Your job contains 1 sequence.
>025354
MPLSTGCLTSLVVHLYVCQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR
HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRS
VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRN
RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI
IEEARKRQAAQAAA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025354
(254 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2827612 - symbol:AT2G17360 species:3702 "Arabi... 1111 1.4e-112 1
TAIR|locus:2169339 - symbol:AT5G07090 species:3702 "Arabi... 1111 1.4e-112 1
TAIR|locus:2171198 - symbol:AT5G58420 species:3702 "Arabi... 1105 5.9e-112 1
UNIPROTKB|P79103 - symbol:RPS4 "40S ribosomal protein S4"... 860 5.4e-86 1
UNIPROTKB|F2Z4Q1 - symbol:RPS4X "Uncharacterized protein"... 860 5.4e-86 1
UNIPROTKB|J9P5V0 - symbol:J9P5V0 "Uncharacterized protein... 860 5.4e-86 1
UNIPROTKB|P62701 - symbol:RPS4X "40S ribosomal protein S4... 860 5.4e-86 1
UNIPROTKB|F1RQ91 - symbol:RPS4X "Uncharacterized protein"... 860 5.4e-86 1
UNIPROTKB|P62704 - symbol:RPS4X "40S ribosomal protein S4... 860 5.4e-86 1
UNIPROTKB|P62705 - symbol:RPS4X "40S ribosomal protein S4... 860 5.4e-86 1
UNIPROTKB|Q76MY1 - symbol:RPS4X "40S ribosomal protein S4... 860 5.4e-86 1
UNIPROTKB|Q76N24 - symbol:RPS4X "40S ribosomal protein S4... 860 5.4e-86 1
MGI|MGI:98158 - symbol:Rps4x "ribosomal protein S4, X-lin... 860 5.4e-86 1
RGD|3600 - symbol:Rps4x "ribosomal protein S4, X-linked" ... 860 5.4e-86 1
UNIPROTKB|A2VE06 - symbol:RPS4Y1 "Ribosomal protein S4, Y... 855 1.8e-85 1
ZFIN|ZDB-GENE-040927-19 - symbol:rps4x "ribosomal protein... 854 2.4e-85 1
UNIPROTKB|P47836 - symbol:RPS4 "40S ribosomal protein S4"... 853 3.0e-85 1
UNIPROTKB|G3N0K3 - symbol:G3N0K3 "Uncharacterized protein... 849 8.0e-85 1
UNIPROTKB|O62738 - symbol:RPS4X "40S ribosomal protein S4... 843 3.4e-84 1
UNIPROTKB|F1MJH2 - symbol:F1MJH2 "Uncharacterized protein... 839 9.1e-84 1
POMBASE|SPBC21B10.10 - symbol:rps402 "40S ribosomal prote... 839 9.1e-84 1
POMBASE|SPAC959.07 - symbol:rps403 "40S ribosomal protein... 837 1.5e-83 1
POMBASE|SPBC19F8.08 - symbol:rps401 "40S ribosomal protei... 837 1.5e-83 1
SGD|S000003906 - symbol:RPS4A "Protein component of the s... 834 3.1e-83 1
SGD|S000001246 - symbol:RPS4B "Protein component of the s... 834 3.1e-83 1
CGD|CAL0004156 - symbol:orf19.3354 species:5476 "Candida ... 826 2.2e-82 1
RGD|1590988 - symbol:Rps4y2 "ribosomal protein S4, Y-link... 825 2.8e-82 1
UNIPROTKB|G3N267 - symbol:G3N267 "Uncharacterized protein... 819 1.2e-81 1
UNIPROTKB|C9JEH7 - symbol:RPS4Y1 "40S ribosomal protein S... 815 3.2e-81 1
UNIPROTKB|P22090 - symbol:RPS4Y1 "40S ribosomal protein S... 815 3.2e-81 1
FB|FBgn0011284 - symbol:RpS4 "Ribosomal protein S4" speci... 814 4.1e-81 1
UNIPROTKB|J9NVP3 - symbol:J9NVP3 "Uncharacterized protein... 814 4.1e-81 1
UNIPROTKB|E1BGR7 - symbol:E1BGR7 "Uncharacterized protein... 805 3.7e-80 1
UNIPROTKB|G5EHX7 - symbol:MGCH7_ch7g494 "40S ribosomal pr... 800 1.2e-79 1
ASPGD|ASPL0000073357 - symbol:AN4794 species:162425 "Emer... 798 2.0e-79 1
DICTYBASE|DDB_G0272825 - symbol:rps4 "40S ribosomal prote... 786 3.8e-78 1
UNIPROTKB|Q8TD47 - symbol:RPS4Y2 "40S ribosomal protein S... 785 4.8e-78 1
UNIPROTKB|F1NFC6 - symbol:RPS4X "Uncharacterized protein"... 762 1.3e-75 1
UNIPROTKB|F1P0F2 - symbol:RPS4X "Uncharacterized protein"... 757 4.5e-75 1
WB|WBGene00004473 - symbol:rps-4 species:6239 "Caenorhabd... 704 1.8e-69 1
GENEDB_PFALCIPARUM|PF11_0065 - symbol:PF11_0065 "ribosoma... 645 3.3e-63 1
UNIPROTKB|Q8IIU8 - symbol:PF11_0065 "40S ribosomal protei... 645 3.3e-63 1
UNIPROTKB|C9JQ55 - symbol:RPS4XP21 "Protein RPS4XP21" spe... 635 3.8e-62 1
UNIPROTKB|J9PAY7 - symbol:J9PAY7 "Uncharacterized protein... 607 3.5e-59 1
UNIPROTKB|J9NUE9 - symbol:J9NUE9 "Uncharacterized protein... 536 7.8e-56 2
UNIPROTKB|F1MZI5 - symbol:F1MZI5 "Uncharacterized protein... 567 6.1e-55 1
UNIPROTKB|D4AEI1 - symbol:D4AEI1 "Uncharacterized protein... 471 9.1e-45 1
UNIPROTKB|A6NH36 - symbol:RPS4X "40S ribosomal protein S4... 356 1.4e-32 1
UNIPROTKB|J9NZZ7 - symbol:J9NZZ7 "Uncharacterized protein... 341 5.4e-31 1
UNIPROTKB|F1SNP4 - symbol:RPS4XP21 "Uncharacterized prote... 280 1.6e-24 1
>TAIR|locus:2827612 [details] [associations]
symbol:AT2G17360 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] HAMAP:MF_00485 InterPro:IPR000876
InterPro:IPR002942 Pfam:PF01479 PIRSF:PIRSF002116 PROSITE:PS50889
SMART:SM00363 Pfam:PF00467 GO:GO:0005886 GO:GO:0005774
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0022627 InterPro:IPR005824
SMART:SM00739 EMBL:AF370469 EMBL:AY035131 EMBL:AY062983
EMBL:AY064625 EMBL:AY084230 IPI:IPI00533138 PIR:C84551
RefSeq:NP_565414.1 UniGene:At.25091 ProteinModelPortal:Q93VH9
SMR:Q93VH9 STRING:Q93VH9 PaxDb:Q93VH9 PRIDE:Q93VH9
EnsemblPlants:AT2G17360.1 GeneID:816243 KEGG:ath:AT2G17360
TAIR:At2g17360 eggNOG:COG1471 HOGENOM:HOG000231325
InParanoid:Q93VH9 KO:K02987 OMA:TYPVGFM PhylomeDB:Q93VH9
ProtClustDB:PLN00036 Genevestigator:Q93VH9 GermOnline:AT2G17360
InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 Uniprot:Q93VH9
Length = 261
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 204/224 (91%), Positives = 220/224 (98%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFM
Sbjct: 28 APKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY+NTYDGRTI
Sbjct: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGSFET
Sbjct: 148 RYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFET 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
IHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEE
Sbjct: 208 IHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEE 251
>TAIR|locus:2169339 [details] [associations]
symbol:AT5G07090 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=RCA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] HAMAP:MF_00485
InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006412
EMBL:AL163652 GO:GO:0003735 GO:GO:0022626 GO:GO:0019843
EMBL:AB010697 InterPro:IPR005824 SMART:SM00739 UniGene:At.25091
eggNOG:COG1471 HOGENOM:HOG000231325 KO:K02987 ProtClustDB:PLN00036
InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 EMBL:AY050933 EMBL:AY070769 EMBL:AY079417
EMBL:AY093715 EMBL:AY085205 EMBL:Z17994 EMBL:Z18498 EMBL:Z32619
EMBL:Z32618 EMBL:F20029 IPI:IPI00521495 PIR:T48480
RefSeq:NP_568179.1 UniGene:At.5040 ProteinModelPortal:P49204
SMR:P49204 IntAct:P49204 STRING:P49204 EnsemblPlants:AT5G07090.1
GeneID:830600 KEGG:ath:AT5G07090 TAIR:At5g07090 InParanoid:P49204
OMA:GHIQLNL PhylomeDB:P49204 Genevestigator:P49204 Uniprot:P49204
Length = 262
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 204/224 (91%), Positives = 220/224 (98%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFM
Sbjct: 28 APKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY+NTYDGRTI
Sbjct: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGSFET
Sbjct: 148 RYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFET 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
IHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEE
Sbjct: 208 IHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEE 251
>TAIR|locus:2171198 [details] [associations]
symbol:AT5G58420 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942
Pfam:PF01479 PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363
Pfam:PF00467 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730
GO:GO:0016020 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:AB025632 GO:GO:0022627 InterPro:IPR005824 SMART:SM00739
UniGene:At.25091 HOGENOM:HOG000231325 KO:K02987
ProtClustDB:PLN00036 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 EMBL:AF428285 EMBL:AY070467
EMBL:AY143834 EMBL:AY086206 IPI:IPI00545444 RefSeq:NP_200650.1
UniGene:At.9748 ProteinModelPortal:Q8VYK6 SMR:Q8VYK6 STRING:Q8VYK6
PRIDE:Q8VYK6 EnsemblPlants:AT5G58420.1 GeneID:835955
KEGG:ath:AT5G58420 TAIR:At5g58420 InParanoid:Q8VYK6 OMA:RVGIITH
PhylomeDB:Q8VYK6 Genevestigator:Q8VYK6 GermOnline:AT5G58420
Uniprot:Q8VYK6
Length = 262
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 203/224 (90%), Positives = 219/224 (97%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFM
Sbjct: 28 APKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY+NTYDGRTI
Sbjct: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTIKLDLE NKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGSFET
Sbjct: 148 RYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFET 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
IHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEE
Sbjct: 208 IHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEE 251
>UNIPROTKB|P79103 [details] [associations]
symbol:RPS4 "40S ribosomal protein S4" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
InterPro:IPR005824 eggNOG:COG1471 HOGENOM:HOG000231325 KO:K02987
InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 OMA:GHIQLNL GeneTree:ENSGT00390000005569
HOVERGEN:HBG000935 OrthoDB:EOG4QC161 CTD:6191 EMBL:BC102476
EMBL:BC141995 EMBL:D50107 IPI:IPI00815340 RefSeq:NP_001030522.1
UniGene:Bt.54084 UniGene:Bt.65280 ProteinModelPortal:P79103
SMR:P79103 STRING:P79103 PRIDE:P79103 Ensembl:ENSBTAT00000025024
GeneID:614241 KEGG:bta:614241 InParanoid:P79103 NextBio:20899011
Uniprot:P79103
Length = 263
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 156/224 (69%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|F2Z4Q1 [details] [associations]
symbol:RPS4X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0007275 GO:GO:0006412 GO:GO:0008284 GO:GO:0003723
GO:GO:0003735 GO:GO:0005844 GO:GO:0045727 GO:GO:0015935
InterPro:IPR005824 KO:K02987 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 OMA:GHIQLNL
GeneTree:ENSGT00390000005569 CTD:6191 EMBL:AAEX03026496
RefSeq:NP_001238971.1 UniGene:Cfa.29059 ProteinModelPortal:F2Z4Q1
SMR:F2Z4Q1 PRIDE:F2Z4Q1 Ensembl:ENSCAFT00000027164 GeneID:403893
KEGG:cfa:403893 NextBio:20817385 Uniprot:F2Z4Q1
Length = 263
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 156/224 (69%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|J9P5V0 [details] [associations]
symbol:J9P5V0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
InterPro:IPR005824 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 OMA:RVGIITH
GeneTree:ENSGT00390000005569 EMBL:AAEX03005634
Ensembl:ENSCAFT00000019873 Uniprot:J9P5V0
Length = 267
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 156/224 (69%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+P++GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPTTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NREKH GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|P62701 [details] [associations]
symbol:RPS4X "40S ribosomal protein S4, X isoform"
species:9606 "Homo sapiens" [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0005840 "ribosome" evidence=IDA] [GO:0006412
"translation" evidence=IC;IMP;TAS] [GO:0008284 "positive regulation
of cell proliferation" evidence=IMP] [GO:0045727 "positive
regulation of translation" evidence=IMP] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=NAS;IDA] [GO:0007275
"multicellular organismal development" evidence=IMP] [GO:0003735
"structural constituent of ribosome" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0005844 "polysome"
evidence=IDA] [GO:0015935 "small ribosomal subunit" evidence=IDA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0007275 Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413
GO:GO:0008284 GO:GO:0003735 GO:GO:0005844 GO:GO:0045727
GO:GO:0019843 GO:GO:0006415 GO:GO:0006414 GO:GO:0022627
Reactome:REACT_1762 GO:GO:0006614 InterPro:IPR005824 GO:GO:0019083
eggNOG:COG1471 KO:K02987 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 OMA:GHIQLNL HOVERGEN:HBG000935
OrthoDB:EOG4QC161 CTD:6191 EMBL:M58458 EMBL:AF041428 EMBL:CR456735
EMBL:BC000472 EMBL:BC071662 EMBL:BC100903 EMBL:BC100904 EMBL:Z70767
EMBL:M22146 IPI:IPI00217030 PIR:B36338 RefSeq:NP_000998.1
UniGene:Hs.118076 ProteinModelPortal:P62701 SMR:P62701
IntAct:P62701 MINT:MINT-1159032 STRING:P62701 PhosphoSite:P62701
DMDM:50403628 SWISS-2DPAGE:P62701 PaxDb:P62701 PeptideAtlas:P62701
PRIDE:P62701 DNASU:6191 Ensembl:ENST00000316084 GeneID:6191
KEGG:hsa:6191 UCSC:uc004ear.3 GeneCards:GC0XM071475 HGNC:HGNC:10424
HPA:HPA000857 MIM:312760 neXtProt:NX_P62701 PharmGKB:PA34839
InParanoid:P62701 PhylomeDB:P62701 ChiTaRS:RPS4X GenomeRNAi:6191
NextBio:24041 PMAP-CutDB:P62701 ArrayExpress:P62701 Bgee:P62701
CleanEx:HS_RPS4X Genevestigator:P62701 GermOnline:ENSG00000198034
Uniprot:P62701
Length = 263
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 156/224 (69%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|F1RQ91 [details] [associations]
symbol:RPS4X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0007275 GO:GO:0006412 GO:GO:0008284 GO:GO:0003723
GO:GO:0003735 GO:GO:0005844 GO:GO:0045727 GO:GO:0015935
InterPro:IPR005824 KO:K02987 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 OMA:GHIQLNL
GeneTree:ENSGT00390000005569 CTD:39484 EMBL:CU469343
RefSeq:NP_001191212.1 UniGene:Ssc.13017 ProteinModelPortal:F1RQ91
SMR:F1RQ91 PRIDE:F1RQ91 Ensembl:ENSSSCT00000013564 GeneID:397611
KEGG:ssc:397611 ArrayExpress:F1RQ91 Uniprot:F1RQ91
Length = 263
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 156/224 (69%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|P62704 [details] [associations]
symbol:RPS4X "40S ribosomal protein S4, X isoform"
species:10036 "Mesocricetus auratus" [GO:0005840 "ribosome"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
InterPro:IPR005824 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 HOVERGEN:HBG000935 EMBL:D11087
ProteinModelPortal:P62704 SMR:P62704 PRIDE:P62704 Uniprot:P62704
Length = 263
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 156/224 (69%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|P62705 [details] [associations]
symbol:RPS4X "40S ribosomal protein S4, X isoform"
species:9685 "Felis catus" [GO:0005840 "ribosome" evidence=ISS]
[GO:0030529 "ribonucleoprotein complex" evidence=ISS]
HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
InterPro:IPR005824 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 GeneTree:ENSGT00390000005569
HOVERGEN:HBG000935 EMBL:U22232 EMBL:D50106 PIR:PC4159
RefSeq:XP_004000676.1 ProteinModelPortal:P62705 SMR:P62705
IntAct:P62705 PRIDE:P62705 GeneID:768275 Uniprot:P62705
Length = 263
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 156/224 (69%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|Q76MY1 [details] [associations]
symbol:RPS4X "40S ribosomal protein S4, X isoform"
species:9543 "Macaca fuscata fuscata" [GO:0005840 "ribosome"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
InterPro:IPR005824 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 HOVERGEN:HBG000935 EMBL:AB024285
ProteinModelPortal:Q76MY1 SMR:Q76MY1 PRIDE:Q76MY1 Uniprot:Q76MY1
Length = 263
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 156/224 (69%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|Q76N24 [details] [associations]
symbol:RPS4X "40S ribosomal protein S4, X isoform"
species:9534 "Chlorocebus aethiops" [GO:0005840 "ribosome"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
InterPro:IPR005824 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 EMBL:AB015610
ProteinModelPortal:Q76N24 SMR:Q76N24 PRIDE:Q76N24
HOVERGEN:HBG000935 OrthoDB:EOG4QC161 Uniprot:Q76N24
Length = 263
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 156/224 (69%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>MGI|MGI:98158 [details] [associations]
symbol:Rps4x "ribosomal protein S4, X-linked" species:10090
"Mus musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=ISO] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=ISO] [GO:0005844 "polysome"
evidence=ISO] [GO:0006412 "translation" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=ISO] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO]
[GO:0015935 "small ribosomal subunit" evidence=ISA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942
Pfam:PF01479 PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363
MGI:MGI:98158 Pfam:PF00467 GO:GO:0007275 GO:GO:0006412
GO:GO:0008284 GO:GO:0003735 GO:GO:0005844 GO:GO:0045727
GO:GO:0019843 GO:GO:0015935 InterPro:IPR005824 eggNOG:COG1471
KO:K02987 InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 HOVERGEN:HBG000935 OrthoDB:EOG4QC161 CTD:6191
ChiTaRS:RPS4X EMBL:M73436 EMBL:AK014210 EMBL:BC009100 EMBL:M77296
IPI:IPI00331092 RefSeq:NP_033120.1 UniGene:Mm.66
ProteinModelPortal:P62702 SMR:P62702 IntAct:P62702 STRING:P62702
PhosphoSite:P62702 PaxDb:P62702 PRIDE:P62702 DNASU:20102
Ensembl:ENSMUST00000033683 GeneID:20102 KEGG:mmu:20102
InParanoid:P62702 NextBio:297599 Bgee:P62702 CleanEx:MM_RPS4X
Genevestigator:P62702 GermOnline:ENSMUSG00000031320 Uniprot:P62702
Length = 263
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 156/224 (69%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>RGD|3600 [details] [associations]
symbol:Rps4x "ribosomal protein S4, X-linked" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005840 "ribosome"
evidence=ISO;ISS] [GO:0005844 "polysome" evidence=IEA;ISO]
[GO:0006412 "translation" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA;ISO] [GO:0015935 "small ribosomal
subunit" evidence=IEA;ISO] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO;ISS] [GO:0045727
"positive regulation of translation" evidence=IEA;ISO] HAMAP:MF_00485
InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479 PIRSF:PIRSF002116
PROSITE:PS50889 SMART:SM00363 RGD:3600 Pfam:PF00467 GO:GO:0007275
GO:GO:0006412 GO:GO:0008284 GO:GO:0005840 GO:GO:0003735 GO:GO:0005844
GO:GO:0045727 GO:GO:0019843 GO:GO:0015935 InterPro:IPR005824
eggNOG:COG1471 HOGENOM:HOG000231325 KO:K02987 InterPro:IPR013845
InterPro:IPR013843 InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900
Pfam:PF08071 ProDom:PD002667 PROSITE:PS00528 OMA:GHIQLNL
GeneTree:ENSGT00390000005569 HOVERGEN:HBG000935 OrthoDB:EOG4QC161
CTD:6191 EMBL:X14210 EMBL:BC086560 IPI:IPI00475474 PIR:S14080
RefSeq:NP_001007601.1 RefSeq:XP_002730304.1 RefSeq:XP_003754823.1
UniGene:Rn.40171 ProteinModelPortal:P62703 SMR:P62703 IntAct:P62703
STRING:P62703 PRIDE:P62703 Ensembl:ENSRNOT00000004278
Ensembl:ENSRNOT00000051149 GeneID:100362640 GeneID:29426
KEGG:rno:100362640 KEGG:rno:29426 UCSC:RGD:3600 InParanoid:P62703
NextBio:609134 Genevestigator:P62703 GermOnline:ENSRNOG00000003201
GermOnline:ENSRNOG00000029574 Uniprot:P62703
Length = 263
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 156/224 (69%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|A2VE06 [details] [associations]
symbol:RPS4Y1 "Ribosomal protein S4, Y-linked 1"
species:9913 "Bos taurus" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
InterPro:IPR005824 eggNOG:COG1471 HOGENOM:HOG000231325 KO:K02987
OMA:TYPVGFM InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 GeneTree:ENSGT00390000005569
HOVERGEN:HBG000935 OrthoDB:EOG4QC161 CTD:6192 UniGene:Bt.54084
EMBL:DAAA02054984 EMBL:BC133507 IPI:IPI00841955
RefSeq:NP_001075891.1 STRING:A2VE06 Ensembl:ENSBTAT00000036142
GeneID:286873 KEGG:bta:286873 InParanoid:A2VE06 NextBio:20806522
Uniprot:A2VE06
Length = 263
Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
Identities = 155/224 (69%), Positives = 186/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI K ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKIGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>ZFIN|ZDB-GENE-040927-19 [details] [associations]
symbol:rps4x "ribosomal protein S4, X-linked"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IMP] [GO:0007420 "brain
development" evidence=IMP] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
ZFIN:ZDB-GENE-040927-19 GO:GO:0007420 GO:GO:0006412 GO:GO:0005840
GO:GO:0009790 GO:GO:0003735 GO:GO:0019843 InterPro:IPR005824
SMART:SM00739 eggNOG:COG1471 HOGENOM:HOG000231325 KO:K02987
InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 GeneTree:ENSGT00390000005569 HOVERGEN:HBG000935
OrthoDB:EOG4QC161 EMBL:BC081584 IPI:IPI00493144
RefSeq:NP_001005589.1 UniGene:Dr.26403 STRING:Q642H9 PRIDE:Q642H9
Ensembl:ENSDART00000128917 GeneID:449547 KEGG:dre:449547 CTD:6191
InParanoid:Q642H9 NextBio:20832665 Bgee:Q642H9 Uniprot:Q642H9
Length = 263
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 153/224 (68%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYP GFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPTGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DVVSI KT ENFRL+YD KGRF +H + +EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVVSIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCKVRKILIGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DL+ KITDFIKF+ GN+ MVTGG N GR+G+I NREKH GSF+
Sbjct: 148 RYPDPLIKVNDTIRIDLDTGKITDFIKFETGNMCMVTGGANLGRIGVITNREKHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++D++G+ FATRL N+F IGKG+KPWVSLP+GKG++L+I EE
Sbjct: 208 VHVKDSIGNSFATRLSNIFVIGKGNKPWVSLPRGKGVRLTIAEE 251
>UNIPROTKB|P47836 [details] [associations]
symbol:RPS4 "40S ribosomal protein S4" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
InterPro:IPR005824 eggNOG:COG1471 HOGENOM:HOG000231325 KO:K02987
InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 HOVERGEN:HBG000935 CTD:6191 EMBL:L24368
IPI:IPI00581295 PIR:A56537 RefSeq:NP_990439.1 UniGene:Gga.4045
STRING:P47836 PRIDE:P47836 GeneID:396001 KEGG:gga:396001
NextBio:20816064 ArrayExpress:P47836 Uniprot:P47836
Length = 263
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 155/224 (69%), Positives = 187/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|G3N0K3 [details] [associations]
symbol:G3N0K3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000876 InterPro:IPR002942 PIRSF:PIRSF002116
SMART:SM00363 Pfam:PF00467 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 InterPro:IPR005824 InterPro:IPR013845
InterPro:IPR013843 InterPro:IPR018199 PANTHER:PTHR11581
Pfam:PF00900 Pfam:PF08071 ProDom:PD002667 PROSITE:PS00528
OMA:RVGIITH GeneTree:ENSGT00390000005569 EMBL:DAAA02025944
Ensembl:ENSBTAT00000063866 NextBio:20926556 Uniprot:G3N0K3
Length = 262
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 155/224 (69%), Positives = 186/224 (83%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV-KICMQRFIKIDGKVRTDITYPAGFM 86
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENF L+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 87 DVISIDKTGENFHLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 146
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 147 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 206
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 207 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250
>UNIPROTKB|O62738 [details] [associations]
symbol:RPS4X "40S ribosomal protein S4, X isoform"
species:13616 "Monodelphis domestica" [GO:0005840 "ribosome"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
InterPro:IPR005824 eggNOG:COG1471 HOGENOM:HOG000231325 KO:K02987
InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 GeneTree:ENSGT00390000005569 HOVERGEN:HBG000935
CTD:6191 EMBL:AF051136 RefSeq:NP_001028159.1 UniGene:Mdm.181
STRING:O62738 PRIDE:O62738 Ensembl:ENSMODT00000014114 GeneID:554195
KEGG:mdo:554195 InParanoid:O62738 OrthoDB:EOG40CHHM Uniprot:O62738
Length = 263
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 154/224 (68%), Positives = 184/224 (82%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYP GFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDTTYPVGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR G K IP++ T+D RTI
Sbjct: 88 DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTFVGTKAIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NREKH GSF+
Sbjct: 148 RYPDPLIKMNDTIQIDLETGKITDFIKFDTGNMCMVTGGANLGRIGVITNREKHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|F1MJH2 [details] [associations]
symbol:F1MJH2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0007275 GO:GO:0006412 GO:GO:0008284 GO:GO:0003723
GO:GO:0003735 GO:GO:0005844 GO:GO:0045727 GO:GO:0015935
InterPro:IPR005824 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 GeneTree:ENSGT00390000005569
EMBL:DAAA02019700 IPI:IPI00904298 PRIDE:F1MJH2
Ensembl:ENSBTAT00000044192 OMA:IKANDTH NextBio:20929581
Uniprot:F1MJH2
Length = 263
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 152/224 (67%), Positives = 183/224 (81%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+ KT ENFRL+YDT GRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVIRTDKTGENFRLIYDTTGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F GKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVTGKGNKPWISLPRGKGIRLTIAEE 251
>POMBASE|SPBC21B10.10 [details] [associations]
symbol:rps402 "40S ribosomal protein S4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO] HAMAP:MF_00485
InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363
PomBase:SPBC21B10.10 Pfam:PF00467 GO:GO:0005730 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
GO:GO:0022627 InterPro:IPR005824 eggNOG:COG1471
HOGENOM:HOG000231325 KO:K02987 InterPro:IPR013845
InterPro:IPR013843 InterPro:IPR018199 PANTHER:PTHR11581
Pfam:PF00900 Pfam:PF08071 ProDom:PD002667 PROSITE:PS00528
OMA:RVGIITH OrthoDB:EOG4PCF23 PIR:T39917 RefSeq:NP_595677.1
STRING:Q9USW5 PRIDE:Q9USW5 EnsemblFungi:SPBC21B10.10.1
GeneID:2540325 KEGG:spo:SPBC21B10.10 NextBio:20801454
Uniprot:Q9USW5
Length = 262
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 159/224 (70%), Positives = 182/224 (81%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VDGKVRTD T+P GFM
Sbjct: 28 APKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIQVDGKVRTDSTFPTGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+S+ KT E+FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KG+P++ T+DGRTI
Sbjct: 88 DVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTIKL+LE NKI FIKFD VMVTGGRN GRVG I +RE H GSFE
Sbjct: 148 RYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEI 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
IH++DAL EFATRL NVF IG+ K W+SLPKGKG+KLSI EE
Sbjct: 208 IHVKDALDREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEE 251
>POMBASE|SPAC959.07 [details] [associations]
symbol:rps403 "40S ribosomal protein S4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942
Pfam:PF01479 PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363
PomBase:SPAC959.07 Pfam:PF00467 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
GO:GO:0022627 InterPro:IPR005824 HOGENOM:HOG000231325 KO:K02987
InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 OMA:GHIQLNL OrthoDB:EOG4PCF23 EMBL:AB018354
PIR:T43429 RefSeq:NP_594174.1 STRING:Q9P4W9
EnsemblFungi:SPAC959.07.1 GeneID:2543486 KEGG:spo:SPAC959.07
NextBio:20804498 Uniprot:Q9P4W9
Length = 262
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 159/224 (70%), Positives = 182/224 (81%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VDGKVRTD T+P GFM
Sbjct: 28 APKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRTDSTFPTGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+S+ KT E+FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KG+P++ T+DGRTI
Sbjct: 88 DVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTIKL+LE NKI FIKFD VMVTGGRN GRVG I +RE H GSFE
Sbjct: 148 RYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEI 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
IH++DAL EFATRL NVF IG+ K W+SLPKGKG+KLSI EE
Sbjct: 208 IHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEE 251
>POMBASE|SPBC19F8.08 [details] [associations]
symbol:rps401 "40S ribosomal protein S4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942
Pfam:PF01479 PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363
PomBase:SPBC19F8.08 Pfam:PF00467 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
GO:GO:0022627 InterPro:IPR005824 HOGENOM:HOG000231325 KO:K02987
InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 EMBL:U97374 PIR:T39831 PIR:T40012
RefSeq:NP_596350.1 STRING:P87158 PRIDE:P87158
EnsemblFungi:SPBC19F8.08.1 GeneID:2540649 KEGG:spo:SPBC19F8.08
OMA:DKRLATK OrthoDB:EOG4PCF23 NextBio:20801773 Uniprot:P87158
Length = 262
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 159/224 (70%), Positives = 182/224 (81%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VDGKVRTD T+P GFM
Sbjct: 28 APKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRTDSTFPTGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+S+ KT E+FRL+YD KGRF +H + EEAK+KLCKV+ VQ G KG+P++ T+DGRTI
Sbjct: 88 DVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTIKL+LE NKI FIKFD VMVTGGRN GRVG I +RE H GSFE
Sbjct: 148 RYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEI 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
IH++DAL EFATRL NVF IG+ K W+SLPKGKG+KLSI EE
Sbjct: 208 IHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEE 251
>SGD|S000003906 [details] [associations]
symbol:RPS4A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;IDA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=IC] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942
Pfam:PF01479 PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363
SGD:S000003906 Pfam:PF00467 EMBL:BK006943 RefSeq:NP_012683.4
GeneID:853614 KEGG:sce:YJR149W KO:K00459 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 GO:GO:0030686 GO:GO:0022627 PDB:3IZB
PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3U5C PDBsum:3U5G
InterPro:IPR005824 SMART:SM00739 HOGENOM:HOG000231325 KO:K02987
InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 EMBL:M64293 EMBL:Z49645 PIR:S20054
RefSeq:NP_012073.1 RefSeq:NP_012679.3 ProteinModelPortal:P0CX35
SMR:P0CX35 EnsemblFungi:YHR203C EnsemblFungi:YJR145C GeneID:853610
GeneID:856610 KEGG:sce:YHR203C KEGG:sce:YJR145C CYGD:YJR145c
NextBio:974454 ArrayExpress:P0CX35 GermOnline:YJR145C
Uniprot:P0CX35
Length = 261
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 154/226 (68%), Positives = 184/226 (81%)
Query: 18 CQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 77
C AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRTD TYPAG
Sbjct: 26 CYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPAG 85
Query: 78 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 137
FMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DGR
Sbjct: 86 FMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDGR 145
Query: 138 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 197
TIRYPDP IK NDT+K+DL KITDFIKFD G +V VTGGRN GR+G I ++E+H G F
Sbjct: 146 TIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGF 205
Query: 198 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE
Sbjct: 206 DLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEE 251
>SGD|S000001246 [details] [associations]
symbol:RPS4B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=IC] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942
Pfam:PF01479 PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363
SGD:S000001246 Pfam:PF00467 RefSeq:NP_012683.4 GeneID:853614
KEGG:sce:YJR149W KO:K00459 EMBL:BK006934 GO:GO:0003735 EMBL:U00030
GO:GO:0002181 GO:GO:0019843 GO:GO:0030686 GO:GO:0022627
InterPro:IPR005824 SMART:SM00739 KO:K02987 InterPro:IPR013845
InterPro:IPR013843 InterPro:IPR018199 PANTHER:PTHR11581
Pfam:PF00900 Pfam:PF08071 ProDom:PD002667 PROSITE:PS00528
PIR:S20054 RefSeq:NP_012073.1 RefSeq:NP_012679.3
EnsemblFungi:YHR203C EnsemblFungi:YJR145C GeneID:853610
GeneID:856610 KEGG:sce:YHR203C KEGG:sce:YJR145C NextBio:974454
EMBL:M64294 ProteinModelPortal:P0CX36 SMR:P0CX36 CYGD:YHR203c
GeneTree:ENSGT00390000005569 ArrayExpress:P0CX36 GermOnline:YHR203C
Uniprot:P0CX36
Length = 261
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 154/226 (68%), Positives = 184/226 (81%)
Query: 18 CQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 77
C AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VDGKVRTD TYPAG
Sbjct: 26 CYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPAG 85
Query: 78 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 137
FMDV+++ TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DGR
Sbjct: 86 FMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDGR 145
Query: 138 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 197
TIRYPDP IK NDT+K+DL KITDFIKFD G +V VTGGRN GR+G I ++E+H G F
Sbjct: 146 TIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGF 205
Query: 198 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE
Sbjct: 206 DLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEE 251
>CGD|CAL0004156 [details] [associations]
symbol:orf19.3354 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000059 EMBL:AACQ01000058 InterPro:IPR005824
SMART:SM00739 eggNOG:COG1471 HOGENOM:HOG000231325 KO:K02987
InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 RefSeq:XP_717065.1 RefSeq:XP_717144.1 STRING:Q5A5Q8
GeneID:3641247 GeneID:3641283 KEGG:cal:CaO19.12801
KEGG:cal:CaO19.5341 CGD:CAL0004310 Uniprot:Q5A5Q8
Length = 262
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 154/225 (68%), Positives = 186/225 (82%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RE LPL++ LRNRLKYAL REV AI+MQ+HV VDGKVRTD TYPAGFM
Sbjct: 28 APRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRTDTTYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+++ TNE+FRL+YD KG+F +H + EEA +KL KV+ VQ G+KG+PY+ T+DGRTI
Sbjct: 88 DVITLEATNEHFRLVYDVKGKFAVHRISAEEAAYKLGKVKKVQLGKKGVPYVVTHDGRTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLI+ANDT+K+DL KI DFIKFD G +VMVTGGRN GRVG+I +REKH+G F+
Sbjct: 148 RYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHREKHEGGFDL 207
Query: 200 IHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEE 243
+HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE
Sbjct: 208 VHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEE 252
>RGD|1590988 [details] [associations]
symbol:Rps4y2 "ribosomal protein S4, Y-linked 2" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 RGD:1590988
Pfam:PF00467 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:CH473964 InterPro:IPR005824 InterPro:IPR013845
InterPro:IPR013843 InterPro:IPR018199 PANTHER:PTHR11581
Pfam:PF00900 Pfam:PF08071 ProDom:PD002667 PROSITE:PS00528
GeneTree:ENSGT00390000005569 OrthoDB:EOG40CHHM CTD:140032
IPI:IPI00562127 RefSeq:NP_001103082.1 UniGene:Rn.107176
Ensembl:ENSRNOT00000043543 GeneID:690845 KEGG:rno:690845
UCSC:RGD:1590988 OMA:RLRECLP NextBio:741805 Uniprot:D3ZX01
Length = 262
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 151/224 (67%), Positives = 183/224 (81%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPH+ RECLPL + LRNRLKYALT EV I MQR + VDGKVRTD YPAGFM
Sbjct: 28 APRPSAGPHRLRECLPLAIFLRNRLKYALTGDEVKKICMQRLIKVDGKVRTDVAYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI K+ ENFRL+YDTKGRF +H + EEAK+KLCKVR V G KGIP++ T+D RTI
Sbjct: 88 DVISIDKSGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKVFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDT+++ L+ KITD IKFD GN+ MVTGG N GR+GII NRE+H GSF+
Sbjct: 148 RYPDPLIKVNDTVQISLDSGKITDAIKFDTGNLCMVTGGANLGRIGIITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|G3N267 [details] [associations]
symbol:G3N267 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000876 InterPro:IPR002942 PIRSF:PIRSF002116
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 InterPro:IPR013845 InterPro:IPR013843
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
GeneTree:ENSGT00390000005569 EMBL:DAAA02023298
Ensembl:ENSBTAT00000063361 NextBio:20926865 Uniprot:G3N267
Length = 263
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 150/224 (66%), Positives = 180/224 (80%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPL + LRNRLKYALT EV I MQR +DGKV TD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLFIFLRNRLKYALTGDEVKKICMQRFTKIDGKVCTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENF L+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFHLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK N TI++DLE KITDFIKFD GN+ MVTGG + GR+G+I NRE+H GSF+
Sbjct: 148 RYPDPLIKVNGTIQIDLETGKITDFIKFDTGNLCMVTGGASLGRIGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F GKG+KPW+SLP+GKGI L+I EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVFGKGNKPWISLPRGKGICLTIAEE 251
>UNIPROTKB|C9JEH7 [details] [associations]
symbol:RPS4Y1 "40S ribosomal protein S4, Y isoform 1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
InterPro:IPR005824 HOGENOM:HOG000231325 InterPro:IPR013845
InterPro:IPR013843 InterPro:IPR018199 PANTHER:PTHR11581
Pfam:PF00900 Pfam:PF08071 ProDom:PD002667 PROSITE:PS00528
HGNC:HGNC:10425 ChiTaRS:RPS4Y1 EMBL:AC006040 IPI:IPI00643830
ProteinModelPortal:C9JEH7 SMR:C9JEH7 STRING:C9JEH7
Ensembl:ENST00000430575 ArrayExpress:C9JEH7 Bgee:C9JEH7
Uniprot:C9JEH7
Length = 262
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 147/224 (65%), Positives = 182/224 (81%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR D TYPAGFM
Sbjct: 37 APRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFM 96
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 97 DVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTI 156
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NRE+H GSF+
Sbjct: 157 RYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDV 216
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ EE
Sbjct: 217 VHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEE 260
>UNIPROTKB|P22090 [details] [associations]
symbol:RPS4Y1 "40S ribosomal protein S4, Y isoform 1"
species:9606 "Homo sapiens" [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IMP] [GO:0005844 "polysome" evidence=IDA] [GO:0006412
"translation" evidence=IMP;TAS] [GO:0007275 "multicellular
organismal development" evidence=IMP] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=NAS] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
[GO:0006415 "translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0007275 Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413
GO:GO:0003723 GO:GO:0003735 GO:GO:0005844 GO:GO:0019843
EMBL:CH471115 GO:GO:0006415 GO:GO:0006414 GO:GO:0022627
Reactome:REACT_1762 GO:GO:0006614 InterPro:IPR005824 GO:GO:0019083
eggNOG:COG1471 HOGENOM:HOG000231325 KO:K02987 InterPro:IPR013845
InterPro:IPR013843 InterPro:IPR018199 PANTHER:PTHR11581
Pfam:PF00900 Pfam:PF08071 ProDom:PD002667 PROSITE:PS00528
OMA:DKRLATK HOVERGEN:HBG000935 HPA:HPA000857 EMBL:M58459
EMBL:AF041427 EMBL:AF116711 EMBL:AK292819 EMBL:BC010286
IPI:IPI00302740 PIR:A36338 RefSeq:NP_000999.1 UniGene:Hs.282376
ProteinModelPortal:P22090 SMR:P22090 IntAct:P22090 STRING:P22090
PhosphoSite:P22090 DMDM:133948 PaxDb:P22090 PRIDE:P22090 DNASU:6192
Ensembl:ENST00000250784 GeneID:6192 KEGG:hsa:6192 UCSC:uc004fqi.3
CTD:6192 GeneCards:GC0YP002709 HGNC:HGNC:10425 MIM:470000
neXtProt:NX_P22090 PharmGKB:PA34840 InParanoid:P22090
OrthoDB:EOG42BXBF PhylomeDB:P22090 ChiTaRS:RPS4Y1 GenomeRNAi:6192
NextBio:24045 ArrayExpress:P22090 Bgee:P22090 CleanEx:HS_RPS4Y1
Genevestigator:P22090 GermOnline:ENSG00000129824 Uniprot:P22090
Length = 263
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 147/224 (65%), Positives = 182/224 (81%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVR D TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NRE+H GSF+
Sbjct: 148 RYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ EE
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEE 251
>FB|FBgn0011284 [details] [associations]
symbol:RpS4 "Ribosomal protein S4" species:7227 "Drosophila
melanogaster" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0005840 "ribosome" evidence=IDA;NAS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] [GO:0051297
"centrosome organization" evidence=IMP] [GO:0051298 "centrosome
duplication" evidence=IMP] HAMAP:MF_00485 InterPro:IPR000876
InterPro:IPR002942 Pfam:PF01479 PIRSF:PIRSF002116 PROSITE:PS50889
SMART:SM00363 Pfam:PF00467 EMBL:AE014296 GO:GO:0051298
GO:GO:0005811 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 GO:GO:0000022 InterPro:IPR005824 eggNOG:COG1471
KO:K02987 InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 OMA:GHIQLNL GeneTree:ENSGT00390000005569
EMBL:D16257 EMBL:BT011369 PIR:JN0871 RefSeq:NP_524053.2
RefSeq:NP_729871.1 UniGene:Dm.951 ProteinModelPortal:P41042
SMR:P41042 IntAct:P41042 MINT:MINT-1017566 STRING:P41042
PaxDb:P41042 PRIDE:P41042 EnsemblMetazoa:FBtr0075884
EnsemblMetazoa:FBtr0075885 GeneID:39484 KEGG:dme:Dmel_CG11276
CTD:39484 FlyBase:FBgn0011284 InParanoid:P41042 OrthoDB:EOG49CNQH
PhylomeDB:P41042 GenomeRNAi:39484 NextBio:813879 Bgee:P41042
GermOnline:CG11276 Uniprot:P41042
Length = 261
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 148/224 (66%), Positives = 184/224 (82%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR V VDGKVRTD TYPAG+M
Sbjct: 28 APRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+++ KT E FRL+YD KGRF +H + EEAK+KLCKV+ Q G KG+P++ T+DGRTI
Sbjct: 88 DVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLI AND++++D+ KITD+IKFD GN+ M+TGGRN GRVG + NRE+H GSF+
Sbjct: 148 RYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDI 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE
Sbjct: 208 VHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEE 251
>UNIPROTKB|J9NVP3 [details] [associations]
symbol:J9NVP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000876 InterPro:IPR002942
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
InterPro:IPR005824 InterPro:IPR013845 InterPro:IPR013843
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
GeneTree:ENSGT00390000005569 EMBL:AAEX03003502
Ensembl:ENSCAFT00000022584 Uniprot:J9NVP3
Length = 263
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 149/224 (66%), Positives = 180/224 (80%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+G HK RECLPLI+ LR RLKYALT EV I MQR + +DGKVRT TYPAGFM
Sbjct: 28 APRPSTGSHKLRECLPLIIFLRKRLKYALTGDEVTKICMQRFIKIDGKVRTVITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RT+
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTV 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPL+K NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H G F+
Sbjct: 148 RYPDPLVKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGFFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FAT+L N+F IGKG KPW+SLP GKGI L+I EE
Sbjct: 208 VHVKDANGNSFATQLSNIFVIGKGIKPWISLPCGKGICLTIAEE 251
>UNIPROTKB|E1BGR7 [details] [associations]
symbol:E1BGR7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000876 InterPro:IPR002942 PIRSF:PIRSF002116
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 GeneTree:ENSGT00390000005569
EMBL:DAAA02029827 IPI:IPI00907152 Ensembl:ENSBTAT00000054915
NextBio:20899075 Uniprot:E1BGR7
Length = 263
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 148/224 (66%), Positives = 182/224 (81%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
A +PS+GPHK RECLPLI+ LRNRLK ALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 ALRPSAGPHKLRECLPLIIFLRNRLKCALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRL+YDTKG F +H + EEAK+KL KVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIDKTGENFRLIYDTKGHFAVHRITPEEAKYKLYKVRKIFMGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDF+KFD GN+ MVTGG + GR+G+I +RE+H GSF+
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFMKFDTGNLCMVTGGASLGRIGVITSRERHPGSFDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATRL ++F IGKG+KPW+SLP GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRLSDIFVIGKGNKPWISLPHGKGIRLTIAEE 251
>UNIPROTKB|G5EHX7 [details] [associations]
symbol:MGCH7_ch7g494 "40S ribosomal protein S4-A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000876 InterPro:IPR002942
Pfam:PF01479 PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
GO:GO:0043581 EMBL:CM000230 EMBL:CM001237 KO:K02987
InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 RefSeq:XP_003721009.1 EnsemblFungi:MGG_02747T0
GeneID:2682729 KEGG:mgr:MGG_02747 Uniprot:G5EHX7
Length = 262
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 150/224 (66%), Positives = 179/224 (79%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
APKPS GPHK RECLPLI+ +RNRLKYAL RE AILMQR V VDGKVRTD TYPAGFM
Sbjct: 28 APKPSPGPHKQRECLPLIVFIRNRLKYALNGRETKAILMQRLVKVDGKVRTDSTYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DVVSI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D RTI
Sbjct: 88 DVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDT+K++L+ KITDFIKFD G + MVT G N GRVG+I +RE+H G F
Sbjct: 148 RYPDPLIKVNDTVKINLDTGKITDFIKFDTGALAMVTAGNNMGRVGVITHRERHDGGFNI 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA+ + F TR NVF IG KPW+SLPKGKG+KL+I EE
Sbjct: 208 VHLKDAIDNTFTTRESNVFVIGT-EKPWISLPKGKGVKLTIAEE 250
>ASPGD|ASPL0000073357 [details] [associations]
symbol:AN4794 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
EMBL:BN001303 InterPro:IPR005824 HOGENOM:HOG000231325
InterPro:IPR013845 InterPro:IPR013843 InterPro:IPR018199
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
PROSITE:PS00528 OMA:GHIQLNL EnsemblFungi:CADANIAT00005628
Uniprot:C8VAM4
Length = 261
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 145/224 (64%), Positives = 180/224 (80%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
APK S GPHK R+CLPLI+ +RNRLKYAL RE AI+MQR + VDGKVRTD TYPAGFM
Sbjct: 28 APKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIQVDGKVRTDPTYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV++I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D RTI
Sbjct: 88 DVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKKVQLGKGGIPFLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDP IK NDT+K+D+ KITDF +FD G + MVTGGRN GRVG++ +RE+H G F
Sbjct: 148 RYPDPAIKVNDTVKVDIATGKITDFCRFDTGVVCMVTGGRNMGRVGVVTHRERHDGGFNI 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE
Sbjct: 208 VHVKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEE 250
>DICTYBASE|DDB_G0272825 [details] [associations]
symbol:rps4 "40S ribosomal protein S4" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0000822 "inositol hexakisphosphate binding"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_00485
InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363
dictyBase:DDB_G0272825 GO:GO:0005615 GO:GO:0006412
GenomeReviews:CM000151_GR GO:GO:0005840 GO:GO:0003735
EMBL:AAFI02000008 GO:GO:0000822 GO:GO:0019843 eggNOG:COG1471
KO:K02987 OMA:TYPVGFM InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 EMBL:AF039748 EMBL:U15424
RefSeq:XP_644913.1 STRING:P51405 PRIDE:P51405
EnsemblProtists:DDB0185063 GeneID:8618592 KEGG:ddi:DDB_G0272825
ProtClustDB:CLSZ2729231 Uniprot:P51405
Length = 267
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 148/224 (66%), Positives = 176/224 (78%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PSSGPHK RECLPLILVLRNRLKYALT +EV ILMQR V VDGKVRTD YPAGFM
Sbjct: 28 APRPSSGPHKLRECLPLILVLRNRLKYALTKKEVTLILMQRLVKVDGKVRTDPNYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENFRLL+D KGRF L + EEAKFKL +V V+ G +GIPY++T DGRTI
Sbjct: 88 DVISIEKTKENFRLLFDPKGRFTLQRITPEEAKFKLARVTRVETGNQGIPYVHTDDGRTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDP I +DTIK+D+E KIT FI F+V N+ M+ GG N GRVG + +REKH GSF+
Sbjct: 148 RYPDPAISIHDTIKIDIESGKITAFIPFEVNNLCMIVGGHNLGRVGAVTHREKHPGSFDI 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H+ D GH+FATRL NVF IGK S+ +VSLP GKG++ S ++E
Sbjct: 208 VHVTDTAGHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDE 251
>UNIPROTKB|Q8TD47 [details] [associations]
symbol:RPS4Y2 "40S ribosomal protein S4, Y isoform 2"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
InterPro:IPR005824 SMART:SM00739 eggNOG:COG1471
HOGENOM:HOG000231325 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 HOVERGEN:HBG000935 HPA:HPA000857
EMBL:AC009494 EMBL:AF497481 IPI:IPI00219894 RefSeq:NP_001034656.1
UniGene:Hs.367761 ProteinModelPortal:Q8TD47 SMR:Q8TD47
STRING:Q8TD47 PhosphoSite:Q8TD47 DMDM:27805713 PaxDb:Q8TD47
PRIDE:Q8TD47 Ensembl:ENST00000288666 GeneID:140032 KEGG:hsa:140032
UCSC:uc011nbb.2 CTD:140032 GeneCards:GC0YP022917 HGNC:HGNC:18501
MIM:400030 neXtProt:NX_Q8TD47 PharmGKB:PA38563 InParanoid:Q8TD47
OMA:TRISNIF OrthoDB:EOG4FFD3Q GenomeRNAi:140032 NextBio:84063
Bgee:Q8TD47 Genevestigator:Q8TD47 Uniprot:Q8TD47
Length = 263
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 143/224 (63%), Positives = 178/224 (79%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQ + +DGKVR D TYPAGF+
Sbjct: 28 APRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRVDITYPAGFI 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT E+FRL+Y+TKG F +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 88 DVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDARTI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDT+++DL KIT FIKFD GN+ MV G N GRVG+I NRE+H GS +
Sbjct: 148 RYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGSCDV 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE
Sbjct: 208 VHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEE 251
>UNIPROTKB|F1NFC6 [details] [associations]
symbol:RPS4X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
InterPro:IPR005824 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 GeneTree:ENSGT00390000005569
IPI:IPI00581295 EMBL:AADN02013195 Ensembl:ENSGALT00000007717
ArrayExpress:F1NFC6 Uniprot:F1NFC6
Length = 229
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 140/203 (68%), Positives = 167/203 (82%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 27 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 86
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 87 DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 146
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 147 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 206
Query: 200 IHIQDALGHEFATRLGNVFTIGK 222
+H++DA G+ FATRL N+F IGK
Sbjct: 207 VHVKDANGNSFATRLSNIFVIGK 229
>UNIPROTKB|F1P0F2 [details] [associations]
symbol:RPS4X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 Pfam:PF00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
InterPro:IPR005824 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 OMA:RVGIITH
GeneTree:ENSGT00390000005569 EMBL:AADN02013195 IPI:IPI00823196
Ensembl:ENSGALT00000040453 ArrayExpress:F1P0F2 Uniprot:F1P0F2
Length = 233
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 139/202 (68%), Positives = 166/202 (82%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 32 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 91
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT E+FRL+YDTKGRF +H + EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 92 DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 151
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDPLIK NDTI++DLE KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 152 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 211
Query: 200 IHIQDALGHEFATRLGNVFTIG 221
+H++DA G+ FATRL N+F IG
Sbjct: 212 VHVKDANGNSFATRLSNIFVIG 233
>WB|WBGene00004473 [details] [associations]
symbol:rps-4 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
HAMAP:MF_00485 InterPro:IPR000876 InterPro:IPR002942
PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363 GO:GO:0009792
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
eggNOG:COG1471 HOGENOM:HOG000231325 KO:K02987 InterPro:IPR013845
InterPro:IPR013843 InterPro:IPR018199 PANTHER:PTHR11581
Pfam:PF00900 Pfam:PF08071 ProDom:PD002667 PROSITE:PS00528
OMA:GHIQLNL GeneTree:ENSGT00390000005569 EMBL:FO081794
RefSeq:NP_501103.1 ProteinModelPortal:Q9N3X2 SMR:Q9N3X2
DIP:DIP-24988N IntAct:Q9N3X2 MINT:MINT-1080839 STRING:Q9N3X2
PaxDb:Q9N3X2 EnsemblMetazoa:Y43B11AR.4.1
EnsemblMetazoa:Y43B11AR.4.2 GeneID:177481 KEGG:cel:CELE_Y43B11AR.4
UCSC:Y43B11AR.4.1 CTD:177481 WormBase:Y43B11AR.4 InParanoid:Q9N3X2
NextBio:897016 Uniprot:Q9N3X2
Length = 259
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 138/224 (61%), Positives = 167/224 (74%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
A +P+ GPHK RE LPL L LRNRLKYAL Y E IL QR V VDGKVRT +P GFM
Sbjct: 27 AVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRVVRVDGKVRTCHKFPTGFM 86
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DVV+I +TNE FR+LYDTKGR+ +H ++ EA FKLCKV+SV+ KG+P + T DGRTI
Sbjct: 87 DVVAIERTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVNKGVPVLTTTDGRTI 146
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
RYPDP +K NDTI ++ KITD +KF+ GN+ VTGGRN GRVGII +RE+ G+ +
Sbjct: 147 RYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGASDI 206
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
IHI+D+ GH FATR+ NVF IGKG+K VSLP G GI+LSI EE
Sbjct: 207 IHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEE 250
>GENEDB_PFALCIPARUM|PF11_0065 [details] [associations]
symbol:PF11_0065 "ribosomal protein S4,
putative" species:5833 "Plasmodium falciparum" [GO:0015935 "small
ribosomal subunit" evidence=ISS] InterPro:IPR000876
InterPro:IPR002942 PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363
Pfam:PF00467 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
EMBL:AE014186 GO:GO:0015935 InterPro:IPR005824 SMART:SM00739
HOGENOM:HOG000231325 KO:K02987 InterPro:IPR013845
InterPro:IPR013843 InterPro:IPR018199 PANTHER:PTHR11581
Pfam:PF00900 Pfam:PF08071 ProDom:PD002667 PROSITE:PS00528
RefSeq:XP_001347741.2 ProteinModelPortal:Q8IIU8 IntAct:Q8IIU8
MINT:MINT-1589838 PRIDE:Q8IIU8 EnsemblProtists:PF11_0065:mRNA
GeneID:810617 KEGG:pfa:PF11_0065 EuPathDB:PlasmoDB:PF3D7_1105400
ProtClustDB:PTZ00118 Uniprot:Q8IIU8
Length = 261
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 123/224 (54%), Positives = 166/224 (74%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
APK SSGPHK E +PL+++LRNRLKYALT+ EV IL+Q+ V VD KVRTD T+P G M
Sbjct: 28 APKTSSGPHKLLESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKVRTDCTFPVGLM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+ I K+NE FRLLYD KGRF H + +EE+K+KLCKV+ + + + T+DGR+I
Sbjct: 88 DVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCKVKKILLRKGRLSIAVTHDGRSI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
Y P +K NDT++LDLE K+ + +KF VG++VMVT G + GRVG+I + +K+ G+++
Sbjct: 148 PYIHPDVKVNDTVRLDLETGKVLEHLKFQVGSLVMVTAGHSVGRVGVISSIDKNMGTYDI 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
IH++D+ FATRL NVF IG +KP++SLP+ KGIKL IIEE
Sbjct: 208 IHVKDSRNKVFATRLSNVFVIGDNTKPYISLPREKGIKLDIIEE 251
>UNIPROTKB|Q8IIU8 [details] [associations]
symbol:PF11_0065 "40S ribosomal protein S4, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0015935 "small
ribosomal subunit" evidence=ISS] InterPro:IPR000876
InterPro:IPR002942 PIRSF:PIRSF002116 PROSITE:PS50889 SMART:SM00363
Pfam:PF00467 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
EMBL:AE014186 GO:GO:0015935 InterPro:IPR005824 SMART:SM00739
HOGENOM:HOG000231325 KO:K02987 InterPro:IPR013845
InterPro:IPR013843 InterPro:IPR018199 PANTHER:PTHR11581
Pfam:PF00900 Pfam:PF08071 ProDom:PD002667 PROSITE:PS00528
RefSeq:XP_001347741.2 ProteinModelPortal:Q8IIU8 IntAct:Q8IIU8
MINT:MINT-1589838 PRIDE:Q8IIU8 EnsemblProtists:PF11_0065:mRNA
GeneID:810617 KEGG:pfa:PF11_0065 EuPathDB:PlasmoDB:PF3D7_1105400
ProtClustDB:PTZ00118 Uniprot:Q8IIU8
Length = 261
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 123/224 (54%), Positives = 166/224 (74%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
APK SSGPHK E +PL+++LRNRLKYALT+ EV IL+Q+ V VD KVRTD T+P G M
Sbjct: 28 APKTSSGPHKLLESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKVRTDCTFPVGLM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+ I K+NE FRLLYD KGRF H + +EE+K+KLCKV+ + + + T+DGR+I
Sbjct: 88 DVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCKVKKILLRKGRLSIAVTHDGRSI 147
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
Y P +K NDT++LDLE K+ + +KF VG++VMVT G + GRVG+I + +K+ G+++
Sbjct: 148 PYIHPDVKVNDTVRLDLETGKVLEHLKFQVGSLVMVTAGHSVGRVGVISSIDKNMGTYDI 207
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
IH++D+ FATRL NVF IG +KP++SLP+ KGIKL IIEE
Sbjct: 208 IHVKDSRNKVFATRLSNVFVIGDNTKPYISLPREKGIKLDIIEE 251
>UNIPROTKB|C9JQ55 [details] [associations]
symbol:RPS4XP21 "Protein RPS4XP21" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000876 PIRSF:PIRSF002116
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG1471
HOGENOM:HOG000231325 InterPro:IPR013845 InterPro:IPR013843
InterPro:IPR018199 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 PROSITE:PS00528 EMBL:AC016587 IPI:IPI00945801
ProteinModelPortal:C9JQ55 SMR:C9JQ55 STRING:C9JQ55 PaxDb:C9JQ55
PRIDE:C9JQ55 Ensembl:ENST00000469064 HGNC:HGNC:36228 OMA:WGRIGVI
OrthoDB:EOG4KSPMQ Bgee:C9JQ55 Uniprot:C9JQ55
Length = 273
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 126/223 (56%), Positives = 159/223 (71%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
A +PS+GP K RECLP I LRNRLKYALT EV I MQ + VDGKVRTD TYP GFM
Sbjct: 39 AARPSTGPQKLRECLPHIF-LRNRLKYALTGDEVKKICMQWFIKVDGKVRTDITYPTGFM 97
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT E FRL+Y RF +H + EE K+KLCK+R + KG P++ +D TI
Sbjct: 98 DVISIDKTGEGFRLIYGINCRFAVHRVTPEEVKYKLCKMRKIFVCTKGTPHLVIHDAHTI 157
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
R+PD LIK NDTI++DLE IT +KFD GN+ +VTGG N GR+G+I NRE+H GSF+T
Sbjct: 158 RHPDSLIKVNDTIQIDLETGNITA-LKFDTGNLCLVTGGANWGRIGVITNRERHPGSFDT 216
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 242
IH++DA + F+ +F I KG+KP +SLP+GKGI+ +I E
Sbjct: 217 IHVKDANSNSFSI----IFVIDKGNKPCISLPRGKGIRFTIAE 255
>UNIPROTKB|J9PAY7 [details] [associations]
symbol:J9PAY7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000876
PIRSF:PIRSF002116 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR013845 InterPro:IPR013843 PANTHER:PTHR11581
Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
GeneTree:ENSGT00390000005569 EMBL:AAEX03016779
Ensembl:ENSCAFT00000016353 Uniprot:J9PAY7
Length = 257
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 121/224 (54%), Positives = 156/224 (69%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP PS GP + L LI+ LRN LKYAL ++ I MQ +DGKV+TD TY AGFM
Sbjct: 28 APCPSIGP----QYLLLIIFLRNGLKYALI-GDIKKICMQGFK-IDGKVQTDITYSAGFM 81
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV S KT +NF L+YDTKG F +H + E+ K+KLCKVR G K IP++ T+D TI
Sbjct: 82 DVTSFDKTGKNFHLIYDTKGHFAVHWVIPEDTKYKLCKVRKFFVGTKEIPHLVTHDAFTI 141
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
Y D LIK NDTI++DL+ KI +FIKFD N+ M TG N G++G+I NRE+H GSF+
Sbjct: 142 CYLDSLIKVNDTIQIDLDSGKIPNFIKFDTSNLCMTTGDANLGKIGVITNRERHPGSFDV 201
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
+H++DA G+ FAT L N+F GKG+KPW++LP+GKGI +I EE
Sbjct: 202 VHVKDANGNSFATWLSNIFVSGKGNKPWITLPRGKGIHFTITEE 245
>UNIPROTKB|J9NUE9 [details] [associations]
symbol:J9NUE9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000876 InterPro:IPR002942 PROSITE:PS50889
SMART:SM00363 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 InterPro:IPR013845 InterPro:IPR013843
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
GeneTree:ENSGT00390000005569 EMBL:AAEX03002305
Ensembl:ENSCAFT00000047714 OMA:KECKYIL Uniprot:J9NUE9
Length = 190
Score = 536 (193.7 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
Identities = 101/157 (64%), Positives = 120/157 (76%)
Query: 21 PKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMD 80
P+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQ + +DGKV+TD TYPAGFMD
Sbjct: 29 PRPSTGPHKLRECLPLIIFLRNRLKYALTEDEVKKICMQHFIKIDGKVQTDITYPAGFMD 88
Query: 81 VVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIR 140
V+SI KT ENF L+YDTKG F +H + EEAK+KLCKVR + G KGIP++ T+D TI
Sbjct: 89 VISIDKTGENFHLIYDTKGHFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAHTIC 148
Query: 141 YPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 177
YPDPLIK NDTI++DLE KI DFIKFD ++ G
Sbjct: 149 YPDPLIKVNDTIQIDLETGKIMDFIKFDTVHVKDANG 185
Score = 57 (25.1 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
Identities = 9/16 (56%), Positives = 14/16 (87%)
Query: 197 FETIHIQDALGHEFAT 212
F+T+H++DA G+ FAT
Sbjct: 175 FDTVHVKDANGNSFAT 190
>UNIPROTKB|F1MZI5 [details] [associations]
symbol:F1MZI5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000876 InterPro:IPR002942 PIRSF:PIRSF002116
SMART:SM00363 Pfam:PF00467 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 InterPro:IPR005824 InterPro:IPR013845
InterPro:IPR013843 PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071
ProDom:PD002667 GeneTree:ENSGT00390000005569 EMBL:DAAA02036195
IPI:IPI00713872 Ensembl:ENSBTAT00000030506 Uniprot:F1MZI5
Length = 248
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 117/224 (52%), Positives = 149/224 (66%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP PS+ PHK RECLPLI+ LRNR ++ + I MQ + +DGKV TD YP GFM
Sbjct: 28 APHPSTSPHKLRECLPLIIFLRNR-------QDEVKICMQHVIKIDGKVCTDIIYPVGFM 80
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
DV+SI KT ENF L+YDTKGRF +H + + K+K CKVR + G KG P++ T+D
Sbjct: 81 DVISINKTQENFCLIYDTKGRFVVHRITLGKGKYK-CKVRKIFVGTKGTPHLVTHDAHIS 139
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 199
P P T ++LE KITDF K D GN+ MVTGG N GR+G+I N E+H GSF+
Sbjct: 140 ATPIP------TSIMNLETGKITDFTKCDTGNLCMVTGGANLGRIGVIINLERHPGSFDV 193
Query: 200 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
++++D G+ FAT L N+F IGKGSKPW+SL GKG L+I EE
Sbjct: 194 VYVKDTNGNSFATWLSNIFIIGKGSKPWLSL-SGKGTNLTIAEE 236
>UNIPROTKB|D4AEI1 [details] [associations]
symbol:D4AEI1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000876
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR013845
PANTHER:PTHR11581 Pfam:PF00900 ProDom:PD002667 OrthoDB:EOG4QC161
IPI:IPI00779459 Ensembl:ENSRNOT00000055733 Uniprot:D4AEI1
Length = 168
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 92/165 (55%), Positives = 115/165 (69%)
Query: 79 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 138
MDV+SI KT +NF L+YDTKG F +H + EE K+KLC+VR + G KGIP++ T D RT
Sbjct: 1 MDVISIDKTGKNFCLIYDTKGLFAVHQITPEEVKYKLCEVRKIFVGTKGIPHLVTQDART 60
Query: 139 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 198
IR P D DLE KITDFIKFD GN+ MVTGG N G +G+I NRE+H F+
Sbjct: 61 IRSPH-----QD----DLETGKITDFIKFDTGNLCMVTGGANLGTIGVIMNRERHPDPFD 111
Query: 199 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 243
H++ A G+ FAT L N+F IGKG+KPW+SLP+GK I L+I EE
Sbjct: 112 VAHVKGANGNSFATHLSNIFVIGKGNKPWISLPQGKRILLTIAEE 156
>UNIPROTKB|A6NH36 [details] [associations]
symbol:RPS4X "40S ribosomal protein S4, X isoform"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000876 InterPro:IPR002942 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 EMBL:AL135749 InterPro:IPR013845
InterPro:IPR013843 InterPro:IPR018199 PANTHER:PTHR11581
Pfam:PF00900 Pfam:PF08071 ProDom:PD002667 PROSITE:PS00528
HGNC:HGNC:10424 ChiTaRS:RPS4X IPI:IPI01024803
ProteinModelPortal:A6NH36 SMR:A6NH36 STRING:A6NH36 PRIDE:A6NH36
Ensembl:ENST00000373626 UCSC:uc011mqb.2 HOVERGEN:HBG105822
ArrayExpress:A6NH36 Bgee:A6NH36 Uniprot:A6NH36
Length = 122
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 68/93 (73%), Positives = 77/93 (82%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 112
DV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
>UNIPROTKB|J9NZZ7 [details] [associations]
symbol:J9NZZ7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000876 InterPro:IPR002942 PROSITE:PS50889
SMART:SM00363 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 InterPro:IPR013845 InterPro:IPR013843
PANTHER:PTHR11581 Pfam:PF00900 Pfam:PF08071 ProDom:PD002667
GeneTree:ENSGT00390000005569 EMBL:AAEX03015927
Ensembl:ENSCAFT00000049099 OMA:RVCIDIT Uniprot:J9NZZ7
Length = 125
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 66/97 (68%), Positives = 77/97 (79%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP+PS+G HK +ECLPLI+ LRNRLKYALT EV I MQ + +DGKVRTD TYPAGFM
Sbjct: 28 APRPSTGHHKLKECLPLIIFLRNRLKYALTGDEVKKIWMQHFIKIDGKVRTDTTYPAGFM 87
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 116
DV+SI KT ENFRL+YDTKGRF +H + EEAK +C
Sbjct: 88 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKV-IC 123
>UNIPROTKB|F1SNP4 [details] [associations]
symbol:RPS4XP21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000876 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR013845 PANTHER:PTHR11581
Pfam:PF00900 ProDom:PD002667 GeneTree:ENSGT00390000005569
EMBL:CU694832 Ensembl:ENSSSCT00000017684 Uniprot:F1SNP4
Length = 241
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 71/164 (43%), Positives = 92/164 (56%)
Query: 20 APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 79
AP PS+ R+ ++ LRN LKYALT + + +Q+ V +DGKV TD A M
Sbjct: 26 APHPSTDREPIRQQRMSLIFLRNTLKYALTGDSLRKVCLQQCVKIDGKVCTDL---ASVM 82
Query: 80 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 139
++SI KT E+ L+Y+TKG F +H + EE K K C R G +GIP T D +
Sbjct: 83 VIISIDKTEEDLGLIYNTKGHFSVHCITSEEGK-KSCNGRRNFVGTEGIPQWVT-DVHNV 140
Query: 140 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 183
DPL K DTI++ LE KI+DFIK D G TGG N GR
Sbjct: 141 SCSDPLSKMRDTIQIGLESGKISDFIKIDTG-----TGGVNLGR 179
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 54/130 (41%), Positives = 71/130 (54%)
Query: 114 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 173
K C R G +GIP T D + DPL K DTI++ LE KI+DFIK D G
Sbjct: 116 KSCNGRRNFVGTEGIPQWVT-DVHNVSCSDPLSKMRDTIQIGLESGKISDFIKIDTG--- 171
Query: 174 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 233
TGG N GR SFE +H++ G F T+ ++F IGKG+KPW+S P+
Sbjct: 172 --TGGVNLGRTS----------SFEVVHVKIGSGSSFITQPASIFMIGKGNKPWISPPQR 219
Query: 234 KGIKLSIIEE 243
KG+ LS+ +E
Sbjct: 220 KGVYLSVAKE 229
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.141 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 254 243 0.00097 113 3 11 22 0.41 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 50
No. of states in DFA: 585 (62 KB)
Total size of DFA: 175 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.22u 0.18s 20.40t Elapsed: 00:00:02
Total cpu time: 20.22u 0.18s 20.40t Elapsed: 00:00:02
Start: Fri May 10 05:51:10 2013 End: Fri May 10 05:51:12 2013