BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025348
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 265 bits (677), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 189/254 (74%), Gaps = 2/254 (0%)
Query: 1 MVPAILMNIFVTAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGI 60
+V A++MNI++ +NQLSDVEIDKVNKP+LPLASG++S+ G+AI +++ ++ S +G
Sbjct: 142 VVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAI--VASFSIMSFWLGW 199
Query: 61 MLRSPPLFIGLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKY 120
++ S PLF L +++G AYSI+LPLLRWK L+AA+ I+ + +++Q +++H+Q +
Sbjct: 200 IVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAFYLHIQTH 259
Query: 121 VLGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISV 180
V GRP+ FT+PL+FA AFM F++ IA KD+PD+EGDK FG+R+ V LG+++VF V
Sbjct: 260 VFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQKRVFWTCV 319
Query: 181 SMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFILWHQTRTIDLSDAKSMQSLYMFIF 240
++L MAY AIL GA+SPF+ K+++++GH +L LW + +++DLS + S YMFI+
Sbjct: 320 TLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSKTEITSCYMFIW 379
Query: 241 KLYYAEFFLIHFIR 254
KL+YAE+ L+ F++
Sbjct: 380 KLFYAEYLLLPFLK 393
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 253 bits (647), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 180/254 (70%), Gaps = 2/254 (0%)
Query: 1 MVPAILMNIFVTAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGI 60
+V A+ MNI++ +NQL D+EIDKVNKP LPLASG++S GVA+ +S S +G
Sbjct: 153 VVAALFMNIYIVGLNQLFDIEIDKVNKPTLPLASGEYSPATGVAL--VSAFAAMSFGLGW 210
Query: 61 MLRSPPLFIGLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKY 120
+ S PLF+ L +I+G AYSI+LP LRWK S ++AA+ I+ + +++Q +F+H+Q +
Sbjct: 211 AVGSQPLFLALFISFILGTAYSINLPFLRWKRSAVVAALCILAVRAVIVQLAFFLHIQTF 270
Query: 121 VLGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISV 180
V RP FT+PL+FA AFM F++ IA KD+PD+EGD+ FG+++ V LG++KVF I V
Sbjct: 271 VFRRPAVFTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIFGIKSFSVRLGQKKVFWICV 330
Query: 181 SMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFILWHQTRTIDLSDAKSMQSLYMFIF 240
+L MAY AIL GA+S L K T++GH++L ILW+++R+IDL+ ++ S YMFI+
Sbjct: 331 GLLEMAYCVAILMGATSACLWSKYATVVGHAILAAILWNRSRSIDLTSKTAITSFYMFIW 390
Query: 241 KLYYAEFFLIHFIR 254
KL+YAE+ LI +R
Sbjct: 391 KLFYAEYLLIPLVR 404
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 216 bits (549), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/254 (42%), Positives = 164/254 (64%), Gaps = 2/254 (0%)
Query: 1 MVPAILMNIFVTAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGI 60
+V I ++IF +NQL D+EIDK+NKP LPLASG S V I S++ L +
Sbjct: 159 VVAVICIHIFGVGLNQLCDIEIDKINKPDLPLASGKLSF-RNVVIITASSLIL-GLGFAW 216
Query: 61 MLRSPPLFIGLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKY 120
++ S PLF + +V +AY++DLPLLRWK P++ A+ + + +F+H+Q
Sbjct: 217 IVDSWPLFWTVFISCMVASAYNVDLPLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQTC 276
Query: 121 VLGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISV 180
V RP F +PL+F A + I+ I IA KD+PD+EGD++FG+++L + LG ++VF I V
Sbjct: 277 VFKRPTTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRVFWICV 336
Query: 181 SMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFILWHQTRTIDLSDAKSMQSLYMFIF 240
S+L M YG IL GA+SP L K++T++GH+VL +LW+ +++DL+ + S YMFI+
Sbjct: 337 SLLEMTYGVTILVGATSPILWSKIITVLGHAVLASVLWYHAKSVDLTSNVVLHSFYMFIW 396
Query: 241 KLYYAEFFLIHFIR 254
KL+ AE+FLI R
Sbjct: 397 KLHTAEYFLIPLFR 410
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 214 bits (545), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 157/254 (61%), Gaps = 2/254 (0%)
Query: 1 MVPAILMNIFVTAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGI 60
++P + + I++ +NQL D+EIDK+NKPHLP+ASG FS GV I+ + S
Sbjct: 158 VLPQLFIEIYLCGVNQLYDLEIDKINKPHLPMASGQFSFKTGVIIS--AAFLALSFGFTW 215
Query: 61 MLRSPPLFIGLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKY 120
+ S PL L+ AYSID+PLLRWK P +AA+ ++ L L YF H+Q
Sbjct: 216 ITGSWPLICNLVVIASSWTAYSIDVPLLRWKRYPFVAAMCMISTWALALPISYFHHMQTV 275
Query: 121 VLGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISV 180
VL RP+ F + L F AFM +++ +A KD+PDVEGDKE G+ + V LG+++ F I V
Sbjct: 276 VLKRPIGFPRSLGFLVAFMTFYSLGLALSKDIPDVEGDKEHGIDSFAVRLGQKRAFWICV 335
Query: 181 SMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFILWHQTRTIDLSDAKSMQSLYMFIF 240
S MA+G IL GAS K+ T +G++VL ILW+Q +++DLSD S S YMFI+
Sbjct: 336 SFFEMAFGVGILAGASCSHFWTKIFTGMGNAVLASILWYQAKSVDLSDKASTGSFYMFIW 395
Query: 241 KLYYAEFFLIHFIR 254
KL YA FFL+ IR
Sbjct: 396 KLLYAGFFLMALIR 409
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 133/257 (51%), Gaps = 19/257 (7%)
Query: 5 ILMNIFVTAINQLSDVEIDKVNKPHLPLASGDFSIGEG------VAIAVISTMTLQSVAM 58
I N ++ INQ+ D+ IDKVNKP+LP+A+GD S+ AIA + +
Sbjct: 141 ICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGLLVVGFNFGPF 200
Query: 59 GIMLRSPPLFIGLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQ 118
L S LF+G I YS+ P LR K P+ A + I + G LL F + H
Sbjct: 201 ITSLYSLGLFLGTI--------YSV--PPLRMKRFPVAAFLIIATVRGFLLNFGVY-HAT 249
Query: 119 KYVLGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSI 178
+ LG P +++ P+ F +F+ +F + IA KDLPDVEGD++F + TL LG + +
Sbjct: 250 RAALGLPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFL 309
Query: 179 SVSMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFILWHQTRTIDLSD--AKSMQSLY 236
+LL+ Y +AI P + + + H +L L QT ++ ++ +++ Y
Sbjct: 310 GSGLLLVNYVSAISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANYTKEAISGYY 369
Query: 237 MFIFKLYYAEFFLIHFI 253
FI+ L+YAE+ L F+
Sbjct: 370 RFIWNLFYAEYLLFPFL 386
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 9/250 (3%)
Query: 1 MVPAILMNIFVTAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGI 60
+V I N ++ INQ+ D+ IDKVNKP+LP+A+GD S+ + V+ S+ +
Sbjct: 130 LVALICGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQTAWLLVVLFAAAGFSI---V 186
Query: 61 MLRSPPLFIGLITWWI-VGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQK 119
+ P L + +G YS+ P R K P+ A + I + G LL F + + +
Sbjct: 187 VTNFGPFITSLYCLGLFLGTIYSV--PPFRLKRYPVAAFLIIATVRGFLLNFGVY-YATR 243
Query: 120 YVLGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSIS 179
LG +++ P+ F F+ +F + IA KDLPDVEGD+++ + TL LG + +
Sbjct: 244 AALGLTFQWSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIAFLG 303
Query: 180 VSMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFILWHQTRTIDLSD--AKSMQSLYM 237
+L+ Y AAI P + V + H+ L + QT ++ + ++ Y
Sbjct: 304 SGLLIANYVAAIAVAFLMPQAFRRTVMVPVHAALAVGIIFQTWVLEQAKYTKDAISQYYR 363
Query: 238 FIFKLYYAEF 247
FI+ L+YAE+
Sbjct: 364 FIWNLFYAEY 373
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 23/180 (12%)
Query: 13 AINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGLI 72
A N D +D VN+P P+ SG G+ IA++ MT+ S+A+G ML P G
Sbjct: 69 AANNWCDRHVDAVNEPDRPIPSGRIPGRWGLYIALL--MTVLSLAVGWMLG--PWGFGAT 124
Query: 73 TWWIVGA-AYSIDLPLLR---WKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPLEF 128
+ ++ A AYS++ L+ W G L+A + GL P+F G P F
Sbjct: 125 VFGVLAAWAYSVEPIRLKRSGWWGPGLVA----LCYEGL----PWFTGAAVLSAGAPSFF 176
Query: 129 --TKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISVSMLLMA 186
T LL+A GI + D +EGD++ G+R+LPV+LG E ++ +++ MA
Sbjct: 177 IVTVALLYAFGAHGIMTL-----NDFKALEGDRQHGVRSLPVMLGPEVAAKLACTVMAMA 231
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 40/173 (23%)
Query: 14 INQLSDVEIDKVNKPHLPLASGDFSIGE-----------GVAIAVISTMTLQSVAMGIML 62
IN + DVEID++N+P P+ +GD S+ G+AIA ++T ++A+ +
Sbjct: 54 INDVRDVEIDRINRPDRPIPAGDISLAGARAYAAALFVGGIAIATLTTTLCLAIAI---I 110
Query: 63 RSPPLFIGLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFP-YFVHVQKYV 121
S L + Y++ R K +P++ V + L G + F F ++ V
Sbjct: 111 NSVILIV-----------YAV-----RLKRTPVLGNVAVAYLAGSVFLFGGAFAGIEGLV 154
Query: 122 LGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEK 174
R L AA + IA +KD DV+GD G RTLP+I+G K
Sbjct: 155 --RNLSL-------AAITFLATIARELLKDAEDVDGDAAGGARTLPMIVGVRK 198
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGL 71
IN D EIDK+N+P PL G ++G VA+ + +A+ M+ +G+
Sbjct: 54 NTINDYFDYEIDKINRPERPLPRG--AMGRKVALYYSMLLFAVGLALAYMINIYAFILGV 111
Query: 72 ITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPLEFTKP 131
I + + + + WK PL V +++ GL P + V LG
Sbjct: 112 IAY--------VTMFIYAWKLKPL-PFVGNIVVAGLTGATPLYGAVAVEHLG-----LAG 157
Query: 132 LLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISV 180
L AF+ N+A +KD+ DVEGD G +TLP+I GK++ + V
Sbjct: 158 YLAICAFL--VNVAREVIKDIEDVEGDMAKGAKTLPIIWGKKRAAYVGV 204
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 40/185 (21%)
Query: 14 INQLSDVEIDKVNKPHLPLASGDFS-----------IGEGVAIAVISTMTLQSVAMGIML 62
+N D+EIDKVN+P P+ SG S GVA A + + ++A+
Sbjct: 54 LNDYFDLEIDKVNRPDRPIPSGKVSPKGAVVWAGILFAAGVAAACFTNIWCLAIAL---- 109
Query: 63 RSPPLFIGLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYF-VHVQKYV 121
+ ++ I A ++KG P + +++ L+G + F F V + ++
Sbjct: 110 ------VNVVLLIIYAA---------KFKGIPFLGNLSVAYLSGSIFLFGGFLVGPESFL 154
Query: 122 LGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISVS 181
+ PL FA F G +A +KD D+EGD+ G RTLP+ +G K ++V
Sbjct: 155 VMLPL-------FAITFFG--TLARELLKDAEDIEGDRLGGARTLPMQIGVRKTSVLAVI 205
Query: 182 MLLMA 186
+L A
Sbjct: 206 FVLFA 210
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 50/191 (26%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGD-------------FSIGEGVAIAVISTMTLQSVAM 58
AIN D E+D VN+P P+ SG F++G G+A VI+ M L A+
Sbjct: 50 NAINDYFDAEVDAVNRPDRPIPSGRVSPRSARMFALGCFAVGVGMAT-VINRMCLAIAAL 108
Query: 59 GIMLRSPPLFIGLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQ 118
+L + L +W R KG+PL+ V + L G F V
Sbjct: 109 NSVL------LYLYSW--------------RLKGTPLIGNVMVSYLVGSCFLFGAAVG-- 146
Query: 119 KYVLGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGK------ 172
RP P ++ + N+ +KDL DVEGD GL+TLP+ G+
Sbjct: 147 ----QRP----APAVWLFLLAFLANLVREILKDLEDVEGDAALGLKTLPIAYGEGVALRV 198
Query: 173 EKVFSISVSML 183
VF+I++++L
Sbjct: 199 ATVFAIALAVL 209
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 38/202 (18%)
Query: 4 AILMNIFVTA----INQLSDVEIDKVNKPHLPLASGDFSIGEGVAI---------AVIST 50
A+ IF TA IN D IDK+N+P P+ G +I E AI AV+ST
Sbjct: 48 AVAATIFATAAGNAINDYFDRAIDKINRPMRPIPRG--AISERGAIVFSGFLFVAAVVST 105
Query: 51 MTLQSVAMGIMLRSPPLFIGLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQ 110
L +A+ + L + + L+ + + +KG P + + L G
Sbjct: 106 SVLPLIAIVLALMN---LLALVAYTEL------------FKGLPGVGNAIVAYLTGSTFL 150
Query: 111 FPYFVHVQKYVLGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVIL 170
F +GR +F +LF A + I +KD+ D++GD++ GL+TLP+++
Sbjct: 151 F------GAAAIGRITDFGVVVLFILAALATATREI--IKDIEDLDGDRKEGLQTLPIVI 202
Query: 171 GKEKVFSISVSMLLMAYGAAIL 192
G + ++ +LL+A A+I+
Sbjct: 203 GVTPAYRVATGVLLVAVIASIV 224
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 33/231 (14%)
Query: 14 INQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSP----PLFI 69
IN + D+E+DK+NKP PL SG +A+ + ++ A+G+++ P P
Sbjct: 55 INDVYDIEVDKINKPERPLPSGR------IAVNIARRFSIVLFAVGLIISIPLGLIPFGF 108
Query: 70 GLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPLEFT 129
LIT ++ Y+ L L G+ ++A + L Y +LG F
Sbjct: 109 ALITIVLL-YEYARSLKKLGLVGNFIVALTS-------ALSAYYGGLASGSLLG---NFI 157
Query: 130 KPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISVSMLLMAYGA 189
P ++ + F ++ FVK + D+EGDK G+ TL V LG++ + I+ +L G
Sbjct: 158 IPTIY----IFFFTLSREFVKGIEDIEGDKRNGVNTLAVKLGEKSTWIIAKIIL----GI 209
Query: 190 AILTGASSPFLLCKLVTMIG----HSVLGFILWHQTRTIDLSDAKSMQSLY 236
I T FL ++ +IG +L +IL + A+S+ +Y
Sbjct: 210 LIFTSPLPYFLGFNVIYLIGILALDVLLVYILILHNTIESATKARSLMKIY 260
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGL 71
IN D EID++N P+ P+ SG + + ++I + L S+ +G ++ S I +
Sbjct: 49 NTINDYYDYEIDRINAPNRPIPSGKIELKRALYYSLI--LFLVSIILGFII-SLENGIVV 105
Query: 72 ITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPLEFTKP 131
I I+ Y+ DL K + + + IL GL F + + LG L F
Sbjct: 106 ILCTILMIIYAYDL-----KQRCFIGNLCVAILTGLTFVFGGLI-TKDVNLGFILGF--- 156
Query: 132 LLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISV 180
F + ++ +KD+ D+EGDK+ TLP+I G +K ++V
Sbjct: 157 ------FAFLMTLSREIIKDIEDIEGDKKEDAHTLPIIYGTKKAVMLAV 199
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 38/173 (21%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGL 71
IN DVEIDK+N+P+ P+ G + V+ FIGL
Sbjct: 54 NTINDYFDVEIDKINRPNRPIPRGAITRKAAFYYGVLQ-----------------YFIGL 96
Query: 72 ITWWIVG--------AAYSIDLPLLRWKGSPL--MAAVTIMILNGLLLQFPYFVHVQKYV 121
I ++G AY + + WK PL + VT+ +L P + V
Sbjct: 97 IIALLLGWSAFLFALGAYFLTF-VYAWKLKPLPFIGNVTVALLTA---ATPIYGAVG--- 149
Query: 122 LGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEK 174
+GR ++ L A + N++ +KD+ D EGDK G RTLP+++GK+K
Sbjct: 150 VGR-IDLAGYLAICAFLV---NVSREIMKDIEDFEGDKRLGARTLPIMIGKKK 198
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 15/172 (8%)
Query: 14 INQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGLIT 73
IN + D+EIDK+NKP+ PL SG I +++++ + L + + ++L I L+T
Sbjct: 56 INDVFDIEIDKINKPNRPLPSGRIKISRARSLSIV--LFLVGIVLSVLLNIYAFIIALLT 113
Query: 74 WWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPLEFTKPLL 133
+ Y+ DL K L+ + + + + L + + + R L T +
Sbjct: 114 VLAL-YYYAKDL-----KKQGLVGNLIVALTSALSAFYGGLAFFEGSWVIRTLIPTLYIF 167
Query: 134 FAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISVSMLLM 185
F F + FVK + DV+GD G++TL V +G EK + IS +L++
Sbjct: 168 F-------FTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEKTWFISKIILVI 212
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGL 71
IN D EID++N+P PL G A+ ++ L +V + + L I L
Sbjct: 54 NTINDYFDYEIDRINRPERPLPRGAMD----RRTALWYSLFLFAVGLAL-----ALLISL 104
Query: 72 ITWWIVGAAYSIDLPLLRWKGSPL--MAAVTIMILNGLLLQFPYF--VHVQKYVLGRPLE 127
+ AY I + L WK PL + + + L G+ P + + V K L L
Sbjct: 105 KAFAFALLAY-ITMFLYAWKLKPLPFIGNIAVAALTGVT---PLYGAIAVGKIGLAGTLA 160
Query: 128 FTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEK 174
AF+ N+A VKD+ DVEGD + G +TLP+ILG+ K
Sbjct: 161 VC-------AFL--VNVAREIVKDIEDVEGDLKKGAKTLPIILGRRK 198
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGL 71
IN DVEID+VN+P+ P+ G + A++ M +G+ L F+G+
Sbjct: 54 NTINDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYM------LGLALAR---FLGV 104
Query: 72 ITWWIVGAAYSIDLPLLRWKGSPL--MAAVTIMILNGLLLQFPYFVHVQKYVLGRPLEFT 129
AY++ + WK PL + V + +L P + LG
Sbjct: 105 EALLFALGAYALTF-IYAWKLKPLPFIGNVAVALLTA---ATPIY-----GALGVGRVGL 155
Query: 130 KPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSIS 179
L AF+ N++ +KD+ D+EGD + G +TLP+I+GK + IS
Sbjct: 156 AGYLAICAFL--VNVSREIMKDIEDIEGDMKMGAKTLPIIIGKRRAAMIS 203
>sp|Q9UWY6|DGGGP_SULSO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=ubiA-2 PE=1 SV=1
Length = 282
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 17/167 (10%)
Query: 14 INQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGLIT 73
IN + DVEIDK+NKP+ P+ SG S+ + A+++ + + +A+ I+L L I L+T
Sbjct: 56 INDVYDVEIDKINKPYRPIPSGKISVNKAKALSI--ALFIIGIALSILLNIYALVIALVT 113
Query: 74 WWIVG-AAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPLEFTKPL 132
+G Y+ DL + G+ L+A T + + ++ + + L P
Sbjct: 114 --AIGLIYYAKDLKKTGFYGNLLVATTTALSI--------FYGGLAFFSDNWLLRIIIPT 163
Query: 133 LFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSIS 179
L+A I I VK + D GD ++TL LG K + I+
Sbjct: 164 LYAFFLTLIREI----VKGIEDYNGDSLNNVKTLATTLGINKSWRIA 206
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 14 INQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIM-LRSPPLFIGLI 72
IN D EIDK+N+P+ PL G S IA++ ++L VA+ I L + FI
Sbjct: 56 INDYFDYEIDKINRPNRPLPRGALSKN----IALVYGISLGGVAILIAYLINFEAFI--- 108
Query: 73 TWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYF--VHVQKYVLGRPLEFTK 130
+ +GA + L + K P + + + L G+ P + + V K L L
Sbjct: 109 --FALGAYLLMYLYARKLKPQPFIGNLVVATLTGIT---PIYGAIAVGKIGLAGYLALC- 162
Query: 131 PLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISV 180
AF+ N+A KD+ D+EGDK G +TLP++ G E I V
Sbjct: 163 ------AFL--VNVAREIFKDIEDIEGDKAQGAKTLPIVWGIESSSKIGV 204
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 15 NQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGLITW 74
N D EIDK+N+P+ PL G S + A L A+G +L F+ + +
Sbjct: 57 NDYFDYEIDKINRPNRPLPRGAMSRRAALYYA------LLQYAIGSIL---AYFLNIRAF 107
Query: 75 WIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPLEFTKPLLF 134
AY + L WK PL I + L P + + +G L
Sbjct: 108 VFATIAYFLTF-LYGWKLKPLPLVGNITV-AALTAATPIYGAIGVGRIG-----LAGYLA 160
Query: 135 AAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEK 174
AF+ N++ +KD+ D+EGDK G RTLP+I+G++K
Sbjct: 161 ICAFL--VNVSREIMKDIEDIEGDKALGARTLPIIIGEKK 198
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGL 71
AIN D EID +NKP+ P+ SG S E + I + ++L +A+ I F+G
Sbjct: 53 NAINDYYDAEIDAINKPYRPIPSGRISKREALNIYI--ALSLFGIALSI-------FLGF 103
Query: 72 ITWWIVGAAYSID-LPLLRW---KGSPLMAAVTIMILNGLLL-QFPYFVHVQKYVLGRPL 126
I + IV A+S+ RW G P A V++ + L+ K ++ +
Sbjct: 104 IEFLIV-TAFSLSWYAYARWLKRTGVPGNALVSLGVAFTLIFGSLAAGNLTNKVIIFSSV 162
Query: 127 EFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEK 174
FT N+ FVK + D+ GD+ G+RT+ V +G ++
Sbjct: 163 AFTS------------NLIREFVKAVEDLPGDRAHGVRTIAVRIGVKR 198
>sp|P26170|BCHG_RHOCB Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchG PE=4
SV=1
Length = 304
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 10/175 (5%)
Query: 13 AINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGLI 72
A N D +D +N+PH P+ SG G+ IA+ M+L S+ +G L S L+
Sbjct: 70 AANDWCDRHVDAINEPHRPIPSGRIPGLWGLYIAI--AMSLLSLVVGWQLGSWGFVATLL 127
Query: 73 TWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQ-FPYFVHVQKYVLGRPLEFTKP 131
V AA++ + +R K S L GL + P+ + P
Sbjct: 128 G---VAAAWAYSVEPIRLKRSGWWGPG----LVGLAYEGLPWITGAAVLLATADTSPGFP 180
Query: 132 LLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISVSMLLMA 186
++ A + I + D +EGD++ G+++LP + G E I+ +++ +A
Sbjct: 181 IVMMATLYALGAHGIMTINDFKAIEGDRKLGIKSLPAVYGPEVAAKIACTVMGLA 235
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGL 71
+N D+EIDKVNKP P+ SG S+ + ++ +T ++A L +P G+
Sbjct: 60 NGLNDYFDIEIDKVNKPSRPIPSGKISLKSALYFSLFLFITGITLAF---LVNP--LCGI 114
Query: 72 ITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPLEFTKP 131
I + + + L K +P ++ L G F V G
Sbjct: 115 IALF---NSMVLILYAQSLKRTPFFGNASVGYLTGSTFLF------GGAVFGMAGLQALV 165
Query: 132 LLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISVSMLLMAYGAAI 191
+LF A + IA VKD+ D+ GDK+ G RTLP+++G +K S + A+G
Sbjct: 166 VLFLLATLA--TIAREIVKDVEDIVGDKKDGARTLPILIGAKK-----ASYIAAAFGFTA 218
Query: 192 LTGASSPFL 200
+ + P+L
Sbjct: 219 MLASPVPYL 227
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 26/177 (14%)
Query: 14 INQLSDVEIDKVNKPHLPLASGDFSIG-EGV-AIAVISTMTLQSVAMGIMLRSPPLFIGL 71
IN D EID +N+P P+ SG S G GV +I + + +L +G++ P L +
Sbjct: 51 INDYFDHEIDAINRPERPIPSGRISRGVAGVYSIILFALASLMGFYLGLL---PGLVVVS 107
Query: 72 ITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFV--HVQKYVLGRPLEFT 129
+ +V A+ R K L+ +TI L GL F V V+ +L
Sbjct: 108 SSLLMVYYAW-------RLKKRCLVGNITISFLTGLSFVFGGIVLGEVRASIL------- 153
Query: 130 KPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISVSMLLMA 186
L F A M +A VKD+ DVEGD+ G TLP+ G ++ S +L+A
Sbjct: 154 --LGFYAFLM---TMAREIVKDMEDVEGDRAEGATTLPITHGMRISGVLAASFMLIA 205
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 74/179 (41%), Gaps = 26/179 (14%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGL 71
AIN D EID VN+P P+ SG S + + SVA+ I + L GL
Sbjct: 51 NAINDYFDREIDAVNRPDRPIPSGRISPRAAL---------IWSVALFI---AGCLIAGL 98
Query: 72 ITWWIVGAAYSIDLPLL----RWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPLE 127
I + A L+ R KG P+ + I L G F P
Sbjct: 99 INQSCLALALLNSFVLIIYAARLKGLPVAGNIAISYLTGTTFLFGGLA-------ASPSS 151
Query: 128 FTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISVSMLLMA 186
T F + + ++ VKD+ D+ GD G +TLP +GK K F ++ +L++A
Sbjct: 152 ITA---FLSILSALATLSREIVKDIEDLPGDLAHGAKTLPAFIGKRKSFVLASLVLIVA 207
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 26/167 (15%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGV--AIAVISTMTLQSVAMGIMLRSPPLFI 69
IN D EIDK+N+P PL G S + ++A+ +T GI+L FI
Sbjct: 54 NTINDYFDYEIDKINRPERPLPRGAMSRKAALWYSVALFAT--------GIVL---AWFI 102
Query: 70 GLITWWIVGAAYSIDLPLLRWKGSPL--MAAVTIMILNGLLLQFPYFVHVQKYVLGRPLE 127
+ + + AY + + + WK P+ + V + L G P + + +G L
Sbjct: 103 NIWDFLLAIVAY-VTMFIYAWKLKPMPFIGNVVVASLTG---ATPLYGAIAVGEIG--LA 156
Query: 128 FTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEK 174
T L AF+ N+A +KD+ D+EGD G +TLP+++G+++
Sbjct: 157 GTLAL---CAFL--VNVAREVIKDIEDIEGDMAKGAKTLPILIGRKR 198
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGV--AIAVISTMTLQSVAMGIMLRSPPLFI 69
AIN DV ID +N+P P+ SG + E + + + + TL + ++ + LF
Sbjct: 68 NAINDYFDVRIDSINRPDRPIPSGRMKLKEALYFSYTLFALGTLLAFSINPICGVIALFN 127
Query: 70 GLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPLEFT 129
L+ + Y+ L KG+PL+ ++I L G F V G LE
Sbjct: 128 SLVLIF-----YAKTL-----KGTPLLGNLSIGYLTGSSFLF------GASVFG--LEGL 169
Query: 130 KPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEK 174
K L + A VKD+ D+EGDK G TLP+ +G +K
Sbjct: 170 KALFVLFLLAALAITAREIVKDIEDMEGDKMEGADTLPLRVGAKK 214
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 10 FVTAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFI 69
F A+N + D+EIDK+NKP+ PL S S+ + + ++ +++ M+ I
Sbjct: 55 FGNALNDIQDIEIDKINKPNRPLPSNKISLKSATIFSYLLMISGIIISLFNMICFAIALI 114
Query: 70 GLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPLEFT 129
I ++ ++K + ++ + + L G + F +G +E T
Sbjct: 115 NSIVLYLYAK---------KYKRNKIIGNLIVAYLTGSIFIF------GGASVGN-VEIT 158
Query: 130 KPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISVSMLLMA 186
+LF A ++ I +KD D++GDK G+ +LP+ GK +F +++ LL +
Sbjct: 159 -LILFLCALFATWSREI--IKDYEDLDGDKSEGVISLPIKYGKNSIF-VAIGFLLCS 211
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 97/241 (40%), Gaps = 70/241 (29%)
Query: 1 MVPAILMNIFVTAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVI------------ 48
M+ + + IN D +ID +N+P+ P+ SG S E + +
Sbjct: 141 MMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGIL 200
Query: 49 ------STMTLQSVAMGIMLRS-----PPLFIGLITW---WIVGAAYSIDLPLLRWKGSP 94
+T T+ +A+G L S PPL + W + +GA+Y I LP W G
Sbjct: 201 DVWAGHTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASY-ISLPW--WAGQA 257
Query: 95 LMAAVT--IMILNGLLLQFPYFVHVQKYVLGRPLEFTKPLLFAAAFMGIFNIAIAFVKDL 152
L +T +++L LL++ A +GI A V D
Sbjct: 258 LFGTLTPDVVVLT--------------------------LLYSIAGLGI-----AIVNDF 286
Query: 153 PDVEGDKEFGLRTLPVILGKEK-----VFSISVSMLLMAYGAAILTGASSPFLLCKLVTM 207
VEGD+ GL++LPV G E V +I ++ L + A L + P+ LV +
Sbjct: 287 KSVEGDRALGLQSLPVAFGTETAKWICVGAIDITQLSV---AGYLLASGKPYYALALVAL 343
Query: 208 I 208
I
Sbjct: 344 I 344
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 27/168 (16%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGL 71
AIN D +ID +N+P P+ G S A++ ++ L +VA+ + L P
Sbjct: 54 NAINDYFDRDIDAINEPDRPIPRGAVSPRG----ALVYSVALFAVAVVLTLLLP------ 103
Query: 72 ITWWIVGAAYSIDLPLLR-----WKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPL 126
W+ A +I+L L +KG P + + L G F++ V G
Sbjct: 104 ---WLAIAIAAINLVALVAYTEVFKGLPGVGNALVAYLTG-----STFLYGGAAVGGDLA 155
Query: 127 EFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEK 174
+LFA A +A VKD+ D++GD+ GLRTLP+++G+ +
Sbjct: 156 AVV--VLFALA--ACATMAREIVKDVEDIDGDRAEGLRTLPIVIGERR 199
>sp|A5ULR8|DGGGP_METS3 Digeranylgeranylglyceryl phosphate synthase OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0941
PE=3 SV=1
Length = 283
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGL 71
IN D +ID +NKP P+ SG S+ A + + + + +G ++ L
Sbjct: 49 NVINDYFDYKIDLINKPQRPIPSGRISLDNAKNYAYL--LFILAAIVGFLISC------L 100
Query: 72 ITWWI-----VGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPL 126
+ WI + + + L + K +PL+ +T+ + GL F Y L
Sbjct: 101 VDTWIPCTIVIFSDIILYLYAYKLKSTPLIGNLTVGFMTGLCFIF------AGYTFNEGL 154
Query: 127 EFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKE 173
+ L A F I A KD+ D+EGD G +T P++ G +
Sbjct: 155 IIYESYLLAF-FALIMTTAREITKDIEDMEGDMAEGAKTFPILYGPK 200
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 30/182 (16%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGV-------AIAVISTMTLQSVAMGIMLRS 64
AIN D++ID +N+P P+ SG E A+ + ++ S+ I L +
Sbjct: 68 NAINDYFDIKIDSINRPERPIPSGRVKAKEAFYFSYLLFALGTLIAFSINSICGSIALFN 127
Query: 65 PPLFIGLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGR 124
L I L KG+PL+ ++I L G + F + G
Sbjct: 128 SLLLI---------------LYAKTLKGTPLLGNLSIGYLTGSVFLF------GASIFGF 166
Query: 125 PLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISVSMLL 184
+LF A + I A VKD+ D+EGD G TLP+ +G +K ++V L
Sbjct: 167 GGIKALSVLFLLAALAI--TAREIVKDIEDMEGDSLEGADTLPLRIGAKKAGYLAVLTGL 224
Query: 185 MA 186
+A
Sbjct: 225 LA 226
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 73/202 (36%), Gaps = 62/202 (30%)
Query: 10 FVTAINQLSDVEIDKVNKPHLPLASGDFSIGE-----------------------GVAIA 46
+ IN D +ID +N+P+ P+ SG S E G
Sbjct: 139 YTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLDVWAGHDFP 198
Query: 47 VISTMTLQSVAMGIMLRSPPLFIGLITW---WIVGAAYSIDLPLLRWKGSPLMAAVT--I 101
+I + + + + +PPL + W + +GA+Y I LP W G L +T I
Sbjct: 199 IIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASY-IGLPW--WAGQALFGTLTPDI 255
Query: 102 MILNGLLLQFPYFVHVQKYVLGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEF 161
++L L I + IA V D VEGD+
Sbjct: 256 VVLTSL-------------------------------YSIAGLGIAIVNDFKSVEGDRAL 284
Query: 162 GLRTLPVILGKEKVFSISVSML 183
GL++LPV G E I V +
Sbjct: 285 GLQSLPVAFGMETAKWICVGAI 306
>sp|Q9HRP0|DGGGP_HALSA Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_0610G PE=3 SV=2
Length = 276
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 73/188 (38%), Gaps = 64/188 (34%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGL 71
AIN D E+D++N P + G S +A +V+ LF+G
Sbjct: 55 NAINDYFDREVDRINDPDRAIPRGAVSPRGALAYSVV------------------LFVGA 96
Query: 72 ITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILN--GLLLQFPYFVHVQKYVLGRPLEFT 129
AA + LP+L AV I LN GLL +Y+ GRP
Sbjct: 97 -------AALAATLPVL---------AVCIAALNLAGLL-------TYTQYLKGRPGAGN 133
Query: 130 --------KPLLFAAAFMG-------------IFNIAIAFVKDLPDVEGDKEFGLRTLPV 168
+F AA +G + A +KD+ D+ GD+ GLRTLPV
Sbjct: 134 ALVAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREVIKDVEDLAGDRAAGLRTLPV 193
Query: 169 ILGKEKVF 176
++G ++
Sbjct: 194 VVGHQRAL 201
>sp|B0R3S1|DGGGP_HALS3 Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE_1921R
PE=3 SV=1
Length = 276
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 73/188 (38%), Gaps = 64/188 (34%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFIGL 71
AIN D E+D++N P + G S +A +V+ LF+G
Sbjct: 55 NAINDYFDREVDRINDPDRAIPRGAVSPRGALAYSVV------------------LFVGA 96
Query: 72 ITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILN--GLLLQFPYFVHVQKYVLGRPLEFT 129
AA + LP+L AV I LN GLL +Y+ GRP
Sbjct: 97 -------AALAATLPVL---------AVCIAALNLAGLL-------TYTQYLKGRPGAGN 133
Query: 130 --------KPLLFAAAFMG-------------IFNIAIAFVKDLPDVEGDKEFGLRTLPV 168
+F AA +G + A +KD+ D+ GD+ GLRTLPV
Sbjct: 134 ALVAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREVIKDVEDLAGDRAAGLRTLPV 193
Query: 169 ILGKEKVF 176
++G ++
Sbjct: 194 VVGHQRAL 201
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 76/202 (37%), Gaps = 62/202 (30%)
Query: 10 FVTAINQLSDVEIDKVNKPHLPLASGDFSIGE-----------------------GVAIA 46
+ IN D +ID +N+P+ P+ SG S E G
Sbjct: 141 YTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALLDIWAGHDFP 200
Query: 47 VISTMTLQSVAMGIMLRSPPLFIGLITW---WIVGAAYSIDLPLLRWKGSPLMAAVT--I 101
+I + L + + +PPL + W + +GA+Y I LP W G L +T I
Sbjct: 201 IIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASY-IGLPW--WAGQALFGTLTPDI 257
Query: 102 MILNGLLLQFPYFVHVQKYVLGRPLEFTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEF 161
++L L++ A +G IA V D +EGD+
Sbjct: 258 VVLT--------------------------CLYSIAGLG-----IAIVNDFKSIEGDRTL 286
Query: 162 GLRTLPVILGKEKVFSISVSML 183
GL++LPV G E I V +
Sbjct: 287 GLQSLPVAFGMETAKWICVGAI 308
>sp|Q2FN44|DGGGP_METHJ Digeranylgeranylglyceryl phosphate synthase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_0625 PE=3 SV=1
Length = 280
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 49/175 (28%)
Query: 14 INQLSDVEIDKVNKPHLPLASGD-------------FSIGEGVAIAVISTMTLQSVAMGI 60
IN D EID +N+P P+ SG F IG G+AI + + + L +AMG
Sbjct: 54 INDYYDKEIDAINQPDRPIPSGQIIPGHALMYAILLFLIGNGIAI-LFTPLPLAGIAMG- 111
Query: 61 MLRSPPLFIGLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKY 120
+ W+ Y+ L K +PL+ +++ ++ +
Sbjct: 112 ---------NSVILWL----YASFL-----KKTPLIGNISV-----------SYLAASIF 142
Query: 121 VLGRPLEFTKPLL----FAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILG 171
+ G ++ T+ ++ A A G+ +A +KD D+ GD E G RT P++ G
Sbjct: 143 LFGGAIQGTQGIISVFPIAGATWGVM-LARELIKDAEDMPGDNEHGARTFPLLYG 196
>sp|Q8TS44|DGGGP_METAC Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_0961 PE=3 SV=1
Length = 289
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 12 TAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVI--STMTLQSVAMGIMLRSPPLFI 69
AIN D++ID +N+P P+ SG E + + + + TL + ++ + LF
Sbjct: 68 NAINDYFDIKIDSINRPERPIPSGRVQAKEALYFSYLLFAAGTLLAFSINSICGLIALFN 127
Query: 70 GLITWWIVGAAYSIDLPLLRWKGSPLMAAVTIMILNGLLLQFPYFVHVQKYVLGRPLEFT 129
L+ Y+ L KG+PL+ ++I L G + F V G LE
Sbjct: 128 SLLLIL-----YAKTL-----KGTPLLGNLSIGYLTGSVFLF------GASVFG--LEGL 169
Query: 130 KPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVFSISVSMLLMA 186
K L + A VKD+ D+EGD+ TLP+ +G +K ++V + L+A
Sbjct: 170 KTLFVLFLLAALAITAREIVKDIEDMEGDRLEDADTLPLRIGAKKAGYLAVLIGLLA 226
>sp|A9A8Y7|DGGGP_METM6 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0995
PE=3 SV=1
Length = 278
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 10 FVTAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFI 69
F A+N + D++IDK+NKP P+ S S+GE A I + L + + I + + F+
Sbjct: 53 FGNALNDIYDLKIDKINKPKRPIPSKRISLGE----ARIFSYLLVVMGLIISMFNITCFL 108
Query: 70 GLITWWIVGAAYSIDLPLLRWKGSPLMAAVT--IMILNGLLLQFPYFVHVQKYVLGRPLE 127
+ IV Y+ + G+ ++A +T + I G+ + ++
Sbjct: 109 MAVLNSIVLQQYASTYKKNKIVGNLIVAYLTGSVFIFGGIAVG--------------NID 154
Query: 128 FTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVF 176
T +LF A +++ I +KD D+EGD + + ++P+ G++ ++
Sbjct: 155 VT-IMLFLCALFAMWSREI--IKDYEDIEGDIKEKVISIPIKCGEKSIY 200
>sp|A1JJJ0|MRAY_YERE8 Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=mraY PE=3 SV=1
Length = 360
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 158 DKEFGLRTLPVILGKEKVFSISVSMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFIL 217
+ F R P + G +FSI++S+L+ AY S+P++ C L +IG+ ++GFI
Sbjct: 63 ESHFSKRGTPTMGGLMILFSITISVLMWAY-------PSNPYVWCVLFILIGYGIVGFI- 114
Query: 218 WHQTRTIDLSDAKSMQSLYMFIFK 241
R + D K + + + + ++
Sbjct: 115 -DDYRKVVRKDTKGLIARWKYFWQ 137
>sp|A6VHU1|DGGGP_METM7 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0950
PE=3 SV=1
Length = 278
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 10 FVTAINQLSDVEIDKVNKPHLPLASGDFSIGEGVAIAVISTMTLQSVAMGIMLRSPPLFI 69
F A+N + D++IDK+NKP P+ S S+ + A + + L V + I L + F+
Sbjct: 53 FGNALNDIYDLKIDKINKPERPIPSKRLSLTD----ARVFSYLLVFVGLFISLFNMACFL 108
Query: 70 GLITWWIVGAAYSIDLPLLRWKGSPLMAAVT--IMILNGLLLQFPYFVHVQKYVLGRPLE 127
+ IV Y+ + G+ ++A +T + I G+ + ++
Sbjct: 109 MAVLNSIVLQQYASTYKKNKIIGNLIVAYLTGSVFIFGGIAVG--------------NID 154
Query: 128 FTKPLLFAAAFMGIFNIAIAFVKDLPDVEGDKEFGLRTLPVILGKEKVF 176
T +LF A +++ I +KD D+EGD + + ++P+ G++ V+
Sbjct: 155 VT-IMLFLCALFAMWSREI--IKDYEDIEGDIQEKVISIPIKCGEKSVY 200
>sp|B1JK84|MRAY_YERPY Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=mraY
PE=3 SV=1
Length = 360
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 158 DKEFGLRTLPVILGKEKVFSISVSMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFIL 217
+ F R P + G +FSI++S+L+ AY S+P++ C L +IG+ ++GFI
Sbjct: 63 ESHFSKRGTPTMGGLMILFSITISVLMWAY-------PSNPYVWCVLFILIGYGIVGFI- 114
Query: 218 WHQTRTIDLSDAKSMQSLYMFIFK 241
R + + K + + + + ++
Sbjct: 115 -DDYRKVVRKNTKGLIARWKYFWQ 137
>sp|Q66EK8|MRAY_YERPS Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=mraY
PE=3 SV=1
Length = 360
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 158 DKEFGLRTLPVILGKEKVFSISVSMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFIL 217
+ F R P + G +FSI++S+L+ AY S+P++ C L +IG+ ++GFI
Sbjct: 63 ESHFSKRGTPTMGGLMILFSITISVLMWAY-------PSNPYVWCVLFILIGYGIVGFI- 114
Query: 218 WHQTRTIDLSDAKSMQSLYMFIFK 241
R + + K + + + + ++
Sbjct: 115 -DDYRKVVRKNTKGLIARWKYFWQ 137
>sp|A4TQ86|MRAY_YERPP Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Yersinia
pestis (strain Pestoides F) GN=mraY PE=3 SV=1
Length = 360
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 158 DKEFGLRTLPVILGKEKVFSISVSMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFIL 217
+ F R P + G +FSI++S+L+ AY S+P++ C L +IG+ ++GFI
Sbjct: 63 ESHFSKRGTPTMGGLMILFSITISVLMWAY-------PSNPYVWCVLFILIGYGIVGFI- 114
Query: 218 WHQTRTIDLSDAKSMQSLYMFIFK 241
R + + K + + + + ++
Sbjct: 115 -DDYRKVVRKNTKGLIARWKYFWQ 137
>sp|Q1CMN0|MRAY_YERPN Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Yersinia
pestis bv. Antiqua (strain Nepal516) GN=mraY PE=3 SV=1
Length = 360
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 158 DKEFGLRTLPVILGKEKVFSISVSMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFIL 217
+ F R P + G +FSI++S+L+ AY S+P++ C L +IG+ ++GFI
Sbjct: 63 ESHFSKRGTPTMGGLMILFSITISVLMWAY-------PSNPYVWCVLFILIGYGIVGFI- 114
Query: 218 WHQTRTIDLSDAKSMQSLYMFIFK 241
R + + K + + + + ++
Sbjct: 115 -DDYRKVVRKNTKGLIARWKYFWQ 137
>sp|A9R127|MRAY_YERPG Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Yersinia
pestis bv. Antiqua (strain Angola) GN=mraY PE=3 SV=1
Length = 360
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 158 DKEFGLRTLPVILGKEKVFSISVSMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFIL 217
+ F R P + G +FSI++S+L+ AY S+P++ C L +IG+ ++GFI
Sbjct: 63 ESHFSKRGTPTMGGLMILFSITISVLMWAY-------PSNPYVWCVLFILIGYGIVGFI- 114
Query: 218 WHQTRTIDLSDAKSMQSLYMFIFK 241
R + + K + + + + ++
Sbjct: 115 -DDYRKVVRKNTKGLIARWKYFWQ 137
>sp|Q8ZIF2|MRAY_YERPE Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Yersinia
pestis GN=mraY PE=3 SV=1
Length = 360
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 158 DKEFGLRTLPVILGKEKVFSISVSMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFIL 217
+ F R P + G +FSI++S+L+ AY S+P++ C L +IG+ ++GFI
Sbjct: 63 ESHFSKRGTPTMGGLMILFSITISVLMWAY-------PSNPYVWCVLFILIGYGIVGFI- 114
Query: 218 WHQTRTIDLSDAKSMQSLYMFIFK 241
R + + K + + + + ++
Sbjct: 115 -DDYRKVVRKNTKGLIARWKYFWQ 137
>sp|B2K4E3|MRAY_YERPB Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=mraY
PE=3 SV=1
Length = 360
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 158 DKEFGLRTLPVILGKEKVFSISVSMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFIL 217
+ F R P + G +FSI++S+L+ AY S+P++ C L +IG+ ++GFI
Sbjct: 63 ESHFSKRGTPTMGGLMILFSITISVLMWAY-------PSNPYVWCVLFILIGYGIVGFI- 114
Query: 218 WHQTRTIDLSDAKSMQSLYMFIFK 241
R + + K + + + + ++
Sbjct: 115 -DDYRKVVRKNTKGLIARWKYFWQ 137
>sp|Q1C211|MRAY_YERPA Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Yersinia
pestis bv. Antiqua (strain Antiqua) GN=mraY PE=3 SV=1
Length = 360
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 158 DKEFGLRTLPVILGKEKVFSISVSMLLMAYGAAILTGASSPFLLCKLVTMIGHSVLGFIL 217
+ F R P + G +FSI++S+L+ AY S+P++ C L +IG+ ++GFI
Sbjct: 63 ESHFSKRGTPTMGGLMILFSITISVLMWAY-------PSNPYVWCVLFILIGYGIVGFI- 114
Query: 218 WHQTRTIDLSDAKSMQSLYMFIFK 241
R + + K + + + + ++
Sbjct: 115 -DDYRKVVRKNTKGLIARWKYFWQ 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.144 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,198,943
Number of Sequences: 539616
Number of extensions: 3410763
Number of successful extensions: 9757
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 9661
Number of HSP's gapped (non-prelim): 129
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)