108)
T 3ttq_A 855 IAKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKYGTDGDLRATIQALHHANMQVMADVV 934 (1108)
T ss_dssp HHHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSSCCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCCCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 334477889999999998732221 1 346899999999999999998776
Q ss_pred ee
Q 025344 152 VM 153 (254)
Q Consensus 152 ~k 153 (254)
.-
T Consensus 935 ~N 936 (1108)
T 3ttq_A 935 DN 936 (1108)
T ss_dssp CS
T ss_pred cc
Confidence 63
No 455
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=56.27 E-value=58 Score=28.78 Aligned_cols=20 Identities=25% Similarity=0.293 Sum_probs=16.0
Q ss_pred HHHHHHHHHcCCcEEEEecc
Q 025344 188 IRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 188 i~~~~~dLeAGA~~ViiEar 207 (254)
.++++..+++|||-|||=+-
T Consensus 220 ~e~~~~~~~~gADgvIVGSA 239 (271)
T 3nav_A 220 PAQVKQAIEAGAAGAISGSA 239 (271)
T ss_dssp HHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHHcCCCEEEECHH
Confidence 45667789999999999663
No 456
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=56.22 E-value=8.9 Score=36.43 Aligned_cols=54 Identities=15% Similarity=0.197 Sum_probs=41.1
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcc---------cCCh---hHHHHHHHHHHHcCCcccceeee
Q 025344 99 GPSAFKEYVEDCKQVGFDTIELNVGSL---------EIPE---ETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 99 g~~~~~~yl~~~k~lGF~~IEISdGti---------~i~~---~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
++...++.++.++++||++|-|+-+-- .++. +...++|+.++++|++|+-.++-
T Consensus 43 ~~~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~ 108 (515)
T 3icg_A 43 NPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHH 108 (515)
T ss_dssp CCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred CCcCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCC
Confidence 345578999999999999999964422 2232 44567899999999999887765
No 457
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=56.00 E-value=1.1e+02 Score=27.04 Aligned_cols=52 Identities=10% Similarity=-0.044 Sum_probs=34.3
Q ss_pred HHHHHHHHHcCCcEEEEecccc--cc-------------cCCCccHHHHHHHHhccCCCceEEecCCc
Q 025344 188 IRRAERCLEAGADMIMIDSDDV--CK-------------HADSLRADIIAKVIGRLGLEKTMFEATNP 240 (254)
Q Consensus 188 i~~~~~dLeAGA~~ViiEargi--~d-------------~~g~~r~d~i~~ii~~l~~~klifEAP~k 240 (254)
.+++++.++.|.+.-+- .=|+ |. ....-+.+.+.++++..++++|+.|..-+
T Consensus 203 ~e~a~~~~~~G~~i~~~-~~G~~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p 269 (330)
T 2ob3_A 203 LSYLTALAARGYLIGLD-HIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWT 269 (330)
T ss_dssp HHHHHHHHHTTCEEEEC-CTTCCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred HHHHHHHHhCCCEEEeC-CCccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCC
Confidence 47888999999865443 1122 20 00113456688899999999999998544
No 458
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=55.88 E-value=27 Score=29.51 Aligned_cols=62 Identities=29% Similarity=0.363 Sum_probs=45.5
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCH
Q 025344 105 EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDV 184 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~ 184 (254)
++.+.++.+|++.|-++-..++ .++|+.+++.|++|.+ .++ . +
T Consensus 175 ~~~~~~~~~~~~~i~~~~~~~~------~~~v~~~~~~G~~v~~-wTv----------n-------------------~- 217 (247)
T 2otd_A 175 DWRELTARLGCVSIHLNHKLLD------KARVMQLKDAGLRILV-YTV----------N-------------------K- 217 (247)
T ss_dssp THHHHHHHHTCSEEEEEGGGCC------HHHHHHHHHTTCEEEE-ECC----------C-------------------C-
T ss_pred cHHHHHHHcCCeEEecChHhCC------HHHHHHHHHCCCEEEE-Ecc----------C-------------------C-
Confidence 4567789999999988765442 4789999999988765 223 1 1
Q ss_pred HHHHHHHHHHHHcCCcEEEEec
Q 025344 185 DLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 185 ~~~i~~~~~dLeAGA~~ViiEa 206 (254)
.+.+++.++.|++-||.+-
T Consensus 218 ---~~~~~~l~~~GvdgI~TD~ 236 (247)
T 2otd_A 218 ---PQHAAELLRWGVDCICTDA 236 (247)
T ss_dssp ---HHHHHHHHHHTCSEEEESC
T ss_pred ---HHHHHHHHHcCCCEEEeCC
Confidence 2456778899999999864
No 459
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=55.81 E-value=6.3 Score=33.91 Aligned_cols=64 Identities=16% Similarity=0.114 Sum_probs=50.5
Q ss_pred HHHhCCc-eecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 025344 78 RAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (254)
Q Consensus 78 l~~~~gV-~v~~-Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (254)
+++++|| .+.- |--.++|+.+- ..+ +.++||+.+=++|.+-+.+.+.....++.++..|-.|.+
T Consensus 151 ~L~~~gi~~lvv~G~~T~~CV~~T--a~d-----A~~~Gy~V~Vv~Da~as~~~~~h~~aL~~m~~~g~~v~~ 216 (227)
T 3r2j_A 151 LLHSIGARRVFVCGVAYDFCVFFT--AMD-----ARKNGFSVVLLEDLTAAVDDAAWSARTAELKDAGVVLLK 216 (227)
T ss_dssp HHHHHTCCEEEEEESCTTTHHHHH--HHH-----HHHTTCEEEEEEEEECCSCGGGHHHHHHHHHTTTCEEEC
T ss_pred HHHHcCCCEEEEEEeccchHHHHH--HHH-----HHHCCCEEEEEhHhhCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 4456688 4444 77888888875 333 566999999999999999999999999999998776554
No 460
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=55.50 E-value=8.7 Score=37.85 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=37.5
Q ss_pred HHHHHH--HHHHcCCCEEEecCCc------------------------ccC-----ChhHHHHHHHHHHHcCCcccceee
Q 025344 103 FKEYVE--DCKQVGFDTIELNVGS------------------------LEI-----PEETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 103 ~~~yl~--~~k~lGF~~IEISdGt------------------------i~i-----~~~~r~~lI~~~~~~G~~v~~E~g 151 (254)
+.+-|+ ++++|||++|.+|==+ ..+ +.++..+||+.+.++|++|+-.+-
T Consensus 54 i~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 54 IINKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp HHHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHhhcCHHHHHhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 344477 7899999999998311 011 368899999999999999887664
Q ss_pred e
Q 025344 152 V 152 (254)
Q Consensus 152 ~ 152 (254)
.
T Consensus 134 ~ 134 (680)
T 1cyg_A 134 P 134 (680)
T ss_dssp T
T ss_pred C
Confidence 4
No 461
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=55.48 E-value=25 Score=31.54 Aligned_cols=71 Identities=21% Similarity=0.227 Sum_probs=50.1
Q ss_pred HHcCCCEEEecCCc----------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCcccc
Q 025344 111 KQVGFDTIELNVGS----------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (254)
Q Consensus 111 k~lGF~~IEISdGt----------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~ 180 (254)
.+.||++|=+|+.+ ..++.++.+..++.+.+. .. +| +-+ |-.+| |
T Consensus 32 ~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~-~~-~P-via-----------D~d~G-y---------- 86 (290)
T 2hjp_A 32 EQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIAST-VS-IP-LIA-----------DIDTG-F---------- 86 (290)
T ss_dssp HHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTT-CS-SC-EEE-----------ECTTT-T----------
T ss_pred HHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhc-CC-CC-EEE-----------ECCCC-C----------
Confidence 34799999999732 357888888888888773 11 23 222 11111 1
Q ss_pred ccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 181 VEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 181 ~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
.++.+..+.+++.++|||.-|.||.-
T Consensus 87 -g~~~~~~~~v~~l~~aGa~gv~iED~ 112 (290)
T 2hjp_A 87 -GNAVNVHYVVPQYEAAGASAIVMEDK 112 (290)
T ss_dssp -SSHHHHHHHHHHHHHHTCSEEEEECB
T ss_pred -CCHHHHHHHHHHHHHhCCeEEEEcCC
Confidence 14888999999999999999999974
No 462
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=55.20 E-value=12 Score=34.26 Aligned_cols=46 Identities=20% Similarity=0.314 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhcc
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l 228 (254)
+++++++.+.+|.+|||..|=+=+|.=-+.....+.+...+++.++
T Consensus 30 TpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~I 75 (314)
T 3lot_A 30 TPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREI 75 (314)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHH
Confidence 6999999999999999999999999432333456777777777655
No 463
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens}
Probab=55.20 E-value=13 Score=32.96 Aligned_cols=53 Identities=15% Similarity=0.204 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHhCCceecC--CcHHHH-HHHh-CCc-hHHHHHHHHHHcCCCEEEec
Q 025344 69 KPFIEEVVKRAHQHDVYVST--GDWAEH-LIRN-GPS-AFKEYVEDCKQVGFDTIELN 121 (254)
Q Consensus 69 ~~~l~eKi~l~~~~gV~v~~--Gtl~E~-a~~q-g~~-~~~~yl~~~k~lGF~~IEIS 121 (254)
...+++.|..+|+.|++|.. |||--. ++.. .++ -++.+.+.+++.|||.|.|.
T Consensus 82 ~~~~~~~i~~~~~~g~kvllSiGG~~~~~~~~~~~r~~F~~s~~~~l~~ygfDGiDiD 139 (328)
T 4axn_A 82 DTEFRRQVGVLNSQGRAVLISLGGADAHIELKTGDEDKLKDEIIRLVEVYGFDGLDID 139 (328)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEETTCCCCCCTTCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCCCccCChHHHHHHHHHHHHHHHHhCCCeEEEe
Confidence 45689999999999997754 776311 1100 101 26677788899999999885
No 464
>2i2x_A MTAB, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=55.20 E-value=17 Score=34.85 Aligned_cols=103 Identities=18% Similarity=0.248 Sum_probs=64.8
Q ss_pred cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCC
Q 025344 90 DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSD 158 (254)
Q Consensus 90 tl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~ 158 (254)
.=.|.++.+=.+-...-++.|.++||..|-|-.-.+ ++.+..+ ..++...+ |+|+|.....
T Consensus 53 ~sk~~lv~ey~~i~~~~l~R~v~~g~P~vvlE~EhV~qmT~nP~Wg~e~a~~q~-~~meeyhD-------kYGiK~alr~ 124 (461)
T 2i2x_A 53 ASKEKLIKEYERITTDVMERMVQVGFPAIILETEHVQQMSNNPSWGAEVAHAQK-TIMEKYHD-------EYGIKCALRH 124 (461)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCHHHHHSHHHHHHHHHHHH-HHHHHHHH-------HHCCEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhhhccCCchHHHHHHHHH-HHHHHHHH-------HhchHHHHhc
Confidence 467777765433688899999999999998876655 3444444 55666666 6777765432
Q ss_pred CCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 159 IPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 159 v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
++ .+-++ .. -.|.. .-.......+..+.+-++|||++=||+-
T Consensus 125 T~-~DiRe-~~-~~~~l----Rg~~y~~~mEsfE~cA~~GAd~lsIES~ 166 (461)
T 2i2x_A 125 TI-GDIRE-NR-EFLQL----RGDKYSVFLEAFEQCAENGADLLSVESM 166 (461)
T ss_dssp EE-CCCCB-CS-SCBCT----TSTTHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred Ch-hhhcc-cc-ccccc----cchHHHHHHHHHHHHHhcCCCeEEEecc
Confidence 21 11111 00 00000 1123456569999999999999999996
No 465
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=55.06 E-value=40 Score=31.14 Aligned_cols=128 Identities=16% Similarity=0.151 Sum_probs=75.3
Q ss_pred cc-ccEEeecCcccccCChhHHHHHHHHHHhCCceecCC--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC-
Q 025344 52 QF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI- 127 (254)
Q Consensus 52 ~y-ID~lKfg~GT~~l~~~~~l~eKi~l~~~~gV~v~~G--tl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i- 127 (254)
+| +|++|+|-+. +.+-+.|++ +.- ..-=|.+++| |+-|+.. -++++++-|.+.|=+ -++-.-
T Consensus 122 ~~~v~~~KI~S~~--~~n~~LL~~-va~-~gkPviLstGmat~~Ei~~---------Ave~i~~~G~~iiLl-hc~s~Yp 187 (349)
T 2wqp_A 122 RMDIPAYKIGSGE--CNNYPLIKL-VAS-FGKPIILSTGMNSIESIKK---------SVEIIREAGVPYALL-HCTNIYP 187 (349)
T ss_dssp HHTCSCEEECGGG--TTCHHHHHH-HHT-TCSCEEEECTTCCHHHHHH---------HHHHHHHHTCCEEEE-ECCCCSS
T ss_pred hcCCCEEEECccc--ccCHHHHHH-HHh-cCCeEEEECCCCCHHHHHH---------HHHHHHHcCCCEEEE-eccCCCC
Confidence 36 8999998665 666554443 322 1233466677 6666542 233445556544432 133322
Q ss_pred -C-hhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCCcEEE
Q 025344 128 -P-EETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIM 203 (254)
Q Consensus 128 -~-~~~r~~lI~~~~~~--G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~Vi 203 (254)
| ++--++.|..+++. ++. +|. +.+..| +..+...+.+||+ |
T Consensus 188 ~~~~~~nL~ai~~lk~~f~~lp----Vg~--sdHt~G---------------------------~~~~~AAvAlGA~--i 232 (349)
T 2wqp_A 188 TPYEDVRLGGMNDLSEAFPDAI----IGL--SDHTLD---------------------------NYACLGAVALGGS--I 232 (349)
T ss_dssp CCGGGCCTHHHHHHHHHCTTSE----EEE--ECCSSS---------------------------SHHHHHHHHHTCC--E
T ss_pred CChhhcCHHHHHHHHHHCCCCC----EEe--CCCCCc---------------------------HHHHHHHHHhCCC--E
Confidence 2 33355778888774 111 233 111111 5667788999999 8
Q ss_pred Eec-----ccc--cccCCCccHHHHHHHHhcc
Q 025344 204 IDS-----DDV--CKHADSLRADIIAKVIGRL 228 (254)
Q Consensus 204 iEa-----rgi--~d~~g~~r~d~i~~ii~~l 228 (254)
||= +.. .|..-++..+.+.++++.+
T Consensus 233 IEkH~tld~a~~G~D~~~SL~p~ef~~lv~~i 264 (349)
T 2wqp_A 233 LERHFTDRMDRPGPDIVCSMNPDTFKELKQGA 264 (349)
T ss_dssp EEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHH
T ss_pred EEeCCCccccCCCCChhhhCCHHHHHHHHHHH
Confidence 895 334 8999999999998888554
No 466
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=54.82 E-value=92 Score=25.90 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=16.0
Q ss_pred HHHHHHHHHcCCcEEEEecccccc
Q 025344 188 IRRAERCLEAGADMIMIDSDDVCK 211 (254)
Q Consensus 188 i~~~~~dLeAGA~~ViiEargi~d 211 (254)
.+.++..+++||+-|++=+. +|+
T Consensus 203 ~e~i~~~~~~Gad~vivGsa-i~~ 225 (248)
T 1geq_A 203 REHVVSLLKEGANGVVVGSA-LVK 225 (248)
T ss_dssp HHHHHHHHHTTCSEEEECHH-HHH
T ss_pred HHHHHHHHHcCCCEEEEcHH-HHh
Confidence 35566667899999998543 443
No 467
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=54.70 E-value=9.4 Score=37.36 Aligned_cols=47 Identities=19% Similarity=0.244 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHcCCCEEEecC----------CcccCChhHHHHHHHHHHHcCCccccee
Q 025344 102 AFKEYVEDCKQVGFDTIELNV----------GSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISd----------Gti~i~~~~r~~lI~~~~~~G~~v~~E~ 150 (254)
..++=++.+|++||++|-++- |.. +.+...++|+.++++|++|+-.+
T Consensus 15 ~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g~~--d~~~ld~~ld~a~~~Gi~vil~~ 71 (645)
T 1kwg_A 15 RWKEDARRMREAGLSHVRIGEFAWALLEPEPGRL--EWGWLDEAIATLAAEGLKVVLGT 71 (645)
T ss_dssp HHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBC--CCHHHHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEeeechhhcCCCCCcc--ChHHHHHHHHHHHHCCCEEEEeC
Confidence 566667788888888888753 322 23445678888888888887544
No 468
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=54.58 E-value=17 Score=36.49 Aligned_cols=131 Identities=15% Similarity=0.136 Sum_probs=73.7
Q ss_pred HHHHHHHHHcCCCEEEecCC----------------------------------cccC-----ChhHHHHHHHHHHHcCC
Q 025344 104 KEYVEDCKQVGFDTIELNVG----------------------------------SLEI-----PEETLLRYVRLVKSAGL 144 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdG----------------------------------ti~i-----~~~~r~~lI~~~~~~G~ 144 (254)
.+-|.++++|||++|.++=- ...+ +.++..++|+.+.++|+
T Consensus 256 ~~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~GI 335 (695)
T 3zss_A 256 ARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLGL 335 (695)
T ss_dssp GGGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHCCC
Confidence 34477899999999998731 1122 24899999999999999
Q ss_pred cccceeeeecCCCCCC---------Cccccccc-cccccCCCcc--------ccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 145 KAKPKFAVMFNKSDIP---------SDRDRAFG-AYVARAPRST--------EYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 145 ~v~~E~g~k~~~s~v~---------~~~d~~~~-~~~~~~~~~~--------~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+|+-.+-..+.....- ...|.... ..-.|..|.+ +...-.+.+++.++..++.|+|=.-+.+
T Consensus 336 ~VilD~V~Nhs~~~~~~~~~~dwf~~~~dg~~~~~~~~~~~~~~~~dLn~~n~~p~V~~~l~~~l~~Wi~~GVDGfRlD~ 415 (695)
T 3zss_A 336 EIALDFALQCSPDHPWVHKHPEWFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRILRHWMDHGVRIFRVDN 415 (695)
T ss_dssp EEEEEECCEECTTSTHHHHCGGGSCCCTTSCCCCEEETTEEETTCEECCCSSCHHHHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred EEEEEeeccCCccchhhhcccceeeecCCCCcccCCCCCccccccccccccCCcHHHHHHHHHHHHHHHHhCCCEEEecC
Confidence 9997776542110000 00000000 0001111211 0011235678888888899988777665
Q ss_pred ccccccCCCccHHHHHHHHhcc---CCCc-eEEecCCc
Q 025344 207 DDVCKHADSLRADIIAKVIGRL---GLEK-TMFEATNP 240 (254)
Q Consensus 207 rgi~d~~g~~r~d~i~~ii~~l---~~~k-lifEAP~k 240 (254)
...+..+.+..+.+.+ .++- ++=|+-..
T Consensus 416 ------a~~~~~~f~~~~~~~v~~~~pd~~~vgE~~~~ 447 (695)
T 3zss_A 416 ------PHTKPVAFWERVIADINGTDPDVIFLAEAFTR 447 (695)
T ss_dssp ------GGGSCHHHHHHHHHHHHHHCTTCEEEECCCSC
T ss_pred ------cchhhHHHHHHHHHHHHhhCCCceEEEeecCC
Confidence 3445566666665444 2333 45577643
No 469
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=54.55 E-value=12 Score=36.78 Aligned_cols=50 Identities=10% Similarity=0.069 Sum_probs=37.4
Q ss_pred HHHHHH--HHHHcCCCEEEecCCcc--------------------------cC-----ChhHHHHHHHHHHHcCCcccce
Q 025344 103 FKEYVE--DCKQVGFDTIELNVGSL--------------------------EI-----PEETLLRYVRLVKSAGLKAKPK 149 (254)
Q Consensus 103 ~~~yl~--~~k~lGF~~IEISdGti--------------------------~i-----~~~~r~~lI~~~~~~G~~v~~E 149 (254)
+.+-|+ ++++|||++|.||==+- .+ +.++..+||+.+.++|++|+-.
T Consensus 57 i~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GikVilD 136 (683)
T 3bmv_A 57 IINKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIID 136 (683)
T ss_dssp HHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 334467 78999999999984111 11 2678999999999999998876
Q ss_pred eee
Q 025344 150 FAV 152 (254)
Q Consensus 150 ~g~ 152 (254)
+-.
T Consensus 137 ~V~ 139 (683)
T 3bmv_A 137 FAP 139 (683)
T ss_dssp ECT
T ss_pred Ecc
Confidence 544
No 470
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=54.53 E-value=26 Score=29.98 Aligned_cols=63 Identities=17% Similarity=0.328 Sum_probs=31.7
Q ss_pred HHHHHHHHHhCC--c-eecCCc-HHHHHHHhCCchHHHHHHHHHH-cCCCEEEecCCcccCChhHHHHHHHHHHHcC
Q 025344 72 IEEVVKRAHQHD--V-YVSTGD-WAEHLIRNGPSAFKEYVEDCKQ-VGFDTIELNVGSLEIPEETLLRYVRLVKSAG 143 (254)
Q Consensus 72 l~eKi~l~~~~g--V-~v~~Gt-l~E~a~~qg~~~~~~yl~~~k~-lGF~~IEISdGti~i~~~~r~~lI~~~~~~G 143 (254)
+++-++++.+.+ + .+-.|. +| +..|+.- ++.+++ .|+..+ +.-=..+||+--. ++++.+.+.|
T Consensus 24 ~~~a~~~v~~~~~~v~~~Kvg~~lf---~~~G~~~----v~~l~~~~g~~v~-lD~Kl~DipnTv~-~~~~~~~~~g 91 (228)
T 3m47_A 24 RDDALRVTGEVREYIDTVKIGYPLV---LSEGMDI----IAEFRKRFGCRII-ADFKVADIPETNE-KICRATFKAG 91 (228)
T ss_dssp HHHHHHHHHTTTTTCSEEEEEHHHH---HHHCTHH----HHHHHHHHCCEEE-EEEEECSCHHHHH-HHHHHHHHTT
T ss_pred HHHHHHHHHHcCCcccEEEEcHHHH---HhcCHHH----HHHHHhcCCCeEE-EEEeecccHhHHH-HHHHHHHhCC
Confidence 666667766665 3 333463 44 4566433 334444 455433 3434445554433 4555555555
No 471
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=54.42 E-value=20 Score=33.00 Aligned_cols=74 Identities=9% Similarity=0.120 Sum_probs=47.7
Q ss_pred cCChhHHHHHHHHHHhCCceec----CC--cH-HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc--------ccCChh
Q 025344 66 LMPKPFIEEVVKRAHQHDVYVS----TG--DW-AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS--------LEIPEE 130 (254)
Q Consensus 66 l~~~~~l~eKi~l~~~~gV~v~----~G--tl-~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt--------i~i~~~ 130 (254)
.++.+.|++-|+....++..+. +- +| +|+-. .+ +.. . .++.=+.|. --.+.+
T Consensus 29 f~~~~~ik~~id~mA~~KlN~lH~HltDdq~~rle~~~-~~-~~~-------~----~~~~~~~g~~~~~~~~~g~YT~~ 95 (367)
T 1yht_A 29 FYSPEVIKSFIDTISLSGGNFLHLHFSDHENYAIESHL-LN-QRA-------E----NAVQGKDGIYINPYTGKPFLSYR 95 (367)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECBSSSCBCBCBTT-TT-BCG-------G----GSEECTTSCEECTTTCCEEBCHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEEcCCCceeeecc-hh-hhh-------h----hhccccCCCcCCCCCCCCCcCHH
Confidence 5778889999999988888554 22 44 44311 01 000 0 000001221 248899
Q ss_pred HHHHHHHHHHHcCCcccceeee
Q 025344 131 TLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 131 ~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
+-.++++.|+++|..|+||+-.
T Consensus 96 di~eiv~YA~~rgI~VIPEID~ 117 (367)
T 1yht_A 96 QLDDIKAYAKAKGIELIPELDS 117 (367)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEeccc
Confidence 9999999999999999999875
No 472
>3hvb_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; 2.99A {Pseudomonas aeruginosa PAO1}
Probab=54.28 E-value=27 Score=31.82 Aligned_cols=88 Identities=8% Similarity=-0.037 Sum_probs=56.6
Q ss_pred cccCChhHHHHHHHHHHhCCceecC-C-cHHHHHHHhCCchHHHHHHHHHHcCC----------------------CEEE
Q 025344 64 HSLMPKPFIEEVVKRAHQHDVYVST-G-DWAEHLIRNGPSAFKEYVEDCKQVGF----------------------DTIE 119 (254)
Q Consensus 64 ~~l~~~~~l~eKi~l~~~~gV~v~~-G-tl~E~a~~qg~~~~~~yl~~~k~lGF----------------------~~IE 119 (254)
..+..++.+....++++++++.+.- - -+-|.++..+...+.+.++.++++|| |.|-
T Consensus 283 ~~l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~l~~~G~~ialDDfG~g~ssl~~L~~l~~d~iK 362 (437)
T 3hvb_A 283 ASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFIK 362 (437)
T ss_dssp HHHHCTTHHHHHHHHHHTTTCCTTCEEEEEEHHHHHHTHHHHHHHHHHHHHTTCEEEEEEETCSSSHHHHHTTSCCSEEE
T ss_pred HHhCCchHHHHHHHHHHHcCCChhhEEEEEEchhhhhCHHHHHHHHHHHHHCCCEEEEcCCCCCccHHHHHhhCCCCEEE
Confidence 3456666777777888888864332 1 24566666655567777777776665 6677
Q ss_pred ecCCccc-CChhH----HHHHHHHHHHcCCcccceeee
Q 025344 120 LNVGSLE-IPEET----LLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 120 ISdGti~-i~~~~----r~~lI~~~~~~G~~v~~E~g~ 152 (254)
|+-.++. +..+. -..+|..+++.|.+|+.| ||
T Consensus 363 iD~~~i~~~~~~~~~~~~~~~i~~~~~~~~~viae-gV 399 (437)
T 3hvb_A 363 IDGSFVQDLNQVENQEILKGLIAELHEQQKLSIVP-FV 399 (437)
T ss_dssp ECGGGSSCCSSHHHHHHHHHHHHHHHHTTCEEEEC-CC
T ss_pred ECHHHHHhHhhCcHHHHHHHHHHHHHHcCCCEEee-ee
Confidence 7655552 33332 346778888888888887 77
No 473
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=54.05 E-value=1.1e+02 Score=27.43 Aligned_cols=81 Identities=7% Similarity=0.100 Sum_probs=54.7
Q ss_pred CChhHHHHHHHHHHhCCceecC--C--cHHH----HHHHhCC----------------chHHHHHHHHHHcCCCEEEecC
Q 025344 67 MPKPFIEEVVKRAHQHDVYVST--G--DWAE----HLIRNGP----------------SAFKEYVEDCKQVGFDTIELNV 122 (254)
Q Consensus 67 ~~~~~l~eKi~l~~~~gV~v~~--G--tl~E----~a~~qg~----------------~~~~~yl~~~k~lGF~~IEISd 122 (254)
.+.+.+++.+++++++|..+.. - .+.+ .+...|. ..+.+.++.+++.|... -+.
T Consensus 166 ~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~-~i~- 243 (448)
T 3hm7_A 166 SHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPI-HIC- 243 (448)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCE-EEC-
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCE-EEE-
Confidence 3667899999999999987764 2 2322 1111111 14667788888888763 332
Q ss_pred CcccCChhHHHHHHHHHHHcCCcccceeee
Q 025344 123 GSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
-++..+-.++|+.+++.|+.|..|+..
T Consensus 244 ---H~s~~~~~~~i~~ak~~G~~v~~e~~p 270 (448)
T 3hm7_A 244 ---HVSSRKVLKRIKQAKGEGVNVSVETCP 270 (448)
T ss_dssp ---CCCCHHHHHHHHHHHHTTCCEEEEECH
T ss_pred ---eCCCHHHHHHHHHHHhcCCCEEEEech
Confidence 334667779999999999988877754
No 474
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=53.87 E-value=28 Score=30.85 Aligned_cols=107 Identities=14% Similarity=0.152 Sum_probs=63.2
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcc-------------cCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccc
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGSL-------------EIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRA 166 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti-------------~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~s~v~~~~d~~ 166 (254)
+.+.+..+.+++. ||.|||+-|+= .=..+.-.++|+.+++. ++ -+++|... |
T Consensus 71 ~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~----pv~vKir~---G------ 136 (318)
T 1vhn_A 71 NELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSG----KFSVKTRL---G------ 136 (318)
T ss_dssp HHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSS----EEEEEEES---C------
T ss_pred HHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCC----CEEEEecC---C------
Confidence 4566677777888 99999986642 12334455677777663 32 25665321 1
Q ss_pred cccccccCCCccccccCHHHHHHHHHHHHHcCCcEEEEecc---cccc------------------cCCCc-cHHHHHHH
Q 025344 167 FGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD---DVCK------------------HADSL-RADIIAKV 224 (254)
Q Consensus 167 ~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar---gi~d------------------~~g~~-r~d~i~~i 224 (254)
|. .++.++.++...++|++.|+|-+| +-+. .+|.+ ..+.+.++
T Consensus 137 ---------~~------~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~~ipVi~~GgI~s~~da~~~ 201 (318)
T 1vhn_A 137 ---------WE------KNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEKRIPTFVSGDIFTPEDAKRA 201 (318)
T ss_dssp ---------SS------SCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCCSSCEEEESSCCSHHHHHHH
T ss_pred ---------CC------hHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHcCCeEEEECCcCCHHHHHHH
Confidence 10 111236777778999999999875 1111 13554 35566666
Q ss_pred HhccCCCceEEe
Q 025344 225 IGRLGLEKTMFE 236 (254)
Q Consensus 225 i~~l~~~klifE 236 (254)
++..+.+-+|+=
T Consensus 202 l~~~gad~V~iG 213 (318)
T 1vhn_A 202 LEESGCDGLLVA 213 (318)
T ss_dssp HHHHCCSEEEES
T ss_pred HHcCCCCEEEEC
Confidence 665566666553
No 475
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=53.71 E-value=46 Score=29.66 Aligned_cols=74 Identities=19% Similarity=0.326 Sum_probs=49.4
Q ss_pred HHHcCCCEEEecCC----------cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccc
Q 025344 110 CKQVGFDTIELNVG----------SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (254)
Q Consensus 110 ~k~lGF~~IEISdG----------ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~ 179 (254)
+.+.||++|=+.|. |..++.++-+...+.+.+. -. .+=+-. ++| |+.|.
T Consensus 33 ~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~-~~-~~~vva-----D~p------fgsy~-------- 91 (264)
T 1m3u_A 33 FADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRG-AP-NCLLLA-----DLP------FMAYA-------- 91 (264)
T ss_dssp HHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHH-CT-TSEEEE-----ECC------TTSSS--------
T ss_pred HHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhh-CC-CCcEEE-----ECC------CCCcC--------
Confidence 45679999988652 3467788888777777662 00 000111 111 12221
Q ss_pred cccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 180 YVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 180 ~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
++++.++.+.+.+++||+.|-+|+-
T Consensus 92 ---~~~~a~~~a~rl~kaGa~aVklEgg 116 (264)
T 1m3u_A 92 ---TPEQAFENAATVMRAGANMVKIEGG 116 (264)
T ss_dssp ---SHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred ---CHHHHHHHHHHHHHcCCCEEEECCc
Confidence 5899999999999999999999984
No 476
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=53.70 E-value=13 Score=33.53 Aligned_cols=46 Identities=20% Similarity=0.192 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccccccCCCccHHHHHHHHhccC
Q 025344 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (254)
Q Consensus 183 d~~~~i~~~~~dLeAGA~~ViiEargi~d~~g~~r~d~i~~ii~~l~ 229 (254)
+++++++.+.+|.+|||..|=+=.|.=- ....++.+...+++.++-
T Consensus 32 TpeEia~~A~~~~~AGAaivHlH~Rd~~-G~ps~d~~~~~e~~~~IR 77 (284)
T 3chv_A 32 TVSEQVESTQEAFEAGAAIAHCHVRNDD-GTPSSDPDRFARLTEGLH 77 (284)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEECEECTT-SCEECCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEeeecCCC-CCcCCCHHHHHHHHHHHH
Confidence 6999999999999999999999998432 345667777777775543
No 477
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=53.42 E-value=22 Score=29.47 Aligned_cols=17 Identities=29% Similarity=0.604 Sum_probs=8.7
Q ss_pred HHHHHHHcCCcEEEEec
Q 025344 190 RAERCLEAGADMIMIDS 206 (254)
Q Consensus 190 ~~~~dLeAGA~~ViiEa 206 (254)
.++...++|||+|.+=+
T Consensus 70 ~v~~~~~~Gad~vtvh~ 86 (208)
T 2czd_A 70 IARKVFGAGADYVIVHT 86 (208)
T ss_dssp HHHHHHHTTCSEEEEES
T ss_pred HHHHHHhcCCCEEEEec
Confidence 34444455555555544
No 478
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=53.36 E-value=17 Score=36.47 Aligned_cols=47 Identities=15% Similarity=0.180 Sum_probs=36.7
Q ss_pred HHHHHHcCCCEEEecC----------------------Cccc---------C-C-------hhHHHHHHHHHHHcCCccc
Q 025344 107 VEDCKQVGFDTIELNV----------------------GSLE---------I-P-------EETLLRYVRLVKSAGLKAK 147 (254)
Q Consensus 107 l~~~k~lGF~~IEISd----------------------Gti~---------i-~-------~~~r~~lI~~~~~~G~~v~ 147 (254)
+.++|+|||++|+++= |.-. . + .++..++|+.+.++|++|+
T Consensus 211 l~yLk~LGvt~V~L~Pi~~~~~~~~~~~~~~~g~~~~wGY~~~dy~~~~~~yGt~~~~~~~~~efk~lV~~~H~~Gi~Vi 290 (750)
T 1bf2_A 211 ASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVY 290 (750)
T ss_dssp HHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHcCCCEEEECCcccCccccccccccccccccccCcCcccccccCccccCCCCCccHHHHHHHHHHHHHHCCCEEE
Confidence 7788999999999861 2211 1 1 6899999999999999998
Q ss_pred ceeeee
Q 025344 148 PKFAVM 153 (254)
Q Consensus 148 ~E~g~k 153 (254)
-.+-..
T Consensus 291 lDvV~N 296 (750)
T 1bf2_A 291 MDVVYN 296 (750)
T ss_dssp EEECCS
T ss_pred EEEecc
Confidence 777653
No 479
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=53.34 E-value=46 Score=27.83 Aligned_cols=65 Identities=17% Similarity=0.269 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
.+-+..+.+-+-|+++||+..-+ ....+.|+.+++ ++.-+..+. + +.
T Consensus 26 ~~~~~~~~l~~gGv~~iel~~k~-----~~~~~~i~~~~~------~~~~~gag~--v-----------l~--------- 72 (207)
T 2yw3_A 26 DLLGLARVLEEEGVGALEITLRT-----EKGLEALKALRK------SGLLLGAGT--V-----------RS--------- 72 (207)
T ss_dssp CHHHHHHHHHHTTCCEEEEECSS-----THHHHHHHHHTT------SSCEEEEES--C-----------CS---------
T ss_pred HHHHHHHHHHHcCCCEEEEeCCC-----hHHHHHHHHHhC------CCCEEEeCe--E-----------ee---------
Confidence 34455666677899999998432 233577888777 122221110 1 11
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEe
Q 025344 182 EDVDLLIRRAERCLEAGADMIMID 205 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiE 205 (254)
-++++..+++||+.|..-
T Consensus 73 ------~d~~~~A~~~GAd~v~~~ 90 (207)
T 2yw3_A 73 ------PKEAEAALEAGAAFLVSP 90 (207)
T ss_dssp ------HHHHHHHHHHTCSEEEES
T ss_pred ------HHHHHHHHHcCCCEEEcC
Confidence 477888899999999753
No 480
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=53.24 E-value=12 Score=31.77 Aligned_cols=87 Identities=14% Similarity=0.137 Sum_probs=30.0
Q ss_pred CceeEecCCCCCCcchhHHHHHHHhhcccccEEeecCcccccCChhHHHHHHHHHHhC----Cce---------ecCCcH
Q 025344 25 GVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH----DVY---------VSTGDW 91 (254)
Q Consensus 25 GlT~V~DkG~~~~~g~~~~~DlLe~ag~yID~lKfg~GT~~l~~~~~l~eKi~l~~~~----gV~---------v~~Gtl 91 (254)
++..+.+=|+ . .+..++.+++. | .|.+ ..||.++.+++.+++..+.+-.. ++. +++-+|
T Consensus 79 ~ipvi~~Ggi--~-~~~~~~~~l~~-G--ad~V--~ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~ 150 (247)
T 3tdn_A 79 TLPIIASGGA--G-KMEHFLEAFLR-G--ADKV--SINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSG 150 (247)
T ss_dssp CSCEEEESCC--C-SHHHHHHHHHT-T--CSEE--CCSHHHHHCTHHHHHHHHHHC------------------------
T ss_pred CCCEEEeCCC--C-CHHHHHHHHHc-C--CCee--ehhhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCC
Confidence 5666666565 2 45667777753 4 5654 56788887777676666555211 221 222233
Q ss_pred HHHHHHhCCchHHHHHHHHHHcCCCEEEecCC
Q 025344 92 AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG 123 (254)
Q Consensus 92 ~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdG 123 (254)
.|.. . ....++.+.+.++|++.|=+++-
T Consensus 151 ~~~~--~--~~~~~~a~~~~~~G~~~i~~t~~ 178 (247)
T 3tdn_A 151 KKNT--G--ILLRDWVVEVEKRGAGEILLTSI 178 (247)
T ss_dssp --------------------------------
T ss_pred cccC--C--CCHHHHHHHHHhcCCCEEEEecc
Confidence 3321 1 13556788888999999987653
No 481
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=53.17 E-value=48 Score=28.94 Aligned_cols=73 Identities=22% Similarity=0.320 Sum_probs=45.7
Q ss_pred chHHHHHHHHHHcCCC--EEEecCCc----ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccC
Q 025344 101 SAFKEYVEDCKQVGFD--TIELNVGS----LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~--~IEISdGt----i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~ 174 (254)
.++.+-++.+.+.|.+ ++-|-||. +++.. .+|+.+++......-.+..+
T Consensus 40 ~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~----~~v~~lr~~~p~~~ldvHLm--------------------- 94 (246)
T 3inp_A 40 ARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGP----MVLKALRDYGITAGMDVHLM--------------------- 94 (246)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCH----HHHHHHHHHTCCSCEEEEEE---------------------
T ss_pred hhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCH----HHHHHHHHhCCCCeEEEEEe---------------------
Confidence 3678888999999998 67778887 45655 44555555321111122222
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 175 ~~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
+.+|+.+ ++.+.+||||+|.+=.+
T Consensus 95 ------v~~p~~~---i~~~~~aGAd~itvH~E 118 (246)
T 3inp_A 95 ------VKPVDAL---IESFAKAGATSIVFHPE 118 (246)
T ss_dssp ------CSSCHHH---HHHHHHHTCSEEEECGG
T ss_pred ------eCCHHHH---HHHHHHcCCCEEEEccc
Confidence 2245554 45578999999999654
No 482
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=53.12 E-value=1.3e+02 Score=27.37 Aligned_cols=18 Identities=33% Similarity=0.486 Sum_probs=14.0
Q ss_pred HHHHHHHHcCCcEEEEec
Q 025344 189 RRAERCLEAGADMIMIDS 206 (254)
Q Consensus 189 ~~~~~dLeAGA~~ViiEa 206 (254)
+.+.+.|++||+.|++=+
T Consensus 220 ~di~kala~GAd~V~vGs 237 (361)
T 3khj_A 220 GDIGKALAVGASSVMIGS 237 (361)
T ss_dssp HHHHHHHHHTCSEEEEST
T ss_pred HHHHHHHHcCCCEEEECh
Confidence 456667899999999854
No 483
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=53.06 E-value=1.2e+02 Score=26.80 Aligned_cols=92 Identities=11% Similarity=0.071 Sum_probs=54.4
Q ss_pred ccEEeecCccc-----ccCChhHHHHHHHHHHhCCceecC---C-cHHHHH----HHhCC----------------chHH
Q 025344 54 VDGLKFSGGSH-----SLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHL----IRNGP----------------SAFK 104 (254)
Q Consensus 54 ID~lKfg~GT~-----~l~~~~~l~eKi~l~~~~gV~v~~---G-tl~E~a----~~qg~----------------~~~~ 104 (254)
++.+|++.+.+ ...+.+.+++-++.++++|..+.. . ...+.+ ...|. ..++
T Consensus 143 ~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G~~~~~~h~~~~~~~~~~~~~~ 222 (458)
T 1gkr_A 143 AVGFKSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQ 222 (458)
T ss_dssp CCEEEEESSCSBTTTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHH
T ss_pred CcEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhcCccchhhccccCCHHHHHHHHH
Confidence 66788765433 245677899999999999987653 2 233322 23331 1134
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccccee
Q 025344 105 EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (254)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~ 150 (254)
+.++.+++.|... -+. .++...=.++|+.+++.|+.+..|+
T Consensus 223 ~~~~la~~~g~~~-h~~----H~~~~~~~~~i~~~~~~G~~v~~~~ 263 (458)
T 1gkr_A 223 RALLLQKEAGCRL-IVL----HVSNPDGVELIHQAQSEGQDVHCES 263 (458)
T ss_dssp HHHHHHHHHCCEE-EEC----CCCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhCCCE-EEE----eCCCHHHHHHHHHHHHCCCcEEEEE
Confidence 5566678888752 121 2223333467777888887665554
No 484
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=53.04 E-value=22 Score=30.57 Aligned_cols=70 Identities=26% Similarity=0.300 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHcCCCE--EEecCCc----ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCC
Q 025344 102 AFKEYVEDCKQVGFDT--IELNVGS----LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~--IEISdGt----i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
.+.+-++.+ +.|.++ |-|-||. +++.. .+|+.+++. ....-.+..+
T Consensus 14 ~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~----~~v~~lr~~-~~~~~dvhLm---------------------- 65 (231)
T 3ctl_A 14 KFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSP----FFVSQVKKL-ATKPLDCHLM---------------------- 65 (231)
T ss_dssp GHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCH----HHHHHHHTT-CCSCEEEEEE----------------------
T ss_pred hHHHHHHHH-HcCCCEEEEEEEeCccCccchhcH----HHHHHHHhc-cCCcEEEEEE----------------------
Confidence 678888889 899997 5666998 44443 467776663 1111122222
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
+.||+.+ ++.+.+|||+.|++=.+
T Consensus 66 -----v~dp~~~---i~~~~~aGAd~itvh~E 89 (231)
T 3ctl_A 66 -----VTRPQDY---IAQLARAGADFITLHPE 89 (231)
T ss_dssp -----SSCGGGT---HHHHHHHTCSEEEECGG
T ss_pred -----ecCHHHH---HHHHHHcCCCEEEECcc
Confidence 2234433 46778899999987544
No 485
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=52.91 E-value=14 Score=36.42 Aligned_cols=101 Identities=15% Similarity=0.107 Sum_probs=60.6
Q ss_pred HHHHHHHcCCCEEEecC-------------------Ccc---------cCC------hhHHHHHHHHHHHcCCcccceee
Q 025344 106 YVEDCKQVGFDTIELNV-------------------GSL---------EIP------EETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 106 yl~~~k~lGF~~IEISd-------------------Gti---------~i~------~~~r~~lI~~~~~~G~~v~~E~g 151 (254)
-+.++|+|||++|+++= |.- ... .++..++|+.+.++|++|+-.+-
T Consensus 184 ~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~~G~~p~~~~~d~~~lv~~~H~~Gi~VilD~V 263 (657)
T 2wsk_A 184 MINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIV 263 (657)
T ss_dssp HHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECGGGCSSGGGHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred chHHHHHcCCCEEEECCccccCccccccccccccccCcCcccCCCCCHHHcCCCCcCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 47788999999999871 221 122 58899999999999999998876
Q ss_pred eecCCCCCCCc-------cccccccccc--c-C---CC-------ccccccCHHHHHHHHHHHHH-cCCcEEEEeccc
Q 025344 152 VMFNKSDIPSD-------RDRAFGAYVA--R-A---PR-------STEYVEDVDLLIRRAERCLE-AGADMIMIDSDD 208 (254)
Q Consensus 152 ~k~~~s~v~~~-------~d~~~~~~~~--~-~---~~-------~~~~~~d~~~~i~~~~~dLe-AGA~~ViiEarg 208 (254)
..+-..+-... .|+. .++. + . .| ..+...-.+.+++.++..++ .|+|=.-+.+=.
T Consensus 264 ~NH~~~~~~~~~~~~~~~~~~~--~~y~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d~~~~W~~e~gvDGfR~D~~~ 339 (657)
T 2wsk_A 264 LNHSAELDLDGPLFSLRGIDNR--SYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAA 339 (657)
T ss_dssp CSCCTTCSTTSBCCSHHHHHHH--HHBCBCTTSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTTCCCEEEETTTH
T ss_pred ecccccccccCccccccCCCCc--cceEECCCCCeeCCCCcCCcccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeccc
Confidence 63221100000 0000 0000 0 0 01 11111223677888888888 899988888753
No 486
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=52.87 E-value=16 Score=33.07 Aligned_cols=72 Identities=18% Similarity=0.174 Sum_probs=47.5
Q ss_pred cCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC--Ch----hHHHHHH---
Q 025344 66 LMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI--PE----ETLLRYV--- 136 (254)
Q Consensus 66 l~~~~~l~eKi~l~~~~gV~v~~Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i--~~----~~r~~lI--- 136 (254)
.-..+.|++.|+.++++||.|+. |. + --.+-++.++++|.++||+-.|...= +. .+..++.
T Consensus 138 ~~~~~~L~~~i~~L~~~GIrVSL--FI------D--pd~~qI~aA~~~GAd~IELhTG~YA~a~~~~~~~~el~rl~~aA 207 (278)
T 3gk0_A 138 VGHFDAVRAACKQLADAGVRVSL--FI------D--PDEAQIRAAHETGAPVIELHTGRYADAHDAAEQQREFERIATGV 207 (278)
T ss_dssp TTTHHHHHHHHHHHHHTTCEEEE--EE------C--SCHHHHHHHHHHTCSEEEECCHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHCCCEEEE--Ee------C--CCHHHHHHHHHhCcCEEEEecchhhccCCchhHHHHHHHHHHHH
Confidence 45567799999999999999884 11 2 22345778899999999997774421 11 2233333
Q ss_pred HHHHHcCCccc
Q 025344 137 RLVKSAGLKAK 147 (254)
Q Consensus 137 ~~~~~~G~~v~ 147 (254)
+.+.+.||.|-
T Consensus 208 ~~A~~lGL~Vn 218 (278)
T 3gk0_A 208 DAGIALGLKVN 218 (278)
T ss_dssp HHHHHTTCEEE
T ss_pred HHHHHcCCEEe
Confidence 33567777653
No 487
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=52.78 E-value=44 Score=27.61 Aligned_cols=109 Identities=10% Similarity=0.056 Sum_probs=56.7
Q ss_pred HHHHHHHhhccc-ccEEeecCcccc-cCChhHHHHHHHHHHhCCceecC-C---cHH--HHHHHhCCchHHHHHHHHHHc
Q 025344 42 VLEDIFESMGQF-VDGLKFSGGSHS-LMPKPFIEEVVKRAHQHDVYVST-G---DWA--EHLIRNGPSAFKEYVEDCKQV 113 (254)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GT~~-l~~~~~l~eKi~l~~~~gV~v~~-G---tl~--E~a~~qg~~~~~~yl~~~k~l 113 (254)
.+++.++.+.+. .|.+=+.+.... ......+++.-++++++|+.+.. + .|. +-...+.-+.+++.++.|+++
T Consensus 17 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~l 96 (281)
T 3u0h_A 17 SLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARL 96 (281)
T ss_dssp CHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEEecccccccCCCHHHHHHHHHHHHHHHHHHHc
Confidence 344555544443 566655543210 01123377777888888887653 2 232 111112112577888888888
Q ss_pred CCCEEEec--CCcccCChhHHHHHHHH-------HHHcCCccccee
Q 025344 114 GFDTIELN--VGSLEIPEETLLRYVRL-------VKSAGLKAKPKF 150 (254)
Q Consensus 114 GF~~IEIS--dGti~i~~~~r~~lI~~-------~~~~G~~v~~E~ 150 (254)
|.+.|-+. .+.-.-+.+.+.++++. +++.|+++.-|.
T Consensus 97 G~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 142 (281)
T 3u0h_A 97 GARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLGMRVGLEY 142 (281)
T ss_dssp TCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEEC
T ss_pred CCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 88888743 22222223455555543 345555555443
No 488
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=52.65 E-value=39 Score=31.04 Aligned_cols=25 Identities=16% Similarity=0.212 Sum_probs=20.6
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcc
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGSL 125 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti 125 (254)
+...+.++.+++.||++++|.-.+-
T Consensus 136 ~~~~~~i~~a~~aG~~al~vTvd~p 160 (380)
T 1p4c_A 136 EIAQGMVLKALHTGYTTLVLTTDVA 160 (380)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCS
T ss_pred HHHHHHHHHHHHcCCCEEEEeecCc
Confidence 4678899999999999999965443
No 489
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=52.62 E-value=16 Score=38.57 Aligned_cols=47 Identities=23% Similarity=0.249 Sum_probs=36.7
Q ss_pred HHHHHHcCCCEEEecCCccc--------------------------C-----ChhHHHHHHHHHHHcCCcccceeeee
Q 025344 107 VEDCKQVGFDTIELNVGSLE--------------------------I-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (254)
Q Consensus 107 l~~~k~lGF~~IEISdGti~--------------------------i-----~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (254)
+.++++||+++||++==+-. + +.++..++|+.+.++|++|+-.+-..
T Consensus 692 ldyLk~LGVtaIwL~Pi~~~~~~~~~~~~~~~~GYd~~d~~~~~~~i~~~~Gt~~efk~lV~alH~~GI~VIlDvV~N 769 (1039)
T 3klk_A 692 ADLFKSWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKAGLQAIADWVPD 769 (1039)
T ss_dssp HHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHcCCCEEEECccccCCcccccccCcCCCCCCcccccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 56889999999999643222 1 23689999999999999999877663
No 490
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=52.52 E-value=20 Score=31.93 Aligned_cols=45 Identities=16% Similarity=0.299 Sum_probs=39.1
Q ss_pred CchHHHHHHHHHHcCCC-EEEecCCcccCChhHHHHHHHHHHHcCCccc
Q 025344 100 PSAFKEYVEDCKQVGFD-TIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (254)
Q Consensus 100 ~~~~~~yl~~~k~lGF~-~IEISdGti~i~~~~r~~lI~~~~~~G~~v~ 147 (254)
+....+.+++|-+.|.. .|-++.|+ +.++..++.+.+++.|++++
T Consensus 81 ~~~~~~~v~ea~~~Gi~~vVi~t~G~---~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 81 APFAPDAVYEAVDAGIRLVVVITEGI---PVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp GGGHHHHHHHHHHTTCSEEEECCCCC---CHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHHHHHHHcCCEEE
Confidence 55789999999999999 77788886 77778899999999999776
No 491
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=52.41 E-value=88 Score=26.85 Aligned_cols=80 Identities=14% Similarity=0.251 Sum_probs=53.0
Q ss_pred cEEeec-CcccccCChhHHHHHHHHHHhCCceec--C-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----
Q 025344 55 DGLKFS-GGSHSLMPKPFIEEVVKRAHQHDVYVS--T-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE---- 126 (254)
Q Consensus 55 D~lKfg-~GT~~l~~~~~l~eKi~l~~~~gV~v~--~-Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~---- 126 (254)
+.+-|. +|--.++|. +.+.++.++++|+.+. | |++- +.+++||.+.|-||=-+.+
T Consensus 129 ~~i~~s~gGEPll~~~--l~~li~~~~~~g~~~~l~TNG~~~---------------~~l~~L~~~~v~isld~~~~~~~ 191 (311)
T 2z2u_A 129 KHVAISLSGEPTLYPY--LDELIKIFHKNGFTTFVVSNGILT---------------DVIEKIEPTQLYISLDAYDLDSY 191 (311)
T ss_dssp CEEEECSSSCGGGSTT--HHHHHHHHHHTTCEEEEEECSCCH---------------HHHHHCCCSEEEEECCCSSTTTC
T ss_pred CEEEEeCCcCccchhh--HHHHHHHHHHCCCcEEEECCCCCH---------------HHHHhCCCCEEEEEeecCCHHHH
Confidence 456786 587777664 9999999999997443 4 5541 1234558899999855431
Q ss_pred --------CChhHHHHHHHHHHHcCCcccceeee
Q 025344 127 --------IPEETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 127 --------i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
-+.+.-.+.|+.+++.| .+...+-+
T Consensus 192 ~~i~~~~~~~~~~v~~~i~~l~~~g-~v~i~~~~ 224 (311)
T 2z2u_A 192 RRICGGKKEYWESILNTLDILKEKK-RTCIRTTL 224 (311)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTSS-SEEEEEEE
T ss_pred HHHhCCccchHHHHHHHHHHHHhcC-CEEEEEEE
Confidence 13456677788888887 55444433
No 492
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=52.28 E-value=26 Score=32.03 Aligned_cols=72 Identities=17% Similarity=0.187 Sum_probs=49.3
Q ss_pred HHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccc
Q 025344 111 KQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (254)
Q Consensus 111 k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~ 179 (254)
.+.||++|=+|+.++ .++.++.+..++.+.+. .+ ..=+ --|-.++ |
T Consensus 56 e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~-~~---~~Pv---------iaD~d~G-y--------- 112 (318)
T 1zlp_A 56 EKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAA-AP---NLCV---------VVDGDTG-G--------- 112 (318)
T ss_dssp HHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHH-SS---SSEE---------EEECTTC-S---------
T ss_pred HHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhh-cc---CCCE---------EEeCCCC-C---------
Confidence 456999999988432 57888888888888773 10 0111 1111111 1
Q ss_pred cccCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 180 YVEDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 180 ~~~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
.++....+.+++.++|||.-|.||.-
T Consensus 113 --g~~~~v~~tv~~l~~aGaagv~iED~ 138 (318)
T 1zlp_A 113 --GGPLNVQRFIRELISAGAKGVFLEDQ 138 (318)
T ss_dssp --SSHHHHHHHHHHHHHTTCCEEEEECB
T ss_pred --CCHHHHHHHHHHHHHcCCcEEEECCC
Confidence 14888999999999999999999985
No 493
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=52.16 E-value=1.4e+02 Score=27.26 Aligned_cols=50 Identities=10% Similarity=0.001 Sum_probs=32.4
Q ss_pred cCChhHHHHHHHHHHhC-Cc----eecCC-cHHHHHHHhCCchHHHHHHHHHHcC-CCEEEecCCc
Q 025344 66 LMPKPFIEEVVKRAHQH-DV----YVSTG-DWAEHLIRNGPSAFKEYVEDCKQVG-FDTIELNVGS 124 (254)
Q Consensus 66 l~~~~~l~eKi~l~~~~-gV----~v~~G-tl~E~a~~qg~~~~~~yl~~~k~lG-F~~IEISdGt 124 (254)
..+.+.+.+.++-.++. ++ ++.|+ +.- .+.+..+.+.+.| .+.|-++|.+
T Consensus 175 ~~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~---------~~~~~a~~~~~~Gg~d~I~~~NT~ 231 (354)
T 4ef8_A 175 AYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFA---------HFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp GGSHHHHHHHHHHHHHHCCSCEEEEECCCCSHH---------HHHHHHHHHHTCTTEEEEEECCCE
T ss_pred ccCHHHHHHHHHHHHHhhCCCeEEEecCCCCHH---------HHHHHHHHHHhCCCccEEEEeccc
Confidence 34667788888877764 44 44455 211 3456666777887 9999887765
No 494
>2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} SCOP: c.6.2.5
Probab=52.10 E-value=1.2e+02 Score=26.78 Aligned_cols=126 Identities=17% Similarity=0.161 Sum_probs=83.4
Q ss_pred HHHHHHhCCc---eecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccccee
Q 025344 75 VVKRAHQHDV---YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (254)
Q Consensus 75 Ki~l~~~~gV---~v~~-Gtl~E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~ 150 (254)
.-.+++.+|. +|-| |-|.-.+. +++.-.+..++.++++.-+-+=+ -++. ..+++.+++.|+++..|+
T Consensus 94 L~a~a~~~G~~l~hVKPHGALYN~~~-~d~~~A~av~~av~~~d~~L~l~-----~l~g---s~~~~~A~~~Gl~~~~E~ 164 (250)
T 2dfa_A 94 LSAFLKAEGLPLHHVKPHGALYLKAC-RDRETARAIALAVKAFDPGLPLV-----VLPG---TVYEEEARKAGLRVVLEA 164 (250)
T ss_dssp HHHHHHHTTCCCCCBCCCHHHHHHHH-HCHHHHHHHHHHHHHHCTTCCEE-----ECTT---SHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHcCCEeEEeccCHHHHHHHh-hCHHHHHHHHHHHHHhCCCcEEE-----ecCC---hHHHHHHHHcCCcEEEEE
Confidence 4467889998 6668 66665553 44457888899999874332111 1222 247889999999999999
Q ss_pred eeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcCC------cEEEEecccccccCCCccH
Q 025344 151 AVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGA------DMIMIDSDDVCKHADSLRA 218 (254)
Q Consensus 151 g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAGA------~~ViiEargi~d~~g~~r~ 218 (254)
---..- ..| ..|.|......-..|+++.++++.+-+..|. ..|-++++-||=.-.+...
T Consensus 165 FADR~Y-----~~d----G~LvpR~~~gAvi~d~~~~~~rv~~m~~~g~V~t~~G~~i~i~adTiCvHGD~p~A 229 (250)
T 2dfa_A 165 FPERAY-----LRS----GQLAPRSMPGSWITDPEEAARRALRMVLEGKVEALDGGEVAVRADTLCIHGDNPNA 229 (250)
T ss_dssp CTTBCB-----CTT----SSBCCTTSTTCBCCCHHHHHHHHHHHHHTSEEEBTTSSEEECCCSEEEEC---CCH
T ss_pred eecccc-----CCC----CCEecCCCCCCccCCHHHHHHHHHHHHHCCCEEecCCCEeeccCCEEEECCCCHHH
Confidence 774332 122 1266666655556799999999999999987 3566666777766555444
No 495
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=52.04 E-value=13 Score=34.24 Aligned_cols=120 Identities=13% Similarity=0.032 Sum_probs=65.2
Q ss_pred HHHHHHHHHHh------CCceecCCcHHHHHHHhCCc---hHHHHHHHHHHcCCCEEEecCCcccCChh-HHHHHHHHHH
Q 025344 71 FIEEVVKRAHQ------HDVYVSTGDWAEHLIRNGPS---AFKEYVEDCKQVGFDTIELNVGSLEIPEE-TLLRYVRLVK 140 (254)
Q Consensus 71 ~l~eKi~l~~~------~gV~v~~Gtl~E~a~~qg~~---~~~~yl~~~k~lGF~~IEISdGti~i~~~-~r~~lI~~~~ 140 (254)
.+.|.++-.++ -+|+++++.|+.-. .+.. ...++.+.+.+.|.++|+||.|+..-... .-.++++.++
T Consensus 218 ~~~eiv~aVr~avg~~~v~vrls~~~~~~~~--~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik 295 (377)
T 2r14_A 218 FPLEVVDAVAEVFGPERVGIRLTPFLELFGL--TDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMR 295 (377)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCCTTC--CCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcEEEEeccccccCCC--CCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHH
Confidence 35555555544 34566665443210 0111 24456677778899999999987421110 0134566666
Q ss_pred HcCCcccceeeeecCCCCCCCccccccccccccCCCccccccCHHHHHHHHHHHHHcC-CcEEEEecccccccCCCccHH
Q 025344 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRAD 219 (254)
Q Consensus 141 ~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~~d~~~~i~~~~~dLeAG-A~~ViiEargi~d~~g~~r~d 219 (254)
+. +.+. .--. + . + + .+.+++.|++| ||.|++ +|+++.+ ++
T Consensus 296 ~~-------~~iP--vi~~---G-----g-i-----------~----~~~a~~~l~~g~aD~V~i-gR~~l~~-----P~ 336 (377)
T 2r14_A 296 QR-------FKGG--LIYC---G-----N-Y-----------D----AGRAQARLDDNTADAVAF-GRPFIAN-----PD 336 (377)
T ss_dssp HH-------CCSE--EEEE---S-----S-C-----------C----HHHHHHHHHTTSCSEEEE-SHHHHHC-----TT
T ss_pred HH-------CCCC--EEEE---C-----C-C-----------C----HHHHHHHHHCCCceEEee-cHHHHhC-----ch
Confidence 52 2220 0000 0 1 1 1 67788889998 999998 6665532 56
Q ss_pred HHHHHHhccCCC
Q 025344 220 IIAKVIGRLGLE 231 (254)
Q Consensus 220 ~i~~ii~~l~~~ 231 (254)
++.++.+..++.
T Consensus 337 l~~k~~~g~~l~ 348 (377)
T 2r14_A 337 LPERFRLGAALN 348 (377)
T ss_dssp HHHHHHHTCCCC
T ss_pred HHHHHHcCCCCC
Confidence 778887665543
No 496
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=51.98 E-value=14 Score=32.30 Aligned_cols=66 Identities=18% Similarity=0.087 Sum_probs=44.0
Q ss_pred chHHHHHHHHHH-c--CCCEEEecCCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCC
Q 025344 101 SAFKEYVEDCKQ-V--GFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (254)
Q Consensus 101 ~~~~~yl~~~k~-l--GF~~IEISdGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~ 175 (254)
+.+..|.+.+.+ + ||=..+. .|.- .-.++|+++++. ...+.-.+|++
T Consensus 149 e~~~~~a~~g~~~l~~~~Vyl~~-~G~~-----~~~~~i~~i~~~~~~~Pv~vGgGI~---------------------- 200 (234)
T 2f6u_A 149 ELAASYALVGEKLFNLPIIYIEY-SGTY-----GNPELVAEVKKVLDKARLFYGGGID---------------------- 200 (234)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEC-TTSC-----CCHHHHHHHHHHCSSSEEEEESCCC----------------------
T ss_pred HHHHHHHHhhhhhcCCCEEEEeC-CCCc-----chHHHHHHHHHhCCCCCEEEEecCC----------------------
Confidence 458888888874 4 6666666 5641 124677777765 45566666662
Q ss_pred CccccccCHHHHHHHHHHHHHcCCcEEEEec
Q 025344 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (254)
Q Consensus 176 ~~~~~~~d~~~~i~~~~~dLeAGA~~ViiEa 206 (254)
+ .+++++.++ |||.|||=+
T Consensus 201 -------s----~e~a~~~~~-gAd~VIVGS 219 (234)
T 2f6u_A 201 -------S----REKAREMLR-YADTIIVGN 219 (234)
T ss_dssp -------S----HHHHHHHHH-HSSEEEECH
T ss_pred -------C----HHHHHHHHh-CCCEEEECh
Confidence 1 566777788 999999843
No 497
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=51.94 E-value=20 Score=33.76 Aligned_cols=48 Identities=15% Similarity=0.159 Sum_probs=20.3
Q ss_pred HHHHHHHHHcCCCEEEecCC----cccCChhHHHHHHHHHHHcCCcccceee
Q 025344 104 KEYVEDCKQVGFDTIELNVG----SLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (254)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdG----ti~i~~~~r~~lI~~~~~~G~~v~~E~g 151 (254)
++.++.++++||++|-|.-+ ...=+.+...++|+.|.++|++|+-+++
T Consensus 42 ~~di~~ik~~G~N~VRipv~~g~~~~~~~l~~ld~vv~~a~~~Gl~VIlDlH 93 (464)
T 1wky_A 42 TTAIEGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLAEDNNLVAVLEVH 93 (464)
T ss_dssp HHHHHHHHTTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHCCCCEEEEEcCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 34444455555555544211 0111223334455555555555554443
No 498
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=51.93 E-value=22 Score=31.20 Aligned_cols=52 Identities=13% Similarity=0.020 Sum_probs=39.3
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---------ccCC---hhHHHHHHHHHHHcCCcccceeee
Q 025344 101 SAFKEYVEDCKQVGFDTIELNVGS---------LEIP---EETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---------i~i~---~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
...++.++.++++||++|-|+-+. -.++ .+...++|+.++++|++|+-.+.-
T Consensus 36 ~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~ 99 (341)
T 1vjz_A 36 NFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHR 99 (341)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 357889999999999999996221 1121 233468999999999999988876
No 499
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=51.89 E-value=26 Score=30.61 Aligned_cols=51 Identities=18% Similarity=0.152 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---------ccCC---hhHHHHHHHHHHHcCCcccceeee
Q 025344 102 AFKEYVEDCKQVGFDTIELNVGS---------LEIP---EETLLRYVRLVKSAGLKAKPKFAV 152 (254)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---------i~i~---~~~r~~lI~~~~~~G~~v~~E~g~ 152 (254)
-.++-++.++++||++|-|+-+. -.++ .+...++|+.++++|++|+-.+.-
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 34778899999999999986321 1122 233468899999999999988877
No 500
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=51.68 E-value=28 Score=30.96 Aligned_cols=71 Identities=18% Similarity=0.267 Sum_probs=47.1
Q ss_pred HcCCCEEEecCCc----------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCccccc
Q 025344 112 QVGFDTIELNVGS----------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (254)
Q Consensus 112 ~lGF~~IEISdGt----------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~s~v~~~~d~~~~~~~~~~~~~~~~~ 181 (254)
+.||++|=+|+.+ ..++.++.+..++.+.+. .. +| +-+ |-.+| | -
T Consensus 34 ~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~-~~-~p-via-----------D~d~G-y----------g 88 (275)
T 2ze3_A 34 AAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRA-VA-IP-VNA-----------DIEAG-Y----------G 88 (275)
T ss_dssp HHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHH-CS-SC-EEE-----------ECTTC-S----------S
T ss_pred HcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhh-cC-CC-EEe-----------ecCCC-C----------C
Confidence 4589999998532 357888888888887763 11 12 111 11111 1 1
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEecc
Q 025344 182 EDVDLLIRRAERCLEAGADMIMIDSD 207 (254)
Q Consensus 182 ~d~~~~i~~~~~dLeAGA~~ViiEar 207 (254)
.++++..+.+++.++|||.-|.||.-
T Consensus 89 ~~~~~~~~~v~~l~~aGaagv~iED~ 114 (275)
T 2ze3_A 89 HAPEDVRRTVEHFAALGVAGVNLEDA 114 (275)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECB
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCC
Confidence 14788899999999999999999974
Done!