Query 025347
Match_columns 254
No_of_seqs 153 out of 1064
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 08:30:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025347.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025347hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n10_A PHL P I, pollen allerge 100.0 2.1E-63 7.3E-68 439.6 24.6 212 27-252 14-241 (241)
2 2hcz_X Beta-expansin 1A; domai 100.0 1.4E-63 4.7E-68 442.0 22.9 213 28-254 15-244 (245)
3 3d30_A YOAJ, expansin like pro 100.0 1.1E-52 3.9E-57 364.3 23.3 192 30-254 4-206 (208)
4 1wc2_A Endoglucanase; hydrolas 100.0 3.7E-31 1.3E-35 221.4 8.0 124 30-163 12-163 (181)
5 3ft1_A PHL P 3 allergen; beta- 100.0 3.2E-28 1.1E-32 187.6 12.1 91 162-254 3-99 (100)
6 2jnz_A PHL P 3 allergen; timot 99.9 1.9E-26 6.4E-31 179.7 12.2 89 162-252 14-107 (108)
7 1bmw_A PHL P II, pollen allerg 99.9 2.3E-26 7.9E-31 176.2 -1.2 88 162-252 3-95 (96)
8 1bw3_A Barwin, basic barley SE 99.6 6.5E-17 2.2E-21 128.6 4.5 62 76-158 58-124 (125)
9 4avr_A PA4485; unknown functio 99.3 4.7E-11 1.6E-15 90.6 11.5 93 33-156 2-95 (95)
10 2kqa_A Cerato-platanin; elicit 98.0 2.1E-05 7E-10 62.4 8.8 66 67-156 52-120 (129)
11 3sul_A Cerato-platanin-like pr 97.9 2.3E-05 7.8E-10 61.8 6.8 68 67-157 46-117 (122)
12 3m3g_A EPL1 protein; fungal, p 97.9 3.2E-05 1.1E-09 60.8 6.8 66 67-157 46-115 (120)
13 3suj_A Cerato-platanin 1; doub 97.8 2.6E-05 9E-10 61.8 5.7 71 67-157 46-120 (127)
14 3suk_A Cerato-platanin-like pr 97.8 2.7E-05 9.2E-10 61.7 4.9 70 67-157 47-120 (125)
15 3sum_A Cerato-platanin-like pr 97.7 0.00013 4.3E-09 58.3 7.9 65 67-157 50-122 (136)
16 2eng_A Endoglucanase V; cellul 93.3 0.045 1.5E-06 46.5 3.0 53 67-134 72-124 (210)
17 3nrl_A Uncharacterized protein 63.0 5.1 0.00017 28.8 2.7 21 70-90 22-42 (81)
18 3pe9_A Fibronectin(III)-like m 49.9 50 0.0017 24.2 6.5 47 184-233 29-77 (98)
19 2kct_A Cytochrome C-type bioge 33.5 39 0.0013 24.8 3.5 28 220-247 30-61 (94)
20 2a9d_A Sulfite oxidase; molybd 29.0 81 0.0028 28.7 5.7 54 178-231 276-343 (372)
21 1sr3_A APO-CCME; OB fold, beta 27.3 52 0.0018 25.8 3.5 28 220-247 50-78 (136)
22 1ogp_A Sulfite oxidase; oxidor 26.8 88 0.003 28.6 5.5 26 178-203 289-315 (393)
23 2blf_A SORA, sulfite\:cytochro 24.8 55 0.0019 29.8 3.7 53 178-231 286-347 (373)
24 1sox_A Sulfite oxidase; oxidor 24.0 1.1E+02 0.0037 28.7 5.6 54 178-231 370-437 (466)
25 1j6q_A Cytochrome C maturation 23.9 72 0.0025 25.0 3.8 28 220-247 54-83 (136)
26 2c9r_A COPC, copper resistance 23.8 30 0.001 25.5 1.5 27 142-168 73-102 (102)
27 1lyq_A PCOC copper resistance 23.1 32 0.0011 25.5 1.5 27 142-168 75-104 (104)
28 3nct_A Protein PSIB; DNA bindi 22.3 2.7E+02 0.0093 21.8 6.7 46 145-194 57-106 (144)
29 2kvz_A ISPE; structural genomi 20.9 78 0.0027 22.7 3.2 32 219-252 7-38 (85)
No 1
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=100.00 E-value=2.1e-63 Score=439.64 Aligned_cols=212 Identities=29% Similarity=0.640 Sum_probs=189.8
Q ss_pred cCCCCceEEEEEEeCCCCCCCC--CccccCCCcCCCCCCCCeEEEechhhhCCCCCCCceEEEEEcCCCCCcCCCcEEEE
Q 025347 27 DYGGGWQSGHATFYGGGDASGT--MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVT 104 (254)
Q Consensus 27 ~~~~~~~~g~aT~Yg~~~~~~~--~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~p~~C~~~sv~v~ 104 (254)
.+.++|+.|+||||+++++.++ ++|||||++++..+++.++||+|+++|++|..||+||||+|.+.+ .|.+++|+|+
T Consensus 14 ~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~-~C~~~~v~V~ 92 (241)
T 1n10_A 14 TYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPE-ACSGEPVVVH 92 (241)
T ss_dssp BCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSST-TBCSCCEEEE
T ss_pred cccCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCC-ccCCCCEEEE
Confidence 3788999999999999887776 799999999887888999999999999999999999999998754 6998999999
Q ss_pred EecCCCCCCCCCCCCCCCCCCCCCceecChHHHHHhhc-------ccCCccceeEEEeecccCC--ceEEEEc--Cccce
Q 025347 105 ATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG--GIRFTVN--GHSYF 173 (254)
Q Consensus 105 V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~-------~~~G~v~i~w~~V~C~~~g--ni~~~v~--~~~~w 173 (254)
|||+|+ |.++..|||||+.||.+||. +..|+++|+||||+|+++| ||+|+++ +++||
T Consensus 93 VtD~C~------------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs~~~~ 160 (241)
T 1n10_A 93 ITDDNE------------EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNY 160 (241)
T ss_dssp EEEECS------------SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTCBTTE
T ss_pred EeEecC------------CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCCCcce
Confidence 999996 65567999999999999999 6899999999999999984 8999999 58999
Q ss_pred EEEEEEeecCCcceEEEEEEccC-CceeEccCCCCceEEeCCC--CCCcceEEEEEEcCCcEEEEcCccCCCCcCCeEEe
Q 025347 174 NLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSY--LNGQSLSFQLTASDGRTVTSNNVVPGNWQFGQTFE 250 (254)
Q Consensus 174 ~av~v~n~~G~~~I~sVeI~~~g-~~W~~m~r~~g~~W~~~~~--l~g~pl~vRiTs~~G~~v~~~~vip~~w~~g~~Y~ 250 (254)
++|+|.|++|.++|++|||++++ +.|++|+|+||++|+++.. |.+ ||+||||+.+|++|+++||||++|++|++|+
T Consensus 161 ~~vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~ 239 (241)
T 1n10_A 161 LALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAEDVIPEGWKADTSYE 239 (241)
T ss_dssp EEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESSSCEEEEEEEECSSCCSSEEEE
T ss_pred EEEEEEecCCCCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCC-CEEEEEEEeCCcEEEEccccCCCCCCCCEEe
Confidence 99999999999999999999987 6899999999999998874 777 9999999999999999999999999999999
Q ss_pred CC
Q 025347 251 GG 252 (254)
Q Consensus 251 s~ 252 (254)
++
T Consensus 240 ~~ 241 (241)
T 1n10_A 240 SK 241 (241)
T ss_dssp C-
T ss_pred CC
Confidence 84
No 2
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=100.00 E-value=1.4e-63 Score=441.99 Aligned_cols=213 Identities=32% Similarity=0.688 Sum_probs=197.8
Q ss_pred CCCCceEEEEEEeCCCCCCCC--CccccCCCcCCCCCCCCeEEEechhhhCCCCCCCceEEEEEcCCCCCcCCCcEEEEE
Q 025347 28 YGGGWQSGHATFYGGGDASGT--MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTA 105 (254)
Q Consensus 28 ~~~~~~~g~aT~Yg~~~~~~~--~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~p~~C~~~sv~v~V 105 (254)
++++|+.|+||||+++++.++ ++|||||++++..+++.++||+|+++|++|..||+||||+|.+.+ .|.+++|+|+|
T Consensus 15 ~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~-~C~~~sv~V~V 93 (245)
T 2hcz_X 15 YNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKP-ECSGNPVTVYI 93 (245)
T ss_dssp CCCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSS-SBCSSCEEEEE
T ss_pred cCCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCC-ccCCCCEEEEE
Confidence 778999999999999887777 789999999877788999999999999999999999999998744 69988999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCceecChHHHHHhhc-------ccCCccceeEEEeecccCC--ceEEEEc--CccceE
Q 025347 106 TNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG--GIRFTVN--GHSYFN 174 (254)
Q Consensus 106 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~-------~~~G~v~i~w~~V~C~~~g--ni~~~v~--~~~~w~ 174 (254)
||+||+ .++..|||||+.||.+||. ...|+++|+||||+|+++| ||+|+++ +++||+
T Consensus 94 tD~C~C------------~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs~~~~~ 161 (245)
T 2hcz_X 94 TDMNYE------------PIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYL 161 (245)
T ss_dssp EEECCC------------TTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCCSSSCC
T ss_pred EeccCC------------CCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCCCcceE
Confidence 999984 3358999999999999999 6899999999999999983 7999999 589999
Q ss_pred EEEEEeecCCcceEEEEEEccC-CceeEccCCCCceEEeCCC--CCCcceEEEEEEcCCcEEEEcCccCCCCcCCeEEeC
Q 025347 175 LVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSY--LNGQSLSFQLTASDGRTVTSNNVVPGNWQFGQTFEG 251 (254)
Q Consensus 175 av~v~n~~G~~~I~sVeI~~~g-~~W~~m~r~~g~~W~~~~~--l~g~pl~vRiTs~~G~~v~~~~vip~~w~~g~~Y~s 251 (254)
+|+|.|++|+++|++|||++++ ..|++|+|+||++|+++.+ |++ ||+||||+.+|++|+++||||++|++|++|++
T Consensus 162 avlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~~ 240 (245)
T 2hcz_X 162 AVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDVIPANWRPDAVYTS 240 (245)
T ss_dssp CEEEECCCTTCCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCS-SCCEEEEETTSCEEEESCSCCSSCCTTCEEEC
T ss_pred EEEEEecCCCCCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCC-CEEEEEEEeCCcEEEEeeeecCCCCCCCEEeC
Confidence 9999999999999999999987 5899999999999999875 777 99999999999999999999999999999999
Q ss_pred C-CC
Q 025347 252 G-QF 254 (254)
Q Consensus 252 ~-~~ 254 (254)
+ ||
T Consensus 241 ~~qf 244 (245)
T 2hcz_X 241 NVQF 244 (245)
T ss_dssp SCCC
T ss_pred cccc
Confidence 8 98
No 3
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=100.00 E-value=1.1e-52 Score=364.26 Aligned_cols=192 Identities=22% Similarity=0.329 Sum_probs=173.0
Q ss_pred CCceEEEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEechhhhCCC----CCCCceEEEEEcCCCCCcCCCcEEEEE
Q 025347 30 GGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG----LSCGSCYEMKCENDPKWCLPGSIIVTA 105 (254)
Q Consensus 30 ~~~~~g~aT~Yg~~~~~~~~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g----~~CG~C~~V~c~~~p~~C~~~sv~v~V 105 (254)
...+.|+||||++.. .+||||+.. .+++.++||+++.+|++| ..||+||||+|. +++|+|+|
T Consensus 4 ~~~~~G~aT~Y~~g~----~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~-------~gsv~V~v 69 (208)
T 3d30_A 4 DDLHEGYATYTGSGY----SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP-------KGKTTVYV 69 (208)
T ss_dssp TCCEEEEEEECSTTS----SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET-------TEEEEEEE
T ss_pred CCcEEEEEEEcCCCC----CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC-------CCcEEEEE
Confidence 346899999999754 379999864 346789999999999987 899999999993 35899999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCceecChHHHHHhhcccCCccceeEEEeecccCCceEEEEc--CccceEEEEEEeecC
Q 025347 106 TNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVN--GHSYFNLVLITNVGG 183 (254)
Q Consensus 106 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~w~~V~C~~~gni~~~v~--~~~~w~av~v~n~~G 183 (254)
+|+||. | +..|||||+.||.+||.+..|+++|+||+|+|+++|+|+|+++ +++||++|||.|++|
T Consensus 70 ~D~CP~-----------C--~~~~~DLS~~aF~~la~~~~G~i~v~~~~V~C~~~G~i~f~v~~Gs~~~~~~v~v~n~~g 136 (208)
T 3d30_A 70 TDLYPE-----------G--ARGALDLSPNAFRKIGNMKDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKY 136 (208)
T ss_dssp EEECTT-----------C--CTTCEEECHHHHHHHSCGGGSSEEEEEEEECCCCCSCCEEEECTTCSSSEEEEEEESCSS
T ss_pred EECCCC-----------C--CCCeEECCHHHHHHhcccCCCEEEEEEEEeCCCCCCceeEEEcCCCCCceEEEEEEecCC
Confidence 999998 8 4799999999999999999999999999999999999999999 699999999999985
Q ss_pred CcceEEEEEEccCCceeEccCCCCceEEeCCCCCCcceEEEEEEcCCcEEEEcCccCCCCcC----CeEEeCC-CC
Q 025347 184 AGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNWQF----GQTFEGG-QF 254 (254)
Q Consensus 184 ~~~I~sVeI~~~g~~W~~m~r~~g~~W~~~~~l~g~pl~vRiTs~~G~~v~~~~vip~~w~~----g~~Y~s~-~~ 254 (254)
+|++|||+++ +.|++|+|+|+|+|..+..+. .||+||||+.+|++| .+|||++|++ |.+|+++ ||
T Consensus 137 --~v~~v~i~~~-~~W~~m~r~~~n~~~~~~~~~-~pls~rvT~~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf 206 (208)
T 3d30_A 137 --PVMKMEYEKD-GKWINMEKMDYNHFVSTNLGT-GSLKVRMTDIRGKVV--KDTIPKLPESGTSKAYTVPGHVQF 206 (208)
T ss_dssp --CEEEEEEEET-TEEEEEEECTTSCEEEECCCS-SSEEEEEEETTCCEE--EEEECCCCSSCCSSCEEEECCCCC
T ss_pred --CEEEEEEecC-CcEEEccccccceeecCCCCC-CCEEEEEEECCCCEE--EEEECCCCccCcccceEEeCcCcc
Confidence 8999999988 689999999999887765444 599999999999999 7999999997 8999999 98
No 4
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=99.97 E-value=3.7e-31 Score=221.35 Aligned_cols=124 Identities=25% Similarity=0.441 Sum_probs=104.7
Q ss_pred CCceEEEEEEeCCCCCCCCCccccCCC-----cCCCCCCCCeEEEechhhhCCC------CCCCceEEEEEcCCC-----
Q 025347 30 GGWQSGHATFYGGGDASGTMGGACGYG-----NLYSQGYGTNTAALSTALFNNG------LSCGSCYEMKCENDP----- 93 (254)
Q Consensus 30 ~~~~~g~aT~Yg~~~~~~~~~GaCGy~-----~~~~~~~~~~~aA~s~~~~~~g------~~CG~C~~V~c~~~p----- 93 (254)
.+|..++||||++.. +|||||+ ++.+.+++.++||||+++|++| ..||+||||+|.+.+
T Consensus 12 ~g~~~A~aT~Yg~~~-----gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg 86 (181)
T 1wc2_A 12 NGKSCASTTNYHDSH-----KGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG 86 (181)
T ss_dssp TTEEEEEEEEECCCB-----CTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred CCccccceeEecCCC-----CcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCccccc
Confidence 459999999999864 7999999 5555677899999999999997 899999999997643
Q ss_pred CCcCCC-cEEEEEecCCCCCCCCCCCCCCCCCCC-----------CCceecChHHHHHhhcccCCccceeEEEeecccCC
Q 025347 94 KWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPP-----------LQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKG 161 (254)
Q Consensus 94 ~~C~~~-sv~v~V~D~Cp~~~~~~~~~~~~C~~~-----------~~~~DLS~~AF~~la~~~~G~v~i~w~~V~C~~~g 161 (254)
.+|..+ +|+|||||+||.. .+|++||+++ +.||||+..| .+||....|+++|+||||+|+..+
T Consensus 87 ~~~~~g~SI~VtaTN~CPpn----~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV~C~~~~ 161 (181)
T 1wc2_A 87 GPVREGLSKTFMITNLCPNI----YPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVVNCDSEH 161 (181)
T ss_dssp CCCCTTCEEEEEEEEEECSS----TTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEECHHHHH
T ss_pred ccCCCCCeEEEEEecCCCCC----CCCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEEeCCCCC
Confidence 234444 8999999999952 4678999753 6899999999 899999999999999999998744
Q ss_pred ce
Q 025347 162 GI 163 (254)
Q Consensus 162 ni 163 (254)
++
T Consensus 162 ~~ 163 (181)
T 1wc2_A 162 NH 163 (181)
T ss_dssp HH
T ss_pred Cc
Confidence 43
No 5
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=99.95 E-value=3.2e-28 Score=187.64 Aligned_cols=91 Identities=20% Similarity=0.418 Sum_probs=86.4
Q ss_pred ceEEEEc--CccceEEEEEEeecCCcceEEEEEEccCC-ceeEccCCCCceEEeCC--CCCCcceEEEEEEcCCcEEEEc
Q 025347 162 GIRFTVN--GHSYFNLVLITNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNS--YLNGQSLSFQLTASDGRTVTSN 236 (254)
Q Consensus 162 ni~~~v~--~~~~w~av~v~n~~G~~~I~sVeI~~~g~-~W~~m~r~~g~~W~~~~--~l~g~pl~vRiTs~~G~~v~~~ 236 (254)
+|+|+|+ |++||++|+|.|++|+++|++||||++++ .|++|+| ||++|++++ +|+| ||+||||+.+|++++++
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~G-plSfRvt~~~G~~~v~~ 80 (100)
T 3ft1_A 3 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD 80 (100)
T ss_dssp EEEEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCS-SEEEEEEETTCCEEEEE
T ss_pred CEEEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence 7999999 68999999999999999999999999984 7999999 999999886 7888 99999999999999999
Q ss_pred CccCCCCcCCeEEeCC-CC
Q 025347 237 NVVPGNWQFGQTFEGG-QF 254 (254)
Q Consensus 237 ~vip~~w~~g~~Y~s~-~~ 254 (254)
||||++|++|++|+++ ||
T Consensus 81 nViPa~W~~G~ty~s~vq~ 99 (100)
T 3ft1_A 81 EVIPTAFSIGKTYKPEEQE 99 (100)
T ss_dssp EEECTTCCTTCEECCCCBC
T ss_pred eEeCCCCCCCcEEeccccc
Confidence 9999999999999999 76
No 6
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=99.94 E-value=1.9e-26 Score=179.69 Aligned_cols=89 Identities=19% Similarity=0.449 Sum_probs=84.1
Q ss_pred ceEEEEc--CccceEEEEEEeecCCcceEEEEEEc-cCCceeEccCCCCceEEeCC--CCCCcceEEEEEEcCCcEEEEc
Q 025347 162 GIRFTVN--GHSYFNLVLITNVGGAGDVHSVSIKG-SKTGWQAMSRNWGQNWQSNS--YLNGQSLSFQLTASDGRTVTSN 236 (254)
Q Consensus 162 ni~~~v~--~~~~w~av~v~n~~G~~~I~sVeI~~-~g~~W~~m~r~~g~~W~~~~--~l~g~pl~vRiTs~~G~~v~~~ 236 (254)
||.|+|+ |++||++|+|.|++|+++|++||||+ +...|++|+|+ |++|+++. +|.| ||+||||+.+|++++++
T Consensus 14 ~v~f~V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~G-plSfRvtts~G~~~va~ 91 (108)
T 2jnz_A 14 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD 91 (108)
T ss_dssp EEEEEECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCS-SEEEEEEETTTEEEEEE
T ss_pred cEEEEEecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence 8999999 68999999999999999999999997 44789999999 99999986 7888 99999999999999999
Q ss_pred CccCCCCcCCeEEeCC
Q 025347 237 NVVPGNWQFGQTFEGG 252 (254)
Q Consensus 237 ~vip~~w~~g~~Y~s~ 252 (254)
||||++|++|+||+++
T Consensus 92 nViPa~W~~Gqty~s~ 107 (108)
T 2jnz_A 92 EVIPTAFSIGKTYKPE 107 (108)
T ss_dssp EEECSSCCTTCEECCC
T ss_pred eEECCCCCCCCEEeCC
Confidence 9999999999999985
No 7
>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A
Probab=99.91 E-value=2.3e-26 Score=176.16 Aligned_cols=88 Identities=25% Similarity=0.493 Sum_probs=81.8
Q ss_pred ceEEEEc--CccceEEEEEEeecCCcceEEEEEEcc-CCceeEccCCCCceEEeCC--CCCCcceEEEEEEcCCcEEEEc
Q 025347 162 GIRFTVN--GHSYFNLVLITNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNS--YLNGQSLSFQLTASDGRTVTSN 236 (254)
Q Consensus 162 ni~~~v~--~~~~w~av~v~n~~G~~~I~sVeI~~~-g~~W~~m~r~~g~~W~~~~--~l~g~pl~vRiTs~~G~~v~~~ 236 (254)
+|+|+|+ |++||++|+|.|++ ++|++||||++ ...|++|+|+||++|+++. +|+| ||+||||+.+|++++++
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~G-plSfRvt~~~G~~~v~~ 79 (96)
T 1bmw_A 3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEKGMKNVFD 79 (96)
T ss_dssp CCCCCCCTTCSSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCC-CCCBCCEETTTEECCBS
T ss_pred CEEEEEecCCCCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCC-CEEEEEEEcCCcEEEEe
Confidence 7899999 79999999999998 68999999995 4789999999999999987 6788 99999999999999999
Q ss_pred CccCCCCcCCeEEeCC
Q 025347 237 NVVPGNWQFGQTFEGG 252 (254)
Q Consensus 237 ~vip~~w~~g~~Y~s~ 252 (254)
||||++|++|++|+++
T Consensus 80 nViP~~W~~G~ty~~~ 95 (96)
T 1bmw_A 80 DVVPEKYTIGATYAPE 95 (96)
T ss_dssp SCSCSSCCSSSCCCC-
T ss_pred eEeCCCCCCCCEEeCC
Confidence 9999999999999985
No 8
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=99.65 E-value=6.5e-17 Score=128.56 Aligned_cols=62 Identities=18% Similarity=0.515 Sum_probs=55.4
Q ss_pred CCCCCCCceEEEEEcCCCCCcCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceecC-hHHHHHhhc----ccCCccce
Q 025347 76 NNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMA-EPAFLQIAQ----YRAGIVPI 150 (254)
Q Consensus 76 ~~g~~CG~C~~V~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS-~~AF~~la~----~~~G~v~i 150 (254)
+++..||+|++|++..+ +++|+|+|+|+||. | +|||| +.||++|+. ...|+++|
T Consensus 58 ~~g~~CG~cv~Vtn~~n-----GksV~V~VvD~CP~-----------g-----gLDLS~~~AF~~Ia~~g~G~~~G~i~V 116 (125)
T 1bw3_A 58 RGQAACGKCLRVTNPAT-----GAQITARIVDQCAN-----------G-----GLDLDWDTVFTKIDTNGIGYQQGHLNV 116 (125)
T ss_dssp CSGGGTTCEEEEEETTT-----TEEEEEEEEECCSS-----------S-----SCCSCSSSSHHHHCSSCHHHHHSEEEE
T ss_pred CCCcccCCEEEeEeCCC-----CCEEEEEEEEeCCC-----------C-----CCCCCCHHHHHHHhccCCcccCcEEEE
Confidence 67889999999999643 35999999999996 4 39999 999999998 78999999
Q ss_pred eEEEeecc
Q 025347 151 SFRRIPCA 158 (254)
Q Consensus 151 ~w~~V~C~ 158 (254)
+|++|+|+
T Consensus 117 ~w~~V~C~ 124 (125)
T 1bw3_A 117 NYQFVDCR 124 (125)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99999996
No 9
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=99.27 E-value=4.7e-11 Score=90.56 Aligned_cols=93 Identities=20% Similarity=0.297 Sum_probs=73.8
Q ss_pred eEEEEEEeCCC-CCCCCCccccCCCcCCCCCCCCeEEEechhhhCCCCCCCceEEEEEcCCCCCcCCCcEEEEEecCCCC
Q 025347 33 QSGHATFYGGG-DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPP 111 (254)
Q Consensus 33 ~~g~aT~Yg~~-~~~~~~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~p~~C~~~sv~v~V~D~Cp~ 111 (254)
..|.|+||+.. .+ ...|||-.-. ...++||-. ...||..++|+...+ +++|+|+|.|+||.
T Consensus 2 ~~G~ASwYg~~f~G---~~TA~Ge~~~----~~~~tAAH~------tlP~gt~vrVtNl~n-----GksVvVrVnDRGP~ 63 (95)
T 4avr_A 2 DTGEASYYGSRHAG---LRTASGERYN----PNAMTAAHR------TLPFGARVRVTNLDN-----RRSVVVRINDRGPF 63 (95)
T ss_dssp EEEEEEECCGGGTT---SBCTTSCBCC----TTSCEEECS------SSCTTCEEEEEETTT-----CCEEEEEEEECCCC
T ss_pred CEEEEEEECCccCC---CCCCCccCcC----CCCCEEEcC------CCCCCcEEEEEECCC-----CcEEEEEEccCCCC
Confidence 47999999963 11 2588875421 235688876 347999999999764 46999999999997
Q ss_pred CCCCCCCCCCCCCCCCCceecChHHHHHhhcccCCccceeEEEee
Q 025347 112 NLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIP 156 (254)
Q Consensus 112 ~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~w~~V~ 156 (254)
|. ...||||..||++|+....|+.+|+|+.++
T Consensus 64 -----------~~--griIDLS~aAa~~Lg~~~~G~~~V~ve~~~ 95 (95)
T 4avr_A 64 -----------RR--GRIIDVSRKAAEGLGMIRSGVAPVRIESLD 95 (95)
T ss_dssp -----------ST--TEEEEECHHHHHHHTCTTTSCEEEEEEEC-
T ss_pred -----------CC--CCEEEeCHHHHHHhCCcCCCEEEEEEEEeC
Confidence 64 468999999999999999999999999864
No 10
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=98.04 E-value=2.1e-05 Score=62.41 Aligned_cols=66 Identities=21% Similarity=0.467 Sum_probs=53.6
Q ss_pred EEEech-hhhCCCCCCCceEEEEEcCCCCCcCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceecChHHHHHhhc-cc
Q 025347 67 TAALST-ALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-YR 144 (254)
Q Consensus 67 ~aA~s~-~~~~~g~~CG~C~~V~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~-~~ 144 (254)
+.+... +-|+ ...||.|+||+..+ +++|.|..+|.-+ ..|+++.+||++|.. ..
T Consensus 52 IGga~~iagWN-S~~CGtC~~lty~n------g~sI~vlaID~A~-----------------~gFnIs~~Amn~LT~G~~ 107 (129)
T 2kqa_A 52 VGGIPDIAGWD-SPSCGTCWKVTIPN------GNSIFIRGVDSGR-----------------GGFNVNPTAFTKLVGSTE 107 (129)
T ss_dssp EEEETTCCSTT-CTTCSCEEEEEETT------TEEEEEEEEEECS-----------------SSEEECHHHHHHHHSSSS
T ss_pred eccchhhccCC-CCCCCceEEEEEcC------CCEEEEEEEccCC-----------------CceeehHHHHHHhcCCcc
Confidence 544443 4476 78999999999941 3599999999855 359999999999987 67
Q ss_pred CCcc-ceeEEEee
Q 025347 145 AGIV-PISFRRIP 156 (254)
Q Consensus 145 ~G~v-~i~w~~V~ 156 (254)
.|+| +++|++|+
T Consensus 108 lG~V~~a~~~qV~ 120 (129)
T 2kqa_A 108 AGRVDNVNYVQVD 120 (129)
T ss_dssp SCCBCSCEEEECC
T ss_pred cCcEeEEEEEEcC
Confidence 8999 99999997
No 11
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=97.90 E-value=2.3e-05 Score=61.77 Aligned_cols=68 Identities=19% Similarity=0.368 Sum_probs=53.5
Q ss_pred EEEech-hhhCCCCCCCceEEEEEcCCCCCcCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceecChHHHHHhhcc--
Q 025347 67 TAALST-ALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQY-- 143 (254)
Q Consensus 67 ~aA~s~-~~~~~g~~CG~C~~V~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~-- 143 (254)
|.+... +-|++ ..||.|+|++.... +++|.|..+|.-++ .|+|+.+||+.|..-
T Consensus 46 IGg~~~V~gwnS-~~CGtC~~lty~~~-----g~si~vlaID~a~~-----------------Gfnis~~Amn~LT~G~a 102 (122)
T 3sul_A 46 VGAVDTITGWNS-ESCGTCYQITWSGT-----GKTIHVVGVDVAGN-----------------GFNVGQRAMDDLTNGQA 102 (122)
T ss_dssp EEEETTCCSTTC-TTTTCEEEEEETTT-----TEEEEEEEEEECSS-----------------SEEECHHHHHHHHTSCH
T ss_pred cccccccccCCC-CCCCceEEEEEcCC-----CcEEEEEEEecCCC-----------------ceeehHHHHHHhcCCcc
Confidence 655443 44665 89999999999521 35999999998553 499999999999853
Q ss_pred -cCCccceeEEEeec
Q 025347 144 -RAGIVPISFRRIPC 157 (254)
Q Consensus 144 -~~G~v~i~w~~V~C 157 (254)
..|+|++++++|+=
T Consensus 103 ~~lG~V~a~~~qV~~ 117 (122)
T 3sul_A 103 VALGNIDVTATLVDK 117 (122)
T ss_dssp HHHSEEEEEEEEECG
T ss_pred eecceEeEEEEEcCH
Confidence 45999999999973
No 12
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=97.85 E-value=3.2e-05 Score=60.79 Aligned_cols=66 Identities=23% Similarity=0.428 Sum_probs=51.9
Q ss_pred EEEech-hhhCCCCCCCceEEEEEcCCCCCcCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceecChHHHHHhhcc--
Q 025347 67 TAALST-ALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQY-- 143 (254)
Q Consensus 67 ~aA~s~-~~~~~g~~CG~C~~V~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~-- 143 (254)
|.+... +-|+ ...||.|+|++.. +++|.|..+|.-+ ..|+|+.+||+.|..-
T Consensus 46 IGg~~~i~gwn-s~~CGtC~~lty~-------g~si~vlaID~a~-----------------~Gfnis~~A~n~LT~G~a 100 (120)
T 3m3g_A 46 IGGAAAVAGWN-SASCGTCWKLQYS-------GHTIYVLAVDHAA-----------------SGFNIALDAMNALTGGQA 100 (120)
T ss_dssp EEEETTCCSTT-CTTTTCEEEEEET-------TEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCH
T ss_pred cccccccccCC-CCCCCceEEEEEC-------CeEEEEEEEecCC-----------------CceeecHHHHHHhhCCcc
Confidence 554442 3465 5799999999994 2599999999754 3599999999999852
Q ss_pred -cCCccceeEEEeec
Q 025347 144 -RAGIVPISFRRIPC 157 (254)
Q Consensus 144 -~~G~v~i~w~~V~C 157 (254)
..|+|++++++|+=
T Consensus 101 ~~lG~V~a~~~~V~~ 115 (120)
T 3m3g_A 101 VQLGRVSATATQVPV 115 (120)
T ss_dssp HHHCEEECEEEEECG
T ss_pred eeeeeEeEEEEEcCH
Confidence 45999999999973
No 13
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=97.81 E-value=2.6e-05 Score=61.83 Aligned_cols=71 Identities=24% Similarity=0.436 Sum_probs=52.8
Q ss_pred EEEec-hhhhCCCCCCCceEEEEEcCCCCCcCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceecChHHHHHhhcc--
Q 025347 67 TAALS-TALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQY-- 143 (254)
Q Consensus 67 ~aA~s-~~~~~~g~~CG~C~~V~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~-- 143 (254)
|.+.. -+-|+ ...||.|+|++..+.-. ..++|.|..+|.-++ .|+|+.+||+.|..-
T Consensus 46 IGg~~~i~gwn-s~~CGtC~~lty~g~~~--~~~si~vlaID~a~~-----------------Gfnis~~Amn~LT~g~a 105 (127)
T 3suj_A 46 IGGSSDIAGYN-SPNCGSCYQLTYSSAHT--TPKSIYMVAIDRSAE-----------------GFTASKQAMDDLTNKRA 105 (127)
T ss_dssp EEEETTCCSTT-CTTTTCEEEEEECCSSS--CCEEEEEEEEEECSS-----------------SEEECHHHHHHHHTSCH
T ss_pred eccccccccCC-CCCCCceEEEEECCCCC--cceEEEEEEEecCCC-----------------ceeecHHHHHHhcCCcc
Confidence 44443 23465 57999999999964100 124999999998553 499999999999853
Q ss_pred -cCCccceeEEEeec
Q 025347 144 -RAGIVPISFRRIPC 157 (254)
Q Consensus 144 -~~G~v~i~w~~V~C 157 (254)
..|+|++++++|+=
T Consensus 106 ~~lG~V~~~~~~V~~ 120 (127)
T 3suj_A 106 EELGTVNVDVRKVDF 120 (127)
T ss_dssp HHHSSEEEEEEEECG
T ss_pred ccceeEEEEEEEeCH
Confidence 45899999999973
No 14
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=97.75 E-value=2.7e-05 Score=61.65 Aligned_cols=70 Identities=21% Similarity=0.377 Sum_probs=52.8
Q ss_pred EEEech-hhhCCCCCCCceEEEEEcCCCCCcCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceecChHHHHHhhcc--
Q 025347 67 TAALST-ALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQY-- 143 (254)
Q Consensus 67 ~aA~s~-~~~~~g~~CG~C~~V~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~-- 143 (254)
|.+... .-|+ ...||.|+|++..+ |. ..++|.|..+|.-++ .|+|+.+||+.|..-
T Consensus 47 IGg~~~i~gwn-S~~CGtC~~lty~g-~~--~~~si~vlaID~a~~-----------------Gfnis~~Amn~LT~G~a 105 (125)
T 3suk_A 47 IGASSDIGGFN-SPACGNCYTISFTF-QG--VTRSINLVAIDHAGN-----------------GFNVAQAAMDELTNGNA 105 (125)
T ss_dssp EEEETTCCSTT-CTTTTCEEEEEEEE-TT--EEEEEEEEEEEECSS-----------------SEEECHHHHHHHHTSCH
T ss_pred eccccccccCC-CCCCCeeEEEEEcC-CC--cceEEEEEEEecCCC-----------------ceeecHHHHHHhcCCcc
Confidence 554443 4465 47999999999954 10 024999999997553 499999999999863
Q ss_pred -cCCccceeEEEeec
Q 025347 144 -RAGIVPISFRRIPC 157 (254)
Q Consensus 144 -~~G~v~i~w~~V~C 157 (254)
..|+|++++++|+=
T Consensus 106 ~~lG~V~~~~~~V~~ 120 (125)
T 3suk_A 106 VALGTIDVQSQQVAR 120 (125)
T ss_dssp HHHCEEEEEEEEECG
T ss_pred cccceEeEEEEEcCH
Confidence 45999999999973
No 15
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=97.69 E-value=0.00013 Score=58.30 Aligned_cols=65 Identities=15% Similarity=0.248 Sum_probs=51.2
Q ss_pred EEEechhhhCCCCCCCceEEEEEcCCCCCcCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceecChHHHHHhhcc---
Q 025347 67 TAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQY--- 143 (254)
Q Consensus 67 ~aA~s~~~~~~g~~CG~C~~V~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~--- 143 (254)
|.++. |+ ...||.|++|+.. +++|.|..+|.-.+ ..-|||+.+||+.|..-
T Consensus 50 igg~~---wn-s~~CGtCwkLtY~-------G~sI~vlaID~a~~---------------g~~FnIs~~Amn~LT~G~~a 103 (136)
T 3sum_A 50 FVAAP---EA-QTECGSCWKLRYK-------GNHAFVTVVDRVEE---------------ANLFVGGTDLVKNLTTFNGA 103 (136)
T ss_dssp EEECC---BT-TBCTTCEEEEEET-------TEEEEEEEEECCCS---------------TTEEEECHHHHHHHTCBTTB
T ss_pred ccccc---cC-CCCCCceEEEEEC-------CeEEEEEEEecCCC---------------cceEeehHHHHHHHhCCCcc
Confidence 65555 54 6899999999994 24999999997543 12399999999999853
Q ss_pred ----cCCccce-eEEEeec
Q 025347 144 ----RAGIVPI-SFRRIPC 157 (254)
Q Consensus 144 ----~~G~v~i-~w~~V~C 157 (254)
..|+|++ +|++|+=
T Consensus 104 ~~a~elG~Vda~~~~qVd~ 122 (136)
T 3sum_A 104 PEGYDWGTAQLFSAYQVDG 122 (136)
T ss_dssp CHHHHHSEEECSEEEEECG
T ss_pred ccceecceeeeeEEEEcCH
Confidence 3589999 9999973
No 16
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=93.33 E-value=0.045 Score=46.50 Aligned_cols=53 Identities=28% Similarity=0.343 Sum_probs=34.2
Q ss_pred EEEechhhhCCCCCCCceEEEEEcCCCCCcCCCcEEEEEecCCCCCCCCCCCCCCCCCCCCCceecCh
Q 025347 67 TAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAE 134 (254)
Q Consensus 67 ~aA~s~~~~~~g~~CG~C~~V~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~ 134 (254)
+||.+-.--.....|++|||++=.+.+ ..+++.+|+||+...+- ..+||||.-
T Consensus 72 FaA~~~~g~~e~~~Cc~C~~LtFt~~~--~~GKkmiVQ~TNtG~Dl-------------~~n~FDl~i 124 (210)
T 2eng_A 72 FAATSIAGSNEAGWCCACYELTFTSGP--VAGKKMVVQSTSTGGDL-------------GSNHFDLNI 124 (210)
T ss_dssp EEEEECTTCCHHHHTTCEEEEEECSGG--GTTCEEEEEEEEC------------------CCEEEEEC
T ss_pred eeeeeccCCccccccceeEEEEEcCCC--cCCCEEEEEEecccCCC-------------CCCceeEec
Confidence 566652211123579999999998653 34679999999998651 358999964
No 17
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=63.03 E-value=5.1 Score=28.83 Aligned_cols=21 Identities=33% Similarity=0.937 Sum_probs=16.3
Q ss_pred echhhhCCCCCCCceEEEEEc
Q 025347 70 LSTALFNNGLSCGSCYEMKCE 90 (254)
Q Consensus 70 ~s~~~~~~g~~CG~C~~V~c~ 90 (254)
.+...|.+|..||.|+||.-.
T Consensus 22 ~~~~~~ygGlHCGE~feV~v~ 42 (81)
T 3nrl_A 22 FDLESFYGGLHCGECFDVKVK 42 (81)
T ss_dssp EETTEECCCCCTTCEEEEEET
T ss_pred eccccccCCcccccEEEEEEC
Confidence 334557789999999999763
No 18
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=49.89 E-value=50 Score=24.17 Aligned_cols=47 Identities=13% Similarity=0.197 Sum_probs=30.3
Q ss_pred CcceEEEEEEccCCc-eeEccCCCCceEEeCCCCCCc-ceEEEEEEcCCcEE
Q 025347 184 AGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQ-SLSFQLTASDGRTV 233 (254)
Q Consensus 184 ~~~I~sVeI~~~g~~-W~~m~r~~g~~W~~~~~l~g~-pl~vRiTs~~G~~v 233 (254)
++.|.+||+.-.|.. ...-.+.|...|... .|. .|..|.+|..|..-
T Consensus 29 dg~V~kVef~vdg~~vg~dt~apy~~~w~~~---~G~htl~a~AtD~~G~~~ 77 (98)
T 3pe9_A 29 DGKISRVDFLVDGEVIGSDREAPYEYEWKAV---EGNHEISVIAYDDDDAAS 77 (98)
T ss_dssp SSCEEEEEEEETTEEEEEECSSSEEEEEECC---SEEEEEEEEEEETTCCBC
T ss_pred CCCEEEEEEEECCEEecccccCCEEEEEEcC---CccEEEEEEEEECCCCEE
Confidence 456999999987632 234445555566643 343 67788889888543
No 19
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=33.48 E-value=39 Score=24.80 Aligned_cols=28 Identities=25% Similarity=0.453 Sum_probs=21.4
Q ss_pred ceEEEEEEcC--Cc--EEEEcCccCCCCcCCe
Q 025347 220 SLSFQLTASD--GR--TVTSNNVVPGNWQFGQ 247 (254)
Q Consensus 220 pl~vRiTs~~--G~--~v~~~~vip~~w~~g~ 247 (254)
.++|+|||.+ ++ .|++..++|+.|+-|+
T Consensus 30 ~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGq 61 (94)
T 2kct_A 30 GVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGV 61 (94)
T ss_dssp EEEEEEECSSCTTCEEEEEEESCCCTTCCTTC
T ss_pred EEEEEEEcCCCCCcEEEEEECCCCCccccCCC
Confidence 5888899862 33 5566799999999885
No 20
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=28.96 E-value=81 Score=28.68 Aligned_cols=54 Identities=17% Similarity=0.292 Sum_probs=30.9
Q ss_pred EEeecCCcceEEEEEEccC-CceeEccCC---------CC-ceEEeCCC-CCC--cceEEEEEEcCCc
Q 025347 178 ITNVGGAGDVHSVSIKGSK-TGWQAMSRN---------WG-QNWQSNSY-LNG--QSLSFQLTASDGR 231 (254)
Q Consensus 178 v~n~~G~~~I~sVeI~~~g-~~W~~m~r~---------~g-~~W~~~~~-l~g--~pl~vRiTs~~G~ 231 (254)
+.+.+|...|+.|||..++ .+|+...-. |- -.|++.-+ ..+ --+.+|-||..|.
T Consensus 276 ~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~W~~W~~~~~~~~g~~~~i~~RA~D~~g~ 343 (372)
T 2a9d_A 276 YAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELEIVCKAVDSSYN 343 (372)
T ss_dssp EEECSTTCCEEEEEEESBSSSSCEECEECSCCCCTTCCCSCEEEEEEEEECTTCEEEEEEEEEETTCC
T ss_pred EEEcCCCCCEEEEEEEcCCCCcceEeEcCCcccccCCccEEEEEEEeEEcCCCCEEEEEEEEEcCCCC
Confidence 4455543579999999886 589855432 11 13554211 122 1456777777773
No 21
>1sr3_A APO-CCME; OB fold, beta barrel, flexible C-terminal domain, chaperone; NMR {Escherichia coli} SCOP: b.40.9.1
Probab=27.31 E-value=52 Score=25.80 Aligned_cols=28 Identities=21% Similarity=0.544 Sum_probs=21.4
Q ss_pred ceEEEEEEcCCc-EEEEcCccCCCCcCCe
Q 025347 220 SLSFQLTASDGR-TVTSNNVVPGNWQFGQ 247 (254)
Q Consensus 220 pl~vRiTs~~G~-~v~~~~vip~~w~~g~ 247 (254)
.++|+|||.... .|++..++|+.|+-|+
T Consensus 50 ~v~F~vtD~~~~v~V~Y~GilPDlFrEGq 78 (136)
T 1sr3_A 50 KVTFTIYDAEGSVDVSYEGILPDLFREGQ 78 (136)
T ss_dssp EEEEEEECSSCEEEEEEESCCCTTCCTTS
T ss_pred EEEEEEEeCCcEEEEEECCCCCccccCCC
Confidence 588888886443 5666789999998875
No 22
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=26.77 E-value=88 Score=28.64 Aligned_cols=26 Identities=23% Similarity=0.392 Sum_probs=19.6
Q ss_pred EEeecCCcceEEEEEEccC-CceeEcc
Q 025347 178 ITNVGGAGDVHSVSIKGSK-TGWQAMS 203 (254)
Q Consensus 178 v~n~~G~~~I~sVeI~~~g-~~W~~m~ 203 (254)
..+.+|...|+.|||..++ .+|+...
T Consensus 289 ~A~sGgg~~I~rVEVS~DgG~tW~~A~ 315 (393)
T 1ogp_A 289 YAVSGGGRGIERVDISLDGGKNWVEAS 315 (393)
T ss_dssp EEECSTTCCEEEEEEESSTTSSCEECE
T ss_pred EEEcCCCCCEEEEEEEcCCCCCceEee
Confidence 4556655689999999886 5898544
No 23
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=24.82 E-value=55 Score=29.83 Aligned_cols=53 Identities=19% Similarity=0.418 Sum_probs=31.7
Q ss_pred EEeecCCcceEEEEEEccC-CceeEccCC-----CC-ceEEeCCC-CCCc-ceEEEEEEcCCc
Q 025347 178 ITNVGGAGDVHSVSIKGSK-TGWQAMSRN-----WG-QNWQSNSY-LNGQ-SLSFQLTASDGR 231 (254)
Q Consensus 178 v~n~~G~~~I~sVeI~~~g-~~W~~m~r~-----~g-~~W~~~~~-l~g~-pl~vRiTs~~G~ 231 (254)
+.+ +|...|+.|||..++ .+|+...-. +- -.|+++=+ ..|. -+.+|-+|..|.
T Consensus 286 ~A~-~Gg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~W~~W~~~~~~~~g~~~i~~RA~D~~g~ 347 (373)
T 2blf_A 286 IAF-DGGYGITQVSVSADAGKSWTNATLDPGLGKYSFRGWKAVLPLTKGDHVLMCRATNARGE 347 (373)
T ss_dssp EEE-CSSSCEEEEEEESSTTSSCEECEECCCSCTTSCEEEEEEEEECSEEEEEEEEEEETTSC
T ss_pred EEE-cCCCCEEEEEEEeCCCCCceEeEeCCCCCCCeEEEEEEEEEcCCCcEEEEEEEEcCCCC
Confidence 444 445789999999887 589854422 11 24554322 3332 466777887774
No 24
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=23.96 E-value=1.1e+02 Score=28.73 Aligned_cols=54 Identities=17% Similarity=0.292 Sum_probs=30.9
Q ss_pred EEeecCCcceEEEEEEccC-CceeEccCC---------CC-ceEEeCCC-CCC--cceEEEEEEcCCc
Q 025347 178 ITNVGGAGDVHSVSIKGSK-TGWQAMSRN---------WG-QNWQSNSY-LNG--QSLSFQLTASDGR 231 (254)
Q Consensus 178 v~n~~G~~~I~sVeI~~~g-~~W~~m~r~---------~g-~~W~~~~~-l~g--~pl~vRiTs~~G~ 231 (254)
+.+.+|..+|+.|||..++ .+|+...-. |- -.|++.-+ ..+ --+.+|-||..|.
T Consensus 370 ~A~sggg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~W~~W~~~~~~~~g~~~~i~~RA~D~~g~ 437 (466)
T 1sox_A 370 YAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELEIVCKAVDSSYN 437 (466)
T ss_dssp EEECSTTCCEEEEEEESBTTSSCEECEECSCCCCTTCCCSCEEEEEEEEECTTCEEEEEEEEEETTCC
T ss_pred EEEcCCCCCEEEEEEEcCCCCcceEeecCCcccccCCccEEEEEEEeEEcCCCCEEEEEEEEEcCCCC
Confidence 4455543479999999886 589855432 11 13554211 122 1456777777763
No 25
>1j6q_A Cytochrome C maturation protein E; all-beta protein, heme delivery,cytochrome C maturation, OB- (oligonucleotide binding)fold; NMR {Shewanella putrefaciens} SCOP: b.40.9.1 PDB: 1lm0_A
Probab=23.89 E-value=72 Score=24.96 Aligned_cols=28 Identities=29% Similarity=0.455 Sum_probs=21.6
Q ss_pred ceEEEEEEcCC--cEEEEcCccCCCCcCCe
Q 025347 220 SLSFQLTASDG--RTVTSNNVVPGNWQFGQ 247 (254)
Q Consensus 220 pl~vRiTs~~G--~~v~~~~vip~~w~~g~ 247 (254)
.++|+|||..+ -.|++..++|+.|+-|+
T Consensus 54 ~v~F~vtD~~~~~v~V~Y~GilPDlFrEGq 83 (136)
T 1j6q_A 54 HVQFAVHDSLGGEILVTYDDLLPDLFREGQ 83 (136)
T ss_dssp CEEEEEECTTCCCEEEEECSCCTTSCCSSS
T ss_pred EEEEEEEcCCCCEEEEEECCCCCccccCCC
Confidence 58999998333 35667899999999875
No 26
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=23.78 E-value=30 Score=25.45 Aligned_cols=27 Identities=22% Similarity=0.523 Sum_probs=21.6
Q ss_pred cccCCccceeEEEeeccc---CCceEEEEc
Q 025347 142 QYRAGIVPISFRRIPCAK---KGGIRFTVN 168 (254)
Q Consensus 142 ~~~~G~v~i~w~~V~C~~---~gni~~~v~ 168 (254)
.+..|.+.|+||-|+=+- .|.+.|.|+
T Consensus 73 ~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 102 (102)
T 2c9r_A 73 PLTAGTYKVDWRAVSSDTFPITGSVTFKVK 102 (102)
T ss_dssp CCCSEEEEEEEEECCTTCCCEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 457899999999999872 567888775
No 27
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=23.09 E-value=32 Score=25.46 Aligned_cols=27 Identities=26% Similarity=0.493 Sum_probs=21.6
Q ss_pred cccCCccceeEEEeeccc---CCceEEEEc
Q 025347 142 QYRAGIVPISFRRIPCAK---KGGIRFTVN 168 (254)
Q Consensus 142 ~~~~G~v~i~w~~V~C~~---~gni~~~v~ 168 (254)
.+..|.+.|+||-|+=+- .|.+.|.|+
T Consensus 75 ~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 104 (104)
T 1lyq_A 75 PLPAGTYRVDWRAVSSDTHPITGNYTFTVK 104 (104)
T ss_dssp CCCSEEEEEEEEECCTTSCCEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 457899999999999873 567888775
No 28
>3nct_A Protein PSIB; DNA binding protein, chaperone; 2.20A {Escherichia coli}
Probab=22.33 E-value=2.7e+02 Score=21.82 Aligned_cols=46 Identities=26% Similarity=0.525 Sum_probs=30.6
Q ss_pred CCccceeEEEeecccCCceEEEEc--C--ccceEEEEEEeecCCcceEEEEEEc
Q 025347 145 AGIVPISFRRIPCAKKGGIRFTVN--G--HSYFNLVLITNVGGAGDVHSVSIKG 194 (254)
Q Consensus 145 ~G~v~i~w~~V~C~~~gni~~~v~--~--~~~w~av~v~n~~G~~~I~sVeI~~ 194 (254)
-|-++|+-|+-|=. ++..+.+= | +|+|+.+++ +.+| -++.-|....
T Consensus 57 gGffPVq~RfsP~~--~~f~l~vCSpG~~sP~W~~Vl~-~~gG-~pfavv~~~~ 106 (144)
T 3nct_A 57 GGFFPVQVRFTPAH--ERFHLALCSPGDVSQVWVLVLV-NAGG-EPFAVVQVQR 106 (144)
T ss_dssp CSCSSSEEEEEETT--CSEEEEEECSSSSCSSEEEEEE-EGGG-CSEEEEEEES
T ss_pred cceeeEEEEEcCCC--CceEEEEeCCCCCCcceEEEEE-cCCC-cEEEEEEecC
Confidence 46678888887732 55555554 3 899999888 4665 4676666654
No 29
>2kvz_A ISPE; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Listeria monocytogenes}
Probab=20.93 E-value=78 Score=22.67 Aligned_cols=32 Identities=3% Similarity=0.167 Sum_probs=25.6
Q ss_pred cceEEEEEEcCCcEEEEcCccCCCCcCCeEEeCC
Q 025347 219 QSLSFQLTASDGRTVTSNNVVPGNWQFGQTFEGG 252 (254)
Q Consensus 219 ~pl~vRiTs~~G~~v~~~~vip~~w~~g~~Y~s~ 252 (254)
.|+.|+-.+.+|+.|....++- ...|..|+..
T Consensus 7 ~~VtV~YvDe~Gn~La~~~~lt--G~vG~~Y~t~ 38 (85)
T 2kvz_A 7 NQVTVNYLDENNTSIAPSLYLS--GLFNEAYNVP 38 (85)
T ss_dssp CCEEEEEECSSSCEEEEEEEEC--CCTTCCCCCC
T ss_pred CeEEEEEECCCCCCCCCCeEEe--eeCCCcceec
Confidence 4899999999999998888775 4567777764
Done!