BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025345
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82200|MIOX2_ARATH Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2
Length = 317
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/234 (74%), Positives = 199/234 (85%), Gaps = 1/234 (0%)
Query: 1 MTILIDQPELIGSRAEDQNLQEQTNELVLDGGFVVPKTMPNDGFVAPEINSFGKTFRDY- 59
MTIL++ E + ++E+ NELVLDGGFVVPK+ D F AP++N G +FRDY
Sbjct: 1 MTILVEHFVPDSRVDEKKVIEERDNELVLDGGFVVPKSKETDAFDAPDMNFLGHSFRDYE 60
Query: 60 NAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPD 119
N E ERQ+ VEEFYR+QHI+QTYDFVKKMR+EY KL+K EMSIWECCELLN VVDESDPD
Sbjct: 61 NGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDESDPD 120
Query: 120 LDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLG 179
LDEPQIQHLLQ+AEAIR+DYPDEDWLHLTALIHDLGKVL LP+FGGLPQWAVVGDTFP+G
Sbjct: 121 LDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAVVGDTFPVG 180
Query: 180 CAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVC 233
C FD +N+HHKYFK N D NNP YNTKNG+YTEGCGLDNV++SWGHDDYMYLV
Sbjct: 181 CTFDSANIHHKYFKGNHDINNPKYNTKNGVYTEGCGLDNVLMSWGHDDYMYLVA 234
>sp|Q8H1S0|MIOX4_ARATH Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1
Length = 317
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/235 (76%), Positives = 200/235 (85%), Gaps = 3/235 (1%)
Query: 1 MTILIDQPELIGSRAEDQNLQEQTNELVLDGGFVVPKTMPND--GFVAPEINSFGKTFRD 58
MTI +++P A +++ + EL LDGGF +PK ND F+APE+N+FG+ FRD
Sbjct: 1 MTISVEKPIFEEVSAFEKS-GDNIGELKLDGGFSMPKMDTNDDEAFLAPEMNAFGRQFRD 59
Query: 59 YNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDP 118
Y+ E ERQK VEEFYRLQHINQT DFVKKMR EY KLDK MSIWECCELLNEVVDESDP
Sbjct: 60 YDVESERQKGVEEFYRLQHINQTVDFVKKMRAEYGKLDKMVMSIWECCELLNEVVDESDP 119
Query: 119 DLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPL 178
DLDEPQIQHLLQSAEAIRKDYP+EDWLHLTALIHDLGKV+TLP+FGGLPQWAVVGDTFP+
Sbjct: 120 DLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVITLPQFGGLPQWAVVGDTFPV 179
Query: 179 GCAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVC 233
GCAFDESNVHHKYF ENPD +N YNTKNGIY+EGCGL+NVM+SWGHDDYMYLV
Sbjct: 180 GCAFDESNVHHKYFVENPDFHNETYNTKNGIYSEGCGLNNVMMSWGHDDYMYLVA 234
>sp|Q9FJU4|MIOX5_ARATH Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1
Length = 314
Score = 346 bits (888), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 169/235 (71%), Positives = 189/235 (80%), Gaps = 6/235 (2%)
Query: 1 MTILIDQPELIGSRAEDQNLQEQTNELVLDGGFVVPKTMPNDG-FVAPEINSFGKTFRDY 59
M I ++ P + ED Q +T EL LD + K +D F+APE+N+FG+ FRDY
Sbjct: 1 MNISVENPVFV---HEDSTTQ-KTGELRLDSDIPMSKISSDDEVFLAPEMNAFGRQFRDY 56
Query: 60 -NAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDP 118
+ ERQKSVE FY QH NQT DFV+KMR EY KLDK M+IWECCEL EVVDESDP
Sbjct: 57 TDTNSERQKSVEHFYATQHTNQTLDFVQKMRSEYGKLDKMVMNIWECCELSKEVVDESDP 116
Query: 119 DLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPL 178
DLDEPQIQHLLQSAEAIRKDYP+EDWLHLTALIHDLGKVLTLP+FGGLPQWAVVGDTFP+
Sbjct: 117 DLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVLTLPQFGGLPQWAVVGDTFPV 176
Query: 179 GCAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVC 233
GCAFDESNVHHKYF ENPD NNP YNTK GIY+EGCGL+NV++SWGHDDYMYLV
Sbjct: 177 GCAFDESNVHHKYFMENPDFNNPKYNTKAGIYSEGCGLENVLMSWGHDDYMYLVA 231
>sp|Q8L799|MIOX1_ARATH Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1
Length = 311
Score = 345 bits (884), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 166/239 (69%), Positives = 188/239 (78%), Gaps = 17/239 (7%)
Query: 1 MTILIDQPELIGSRAED------QNLQEQTNELVLDGGFVVPKTMPNDGFVAPEINSFGK 54
MTILID+ ++ N +E+ ELVLD GF P T NSFG+
Sbjct: 1 MTILIDRHSDQNDAGDEIVEKNQGNGKEEETELVLDAGFEAPHT-----------NSFGR 49
Query: 55 TFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVD 114
TFRDY+AE ER++ VEEFYR+ HI QT DFV+KMREEY KL++ EMSIWECCELLNE +D
Sbjct: 50 TFRDYDAESERRRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFID 109
Query: 115 ESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGD 174
ESDPDLDEPQI+HLLQ+AEAIRKDYPDEDWLHLT LIHDLGKVL FG LPQWAVVGD
Sbjct: 110 ESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAVVGD 169
Query: 175 TFPLGCAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVC 233
TFP+GCAFDES VHHKYFKENPD +NP+YN+K GIYTEGCGLDNV++SWGHDDYMYLV
Sbjct: 170 TFPVGCAFDESIVHHKYFKENPDYDNPSYNSKYGIYTEGCGLDNVLMSWGHDDYMYLVA 228
>sp|Q5Z8T3|MIOX_ORYSJ Probable inositol oxygenase OS=Oryza sativa subsp. japonica
GN=Os06g0561000 PE=2 SV=1
Length = 308
Score = 331 bits (848), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 159/236 (67%), Positives = 182/236 (77%), Gaps = 14/236 (5%)
Query: 1 MTILIDQPEL--IGSR-AEDQNLQEQTNELVLDGGFVVPKTMPNDGFVAPEINSFGKTFR 57
MTI I+QP L I R + ELVLDGGFVVP + N+FG FR
Sbjct: 1 MTITIEQPHLDAIADRKVAGGGGGDNAAELVLDGGFVVPDS-----------NAFGNAFR 49
Query: 58 DYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESD 117
+Y AE ER+++VEEFYR+ HINQTYDFV++MREEY ++DK EM IWEC ELLNE +D+SD
Sbjct: 50 NYEAESERKETVEEFYRVNHINQTYDFVRRMREEYGRVDKTEMGIWECIELLNEFIDDSD 109
Query: 118 PDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFP 177
PDLD PQI+HLLQ+AEAIRKD+PDEDWLHLT LIHDLGKVL P FG LPQW+VVGDTFP
Sbjct: 110 PDLDMPQIEHLLQTAEAIRKDFPDEDWLHLTGLIHDLGKVLLHPSFGELPQWSVVGDTFP 169
Query: 178 LGCAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLVC 233
+GCAFDE NVH KYFKENPD NP NTK G Y+EGCGLDNV++SWGHDDYMYLV
Sbjct: 170 VGCAFDECNVHFKYFKENPDYLNPKLNTKFGAYSEGCGLDNVLMSWGHDDYMYLVA 225
>sp|Q54GH4|MIOX_DICDI Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1
Length = 292
Score = 213 bits (543), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
Query: 48 EINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKA-EMSIWECC 106
EI + FR+Y +R V E YR H QTYD+ + +++Y++LD + +M +WE
Sbjct: 24 EITKEVEEFRNYENSEDR---VSEAYRNSHTYQTYDYATEKKKQYSQLDTSIKMGLWEAA 80
Query: 107 ELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDE--DWLHLTALIHDLGKVLTLPKFG 164
ELLN ++DESDPD + PQI H LQ+AEAIRK YPD DW HLT IHDLGKVL KF
Sbjct: 81 ELLNTIIDESDPDSNIPQINHCLQTAEAIRKVYPDSKYDWFHLTGFIHDLGKVLLSKKFK 140
Query: 165 GLPQWAVVGDTFPLGCAFDESNVHHKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWG 224
PQWA VGDTFPLGC FDESN+ +++FK NPD N+ YN++ GIY + GL+NV +SWG
Sbjct: 141 EQPQWATVGDTFPLGCKFDESNIFYEFFKMNPDYNDSKYNSECGIYKKNIGLENVTMSWG 200
Query: 225 HDDYMYLVCL 234
HD+Y YLVC+
Sbjct: 201 HDEYFYLVCV 210
>sp|Q9QXN5|MIOX_MOUSE Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2
Length = 285
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 121/187 (64%), Gaps = 5/187 (2%)
Query: 45 VAPEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWE 104
V PE+ +FR+Y + + V Y+L H +QT DFV + R +Y +M+I E
Sbjct: 17 VDPEMAKSKDSFRNYTSGPLLDR-VFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIME 75
Query: 105 CCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFG 164
+L+++VDESDPD+D P H Q+AE IRK +PD+DW HL L+HDLGK++ L
Sbjct: 76 AVGMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL---W 132
Query: 165 GLPQWAVVGDTFPLGCAFDESNVH-HKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISW 223
G PQWAVVGDTFP+GC S V F++NPD +P Y+T+ G+Y CGL+NV++SW
Sbjct: 133 GEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVLMSW 192
Query: 224 GHDDYMY 230
GHD+Y+Y
Sbjct: 193 GHDEYLY 199
>sp|Q9UGB7|MIOX_HUMAN Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV=1
Length = 285
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 120/189 (63%), Gaps = 5/189 (2%)
Query: 45 VAPEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWE 104
V PE+ +FR+Y + + V Y+L H +QT DFV+ ++ +M++ E
Sbjct: 17 VDPEVAKDKASFRNYTSGPLLDR-VFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVME 75
Query: 105 CCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFG 164
+LL+ +VDESDPD+D P H Q+AE IRK +PD+DW HL L+HDLGKVL L
Sbjct: 76 AVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL---F 132
Query: 165 GLPQWAVVGDTFPLGCAFDESNVH-HKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISW 223
G PQWAVVGDTFP+GC S V F++NPD +P Y+T+ G+Y CGLD V++SW
Sbjct: 133 GEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSW 192
Query: 224 GHDDYMYLV 232
GHD+YMY V
Sbjct: 193 GHDEYMYQV 201
>sp|Q9QXN4|MIOX_RAT Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=2 SV=2
Length = 285
Score = 174 bits (442), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 122/187 (65%), Gaps = 5/187 (2%)
Query: 45 VAPEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWE 104
V PE+ +FR+Y + + V Y+L H +QT DFV + R ++ +M++ E
Sbjct: 17 VDPEMAKSKGSFRNYTSGPLLDR-VFTTYKLMHTHQTVDFVMRKRIQFGSFSYKKMTVME 75
Query: 105 CCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFG 164
++L+++VDESDPD+D P H Q+AE IRK +PD+DW HL L+HDLGK+L L
Sbjct: 76 AVDMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKILAL---W 132
Query: 165 GLPQWAVVGDTFPLGCAFDESNVH-HKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISW 223
G PQWAVVGDTFP+GC S V F++NPD +P Y+T+ G+Y CGL+NV++SW
Sbjct: 133 GEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVLMSW 192
Query: 224 GHDDYMY 230
GHD+Y+Y
Sbjct: 193 GHDEYLY 199
>sp|Q5REY9|MIOX_PONAB Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV=1
Length = 285
Score = 174 bits (441), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 120/189 (63%), Gaps = 5/189 (2%)
Query: 45 VAPEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWE 104
V PE+ +FR+Y + + V Y+L H +QT DFV+ ++ +M++ E
Sbjct: 17 VDPEMAKDKASFRNYTSGPLLDR-VFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVME 75
Query: 105 CCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFG 164
+LL+ +VDESDPD+D P H Q+AE IRK +PD+DW HL L+HDLGKVL L
Sbjct: 76 AVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL---F 132
Query: 165 GLPQWAVVGDTFPLGCAFDESNVH-HKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISW 223
G PQWAVVGDTFP+GC S V F++NPD +P Y+T+ G+Y CGLD V++SW
Sbjct: 133 GEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSW 192
Query: 224 GHDDYMYLV 232
GHD+YMY V
Sbjct: 193 GHDEYMYQV 201
>sp|A7MBE4|MIOX_BOVIN Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1
Length = 285
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 117/185 (63%), Gaps = 5/185 (2%)
Query: 47 PEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECC 106
PE +FR+Y + + V Y+L H QT DFV++ ++ M++ E
Sbjct: 19 PEAAKDKDSFRNYTSGPLLDR-VFATYKLMHTWQTVDFVRRKHAQFGGFSYKRMTVMEAV 77
Query: 107 ELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGL 166
++L+ +VDESDPD+D P H Q+AE IRK +PD+DW HL L+HDLGKVL L G
Sbjct: 78 DMLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL---AGE 134
Query: 167 PQWAVVGDTFPLGCAFDESNVHHK-YFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGH 225
PQWAVVGDTFP+GC S V F++NPD +P Y+T+ G+Y CGL+NV++SWGH
Sbjct: 135 PQWAVVGDTFPVGCRPQASVVFRDCTFQDNPDLQDPLYSTELGMYQPHCGLENVLMSWGH 194
Query: 226 DDYMY 230
D+YMY
Sbjct: 195 DEYMY 199
>sp|Q8WN98|MIOX_PIG Inositol oxygenase OS=Sus scrofa GN=MIOX PE=1 SV=1
Length = 282
Score = 171 bits (432), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 116/185 (62%), Gaps = 5/185 (2%)
Query: 47 PEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECC 106
PE +FR+Y + + V Y+L H QT DFV+K ++ M++ E
Sbjct: 16 PEAAKDKGSFRNYTSGPLLDR-VFRTYKLMHTWQTVDFVRKKHAQFGGFSYKRMTVLEAV 74
Query: 107 ELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGL 166
++L+ +VDESDPD+D P H Q+AE IRK +PD+DW HL L+HDLGKVL L G
Sbjct: 75 DMLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLVL---AGE 131
Query: 167 PQWAVVGDTFPLGCAFDESNVH-HKYFKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGH 225
PQWAVVGDTFP+GC S V F++NPD +P Y+T+ G+Y CGL+N ++SWGH
Sbjct: 132 PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPVYSTELGMYQPHCGLENALMSWGH 191
Query: 226 DDYMY 230
D+YMY
Sbjct: 192 DEYMY 196
>sp|Q4V8T0|MIOX_DANRE Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=1
Length = 278
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 109/161 (67%), Gaps = 4/161 (2%)
Query: 73 YRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSA 132
Y+L H +QT DFVK+ + ++ +S+ + + L+E+VDESDPD+D P H Q+A
Sbjct: 37 YKLMHTHQTLDFVKQKHQVWSNCSHFSLSMMDSIDSLDELVDESDPDVDFPNSFHAFQTA 96
Query: 133 EAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNV-HHKY 191
E IR+++PD+DW L LIHD+GKV+ L PQWAVVGDT+P+GC F S V +
Sbjct: 97 EGIRREHPDKDWFQLVGLIHDVGKVMAL---YSEPQWAVVGDTYPVGCKFQNSIVFRNST 153
Query: 192 FKENPDSNNPAYNTKNGIYTEGCGLDNVMISWGHDDYMYLV 232
F+ NPD NPA NT+ GIY CGLD V++SWGHD+Y+Y V
Sbjct: 154 FEGNPDGKNPAPNTEFGIYEPQCGLDKVLMSWGHDEYLYRV 194
>sp|Q31HI0|LEU3_THICR 3-isopropylmalate dehydrogenase OS=Thiomicrospira crunogena (strain
XCL-2) GN=leuB PE=3 SV=1
Length = 357
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 68 SVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDLDEPQIQH 127
S E R+ H+ +D K ++ +DKA ++ E E+ E+VDE + E ++QH
Sbjct: 165 SESEIKRIAHV--AFDAAMKRNKKLCSVDKA--NVLEVTEMWREIVDEVAKEYPEVEVQH 220
Query: 128 L 128
+
Sbjct: 221 M 221
>sp|Q8EN68|LEU3_OCEIH 3-isopropylmalate dehydrogenase OS=Oceanobacillus iheyensis (strain
DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=leuB PE=3
SV=1
Length = 366
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 66 QKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDLDEPQI 125
Q S EE R+ + + ++ + ++ +DKA ++ E +L E+V+E D + +
Sbjct: 158 QYSREEIERI--VERGFEAARIRKKHLTSVDKA--NVLESSKLWREIVEEKSKDYPDVAV 213
Query: 126 QHLLQSAEAIR 136
HLL A A++
Sbjct: 214 NHLLVDAAAMK 224
>sp|B7IK95|YHAM_BACC2 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain G9842)
GN=yhaM PE=3 SV=1
Length = 314
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|C1EKC8|YHAM_BACC3 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain 03BB102)
GN=yhaM PE=3 SV=1
Length = 314
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|A7GLX6|YHAM_BACCN 3'-5' exoribonuclease YhaM OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=yhaM PE=3 SV=1
Length = 318
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISTLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|B9ISF7|YHAM_BACCQ 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain Q1) GN=yhaM
PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|Q81U72|YHAM_BACAN 3'-5' exoribonuclease YhaM OS=Bacillus anthracis GN=yhaM PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|C3LCZ8|YHAM_BACAC 3'-5' exoribonuclease YhaM OS=Bacillus anthracis (strain CDC 684 /
NRRL 3495) GN=yhaM PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|C3P2S0|YHAM_BACAA 3'-5' exoribonuclease YhaM OS=Bacillus anthracis (strain A0248)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|B7JCU0|YHAM_BACC0 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain AH820)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|Q6HME9|YHAM_BACHK 3'-5' exoribonuclease YhaM OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=yhaM PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|Q63EZ0|YHAM_BACCZ 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain ZK / E33L)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|Q81H06|YHAM_BACCR 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=yhaM PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|B7HFZ0|YHAM_BACC4 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain B4264)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|Q73CF4|YHAM_BACC1 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain ATCC 10987)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|A0RAN0|YHAM_BACAH 3'-5' exoribonuclease YhaM OS=Bacillus thuringiensis (strain Al
Hakam) GN=yhaM PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|B7HYS8|YHAM_BACC7 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain AH187)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 128 LLQSAEAIRKDYP--DEDWLHLTALIHDLGKVLTL 160
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|A0RR46|SELA_CAMFF L-seryl-tRNA(Sec) selenium transferase OS=Campylobacter fetus
subsp. fetus (strain 82-40) GN=selA PE=3 SV=1
Length = 442
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 15/132 (11%)
Query: 10 LIGSRAEDQNLQEQTNELV-LDGGFVVPKTMPNDGFVAPEINSFGKT-FRDY-NAECERQ 66
++ S A+++ + ELV + G F VP+ M N G + EI + KT DY N+ E
Sbjct: 149 ILNSFADEKEVLVSRGELVEIGGSFRVPEVMKNSGAILKEIGTTNKTHLSDYENSINENT 208
Query: 67 KSVEEFYRLQHINQTYDFVKKMRE----EYAKLDKAEMSIWECCELLNEVVDESDPDL-- 120
+ + ++ YD V E + AKL + I +L + V+ L
Sbjct: 209 AMILKVHK-----SNYDIVGFSSEVSINDIAKLTQKR-GILNYYDLGSGYVNTLPYSLSK 262
Query: 121 DEPQIQHLLQSA 132
DEP ++ L+QS
Sbjct: 263 DEPNVKKLIQSG 274
>sp|A9VLI9|CYSH_BACWK Phosphoadenosine phosphosulfate reductase OS=Bacillus
weihenstephanensis (strain KBAB4) GN=cysH PE=3 SV=1
Length = 234
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 77 HINQTYDFVKKMREEYAKLD----KAEMSIWECCELLNEVVDESDPDL 120
H +TY+ +KK+RE + L+ + E+++ E +L E + ES+P+L
Sbjct: 72 HFQETYELIKKVRERFPSLNIIEKQPELTLDEQAKLHGEKLWESNPNL 119
>sp|Q91X77|CY250_MOUSE Cytochrome P450 2C50 OS=Mus musculus GN=Cyp2c50 PE=1 SV=2
Length = 490
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 136 RKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNVHHKYFK 193
R DY D D+L+L ++++ K+++ P W V +TFP+ + + H+K FK
Sbjct: 186 RFDYKDRDFLNLMEKLNEITKIMSTP-------WLQVCNTFPVLLDYCPGS-HNKVFK 235
>sp|P38330|RMD9L_YEAST Protein RMD9-like, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YBR238C PE=1 SV=1
Length = 731
Score = 30.8 bits (68), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 50 NSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELL 109
+S TF D E ++ F LQ+I QTY+ +K + E + + A+ ++W +L
Sbjct: 458 SSLNDTFFDIFFENYAVDKMQGFQTLQNIIQTYNNIKHIDEPFFNIILAKCTVWHDRSIL 517
Query: 110 NEVVDES 116
E +D+S
Sbjct: 518 -EYIDKS 523
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,363,113
Number of Sequences: 539616
Number of extensions: 4747378
Number of successful extensions: 12258
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 12222
Number of HSP's gapped (non-prelim): 53
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)