Your job contains 1 sequence.
>025356
MASNESSAENAECRDKKIVSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQ
NSVISITDKVSKFLNSLASHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAV
LPGDSVGGLVVANGIMSFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGI
IPPLGGTLDLSPILAFLVLNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQK
KWIRRLSNNRGKVL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025356
(254 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504956451 - symbol:YLMG2 "AT5G21920" species:3... 622 9.0e-61 1
TAIR|locus:2079656 - symbol:YLMG1-1 "AT3G07430" species:3... 208 6.7e-17 1
TAIR|locus:2132907 - symbol:YLMG1-2 "AT4G27990" species:3... 206 1.1e-16 1
UNIPROTKB|Q3AAH5 - symbol:CHY_2040 "Putative uncharacteri... 170 7.1e-13 1
TIGR_CMR|CHY_2040 - symbol:CHY_2040 "conserved hypothetic... 170 7.1e-13 1
UNIPROTKB|Q81WE1 - symbol:BAS3749 "YlmG protein" species:... 143 7.1e-10 1
TIGR_CMR|BA_4037 - symbol:BA_4037 "ylmG protein" species:... 143 7.1e-10 1
UNIPROTKB|Q47XY7 - symbol:CPS_3665 "YGGT family protein" ... 131 5.4e-08 1
TIGR_CMR|CPS_3665 - symbol:CPS_3665 "YGGT family protein"... 131 5.4e-08 1
UNIPROTKB|Q74EU3 - symbol:GSU0866 "Uncharacterized protei... 105 1.6e-05 1
TIGR_CMR|GSU_0866 - symbol:GSU_0866 "YGGT family protein"... 105 1.6e-05 1
UNIPROTKB|Q8EBZ0 - symbol:yggT "Inner membrane osmoregula... 109 0.00019 1
TIGR_CMR|SO_3355 - symbol:SO_3355 "conserved hypothetical... 109 0.00019 1
UNIPROTKB|Q71XY4 - symbol:LMOf2365_2061 "YGGT family prot... 95 0.00021 1
UNIPROTKB|Q608F8 - symbol:MCA1534 "YGGT family protein" s... 109 0.00025 1
TAIR|locus:2158906 - symbol:CCB3 "AT5G36120" species:3702... 107 0.00027 1
>TAIR|locus:504956451 [details] [associations]
symbol:YLMG2 "AT5G21920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR003425 Pfam:PF02325 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016020 EMBL:AC140977 EMBL:AL589883
KO:K02221 EMBL:BT005265 EMBL:AK118444 IPI:IPI00516557
RefSeq:NP_680180.1 UniGene:At.44737 UniGene:At.75172
EnsemblPlants:AT5G21920.1 GeneID:832252 KEGG:ath:AT5G21920
TAIR:At5g21920 HOGENOM:HOG000090706 InParanoid:Q9C595 OMA:MALPCEL
PhylomeDB:Q9C595 ProtClustDB:CLSN2690179 Genevestigator:Q9C595
Uniprot:Q9C595
Length = 251
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 128/192 (66%), Positives = 152/192 (79%)
Query: 25 LSSAFSQTPFVQPFFKPLLARNTVPVA-SPNIIRDLQNSVISITDKVSKFLNSLASHNPL 83
LSSAF+QTP V+ KP L PVA S +I+D S+IS T+K FL+SLAS NPL
Sbjct: 28 LSSAFTQTPLVRSN-KPNLLL-LPPVADSVKLIQDFHQSLISATEKFKGFLHSLASKNPL 85
Query: 84 IQKFLSLSAEFHSFCHQVRCRNNVKMN-PLGNHNFAAVLPGDSVGGLVVANGIMSFLNIY 142
Q+ + LS+EFH C ++R RN ++ + NH FAAVLPGDSV GLVVANG+++FLNIY
Sbjct: 86 FQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINFLNIY 145
Query: 143 NTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAI 202
NT+L+VRLVLTWFP++PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFLVLNA
Sbjct: 146 NTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFLVLNAF 204
Query: 203 TSAAAALPCELP 214
TS+A ALPCELP
Sbjct: 205 TSSAMALPCELP 216
>TAIR|locus:2079656 [details] [associations]
symbol:YLMG1-1 "AT3G07430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016020 "membrane"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0010020 "chloroplast fission" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0090143 "nucleoid
organization" evidence=IMP] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR003425 Pfam:PF02325
EMBL:CP002686 GO:GO:0009941 GO:GO:0010020 GO:GO:0042651
EMBL:AC009853 GO:GO:0090143 EMBL:AY099847 EMBL:BT006263
IPI:IPI00528367 RefSeq:NP_566307.1 UniGene:At.28189 STRING:Q9SRS3
PRIDE:Q9SRS3 DNASU:819931 EnsemblPlants:AT3G07430.1 GeneID:819931
KEGG:ath:AT3G07430 TAIR:At3g07430 InParanoid:Q9SRS3 OMA:PSLSIQN
PhylomeDB:Q9SRS3 ProtClustDB:CLSN2721564 ArrayExpress:Q9SRS3
Genevestigator:Q9SRS3 Uniprot:Q9SRS3
Length = 232
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 42/77 (54%), Positives = 57/77 (74%)
Query: 130 VVANGIMSFLNIYNTLLIVRLVLTWFPNSP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
VVA GI +L+IY+ +L+VR++L+WFPN P +S + LCDPYLN+FR IIPP+ T
Sbjct: 149 VVAVGIKKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDT 208
Query: 188 LDLSPILAFLVLNAITS 204
LD+SP+LAF VL + S
Sbjct: 209 LDVSPLLAFAVLGTLGS 225
>TAIR|locus:2132907 [details] [associations]
symbol:YLMG1-2 "AT4G27990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR003425
Pfam:PF02325 EMBL:CP002687 GO:GO:0016020 GO:GO:0009941
EMBL:AL161572 EMBL:AL035524 ProtClustDB:CLSN2721564 EMBL:AK226522
IPI:IPI00530022 PIR:T02900 RefSeq:NP_194528.1 UniGene:At.22789
PRIDE:Q9SUE0 EnsemblPlants:AT4G27990.1 GeneID:828912
KEGG:ath:AT4G27990 TAIR:At4g27990 InParanoid:Q9SUE0 OMA:SKWLDIY
PhylomeDB:Q9SUE0 ArrayExpress:Q9SUE0 Genevestigator:Q9SUE0
Uniprot:Q9SUE0
Length = 218
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 41/77 (53%), Positives = 57/77 (74%)
Query: 130 VVANGIMSFLNIYNTLLIVRLVLTWFPNSP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
VVA G+ +L+IY+ +L+VR++L+WFPN P +S + LCDPYLN+FR IIPP+ T
Sbjct: 135 VVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDT 194
Query: 188 LDLSPILAFLVLNAITS 204
LD+SP+LAF VL + S
Sbjct: 195 LDVSPLLAFAVLGTLGS 211
>UNIPROTKB|Q3AAH5 [details] [associations]
symbol:CHY_2040 "Putative uncharacterized protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0762 KO:K02221
HOGENOM:HOG000048869 RefSeq:YP_360859.1 STRING:Q3AAH5
GeneID:3727880 KEGG:chy:CHY_2040 PATRIC:21277161 OMA:NARESRF
ProtClustDB:CLSK842071 BioCyc:CHYD246194:GJCN-2039-MONOMER
Uniprot:Q3AAH5
Length = 87
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 140 NIYNTLLIVRLVLTWFP-NSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 198
NIY L+I+R++LTW P N+ +V+ +++L DPYLN+FR +IPP+G +D SPI+AF V
Sbjct: 13 NIYGWLIIIRVLLTWIPVNTYHPVVNFITSLTDPYLNLFRRLIPPVG-MIDFSPIVAFFV 71
Query: 199 LNAITSAAAAL 209
L + A L
Sbjct: 72 LEVMRMAVLQL 82
>TIGR_CMR|CHY_2040 [details] [associations]
symbol:CHY_2040 "conserved hypothetical protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0762 KO:K02221
HOGENOM:HOG000048869 RefSeq:YP_360859.1 STRING:Q3AAH5
GeneID:3727880 KEGG:chy:CHY_2040 PATRIC:21277161 OMA:NARESRF
ProtClustDB:CLSK842071 BioCyc:CHYD246194:GJCN-2039-MONOMER
Uniprot:Q3AAH5
Length = 87
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 140 NIYNTLLIVRLVLTWFP-NSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 198
NIY L+I+R++LTW P N+ +V+ +++L DPYLN+FR +IPP+G +D SPI+AF V
Sbjct: 13 NIYGWLIIIRVLLTWIPVNTYHPVVNFITSLTDPYLNLFRRLIPPVG-MIDFSPIVAFFV 71
Query: 199 LNAITSAAAAL 209
L + A L
Sbjct: 72 LEVMRMAVLQL 82
>UNIPROTKB|Q81WE1 [details] [associations]
symbol:BAS3749 "YlmG protein" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003425
Pfam:PF02325 GO:GO:0016020 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR KO:K02221 HOGENOM:HOG000048869
RefSeq:NP_846277.1 RefSeq:YP_020679.1 RefSeq:YP_030000.1
TCDB:9.A.4.2.1 DNASU:1086657 EnsemblBacteria:EBBACT00000008750
EnsemblBacteria:EBBACT00000013883 EnsemblBacteria:EBBACT00000023912
GeneID:1086657 GeneID:2817303 GeneID:2848061 KEGG:ban:BA_4037
KEGG:bar:GBAA_4037 KEGG:bat:BAS3749 OMA:LATICEP
ProtClustDB:CLSK917205 BioCyc:BANT260799:GJAJ-3807-MONOMER
BioCyc:BANT261594:GJ7F-3925-MONOMER Uniprot:Q81WE1
Length = 87
Score = 143 (55.4 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 135 IMSFLNIYNTLLIVRLVLTWFPNSPPAIVSP-LSTLCDPYLNIFRGIIPPLGGTLDLSPI 193
+++ + IY+ LI+ ++L+WFP + + L+ +C+PYL FR IPPLG +D+SP+
Sbjct: 8 LVTAIEIYSWALIIYILLSWFPGAKESTFGDFLARICEPYLEPFRRFIPPLG-MIDISPL 66
Query: 194 LAFLVLNAITSAAAAL 209
+A L TS L
Sbjct: 67 VAIFALKLATSGLVTL 82
>TIGR_CMR|BA_4037 [details] [associations]
symbol:BA_4037 "ylmG protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003425
Pfam:PF02325 GO:GO:0016020 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR KO:K02221 HOGENOM:HOG000048869
RefSeq:NP_846277.1 RefSeq:YP_020679.1 RefSeq:YP_030000.1
TCDB:9.A.4.2.1 DNASU:1086657 EnsemblBacteria:EBBACT00000008750
EnsemblBacteria:EBBACT00000013883 EnsemblBacteria:EBBACT00000023912
GeneID:1086657 GeneID:2817303 GeneID:2848061 KEGG:ban:BA_4037
KEGG:bar:GBAA_4037 KEGG:bat:BAS3749 OMA:LATICEP
ProtClustDB:CLSK917205 BioCyc:BANT260799:GJAJ-3807-MONOMER
BioCyc:BANT261594:GJ7F-3925-MONOMER Uniprot:Q81WE1
Length = 87
Score = 143 (55.4 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 135 IMSFLNIYNTLLIVRLVLTWFPNSPPAIVSP-LSTLCDPYLNIFRGIIPPLGGTLDLSPI 193
+++ + IY+ LI+ ++L+WFP + + L+ +C+PYL FR IPPLG +D+SP+
Sbjct: 8 LVTAIEIYSWALIIYILLSWFPGAKESTFGDFLARICEPYLEPFRRFIPPLG-MIDISPL 66
Query: 194 LAFLVLNAITSAAAAL 209
+A L TS L
Sbjct: 67 VAIFALKLATSGLVTL 82
>UNIPROTKB|Q47XY7 [details] [associations]
symbol:CPS_3665 "YGGT family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0762 HOGENOM:HOG000257384
KO:K02221 OMA:MIDFSPM RefSeq:YP_270333.1 STRING:Q47XY7
GeneID:3519056 KEGG:cps:CPS_3665 PATRIC:21470257
BioCyc:CPSY167879:GI48-3687-MONOMER Uniprot:Q47XY7
Length = 181
Score = 131 (51.2 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 32/88 (36%), Positives = 51/88 (57%)
Query: 119 AVLPGDSVGGLVVANGIMSFLN----IYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYL 174
A L G+S+G L G++ L + ++I+ +++W + + LS L +P+L
Sbjct: 81 AALSGESLGVLAFYIGLLVLLKQAGFLLFVIMIIMAIMSWVVQGYNSTLMVLSQLTEPFL 140
Query: 175 NIFRGIIPPLGGTLDLSPILAFLVLNAI 202
N R IIP +GG LDLS +LAFL++N I
Sbjct: 141 NPIRKIIPNMGG-LDLSMLLAFLLMNVI 167
>TIGR_CMR|CPS_3665 [details] [associations]
symbol:CPS_3665 "YGGT family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0762 HOGENOM:HOG000257384
KO:K02221 OMA:MIDFSPM RefSeq:YP_270333.1 STRING:Q47XY7
GeneID:3519056 KEGG:cps:CPS_3665 PATRIC:21470257
BioCyc:CPSY167879:GI48-3687-MONOMER Uniprot:Q47XY7
Length = 181
Score = 131 (51.2 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 32/88 (36%), Positives = 51/88 (57%)
Query: 119 AVLPGDSVGGLVVANGIMSFLN----IYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYL 174
A L G+S+G L G++ L + ++I+ +++W + + LS L +P+L
Sbjct: 81 AALSGESLGVLAFYIGLLVLLKQAGFLLFVIMIIMAIMSWVVQGYNSTLMVLSQLTEPFL 140
Query: 175 NIFRGIIPPLGGTLDLSPILAFLVLNAI 202
N R IIP +GG LDLS +LAFL++N I
Sbjct: 141 NPIRKIIPNMGG-LDLSMLLAFLLMNVI 167
>UNIPROTKB|Q74EU3 [details] [associations]
symbol:GSU0866 "Uncharacterized protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020 EMBL:AE017180
GenomeReviews:AE017180_GR KO:K02221 HOGENOM:HOG000048869
RefSeq:NP_951923.1 GeneID:2685425 KEGG:gsu:GSU0866 PATRIC:22024497
OMA:ALFQTID ProtClustDB:CLSK924445
BioCyc:GSUL243231:GH27-836-MONOMER Uniprot:Q74EU3
Length = 104
Score = 105 (42.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 129 LVVANGIMSFLNIYNTLLIVRLVLTWF-PNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
L +A L IY ++I R +++W P+ IV+ L +P L+ R I+P LGG
Sbjct: 9 LAIAKVADILLTIYLYIIIARAIISWVNPDPYNPIVNFLYRSTEPVLSRVRRILPDLGG- 67
Query: 188 LDLSPILAFLVLNAITS 204
LDLSPIL + + I S
Sbjct: 68 LDLSPILVLVAIYFIQS 84
>TIGR_CMR|GSU_0866 [details] [associations]
symbol:GSU_0866 "YGGT family protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020 EMBL:AE017180
GenomeReviews:AE017180_GR KO:K02221 HOGENOM:HOG000048869
RefSeq:NP_951923.1 GeneID:2685425 KEGG:gsu:GSU0866 PATRIC:22024497
OMA:ALFQTID ProtClustDB:CLSK924445
BioCyc:GSUL243231:GH27-836-MONOMER Uniprot:Q74EU3
Length = 104
Score = 105 (42.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 129 LVVANGIMSFLNIYNTLLIVRLVLTWF-PNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
L +A L IY ++I R +++W P+ IV+ L +P L+ R I+P LGG
Sbjct: 9 LAIAKVADILLTIYLYIIIARAIISWVNPDPYNPIVNFLYRSTEPVLSRVRRILPDLGG- 67
Query: 188 LDLSPILAFLVLNAITS 204
LDLSPIL + + I S
Sbjct: 68 LDLSPILVLVAIYFIQS 84
>UNIPROTKB|Q8EBZ0 [details] [associations]
symbol:yggT "Inner membrane osmoregulator protein YggT"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000257384 KO:K02221
OMA:MIDFSPM RefSeq:NP_718909.1 GeneID:1171036 KEGG:son:SO_3355
PATRIC:23526384 ProtClustDB:CLSK907126 Uniprot:Q8EBZ0
Length = 182
Score = 109 (43.4 bits), Expect = 0.00019, P = 0.00019
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 145 LLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITS 204
+LI+R +L+WF IV + L +P L R IIPP+GG LDLS +L + +N I
Sbjct: 112 MLIIRAILSWFNQGYNPIVMIMGQLTEPLLAPVRRIIPPIGG-LDLSVMLVIIGMNFINM 170
Query: 205 AAA 207
A
Sbjct: 171 LLA 173
>TIGR_CMR|SO_3355 [details] [associations]
symbol:SO_3355 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000257384 KO:K02221
OMA:MIDFSPM RefSeq:NP_718909.1 GeneID:1171036 KEGG:son:SO_3355
PATRIC:23526384 ProtClustDB:CLSK907126 Uniprot:Q8EBZ0
Length = 182
Score = 109 (43.4 bits), Expect = 0.00019, P = 0.00019
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 145 LLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAITS 204
+LI+R +L+WF IV + L +P L R IIPP+GG LDLS +L + +N I
Sbjct: 112 MLIIRAILSWFNQGYNPIVMIMGQLTEPLLAPVRRIIPPIGG-LDLSVMLVIIGMNFINM 170
Query: 205 AAA 207
A
Sbjct: 171 LLA 173
>UNIPROTKB|Q71XY4 [details] [associations]
symbol:LMOf2365_2061 "YGGT family protein" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020
EMBL:AE017262 GenomeReviews:AE017262_GR eggNOG:COG0762 KO:K02221
HOGENOM:HOG000048869 RefSeq:YP_014654.1 STRING:Q71XY4
GeneID:2799131 KEGG:lmf:LMOf2365_2061 PATRIC:20325417 OMA:VILFVIR
ProtClustDB:CLSK564720 Uniprot:Q71XY4
Length = 96
Score = 95 (38.5 bits), Expect = 0.00021, P = 0.00021
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 144 TLLIVRLVLTWFPNSPPAIVSP-LSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 198
TL+ + +++WFP + + + L+ + +P L FR IIPP+G D+S ++A+ +
Sbjct: 21 TLMFIYFLMSWFPGARESKIGQFLARIFEPILEPFRRIIPPIG-MFDISSLVAYFI 75
>UNIPROTKB|Q608F8 [details] [associations]
symbol:MCA1534 "YGGT family protein" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE017282 RefSeq:YP_113989.1 GeneID:3102210
GenomeReviews:AE017282_GR KEGG:mca:MCA1534 PATRIC:22606908
HOGENOM:HOG000257384 KO:K02221 OMA:MIDFSPM GO:GO:0016020
InterPro:IPR003425 Pfam:PF02325 Uniprot:Q608F8
Length = 192
Score = 109 (43.4 bits), Expect = 0.00025, P = 0.00025
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 125 SVGGLVV--ANGIMSFL-NIYNTLLIVRLVLTWFPNSP--PAIVSPLSTLCDPYLNIFRG 179
SV L V + ++ + NI+ +I R +L+WF P PA S L++L +P L + R
Sbjct: 96 SVAALAVWSVHDLLDLVFNIFFFCIIARALLSWFGRMPYHPA-ASLLTSLTEPLLRLSRR 154
Query: 180 IIPPLGGTLDLSPILAFL 197
++PP GG LD SP+L +
Sbjct: 155 LLPPAGG-LDFSPLLPLI 171
>TAIR|locus:2158906 [details] [associations]
symbol:CCB3 "AT5G36120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0010190 "cytochrome b6f complex assembly" evidence=IMP]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0043085 "positive regulation of catalytic
activity" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR003425
Pfam:PF02325 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009535
GO:GO:0010190 eggNOG:COG0762 EMBL:AY092993 EMBL:AY114603
EMBL:AK221434 IPI:IPI00528870 RefSeq:NP_198461.2 UniGene:At.30557
STRING:Q8RWM7 PaxDb:Q8RWM7 PRIDE:Q8RWM7 EnsemblPlants:AT5G36120.1
GeneID:833608 KEGG:ath:AT5G36120 TAIR:At5g36120
HOGENOM:HOG000149119 InParanoid:Q8RWM7 OMA:KVIPPLA PhylomeDB:Q8RWM7
ProtClustDB:CLSN2690212 ArrayExpress:Q8RWM7 Genevestigator:Q8RWM7
Uniprot:Q8RWM7
Length = 174
Score = 107 (42.7 bits), Expect = 0.00027, P = 0.00027
Identities = 35/120 (29%), Positives = 65/120 (54%)
Query: 82 PLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAVLPGDSVGGLVVANGIMS-FLN 140
P++ LS E + + +R N++ + L N + A + PG + +A GI+ L+
Sbjct: 37 PIVSATLSHIEEAATTTNLIRQTNSISES-LRNISLADLDPGTAK----LAIGILGPALS 91
Query: 141 IYNTLLIVRLVLTWFPNSP----PAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAF 196
+ L I+R+V++W+P P P +++ T +P L R +IPPL G +D++P++ F
Sbjct: 92 AFGFLFILRIVMSWYPKLPVDKFPYVLAYAPT--EPILVQTRKVIPPLAG-VDVTPVVWF 148
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 254 240 0.00093 113 3 11 22 0.39 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 603 (64 KB)
Total size of DFA: 175 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.51u 0.12s 20.63t Elapsed: 00:00:01
Total cpu time: 20.51u 0.12s 20.63t Elapsed: 00:00:01
Start: Fri May 10 05:54:55 2013 End: Fri May 10 05:54:56 2013