BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025346
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8XIU8|ERA_CLOPE GTPase Era OS=Clostridium perfringens (strain 13 / Type A) GN=era
PE=3 SV=1
Length = 296
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 90/137 (65%), Gaps = 3/137 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIVEQLKNQ--KAPVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEV 250
NK D P ++AK LE+
Sbjct: 120 NKVDESSPEKVAKTLEL 136
>sp|Q0TNU5|ERA_CLOP1 GTPase Era OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=era PE=3 SV=1
Length = 296
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 90/137 (65%), Gaps = 3/137 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGEDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQLKNQ--KAPVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEV 250
NK D P ++AK LE+
Sbjct: 120 NKVDESSPEKVAKTLEL 136
>sp|Q0SRG1|ERA_CLOPS GTPase Era OS=Clostridium perfringens (strain SM101 / Type A)
GN=era PE=3 SV=1
Length = 296
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 90/137 (65%), Gaps = 3/137 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQLKNQ--KAPVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEV 250
NK D P ++AK LE+
Sbjct: 120 NKVDESSPEKVAKTLEL 136
>sp|B3ETC6|ERA_AMOA5 GTPase Era OS=Amoebophilus asiaticus (strain 5a2) GN=era PE=3 SV=1
Length = 296
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 89/129 (68%), Gaps = 9/129 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H++G+V ++GKPNVGKSTL N+++G++LSI+T K QTTRH I GI S ++Q+I DTPG
Sbjct: 6 HQAGFVTIIGKPNVGKSTLMNRLVGERLSIITPKAQTTRHSICGIVSDTDFQIIFTDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDA--CKAPERIDEILEEGVGDHKDKLPIL 230
I+ K + L MM ++ A ++ D ++ LVD + P ++++L +G ++P+L
Sbjct: 66 IL-KPAYELQESMMHMLQHALVDTDVLLWLVDIKEKEVPPIVEKVLAQG------RIPVL 118
Query: 231 LVLNKKDLI 239
L++NK DLI
Sbjct: 119 LLINKIDLI 127
>sp|B0TAF1|ERA_HELMI GTPase Era OS=Heliobacterium modesticaldum (strain ATCC 51547 /
Ice1) GN=era PE=3 SV=1
Length = 299
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 90/135 (66%), Gaps = 3/135 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+++++G+PNVGKSTL NQ+IG+K++I+++KPQTTR+RI+G+ + P+ Q I DTPGI
Sbjct: 5 RSGFISIIGRPNVGKSTLMNQLIGKKVAIMSDKPQTTRNRIVGVLNAPKGQAIFLDTPGI 64
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L +M+ R D I+ +VDA + P ++ + + + D K P+ LV+
Sbjct: 65 HKPK-HKLGEIMVTTARKTLGEVDLILYVVDASEEPGGGEQFISQMLKDIKT--PVFLVV 121
Query: 234 NKKDLIKPGEIAKKL 248
NK D + E KK+
Sbjct: 122 NKMDTVSREEGLKKI 136
>sp|Q2YT12|ERA_STAAB GTPase Era OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=era PE=3 SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|P64086|ERA_STAAW GTPase Era OS=Staphylococcus aureus (strain MW2) GN=era PE=3 SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|A8Z4A6|ERA_STAAT GTPase Era OS=Staphylococcus aureus (strain USA300 / TCH1516)
GN=era PE=3 SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|Q6G900|ERA_STAAS GTPase Era OS=Staphylococcus aureus (strain MSSA476) GN=era PE=3
SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|Q6GGD3|ERA_STAAR GTPase Era OS=Staphylococcus aureus (strain MRSA252) GN=era PE=3
SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|P64085|ERA_STAAN GTPase Era OS=Staphylococcus aureus (strain N315) GN=era PE=1 SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|P64084|ERA_STAAM GTPase Era OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=era PE=1 SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|A6QHB0|ERA_STAAE GTPase Era OS=Staphylococcus aureus (strain Newman) GN=era PE=3
SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|Q5HFJ3|ERA_STAAC GTPase Era OS=Staphylococcus aureus (strain COL) GN=era PE=3 SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|A5IT95|ERA_STAA9 GTPase Era OS=Staphylococcus aureus (strain JH9) GN=era PE=3 SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|Q2FGF6|ERA_STAA3 GTPase Era OS=Staphylococcus aureus (strain USA300) GN=era PE=3
SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|A6U239|ERA_STAA2 GTPase Era OS=Staphylococcus aureus (strain JH1) GN=era PE=3 SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|A7X2W5|ERA_STAA1 GTPase Era OS=Staphylococcus aureus (strain Mu3 / ATCC 700698)
GN=era PE=3 SV=1
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV--KTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|Q2FY06|ERA_STAA8 GTPase Era OS=Staphylococcus aureus (strain NCTC 8325) GN=era PE=3
SV=2
Length = 299
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKN--VKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ K+E
Sbjct: 121 LNKIDLVHPDELMPKIE 137
>sp|B2TMB9|ERA_CLOBB GTPase Era OS=Clostridium botulinum (strain Eklund 17B / Type B)
GN=era PE=3 SV=1
Length = 295
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 89/137 (64%), Gaps = 3/137 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGEDYQIVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKDSTNDVDLVLFLTNPDEEIGKGDKFILESLKDK--KCPVYLVL 119
Query: 234 NKKDLIKPGEIAKKLEV 250
NK D P +AK LE+
Sbjct: 120 NKIDESTPERVAKSLEM 136
>sp|B2V2K0|ERA_CLOBA GTPase Era OS=Clostridium botulinum (strain Alaska E43 / Type E3)
GN=era PE=3 SV=1
Length = 295
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 89/137 (64%), Gaps = 3/137 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQIVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKDSTNDVDLVLFLTNPDEEIGKGDKFILESLKDK--KCPVYLVL 119
Query: 234 NKKDLIKPGEIAKKLEV 250
NK D P +AK LE+
Sbjct: 120 NKIDESTPERVAKSLEM 136
>sp|A6LRP9|ERA_CLOB8 GTPase Era OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB
8052) GN=era PE=3 SV=1
Length = 298
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 88/137 (64%), Gaps = 3/137 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKESTKDVDLVLFLTNPDEEIGKGDKFILETLRDK--KCPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEV 250
NK D +AK LE+
Sbjct: 120 NKVDESTQDRVAKSLEM 136
>sp|Q3BVV5|ERA_XANC5 GTPase Era OS=Xanthomonas campestris pv. vesicatoria (strain 85-10)
GN=era PE=3 SV=1
Length = 300
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 71/98 (72%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG VAV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q++L DTPG
Sbjct: 8 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLVLVDTPG 67
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPE 210
+ ++ ++ +M + R + D V++++A + E
Sbjct: 68 LHREQKRAMNRVMNRAARGSLEGVDAAVLVIEAGRWDE 105
>sp|Q5H1R1|ERA_XANOR GTPase Era OS=Xanthomonas oryzae pv. oryzae (strain KACC10331 /
KXO85) GN=era PE=3 SV=1
Length = 299
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 71/98 (72%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG VAV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q++L DTPG
Sbjct: 8 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLVLVDTPG 67
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPE 210
+ ++ ++ +M + R + D V++++A + E
Sbjct: 68 LHREQKRAMNRVMNRAARGSLEGVDAAVLVIEAGRWDE 105
>sp|Q2P4M0|ERA_XANOM GTPase Era OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018)
GN=era PE=3 SV=1
Length = 299
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 71/98 (72%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG VAV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q++L DTPG
Sbjct: 8 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLVLVDTPG 67
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPE 210
+ ++ ++ +M + R + D V++++A + E
Sbjct: 68 LHREQKRAMNRVMNRAARGSLEGVDAAVLVIEAGRWDE 105
>sp|Q8PMU9|ERA_XANAC GTPase Era OS=Xanthomonas axonopodis pv. citri (strain 306) GN=era
PE=3 SV=1
Length = 299
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 71/98 (72%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG VAV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q++L DTPG
Sbjct: 8 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLVLVDTPG 67
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPE 210
+ ++ ++ +M + R + D V++++A + E
Sbjct: 68 LHREQKRAMNRVMNRAARGSLEGVDAAVLVIEAGRWDE 105
>sp|B9DNL3|ERA_STACT GTPase Era OS=Staphylococcus carnosus (strain TM300) GN=era PE=3
SV=1
Length = 299
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 90/137 (65%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKST N+++G K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVAIIGRPNVGKSTFMNRVLGHKIAIMSDKAQTTRNKIHGVMTEDDAQIIFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D ++ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLTEVDAVIFMVNANEEIGRGDEYIMEMLKN--IKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
+NK DL+ P +I +E
Sbjct: 121 INKIDLVHPDQIMPIIE 137
>sp|Q87C05|ERA_XYLFT GTPase Era OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964)
GN=era PE=3 SV=1
Length = 298
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
++ G +AV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q+IL DTPG
Sbjct: 7 YRCGRIAVIGRPNVGKSTLTNALVGTKISIVSNRPQTTRHRLLGIATFPEGQIILVDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+ ++ H ++ +M + R + + D +++ ++ E D + + D +P++LV
Sbjct: 67 LHREQKHPMNRLMNRTARGSLEDVDAALLVTESTHWNEE-DTLAYNLLND--TGIPVVLV 123
Query: 233 LNKKDLIK 240
+NK D K
Sbjct: 124 INKIDRFK 131
>sp|B2I605|ERA_XYLF2 GTPase Era OS=Xylella fastidiosa (strain M23) GN=era PE=3 SV=1
Length = 298
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
++ G +AV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q+IL DTPG
Sbjct: 7 YRCGRIAVIGRPNVGKSTLTNALVGTKISIVSNRPQTTRHRLLGIATFPEGQIILVDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+ ++ H ++ +M + R + + D +++ ++ E D + + D +P++LV
Sbjct: 67 LHREQKHPMNRLMNRTARGSLEDVDAALLVTESTHWNEE-DTLAYNLLND--TGIPVVLV 123
Query: 233 LNKKDLIK 240
+NK D K
Sbjct: 124 INKIDRFK 131
>sp|Q8PB51|ERA_XANCP GTPase Era OS=Xanthomonas campestris pv. campestris (strain ATCC
33913 / NCPPB 528 / LMG 568) GN=era PE=3 SV=1
Length = 298
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 71/98 (72%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG VAV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q++L DTPG
Sbjct: 7 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLMLVDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPE 210
+ ++ ++ +M + R + D V++++A + E
Sbjct: 67 LHREQKRAMNRVMNRAARGSLEGVDAAVLVIEAGRWDE 104
>sp|B0RX26|ERA_XANCB GTPase Era OS=Xanthomonas campestris pv. campestris (strain B100)
GN=era PE=3 SV=1
Length = 298
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 71/98 (72%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG VAV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q++L DTPG
Sbjct: 7 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLMLVDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPE 210
+ ++ ++ +M + R + D V++++A + E
Sbjct: 67 LHREQKRAMNRVMNRAARGSLEGVDAAVLVIEAGRWDE 104
>sp|Q4USF8|ERA_XANC8 GTPase Era OS=Xanthomonas campestris pv. campestris (strain 8004)
GN=era PE=3 SV=1
Length = 298
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 71/98 (72%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG VAV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q++L DTPG
Sbjct: 7 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLMLVDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPE 210
+ ++ ++ +M + R + D V++++A + E
Sbjct: 67 LHREQKRAMNRVMNRAARGSLEGVDAAVLVIEAGRWDE 104
>sp|Q9PB97|ERA_XYLFA GTPase Era OS=Xylella fastidiosa (strain 9a5c) GN=era PE=3 SV=1
Length = 298
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
++ G +AV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q++L DTPG
Sbjct: 7 YRCGRIAVIGRPNVGKSTLTNALVGTKISIVSNRPQTTRHRLLGIATFPEGQIVLVDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+ ++ H ++ +M + R + + D +++ ++ E D + + D +P++LV
Sbjct: 67 LHREQKHPMNRLMNRTARGSLEDVDAALLVTESTHWNEE-DTLAYNLLND--TGIPVVLV 123
Query: 233 LNKKDLIK 240
+NK D K
Sbjct: 124 INKIDRFK 131
>sp|B0U3D9|ERA_XYLFM GTPase Era OS=Xylella fastidiosa (strain M12) GN=era PE=3 SV=1
Length = 298
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
++ G +AV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q++L DTPG
Sbjct: 7 YRCGRIAVIGRPNVGKSTLTNALVGTKISIVSNRPQTTRHRLLGIATFPEGQIVLVDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+ ++ H ++ +M + R + + D +++ ++ E D + + D +P++LV
Sbjct: 67 LHREQKHPMNRLMNRTARGSLEDVDAALLVTESTHWNEE-DTLAYNLLND--TGIPVVLV 123
Query: 233 LNKKDLIK 240
+NK D K
Sbjct: 124 INKIDRFK 131
>sp|Q92BP8|ERA_LISIN GTPase Era OS=Listeria innocua serovar 6a (strain CLIP 11262)
GN=era PE=3 SV=1
Length = 301
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 3/136 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVFTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLE 249
NK DLI P ++ K +E
Sbjct: 123 NKIDLISPEDLIKLIE 138
>sp|Q8CP21|ERA_STAES GTPase Era OS=Staphylococcus epidermidis (strain ATCC 12228) GN=era
PE=3 SV=1
Length = 299
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 89/137 (64%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV--KTPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P + K+E
Sbjct: 121 LNKIDLVHPDTLMPKIE 137
>sp|Q5HNY0|ERA_STAEQ GTPase Era OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=era PE=3 SV=1
Length = 299
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 89/137 (64%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV--KTPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P + K+E
Sbjct: 121 LNKIDLVHPDTLMPKIE 137
>sp|B1HTJ0|ERA_LYSSC GTPase Era OS=Lysinibacillus sphaericus (strain C3-41) GN=era PE=3
SV=1
Length = 305
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 91/141 (64%), Gaps = 3/141 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+++++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + QMI
Sbjct: 4 TRSGYKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTTDSQMIFI 63
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D I+ +V+A + + DE + E + + P
Sbjct: 64 DTPGIHKPK-HKLGDFMLKVAKNTLREVDVIMFMVNAEQKLGKGDEFILEMLAG--NSTP 120
Query: 229 ILLVLNKKDLIKPGEIAKKLE 249
+ LV+NK D I P E+ +E
Sbjct: 121 VFLVINKIDQIHPDELLGIIE 141
>sp|A0AIR3|ERA_LISW6 GTPase Era OS=Listeria welshimeri serovar 6b (strain ATCC 35897 /
DSM 20650 / SLCC5334) GN=era PE=3 SV=1
Length = 301
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 3/136 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLE 249
NK DLI P ++ K +E
Sbjct: 123 NKIDLISPEDLFKLIE 138
>sp|B8DE49|ERA_LISMH GTPase Era OS=Listeria monocytogenes serotype 4a (strain HCC23)
GN=era PE=3 SV=1
Length = 301
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 3/136 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLE 249
NK DLI P ++ K +E
Sbjct: 123 NKIDLIAPEDLFKLIE 138
>sp|C6E2H7|ERA_GEOSM GTPase Era OS=Geobacter sp. (strain M21) GN=era PE=3 SV=1
Length = 297
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 14/150 (9%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S +SG+V+++G+PNVGKSTL N+++G+KL I ++KPQTTR+RI GI + P Q++
Sbjct: 2 SEKKFRSGFVSIVGRPNVGKSTLLNRILGEKLMITSDKPQTTRNRIKGIHNVPGGQIVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPER----IDEILEEGVGDHK 224
DTPGI K L+ M+ S+ D I+ LVD PE+ I E+L GV
Sbjct: 62 DTPGIHRAK-SRLNKFMVDEALSSVQGVDLILFLVDGAVDPEKEAGMIKEVL-SGV---- 115
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEVTTCF 254
P++LV+NK DL+ GE+ LE +C+
Sbjct: 116 -DAPVILVMNKIDLVPKGEL---LERMSCY 141
>sp|Q8Y750|ERA_LISMO GTPase Era OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=era PE=3 SV=1
Length = 301
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 3/136 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLE 249
NK DLI P ++ K +E
Sbjct: 123 NKIDLIAPEDLFKLIE 138
>sp|Q71ZK8|ERA_LISMF GTPase Era OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=era PE=3 SV=1
Length = 301
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 3/136 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLE 249
NK DLI P ++ K +E
Sbjct: 123 NKIDLIAPEDLFKLIE 138
>sp|C1KVA9|ERA_LISMC GTPase Era OS=Listeria monocytogenes serotype 4b (strain CLIP80459)
GN=era PE=3 SV=1
Length = 301
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 3/136 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLE 249
NK DLI P ++ K +E
Sbjct: 123 NKIDLIAPEDLFKLIE 138
>sp|B4SRK9|ERA_STRM5 GTPase Era OS=Stenotrophomonas maltophilia (strain R551-3) GN=era
PE=3 SV=1
Length = 298
Score = 104 bits (259), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 84/140 (60%), Gaps = 27/140 (19%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H G VAV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q++L DTPG
Sbjct: 7 HHCGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATYPEGQLVLVDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSA--GINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--- 227
+ + + ++ +M + R + G++A +V+ E G D +D L
Sbjct: 67 LHKVQKRAMNRVMNRAARGSLEGVDAGLLVI---------------EAGRWDEEDSLAFN 111
Query: 228 -------PILLVLNKKDLIK 240
P++LV+NK D +K
Sbjct: 112 VLRDAGIPVVLVVNKIDRLK 131
>sp|B2FPX8|ERA_STRMK GTPase Era OS=Stenotrophomonas maltophilia (strain K279a) GN=era
PE=3 SV=1
Length = 298
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 84/140 (60%), Gaps = 27/140 (19%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H G VAV+G+PNVGKSTL N ++G K+SIV+N+PQTTRHR+LGI + PE Q++L DTPG
Sbjct: 7 HHCGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATYPEGQLVLVDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSA--GINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--- 227
+ + + ++ +M + R + G++A +V+ E G D +D L
Sbjct: 67 LHKVQKRAMNRVMNRAARGSLEGVDAGLLVI---------------EAGRWDEEDSLAFN 111
Query: 228 -------PILLVLNKKDLIK 240
P++LV+NK D +K
Sbjct: 112 VLRDAGIPVVLVVNKIDRLK 131
>sp|Q9KD52|ERA_BACHD GTPase Era OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125) GN=era PE=3 SV=1
Length = 304
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 90/140 (64%), Gaps = 11/140 (7%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 9 KSGFVSIIGRPNVGKSTLLNHVIGQKIAIMSDKPQTTRNKIQGVYTSEDSQIVFIDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA----PERIDEILEEGVGDHKDKLPI 229
+ K H L MMK ++ D I+ +VD +A E I E L+E K P+
Sbjct: 69 HKPK-HKLGDFMMKVAQNTLKEVDLILYVVDGAEAFGPGEEFIIERLKEA------KTPV 121
Query: 230 LLVLNKKDLIKPGEIAKKLE 249
+LV+NK D + P ++ +E
Sbjct: 122 ILVINKIDKVHPDDLLSLIE 141
>sp|Q03Y33|ERA_LEUMM GTPase Era OS=Leuconostoc mesenteroides subsp. mesenteroides
(strain ATCC 8293 / NCDO 523) GN=era PE=3 SV=1
Length = 303
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + + Q++ DTPG
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDDAQVVFIDTPG- 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + L M+K+ SA AD I +VDA A R D+ + + + + K+ PI L++
Sbjct: 66 VHKPQNSLGDFMVKSAFSALHEADAIWFVVDASMARGRGDDFIIDRLQEVKNT-PIYLLI 124
Query: 234 NKKDLIKPGEI 244
NK DL+ P ++
Sbjct: 125 NKVDLLAPNDL 135
>sp|Q831T9|ERA_ENTFA GTPase Era OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=era PE=3 SV=1
Length = 300
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPG
Sbjct: 5 HKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+++ +A D + +V A + + D+ + E + ++ P+ L+
Sbjct: 65 IHKPK-HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFIIERLKNNNS--PVYLI 121
Query: 233 LNKKDLIKPGEIAKKLE 249
+NK D + P ++ +E
Sbjct: 122 INKIDKVHPDDLLSIIE 138
>sp|Q49Y10|ERA_STAS1 GTPase Era OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=era PE=3 SV=1
Length = 299
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 88/137 (64%), Gaps = 3/137 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+++++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ + D I+ +V+ + R DE + E + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMRVATNTLSEIDAIMFMVNVNEDIGRGDEYIMEML--KTIKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLE 249
LNK DL+ P E+ ++E
Sbjct: 121 LNKIDLVHPDELMPRIE 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,382,231
Number of Sequences: 539616
Number of extensions: 4058118
Number of successful extensions: 19191
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1720
Number of HSP's successfully gapped in prelim test: 948
Number of HSP's that attempted gapping in prelim test: 16094
Number of HSP's gapped (non-prelim): 3366
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)