Query 025358
Match_columns 254
No_of_seqs 157 out of 1266
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 08:43:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025358.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025358hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 99.8 8.5E-18 2.9E-22 153.0 21.3 213 2-250 155-373 (425)
2 4dgk_A Phytoene dehydrogenase; 99.7 3.7E-16 1.2E-20 145.3 16.0 173 38-233 213-410 (501)
3 3nrn_A Uncharacterized protein 99.7 3.8E-15 1.3E-19 135.7 21.2 193 2-230 148-342 (421)
4 3nks_A Protoporphyrinogen oxid 99.6 9.4E-14 3.2E-18 128.1 18.5 219 1-252 162-420 (477)
5 4gde_A UDP-galactopyranose mut 99.5 5.4E-14 1.8E-18 130.7 14.5 224 1-254 161-425 (513)
6 4dsg_A UDP-galactopyranose mut 99.5 1.8E-13 6.2E-18 127.6 17.3 223 1-253 155-400 (484)
7 3i6d_A Protoporphyrinogen oxid 99.5 1.8E-13 6E-18 125.6 15.5 219 1-252 168-414 (470)
8 3lov_A Protoporphyrinogen oxid 99.5 4.4E-13 1.5E-17 123.8 12.9 213 1-252 166-411 (475)
9 1s3e_A Amine oxidase [flavin-c 99.4 9.5E-13 3.3E-17 123.2 14.8 217 2-250 165-391 (520)
10 2ivd_A PPO, PPOX, protoporphyr 99.4 3.9E-12 1.3E-16 117.4 18.2 217 1-250 167-418 (478)
11 2vvm_A Monoamine oxidase N; FA 99.3 3.1E-11 1.1E-15 112.0 14.6 208 1-246 206-420 (495)
12 1sez_A Protoporphyrinogen oxid 99.3 2.1E-11 7.1E-16 113.3 12.6 221 1-250 168-438 (504)
13 2yg5_A Putrescine oxidase; oxi 99.2 1.8E-11 6.3E-16 112.1 9.9 209 2-245 165-384 (453)
14 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 3.7E-10 1.3E-14 99.8 15.2 179 42-252 108-293 (342)
15 1b37_A Protein (polyamine oxid 99.1 1.4E-10 4.9E-15 107.1 9.4 177 41-246 201-393 (472)
16 2jae_A L-amino acid oxidase; o 99.0 1E-09 3.5E-14 101.6 11.3 181 37-250 230-418 (489)
17 3p1w_A Rabgdi protein; GDI RAB 98.9 2.2E-09 7.5E-14 99.7 8.1 91 13-111 220-313 (475)
18 2iid_A L-amino-acid oxidase; f 98.7 4.9E-07 1.7E-11 83.6 15.2 159 37-228 232-398 (498)
19 1d5t_A Guanine nucleotide diss 98.7 3.6E-07 1.2E-11 83.7 14.0 90 13-112 198-290 (433)
20 1vg0_A RAB proteins geranylger 98.6 5.2E-06 1.8E-10 79.6 20.6 113 17-150 346-461 (650)
21 4gut_A Lysine-specific histone 98.5 5.9E-07 2E-11 88.1 10.3 165 53-245 536-710 (776)
22 2z3y_A Lysine-specific histone 98.4 9.7E-07 3.3E-11 85.1 11.5 173 39-249 394-582 (662)
23 2xag_A Lysine-specific histone 98.4 1.1E-06 3.8E-11 87.0 10.4 173 39-249 565-753 (852)
24 3k7m_X 6-hydroxy-L-nicotine ox 98.4 1.9E-05 6.7E-10 71.2 17.6 129 4-149 162-296 (431)
25 1yvv_A Amine oxidase, flavin-c 98.3 1.3E-05 4.5E-10 69.7 14.8 146 51-228 110-258 (336)
26 2b9w_A Putative aminooxidase; 98.3 3.5E-06 1.2E-10 76.1 11.0 94 11-119 170-265 (424)
27 2bcg_G Secretory pathway GDP d 98.1 1.1E-05 3.6E-10 74.2 10.3 66 36-111 232-299 (453)
28 1rsg_A FMS1 protein; FAD bindi 98.0 8.9E-06 3E-10 75.8 7.1 96 40-149 197-305 (516)
29 3hdq_A UDP-galactopyranose mut 97.9 4.1E-06 1.4E-10 76.0 2.2 110 1-148 175-287 (397)
30 1i8t_A UDP-galactopyranose mut 97.7 1.2E-06 4.2E-11 78.4 -3.5 110 1-148 147-259 (367)
31 3dje_A Fructosyl amine: oxygen 97.4 0.00038 1.3E-08 62.9 8.2 57 48-112 162-221 (438)
32 1v0j_A UDP-galactopyranose mut 97.4 2.4E-06 8.1E-11 77.3 -6.8 113 1-148 157-273 (399)
33 2bi7_A UDP-galactopyranose mut 97.3 1.6E-05 5.4E-10 71.6 -2.3 107 1-147 151-261 (384)
34 3fg2_P Putative rubredoxin red 97.2 0.00097 3.3E-08 59.9 7.9 58 46-111 183-240 (404)
35 3lxd_A FAD-dependent pyridine 97.2 0.0011 3.7E-08 59.8 8.2 58 46-111 193-250 (415)
36 3ayj_A Pro-enzyme of L-phenyla 97.0 0.0017 5.8E-08 63.0 8.7 106 36-145 337-483 (721)
37 1ryi_A Glycine oxidase; flavop 97.0 0.0061 2.1E-07 53.6 11.5 55 48-112 165-219 (382)
38 2i0z_A NAD(FAD)-utilizing dehy 96.9 0.0019 6.6E-08 58.9 7.8 59 46-112 133-191 (447)
39 3dme_A Conserved exported prot 96.9 0.0018 6.2E-08 56.4 7.2 57 48-112 151-209 (369)
40 3nlc_A Uncharacterized protein 96.8 0.0023 7.7E-08 60.3 7.6 57 48-112 221-277 (549)
41 1y56_B Sarcosine oxidase; dehy 96.8 0.0029 9.8E-08 55.8 7.8 56 48-112 150-205 (382)
42 3nyc_A D-arginine dehydrogenas 96.8 0.0019 6.6E-08 56.6 6.4 55 48-112 155-209 (381)
43 4at0_A 3-ketosteroid-delta4-5a 96.8 0.0024 8.3E-08 59.2 7.3 57 48-110 203-262 (510)
44 3ef6_A Toluene 1,2-dioxygenase 96.6 0.0032 1.1E-07 56.7 6.3 56 47-111 185-240 (410)
45 2gag_B Heterotetrameric sarcos 96.6 0.0045 1.5E-07 54.9 7.1 56 48-112 175-230 (405)
46 3cgv_A Geranylgeranyl reductas 96.5 0.0047 1.6E-07 54.5 7.0 65 48-117 103-168 (397)
47 1trb_A Thioredoxin reductase; 96.4 0.0081 2.8E-07 51.4 7.8 60 48-112 185-247 (320)
48 3axb_A Putative oxidoreductase 96.4 0.0049 1.7E-07 55.7 6.7 56 48-112 182-254 (448)
49 3ps9_A TRNA 5-methylaminomethy 96.4 0.0061 2.1E-07 58.5 7.6 56 48-112 418-473 (676)
50 3iwa_A FAD-dependent pyridine 96.4 0.01 3.5E-07 54.2 8.7 58 45-111 200-257 (472)
51 1y0p_A Fumarate reductase flav 96.4 0.0086 3E-07 56.3 8.3 59 47-110 255-315 (571)
52 1q1r_A Putidaredoxin reductase 96.4 0.0079 2.7E-07 54.5 7.7 56 47-110 191-248 (431)
53 3da1_A Glycerol-3-phosphate de 96.3 0.008 2.7E-07 56.6 7.8 65 48-117 171-239 (561)
54 3atr_A Conserved archaeal prot 96.3 0.016 5.5E-07 52.6 9.4 66 48-118 101-169 (453)
55 3pvc_A TRNA 5-methylaminomethy 96.3 0.0075 2.6E-07 58.1 7.4 56 48-112 413-469 (689)
56 2cdu_A NADPH oxidase; flavoenz 96.3 0.0072 2.4E-07 55.0 6.9 58 45-111 189-246 (452)
57 1d4d_A Flavocytochrome C fumar 96.2 0.015 5E-07 54.8 8.9 59 47-110 255-315 (572)
58 1qo8_A Flavocytochrome C3 fuma 96.1 0.013 4.4E-07 55.1 8.1 60 47-111 250-311 (566)
59 1pj5_A N,N-dimethylglycine oxi 96.1 0.01 3.4E-07 58.4 7.6 56 48-112 152-207 (830)
60 2rgh_A Alpha-glycerophosphate 96.1 0.013 4.4E-07 55.3 8.0 60 48-112 189-250 (571)
61 2uzz_A N-methyl-L-tryptophan o 96.1 0.013 4.4E-07 51.3 7.4 60 48-118 150-209 (372)
62 2cul_A Glucose-inhibited divis 96.0 0.014 4.9E-07 48.1 6.8 56 48-112 69-125 (232)
63 3oc4_A Oxidoreductase, pyridin 96.0 0.014 4.6E-07 53.2 7.2 58 45-112 187-244 (452)
64 1mo9_A ORF3; nucleotide bindin 96.0 0.015 5E-07 54.1 7.5 58 46-110 254-314 (523)
65 2wpf_A Trypanothione reductase 95.9 0.015 5E-07 53.8 7.3 58 46-111 234-291 (495)
66 1m6i_A Programmed cell death p 95.9 0.016 5.6E-07 53.4 7.5 57 46-111 225-281 (493)
67 2hqm_A GR, grase, glutathione 95.9 0.015 5E-07 53.4 7.1 58 46-110 225-283 (479)
68 2v3a_A Rubredoxin reductase; a 95.9 0.017 5.8E-07 51.3 7.2 57 46-111 186-242 (384)
69 2wdq_A Succinate dehydrogenase 95.8 0.022 7.6E-07 53.9 8.3 60 48-111 144-205 (588)
70 1fec_A Trypanothione reductase 95.8 0.017 5.7E-07 53.3 7.2 58 46-111 230-287 (490)
71 3o0h_A Glutathione reductase; 95.8 0.019 6.5E-07 52.7 7.5 57 46-111 231-287 (484)
72 2qcu_A Aerobic glycerol-3-phos 95.8 0.021 7E-07 52.8 7.7 59 48-112 150-210 (501)
73 2gf3_A MSOX, monomeric sarcosi 95.8 0.023 8E-07 49.8 7.8 55 48-112 151-205 (389)
74 1xdi_A RV3303C-LPDA; reductase 95.8 0.022 7.6E-07 52.4 7.9 58 46-112 222-279 (499)
75 3v76_A Flavoprotein; structura 95.7 0.014 4.8E-07 52.9 6.2 56 47-112 132-187 (417)
76 2x3n_A Probable FAD-dependent 95.7 0.016 5.6E-07 51.4 6.5 63 48-118 108-173 (399)
77 2ywl_A Thioredoxin reductase r 95.7 0.016 5.6E-07 45.4 5.8 54 47-111 56-109 (180)
78 3itj_A Thioredoxin reductase 1 95.7 0.018 6.1E-07 49.4 6.5 58 50-112 211-271 (338)
79 3nix_A Flavoprotein/dehydrogen 95.7 0.019 6.6E-07 51.1 6.8 64 48-118 107-173 (421)
80 2e4g_A Tryptophan halogenase; 95.7 0.023 7.7E-07 53.2 7.5 63 48-118 195-260 (550)
81 4dna_A Probable glutathione re 95.7 0.019 6.4E-07 52.4 6.8 57 46-111 210-267 (463)
82 2weu_A Tryptophan 5-halogenase 95.7 0.028 9.7E-07 51.7 8.0 63 48-118 174-238 (511)
83 3e1t_A Halogenase; flavoprotei 95.7 0.031 1.1E-06 51.7 8.3 64 48-117 112-178 (512)
84 2bs2_A Quinol-fumarate reducta 95.7 0.031 1.1E-06 53.7 8.5 59 48-111 159-219 (660)
85 3cty_A Thioredoxin reductase; 95.6 0.029 9.8E-07 48.0 7.5 57 50-111 193-251 (319)
86 2gmh_A Electron transfer flavo 95.5 0.039 1.3E-06 52.1 8.5 61 48-112 145-217 (584)
87 2oln_A NIKD protein; flavoprot 95.4 0.032 1.1E-06 49.3 7.3 54 48-111 154-207 (397)
88 1ges_A Glutathione reductase; 95.4 0.028 9.5E-07 51.1 7.0 57 46-110 207-263 (450)
89 2h88_A Succinate dehydrogenase 95.3 0.035 1.2E-06 52.9 7.6 59 48-111 156-216 (621)
90 2bc0_A NADH oxidase; flavoprot 95.3 0.028 9.7E-07 51.7 6.5 56 46-111 235-290 (490)
91 3r9u_A Thioredoxin reductase; 95.3 0.033 1.1E-06 47.2 6.5 55 51-111 187-243 (315)
92 1onf_A GR, grase, glutathione 95.2 0.043 1.5E-06 50.6 7.5 58 46-111 216-274 (500)
93 2zbw_A Thioredoxin reductase; 95.1 0.081 2.8E-06 45.3 8.7 58 48-111 192-251 (335)
94 2r9z_A Glutathione amide reduc 95.1 0.046 1.6E-06 49.9 7.3 56 46-110 206-262 (463)
95 1k0i_A P-hydroxybenzoate hydro 95.1 0.065 2.2E-06 47.3 8.2 64 48-119 104-171 (394)
96 3cgb_A Pyridine nucleotide-dis 95.1 0.058 2E-06 49.4 8.0 56 46-111 226-281 (480)
97 3ab1_A Ferredoxin--NADP reduct 95.0 0.038 1.3E-06 48.1 6.4 58 48-111 203-262 (360)
98 2yqu_A 2-oxoglutarate dehydrog 95.0 0.043 1.5E-06 49.8 6.9 56 47-111 208-263 (455)
99 1fl2_A Alkyl hydroperoxide red 95.0 0.074 2.5E-06 45.1 7.9 56 51-111 183-241 (310)
100 2aqj_A Tryptophan halogenase, 95.0 0.054 1.9E-06 50.3 7.6 57 48-112 166-222 (538)
101 1nhp_A NADH peroxidase; oxidor 94.9 0.04 1.4E-06 49.9 6.4 56 46-111 190-245 (447)
102 1zk7_A HGII, reductase, mercur 94.9 0.067 2.3E-06 48.7 7.9 56 46-111 215-270 (467)
103 3ics_A Coenzyme A-disulfide re 94.9 0.052 1.8E-06 51.0 7.2 54 46-110 227-280 (588)
104 2gqw_A Ferredoxin reductase; f 94.9 0.057 1.9E-06 48.4 7.2 52 46-110 186-237 (408)
105 3lad_A Dihydrolipoamide dehydr 94.9 0.081 2.8E-06 48.2 8.4 59 46-111 220-279 (476)
106 3h8l_A NADH oxidase; membrane 94.9 0.035 1.2E-06 49.5 5.8 52 46-110 217-268 (409)
107 2gqf_A Hypothetical protein HI 94.8 0.06 2.1E-06 48.3 7.3 57 46-112 108-168 (401)
108 1kf6_A Fumarate reductase flav 94.8 0.059 2E-06 51.1 7.4 59 48-111 135-196 (602)
109 1zmd_A Dihydrolipoyl dehydroge 94.7 0.1 3.5E-06 47.5 8.5 61 46-111 219-281 (474)
110 2pyx_A Tryptophan halogenase; 94.5 0.096 3.3E-06 48.5 8.0 63 48-118 176-241 (526)
111 3c4n_A Uncharacterized protein 94.4 0.021 7E-07 51.1 3.1 55 48-112 173-236 (405)
112 4g6h_A Rotenone-insensitive NA 94.4 0.072 2.5E-06 49.3 6.8 57 45-110 270-330 (502)
113 1rp0_A ARA6, thiazole biosynth 94.4 0.11 3.8E-06 44.0 7.5 59 48-111 120-190 (284)
114 3i3l_A Alkylhalidase CMLS; fla 94.4 0.1 3.4E-06 49.4 7.9 63 48-117 129-194 (591)
115 1ebd_A E3BD, dihydrolipoamide 94.3 0.087 3E-06 47.7 7.2 60 46-111 210-269 (455)
116 1ojt_A Surface protein; redox- 94.3 0.055 1.9E-06 49.6 5.8 60 46-111 225-285 (482)
117 2q0l_A TRXR, thioredoxin reduc 94.2 0.13 4.5E-06 43.5 7.6 56 51-111 182-240 (311)
118 1v59_A Dihydrolipoamide dehydr 94.2 0.12 4E-06 47.2 7.7 60 46-111 223-286 (478)
119 3alj_A 2-methyl-3-hydroxypyrid 94.1 0.085 2.9E-06 46.4 6.5 59 48-118 108-167 (379)
120 2zxi_A TRNA uridine 5-carboxym 94.1 0.096 3.3E-06 50.0 7.1 56 48-112 124-180 (637)
121 4a9w_A Monooxygenase; baeyer-v 94.1 0.084 2.9E-06 45.3 6.3 57 47-112 76-132 (357)
122 1y56_A Hypothetical protein PH 94.1 0.06 2.1E-06 49.6 5.5 62 36-111 251-312 (493)
123 3lzw_A Ferredoxin--NADP reduct 94.0 0.064 2.2E-06 45.7 5.4 56 50-111 192-249 (332)
124 3urh_A Dihydrolipoyl dehydroge 94.0 0.17 5.8E-06 46.3 8.5 60 46-111 238-299 (491)
125 2q7v_A Thioredoxin reductase; 94.0 0.16 5.4E-06 43.4 7.8 55 51-111 191-248 (325)
126 2a8x_A Dihydrolipoyl dehydroge 94.0 0.14 4.6E-06 46.6 7.7 58 46-111 211-270 (464)
127 1dxl_A Dihydrolipoamide dehydr 94.0 0.14 4.8E-06 46.5 7.7 60 46-111 217-278 (470)
128 3f8d_A Thioredoxin reductase ( 93.9 0.16 5.3E-06 43.0 7.5 54 52-111 194-250 (323)
129 2qa2_A CABE, polyketide oxygen 93.9 0.17 5.7E-06 46.7 8.1 62 48-118 108-173 (499)
130 3dk9_A Grase, GR, glutathione 93.8 0.17 6E-06 46.0 8.1 61 46-110 227-291 (478)
131 3dgh_A TRXR-1, thioredoxin red 93.8 0.11 3.9E-06 47.4 6.9 60 46-110 226-287 (483)
132 3ntd_A FAD-dependent pyridine 93.7 0.14 4.7E-06 47.6 7.4 56 47-110 192-265 (565)
133 2qa1_A PGAE, polyketide oxygen 93.7 0.17 5.7E-06 46.7 7.8 62 48-118 107-172 (500)
134 1n4w_A CHOD, cholesterol oxida 93.7 0.083 2.8E-06 48.8 5.7 57 51-111 225-287 (504)
135 4eqs_A Coenzyme A disulfide re 93.7 0.13 4.3E-06 46.6 6.9 52 46-110 187-238 (437)
136 3ces_A MNMG, tRNA uridine 5-ca 93.6 0.11 3.8E-06 49.7 6.6 56 48-112 125-181 (651)
137 2eq6_A Pyruvate dehydrogenase 93.5 0.21 7.1E-06 45.4 8.1 56 47-110 210-269 (464)
138 3ihg_A RDME; flavoenzyme, anth 93.5 0.17 5.9E-06 46.8 7.6 67 48-118 121-190 (535)
139 3dgz_A Thioredoxin reductase 2 93.4 0.25 8.6E-06 45.2 8.4 61 46-111 224-286 (488)
140 1chu_A Protein (L-aspartate ox 93.3 0.13 4.6E-06 47.9 6.5 61 48-111 139-207 (540)
141 3oz2_A Digeranylgeranylglycero 93.2 0.18 6.2E-06 43.8 7.0 65 48-117 103-168 (397)
142 3h28_A Sulfide-quinone reducta 93.0 0.13 4.3E-06 46.3 5.8 52 49-110 202-254 (430)
143 1vdc_A NTR, NADPH dependent th 93.0 0.26 8.8E-06 42.1 7.5 58 51-111 198-258 (333)
144 2qae_A Lipoamide, dihydrolipoy 92.9 0.28 9.6E-06 44.5 8.0 59 46-111 214-275 (468)
145 2e5v_A L-aspartate oxidase; ar 92.9 0.17 5.8E-06 46.3 6.5 57 48-112 120-176 (472)
146 1coy_A Cholesterol oxidase; ox 92.9 0.17 5.9E-06 46.7 6.5 57 51-111 230-292 (507)
147 3fmw_A Oxygenase; mithramycin, 92.6 0.1 3.6E-06 49.0 4.7 64 48-118 149-214 (570)
148 3k30_A Histamine dehydrogenase 92.6 0.17 5.8E-06 48.6 6.3 56 48-111 568-623 (690)
149 1jnr_A Adenylylsulfate reducta 92.4 0.32 1.1E-05 46.4 7.8 62 48-111 152-217 (643)
150 1xhc_A NADH oxidase /nitrite r 92.3 0.13 4.6E-06 45.3 4.7 51 46-110 182-232 (367)
151 1fl2_A Alkyl hydroperoxide red 92.1 0.32 1.1E-05 41.0 6.8 58 48-111 57-114 (310)
152 2vou_A 2,6-dihydroxypyridine h 91.9 0.27 9.1E-06 43.5 6.3 49 60-117 110-159 (397)
153 3gyx_A Adenylylsulfate reducta 91.7 0.28 9.6E-06 47.0 6.6 61 48-110 167-231 (662)
154 2bry_A NEDD9 interacting prote 91.7 0.21 7E-06 46.1 5.5 62 48-112 167-230 (497)
155 2a87_A TRXR, TR, thioredoxin r 91.5 0.25 8.6E-06 42.4 5.5 54 52-111 195-251 (335)
156 3ab1_A Ferredoxin--NADP reduct 91.5 0.38 1.3E-05 41.6 6.7 56 48-111 75-130 (360)
157 3d1c_A Flavin-containing putat 91.5 0.42 1.4E-05 41.3 7.0 55 48-112 89-143 (369)
158 1kdg_A CDH, cellobiose dehydro 91.4 0.25 8.4E-06 46.0 5.7 56 52-112 200-261 (546)
159 4b1b_A TRXR, thioredoxin reduc 91.3 0.44 1.5E-05 44.5 7.3 56 46-110 262-317 (542)
160 3s5w_A L-ornithine 5-monooxyge 91.3 0.62 2.1E-05 41.9 8.1 46 60-111 329-376 (463)
161 4ap3_A Steroid monooxygenase; 91.2 0.33 1.1E-05 45.4 6.4 57 48-111 100-158 (549)
162 3cp8_A TRNA uridine 5-carboxym 91.2 0.31 1.1E-05 46.5 6.3 55 48-111 118-173 (641)
163 3gwf_A Cyclohexanone monooxyge 91.2 0.34 1.1E-05 45.2 6.4 57 48-111 88-146 (540)
164 3lzw_A Ferredoxin--NADP reduct 91.1 0.3 1E-05 41.4 5.6 55 47-110 67-121 (332)
165 3fbs_A Oxidoreductase; structu 91.1 0.3 1E-05 40.7 5.4 51 48-111 175-225 (297)
166 2e1m_B L-glutamate oxidase; L- 91.1 0.23 7.9E-06 37.5 4.2 52 96-149 3-56 (130)
167 3klj_A NAD(FAD)-dependent dehy 91.0 0.4 1.4E-05 42.6 6.5 51 49-110 64-114 (385)
168 3vrd_B FCCB subunit, flavocyto 91.0 0.068 2.3E-06 47.4 1.4 46 56-110 211-256 (401)
169 1hyu_A AHPF, alkyl hydroperoxi 90.9 0.53 1.8E-05 43.5 7.4 55 51-110 394-451 (521)
170 3rp8_A Flavoprotein monooxygen 90.7 0.3 1E-05 43.2 5.4 59 48-117 128-187 (407)
171 1lvl_A Dihydrolipoamide dehydr 90.7 0.33 1.1E-05 44.0 5.7 55 46-111 211-267 (458)
172 2xve_A Flavin-containing monoo 90.6 0.53 1.8E-05 42.8 7.1 60 48-111 102-165 (464)
173 3hyw_A Sulfide-quinone reducta 90.5 0.21 7E-06 45.0 4.2 53 48-110 201-254 (430)
174 2zbw_A Thioredoxin reductase; 90.5 0.47 1.6E-05 40.4 6.3 55 48-111 66-120 (335)
175 3pl8_A Pyranose 2-oxidase; sub 90.4 0.31 1.1E-05 46.3 5.4 50 60-112 273-324 (623)
176 3d1c_A Flavin-containing putat 90.3 0.39 1.3E-05 41.5 5.7 55 48-111 215-271 (369)
177 3kd9_A Coenzyme A disulfide re 90.3 0.49 1.7E-05 42.6 6.5 55 45-110 188-242 (449)
178 1hyu_A AHPF, alkyl hydroperoxi 89.5 0.66 2.3E-05 42.9 6.8 58 48-111 268-325 (521)
179 3sx6_A Sulfide-quinone reducta 89.4 0.55 1.9E-05 42.2 6.1 51 49-109 210-266 (437)
180 3ic9_A Dihydrolipoamide dehydr 89.1 1.5 5E-05 40.1 8.8 58 46-111 214-273 (492)
181 2xdo_A TETX2 protein; tetracyc 89.0 0.32 1.1E-05 43.0 4.1 58 50-118 131-189 (398)
182 2dkh_A 3-hydroxybenzoate hydro 89.0 0.71 2.4E-05 43.9 6.7 69 48-118 142-218 (639)
183 3c96_A Flavin-containing monoo 88.9 0.62 2.1E-05 41.3 6.0 63 48-117 108-175 (410)
184 3f8d_A Thioredoxin reductase ( 88.9 0.66 2.3E-05 38.9 5.9 54 48-111 71-124 (323)
185 2q0l_A TRXR, thioredoxin reduc 88.9 0.82 2.8E-05 38.4 6.5 54 48-111 60-113 (311)
186 2jbv_A Choline oxidase; alcoho 88.8 0.34 1.2E-05 45.2 4.4 49 59-111 221-272 (546)
187 3uox_A Otemo; baeyer-villiger 88.6 0.56 1.9E-05 43.8 5.6 57 48-111 88-146 (545)
188 2gv8_A Monooxygenase; FMO, FAD 88.3 0.65 2.2E-05 41.8 5.8 59 48-112 116-177 (447)
189 4fk1_A Putative thioredoxin re 88.2 0.59 2E-05 39.5 5.1 53 48-109 181-233 (304)
190 1ps9_A 2,4-dienoyl-COA reducta 87.5 1.3 4.5E-05 42.2 7.7 51 48-111 574-627 (671)
191 3itj_A Thioredoxin reductase 1 87.3 0.9 3.1E-05 38.4 5.8 57 48-111 85-141 (338)
192 3qfa_A Thioredoxin reductase 1 86.8 2.2 7.6E-05 39.2 8.5 62 46-111 249-314 (519)
193 1vdc_A NTR, NADPH dependent th 86.8 1.4 4.8E-05 37.4 6.7 53 48-111 71-123 (333)
194 1w4x_A Phenylacetone monooxyge 86.7 1.2 4E-05 41.3 6.6 57 49-112 96-154 (542)
195 2gag_A Heterotetrameric sarcos 86.4 1 3.4E-05 45.1 6.3 53 54-110 323-381 (965)
196 2q7v_A Thioredoxin reductase; 85.6 1.8 6.2E-05 36.6 6.8 55 48-111 66-122 (325)
197 3s5w_A L-ornithine 5-monooxyge 85.3 1.3 4.5E-05 39.7 6.0 57 48-110 128-190 (463)
198 2gjc_A Thiazole biosynthetic e 85.2 3.4 0.00012 35.9 8.4 65 48-112 147-239 (326)
199 1trb_A Thioredoxin reductase; 85.2 1.6 5.4E-05 36.7 6.2 54 47-111 62-115 (320)
200 3jsk_A Cypbp37 protein; octame 84.7 2.4 8.3E-05 37.2 7.3 65 48-112 161-251 (344)
201 2vdc_G Glutamate synthase [NAD 84.6 0.66 2.3E-05 42.2 3.7 51 54-110 309-376 (456)
202 2a87_A TRXR, TR, thioredoxin r 84.0 2.1 7E-05 36.5 6.5 53 48-111 72-125 (335)
203 1q1r_A Putidaredoxin reductase 83.8 1.5 5E-05 39.4 5.6 47 54-111 67-113 (431)
204 1lqt_A FPRA; NADP+ derivative, 83.2 1.1 3.6E-05 40.8 4.5 55 51-111 250-325 (456)
205 1cjc_A Protein (adrenodoxin re 83.1 2 6.8E-05 39.0 6.3 49 60-111 270-332 (460)
206 1gte_A Dihydropyrimidine dehyd 82.6 2.4 8.2E-05 42.6 7.1 55 51-110 374-440 (1025)
207 3qvp_A Glucose oxidase; oxidor 82.3 1.2 4.3E-05 41.9 4.7 50 58-110 238-291 (583)
208 3ef6_A Toluene 1,2-dioxygenase 81.6 1.7 5.8E-05 38.6 5.1 47 54-111 64-110 (410)
209 1xhc_A NADH oxidase /nitrite r 81.6 2 6.9E-05 37.6 5.6 47 52-110 65-111 (367)
210 2x8g_A Thioredoxin glutathione 81.6 3.4 0.00012 38.5 7.4 62 46-111 325-394 (598)
211 2r0c_A REBC; flavin adenine di 81.4 3 0.0001 38.6 6.9 61 49-118 140-203 (549)
212 3uox_A Otemo; baeyer-villiger 81.1 1.4 4.8E-05 41.0 4.5 50 51-114 342-393 (545)
213 4hb9_A Similarities with proba 81.1 1.6 5.6E-05 37.9 4.8 57 53-117 114-172 (412)
214 3cty_A Thioredoxin reductase; 79.6 4.2 0.00014 34.1 6.8 53 48-111 73-125 (319)
215 1o94_A Tmadh, trimethylamine d 78.9 3.1 0.00011 40.1 6.3 25 50-74 574-598 (729)
216 3fbs_A Oxidoreductase; structu 77.7 3.7 0.00013 33.8 5.7 54 48-111 57-111 (297)
217 3lxd_A FAD-dependent pyridine 77.2 2.7 9.3E-05 37.2 5.0 50 50-110 68-117 (415)
218 3hyw_A Sulfide-quinone reducta 77.1 0.64 2.2E-05 41.7 0.8 51 49-111 58-108 (430)
219 1ju2_A HydroxynitrIle lyase; f 75.3 1.6 5.5E-05 40.5 3.0 56 53-111 200-260 (536)
220 3gwf_A Cyclohexanone monooxyge 74.7 1.7 5.7E-05 40.4 3.0 44 57-113 340-385 (540)
221 4eqs_A Coenzyme A disulfide re 74.4 3.8 0.00013 36.7 5.2 52 54-111 64-115 (437)
222 1gpe_A Protein (glucose oxidas 73.4 2.8 9.4E-05 39.4 4.2 52 57-110 241-295 (587)
223 3oc4_A Oxidoreductase, pyridin 73.4 6.5 0.00022 35.2 6.5 50 53-110 64-113 (452)
224 3sx6_A Sulfide-quinone reducta 73.4 5.1 0.00017 35.7 5.8 52 49-112 61-112 (437)
225 3q9t_A Choline dehydrogenase a 73.3 3.4 0.00012 38.8 4.8 49 58-110 217-268 (577)
226 2gqw_A Ferredoxin reductase; f 72.9 2.8 9.7E-05 37.1 3.9 45 56-111 68-112 (408)
227 3fim_B ARYL-alcohol oxidase; A 72.4 2.7 9.4E-05 39.3 3.8 48 58-110 219-274 (566)
228 3t37_A Probable dehydrogenase; 71.3 3.7 0.00013 37.4 4.5 48 59-111 223-270 (526)
229 3l8k_A Dihydrolipoyl dehydroge 71.0 5.1 0.00017 36.1 5.2 55 48-111 215-271 (466)
230 4fk1_A Putative thioredoxin re 69.7 7.1 0.00024 32.6 5.6 55 48-110 61-115 (304)
231 3fg2_P Putative rubredoxin red 69.1 7.3 0.00025 34.2 5.7 49 50-110 60-108 (404)
232 3h8l_A NADH oxidase; membrane 68.8 5.4 0.00018 35.0 4.8 52 48-111 57-112 (409)
233 2cdu_A NADPH oxidase; flavoenz 68.8 8 0.00027 34.5 6.0 51 52-110 63-115 (452)
234 1nhp_A NADH peroxidase; oxidor 68.3 12 0.00042 33.2 7.2 53 51-111 60-114 (447)
235 2v3a_A Rubredoxin reductase; a 67.9 9.6 0.00033 33.1 6.3 47 53-111 66-112 (384)
236 1pn0_A Phenol 2-monooxygenase; 67.3 8.7 0.0003 36.5 6.2 30 48-77 120-152 (665)
237 3ics_A Coenzyme A-disulfide re 67.0 6.5 0.00022 36.5 5.2 54 49-110 95-150 (588)
238 3kd9_A Coenzyme A disulfide re 66.5 5.4 0.00018 35.6 4.4 43 57-110 69-112 (449)
239 4ap3_A Steroid monooxygenase; 64.9 4.1 0.00014 37.9 3.3 46 54-113 350-397 (549)
240 1m6i_A Programmed cell death p 64.6 4 0.00014 37.2 3.2 41 59-110 102-142 (493)
241 3cgb_A Pyridine nucleotide-dis 64.3 9.3 0.00032 34.5 5.6 51 53-111 98-151 (480)
242 3ntd_A FAD-dependent pyridine 64.0 6.4 0.00022 36.2 4.5 53 50-110 61-115 (565)
243 2e1m_A L-glutamate oxidase; L- 64.0 7.8 0.00027 34.3 4.9 34 41-78 315-348 (376)
244 2bc0_A NADH oxidase; flavoprot 62.6 8.3 0.00028 34.9 4.9 52 52-111 97-148 (490)
245 3r9u_A Thioredoxin reductase; 62.1 15 0.00051 30.3 6.1 55 47-110 62-116 (315)
246 4a5l_A Thioredoxin reductase; 61.3 56 0.0019 26.7 9.7 57 50-111 191-249 (314)
247 4b63_A L-ornithine N5 monooxyg 60.3 18 0.00061 32.9 6.7 62 48-110 146-212 (501)
248 3vrd_B FCCB subunit, flavocyto 60.1 13 0.00045 32.3 5.6 45 55-111 63-107 (401)
249 3iwa_A FAD-dependent pyridine 60.0 15 0.00052 32.8 6.2 46 57-110 76-123 (472)
250 1ebd_A E3BD, dihydrolipoamide 59.4 15 0.00052 32.7 6.0 49 50-110 94-143 (455)
251 4a5l_A Thioredoxin reductase; 55.9 14 0.00049 30.5 5.0 54 48-111 67-120 (314)
252 3h28_A Sulfide-quinone reducta 54.8 6.1 0.00021 35.0 2.5 51 49-111 58-108 (430)
253 3g3e_A D-amino-acid oxidase; F 54.6 2.9 0.0001 35.8 0.3 49 48-118 143-191 (351)
254 2a8x_A Dihydrolipoyl dehydroge 53.7 18 0.00061 32.3 5.5 49 51-111 95-145 (464)
255 1dxl_A Dihydrolipoamide dehydr 51.4 19 0.00066 32.1 5.3 49 51-111 100-150 (470)
256 4a9w_A Monooxygenase; baeyer-v 50.5 9.5 0.00032 32.0 3.0 39 59-111 246-284 (357)
257 1w4x_A Phenylacetone monooxyge 48.7 14 0.00047 34.0 3.9 47 52-112 343-391 (542)
258 1y56_A Hypothetical protein PH 47.8 20 0.00068 32.5 4.8 45 59-111 172-218 (493)
259 1v59_A Dihydrolipoamide dehydr 47.1 21 0.00072 31.9 4.8 49 52-112 101-157 (478)
260 1c0p_A D-amino acid oxidase; a 44.3 13 0.00045 31.7 2.9 43 48-112 143-185 (363)
261 2qae_A Lipoamide, dihydrolipoy 44.2 27 0.00091 31.2 5.0 48 51-110 97-146 (468)
262 1ojt_A Surface protein; redox- 43.3 28 0.00097 31.2 5.1 48 52-111 100-159 (482)
263 4gcm_A TRXR, thioredoxin reduc 38.6 63 0.0022 26.5 6.3 53 48-111 63-115 (312)
264 3l8k_A Dihydrolipoyl dehydroge 38.2 29 0.001 31.0 4.3 48 51-110 93-142 (466)
265 1xdi_A RV3303C-LPDA; reductase 38.2 32 0.0011 31.0 4.6 54 51-110 99-154 (499)
266 2hqm_A GR, grase, glutathione 34.8 33 0.0011 30.7 4.1 47 52-110 110-158 (479)
267 2wpf_A Trypanothione reductase 34.0 57 0.0019 29.4 5.6 48 52-110 112-165 (495)
268 1lvl_A Dihydrolipoamide dehydr 33.8 79 0.0027 28.0 6.5 43 53-110 102-144 (458)
269 2gag_A Heterotetrameric sarcos 33.4 67 0.0023 31.9 6.4 57 49-111 183-252 (965)
270 2eq6_A Pyruvate dehydrogenase 33.3 62 0.0021 28.8 5.7 43 53-110 99-141 (464)
271 2xve_A Flavin-containing monoo 31.1 32 0.0011 30.8 3.3 29 87-118 254-282 (464)
272 1zmd_A Dihydrolipoyl dehydroge 30.6 69 0.0024 28.4 5.5 48 52-111 102-151 (474)
273 2r9z_A Glutathione amide reduc 30.2 85 0.0029 27.9 6.0 44 52-110 97-140 (463)
274 1zk7_A HGII, reductase, mercur 29.4 58 0.002 28.9 4.8 44 55-110 102-148 (467)
275 1ghh_A DINI, DNA-damage-induci 27.7 1.3E+02 0.0045 20.3 5.1 40 201-240 3-44 (81)
276 1fec_A Trypanothione reductase 26.4 84 0.0029 28.2 5.3 48 52-110 108-161 (490)
277 1ges_A Glutathione reductase; 25.6 1.1E+02 0.0038 27.0 5.9 44 52-110 98-141 (450)
278 4b63_A L-ornithine N5 monooxyg 24.9 29 0.00099 31.5 1.9 17 95-111 392-408 (501)
279 2yqu_A 2-oxoglutarate dehydrog 24.2 76 0.0026 28.0 4.5 46 52-110 94-139 (455)
280 2gv8_A Monooxygenase; FMO, FAD 23.5 55 0.0019 28.8 3.4 22 87-111 269-291 (447)
281 2e1m_C L-glutamate oxidase; L- 23.0 16 0.00053 28.6 -0.3 46 198-246 36-88 (181)
282 3urh_A Dihydrolipoyl dehydroge 21.2 1.6E+02 0.0054 26.2 6.1 48 51-110 119-168 (491)
283 1mo9_A ORF3; nucleotide bindin 21.2 1.1E+02 0.0037 27.7 5.0 39 58-110 146-184 (523)
284 3dk9_A Grase, GR, glutathione 20.7 1.3E+02 0.0044 26.7 5.3 47 51-110 112-158 (478)
285 3c4a_A Probable tryptophan hyd 20.5 43 0.0015 28.7 2.0 50 48-117 99-148 (381)
286 3lad_A Dihydrolipoamide dehydr 20.4 88 0.003 27.7 4.1 48 51-110 103-152 (476)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.79 E-value=8.5e-18 Score=152.98 Aligned_cols=213 Identities=14% Similarity=0.163 Sum_probs=155.5
Q ss_pred chhHHhHhCCCCCccccHHHHHHHHHHHHhccCCceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCC
Q 025358 2 WDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANA 81 (254)
Q Consensus 2 w~pl~~a~l~~~~~~~SA~~~~~~l~~~~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g 81 (254)
|+|++...++.+++++|+..++..+..+.... ...++.|+.. .++++|.+.++++|++|++|++|++|..++ +
T Consensus 155 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~---~~~~~~gG~~-~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~ 227 (425)
T 3ka7_A 155 ADSFCGWALSLKSDEVPVEEVFEIIENMYRFG---GTGIPEGGCK-GIIDALETVISANGGKIHTGQEVSKILIEN---G 227 (425)
T ss_dssp HHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHC---SCEEETTSHH-HHHHHHHHHHHHTTCEEECSCCEEEEEEET---T
T ss_pred HHHHHHHHhCCCcccchHHHHHHHHHHHHhcC---CccccCCCHH-HHHHHHHHHHHHcCCEEEECCceeEEEEEC---C
Confidence 56777777889999999998888877643221 2457888875 699999999999999999999999999886 5
Q ss_pred cceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCccc---CchhHHHhhcCCCCcEEEEEEEecCccccchhhhHH
Q 025358 82 ETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWR---EMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERS 158 (254)
Q Consensus 82 ~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~---~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~ 158 (254)
++.+|.+ +|++++||.||+|+|++.+.+|+++... ...+.+++.++++.++++++|+++++..
T Consensus 228 --~~~gv~~----~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~-------- 293 (425)
T 3ka7_A 228 --KAAGIIA----DDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLV-------- 293 (425)
T ss_dssp --EEEEEEE----TTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSS--------
T ss_pred --EEEEEEE----CCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCcc--------
Confidence 6888876 5889999999999999998899975321 3456777888888888999999998653
Q ss_pred HHhhhccCCCceeecCCCC-ccceeccCCCCCcccccCCCceEEEEEeecCCCCCCCCHHHHHHHHHHHHc--CCCCCcc
Q 025358 159 RQLRRALGLDNLLYTPDAD-FSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKQVG--FSSISII 235 (254)
Q Consensus 159 ~~l~~~~~~~~~~~~~~~~-~~~~~~~s~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~eei~~~v~~~L~--~P~~~~~ 235 (254)
..+++++..+.. ...+...+.++| +++|+| ++++.++.....+..+. .++++++++++|+ +|+. .
T Consensus 294 -------~~~~~~~~~~~~~~~~~~~~s~~~p-~~ap~G-~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~p~~--~ 361 (425)
T 3ka7_A 294 -------GHTGVLLTPYTRRINGVNEVTQADP-ELAPPG-KHLTMCHQYVAPENVKN-LESEIEMGLEDLKEIFPGK--R 361 (425)
T ss_dssp -------CSSSEEECCSSSSEEEEECGGGTCG-GGSCTT-CEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHHSTTC--C
T ss_pred -------CcCEEEECCChhhcceEEeccCCCC-CcCCCC-CeEEEEEeccccccccc-hHHHHHHHHHHHHHhCCCC--c
Confidence 345666655543 222334466788 578888 56766655433222222 3456799999999 9983 3
Q ss_pred eeeeeeeEEeeeCce
Q 025358 236 PRFRSYLVVCCQNRA 250 (254)
Q Consensus 236 ~~~~~~~v~~~~~~a 250 (254)
.++. .|.+ ++.|
T Consensus 362 ~~~~--~v~~-~~~~ 373 (425)
T 3ka7_A 362 YEVL--LIQS-YHDE 373 (425)
T ss_dssp EEEE--EEEE-EBTT
T ss_pred eEEE--EEEE-ECCC
Confidence 4443 4555 4444
No 2
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.69 E-value=3.7e-16 Score=145.33 Aligned_cols=173 Identities=16% Similarity=0.198 Sum_probs=109.0
Q ss_pred eEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh-hHhhc
Q 025358 38 LRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP-GIKRL 116 (254)
Q Consensus 38 ~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~-~~~~L 116 (254)
..++.|+.+ .++++|++.++++||+|++|++|++|..++ + +++||++. ||+++.||+||+|++++ ++..|
T Consensus 213 ~~~p~GG~~-~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~---~--~~~gV~~~---~g~~~~ad~VV~~a~~~~~~~~L 283 (501)
T 4dgk_A 213 VWFPRGGTG-ALVQGMIKLFQDLGGEVVLNARVSHMETTG---N--KIEAVHLE---DGRRFLTQAVASNADVVHTYRDL 283 (501)
T ss_dssp EEEETTHHH-HHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEET---TSCEEECSCEEECCC--------
T ss_pred eEEeCCCCc-chHHHHHHHHHHhCCceeeecceeEEEeeC---C--eEEEEEec---CCcEEEcCEEEECCCHHHHHHHh
Confidence 347888886 699999999999999999999999999987 5 79999997 89999999999999976 56778
Q ss_pred CCCcccCchhHHHhhcCCCC-cEEEEEEEecCccccchhhhHHHHhhhccCCCceeecCC---------------CCccc
Q 025358 117 LPSSWREMKFFNNIYALVGV-PVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPD---------------ADFSC 180 (254)
Q Consensus 117 l~~~~~~~~~~~~~~~l~~~-~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---------------~~~~~ 180 (254)
+++......+.+++.+.+.. +..++++.++++..++ .++++.|..+ ..+++
T Consensus 284 l~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l-------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (501)
T 4dgk_A 284 LSQHPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQL-------------AHHTVCFGPRYRELIDEIFNHDGLAEDFSL 350 (501)
T ss_dssp -------------------CCEEEEEEEEESSCCTTS-------------CSEEEEEECC-------------CCCEEEE
T ss_pred ccccccchhhhhhhhccccCCceeEEEecccCCcccc-------------ccceeccccchhhhccccccccccccCCce
Confidence 88765444445566666644 6788899999866421 1223333221 12345
Q ss_pred eecc-CCCCCcccccCCCceEEEEEeecCCCCCC----CCHHHHHHHHHHHHc---CCCCC
Q 025358 181 FADL-ALTSPEDYYREGQGSLLQCVLTPGDPYMP----LPNDEIIRRVAKQVG---FSSIS 233 (254)
Q Consensus 181 ~~~~-s~~~p~~~~~~g~~~~~~~~~~~~~~~~~----~~~eei~~~v~~~L~---~P~~~ 233 (254)
|.+. +.+|| +++|+|+.++..++..+...+.+ ..+|++.+++++.|+ +|+++
T Consensus 351 ~v~~~s~~dp-~~ap~G~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~vl~~l~~~~~P~~~ 410 (501)
T 4dgk_A 351 YLHAPCVTDS-SLAPEGCGSYYVLAPVPHLGTANLDWTVEGPKLRDRIFAYLEQHYMPGLR 410 (501)
T ss_dssp EEECGGGTCG-GGSSTTCEEEEEEEEECCTTTSCCCHHHHHHHHHHHHHHHHHHHTCTTHH
T ss_pred ecccCCCCCC-CcCCCCCceEEEEEecCccccccccHHHHHHHHHHHHHHHHHHhhCCChH
Confidence 6655 46788 58999865554444445433322 236788999999997 59983
No 3
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.68 E-value=3.8e-15 Score=135.72 Aligned_cols=193 Identities=12% Similarity=0.132 Sum_probs=142.5
Q ss_pred chhHHhHhCCCCCccccHHHHHHHHHHHHhccCCceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCC
Q 025358 2 WDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANA 81 (254)
Q Consensus 2 w~pl~~a~l~~~~~~~SA~~~~~~l~~~~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g 81 (254)
++|++....+.+++++|+..++..+..+.... ...++.|+.. .++++|.+.++++|++|++|++|++|..++ +
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~gG~~-~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~ 220 (421)
T 3nrn_A 148 LESFAGWADSVSLSDLTALELAKEIRAALRWG---GPGLIRGGCK-AVIDELERIIMENKGKILTRKEVVEINIEE---K 220 (421)
T ss_dssp HHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHC---SCEEETTCHH-HHHHHHHHHHHTTTCEEESSCCEEEEETTT---T
T ss_pred HHHHHHHhcCCCcccCCHHHHHHHHHHHhhcC---CcceecCCHH-HHHHHHHHHHHHCCCEEEcCCeEEEEEEEC---C
Confidence 56777777889999999998888777643221 2467888875 699999999999999999999999999876 4
Q ss_pred cceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCCCCcEEEEEEEecCccccchhhhHHHHh
Q 025358 82 ETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQL 161 (254)
Q Consensus 82 ~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l 161 (254)
++ | .. +|+++.||.||+|++++.+.+|++.......+.+.+.++++.+++.+++.++++..
T Consensus 221 --~v--V-~~---~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~----------- 281 (421)
T 3nrn_A 221 --KV--Y-TR---DNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPR----------- 281 (421)
T ss_dssp --EE--E-ET---TCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCS-----------
T ss_pred --EE--E-Ee---CCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcc-----------
Confidence 44 4 33 78899999999999999988999743223346677888988899999999998642
Q ss_pred hhccCCCceeecCCCCccceeccCCCCCcccccCCCceEEEEEeecCCCCCCCCHHHHHHHHHHHHc--CC
Q 025358 162 RRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKQVG--FS 230 (254)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~eei~~~v~~~L~--~P 230 (254)
..+++++.++..+..+...+.++| +.+|+| ++++.+...-. ..+.++.++.++++|+ +|
T Consensus 282 ----~~~~~~~~~~~~~~~i~~~s~~~p-~~ap~G-~~~~~~~~~~~----~~~~~~~~~~~~~~L~~~~p 342 (421)
T 3nrn_A 282 ----IGNTIVFTPGLMINGFNEPSALDK-SLAREG-YTLIMAHMALK----NGNVKKAIEKGWEELLEIFP 342 (421)
T ss_dssp ----SCSSEEECTTSSSCEEECGGGTCG-GGSCTT-EEEEEEEEECT----TCCHHHHHHHHHHHHHHHCT
T ss_pred ----cCCeEEEcCCcceeeEeccCCCCC-CcCCCC-ceEEEEEEeec----cccHHHHHHHHHHHHHHHcC
Confidence 346777776654222333356677 477877 56655544321 1234566899999999 89
No 4
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.57 E-value=9.4e-14 Score=128.13 Aligned_cols=219 Identities=15% Similarity=0.132 Sum_probs=148.0
Q ss_pred CchhHHhHhCCCCCccccHHHHHHHHHHHHhc---------------------------cCCceeEEeCCCCcchhHHHH
Q 025358 1 MWDPVAYALGFIDCDNISARCMLTIFALFATK---------------------------TEASLLRMLKGSPDVYLSGPI 53 (254)
Q Consensus 1 ~w~pl~~a~l~~~~~~~SA~~~~~~l~~~~~~---------------------------~~~~~~g~~~g~~~~~l~~~l 53 (254)
+|+|++.+..+.+++++|+.+++..+...... .....+.++.|+++ .++++|
T Consensus 162 ~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l 240 (477)
T 3nks_A 162 AMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLE-MLPQAL 240 (477)
T ss_dssp THHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTT-HHHHHH
T ss_pred HHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHH-HHHHHH
Confidence 57899999999999999999976654432110 11224567888886 699999
Q ss_pred HHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcC
Q 025358 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYAL 133 (254)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l 133 (254)
.+.+++.|++|++|++|++|..+++ +++.|.+ +|+++.||+||+|+|++.+.+|+++.. ....+.+.++
T Consensus 241 ~~~l~~~g~~i~~~~~V~~i~~~~~-----~~~~v~~----~~~~~~ad~vv~a~p~~~~~~ll~~~~--~~~~~~l~~~ 309 (477)
T 3nks_A 241 ETHLTSRGVSVLRGQPVCGLSLQAE-----GRWKVSL----RDSSLEADHVISAIPASVLSELLPAEA--APLARALSAI 309 (477)
T ss_dssp HHHHHHTTCEEECSCCCCEEEECGG-----GCEEEEC----SSCEEEESEEEECSCHHHHHHHSCGGG--HHHHHHHHTC
T ss_pred HHHHHhcCCEEEeCCEEEEEEEcCC-----ceEEEEE----CCeEEEcCEEEECCCHHHHHHhccccC--HHHHHHHhcC
Confidence 9999999999999999999998762 3345543 566899999999999999999998632 2355677888
Q ss_pred CCCcEEEEEEEecCccccchhhhHHHHhhhccCCCceeecCCCCc----cceeccCCCCCcccc-cCCCceEEEEEeecC
Q 025358 134 VGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADF----SCFADLALTSPEDYY-REGQGSLLQCVLTPG 208 (254)
Q Consensus 134 ~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~s~~~p~~~~-~~g~~~~~~~~~~~~ 208 (254)
.+.++.++++.|+++.-+ . ....++....... .+|... ..| ... +++ .+++.+++...
T Consensus 310 ~~~~~~~v~l~~~~~~~~---------~----~~~g~l~~~~~~~~~~~~~~~s~--~~~-~~~~~~~-~~~l~~~~gg~ 372 (477)
T 3nks_A 310 TAVSVAVVNLQYQGAHLP---------V----QGFGHLVPSSEDPGVLGIVYDSV--AFP-EQDGSPP-GLRVTVMLGGS 372 (477)
T ss_dssp CEEEEEEEEEEETTCCCS---------S----CSSEEECCTTTCSSEEEEECHHH--HCG-GGSTTTT-CEEEEEEECHH
T ss_pred CCCcEEEEEEEECCCCCC---------C----CCceEEccCCCCCCceEEEEecc--ccC-CCCCCCC-ceEEEEEECCc
Confidence 888999999999986420 0 0012232222111 112111 112 111 223 46777776532
Q ss_pred ------CCCCCCCHHHHHHHHHHHHc--CCCCCcceeeeeeeEEeeeCceee
Q 025358 209 ------DPYMPLPNDEIIRRVAKQVG--FSSISIIPRFRSYLVVCCQNRAIF 252 (254)
Q Consensus 209 ------~~~~~~~~eei~~~v~~~L~--~P~~~~~~~~~~~~v~~~~~~a~~ 252 (254)
+....+++|++++.++++|+ ++ +. .....+.|.| +++|+.
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g-~~--~~~~~~~v~r-w~~a~p 420 (477)
T 3nks_A 373 WLQTLEASGCVLSQELFQQRAQEAAATQLG-LK--EMPSHCLVHL-HKNCIP 420 (477)
T ss_dssp HHHHHHHSSCCCCHHHHHHHHHHHHHHHHC-CC--SCCSEEEEEE-EEEEEE
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHHhC-CC--CCCcEEEEEE-cCCccC
Confidence 12235799999999999998 53 32 3456778888 777764
No 5
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.55 E-value=5.4e-14 Score=130.67 Aligned_cols=224 Identities=11% Similarity=0.126 Sum_probs=145.2
Q ss_pred CchhHHhHhCCCCCccccHHHHHH---------HHHH-HHhcc------CCceeEEeCCCCcchhHHHHHHHHHhCCcEE
Q 025358 1 MWDPVAYALGFIDCDNISARCMLT---------IFAL-FATKT------EASLLRMLKGSPDVYLSGPIRKYITDKGGRF 64 (254)
Q Consensus 1 ~w~pl~~a~l~~~~~~~SA~~~~~---------~l~~-~~~~~------~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i 64 (254)
+++|+.......++++.|+.++.. .+.. +.... .+.....++|+++ .++++|++.|++.|++|
T Consensus 161 ~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l~~~g~~i 239 (513)
T 4gde_A 161 FMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTG-GIWIAVANTLPKEKTRF 239 (513)
T ss_dssp THHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHH-HHHHHHHHTSCGGGEEE
T ss_pred hcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHH-HHHHHHHHHHHhcCeee
Confidence 467887777888888888876432 1121 11111 1112333477875 68999999999999999
Q ss_pred EcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCCCCcEEEEEEE
Q 025358 65 HLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLR 144 (254)
Q Consensus 65 ~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~ 144 (254)
++|++|++|..++ + .+++. +|+++.||+||+|+|++.+.+++++. ........+++.++.+|+|.
T Consensus 240 ~~~~~V~~I~~~~---~-----~v~~~---~G~~~~ad~vI~t~P~~~l~~~l~~~----~~~~~~~~l~y~~~~~v~l~ 304 (513)
T 4gde_A 240 GEKGKVTKVNANN---K-----TVTLQ---DGTTIGYKKLVSTMAVDFLAEAMNDQ----ELVGLTKQLFYSSTHVIGVG 304 (513)
T ss_dssp SGGGCEEEEETTT---T-----EEEET---TSCEEEEEEEEECSCHHHHHHHTTCH----HHHHHHTTCCEEEEEEEEEE
T ss_pred ecceEEEEEEccC---C-----EEEEc---CCCEEECCEEEECCCHHHHHHhcCch----hhHhhhhcccCCceEEEEEE
Confidence 9999999999876 3 24565 89999999999999999999998753 23345568888899999999
Q ss_pred ecCccccchhhhHHHHhhhccCCCceeecCCCCccce--eccCCCCCcccccCCCc--------------------e-EE
Q 025358 145 YNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCF--ADLALTSPEDYYREGQG--------------------S-LL 201 (254)
Q Consensus 145 ~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~s~~~p~~~~~~g~~--------------------~-~~ 201 (254)
++.+..+ .. ...+|++.+++...+. ...+.-+| ...|.+.. . +.
T Consensus 305 ~~~~~~~--------~~----~~~~~~y~~~~~~~f~Ri~~~~n~sp-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (513)
T 4gde_A 305 VRGSRPE--------RI----GDKCWLYFPEDNCPFYRATIFSNYSP-YNQPEASAALPTMQLADGSRPQSTEAKEGPYW 371 (513)
T ss_dssp EESSCCT--------TT----TTCCEEECCSTTCSCSEEECGGGTCG-GGSCCTTCCEECCEETTSCCCSCCSEECCCEE
T ss_pred Eeccccc--------cc----cccceeeccCCCCceeEEEecCCCCc-ccCCCCCceEEEEEeccCCCcccccCCcceEE
Confidence 8864320 00 1234444444332211 01111111 01111111 1 22
Q ss_pred EEEee-cCCCCCCCCHHHHHHHHHHHHc-CCCCCcceeeeeeeEEeeeCceeecC
Q 025358 202 QCVLT-PGDPYMPLPNDEIIRRVAKQVG-FSSISIIPRFRSYLVVCCQNRAIFVP 254 (254)
Q Consensus 202 ~~~~~-~~~~~~~~~~eei~~~v~~~L~-~P~~~~~~~~~~~~v~~~~~~a~~~~ 254 (254)
..+.. ..++...+++|+|++.++++|. .-.+....++.++.|+| +++|-.++
T Consensus 372 ~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r-~~~ayP~y 425 (513)
T 4gde_A 372 SIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRR-FDHGYPTP 425 (513)
T ss_dssp EEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEE-EEEEEECC
T ss_pred EEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEE-CCCeeccc
Confidence 22222 2356678999999999999999 43445678899999999 88886553
No 6
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.54 E-value=1.8e-13 Score=127.58 Aligned_cols=223 Identities=12% Similarity=0.091 Sum_probs=149.6
Q ss_pred CchhHHhHhCCCCCccccHHHH---------HHHHHHHHhccC------CceeEEeC-CCCcchhHHHHHHHHHhCCcEE
Q 025358 1 MWDPVAYALGFIDCDNISARCM---------LTIFALFATKTE------ASLLRMLK-GSPDVYLSGPIRKYITDKGGRF 64 (254)
Q Consensus 1 ~w~pl~~a~l~~~~~~~SA~~~---------~~~l~~~~~~~~------~~~~g~~~-g~~~~~l~~~l~~~l~~~Gg~i 64 (254)
|++|++......+++++|+.++ ..+++.+..... ...+.|+. |+++ .++++|++.+.+. +|
T Consensus 155 ~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~-~l~~~la~~l~~~--~i 231 (484)
T 4dsg_A 155 FMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTG-IIYQAIKEKLPSE--KL 231 (484)
T ss_dssp CCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTH-HHHHHHHHHSCGG--GE
T ss_pred HHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHH-HHHHHHHhhhhhC--eE
Confidence 6789998999999999998762 233333222211 22466664 7885 5899999888653 89
Q ss_pred EcC--ceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCc--ccCchhHHHhhcCCCCcEEE
Q 025358 65 HLR--WGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSS--WREMKFFNNIYALVGVPVVT 140 (254)
Q Consensus 65 ~~~--~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~--~~~~~~~~~~~~l~~~~i~~ 140 (254)
+++ ++|++|..++ + +|++. +|+++.||+||+|+|++.+.+|+++. ..+....+.+.++++.++..
T Consensus 232 ~~~~~~~V~~I~~~~---~-----~v~~~---~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~ 300 (484)
T 4dsg_A 232 TFNSGFQAIAIDADA---K-----TITFS---NGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNV 300 (484)
T ss_dssp EECGGGCEEEEETTT---T-----EEEET---TSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEE
T ss_pred EECCCceeEEEEecC---C-----EEEEC---CCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEE
Confidence 999 5699999875 3 34554 78889999999999999988887541 11223445677899999999
Q ss_pred EEEEecCccccchhhhHHHHhhhccCCCceeecCCCCccc--eeccCCCCCcccccCCCceEEEEEeecCCCCCCCCHHH
Q 025358 141 VQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSC--FADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDE 218 (254)
Q Consensus 141 v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~s~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~ee 218 (254)
|++.|+++..+ ++ ...++++.++....+ ....+..+| ..+|+| ++++.+.++.+ +.+.+++|+
T Consensus 301 v~l~~~~~~~~--------~~----~~~~~i~vp~~~~~~~ri~~~s~~~p-~~ap~g-~~~l~~e~~~~-~~~~~~d~~ 365 (484)
T 4dsg_A 301 IGIGVKGTPPP--------HL----KTACWLYFPEDTSPFYRATVFSNYSK-YNVPEG-HWSLMLEVSES-KYKPVNHST 365 (484)
T ss_dssp EEEEEESCCCG--------GG----TTCCEEECCSTTCSCSEEECGGGTCG-GGSCTT-EEEEEEEEEEB-TTBCCCTTS
T ss_pred EEEEEcCCCcc--------cC----CCCeEEEEEcCCCeEEEEEeecCCCc-ccCCCC-eEEEEEEEecC-cCCcCCHHH
Confidence 99999986420 11 234555555543222 222333446 356666 55555555544 455789999
Q ss_pred HHHHHHHHHc-CCCCCcceeeeeeeEEeeeCceeec
Q 025358 219 IIRRVAKQVG-FSSISIIPRFRSYLVVCCQNRAIFV 253 (254)
Q Consensus 219 i~~~v~~~L~-~P~~~~~~~~~~~~v~~~~~~a~~~ 253 (254)
|++.++++|. ...++....+....|+| +++|-.+
T Consensus 366 l~~~a~~~L~~~~~~~~~~~~~~~~v~r-~~~~yP~ 400 (484)
T 4dsg_A 366 LIEDCIVGCLASNLLLPEDLLVSKWHYR-IEKGYPT 400 (484)
T ss_dssp HHHHHHHHHHHTTSCCTTCCEEEEEEEE-EEEEEEC
T ss_pred HHHHHHHHHHHcCCCCccceEEEEEEEE-eCccccC
Confidence 9999999999 76664444566667888 6676554
No 7
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.52 E-value=1.8e-13 Score=125.58 Aligned_cols=219 Identities=14% Similarity=0.146 Sum_probs=144.0
Q ss_pred CchhHHhHhCCCCCccccHHHHHHHHHHHHhc----------------------cCCceeEEeCCCCcchhHHHHHHHHH
Q 025358 1 MWDPVAYALGFIDCDNISARCMLTIFALFATK----------------------TEASLLRMLKGSPDVYLSGPIRKYIT 58 (254)
Q Consensus 1 ~w~pl~~a~l~~~~~~~SA~~~~~~l~~~~~~----------------------~~~~~~g~~~g~~~~~l~~~l~~~l~ 58 (254)
+|+|++.+....+++++|+...+..+..+... .....+..+.++++ .+.+.|.+.++
T Consensus 168 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~l~~~l~~~l~ 246 (470)
T 3i6d_A 168 LIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQ-TLVEEIEKQLK 246 (470)
T ss_dssp THHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEETTCTH-HHHHHHHHTCC
T ss_pred hccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHH-HHHHHHHHhcC
Confidence 57899999999999999998766543211100 00224556777875 57788877765
Q ss_pred hCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCCCCcE
Q 025358 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPV 138 (254)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i 138 (254)
+ ++|++|++|++|..+++ + +.|.+. +|+++.||+||+|+|++.+.+|+++. +..+.+.++.+.++
T Consensus 247 ~--~~i~~~~~V~~i~~~~~--~----~~v~~~---~g~~~~ad~vi~a~p~~~~~~l~~~~----~~~~~~~~~~~~~~ 311 (470)
T 3i6d_A 247 L--TKVYKGTKVTKLSHSGS--C----YSLELD---NGVTLDADSVIVTAPHKAAAGMLSEL----PAISHLKNMHSTSV 311 (470)
T ss_dssp S--EEEECSCCEEEEEECSS--S----EEEEES---SSCEEEESEEEECSCHHHHHHHTTTS----TTHHHHHTCEEEEE
T ss_pred C--CEEEeCCceEEEEEcCC--e----EEEEEC---CCCEEECCEEEECCCHHHHHHHcCCc----hhhHHHhcCCCCce
Confidence 5 89999999999998763 3 346664 78889999999999999999998753 23466778888899
Q ss_pred EEEEEEecCccccchhhhHHHHhhhccCCCceeecCCCCccceecc--CCCCCcccccCCCceEEEEEeecC--CCCCCC
Q 025358 139 VTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADL--ALTSPEDYYREGQGSLLQCVLTPG--DPYMPL 214 (254)
Q Consensus 139 ~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--s~~~p~~~~~~g~~~~~~~~~~~~--~~~~~~ 214 (254)
..+++.|+++.-+. .. ....++...+....++... +...+ ...|++ ..++.+++... +.+..+
T Consensus 312 ~~v~l~~~~~~~~~-------~~----~~~g~l~~~~~~~~~~~~~~~s~~~~-~~~p~~-~~~l~~~~~~~~~~~~~~~ 378 (470)
T 3i6d_A 312 ANVALGFPEGSVQM-------EH----EGTGFVISRNSDFAITACTWTNKKWP-HAAPEG-KTLLRAYVGKAGDESIVDL 378 (470)
T ss_dssp EEEEEEESSTTCCC-------SS----CSSEEEECSTTCCSEEEEEEHHHHCG-GGSCTT-CEEEEEEECCSSCCGGGTS
T ss_pred EEEEEEECchhcCC-------CC----CCeEEEccCCCCCCceEEEEEcCcCC-CcCCCC-CEEEEEEECCCCCccccCC
Confidence 99999999865210 00 1113343333322221111 11112 234444 46666666422 345688
Q ss_pred CHHHHHHHHHHHHc--CCCCCcceeeeeeeEEeeeCceee
Q 025358 215 PNDEIIRRVAKQVG--FSSISIIPRFRSYLVVCCQNRAIF 252 (254)
Q Consensus 215 ~~eei~~~v~~~L~--~P~~~~~~~~~~~~v~~~~~~a~~ 252 (254)
+++++++.++++|+ +|.. +....+.+.+ +++|.+
T Consensus 379 ~~~~~~~~~~~~l~~~~g~~---~~p~~~~~~~-w~~a~p 414 (470)
T 3i6d_A 379 SDNDIINIVLEDLKKVMNIN---GEPEMTCVTR-WHESMP 414 (470)
T ss_dssp CHHHHHHHHHHHHGGGSCCC---SCCSEEEEEE-EEEEEE
T ss_pred CHHHHHHHHHHHHHHHhCCC---CCceEEEEEE-cCCccC
Confidence 99999999999999 6653 3566777888 677653
No 8
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.46 E-value=4.4e-13 Score=123.76 Aligned_cols=213 Identities=12% Similarity=0.111 Sum_probs=143.3
Q ss_pred CchhHHhHhCCCCCccccHHHHHHHHHHHHh-----------cc--------------CCceeEEeCCCCcchhHHHHHH
Q 025358 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT-----------KT--------------EASLLRMLKGSPDVYLSGPIRK 55 (254)
Q Consensus 1 ~w~pl~~a~l~~~~~~~SA~~~~~~l~~~~~-----------~~--------------~~~~~g~~~g~~~~~l~~~l~~ 55 (254)
||+|++.+..+.+++++|+.+++..+..+.. .. .+..+.++.|+++ .+++.|.+
T Consensus 166 ~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~l~~~l~~ 244 (475)
T 3lov_A 166 LIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLE-SLIERLEE 244 (475)
T ss_dssp THHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCHH-HHHHHHHH
T ss_pred HHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHH-HHHHHHHh
Confidence 6899999999999999998865554432110 01 1234677888886 47888888
Q ss_pred HHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCCC
Q 025358 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVG 135 (254)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~ 135 (254)
.+.+ ++|++|++|++|..++ + + +.|++. +| ++.||+||+|+|++.+.+|+++.. . +.+.++++
T Consensus 245 ~l~~--~~i~~~~~V~~i~~~~---~--~-~~v~~~---~g-~~~ad~vV~a~p~~~~~~ll~~~~----~-~~~~~~~~ 307 (475)
T 3lov_A 245 VLER--SEIRLETPLLAISRED---G--R-YRLKTD---HG-PEYADYVLLTIPHPQVVQLLPDAH----L-PELEQLTT 307 (475)
T ss_dssp HCSS--CEEESSCCCCEEEEET---T--E-EEEECT---TC-CEEESEEEECSCHHHHHHHCTTSC----C-HHHHTCCE
T ss_pred hccC--CEEEcCCeeeEEEEeC---C--E-EEEEEC---CC-eEECCEEEECCCHHHHHHHcCccC----H-HHHhcCCC
Confidence 7765 8999999999999876 3 2 235443 67 799999999999999999987632 1 56778888
Q ss_pred CcEEEEEEEecCccccchhhhHHHHhhhccCCC--ceeecCCCCccceecc--CCCCCcccccCCCceEEEEEeecC--C
Q 025358 136 VPVVTVQLRYNGWVTELQDLERSRQLRRALGLD--NLLYTPDADFSCFADL--ALTSPEDYYREGQGSLLQCVLTPG--D 209 (254)
Q Consensus 136 ~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~--s~~~p~~~~~~g~~~~~~~~~~~~--~ 209 (254)
.++.++++.|+++.. . +.+ .++..++....++... +...+ ...|+ ..++.+++... +
T Consensus 308 ~~~~~v~l~~~~~~~-~-------------~~~g~g~l~~~~~~~~~~~~~~~s~~~~-~~~p~--~~~l~~~~~~~~~~ 370 (475)
T 3lov_A 308 HSTATVTMIFDQQQS-L-------------PIEGTGFVVNRRAPYSITACTAIDQKWN-HSAPD--HTVLRAFVGRPGND 370 (475)
T ss_dssp EEEEEEEEEEECCSS-C-------------SSSSSEEEECTTSSCSEEEEEEHHHHCT-TTCTT--EEEEEEEECBTTBC
T ss_pred CeEEEEEEEECCcCC-C-------------CCCCEEEEecCCCCCceEEEEEEcccCC-CCCCC--cEEEEEEeCCCCCC
Confidence 899999999998651 1 112 2444434332221111 11112 11222 45666666422 3
Q ss_pred CCCCCCHHHHHHHHHHHHc--CCCCCcceeeeeeeEEeeeCceee
Q 025358 210 PYMPLPNDEIIRRVAKQVG--FSSISIIPRFRSYLVVCCQNRAIF 252 (254)
Q Consensus 210 ~~~~~~~eei~~~v~~~L~--~P~~~~~~~~~~~~v~~~~~~a~~ 252 (254)
.+..+++|++++.++++|+ ++.- .....+.|.+ +++|++
T Consensus 371 ~~~~~~~e~~~~~~~~~L~~~~g~~---~~p~~~~v~~-w~~a~p 411 (475)
T 3lov_A 371 HLVHESDEVLQQAVLQDLEKICGRT---LEPKQVIISR-LMDGLP 411 (475)
T ss_dssp GGGGSCHHHHHHHHHHHHHHHHSSC---CCCSEEEEEE-EEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHHHhCCC---CCCeEEEEEE-cccCCC
Confidence 5667899999999999999 6642 3556777888 777754
No 9
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.45 E-value=9.5e-13 Score=123.22 Aligned_cols=217 Identities=12% Similarity=0.020 Sum_probs=137.9
Q ss_pred chhHHhHhCCCCCccccHHHHHHHHHHH------HhccCCceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEe
Q 025358 2 WDPVAYALGFIDCDNISARCMLTIFALF------ATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILY 75 (254)
Q Consensus 2 w~pl~~a~l~~~~~~~SA~~~~~~l~~~------~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~ 75 (254)
|+|++....+.+++++|+.+++..++.. .....+....++.|+.+ .+++.|.+.+ |++|++|++|++|..
T Consensus 165 ~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l---g~~i~~~~~V~~i~~ 240 (520)
T 1s3e_A 165 ATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSG-QVSERIMDLL---GDRVKLERPVIYIDQ 240 (520)
T ss_dssp HHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTH-HHHHHHHHHH---GGGEESSCCEEEEEC
T ss_pred HHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHH-HHHHHHHHHc---CCcEEcCCeeEEEEE
Confidence 5677777788999999999987665431 11112334566788885 5888888765 889999999999998
Q ss_pred ccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCCCCcEEEEEEEecCccccchhh
Q 025358 76 DKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDL 155 (254)
Q Consensus 76 ~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~ 155 (254)
++ + ++. |.+. +|+.+.||+||+|+|+..+.+|+.+...+....+.+.++.+.++..+++.|+++.-+
T Consensus 241 ~~---~--~v~-v~~~---~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~---- 307 (520)
T 1s3e_A 241 TR---E--NVL-VETL---NHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWR---- 307 (520)
T ss_dssp SS---S--SEE-EEET---TSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGG----
T ss_pred CC---C--eEE-EEEC---CCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCccc----
Confidence 76 3 344 6664 788999999999999999888752211222334566778877899999999986410
Q ss_pred hHHHHhhhccCCCceeecCCCCccceeccCCCCCcccccCCCceEEEEEeec--CCCCCCCCHHHHHHHHHHHHc--CCC
Q 025358 156 ERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTP--GDPYMPLPNDEIIRRVAKQVG--FSS 231 (254)
Q Consensus 156 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~~~~~g~~~~~~~~~~~--~~~~~~~~~eei~~~v~~~L~--~P~ 231 (254)
. . .....++..+...+++.... + . .++++..++..++.. ++.|..+++|++++.++++|+ ||.
T Consensus 308 ~----~----~~~g~~~~~~~~~~~~~~~d---~-~-~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~ 374 (520)
T 1s3e_A 308 K----K----DYCGTMIIDGEEAPVAYTLD---D-T-KPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGS 374 (520)
T ss_dssp G----G----TEEEEEEECSTTCSCSEEEE---C-C-CTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTC
T ss_pred C----C----CCCceeeccCCCCceEEEee---C-C-CCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCc
Confidence 0 0 11122221111111111111 1 1 122222455455432 256778899999999999998 775
Q ss_pred CCcceeeeeeeEEeeeCce
Q 025358 232 ISIIPRFRSYLVVCCQNRA 250 (254)
Q Consensus 232 ~~~~~~~~~~~v~~~~~~a 250 (254)
- ......++.+.+ +.+.
T Consensus 375 ~-~~~~p~~~~~~~-W~~~ 391 (520)
T 1s3e_A 375 L-EALEPVHYEEKN-WCEE 391 (520)
T ss_dssp G-GGGCCSEEEEEE-GGGC
T ss_pred c-ccCCccEEEEEe-eCCC
Confidence 2 234566777777 4433
No 10
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.44 E-value=3.9e-12 Score=117.37 Aligned_cols=217 Identities=13% Similarity=0.139 Sum_probs=140.5
Q ss_pred CchhHHhHhCCCCCccccHHHHHHHHHHHHh----------------------ccCC----ceeEEeCCCCcchhHHHHH
Q 025358 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT----------------------KTEA----SLLRMLKGSPDVYLSGPIR 54 (254)
Q Consensus 1 ~w~pl~~a~l~~~~~~~SA~~~~~~l~~~~~----------------------~~~~----~~~g~~~g~~~~~l~~~l~ 54 (254)
+|+|++....+.+++++|+.+++..+..+.. ...+ ....++.|+.+ .+++.|.
T Consensus 167 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~ 245 (478)
T 2ivd_A 167 LLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQ-VLIDALA 245 (478)
T ss_dssp THHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTH-HHHHHHH
T ss_pred HHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHH-HHHHHHH
Confidence 4678888888899999999876655433211 1112 45677888886 5888888
Q ss_pred HHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCC
Q 025358 55 KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALV 134 (254)
Q Consensus 55 ~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~ 134 (254)
+.+ |++|++|++|++|..++ + + +.|++.+..+|+++.||+||+|+|+..+.+|+|+. .....+.+.+++
T Consensus 246 ~~l---g~~i~~~~~V~~i~~~~---~--~-~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l--~~~~~~~l~~~~ 314 (478)
T 2ivd_A 246 ASL---GDAAHVGARVEGLARED---G--G-WRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPL--DDALAALVAGIA 314 (478)
T ss_dssp HHH---GGGEESSEEEEEEECC-------C-CEEEEEETTEEEEEECSEEEECSCHHHHHHHHTTT--CHHHHHHHHTCC
T ss_pred HHh---hhhEEcCCEEEEEEecC---C--e-EEEEEeecCCCceEEcCEEEECCCHHHHHHHhhcc--CHHHHHHHhcCC
Confidence 887 78999999999999876 3 2 45665211267789999999999999988888752 223456677888
Q ss_pred CCcEEEEEEEecCccccchhhhHHHHhhhccCCCc--eeecCC---CCccceeccCCCCCcccccCCCceEEEEEeecC-
Q 025358 135 GVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDN--LLYTPD---ADFSCFADLALTSPEDYYREGQGSLLQCVLTPG- 208 (254)
Q Consensus 135 ~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~---~~~~~~~~~s~~~p~~~~~~g~~~~~~~~~~~~- 208 (254)
+.++..++|.++++.-+ ..+. +++... +...++.. +...| ...|+| ..++.+++...
T Consensus 315 ~~~~~~v~l~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~-s~~~~-~~~p~g-~~~l~~~~~~~~ 377 (478)
T 2ivd_A 315 YAPIAVVHLGFDAGTLP--------------APDGFGFLVPAEEQRRMLGAIHA-STTFP-FRAEGG-RVLYSCMVGGAR 377 (478)
T ss_dssp BCCEEEEEEEECTTSSC--------------CCCSSEEECCGGGCCSCCEEEEH-HHHCG-GGBSTT-CEEEEEEEECTT
T ss_pred CCcEEEEEEEEccccCC--------------CCCceEEEecCCCCCceEEEEEE-cccCC-CcCCCC-CEEEEEEeCCcC
Confidence 88999999999986421 0011 121110 11111111 11123 233444 45666665533
Q ss_pred -CCCCCCCHHHHHHHHHHHHc--CCCCCcceeeeeeeEEeeeCce
Q 025358 209 -DPYMPLPNDEIIRRVAKQVG--FSSISIIPRFRSYLVVCCQNRA 250 (254)
Q Consensus 209 -~~~~~~~~eei~~~v~~~L~--~P~~~~~~~~~~~~v~~~~~~a 250 (254)
+.+..++++++.+.++++|+ +|.. . .+..+.+.+ +.++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-~--~p~~~~~~~-w~~~ 418 (478)
T 2ivd_A 378 QPGLVEQDEDALAALAREELKALAGVT-A--RPSFTRVFR-WPLG 418 (478)
T ss_dssp CGGGGGSCHHHHHHHHHHHHHHHHCCC-S--CCSEEEEEE-ESSC
T ss_pred CccccCCCHHHHHHHHHHHHHHHhCCC-C--CCcEEEEEE-CCCc
Confidence 34567889999999999999 7764 2 455666666 5555
No 11
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.30 E-value=3.1e-11 Score=111.96 Aligned_cols=208 Identities=12% Similarity=0.068 Sum_probs=132.4
Q ss_pred CchhHHhHhCCCCCccccHHHHHHHHHHHHhc----cCCceeEEeCCCCcchhHHHHHHHHHhCC-cEEEcCceeeEEEe
Q 025358 1 MWDPVAYALGFIDCDNISARCMLTIFALFATK----TEASLLRMLKGSPDVYLSGPIRKYITDKG-GRFHLRWGCREILY 75 (254)
Q Consensus 1 ~w~pl~~a~l~~~~~~~SA~~~~~~l~~~~~~----~~~~~~g~~~g~~~~~l~~~l~~~l~~~G-g~i~~~~~V~~i~~ 75 (254)
+|+|++....+.++++.|+..++..+...... ........+.|+.+ .+++.|.+.+++.| ++|++|++|++|..
T Consensus 206 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l~~~g~~~i~~~~~V~~i~~ 284 (495)
T 2vvm_A 206 SLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQS-AFARRFWEEAAGTGRLGYVFGCPVRSVVN 284 (495)
T ss_dssp HHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHH-HHHHHHHHHHHTTTCEEEESSCCEEEEEE
T ss_pred HHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHH-HHHHHHHHHhhhcCceEEEeCCEEEEEEE
Confidence 46788888888999999999877655421110 00112334677775 58999999999999 99999999999998
Q ss_pred ccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCCCCcEEEEEEEecCccccchhh
Q 025358 76 DKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDL 155 (254)
Q Consensus 76 ~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~ 155 (254)
+++ + +.|.+. +|+.+.||+||+|+|+..+.+++-....+....+.+..+.+.++..|+|.|+++.-.
T Consensus 285 ~~~--~----v~v~~~---~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~~---- 351 (495)
T 2vvm_A 285 ERD--A----ARVTAR---DGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKVHAEVDNKDMR---- 351 (495)
T ss_dssp CSS--S----EEEEET---TCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGGGG----
T ss_pred cCC--E----EEEEEC---CCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEEEEEECCccCC----
Confidence 762 3 345554 777899999999999999888741111122234566778888999999999985410
Q ss_pred hHHHHhhhccCCCceeecCCCCccceeccCCCCCcccccCCCceEEEEEeecCCCCCCCCHHHHHHHHHHHHc--CCCCC
Q 025358 156 ERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKQVG--FSSIS 233 (254)
Q Consensus 156 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~eei~~~v~~~L~--~P~~~ 233 (254)
....+.....+...++.+. ..|++ ..++..++..+.. +++++..+.++++|+ +|+.
T Consensus 352 ----------~~~g~~~~~~~~~~~~~~~-------~~~~~-~~vl~~~~~~~~~---~~~~e~~~~~~~~L~~~~~~~- 409 (495)
T 2vvm_A 352 ----------SWTGIAYPFNKLCYAIGDG-------TTPAG-NTHLVCFGNSANH---IQPDEDVRETLKAVGQLAPGT- 409 (495)
T ss_dssp ----------GEEEEECSSCSSCEEEEEE-------ECTTS-CEEEEEEECSTTC---CCTTTCHHHHHHHHHTTSTTS-
T ss_pred ----------CceeEecCCCCcEEEecCC-------CCCCC-CeEEEEEeCcccc---CCCHHHHHHHHHHHHHhcCCC-
Confidence 0111111212222222111 12233 3455555433222 456667788889998 6763
Q ss_pred cceeeeeeeEEee
Q 025358 234 IIPRFRSYLVVCC 246 (254)
Q Consensus 234 ~~~~~~~~~v~~~ 246 (254)
..+.++.+.+|
T Consensus 410 --~~~~~~~~~~W 420 (495)
T 2vvm_A 410 --FGVKRLVFHNW 420 (495)
T ss_dssp --CCEEEEEECCT
T ss_pred --CCceEEEEeEc
Confidence 45667766663
No 12
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.28 E-value=2.1e-11 Score=113.31 Aligned_cols=221 Identities=13% Similarity=0.049 Sum_probs=134.1
Q ss_pred CchhHHhHhCCCCCccccHHHHHHHHHHHHh---------------cc---------------CCceeEEeCCCCcchhH
Q 025358 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT---------------KT---------------EASLLRMLKGSPDVYLS 50 (254)
Q Consensus 1 ~w~pl~~a~l~~~~~~~SA~~~~~~l~~~~~---------------~~---------------~~~~~g~~~g~~~~~l~ 50 (254)
||+|++....+.+++++|+.+++..+..+.+ .. ....+.++.|+++ .|+
T Consensus 168 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~-~l~ 246 (504)
T 1sez_A 168 LIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQ-TLT 246 (504)
T ss_dssp THHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTH-HHH
T ss_pred HHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHH-HHH
Confidence 5789988888899999999875433222110 00 0112566788885 578
Q ss_pred HHHHHHHHhCC-cEEEcCceeeEEEeccCCCCcce----EEEEEEeecCCC---eEEEcCEEEEcCChhhHhhcCCC---
Q 025358 51 GPIRKYITDKG-GRFHLRWGCREILYDKAANAETY----VKGLAMSKATDK---KVVQADAYVAACDVPGIKRLLPS--- 119 (254)
Q Consensus 51 ~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~g~~~----v~gv~l~~~~~g---~~~~aD~VV~a~p~~~~~~Ll~~--- 119 (254)
++|++.+ | ++|++|++|++|..+++ + . .+.|++.+ .+| +.+.||+||+|+|++.+.+|+++
T Consensus 247 ~~l~~~l---~~~~i~~~~~V~~I~~~~~--~--~~~~~~~~v~~~~-~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~ 318 (504)
T 1sez_A 247 DAICKDL---REDELRLNSRVLELSCSCT--E--DSAIDSWSIISAS-PHKRQSEEESFDAVIMTAPLCDVKSMKIAKRG 318 (504)
T ss_dssp HHHHTTS---CTTTEETTCCEEEEEEECS--S--SSSSCEEEEEEBC-SSSSCBCCCEESEEEECSCHHHHHTSEEESSS
T ss_pred HHHHhhc---ccceEEcCCeEEEEEecCC--C--CcccceEEEEEcC-CCCccceeEECCEEEECCCHHHHHHHhhcccC
Confidence 8887654 5 79999999999998763 2 1 25566641 245 57899999999999999998731
Q ss_pred cccCchhHHHhhcCCCCcEEEEEEEecCccccchhhhHHHHhhhccCCCceeecCCCC---ccceecc--CCCCCccccc
Q 025358 120 SWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDAD---FSCFADL--ALTSPEDYYR 194 (254)
Q Consensus 120 ~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~--s~~~p~~~~~ 194 (254)
..... ..+.++++.++..|+|.|+++.-+. .+ ...++++..... ...+... +...| +.+|
T Consensus 319 ~~~~~---~~l~~~~~~~~~~v~l~~~~~~~~~-------~~----~~~~~l~~~~~~~~g~~~~~~~~~s~~~~-~~~p 383 (504)
T 1sez_A 319 NPFLL---NFIPEVDYVPLSVVITTFKRENVKY-------PL----EGFGVLVPSKEQQHGLKTLGTLFSSMMFP-DRAP 383 (504)
T ss_dssp SBCCC---TTSCCCCEEEEEEEEEEEEGGGBSS-------CC----CSSEEECCGGGGGGTCCSSEEEEHHHHCG-GGSC
T ss_pred CcccH---HHHhcCCCCceEEEEEEEchhhcCC-------CC----CceEEEcCCCCCCCCCccceEEeeccccC-CcCC
Confidence 11111 1255666678999999998754100 00 011222211110 0111100 11223 2345
Q ss_pred CCCceEEEEEeecC--CCCCCCCHHHHHHHHHHHHc--CCCCCcceeeeeeeEEeeeCce
Q 025358 195 EGQGSLLQCVLTPG--DPYMPLPNDEIIRRVAKQVG--FSSISIIPRFRSYLVVCCQNRA 250 (254)
Q Consensus 195 ~g~~~~~~~~~~~~--~~~~~~~~eei~~~v~~~L~--~P~~~~~~~~~~~~v~~~~~~a 250 (254)
+| ..++.+++... ..|..+++|++++.++++|+ +|.- .....+.+.+ ++++
T Consensus 384 ~g-~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~---~~p~~~~~~~-w~~~ 438 (504)
T 1sez_A 384 NN-VYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAE---GEPTYVNHLY-WSKA 438 (504)
T ss_dssp TT-EEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBC---SCCSSEEEEE-EEEE
T ss_pred CC-CEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCC---CCCeEEEEeE-CCCC
Confidence 55 45666665432 35678899999999999999 6642 2456677777 4555
No 13
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.25 E-value=1.8e-11 Score=112.10 Aligned_cols=209 Identities=13% Similarity=0.034 Sum_probs=128.0
Q ss_pred chhHHhHhCCCCCc-cccHHHHHHHHHHHHh-----ccCCceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEe
Q 025358 2 WDPVAYALGFIDCD-NISARCMLTIFALFAT-----KTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILY 75 (254)
Q Consensus 2 w~pl~~a~l~~~~~-~~SA~~~~~~l~~~~~-----~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~ 75 (254)
|+|++....+.+++ +.|+..++..+..... ...+....++.|+.+ .+++.|.+.+ |++|++|++|++|..
T Consensus 165 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l---g~~i~~~~~V~~i~~ 240 (453)
T 2yg5_A 165 IGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQ-QVSIRMAEAL---GDDVFLNAPVRTVKW 240 (453)
T ss_dssp HHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTH-HHHHHHHHHH---GGGEECSCCEEEEEE
T ss_pred HHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCChH-HHHHHHHHhc---CCcEEcCCceEEEEE
Confidence 45665566777888 9999987765543210 001122456788885 5888887765 899999999999998
Q ss_pred ccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCCCCcEEEEEEEecCccccchhh
Q 025358 76 DKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDL 155 (254)
Q Consensus 76 ~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~ 155 (254)
++ + +.+.|.+ +|+++.||+||+|+|+..+.+|+.....+....+.+.++...++..+++.|+++.-+
T Consensus 241 ~~---~--~~v~v~~----~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~---- 307 (453)
T 2yg5_A 241 NE---S--GATVLAD----GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWR---- 307 (453)
T ss_dssp ET---T--EEEEEET----TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGG----
T ss_pred eC---C--ceEEEEE----CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCC----
Confidence 76 3 3122432 678899999999999999888763211222234556677767888999999986410
Q ss_pred hHHHHhhhccCCCceeecCCC-CccceeccCCCCCcccccCCCceEEEEEeec--CCCCCCCCHHHHHHHHHHHHc--CC
Q 025358 156 ERSRQLRRALGLDNLLYTPDA-DFSCFADLALTSPEDYYREGQGSLLQCVLTP--GDPYMPLPNDEIIRRVAKQVG--FS 230 (254)
Q Consensus 156 ~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~s~~~p~~~~~~g~~~~~~~~~~~--~~~~~~~~~eei~~~v~~~L~--~P 230 (254)
. . .....++..+. ...+|.. + .++++..++..++.. ++.|..+++|++.+.++++|+ +|
T Consensus 308 ~----~----~~~g~~~~~~~~~~~~~~~-~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~ 371 (453)
T 2yg5_A 308 E----D----GLSGTGFGASEVVQEVYDN-T-------NHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLG 371 (453)
T ss_dssp G----G----TEEEEEECTTSSSCEEEEC-C-------CTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred C----C----CCCceeecCCCCeEEEEeC-C-------CCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhC
Confidence 0 0 11122222222 1112211 1 222323455555432 245667889999999999998 66
Q ss_pred CCCcceeeeeeeEEe
Q 025358 231 SISIIPRFRSYLVVC 245 (254)
Q Consensus 231 ~~~~~~~~~~~~v~~ 245 (254)
. ......++.+.+
T Consensus 372 ~--~~~~p~~~~~~~ 384 (453)
T 2yg5_A 372 P--KAEEPVVYYESD 384 (453)
T ss_dssp G--GGGCCSEEEECC
T ss_pred c--cCCCccEEEEee
Confidence 4 223445555555
No 14
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.19 E-value=3.7e-10 Score=99.78 Aligned_cols=179 Identities=13% Similarity=0.001 Sum_probs=113.7
Q ss_pred CCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcc
Q 025358 42 KGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSW 121 (254)
Q Consensus 42 ~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~ 121 (254)
.+++. .+.+.+.+.+ |++|+++++|++|..+++ + + .|.+. +|+.+.||.||+|+|++.+.+||++..
T Consensus 108 ~~g~~-~l~~~l~~~~---g~~i~~~~~V~~i~~~~~--~---~-~v~~~---~g~~~~ad~vV~A~p~~~~~~ll~~~~ 174 (342)
T 3qj4_A 108 PQGIS-SIIKHYLKES---GAEVYFRHRVTQINLRDD--K---W-EVSKQ---TGSPEQFDLIVLTMPVPEILQLQGDIT 174 (342)
T ss_dssp TTCTT-HHHHHHHHHH---TCEEESSCCEEEEEECSS--S---E-EEEES---SSCCEEESEEEECSCHHHHTTCBSTHH
T ss_pred CCCHH-HHHHHHHHhc---CCEEEeCCEEEEEEEcCC--E---E-EEEEC---CCCEEEcCEEEECCCHHHHHHHhcccc
Confidence 33443 4666666654 999999999999998762 3 3 35554 677789999999999999999987521
Q ss_pred --cCchhHHHhhcCCCCcEEEEEEEecCccccchhhhHHHHhhhccCCCceeecCCC-CccceeccCCCCCcccccCCCc
Q 025358 122 --REMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDA-DFSCFADLALTSPEDYYREGQG 198 (254)
Q Consensus 122 --~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~s~~~p~~~~~~g~~ 198 (254)
.+....+.+.++++.++.+|+|.|+++.. +. .+...++...++ ..+++.+.+..++ ..+++ +
T Consensus 175 ~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~----------~~--~~~~g~~~~~~~~~~~~~~~~~k~~r--~~~~~-~ 239 (342)
T 3qj4_A 175 TLISECQRQQLEAVSYSSRYALGLFYEAGTK----------ID--VPWAGQYITSNPCIRFVSIDNKKRNI--ESSEI-G 239 (342)
T ss_dssp HHSCHHHHHHHHTCCBCCEEEEEEECSSCC------------C--CSCSEEECSSCSSEEEEEEHHHHTTC--CCC-C-C
T ss_pred cccCHHHHHHHhcCCccccEEEEEEECCCCc----------cC--CceeeEEccCCcceEEEEccccCCCC--CCCCC-C
Confidence 12234567889999999999999997421 00 022333333333 2223222221110 00111 2
Q ss_pred eEEEEEeecC--CCCCCCCHHHHHHHHHHHHc--CCCCCcceeeeeeeEEeeeCceee
Q 025358 199 SLLQCVLTPG--DPYMPLPNDEIIRRVAKQVG--FSSISIIPRFRSYLVVCCQNRAIF 252 (254)
Q Consensus 199 ~~~~~~~~~~--~~~~~~~~eei~~~v~~~L~--~P~~~~~~~~~~~~v~~~~~~a~~ 252 (254)
..+.+..+.. +.+.++++|++++.++++|. ++.. ++...++|.| +++|.+
T Consensus 240 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~---~~p~~~~v~r-W~~a~p 293 (342)
T 3qj4_A 240 PSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPGL---PQPIATKCQK-WRHSQV 293 (342)
T ss_dssp CEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHHHSCSC---CCCSEEEEEE-ETTCSB
T ss_pred ceEEEECCHHHHHHhhcCCHHHHHHHHHHHHHHhccCC---CCCceeeecc-cccccc
Confidence 2444443332 35778999999999999999 7743 3557777888 777754
No 15
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.12 E-value=1.4e-10 Score=107.11 Aligned_cols=177 Identities=14% Similarity=0.130 Sum_probs=111.5
Q ss_pred eCCCCcchhHHHHHHHHHhC--------CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 41 LKGSPDVYLSGPIRKYITDK--------GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 41 ~~g~~~~~l~~~l~~~l~~~--------Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
..|+++ .+++.|.+.+.+. |++|++|++|++|..++ + ++. |++. +|+++.||+||+|+|+..
T Consensus 201 ~~gG~~-~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~---~--~v~-v~~~---~g~~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 201 DQRGYE-AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP---G--GVT-VKTE---DNSVYSADYVMVSASLGV 270 (472)
T ss_dssp CTTCTT-HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS---S--CEE-EEET---TSCEEEESEEEECSCHHH
T ss_pred cCCcHH-HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcC---C--cEE-EEEC---CCCEEEcCEEEEecCHHH
Confidence 467775 5889999888765 78999999999999876 3 343 6664 788899999999999998
Q ss_pred HhhcCCC--cccCchhHHHhhcCCCCcEEEEEEEecCccccchhhhHHHHhhhccCCCceeecCCC--CccceeccCCCC
Q 025358 113 IKRLLPS--SWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDA--DFSCFADLALTS 188 (254)
Q Consensus 113 ~~~Ll~~--~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~s~~~ 188 (254)
+.+++.. ...+....+.+.++...++..|+|.|+++.-+.. . ....+++.... ...++... +
T Consensus 271 l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~-------~----~~~~~~~~~~~~~~~~~~~~~---~ 336 (472)
T 1b37_A 271 LQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEG-------K----GREFFLYASSRRGYYGVWQEF---E 336 (472)
T ss_dssp HHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCS-------T----TCSEEEECCSSTTSSCEEEEC---T
T ss_pred hccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCC-------C----CcceEEecccCCccceeeecc---c
Confidence 8875421 1112223456677776788899999998642100 0 01112222111 11222211 1
Q ss_pred CcccccCCCceEEEEEeecC--CCCCCCCHHHHHHHHHHHHc--CCCCCcceeeeeeeEEee
Q 025358 189 PEDYYREGQGSLLQCVLTPG--DPYMPLPNDEIIRRVAKQVG--FSSISIIPRFRSYLVVCC 246 (254)
Q Consensus 189 p~~~~~~g~~~~~~~~~~~~--~~~~~~~~eei~~~v~~~L~--~P~~~~~~~~~~~~v~~~ 246 (254)
+ .+| + ++++.+++... ..|..++++++++.++++|+ +|+. ......++.+.+|
T Consensus 337 ~--~~p-~-~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~-~~~~~~~~~~~~W 393 (472)
T 1b37_A 337 K--QYP-D-ANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGK-DVPDATDILVPRW 393 (472)
T ss_dssp T--TST-T-CCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTS-CCCCCSEEECCCT
T ss_pred C--CCC-C-CCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCC-CCCCCceEEeccc
Confidence 2 122 2 23444444422 34667799999999999999 8986 3334456655553
No 16
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.04 E-value=1e-09 Score=101.58 Aligned_cols=181 Identities=10% Similarity=0.023 Sum_probs=113.5
Q ss_pred eeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC---eEEEcCEEEEcCChhhH
Q 025358 37 LLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK---KVVQADAYVAACDVPGI 113 (254)
Q Consensus 37 ~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g---~~~~aD~VV~a~p~~~~ 113 (254)
.+..+.|+.+ .|++.|++.+.+ ++|++|++|++|..++ + ++. |.+. +| +++.||+||+|+|+..+
T Consensus 230 ~~~~~~gG~~-~l~~~l~~~l~~--~~i~~~~~V~~i~~~~---~--~v~-v~~~---~g~~~~~~~ad~vI~a~p~~~l 297 (489)
T 2jae_A 230 MMFTPVGGMD-RIYYAFQDRIGT--DNIVFGAEVTSMKNVS---E--GVT-VEYT---AGGSKKSITADYAICTIPPHLV 297 (489)
T ss_dssp SEEEETTCTT-HHHHHHHHHHCG--GGEETTCEEEEEEEET---T--EEE-EEEE---ETTEEEEEEESEEEECSCHHHH
T ss_pred cEEeecCCHH-HHHHHHHHhcCC--CeEEECCEEEEEEEcC---C--eEE-EEEe---cCCeEEEEECCEEEECCCHHHH
Confidence 4566788875 589999988754 7899999999999876 3 343 5554 44 67899999999999998
Q ss_pred hhcCCCcccCchhHHHhhcCCCCcEEEEEEEecCccccchhhhHHHHhhhccCCCceeecCCCCccceeccCCCCCcccc
Q 025358 114 KRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYY 193 (254)
Q Consensus 114 ~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~~~ 193 (254)
.+|+.+ .+....+.+.++.+.++..|+|.|+++.- .. +. . ....+.....+...++.. +.. .
T Consensus 298 ~~l~~~--l~~~~~~~l~~~~~~~~~kv~l~~~~~~w----~~---~~-~--~~g~~~~~~~~~~~~~~~-s~~-----~ 359 (489)
T 2jae_A 298 GRLQNN--LPGDVLTALKAAKPSSSGKLGIEYSRRWW----ET---ED-R--IYGGASNTDKDISQIMFP-YDH-----Y 359 (489)
T ss_dssp TTSEEC--CCHHHHHHHHTEECCCEEEEEEEESSCHH----HH---TT-C--CCSCEEEESSTTCEEECC-SSS-----T
T ss_pred HhCccC--CCHHHHHHHHhCCCccceEEEEEeCCCCc----cC---CC-C--cccccccCCCCceEEEeC-CCC-----C
Confidence 887642 22234456778888899999999998541 00 00 0 011222222222212111 111 1
Q ss_pred cCCCceEEEEEeecC--CCCCCCCHHHHHHHHHHHHc--CCC-CCcceeeeeeeEEeeeCce
Q 025358 194 REGQGSLLQCVLTPG--DPYMPLPNDEIIRRVAKQVG--FSS-ISIIPRFRSYLVVCCQNRA 250 (254)
Q Consensus 194 ~~g~~~~~~~~~~~~--~~~~~~~~eei~~~v~~~L~--~P~-~~~~~~~~~~~v~~~~~~a 250 (254)
+.+.+.++..++... ..|..+++|++++.++++|+ +|. + ...+..+.+.+ +.+.
T Consensus 360 ~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~--~~~~~~~~~~~-W~~~ 418 (489)
T 2jae_A 360 NSDRGVVVAYYSSGKRQEAFESLTHRQRLAKAIAEGSEIHGEKY--TRDISSSFSGS-WRRT 418 (489)
T ss_dssp TSSCEEEEEEEEETHHHHHHHTSCHHHHHHHHHHHHHHHHCGGG--GSSEEEEEEEE-GGGS
T ss_pred CCCCCEEEEEeeCCchhhhhhcCCHHHHHHHHHHHHHHHcCcch--hhhccccEEEE-cCCC
Confidence 111234554444322 35667899999999999999 886 4 23455566666 4433
No 17
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.91 E-value=2.2e-09 Score=99.72 Aligned_cols=91 Identities=16% Similarity=0.153 Sum_probs=72.0
Q ss_pred CCccccHHHHHHHHHHHH---hccCCceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEE
Q 025358 13 DCDNISARCMLTIFALFA---TKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLA 89 (254)
Q Consensus 13 ~~~~~SA~~~~~~l~~~~---~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~ 89 (254)
.+.+.||...+..++.|. ...+++.++|+.|+++ .++++|.+.+++.||+|+++++|++|..+++ | +++||+
T Consensus 220 ~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG~~-~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~--g--~v~gV~ 294 (475)
T 3p1w_A 220 DYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYGLG-GIPEGFSRMCAINGGTFMLNKNVVDFVFDDD--N--KVCGIK 294 (475)
T ss_dssp GGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCTT-HHHHHHHHHHHHC--CEESSCCEEEEEECTT--S--CEEEEE
T ss_pred CcccCCHHHHHHHHHHHHHHHhhcCCCceEEECCCHH-HHHHHHHHHHHHcCCEEEeCCeEEEEEEecC--C--eEEEEE
Confidence 345568888777666544 2234678999999986 5899999999999999999999999999332 6 789999
Q ss_pred EeecCCCeEEEcCEEEEcCChh
Q 025358 90 MSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 90 l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
+. +|+++.||+||+|.+..
T Consensus 295 ~~---~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 295 SS---DGEIAYCDKVICDPSYV 313 (475)
T ss_dssp ET---TSCEEEEEEEEECGGGC
T ss_pred EC---CCcEEECCEEEECCCcc
Confidence 86 78899999999998754
No 18
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.65 E-value=4.9e-07 Score=83.64 Aligned_cols=159 Identities=11% Similarity=0.038 Sum_probs=101.2
Q ss_pred eeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe----EEEcCEEEEcCChhh
Q 025358 37 LLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK----VVQADAYVAACDVPG 112 (254)
Q Consensus 37 ~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~----~~~aD~VV~a~p~~~ 112 (254)
.+..+.|+.+ .++++|.+.+.+ +|++|++|++|..++ + ++ .|.+. +|+ ++.||+||+|+|+..
T Consensus 232 ~~~~~~gG~~-~l~~~l~~~l~~---~i~~~~~V~~I~~~~---~--~v-~v~~~---~~~~~~~~~~ad~vI~t~p~~~ 298 (498)
T 2iid_A 232 RFDEIVDGMD-KLPTAMYRDIQD---KVHFNAQVIKIQQND---Q--KV-TVVYE---TLSKETPSVTADYVIVCTTSRA 298 (498)
T ss_dssp CEEEETTCTT-HHHHHHHHHTGG---GEESSCEEEEEEECS---S--CE-EEEEE---CSSSCCCEEEESEEEECSCHHH
T ss_pred ceEEeCCcHH-HHHHHHHHhccc---ccccCCEEEEEEECC---C--eE-EEEEe---cCCcccceEEeCEEEECCChHH
Confidence 3456778875 689999888765 899999999999876 3 33 46554 443 579999999999988
Q ss_pred HhhcC--CCcccCchhHHHhhcCCCCcEEEEEEEecCccccchhhhHHHHhhhccCCCceeecCCCCccceeccCCCCCc
Q 025358 113 IKRLL--PSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPE 190 (254)
Q Consensus 113 ~~~Ll--~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~p~ 190 (254)
+.++. |+ .+....+.+.++.+.++..|+|.|+++.-+ . .. ....+.+...+...++.. +.
T Consensus 299 ~~~i~f~p~--Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~----~--~~-----~~~~~~~~~~~~~~~~~~-s~---- 360 (498)
T 2iid_A 299 VRLIKFNPP--LLPKKAHALRSVHYRSGTKIFLTCTTKFWE----D--DG-----IHGGKSTTDLPSRFIYYP-NH---- 360 (498)
T ss_dssp HTTSEEESC--CCHHHHHHHHHCCEECEEEEEEEESSCGGG----G--GT-----CCSSEEEESSTTCEEECC-SS----
T ss_pred HhheecCCC--CCHHHHHHHHhCCCcceeEEEEEeCCCCcc----C--CC-----ccCCcccCCCCcceEEEC-CC----
Confidence 87753 33 222344567788888899999999986410 0 00 011222222222112110 11
Q ss_pred ccccCCCceEEEEEeec--CCCCCCCCHHHHHHHHHHHHc
Q 025358 191 DYYREGQGSLLQCVLTP--GDPYMPLPNDEIIRRVAKQVG 228 (254)
Q Consensus 191 ~~~~~g~~~~~~~~~~~--~~~~~~~~~eei~~~v~~~L~ 228 (254)
..|+| ..++..++.. +..|..+++|++.+.++++|+
T Consensus 361 -~~p~g-~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~ 398 (498)
T 2iid_A 361 -NFTNG-VGVIIAYGIGDDANFFQALDFKDCADIVFNDLS 398 (498)
T ss_dssp -CCTTS-CEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHH
T ss_pred -CCCCC-CcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHH
Confidence 12344 3444445432 246778899999999999998
No 19
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.65 E-value=3.6e-07 Score=83.67 Aligned_cols=90 Identities=12% Similarity=0.101 Sum_probs=67.4
Q ss_pred CCccccHHHHHHHHHHHHhc---cCCceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEE
Q 025358 13 DCDNISARCMLTIFALFATK---TEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLA 89 (254)
Q Consensus 13 ~~~~~SA~~~~~~l~~~~~~---~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~ 89 (254)
.+.+.++...+..+..+... .+.+.+.++.|+.+ .++++|.+.+++.|++|++|++|++|..++ + ++.+|.
T Consensus 198 ~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG~~-~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~---~--~v~~v~ 271 (433)
T 1d5t_A 198 DYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLG-ELPQGFARLSAIYGGTYMLNKPVDDIIMEN---G--KVVGVK 271 (433)
T ss_dssp GGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTCTT-HHHHHHHHHHHHHTCCCBCSCCCCEEEEET---T--EEEEEE
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcCHH-HHHHHHHHHHHHcCCEEECCCEEEEEEEeC---C--EEEEEE
Confidence 34555665433333333321 22345778998875 699999999999999999999999999876 5 687776
Q ss_pred EeecCCCeEEEcCEEEEcCChhh
Q 025358 90 MSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 90 l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
. +|+++.||+||+|+++..
T Consensus 272 ~----~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 272 S----EGEVARCKQLICDPSYVP 290 (433)
T ss_dssp E----TTEEEECSEEEECGGGCG
T ss_pred E----CCeEEECCEEEECCCCCc
Confidence 4 788999999999999764
No 20
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.59 E-value=5.2e-06 Score=79.59 Aligned_cols=113 Identities=12% Similarity=0.025 Sum_probs=78.2
Q ss_pred ccHHHHHHHHHHHHh---ccCCceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeec
Q 025358 17 ISARCMLTIFALFAT---KTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA 93 (254)
Q Consensus 17 ~SA~~~~~~l~~~~~---~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~ 93 (254)
.++...+..+..++. ..+.+.+.|+.||.+ .|.++|.+.++..||+|++|++|++|.++++ +| +++||++.
T Consensus 346 ~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g-~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~-~g--~v~gV~~~-- 419 (650)
T 1vg0_A 346 SCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQG-ELPQCFCRMCAVFGGIYCLRHSVQCLVVDKE-SR--KCKAVIDQ-- 419 (650)
T ss_dssp CBHHHHHHHHHHHHHHTTSSSSSSEEEETTCTT-HHHHHHHHHHHHTTCEEESSCCEEEEEEETT-TC--CEEEEEET--
T ss_pred CchhHHHHHHHHHHHHHHhhccCceEEeCCchh-HHHHHHHHHHHHcCCEEEeCCEeeEEEEeCC-CC--eEEEEEeC--
Confidence 466665544454432 233357889999987 5999999999999999999999999999751 14 78998865
Q ss_pred CCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCCCCcEEEEEEEecCccc
Q 025358 94 TDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (254)
Q Consensus 94 ~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~ 150 (254)
+|+.+.||+||++. .. +|.... .++....+.-+.+.+++++.
T Consensus 420 -~Ge~i~A~~VVs~~--~~----lp~~~~--------~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 420 -FGQRIISKHFIIED--SY----LSENTC--------SRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp -TSCEEECSEEEEEG--GG----BCTTTT--------TTCCCEEEEEEEEEESSCSS
T ss_pred -CCCEEEcCEEEECh--hh----cCHhHh--------ccccccceEEEEEEecCCCC
Confidence 79999999999942 22 332111 01122245666777888764
No 21
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.45 E-value=5.9e-07 Score=88.12 Aligned_cols=165 Identities=16% Similarity=0.200 Sum_probs=98.4
Q ss_pred HHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhh----cCCCcccCchhHH
Q 025358 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKR----LLPSSWREMKFFN 128 (254)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~----Ll~~~~~~~~~~~ 128 (254)
+.+.+. .|++|++|++|++|..+++ + + .|++. +|+++.||+||+|+|+..+++ +.|.. +....+
T Consensus 536 l~~aLa-~gl~I~l~t~V~~I~~~~~--~---v-~V~~~---~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~L--p~~~~~ 603 (776)
T 4gut_A 536 IIEKLA-EGLDIQLKSPVQCIDYSGD--E---V-QVTTT---DGTGYSAQKVLVTVPLALLQKGAIQFNPPL--SEKKMK 603 (776)
T ss_dssp HHHHHH-TTSCEESSCCEEEEECSSS--S---E-EEEET---TCCEEEESEEEECCCHHHHHTTCSEEESCC--CHHHHH
T ss_pred HHHHHH-hCCcEEcCCeeEEEEEcCC--E---E-EEEEC---CCcEEEcCEEEECCCHHHHhhcccccCCCC--CHHHHH
Confidence 333433 4889999999999998763 3 3 35554 788899999999999998875 22321 122334
Q ss_pred HhhcCCCCcEEEEEEEecCccccchhhhHHHHhhhccCCCceeecCC--CCccceeccCCCCCcccccCCCceEEEEEee
Q 025358 129 NIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPD--ADFSCFADLALTSPEDYYREGQGSLLQCVLT 206 (254)
Q Consensus 129 ~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~s~~~p~~~~~~g~~~~~~~~~~ 206 (254)
.+.++...++..|+|.|+++.=+ . +.. ..+.+-+... .....+..+-. ..+.+...++..++.
T Consensus 604 ai~~l~~g~~~KV~l~f~~~FW~----~---~~~---g~~~fG~l~~~~~~~~~~~~~~d-----~~p~g~~~vL~~~i~ 668 (776)
T 4gut_A 604 AINSLGAGIIEKIALQFPYRFWD----S---KVQ---GADFFGHVPPSASKRGLFAVFYD-----MDPQKKHSVLMSVIA 668 (776)
T ss_dssp HHHHEEEECCEEEEEECSSCTTH----H---HHT---TCSEEEECCSSGGGTTEEEEEEE-----SCTTSCSCEEEEEEC
T ss_pred HHHhCCCeeEEEEEEecCccccc----c---cCC---CCceEEeecCCcCCCceEEEEec-----CCCCCCceEEEEEec
Confidence 56666666788999999986410 0 010 1111111110 01111111100 112222345555554
Q ss_pred cC--CCCCCCCHHHHHHHHHHHHc--CCCCCcceeeeeeeEEe
Q 025358 207 PG--DPYMPLPNDEIIRRVAKQVG--FSSISIIPRFRSYLVVC 245 (254)
Q Consensus 207 ~~--~~~~~~~~eei~~~v~~~L~--~P~~~~~~~~~~~~v~~ 245 (254)
.. ..+..++++++++.++++|. |+.. ..+....+.+.+
T Consensus 669 G~~a~~l~~lsdeel~~~~l~~L~~ifg~~-~~~~P~~~~vt~ 710 (776)
T 4gut_A 669 GEAVASVRTLDDKQVLQQCMATLRELFKEQ-EVPDPTKYFVTR 710 (776)
T ss_dssp THHHHHHHTSCHHHHHHHHHHHHHHHTTTS-CCCCCSEEEECC
T ss_pred chhHHHHHcCCHHHHHHHHHHHHHHHhCcc-cccCcceEEEec
Confidence 32 35667899999999999999 7753 445667777777
No 22
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.45 E-value=9.7e-07 Score=85.11 Aligned_cols=173 Identities=12% Similarity=0.103 Sum_probs=104.1
Q ss_pred EEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEee---cCCCeEEEcCEEEEcCChhhHhh
Q 025358 39 RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATDKKVVQADAYVAACDVPGIKR 115 (254)
Q Consensus 39 g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~---~~~g~~~~aD~VV~a~p~~~~~~ 115 (254)
....|+++ .|+++|.+ |.+|++|++|++|..+++ + +.|++.+ +.+|+++.||+||+|+|+..+++
T Consensus 394 ~~~~gG~~-~l~~~La~-----~l~I~l~~~V~~I~~~~~--~----v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~ 461 (662)
T 2z3y_A 394 LTVRNGYS-CVPVALAE-----GLDIKLNTAVRQVRYTAS--G----CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 461 (662)
T ss_dssp EEETTCTT-HHHHHHTT-----TCEEETTEEEEEEEEETT--E----EEEEEEESSCTTCEEEEEESEEEECCCHHHHHC
T ss_pred eeecCcHH-HHHHHHHh-----cCceecCCeEEEEEECCC--c----EEEEEeecccCCCCeEEEeCEEEECCCHHHHhc
Confidence 34567775 46666654 568999999999998863 3 3455542 11267899999999999999987
Q ss_pred cC------CCcccCchhHHHhhcCCCCcEEEEEEEecCccccchhhhHHHHhhhccCCCceeec-C-CCC-ccceeccCC
Q 025358 116 LL------PSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYT-P-DAD-FSCFADLAL 186 (254)
Q Consensus 116 Ll------~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~-~-~~~-~~~~~~~s~ 186 (254)
+. |+. +....+.+.++.+.++..|+|.|+++.-+. ..+.+-+. . ... ..++..++
T Consensus 462 l~~~i~f~P~L--P~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~-------------~~~~~G~l~~~~~~~~~~~~~~~- 525 (662)
T 2z3y_A 462 QPPAVQFVPPL--PEWKTSAVQRMGFGNLNKVVLCFDRVFWDP-------------SVNLFGHVGSTTASRGELFLFWN- 525 (662)
T ss_dssp SSCSSEEESCC--CHHHHHHHHHSEECCCEEEEEECSSCCSCT-------------TCSEEEECCSSSTTTTEEEEEEC-
T ss_pred ccCceEEcCCC--CHHHHHHHHhCCccceeEEEEEcCcccccC-------------CCCceeeecCCCCCCCceeEEEe-
Confidence 42 322 111234567777778999999999865200 01111110 0 000 00110000
Q ss_pred CCCcccccCCCceEEEEEeec--CCCCCCCCHHHHHHHHHHHHc--CCCCCcceeeeeeeEEeeeCc
Q 025358 187 TSPEDYYREGQGSLLQCVLTP--GDPYMPLPNDEIIRRVAKQVG--FSSISIIPRFRSYLVVCCQNR 249 (254)
Q Consensus 187 ~~p~~~~~~g~~~~~~~~~~~--~~~~~~~~~eei~~~v~~~L~--~P~~~~~~~~~~~~v~~~~~~ 249 (254)
.. +. .++..++.. +..+..+++|++++.++++|. |+.. .......+.|.+ +.+
T Consensus 526 ----~~---~~-~vL~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~-~~~~p~~~~v~~-W~~ 582 (662)
T 2z3y_A 526 ----LY---KA-PILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSR-WRA 582 (662)
T ss_dssp ----CS---SS-SEEEEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTT-SSCCCSEEEECC-TTT
T ss_pred ----CC---CC-CEEEEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCc-ccCCCceeEEEE-ECC
Confidence 00 12 233344432 235667899999999999998 6653 345677888877 444
No 23
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.39 E-value=1.1e-06 Score=86.96 Aligned_cols=173 Identities=11% Similarity=0.091 Sum_probs=104.5
Q ss_pred EEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEee---cCCCeEEEcCEEEEcCChhhHhh
Q 025358 39 RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATDKKVVQADAYVAACDVPGIKR 115 (254)
Q Consensus 39 g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~---~~~g~~~~aD~VV~a~p~~~~~~ 115 (254)
....|+++ .|+++|.+ +.+|++|++|++|..+++ + +.|++.+ +.+|+++.||+||+|+|+..+++
T Consensus 565 ~~~~gG~~-~L~~aLa~-----~l~I~Lnt~V~~I~~~~~--g----V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~ 632 (852)
T 2xag_A 565 LTVRNGYS-CVPVALAE-----GLDIKLNTAVRQVRYTAS--G----CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 632 (852)
T ss_dssp EEETTCTT-HHHHHHTT-----TCCEECSEEEEEEEEETT--E----EEEEEEESSSTTCEEEEEESEEEECCCHHHHHC
T ss_pred EEecCcHH-HHHHHHHh-----CCCEEeCCeEEEEEEcCC--c----EEEEEeecccCCCCeEEECCEEEECCCHHHHHh
Confidence 44677775 46666654 457999999999999863 3 3455542 11267899999999999999987
Q ss_pred cCCCc----ccCchhHHHhhcCCCCcEEEEEEEecCccccchhhhHHHHhhhccCCCceeec-C-C---CCccceeccCC
Q 025358 116 LLPSS----WREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYT-P-D---ADFSCFADLAL 186 (254)
Q Consensus 116 Ll~~~----~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~-~-~---~~~~~~~~~s~ 186 (254)
++... ..+....+.+.++.+.++..|+|.|+++.-+. ..+.+-+. . . ....++-.
T Consensus 633 l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~-------------~~~~fG~l~~~~~~~~~l~~~~~--- 696 (852)
T 2xag_A 633 QPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP-------------SVNLFGHVGSTTASRGELFLFWN--- 696 (852)
T ss_dssp SSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT-------------TCCEEEECCSSSTTTTTTCEEEE---
T ss_pred hhcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCC-------------CCCeeeeeccccCCCCceEEEec---
Confidence 53210 01111234567777778999999999865200 01111110 0 0 00111100
Q ss_pred CCCcccccCCCceEEEEEee--cCCCCCCCCHHHHHHHHHHHHc--CCCCCcceeeeeeeEEeeeCc
Q 025358 187 TSPEDYYREGQGSLLQCVLT--PGDPYMPLPNDEIIRRVAKQVG--FSSISIIPRFRSYLVVCCQNR 249 (254)
Q Consensus 187 ~~p~~~~~~g~~~~~~~~~~--~~~~~~~~~~eei~~~v~~~L~--~P~~~~~~~~~~~~v~~~~~~ 249 (254)
. .+.. ++..++. .+..+..++++++++.++++|. |+.. .......+.|.+ +.+
T Consensus 697 ----~---~~~p-vLl~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~-~~~~P~~~~vtr-W~~ 753 (852)
T 2xag_A 697 ----L---YKAP-ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSR-WRA 753 (852)
T ss_dssp ----C---SSSS-EEEEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTT-TCCCCSEEEECC-TTT
T ss_pred ----C---CCCC-EEEEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCcc-ccCCceEEEEEe-cCC
Confidence 0 0122 4434443 2235667899999999999998 6653 345677888888 444
No 24
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.37 E-value=1.9e-05 Score=71.24 Aligned_cols=129 Identities=16% Similarity=0.084 Sum_probs=80.8
Q ss_pred hHHhHhCCCCCccccHHHHHHHHHHHHhc----cCCceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCC
Q 025358 4 PVAYALGFIDCDNISARCMLTIFALFATK----TEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAA 79 (254)
Q Consensus 4 pl~~a~l~~~~~~~SA~~~~~~l~~~~~~----~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~ 79 (254)
+++....+.+++++|+..++..+...... -..... .+.++++ .+.+ +.+++.| +|++|++|++|..+++
T Consensus 162 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~-~l~~---~~~~~~g-~i~~~~~V~~i~~~~~- 234 (431)
T 3k7m_X 162 AWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNGSA-DLVD---AMSQEIP-EIRLQTVVTGIDQSGD- 234 (431)
T ss_dssp HHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTCTH-HHHH---HHHTTCS-CEESSCCEEEEECSSS-
T ss_pred HHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCcHH-HHHH---HHHhhCC-ceEeCCEEEEEEEcCC-
Confidence 44455567788889988877665532100 000011 3455543 2332 2334456 9999999999998762
Q ss_pred CCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcC--CCcccCchhHHHhhcCCCCcEEEEEEEecCcc
Q 025358 80 NAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLL--PSSWREMKFFNNIYALVGVPVVTVQLRYNGWV 149 (254)
Q Consensus 80 ~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll--~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~ 149 (254)
+ + .|.+. +|++++||+||+|+|+..++++. |.. +....+.+..+.....+.|.+.|+.+.
T Consensus 235 -~---v-~v~~~---~g~~~~ad~vi~a~~~~~l~~i~~~p~l--~~~~~~~~~~~~~~~~~kv~~~~~~~~ 296 (431)
T 3k7m_X 235 -V---V-NVTVK---DGHAFQAHSVIVATPMNTWRRIVFTPAL--PERRRSVIEEGHGGQGLKILIHVRGAE 296 (431)
T ss_dssp -S---E-EEEET---TSCCEEEEEEEECSCGGGGGGSEEESCC--CHHHHHHHHHCCCCCEEEEEEEEESCC
T ss_pred -e---E-EEEEC---CCCEEEeCEEEEecCcchHhheeeCCCC--CHHHHHHHHhCCCcceEEEEEEECCCC
Confidence 3 3 35554 78789999999999999888763 321 122334455565567788899998754
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.32 E-value=1.3e-05 Score=69.69 Aligned_cols=146 Identities=10% Similarity=0.069 Sum_probs=90.3
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEE-cCEEEEcCChhhHhhcCCCcccCchhHHH
Q 025358 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQ-ADAYVAACDVPGIKRLLPSSWREMKFFNN 129 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~-aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~ 129 (254)
+.+.+.+.+ |++|+++++|++|..+++ + +.|++. +|+... ||.||.|++...+.++++.. ......
T Consensus 110 ~~l~~~l~~-g~~i~~~~~v~~i~~~~~--~----~~v~~~---~g~~~~~a~~vV~a~g~~~~~~~~~~~---~~l~~~ 176 (336)
T 1yvv_A 110 SAITRAMRG-DMPVSFSCRITEVFRGEE--H----WNLLDA---EGQNHGPFSHVIIATPAPQASTLLAAA---PKLASV 176 (336)
T ss_dssp HHHHHHHHT-TCCEECSCCEEEEEECSS--C----EEEEET---TSCEEEEESEEEECSCHHHHGGGGTTC---HHHHHH
T ss_pred HHHHHHHHc-cCcEEecCEEEEEEEeCC--E----EEEEeC---CCcCccccCEEEEcCCHHHHHHhhccC---HHHHHH
Confidence 455566554 899999999999998763 3 335553 677664 99999999999888877642 223355
Q ss_pred hhcCCCCcEEEEEEEecCccccchhhhHHHHhhhccCCCceeecCCCCccceeccCCCCCcccccCCCceEEEEEeec--
Q 025358 130 IYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTP-- 207 (254)
Q Consensus 130 ~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~~~~~g~~~~~~~~~~~-- 207 (254)
+..+.+.++..+++.|+++... +...+.+...+..+++..... |. . .+.+..+.+...+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~~--p~-~--~~~~~~~v~~~~~~~ 237 (336)
T 1yvv_A 177 VAGVKMDPTWAVALAFETPLQT--------------PMQGCFVQDSPLDWLARNRSK--PE-R--DDTLDTWILHATSQW 237 (336)
T ss_dssp HTTCCEEEEEEEEEEESSCCSC--------------CCCEEEECSSSEEEEEEGGGS--TT-C--CCSSEEEEEEECHHH
T ss_pred HhhcCccceeEEEEEecCCCCC--------------CCCeEEeCCCceeEEEecCcC--CC-C--CCCCcEEEEEeCHHH
Confidence 6778878999999999986430 122232222222222221111 10 0 0111222232222
Q ss_pred CCCCCCCCHHHHHHHHHHHHc
Q 025358 208 GDPYMPLPNDEIIRRVAKQVG 228 (254)
Q Consensus 208 ~~~~~~~~~eei~~~v~~~L~ 228 (254)
+..+..++++++.+++++++.
T Consensus 238 ~~~~~~~~~~~~~~~l~~~l~ 258 (336)
T 1yvv_A 238 SRQNLDASREQVIEHLHGAFA 258 (336)
T ss_dssp HHHTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHH
Confidence 245678899999999999998
No 26
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.31 E-value=3.5e-06 Score=76.09 Aligned_cols=94 Identities=11% Similarity=0.114 Sum_probs=62.5
Q ss_pred CCCCccccHHHHHHHHHH--HHhccCCceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEE
Q 025358 11 FIDCDNISARCMLTIFAL--FATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGL 88 (254)
Q Consensus 11 ~~~~~~~SA~~~~~~l~~--~~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv 88 (254)
...++++||.+++..+.. +.....+.. ....+++. .+++.+.+.+ +.+|++|++|++|..++ + ++. |
T Consensus 170 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~g~~-~l~~~l~~~l---~~~v~~~~~V~~i~~~~---~--~v~-v 238 (424)
T 2b9w_A 170 YGHFDNVPAAYVLKYLDFVTMMSFAKGDL-WTWADGTQ-AMFEHLNATL---EHPAERNVDITRITRED---G--KVH-I 238 (424)
T ss_dssp CCCTTTSBHHHHHHHSCHHHHHHHHHTCC-BCCTTCHH-HHHHHHHHHS---SSCCBCSCCEEEEECCT---T--CEE-E
T ss_pred cCChHhcCHHHHHHhhhHhhhhcccCCce-EEeCChHH-HHHHHHHHhh---cceEEcCCEEEEEEEEC---C--EEE-E
Confidence 346788999887543332 111111112 23556664 4677776554 56899999999999876 3 443 6
Q ss_pred EEeecCCCeEEEcCEEEEcCChhhHhhcCCC
Q 025358 89 AMSKATDKKVVQADAYVAACDVPGIKRLLPS 119 (254)
Q Consensus 89 ~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~ 119 (254)
.+. +|+ +.||+||+|+|+..+.++++.
T Consensus 239 ~~~---~g~-~~ad~Vv~a~~~~~~~~~l~~ 265 (424)
T 2b9w_A 239 HTT---DWD-RESDVLVLTVPLEKFLDYSDA 265 (424)
T ss_dssp EES---SCE-EEESEEEECSCHHHHTTSBCC
T ss_pred EEC---CCe-EEcCEEEECCCHHHHhhccCC
Confidence 654 564 899999999999888787765
No 27
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.13 E-value=1.1e-05 Score=74.20 Aligned_cols=66 Identities=17% Similarity=0.097 Sum_probs=57.9
Q ss_pred ceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEec--cCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 36 SLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYD--KAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 36 ~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~--~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
..+.++.|+.+ .++++|.+.+++.||+|++|++|++|..+ + + ++++|.+ +|+.+.||+||+|++++
T Consensus 232 ~~~~~p~gG~~-~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~---~--~~~~V~~----~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 232 SPYLYPMYGLG-ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT---G--KFEGVKT----KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp CSEEEETTCTT-HHHHHHHHHHHHTTCEEECSCCCCEEEEETTT---T--EEEEEEE----TTEEEECSCEEECGGGC
T ss_pred CceEeeCCCHH-HHHHHHHHHHHHcCCEEECCCEEEEEEEECCC---C--eEEEEEE----CCeEEECCEEEECCCcc
Confidence 45678899986 69999999999999999999999999987 5 5 6888876 68889999999999876
No 28
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.00 E-value=8.9e-06 Score=75.76 Aligned_cols=96 Identities=9% Similarity=0.020 Sum_probs=68.1
Q ss_pred EeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhc---
Q 025358 40 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRL--- 116 (254)
Q Consensus 40 ~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~L--- 116 (254)
+..| + +.+++.|.+.+. +++|++|++|++|..+++ + .+.|++. +|+.+.||+||+|+|+..++..
T Consensus 197 ~~~g-~-~~l~~~l~~~l~--~~~i~~~~~V~~I~~~~~--~---~v~v~~~---~g~~~~ad~VI~t~p~~~l~~~~~~ 264 (516)
T 1rsg_A 197 FALN-Y-DSVVQRIAQSFP--QNWLKLSCEVKSITREPS--K---NVTVNCE---DGTVYNADYVIITVPQSVLNLSVQP 264 (516)
T ss_dssp EESC-H-HHHHHHHHTTSC--GGGEETTCCEEEEEECTT--S---CEEEEET---TSCEEEEEEEEECCCHHHHHGGGSS
T ss_pred hhhC-H-HHHHHHHHHhCC--CCEEEECCEEEEEEEcCC--C---eEEEEEC---CCcEEECCEEEECCCHHHhhhcccc
Confidence 4454 3 356666665553 368999999999998632 2 2456664 7888999999999999988643
Q ss_pred ----------CCCcccCchhHHHhhcCCCCcEEEEEEEecCcc
Q 025358 117 ----------LPSSWREMKFFNNIYALVGVPVVTVQLRYNGWV 149 (254)
Q Consensus 117 ----------l~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~ 149 (254)
.|+. +....+.+.++.+.++..|+|.|+++.
T Consensus 265 ~~~~~~~i~f~P~L--p~~~~~ai~~~~~~~~~Kv~l~f~~~f 305 (516)
T 1rsg_A 265 EKNLRGRIEFQPPL--KPVIQDAFDKIHFGALGKVIFEFEECC 305 (516)
T ss_dssp CSCSTTCCEEESCC--CHHHHHHTTSSCCCCCEEEEEEESSCC
T ss_pred ccccccceEecCCC--CHHHHHHHHhCCCCcceEEEEEeCCCC
Confidence 2321 222445677888888999999999865
No 29
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.87 E-value=4.1e-06 Score=76.01 Aligned_cols=110 Identities=9% Similarity=-0.053 Sum_probs=77.3
Q ss_pred CchhHHhHhCCCCCccccHHHHHHHHHHHHhccC---CceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEecc
Q 025358 1 MWDPVAYALGFIDCDNISARCMLTIFALFATKTE---ASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDK 77 (254)
Q Consensus 1 ~w~pl~~a~l~~~~~~~SA~~~~~~l~~~~~~~~---~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~ 77 (254)
||+|++....+.+++++||.|+..+-.++..... +.--|++.|++. .+++.|+ +..|++|++|++|+++
T Consensus 175 ~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~-~l~e~l~---~~~g~~V~l~~~v~~~---- 246 (397)
T 3hdq_A 175 FFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYT-RMFQNML---SSPNIKVMLNTDYREI---- 246 (397)
T ss_dssp HTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHH-HHHHHHT---CSTTEEEEESCCGGGT----
T ss_pred HHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHH-HHHHHHH---hccCCEEEECCeEEec----
Confidence 5899999999999999999876421111111111 122378999996 5777764 4679999999999832
Q ss_pred CCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCCCCcEEEEEEEecCc
Q 025358 78 AANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGW 148 (254)
Q Consensus 78 ~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~ 148 (254)
+ ..+.+|.||+|+|++.+... .+.+|++.++.++++.++.+
T Consensus 247 ---~---------------~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl~~~~~~~~~~ 287 (397)
T 3hdq_A 247 ---A---------------DFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSLEFRHETHDTE 287 (397)
T ss_dssp ---T---------------TTSCEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSS
T ss_pred ---c---------------ccccCCEEEEcCCHHHHHHH------------hcCCCCCceEEEEEEEeccc
Confidence 1 12358999999998776321 24467788999999999853
No 30
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.73 E-value=1.2e-06 Score=78.38 Aligned_cols=110 Identities=10% Similarity=-0.087 Sum_probs=76.4
Q ss_pred CchhHHhHhCCCCCccccHHHHHHHHHHHHhcc---CCceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEecc
Q 025358 1 MWDPVAYALGFIDCDNISARCMLTIFALFATKT---EASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDK 77 (254)
Q Consensus 1 ~w~pl~~a~l~~~~~~~SA~~~~~~l~~~~~~~---~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~ 77 (254)
||+|++.+..+.+|+++||.++..+..++.... .+.-.|+++|++. .++++|++ |++|++|++|++|. +
T Consensus 147 ~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~-~l~~~l~~-----g~~i~l~~~V~~i~--~ 218 (367)
T 1i8t_A 147 LIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYT-KLIEKMLE-----GVDVKLGIDFLKDK--D 218 (367)
T ss_dssp HTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHH-HHHHHHHT-----TSEEECSCCGGGSH--H
T ss_pred HHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHH-HHHHHHhc-----CCEEEeCCceeeec--h
Confidence 578999999999999999987521111111111 1112468999985 46777765 79999999999873 2
Q ss_pred CCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCCCCcEEEEEEEecCc
Q 025358 78 AANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGW 148 (254)
Q Consensus 78 ~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~ 148 (254)
++ . +.||+||+|+|++.+.++ .+.++++.++.++.+.+|.+
T Consensus 219 ------~v-----~-------~~~D~VV~a~p~~~~~~~------------~l~~l~y~s~~~v~~~~d~~ 259 (367)
T 1i8t_A 219 ------SL-----A-------SKAHRIIYTGPIDQYFDY------------RFGALEYRSLKFETERHEFP 259 (367)
T ss_dssp ------HH-----H-------TTEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSS
T ss_pred ------hh-----h-------ccCCEEEEeccHHHHHHH------------hhCCCCCceEEEEEEEeccc
Confidence 21 1 248999999999876543 13456777899999999875
No 31
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.40 E-value=0.00038 Score=62.93 Aligned_cols=57 Identities=14% Similarity=0.158 Sum_probs=50.9
Q ss_pred hhHHHHHHHHHhCCcEEEcCc---eeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRW---GCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~---~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.|.+.++++|++|++++ +|++|..++ + ++.||++. +|+++.||.||.|+..++
T Consensus 162 ~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~---~--~v~gV~t~---~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 162 NALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN---N--DVKGAVTA---DGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET---T--EEEEEEET---TTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC---C--eEEEEEEC---CCCEEECCEEEECCCCCh
Confidence 678899999999999999999 999999876 5 78889886 788899999999999864
No 32
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.38 E-value=2.4e-06 Score=77.33 Aligned_cols=113 Identities=8% Similarity=-0.163 Sum_probs=77.5
Q ss_pred CchhHHhHhCCCCCccccHHHHHHHHHHHHhccC-Cc-ee-EEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEecc
Q 025358 1 MWDPVAYALGFIDCDNISARCMLTIFALFATKTE-AS-LL-RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDK 77 (254)
Q Consensus 1 ~w~pl~~a~l~~~~~~~SA~~~~~~l~~~~~~~~-~~-~~-g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~ 77 (254)
+|+|++.+..+.+++++|+.++..+...+..... .. .+ |++.|++. .++++|++ +.|++|++|++|++|. .
T Consensus 157 ~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~-~l~~~l~~---~~g~~I~l~~~V~~I~--~ 230 (399)
T 1v0j_A 157 FVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYT-AWLQNMAA---DHRIEVRLNTDWFDVR--G 230 (399)
T ss_dssp HTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHH-HHHHHHTC---STTEEEECSCCHHHHH--H
T ss_pred HHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHH-HHHHHHHh---cCCeEEEECCchhhhh--h
Confidence 4788888889999999999875211111111111 11 23 58888875 47777765 5689999999999884 1
Q ss_pred CCCCcceEEEEEEeecCCCeEE-EcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCCCCcEEEEEEEecCc
Q 025358 78 AANAETYVKGLAMSKATDKKVV-QADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGW 148 (254)
Q Consensus 78 ~~~g~~~v~gv~l~~~~~g~~~-~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~ 148 (254)
. | + .+ .||+||+|+|++.+.++. +..+++.++.++.+.++.+
T Consensus 231 ------~---v------~--~~~~aD~VI~t~p~~~l~~~~------------l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 231 ------Q---L------R--PGSPAAPVVYTGPLDRYFDYA------------EGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp ------H---H------T--TTSTTCCEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEESSS
T ss_pred ------h---h------h--hcccCCEEEECCcHHHHHhhh------------hCCCCcceEEEEEEEEccc
Confidence 2 1 1 23 599999999998876651 2356677888889888764
No 33
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.30 E-value=1.6e-05 Score=71.57 Aligned_cols=107 Identities=10% Similarity=-0.004 Sum_probs=74.2
Q ss_pred CchhHHhHhCCCCCccccHHHHHHHHHHHHhcc---CCceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceee-EEEec
Q 025358 1 MWDPVAYALGFIDCDNISARCMLTIFALFATKT---EASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCR-EILYD 76 (254)
Q Consensus 1 ~w~pl~~a~l~~~~~~~SA~~~~~~l~~~~~~~---~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~-~i~~~ 76 (254)
||+|++.+..+.+|+++|+.++..+...+.... .+.-.|+++|+++ .++++|++ +.|++|++|++|+ +|.
T Consensus 151 ~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~-~l~~~l~~---~~g~~I~l~~~V~~~i~-- 224 (384)
T 2bi7_A 151 FFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYT-QMIKSILN---HENIKVDLQREFIVEER-- 224 (384)
T ss_dssp HTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHH-HHHHHHHC---STTEEEEESCCCCGGGG--
T ss_pred HHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHH-HHHHHHHh---cCCCEEEECCeeehhhh--
Confidence 478999999999999999987521111111111 1112368998885 57777765 4689999999998 651
Q ss_pred cCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCCCcccCchhHHHhhcCCCCcEEEEEEEecC
Q 025358 77 KAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNG 147 (254)
Q Consensus 77 ~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~ 147 (254)
+ .||+||+|+|++.+.+++ +..+++.++.++++.+|.
T Consensus 225 -------~---------------~~d~VI~a~p~~~~~~~~------------lg~l~y~s~~~v~~~~d~ 261 (384)
T 2bi7_A 225 -------T---------------HYDHVFYSGPLDAFYGYQ------------YGRLGYRTLDFKKFTYQG 261 (384)
T ss_dssp -------G---------------GSSEEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEEES
T ss_pred -------c---------------cCCEEEEcCCHHHHHHhh------------cCCCCcceEEEEEEEeCC
Confidence 0 289999999998876652 234667788888888873
No 34
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.15 E-value=0.00097 Score=59.90 Aligned_cols=58 Identities=22% Similarity=0.241 Sum_probs=50.4
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.++++|++|+++++|++|..++ + ++.+|.+. +|++++||.||+++...
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v~~V~~~---dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEG---D--RVTGVVLS---DGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEET---TSCEEECSEEEECCCEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecC---C--cEEEEEeC---CCCEEEcCEEEECcCCc
Confidence 34678889999999999999999999998765 5 68889886 89999999999999863
No 35
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.15 E-value=0.0011 Score=59.77 Aligned_cols=58 Identities=21% Similarity=0.137 Sum_probs=50.4
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.++++|++|+++++|++|..++ + ++.+|.+. +|+.++||.||+++...
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v~~v~l~---dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG---T--KVTGVRMQ---DGSVIPADIVIVGIGIV 250 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS---S--BEEEEEES---SSCEEECSEEEECSCCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC---C--cEEEEEeC---CCCEEEcCEEEECCCCc
Confidence 34678889999999999999999999998865 5 68889886 88999999999998853
No 36
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.03 E-value=0.0017 Score=62.98 Aligned_cols=106 Identities=10% Similarity=-0.040 Sum_probs=69.8
Q ss_pred ceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceee--EEEeccCCCCcc-eEEEEEEeecCCCe--EEEcCEEEEcCCh
Q 025358 36 SLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCR--EILYDKAANAET-YVKGLAMSKATDKK--VVQADAYVAACDV 110 (254)
Q Consensus 36 ~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~--~i~~~~~~~g~~-~v~gv~l~~~~~g~--~~~aD~VV~a~p~ 110 (254)
.....+.|+.. .|+++|.+.+.. |+.|+++++|+ +|...++ ++. ....|++..+.+|+ ++.||+||+|+|+
T Consensus 337 ~~~~~i~GG~~-~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~--g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~ 412 (721)
T 3ayj_A 337 NEYTLPVTENV-EFIRNLFLKAQN-VGAGKLVVQVRQERVANACH--SGTASARAQLLSYDSHNAVHSEAYDFVILAVPH 412 (721)
T ss_dssp CEECCSSSSTH-HHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEE--CSSSSCCEEEEEEETTCCEEEEEESEEEECSCH
T ss_pred cceeEECCcHH-HHHHHHHHhccc-CCceEeCCEEEeeeEEECCC--CCccccceEEEEEecCCceEEEEcCEEEECCCH
Confidence 34566777875 689999998764 78899999999 9998653 200 00123332123676 7899999999999
Q ss_pred hhHhh------cC-----------------------CCcccC-------chhHHHhhcCCCCcEEEEEEEe
Q 025358 111 PGIKR------LL-----------------------PSSWRE-------MKFFNNIYALVGVPVVTVQLRY 145 (254)
Q Consensus 111 ~~~~~------Ll-----------------------~~~~~~-------~~~~~~~~~l~~~~i~~v~L~~ 145 (254)
..+.. +- |+...+ ....+.+.++.+.+..-|.+.|
T Consensus 413 ~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~ 483 (721)
T 3ayj_A 413 DQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATV 483 (721)
T ss_dssp HHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEE
T ss_pred HHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEE
Confidence 88743 21 110001 2234556788877888999999
No 37
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.00 E-value=0.0061 Score=53.58 Aligned_cols=55 Identities=15% Similarity=0.012 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.+.+.+++.|++|+++++|++|..++ + ++ +|.+. +| ++.||.||.|+....
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~---~--~~-~v~~~---~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERDG---E--AL-FIKTP---SG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECSS---S--SE-EEEET---TE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEEC---C--EE-EEEcC---Cc-eEEcCEEEECCChhH
Confidence 578899999999999999999999999876 3 45 66653 45 799999999998753
No 38
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.93 E-value=0.0019 Score=58.85 Aligned_cols=59 Identities=14% Similarity=0.184 Sum_probs=50.3
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
...+.+.|.+.+++.|++|+++++|++|..++ + ++.+|.+. +|+.+.||.||.|+....
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~---~--~v~~V~~~---~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYEN---G--QTKAVILQ---TGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEET---TCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC---C--cEEEEEEC---CCCEEECCEEEECCCCCc
Confidence 35688999999999999999999999999865 5 67888875 777799999999988544
No 39
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.91 E-value=0.0018 Score=56.38 Aligned_cols=57 Identities=7% Similarity=-0.037 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~~ 112 (254)
.+.+.+.+.++++|++|+++++|++|..+++ + ++.|.+. +| ..+.||.||.|+..+.
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~--~---~~~v~~~---~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 151 ALMLAYQGDAESDGAQLVFHTPLIAGRVRPE--G---GFELDFG---GAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECTT--S---SEEEEEC---TTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEcCC--c---eEEEEEC---CCceeEEEeCEEEECCCcch
Confidence 6788999999999999999999999998763 3 3456664 56 4899999999999763
No 40
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.84 E-value=0.0023 Score=60.32 Aligned_cols=57 Identities=14% Similarity=0.288 Sum_probs=50.4
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.|.+.+++.|++|+++++|++|..++ + ++.+|.+. +|+++.||.||.|+....
T Consensus 221 ~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~---~--~v~gV~l~---~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 221 TMIEKMRATIIELGGEIRFSTRVDDLHMED---G--QITGVTLS---NGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEESS---S--BEEEEEET---TSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEeC---C--EEEEEEEC---CCCEEECCEEEECCCCCh
Confidence 578899999999999999999999999876 4 68889886 788999999999998754
No 41
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.81 E-value=0.0029 Score=55.81 Aligned_cols=56 Identities=11% Similarity=0.147 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.+.+.+++.|++|+.+++|++|..++ + ++.+|.+. +| .++||.||.|+..+.
T Consensus 150 ~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~---~--~v~gv~~~---~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 150 EATTAFAVKAKEYGAKLLEYTEVKGFLIEN---N--EIKGVKTN---KG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS---S--BEEEEEET---TE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEECCceEEEEEEEC---C--EEEEEEEC---Cc-EEECCEEEECcchhH
Confidence 577889999999999999999999999876 4 67778764 55 799999999998764
No 42
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.79 E-value=0.0019 Score=56.63 Aligned_cols=55 Identities=15% Similarity=-0.026 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+...|.+.++++|++|+++++|++|..++ + + ++|.+. +| ++.||.||.|+..+.
T Consensus 155 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~---~--~-~~V~t~---~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 155 ALHQGYLRGIRRNQGQVLCNHEALEIRRVD---G--A-WEVRCD---AG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCCCEEEEET---T--E-EEEECS---SE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEeC---C--e-EEEEeC---CC-EEEcCEEEECCChhH
Confidence 678999999999999999999999999876 4 3 556553 45 899999999998754
No 43
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.79 E-value=0.0024 Score=59.24 Aligned_cols=57 Identities=21% Similarity=0.236 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcC-EEEEcCCh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQAD-AYVAACDV 110 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD-~VV~a~p~ 110 (254)
.+.+.|.+.++++|++|+++++|++|..+++ | +|+||++.. +|+ ++.|| .||+|+.-
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~--g--~v~GV~~~~--~g~~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDT--G--RVVGIVAKQ--YGKEVAVRARRGVVLATGS 262 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTT--C--CEEEEEEEE--TTEEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCC--C--cEEEEEEEE--CCcEEEEEeCCeEEEeCCC
Confidence 5889999999999999999999999999842 6 799998863 343 58897 99999874
No 44
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.57 E-value=0.0032 Score=56.70 Aligned_cols=56 Identities=16% Similarity=0.159 Sum_probs=47.5
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
..+.+.+.+.++++|++|+++++|++|..++ ++.+|.+. +|+++++|.||+++...
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~------~~~~v~~~---dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG------QLEQVMAS---DGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS------SCCEEEET---TSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC------cEEEEEEC---CCCEEEcCEEEEeeCCe
Confidence 3567788899999999999999999998653 46678886 89999999999999863
No 45
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.56 E-value=0.0045 Score=54.86 Aligned_cols=56 Identities=11% Similarity=0.069 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.|.+.+++.|++|+++++|++|..++ + ++++|.+. +| .+.||.||.|+....
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~---~--~~~~v~~~---~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDG---E--KVTGVKTT---RG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS---S--BEEEEEET---TC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeC---C--EEEEEEeC---Cc-eEECCEEEECCchhH
Confidence 578889999999999999999999999876 4 57788764 56 789999999998753
No 46
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.52 E-value=0.0047 Score=54.53 Aligned_cols=65 Identities=12% Similarity=0.153 Sum_probs=52.3
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh-HhhcC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLL 117 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~-~~~Ll 117 (254)
.+.+.|.+.+++.|++|+.+++|+++..++ + ++.||.+....++.+++||.||.|...+. +.+.+
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~---~--~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~ 168 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN---G--KVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET---T--EEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeC---C--EEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhc
Confidence 467888899999999999999999999876 5 68888885433567899999999988754 55543
No 47
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.44 E-value=0.0081 Score=51.36 Aligned_cols=60 Identities=12% Similarity=0.110 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeec---CCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA---TDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~---~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.+.+.+++.|++|+++++|++|..++ + ++.+|++... ++++.+++|.||++++...
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGDQ---M--GVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEECS---S--SEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcCC---C--ceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 466778888899999999999999998765 4 5778888621 1236799999999998643
No 48
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.42 E-value=0.0049 Score=55.74 Aligned_cols=56 Identities=14% Similarity=0.088 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEe---------------ccCCCCcceEEEEEEeecCCCeEE--EcCEEEEcCCh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILY---------------DKAANAETYVKGLAMSKATDKKVV--QADAYVAACDV 110 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~---------------~~~~~g~~~v~gv~l~~~~~g~~~--~aD~VV~a~p~ 110 (254)
.+.+.|.+.+++.|++|+.+++|++|.. ++ + ++++|.+. +| ++ .||.||.|+..
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~---~--~v~~V~t~---~g-~i~~~Ad~VV~AtG~ 252 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE---A--RASAAVLS---DG-TRVEVGEKLVVAAGV 252 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC---E--EEEEEEET---TS-CEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC---C--ceEEEEeC---CC-EEeecCCEEEECCCc
Confidence 6788999999999999999999999997 44 4 57778764 56 68 99999999997
Q ss_pred hh
Q 025358 111 PG 112 (254)
Q Consensus 111 ~~ 112 (254)
+.
T Consensus 253 ~s 254 (448)
T 3axb_A 253 WS 254 (448)
T ss_dssp GH
T ss_pred CH
Confidence 64
No 49
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.42 E-value=0.0061 Score=58.54 Aligned_cols=56 Identities=9% Similarity=0.026 Sum_probs=47.5
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+...|.+.+++.|++|+++++|++|..++ + + ++|.+. +|+++.||.||.|+....
T Consensus 418 ~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~---~--~-v~V~t~---~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 418 ELTRNVLELAQQQGLQIYYQYQLQNFSRKD---D--C-WLLNFA---GDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET---T--E-EEEEET---TSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHhCCCEEEeCCeeeEEEEeC---C--e-EEEEEC---CCCEEECCEEEECCCcch
Confidence 678899999999999999999999999886 4 3 356654 677899999999998763
No 50
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.40 E-value=0.01 Score=54.25 Aligned_cols=58 Identities=19% Similarity=0.176 Sum_probs=47.8
Q ss_pred CcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
....+.+.+.+.+++.|++|+++++|++|..++ + ++. +.+. +|+++++|.||+++...
T Consensus 200 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v~-v~~~---~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 200 TSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN---G--KVA-RVIT---DKRTLDADLVILAAGVS 257 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS---S--BEE-EEEE---SSCEEECSEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC---C--eEE-EEEe---CCCEEEcCEEEECCCCC
Confidence 344678889999999999999999999998754 4 444 6665 78899999999999853
No 51
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.38 E-value=0.0086 Score=56.29 Aligned_cols=59 Identities=20% Similarity=0.161 Sum_probs=49.3
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCCh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~ 110 (254)
..+.+.|.+.+++.|++|+++++|++|..+++ | +|.||++.. .+|+ .+.||.||+|+..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~--g--~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK--G--TVKGILVKG-MYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTT--S--CEEEEEEEE-TTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC--C--eEEEEEEEe-CCCcEEEEECCeEEEeCCC
Confidence 36788999999999999999999999998752 5 789988752 2465 6889999999875
No 52
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.37 E-value=0.0079 Score=54.51 Aligned_cols=56 Identities=14% Similarity=0.071 Sum_probs=47.6
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEe--ccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILY--DKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~--~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
..+.+.+.+.+++.|++|+++++|++|.. ++ + ++.+|.+. +|+.+++|.||+++..
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~---~--~v~~v~~~---~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ---Q--KVTAVLCE---DGTRLPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT---C--CEEEEEET---TSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC---C--cEEEEEeC---CCCEEEcCEEEECCCC
Confidence 35677889999999999999999999986 43 4 57788875 7889999999999985
No 53
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.35 E-value=0.008 Score=56.58 Aligned_cols=65 Identities=17% Similarity=0.114 Sum_probs=52.5
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChhh--HhhcC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG--IKRLL 117 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~~--~~~Ll 117 (254)
.+...+.+.+++.|++|+.+++|++|..++ + ++++|++.+..+| ..+.||.||.|+.+++ +.+++
T Consensus 171 ~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~---g--~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~ 239 (561)
T 3da1_A 171 RLTLEIMKEAVARGAVALNYMKVESFIYDQ---G--KVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKD 239 (561)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEET---T--EEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcC---C--eEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhc
Confidence 678889999999999999999999999876 5 7889988642223 5789999999998754 45544
No 54
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.30 E-value=0.016 Score=52.62 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=52.5
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChhh-HhhcCC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPG-IKRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~~-~~~Ll~ 118 (254)
.+.+.|.+.+++.|++|+++++|+++..++ + ++.||++....+|+ +++||.||.|...+. +++.+.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~---~--~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~ 169 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFED---G--YVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLP 169 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET---T--EEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEEC---C--EEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcC
Confidence 467888899999999999999999999876 4 68888775321565 789999999998764 665554
No 55
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.29 E-value=0.0075 Score=58.07 Aligned_cols=56 Identities=9% Similarity=0.031 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe-EEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK-VVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~-~~~aD~VV~a~p~~~ 112 (254)
.+.+.+.+.+++.|++|+++++|++|..++ + + +.|.+. +|+ .+.||.||.|+....
T Consensus 413 ~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~---~--~-v~V~t~---~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 413 DLTHALMMLAQQNGMTCHYQHELQRLKRID---S--Q-WQLTFG---QSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECS---S--S-EEEEEC----CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHhCCCEEEeCCeEeEEEEeC---C--e-EEEEeC---CCcEEEECCEEEECCCcch
Confidence 678899999999999999999999999886 3 3 356664 666 799999999998873
No 56
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.27 E-value=0.0072 Score=54.99 Aligned_cols=58 Identities=12% Similarity=0.033 Sum_probs=47.0
Q ss_pred CcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
+...+.+.+.+.++++|++|+++++|++|..++ + ++.++.+ +|+++++|.||+++...
T Consensus 189 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~--~v~~v~~----~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 189 FDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD---D--EIITKTL----DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESSCEEEEEEET---T--EEEEEET----TSCEEEESEEEECCCEE
T ss_pred hhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC---C--eEEEEEe----CCCEEECCEEEECcCCC
Confidence 334677889999999999999999999998644 4 5655543 67889999999999853
No 57
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.22 E-value=0.015 Score=54.84 Aligned_cols=59 Identities=22% Similarity=0.234 Sum_probs=48.0
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCCh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~ 110 (254)
..+.+.|.+.+++.|++|+++++|++|..+++ | ++.||++.+ .+|+ .+.||.||+|+..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~--g--~v~GV~~~~-~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDAS--G--KVTGVLVKG-EYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC----C--CEEEEEEEE-TTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCC--C--eEEEEEEEe-CCCcEEEEEcCEEEEeCCC
Confidence 36788999999999999999999999988752 5 789998752 2454 6889999999884
No 58
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.15 E-value=0.013 Score=55.09 Aligned_cols=60 Identities=15% Similarity=0.128 Sum_probs=49.4
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
..+.+.|.+.+++.|++|+++++|++|..+++ | +|.||++.. .+|+ .+.||.||+|+...
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~--g--~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD--H--SVVGAVVHG-KHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTT--S--BEEEEEEEE-TTTEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC--C--cEEEEEEEe-CCCcEEEEEcCEEEEecCCc
Confidence 35789999999999999999999999998752 5 789988752 2565 68899999998853
No 59
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.14 E-value=0.01 Score=58.43 Aligned_cols=56 Identities=20% Similarity=0.149 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.|.+.++++|++|+.+++|++|..++ + ++++|.+. +| +++||.||.|+..+.
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~---~--~v~~V~t~---~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSG---G--RVTGVQTA---DG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEET---TE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeC---C--EEEEEEEC---Cc-EEECCEEEECCccch
Confidence 578999999999999999999999999876 4 67778764 55 799999999999764
No 60
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.13 E-value=0.013 Score=55.30 Aligned_cols=60 Identities=12% Similarity=0.061 Sum_probs=48.9
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~~ 112 (254)
.+...+.+.+++.|++|+.+++|++|..++ + ++++|++.+..+| ..+.||.||.|+.+++
T Consensus 189 ~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~---~--~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 189 RLVIDNIKKAAEDGAYLVSKMKAVGFLYEG---D--QIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET---T--EEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCeEEeccEEEEEEEeC---C--EEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 577788899999999999999999999876 5 7889887532123 3789999999999764
No 61
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.10 E-value=0.013 Score=51.26 Aligned_cols=60 Identities=17% Similarity=0.075 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~ 118 (254)
.+.+.+.+.+++.|++|+.+++|++|..++ + + +.|.+. +| .+.||.||.|+..+. .+|++
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~--~-~~v~~~---~g-~~~a~~vV~a~G~~s-~~l~~ 209 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDD---D--G-VTIETA---DG-EYQAKKAIVCAGTWV-KDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS---S--S-EEEEES---SC-EEEEEEEEECCGGGG-GGTST
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcC---C--E-EEEEEC---CC-eEEcCEEEEcCCccH-Hhhcc
Confidence 578899999999999999999999999876 3 2 345553 55 589999999999764 23444
No 62
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.99 E-value=0.014 Score=48.07 Aligned_cols=56 Identities=9% Similarity=0.017 Sum_probs=46.7
Q ss_pred hhHHHHHHHHHhC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.+.+.+++. |++++ +++|++|..++ + ++.+|.+. +|++++||.||.|+....
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~---~--~v~~v~~~---~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEG---N--RVVGVRTW---EGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET---T--EEEEEEET---TSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC---C--EEEEEEEC---CCCEEECCEEEECCCCCh
Confidence 5678888999997 99999 67999999875 4 67788775 788899999999998754
No 63
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.99 E-value=0.014 Score=53.18 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=46.8
Q ss_pred CcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
+...+.+.+.+.++++|++|+++++|++|...+ + ++ .|.+. +| ++++|.||+++....
T Consensus 187 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v-~v~~~---~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 187 FDKEMVAEVQKSLEKQAVIFHFEETVLGIEETA---N--GI-VLETS---EQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp CCHHHHHHHHHHHHTTTEEEEETCCEEEEEECS---S--CE-EEEES---SC-EEEESEEEECSCCBC
T ss_pred CCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC---C--eE-EEEEC---CC-EEEeCEEEECcCCCC
Confidence 344678899999999999999999999998665 4 45 66663 55 899999999998643
No 64
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=95.97 E-value=0.015 Score=54.14 Aligned_cols=58 Identities=10% Similarity=0.016 Sum_probs=46.2
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEE--EEEEeecCCCe-EEEcCEEEEcCCh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVK--GLAMSKATDKK-VVQADAYVAACDV 110 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~--gv~l~~~~~g~-~~~aD~VV~a~p~ 110 (254)
...+.+.+.+.++++|++|+++++|++|..+++ + ++. .|.+. +|+ +++||.||+++..
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~--~--~v~~~~v~~~---~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDAN--G--RVQAVVAMTP---NGEMRIETDFVFLGLGE 314 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTT--S--BEEEEEEEET---TEEEEEECSCEEECCCC
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCC--C--ceEEEEEEEC---CCcEEEEcCEEEECcCC
Confidence 345778899999999999999999999987542 4 553 34443 676 8999999999875
No 65
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.94 E-value=0.015 Score=53.77 Aligned_cols=58 Identities=14% Similarity=0.131 Sum_probs=47.5
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.++++|++|+++++|++|..+++ + ...|.+. +|+.+++|.||+++...
T Consensus 234 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~---~~~v~~~---~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 234 DETIREEVTKQLTANGIEIMTNENPAKVSLNTD--G---SKHVTFE---SGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEEECTT--S---CEEEEET---TSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--c---eEEEEEC---CCcEEEcCEEEECCCCc
Confidence 345788899999999999999999999987652 3 3467665 78889999999999853
No 66
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.91 E-value=0.016 Score=53.42 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=46.9
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
+..+.+.+.+.++++|++|+++++|++|..++ + ++ .|++. +|+++++|.||.++...
T Consensus 225 ~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~---~--~~-~v~l~---dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 225 PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSS---G--KL-LIKLK---DGRKVETDHIVAAVGLE 281 (493)
T ss_dssp CHHHHHHHHHHHHTTTCEEECSCCEEEEEEET---T--EE-EEEET---TSCEEEESEEEECCCEE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEecC---C--eE-EEEEC---CCCEEECCEEEECCCCC
Confidence 34577888999999999999999999998654 3 33 67775 78899999999998853
No 67
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.90 E-value=0.015 Score=53.43 Aligned_cols=58 Identities=12% Similarity=0.080 Sum_probs=47.1
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-eEEEcCEEEEcCCh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDV 110 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g-~~~~aD~VV~a~p~ 110 (254)
...+.+.+.+.+++.|++|+++++|++|..+++ + ++..|.+. +| +.+++|.||.++..
T Consensus 225 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~--~~~~v~~~---~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 225 DECIQNTITDHYVKEGINVHKLSKIVKVEKNVE--T--DKLKIHMN---DSKSIDDVDELIWTIGR 283 (479)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECC---C--CCEEEEET---TSCEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCC--C--cEEEEEEC---CCcEEEEcCEEEECCCC
Confidence 346788899999999999999999999987542 3 34567665 77 78999999999985
No 68
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.87 E-value=0.017 Score=51.25 Aligned_cols=57 Identities=19% Similarity=0.155 Sum_probs=46.8
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.+++.|++|+++++|++|..++ + ...|.+. +|+++++|.||.++...
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~---~~~v~~~---~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG---E---GLEAHLS---DGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEET---T---EEEEEET---TSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC---C---EEEEEEC---CCCEEECCEEEECcCCC
Confidence 34567899999999999999999999998765 2 2456665 78899999999999853
No 69
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.85 E-value=0.022 Score=53.86 Aligned_cols=60 Identities=13% Similarity=0.078 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
.+.+.|.+.+++.|++|+++++|.+|..+++ | ++.||.+.+..+|+ .+.||+||+|+...
T Consensus 144 ~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~--g--~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 144 ALLHTLYQQNLKNHTTIFSEWYALDLVKNQD--G--AVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEECTT--S--CEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEeCcEEEEEEECCC--C--EEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 5788899999999999999999999998632 5 78998875323564 58899999998853
No 70
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.84 E-value=0.017 Score=53.31 Aligned_cols=58 Identities=9% Similarity=0.054 Sum_probs=47.4
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.++++|++|+++++|++|..+++ + ...|.+. +|+.+++|.||.++...
T Consensus 230 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~---~~~v~~~---~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 230 DSELRKQLTEQLRANGINVRTHENPAKVTKNAD--G---TRHVVFE---SGAEADYDVVMLAIGRV 287 (490)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCCEEEEEECTT--S---CEEEEET---TSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--C---EEEEEEC---CCcEEEcCEEEEccCCC
Confidence 346788899999999999999999999987652 3 3456665 78889999999999853
No 71
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.83 E-value=0.019 Score=52.72 Aligned_cols=57 Identities=12% Similarity=0.112 Sum_probs=47.5
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.+++.|++|+++++|++|..++ + ++ .|.+. +|+++++|.||.++...
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~---~--~v-~v~~~---~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTE---N--CY-NVVLT---NGQTICADRVMLATGRV 287 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECS---S--SE-EEEET---TSCEEEESEEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC---C--EE-EEEEC---CCcEEEcCEEEEeeCCC
Confidence 34578889999999999999999999998875 3 33 66665 78889999999999864
No 72
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=95.82 E-value=0.021 Score=52.80 Aligned_cols=59 Identities=17% Similarity=0.005 Sum_probs=48.5
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~~ 112 (254)
.+...+.+.+++.|++|+.+++|++|..++ ++++|.+.+..+|+ .+.||.||.|+.++.
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~------~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARREN------GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEET------TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEeC------CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 578899999999999999999999999864 46788774322565 789999999998764
No 73
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=95.81 E-value=0.023 Score=49.85 Aligned_cols=55 Identities=7% Similarity=0.024 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.+.+.+++.|++|+.+++|++|..++ + + +.|.+ ++..++||.||.|+..+.
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~---~--~-~~v~~----~~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 151 NCIRAYRELAEARGAKVLTHTRVEDFDISP---D--S-VKIET----ANGSYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS---S--C-EEEEE----TTEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCcEEEEEEecC---C--e-EEEEe----CCCEEEeCEEEEecCccH
Confidence 678899999999999999999999999876 3 2 33544 334799999999999764
No 74
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.79 E-value=0.022 Score=52.44 Aligned_cols=58 Identities=14% Similarity=0.111 Sum_probs=46.9
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
...+.+.+.+.++++|++|+++++|++|..++ + ++ .+.+. +|+++++|.||+++....
T Consensus 222 d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~---~--~v-~v~~~---~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 222 DADAALVLEESFAERGVRLFKNARAASVTRTG---A--GV-LVTMT---DGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp SHHHHHHHHHHHHHTTCEEETTCCEEEEEECS---S--SE-EEEET---TSCEEEESEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC---C--EE-EEEEC---CCcEEEcCEEEECCCCCc
Confidence 44678899999999999999999999998765 3 33 45443 788899999999998643
No 75
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=95.74 E-value=0.014 Score=52.86 Aligned_cols=56 Identities=14% Similarity=0.061 Sum_probs=46.0
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
..+.+.|.+.+++.|++|+++++|++|..++ + . ..|.+. +| .+.||.||.|+....
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~---~--~-~~V~~~---~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTA---S--G-FRVTTS---AG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEET---T--E-EEEEET---TE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeC---C--E-EEEEEC---Cc-EEEeeEEEECCCCcc
Confidence 3688999999999999999999999998876 3 2 456553 55 899999999988654
No 76
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.74 E-value=0.016 Score=51.36 Aligned_cols=63 Identities=14% Similarity=0.163 Sum_probs=50.5
Q ss_pred hhHHHHHHHHHhC-CcEEEcCceeeEEEeccCCCCcceEE-EEEEeecCCCeEEEcCEEEEcCChhh-HhhcCC
Q 025358 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVK-GLAMSKATDKKVVQADAYVAACDVPG-IKRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~g~~~v~-gv~l~~~~~g~~~~aD~VV~a~p~~~-~~~Ll~ 118 (254)
.+.+.|.+.+++. |++|+++++|++|..++ + ++. .|++. +|++++||.||.|...+. +++.+.
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~---~--~v~g~v~~~---~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDE---R--HAIDQVRLN---DGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECT---T--SCEEEEEET---TSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC---C--ceEEEEEEC---CCCEEECCEEEECCCCChHHHHHhC
Confidence 5678888889888 99999999999999876 3 343 56664 788899999999998754 666664
No 77
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.73 E-value=0.016 Score=45.38 Aligned_cols=54 Identities=7% Similarity=-0.024 Sum_probs=43.9
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
..+.+.+.+.+++.|++++++ +|++|..+++ + ..+.+. +| ++++|.||.|+...
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~--~----~~v~~~---~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMGG--V----FEVETE---EG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECSS--S----EEEECS---SC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCC--E----EEEEEC---CC-EEEECEEEECCCCC
Confidence 467888999999999999999 9999987652 2 345553 66 89999999998864
No 78
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.73 E-value=0.018 Score=49.36 Aligned_cols=58 Identities=10% Similarity=-0.009 Sum_probs=45.2
Q ss_pred HHHHHHHHHhC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCC--CeEEEcCEEEEcCChhh
Q 025358 50 SGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATD--KKVVQADAYVAACDVPG 112 (254)
Q Consensus 50 ~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~--g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.+.+.+. |++|+++++|.+|..++ + ++.+|++.+..+ ++.+++|.||+++....
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~~---~--~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGDG---K--LLNALRIKNTKKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEESS---S--SEEEEEEEETTTTEEEEEECSEEEECSCEEE
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEccc---C--cEEEEEEEECCCCceEEEEeCEEEEEeCCCC
Confidence 46677777776 99999999999999876 4 578888863112 46789999999998643
No 79
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=95.69 E-value=0.019 Score=51.08 Aligned_cols=64 Identities=13% Similarity=0.151 Sum_probs=49.0
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChhh-HhhcCC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPG-IKRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~~-~~~Ll~ 118 (254)
.+.+.|.+.+++.|++|+.+++|++|..+++ + .+..+... +|+ ++.||.||.|..... +.+++.
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~--~--~~v~v~~~---~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGT--D--SVTTIEDI---NGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETT--E--EEEEEEET---TSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--E--EEEEEEcC---CCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 5678888999999999999999999998763 3 23334333 676 699999999998754 556654
No 80
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=95.68 E-value=0.023 Score=53.20 Aligned_cols=63 Identities=17% Similarity=0.361 Sum_probs=51.2
Q ss_pred hhHHHHHHHHHhC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh-H-hhcCC
Q 025358 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-I-KRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~-~-~~Ll~ 118 (254)
.+.+.|.+.+++. |++|+++ +|++|..+++ | ++.+|.+. +|+++.||.||.|..... + .+++.
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~--g--~~~~v~~~---~G~~i~ad~vI~A~G~~S~~~~~~lg 260 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDAN--G--NIESVRTA---TGRVFDADLFVDCSGFRGLLINKAME 260 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTT--S--CEEEEEET---TSCEEECSEEEECCGGGCCCCCCCTC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC--C--CEEEEEEC---CCCEEECCEEEECCCCchhhHHHHhC
Confidence 5788899999998 9999999 9999998653 5 67788775 788899999999999765 3 44544
No 81
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.68 E-value=0.019 Score=52.40 Aligned_cols=57 Identities=16% Similarity=0.088 Sum_probs=46.7
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEE-EeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLA-MSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~-l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.++++|++|+++++|++|..+++ + +..|. +. +|+ +++|.||+++...
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~---~~~v~~~~---~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADAD--G---RRVATTMK---HGE-IVADQVMLALGRM 267 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT--S---CEEEEESS---SCE-EEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC--C---EEEEEEcC---CCe-EEeCEEEEeeCcc
Confidence 346788999999999999999999999998753 3 34566 54 777 9999999999864
No 82
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.67 E-value=0.028 Score=51.74 Aligned_cols=63 Identities=14% Similarity=0.326 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh-H-hhcCC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-I-KRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~-~-~~Ll~ 118 (254)
.+.+.|.+.+++.|++++.+ +|++|..+++ | ++.+|.+. +|++++||.||.|...+. + .+++.
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~--~--~~~~v~~~---~g~~~~ad~vV~A~G~~S~~~~~~~g 238 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDER--G--WISGVHTK---QHGEISGDLFVDCTGFRGLLINQTLG 238 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTT--S--CEEEEEES---SSCEEECSEEEECCGGGCCCCCCCTC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCC--C--CEEEEEEC---CCCEEEcCEEEECCCcchHHHHHHhC
Confidence 57788899999999999999 9999998653 5 67788775 787899999999999865 3 34443
No 83
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=95.66 E-value=0.031 Score=51.70 Aligned_cols=64 Identities=14% Similarity=0.184 Sum_probs=51.9
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChhh-HhhcC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG-IKRLL 117 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~~-~~~Ll 117 (254)
.+.+.|.+.+++.|++|+.+++|++|..++ + ++.+|++.. .+| .+++||.||.|...+. +++.+
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~---~--~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEG---E--RAVGVRYRN-TEGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEET---T--EEEEEEEEC-SSSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEEC---C--EEEEEEEEe-CCCCEEEEEcCEEEECCCcchHHHHHc
Confidence 567788899999999999999999999876 5 688888752 246 3789999999999754 66555
No 84
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.66 E-value=0.031 Score=53.69 Aligned_cols=59 Identities=8% Similarity=-0.039 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
.+...|.+.+++.|++|+.+++|.+|..++ | ++.||.+.+..+|+ .+.||.||+|+...
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~---g--~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQD---G--KCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET---T--EEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecC---C--EEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 578889999999999999999999999865 6 78998775333565 48899999998853
No 85
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=95.63 E-value=0.029 Score=48.04 Aligned_cols=57 Identities=14% Similarity=0.169 Sum_probs=44.7
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+++.|++|+++++|++|..++ + ++.+|.+....+|+ .+++|.||.++...
T Consensus 193 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 193 ENAYVQEIKKRNIPYIMNAQVTEIVGDG---K--KVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp CHHHHHHHHHTTCCEECSEEEEEEEESS---S--SEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred CHHHHHHHhcCCcEEEcCCeEEEEecCC---c--eEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 3567888889999999999999998764 4 57788875322454 68999999998754
No 86
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.50 E-value=0.039 Score=52.07 Aligned_cols=61 Identities=21% Similarity=0.231 Sum_probs=48.7
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEee---cCC---------CeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATD---------KKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~---~~~---------g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.|.+.+++.|++|+++++|.+|..+++ | ++.||.+.+ +.+ |.++.||.||.|...+.
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~--g--~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHED--G--SVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTT--S--SEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC--C--CEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 4677889999999999999999999998763 5 688887741 012 36899999999998754
No 87
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=95.45 E-value=0.032 Score=49.32 Aligned_cols=54 Identities=17% Similarity=0.144 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.|.+.+++.|++|+++++|++|..++ + ++ .|.. ++.++.||.||.|+..+
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~---~--~v-~v~t----~~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDA---D--GV-SVTT----DRGTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET---T--EE-EEEE----SSCEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcC---C--eE-EEEE----CCCEEEcCEEEEcCCcC
Confidence 577889999999999999999999999875 3 33 2443 33479999999999875
No 88
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.45 E-value=0.028 Score=51.14 Aligned_cols=57 Identities=14% Similarity=0.192 Sum_probs=46.5
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
...+.+.+.+.++++|++|+++++|++|..+++ + ...|.+. +|+.+++|.||.++..
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~---~~~v~~~---~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 207 DPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD--G---SLTLELE---DGRSETVDCLIWAIGR 263 (450)
T ss_dssp CHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT--S---CEEEEET---TSCEEEESEEEECSCE
T ss_pred hHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC--c---EEEEEEC---CCcEEEcCEEEECCCC
Confidence 345788899999999999999999999987642 3 2456665 7888999999999875
No 89
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.32 E-value=0.035 Score=52.91 Aligned_cols=59 Identities=12% Similarity=0.065 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
.+...|.+.+++.|++|+.+++|.+|..++ | ++.||.+.+..+|+ .+.|++||+|+...
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~---g--~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 216 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMEN---G--ECRGVIALCIEDGTIHRFRAKNTVIATGGY 216 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEET---T--EEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEEC---C--EEEEEEEEEcCCCcEEEEEcCeEEECCCcc
Confidence 578889999999999999999999999875 6 79998875323564 68899999998854
No 90
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.26 E-value=0.028 Score=51.67 Aligned_cols=56 Identities=18% Similarity=0.216 Sum_probs=45.5
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
+..+.+.+.+.++++|++|+++++|++|..+ + ++..+.+ +|+++++|.||+++...
T Consensus 235 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~----~--~v~~v~~----~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 235 DRDLTDLMAKNMEEHGIQLAFGETVKEVAGN----G--KVEKIIT----DKNEYDVDMVILAVGFR 290 (490)
T ss_dssp CHHHHHHHHHHHHTTTCEEEETCCEEEEECS----S--SCCEEEE----SSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC----C--cEEEEEE----CCcEEECCEEEECCCCC
Confidence 3456788999999999999999999999853 3 4555655 67889999999999853
No 91
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=95.25 E-value=0.033 Score=47.18 Aligned_cols=55 Identities=13% Similarity=0.102 Sum_probs=43.0
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
+.+.+.+++.|++|+++++|.+|..++ + ++.+|++. ..+|+ ++++|.||.++...
T Consensus 187 ~~~~~~~~~~gv~~~~~~~v~~i~~~~---~--~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 187 STVEKVKKNEKIELITSASVDEVYGDK---M--GVAGVKVK-LKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHHHHHCTTEEEECSCEEEEEEEET---T--EEEEEEEE-CTTSCEEEECCSCEEECSCEE
T ss_pred HHHHHHHhcCCeEEEeCcEEEEEEcCC---C--cEEEEEEE-cCCCCeEEeecCeEEEEEcCC
Confidence 344555678999999999999998775 4 67888775 23564 78999999999864
No 92
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.18 E-value=0.043 Score=50.62 Aligned_cols=58 Identities=10% Similarity=0.013 Sum_probs=46.9
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeE-EEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKV-VQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~-~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.++++|++|+++++|++|..+++ + ...|.+. +|+. +++|.||.++...
T Consensus 216 d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~---~~~v~~~---~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 216 DESVINVLENDMKKNNINIVTFADVVEIKKVSD--K---NLSIHLS---DGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESST--T---CEEEEET---TSCEEEEESEEEECCCBC
T ss_pred chhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC--c---eEEEEEC---CCcEEEECCEEEECCCCC
Confidence 346788899999999999999999999987542 3 2456665 7877 9999999999853
No 93
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.13 E-value=0.081 Score=45.34 Aligned_cols=58 Identities=10% Similarity=-0.012 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+++.|++|+++++|++|..+ + ++.+|.+....+| +++++|.||.++...
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~----~--~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGD----E--RVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEES----S--SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccC----C--CeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 45677788888889999999999999874 3 4667877532245 678999999998864
No 94
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.10 E-value=0.046 Score=49.91 Aligned_cols=56 Identities=20% Similarity=0.211 Sum_probs=45.8
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe-EEEcCEEEEcCCh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK-VVQADAYVAACDV 110 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~-~~~aD~VV~a~p~ 110 (254)
...+.+.+.+.++++|++|+++++|++|..++ + . ..|.+. +|+ ++++|.||.++..
T Consensus 206 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~---~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 206 DPLLSATLAENMHAQGIETHLEFAVAALERDA---Q--G-TTLVAQ---DGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEESSCCEEEEEEET---T--E-EEEEET---TCCEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC---C--e-EEEEEe---CCcEEEEcCEEEECCCC
Confidence 34567888999999999999999999998764 2 2 456664 788 8999999999875
No 95
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=95.10 E-value=0.065 Score=47.27 Aligned_cols=64 Identities=8% Similarity=0.036 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEE-eecCCCe--EEEcCEEEEcCChhh-HhhcCCC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAM-SKATDKK--VVQADAYVAACDVPG-IKRLLPS 119 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l-~~~~~g~--~~~aD~VV~a~p~~~-~~~Ll~~ 119 (254)
.+.+.|.+.+++.|++|+++++|++|..+++ + ...|.+ . +|+ +++||.||.|...+. +++.+..
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~--~---~~~v~~~~---~g~~~~~~a~~vV~AdG~~S~vr~~l~~ 171 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQG--E---RPYVTFER---DGERLRLDCDYIAGCDGFHGISRQSIPA 171 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTS--S---SCEEEEEE---TTEEEEEECSEEEECCCTTCSTGGGSCG
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecC--C---ceEEEEec---CCcEEEEEeCEEEECCCCCcHHHHhcCc
Confidence 4667788888889999999999999987642 2 235666 4 776 789999999988764 6666653
No 96
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.08 E-value=0.058 Score=49.42 Aligned_cols=56 Identities=16% Similarity=0.077 Sum_probs=45.4
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.+++.|++|+++++|++|..+ + ++..+.+ ++.++++|.||.++...
T Consensus 226 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~----~--~v~~v~~----~~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 226 DGDMAEYIYKEADKHHIEILTNENVKAFKGN----E--RVEAVET----DKGTYKADLVLVSVGVK 281 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES----S--BEEEEEE----TTEEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC----C--cEEEEEE----CCCEEEcCEEEECcCCC
Confidence 3457788999999999999999999999764 3 4666655 45689999999999854
No 97
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=95.02 E-value=0.038 Score=48.13 Aligned_cols=58 Identities=10% Similarity=0.043 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|++|+++++|++|..++ + ++.+|.+. ..+| +.+++|.||.++...
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~---~--~v~~v~~~-~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESN---G--VLTRVHLR-SSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEET---T--EEEEEEEE-ETTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCC---C--ceEEEEEE-ecCCCeEEEeCCEEEECCCCC
Confidence 456778888899999999999999998765 4 67788774 1255 678999999998854
No 98
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.00 E-value=0.043 Score=49.77 Aligned_cols=56 Identities=11% Similarity=0.129 Sum_probs=45.6
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
..+.+.+.+.++++|++|+++++|++|..++ + + ..+.+. +|+.+++|.||.++...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~---~--~-v~v~~~---~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEA---K--G-ARVELE---GGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEET---T--E-EEEEET---TSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeC---C--E-EEEEEC---CCeEEEcCEEEECcCCC
Confidence 4577889999999999999999999998765 2 2 345553 68889999999999864
No 99
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.97 E-value=0.074 Score=45.07 Aligned_cols=56 Identities=13% Similarity=0.093 Sum_probs=43.1
Q ss_pred HHHHHHHHh-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
+.+.+.+++ .|++|+++++|++|..++ + ++.+|.+....+| ..+++|.||.++...
T Consensus 183 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 183 QVLQDKLRSLKNVDIILNAQTTEVKGDG---S--KVVGLEYRDRVSGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp HHHHHHHHTCTTEEEESSEEEEEEEESS---S--SEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHHhhCCCeEEecCCceEEEEcCC---C--cEEEEEEEECCCCcEEEEEcCEEEEeeCCc
Confidence 456777887 699999999999998664 4 6778888632235 368899999998753
No 100
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=94.97 E-value=0.054 Score=50.31 Aligned_cols=57 Identities=11% Similarity=0.370 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.|.+.+++.|++++.+ +|++|..+++ | .+.+|.+. +|+++.||.||.|...+.
T Consensus 166 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~--g--~~~~v~~~---~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 166 LVADFLKRWAVERGVNRVVD-EVVDVRLNNR--G--YISNLLTK---EGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTT--S--CEEEEEET---TSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEe-eEeEEEEcCC--C--cEEEEEEC---CCcEEEeCEEEECCCCch
Confidence 57788999999999999999 8999998653 5 56778775 777899999999999865
No 101
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=94.92 E-value=0.04 Score=49.89 Aligned_cols=56 Identities=18% Similarity=0.100 Sum_probs=45.1
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.+++.|++|+++++|++|..++ ++..+.+ +|+++++|.||.++...
T Consensus 190 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~------~v~~v~~----~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 190 DKEFTDVLTEEMEANNITIATGETVERYEGDG------RVQKVVT----DKNAYDADLVVVAVGVR 245 (447)
T ss_dssp CHHHHHHHHHHHHTTTEEEEESCCEEEEECSS------BCCEEEE----SSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEccC------cEEEEEE----CCCEEECCEEEECcCCC
Confidence 34577889999999999999999999998652 4555655 56789999999999853
No 102
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.90 E-value=0.067 Score=48.68 Aligned_cols=56 Identities=11% Similarity=0.028 Sum_probs=45.2
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.++++|++|+++++|++|..++ + ...|.+ +++++++|.||.++...
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~---~~~v~~----~~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD---G---EFVLTT----THGELRADKLLVATGRT 270 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEEET---T---EEEEEE----TTEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC---C---EEEEEE----CCcEEEcCEEEECCCCC
Confidence 34578889999999999999999999998654 3 345555 46689999999998864
No 103
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.88 E-value=0.052 Score=51.01 Aligned_cols=54 Identities=15% Similarity=0.203 Sum_probs=45.4
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
...+.+.+.+.++++|++|+++++|++|..++ + +|.+. +|+++++|.||+++..
T Consensus 227 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~-----~v~~~---~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 227 DYEMAAYVHEHMKNHDVELVFEDGVDALEENG---A-----VVRLK---SGSVIQTDMLILAIGV 280 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG---T-----EEEET---TSCEEECSEEEECSCE
T ss_pred CHHHHHHHHHHHHHcCCEEEECCeEEEEecCC---C-----EEEEC---CCCEEEcCEEEEccCC
Confidence 34678889999999999999999999997654 2 46665 7889999999999985
No 104
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.88 E-value=0.057 Score=48.39 Aligned_cols=52 Identities=15% Similarity=0.228 Sum_probs=43.7
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
...+.+.+.+.+++.|++|+++++|++|. + + +|++. +|+++++|.||.++..
T Consensus 186 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~---~-----~v~~~---~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 186 PATLADFVARYHAAQGVDLRFERSVTGSV--D---G-----VVLLD---DGTRIAADMVVVGIGV 237 (408)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEE--T---T-----EEEET---TSCEEECSEEEECSCE
T ss_pred CHHHHHHHHHHHHHcCcEEEeCCEEEEEE--C---C-----EEEEC---CCCEEEcCEEEECcCC
Confidence 34567888999999999999999999998 3 2 35665 7889999999999885
No 105
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.88 E-value=0.081 Score=48.19 Aligned_cols=59 Identities=14% Similarity=0.094 Sum_probs=45.7
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-eEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g-~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.+++.|++|+++++|++|..++ + + ..+.+.+ .+| +.+++|.||+++...
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~---~--~-~~v~~~~-~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVKN---K--Q-VTVKFVD-AEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEECS---S--C-EEEEEES-SSEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC---C--E-EEEEEEe-CCCcEEEECCEEEEeeCCc
Confidence 34678889999999999999999999998775 3 2 3455541 123 678999999999864
No 106
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.87 E-value=0.035 Score=49.55 Aligned_cols=52 Identities=10% Similarity=0.044 Sum_probs=43.5
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
+..+.+.+.+.++++|++++++++|++|.- + +|++. +|+++++|.||++++.
T Consensus 217 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~-----~-----~v~~~---~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 217 SPNSRKAVASIYNQLGIKLVHNFKIKEIRE-----H-----EIVDE---KGNTIPADITILLPPY 268 (409)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEECS-----S-----EEEET---TSCEEECSEEEEECCE
T ss_pred CHHHHHHHHHHHHHCCCEEEcCCceEEECC-----C-----eEEEC---CCCEEeeeEEEECCCC
Confidence 346788899999999999999999999952 1 36665 8889999999999885
No 107
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=94.85 E-value=0.06 Score=48.32 Aligned_cols=57 Identities=12% Similarity=0.036 Sum_probs=45.4
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEec----cCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYD----KAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~----~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
...+.+.+.+.+++.|++|+++++|++|..+ + + + ..|.+. +| .++||.||.|+....
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~---~--~-~~v~~~---~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK---V--R-FVLQVN---ST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS---C--C-EEEEET---TE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC---C--e-EEEEEC---CC-EEECCEEEECCCCcc
Confidence 4468899999999999999999999999976 3 2 2 345543 44 799999999997654
No 108
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=94.80 E-value=0.059 Score=51.13 Aligned_cols=59 Identities=17% Similarity=0.064 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHhCC-cEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
.+...|.+.+++.| ++|+.+++|.+|..++ + ++.||.+.+..+|+ .+.||.||+|+...
T Consensus 135 ~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~---g--~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 135 HMLHTLFQTSLQFPQIQRFDEHFVLDILVDD---G--HVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHHHHTTCTTEEEEETEEEEEEEEET---T--EEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC---C--EEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 57788999999999 9999999999999875 5 78898764323676 68999999998864
No 109
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.67 E-value=0.1 Score=47.54 Aligned_cols=61 Identities=11% Similarity=0.171 Sum_probs=46.3
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEee--cCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~--~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+.+++.|++|+++++|++|..++ + +...+.+.. +++|+++++|.||.++...
T Consensus 219 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~--~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 219 DMEISKNFQRILQKQGFKFKLNTKVTGATKKS---D--GKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEECT---T--SCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcC---C--ceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 34577889999999999999999999998765 2 223444321 2367789999999998853
No 110
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=94.52 E-value=0.096 Score=48.51 Aligned_cols=63 Identities=10% Similarity=0.134 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHh-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh-H-hhcCC
Q 025358 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-I-KRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~-~-~~Ll~ 118 (254)
.+.+.|.+.+++ .|++++.+ +|++|..+++ | .+.+|.+. +|++++||.||.|...+. + .+.+.
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~--g--~~~~v~~~---~g~~i~ad~vV~AdG~~S~~~~~~lg 241 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQH--G--DIEKLITK---QNGEISGQLFIDCTGAKSLLLGEHLQ 241 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTT--S--CEEEEEES---SSCEEECSEEEECSGGGCCCCCCCTC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCC--C--cEEEEEEC---CCCEEEcCEEEECCCcchHHHHHHhC
Confidence 567888899998 89999999 6999988753 5 56677775 666799999999999865 3 45554
No 111
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=94.43 E-value=0.021 Score=51.13 Aligned_cols=55 Identities=11% Similarity=0.109 Sum_probs=40.9
Q ss_pred hhHHHHHHHHHhCCcEEEcCceee---------EEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCR---------EILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~---------~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.|.+.+++.|++|+.+++|+ +|..++ + ++ +|.+. +| .+.||.||.|+..++
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~---~--~v-~v~~~---~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN---T--HQ-IVVHE---TR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------------CBC---CE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC---C--eE-EEEEC---Cc-EEECCEEEECCCccH
Confidence 478899999999999999999999 887765 3 34 56543 44 799999999998753
No 112
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=94.38 E-value=0.072 Score=49.31 Aligned_cols=57 Identities=12% Similarity=0.083 Sum_probs=42.5
Q ss_pred CcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC----eEEEcCEEEEcCCh
Q 025358 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK----KVVQADAYVAACDV 110 (254)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g----~~~~aD~VV~a~p~ 110 (254)
+++.+.+.+.+.|+++|++|++|++|+++.-+ + .+..+.. .+| +++++|.||.|+..
T Consensus 270 ~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~----~--~~~~~~~---~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 270 FEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK----Q--LLAKTKH---EDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp SCHHHHHHHHHHHHHTTCEEETTEEEEEECSS----E--EEEEEEC---TTSCEEEEEEECSEEEECCCE
T ss_pred CCHHHHHHHHHHHHhcceeeecCceEEEEeCC----c--eEEEEEe---cCcccceeeeccCEEEEccCC
Confidence 45678889999999999999999999998532 2 2222222 244 46899999999863
No 113
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=94.37 E-value=0.11 Score=44.00 Aligned_cols=59 Identities=14% Similarity=0.219 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHh-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeec------CC-----CeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKA------TD-----KKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~------~~-----g~~~~aD~VV~a~p~~ 111 (254)
.+...+.+.+.+ .|++|+++++|++|..++ + ++.+|.+... .+ ...++||.||.|+...
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~---~--~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG---N--RVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEET---T--EEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecC---C--eEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 456677777766 699999999999999876 4 6888877410 02 2678999999998853
No 114
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=94.36 E-value=0.1 Score=49.44 Aligned_cols=63 Identities=16% Similarity=0.119 Sum_probs=50.2
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChhh-HhhcC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG-IKRLL 117 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~~-~~~Ll 117 (254)
.+.+.|.+.+++.|++|+.+++|++|..++ + ++.+|.+.. +| .++.||.||.|..... +.+.+
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~---g--~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S~lr~~l 194 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSD---P--DRVVLTVRR--GGESVTVESDFVIDAGGSGGPISRKL 194 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCS---T--TCEEEEEEE--TTEEEEEEESEEEECCGGGCHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC---C--CEEEEEEec--CCceEEEEcCEEEECCCCcchhHHHc
Confidence 567788899999999999999999999874 3 467787753 55 5799999999998764 54443
No 115
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.34 E-value=0.087 Score=47.75 Aligned_cols=60 Identities=12% Similarity=0.072 Sum_probs=45.4
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.+++.|++|+++++|++|..++ + + ..+.+..+++|+.+++|.||.++...
T Consensus 210 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 210 EKQMAAIIKKRLKKKGVEVVTNALAKGAEERE---D--G-VTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEET---T--E-EEEEEEETTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC---C--e-EEEEEEeCCceeEEEcCEEEECcCCC
Confidence 34567888999999999999999999998664 3 2 33444322245679999999999864
No 116
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.33 E-value=0.055 Score=49.56 Aligned_cols=60 Identities=12% Similarity=-0.053 Sum_probs=46.0
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEee-cCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-ATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~-~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.++++|++|+++++|++|..++ + ...+.+.+ +.+|+.+++|.||.++...
T Consensus 225 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~---~---~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 225 DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE---D---GVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp CHHHHHHHHHHHGGGEEEEECSCEEEEEEEET---T---EEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC---C---eEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 34578889999999999999999999998764 2 24566651 0117788999999999853
No 117
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.19 E-value=0.13 Score=43.50 Aligned_cols=56 Identities=11% Similarity=0.062 Sum_probs=42.2
Q ss_pred HHHHHHHHh-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
..+.+.+.+ .|++|+++++|++|..++ + ++.+|.+....+|+ .+++|.||.++...
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKGDA---S--GVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEEET---T--EEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEECCC---C--cEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 456667764 799999999999998764 3 56678775322454 78999999998754
No 118
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.16 E-value=0.12 Score=47.18 Aligned_cols=60 Identities=17% Similarity=0.233 Sum_probs=45.8
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEe--ccCCCCcceEEEEEEee--cCCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILY--DKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~--~~~~~g~~~v~gv~l~~--~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.+++.|++|+++++|++|.. ++ +...+.+.+ +++|+.+++|.||.++...
T Consensus 223 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 223 DGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDK------NVVEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTT------TEEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCC------CeEEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 345778899999999999999999999987 33 234566542 1235679999999999853
No 119
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=94.13 E-value=0.085 Score=46.40 Aligned_cols=59 Identities=15% Similarity=0.081 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh-HhhcCC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~-~~~Ll~ 118 (254)
.+.+.|.+.+++.|++|+++++|++|.. + . .|++. +|++++||.||.|...+. +++.+.
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~------~--~v~~~---~g~~~~ad~vV~AdG~~s~vr~~l~ 167 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-V------G--RLTLQ---TGEVLEADLIVGADGVGSKVRDSIG 167 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-T------T--EEEET---TSCEEECSEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-C------C--EEEEC---CCCEEEcCEEEECCCccHHHHHHhc
Confidence 4678889999999999999999999976 3 2 35564 788899999999998754 665543
No 120
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=94.12 E-value=0.096 Score=50.04 Aligned_cols=56 Identities=11% Similarity=-0.008 Sum_probs=47.5
Q ss_pred hhHHHHHHHHHh-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.|.+.+++ .|++| ++++|+.|..++ + ++.||.+. +|+.+.||.||.|+....
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~---g--~V~GV~t~---dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKN---N--QVVGVRTN---LGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESS---S--BEEEEEET---TSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecC---C--EEEEEEEC---CCcEEEeCEEEEccCCCc
Confidence 467889999998 59999 578999999876 5 68899886 788999999999998653
No 121
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.11 E-value=0.084 Score=45.29 Aligned_cols=57 Identities=11% Similarity=-0.027 Sum_probs=44.9
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
+.+.+.+.+.+++.|++++++++|++|..++ + ++.+|.+. +| .+.+|.||.|+....
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~---~--~~~~v~~~---~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHFG---E--RLRVVARD---GR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEET---T--EEEEEETT---SC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEECC---C--cEEEEEeC---CC-EEEeCEEEECCCCCC
Confidence 3577888888999999999999999999876 3 33335543 55 899999999998644
No 122
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.06 E-value=0.06 Score=49.59 Aligned_cols=62 Identities=10% Similarity=0.029 Sum_probs=47.2
Q ss_pred ceeEEeCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 36 SLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 36 ~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...-+..++.. .+.+.++++|++|+++++|++|.-++ ++.++.+. +|+++++|.||+++...
T Consensus 251 ~~vvViGgG~~-----gle~~l~~~GV~v~~~~~v~~i~~~~------~v~~v~~~---~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 251 RKVAVTGSKAD-----EVIQELERWGIDYVHIPNVKRVEGNE------KVERVIDM---NNHEYKVDALIFADGRR 312 (493)
T ss_dssp SEEEEESTTHH-----HHHHHHHHHTCEEEECSSEEEEECSS------SCCEEEET---TCCEEECSEEEECCCEE
T ss_pred CEEEEECCCHH-----HHHHHHHhCCcEEEeCCeeEEEecCC------ceEEEEeC---CCeEEEeCEEEECCCcC
Confidence 34555665552 33388899999999999999998543 45667664 78899999999999853
No 123
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.03 E-value=0.064 Score=45.66 Aligned_cols=56 Identities=7% Similarity=0.108 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeec--CCCeEEEcCEEEEcCChh
Q 025358 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA--TDKKVVQADAYVAACDVP 111 (254)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~--~~g~~~~aD~VV~a~p~~ 111 (254)
.+...+.+++.|++++++++|++|..++ .+.+|.+.+. .+++++++|.||+++...
T Consensus 192 ~~~~~~~l~~~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 192 HEHSVENLHASKVNVLTPFVPAELIGED------KIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp CHHHHHHHHHSSCEEETTEEEEEEECSS------SCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred cHHHHHHHhcCCeEEEeCceeeEEecCC------ceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 3556677899999999999999998764 2456777631 124678999999998854
No 124
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.02 E-value=0.17 Score=46.30 Aligned_cols=60 Identities=12% Similarity=0.134 Sum_probs=45.8
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.+++.|++|+++++|++|..++ + . ..+.+....+| +.+++|.||+++...
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~---~--~-~~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG---D--G-AKVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET---T--E-EEEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC---C--E-EEEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 34578889999999999999999999998765 2 2 34555421124 689999999999853
No 125
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.98 E-value=0.16 Score=43.39 Aligned_cols=55 Identities=11% Similarity=0.009 Sum_probs=41.1
Q ss_pred HHHHHHHHh-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
..+.+.+.+ .|++|+++++|++|..+ + ++.+|.+....+|+ ++++|.||.++...
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~~----~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQGA----D--SVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEES----S--SEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred hHHHHHHHhcCCceEecCCceEEEccC----C--cEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 455666654 69999999999999864 3 57788875322454 78999999998753
No 126
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=93.97 E-value=0.14 Score=46.58 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=44.7
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.++++|++|+++++|++|..++ + + ..+.+. .+| +++++|.||.++...
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~--~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 211 DADVSKEIEKQFKKLGVTILTATKVESIADGG---S--Q-VTVTVT--KDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCEEEEEEECS---S--C-EEEEEE--SSSCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC---C--e-EEEEEE--cCCceEEEEcCEEEECCCCC
Confidence 34567889999999999999999999998765 2 2 235553 135 679999999998853
No 127
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.95 E-value=0.14 Score=46.48 Aligned_cols=60 Identities=12% Similarity=0.221 Sum_probs=45.4
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeec--CCCeEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA--TDKKVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~--~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.+++.|++|+++++|++|..++ + + ..+.+... ++++.+++|.||.++...
T Consensus 217 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 217 DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG---D--G-VKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp CHHHHHHHHHHHHHSSCCEECSEEEEEEECSS---S--S-EEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC---C--e-EEEEEEecCCCcceEEECCEEEECCCCC
Confidence 34577889999999999999999999998664 2 2 34555321 124789999999999864
No 128
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=93.87 E-value=0.16 Score=42.95 Aligned_cols=54 Identities=15% Similarity=0.110 Sum_probs=40.2
Q ss_pred HHHHHHHh-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 52 PIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 52 ~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+ .|++|+++++|++|..++ ++.+|++.+..+|+ .+++|.||+++...
T Consensus 194 ~~~~~~~~~~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 250 (323)
T 3f8d_A 194 IYVETVKKKPNVEFVLNSVVKEIKGDK------VVKQVVVENLKTGEIKELNVNGVFIEIGFD 250 (323)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEESS------SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEeccC------ceeEEEEEECCCCceEEEEcCEEEEEECCC
Confidence 44555555 499999999999998663 46778886322365 78999999998753
No 129
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=93.85 E-value=0.17 Score=46.73 Aligned_cols=62 Identities=6% Similarity=0.090 Sum_probs=48.6
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe---EEEcCEEEEcCChhh-HhhcCC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK---VVQADAYVAACDVPG-IKRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~---~~~aD~VV~a~p~~~-~~~Ll~ 118 (254)
.+.+.|.+.+++.|++|+++++|++|..+++ + +. |++. +|+ ++.||+||.|-..+. +++.+.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~--~---v~-v~~~---~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGD--H---VV-VEVE---GPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSS--C---EE-EEEE---CSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--E---EE-EEEE---cCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 4677888889999999999999999998763 3 43 6665 443 789999999988764 777664
No 130
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.82 E-value=0.17 Score=46.03 Aligned_cols=61 Identities=10% Similarity=0.037 Sum_probs=45.5
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCC----CeEEEcCEEEEcCCh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATD----KKVVQADAYVAACDV 110 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~----g~~~~aD~VV~a~p~ 110 (254)
...+.+.+.+.++++|++|+++++|++|..+++ + ....+.+.+..+ |+.+++|.||+++..
T Consensus 227 d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~--~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 227 DSMISTNCTEELENAGVEVLKFSQVKEVKKTLS--G--LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSS--S--EEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC--C--cEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 346788899999999999999999999987653 3 233455542111 267899999999985
No 131
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=93.79 E-value=0.11 Score=47.37 Aligned_cols=60 Identities=8% Similarity=-0.048 Sum_probs=45.3
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCCh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~ 110 (254)
...+.+.+.+.++++|++|+++++|++|...++ + + ..|.+.+..+| +.+++|.||+++..
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~--~-~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEKQDD--G--K-LLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTT--S--C-EEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--C--c-EEEEEecCCCCceeEEEcCEEEECccc
Confidence 345778899999999999999999999987652 4 2 34666532112 37899999999875
No 132
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.73 E-value=0.14 Score=47.64 Aligned_cols=56 Identities=21% Similarity=0.328 Sum_probs=44.4
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEec------------------cCCCCcceEEEEEEeecCCCeEEEcCEEEEcC
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYD------------------KAANAETYVKGLAMSKATDKKVVQADAYVAAC 108 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~------------------~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~ 108 (254)
..+.+.+.+.+++.|++|+++++|++|..+ .+ + ++ .+.+. +|+.+++|.||.++
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~v~~~---~g~~i~~D~vi~a~ 263 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK--G--HL-SLTLS---NGELLETDLLIMAI 263 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT--C--EE-EEEET---TSCEEEESEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC--C--cE-EEEEc---CCCEEEcCEEEECc
Confidence 456778889999999999999999999873 21 3 33 34454 78899999999999
Q ss_pred Ch
Q 025358 109 DV 110 (254)
Q Consensus 109 p~ 110 (254)
..
T Consensus 264 G~ 265 (565)
T 3ntd_A 264 GV 265 (565)
T ss_dssp CE
T ss_pred CC
Confidence 85
No 133
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=93.71 E-value=0.17 Score=46.74 Aligned_cols=62 Identities=11% Similarity=0.101 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC---eEEEcCEEEEcCChhh-HhhcCC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK---KVVQADAYVAACDVPG-IKRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g---~~~~aD~VV~a~p~~~-~~~Ll~ 118 (254)
.+.+.|.+.+++.|++|+++++|++|..++ + .+. |++. +| ++++||+||.|-..+. +++.+.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~---~--~v~-v~~~---~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDG---A--GVT-VEVR---GPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEET---T--EEE-EEEE---ETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcC---C--eEE-EEEE---cCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 467778888999999999999999999876 3 343 6565 33 3789999999988764 677664
No 134
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=93.69 E-value=0.083 Score=48.83 Aligned_cols=57 Identities=12% Similarity=0.059 Sum_probs=42.6
Q ss_pred HHHHHHHHhCC-cEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-----eEEEcCEEEEcCChh
Q 025358 51 GPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-----KVVQADAYVAACDVP 111 (254)
Q Consensus 51 ~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g-----~~~~aD~VV~a~p~~ 111 (254)
..+.+.++++| ++|++++.|++|.++++ ++ +++||++.. .+| .++.|+.||+|+..-
T Consensus 225 ~~~l~~a~~~~n~~i~~~~~V~~i~~~~~-g~--~~~gV~~~~-~~g~~~~~~~v~A~~VIlaaG~~ 287 (504)
T 1n4w_A 225 KTYLAAALGTGKVTIQTLHQVKTIRQTKD-GG--YALTVEQKD-TDGKLLATKEISCRYLFLGAGSL 287 (504)
T ss_dssp TTHHHHHHHTTSEEEEESEEEEEEEECTT-SS--EEEEEEEEC-TTCCEEEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCC-CC--EEEEEEEeC-CCCccceeEEEeeCEEEEccCCC
Confidence 34445556676 89999999999999852 13 789998852 245 468899999999864
No 135
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.67 E-value=0.13 Score=46.62 Aligned_cols=52 Identities=15% Similarity=0.193 Sum_probs=43.7
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
...+.+.+.+.++++|++++++++|+++. + . .+.+. +|+++++|.||.++..
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~--~---~-----~v~~~---~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAIN--G---N-----EITFK---SGKVEHYDMIIEGVGT 238 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEE--T---T-----EEEET---TSCEEECSEEEECCCE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEec--C---C-----eeeec---CCeEEeeeeEEEEece
Confidence 34678999999999999999999999984 2 1 35665 8999999999999885
No 136
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=93.64 E-value=0.11 Score=49.72 Aligned_cols=56 Identities=11% Similarity=0.086 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHh-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.|.+.+++ .|++| ++++|+.|..++ + ++.+|.+. +|..+.||.||.|+....
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~---g--~V~GV~t~---dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVEN---D--RVVGAVTQ---MGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESS---S--BEEEEEET---TSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecC---C--EEEEEEEC---CCCEEECCEEEEcCCCCc
Confidence 467888999998 69999 678999999876 4 68899886 788899999999998754
No 137
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=93.50 E-value=0.21 Score=45.45 Aligned_cols=56 Identities=13% Similarity=0.046 Sum_probs=44.1
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCC--Ce--EEEcCEEEEcCCh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATD--KK--VVQADAYVAACDV 110 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~--g~--~~~aD~VV~a~p~ 110 (254)
..+.+.+.+.+++.|++|+++++|++|..++ + + ..+.+.. + |+ ++++|.||.++..
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~---~--~-~~v~~~~--~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKKK---D--G-LHVRLEP--AEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET---T--E-EEEEEEE--TTCCSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC---C--E-EEEEEee--cCCCceeEEEcCEEEECCCc
Confidence 4567888999999999999999999998765 3 2 3455532 3 65 8999999999875
No 138
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=93.49 E-value=0.17 Score=46.76 Aligned_cols=67 Identities=12% Similarity=0.052 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEE--EEEeecCCCeEEEcCEEEEcCChhh-HhhcCC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKG--LAMSKATDKKVVQADAYVAACDVPG-IKRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~g--v~l~~~~~g~~~~aD~VV~a~p~~~-~~~Ll~ 118 (254)
.+.+.|.+.+++.|++|+++++|++|..+++ + ++.+ +++.+..++.++.||.||.|...+. +++.+.
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~--~--~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lg 190 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDD--D--AGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLG 190 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECG--G--GCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCC--C--ccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcC
Confidence 5678899999999999999999999998762 2 2233 3343110126899999999988764 666663
No 139
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=93.37 E-value=0.25 Score=45.18 Aligned_cols=61 Identities=13% Similarity=0.010 Sum_probs=45.5
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.++++|++|+++++|++|...++ + . ..+.+.+..+|+ .+++|.||.++...
T Consensus 224 d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~--~--~-~~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 224 DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT--N--Q-LQVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEECTT--S--C-EEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC--C--c-EEEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 346788899999999999999999999987542 3 2 345554322355 47899999998853
No 140
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=93.26 E-value=0.13 Score=47.92 Aligned_cols=61 Identities=13% Similarity=0.036 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHh-CCcEEEcCceeeEEEeccCCC-----CcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAAN-----AETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~-----g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
.+.+.|.+.+++ .|++|+.+++|.+|..+++ + + ++.||.+.+..+|+ .+.||.||+|+...
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-g~~~~~~--~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDK-IGLPGTR--RVVGAWVWNRNKETVETCHAKAVVLATGGA 207 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGG-TTCCSSC--BEEEEEEEETTTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-CCcccCC--EEEEEEEEEcCCCcEEEEEcCeEEECCCCc
Confidence 466777888888 7999999999999998432 1 2 57888875323565 68899999998854
No 141
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=93.24 E-value=0.18 Score=43.76 Aligned_cols=65 Identities=12% Similarity=0.153 Sum_probs=49.6
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh-HhhcC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLL 117 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~-~~~Ll 117 (254)
.+.+.|.+..++.|++++++++|..+..++ + ++.++....++++.++.||.||-|-..+. +++.+
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~---~--~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~ 168 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN---G--KVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET---T--EEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeecc---c--eeeeeeecccccceEEEEeEEEeCCccccHHHHHc
Confidence 456778888899999999999999999886 5 67777665322334688999999988754 55544
No 142
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=93.04 E-value=0.13 Score=46.28 Aligned_cols=52 Identities=8% Similarity=0.023 Sum_probs=39.7
Q ss_pred hHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEee-cCCCeEEEcCEEEEcCCh
Q 025358 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-ATDKKVVQADAYVAACDV 110 (254)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~-~~~g~~~~aD~VV~a~p~ 110 (254)
+.+.+.+.++++|++|+++++|++|.-+ ++++.. +.+|+++++|.||.+++.
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~~----------~v~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEPD----------KVIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECSS----------EEEEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeCC----------eEEEEecCCCceEEeeeEEEECCCC
Confidence 5778899999999999999999999532 244441 113788999999998653
No 143
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=93.01 E-value=0.26 Score=42.09 Aligned_cols=58 Identities=9% Similarity=0.030 Sum_probs=41.5
Q ss_pred HHHH-HHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 51 GPIR-KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 51 ~~l~-~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
+.+. +.+++.|++|+++++|++|..+++ + .++.+|.+....+| +++++|.||.++...
T Consensus 198 ~~~~~~~~~~~gv~i~~~~~v~~i~~~~~--~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 198 KIMQQRALSNPKIDVIWNSSVVEAYGDGE--R-DVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESSS--S-SSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHHHhCCCeeEecCCceEEEeCCCC--c-cceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 4455 445789999999999999987641 1 03566777532234 678999999998864
No 144
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=92.92 E-value=0.28 Score=44.51 Aligned_cols=59 Identities=8% Similarity=0.056 Sum_probs=44.0
Q ss_pred cchhHHHHHHHH-HhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYI-TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l-~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.+ +++|++|+++++|++|..++ + + ..+.+.. .+| +.+++|.||.++...
T Consensus 214 d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~~-~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 214 DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNG---D--S-VSLEVEG-KNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECS---S--S-EEEEEEC-C---EEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC---C--e-EEEEEEc-CCCceEEEECCEEEECCCcc
Confidence 345678899999 99999999999999998765 2 2 3455431 135 679999999998853
No 145
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=92.90 E-value=0.17 Score=46.30 Aligned_cols=57 Identities=19% Similarity=0.071 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.|.+.+++.|++|+.+++| +|..++ + ++.|+.+.. ++..+.||.||+|+....
T Consensus 120 ~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~---~--~v~Gv~v~~--~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 120 EIFNFLLKLAREEGIPIIEDRLV-EIRVKD---G--KVTGFVTEK--RGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHTTCCEECCCEE-EEEEET---T--EEEEEEETT--TEEECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEECcEE-EEEEeC---C--EEEEEEEEe--CCCeEEeeeEEECCCCCc
Confidence 56788888888899999999999 998875 5 788887641 223477999999988643
No 146
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=92.85 E-value=0.17 Score=46.71 Aligned_cols=57 Identities=14% Similarity=0.055 Sum_probs=41.7
Q ss_pred HHHHHHHHhCC-cEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-----eEEEcCEEEEcCChh
Q 025358 51 GPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-----KVVQADAYVAACDVP 111 (254)
Q Consensus 51 ~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g-----~~~~aD~VV~a~p~~ 111 (254)
..+.+..+++| ++|++++.|++|..+++ |+ +++||++.. .+| .++.|+.||+++..-
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~--g~-~~~gV~~~~-~~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATG--SG-YSVTMEQID-EQGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSS--SS-EEEEEEEEC-TTSCEEEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCC--CC-EEEEEEEeC-CCCcccccEEEEeCEEEEccCcc
Confidence 34444455565 99999999999999862 31 689998852 134 367899999999864
No 147
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=92.62 E-value=0.1 Score=49.03 Aligned_cols=64 Identities=14% Similarity=0.100 Sum_probs=49.2
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-eEEEcCEEEEcCChh-hHhhcCC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDVP-GIKRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g-~~~~aD~VV~a~p~~-~~~~Ll~ 118 (254)
.+.+.|.+.+++.|++|+++++|++|..+++ + + .|++.. .+| ++++||.||.|...+ .+++++.
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~--~---v-~v~~~~-~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAE--A---V-EVTVAG-PSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSS--C---E-EEEEEE-TTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--e---E-EEEEEe-CCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 4677888889989999999999999988763 3 3 355521 267 689999999998875 4666664
No 148
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=92.61 E-value=0.17 Score=48.62 Aligned_cols=56 Identities=11% Similarity=0.042 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.++++|++|+++++|++|..++ ..+....+++++++++|.||+++...
T Consensus 568 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--------~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 568 FEVNRIQRRLIENGVARVTDHAVVAVGAGG--------VTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp TCHHHHHHHHHHTTCEEEESEEEEEEETTE--------EEEEETTTCCEEEEECSEEEEESCEE
T ss_pred hhHHHHHHHHHHCCCEEEcCcEEEEEECCe--------EEEEEccCCeEEEEECCEEEECCCCC
Confidence 346788999999999999999999997432 12322112356789999999998864
No 149
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=92.39 E-value=0.32 Score=46.40 Aligned_cols=62 Identities=21% Similarity=0.080 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHhC-Cc-EEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDK-GG-RFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~-Gg-~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
.+...+.+.+++. |+ +|+.+++|.+|..+++..| ++.||...+..+|+ .+.|+.||+|+...
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g--~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPN--AVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTT--BEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccc--eeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 4677888888888 99 9999999999998651003 68898763222454 68899999998853
No 150
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.27 E-value=0.13 Score=45.31 Aligned_cols=51 Identities=20% Similarity=0.281 Sum_probs=41.9
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
...+.+.+.+.++++|++|+++++|++|. . . +|++. +|+ +++|.||.++..
T Consensus 182 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~---~-----~v~~~---~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 182 DEELSNMIKDMLEETGVKFFLNSELLEAN--E---E-----GVLTN---SGF-IEGKVKICAIGI 232 (367)
T ss_dssp CHHHHHHHHHHHHHTTEEEECSCCEEEEC--S---S-----EEEET---TEE-EECSCEEEECCE
T ss_pred CHHHHHHHHHHHHHCCCEEEcCCEEEEEE--e---e-----EEEEC---CCE-EEcCEEEECcCC
Confidence 34567888999999999999999999996 2 2 36665 777 999999999874
No 151
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.06 E-value=0.32 Score=40.97 Aligned_cols=58 Identities=9% Similarity=0.126 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|++++.+++|..|..+.+ ++ ....|.+. +|+.+.+|.+|.|+...
T Consensus 57 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~-~~--~~~~v~~~---~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 57 KLAGALKVHVDEYDVDVIDSQSASKLIPAAV-EG--GLHQIETA---SGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSS-TT--CCEEEEET---TSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCeEEccCEEEEEEeccc-CC--ceEEEEEC---CCCEEEeCEEEECcCCC
Confidence 4677888888999999999999999986531 11 13456564 77789999999998864
No 152
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=91.91 E-value=0.27 Score=43.49 Aligned_cols=49 Identities=18% Similarity=0.193 Sum_probs=38.3
Q ss_pred CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh-HhhcC
Q 025358 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLL 117 (254)
Q Consensus 60 ~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~-~~~Ll 117 (254)
.|++|+++++|++|..+++ + + .|.+. +|+++.||.||.|...+. +++++
T Consensus 110 ~~~~i~~~~~v~~i~~~~~--~---v-~v~~~---~g~~~~ad~vV~AdG~~S~vr~~~ 159 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSE--T---V-QMRFS---DGTKAEANWVIGADGGASVVRKRL 159 (397)
T ss_dssp CSTTEETTCCEEEEEECSS--C---E-EEEET---TSCEEEESEEEECCCTTCHHHHHH
T ss_pred CCcEEEcCCEEEEEEecCC--E---E-EEEEC---CCCEEECCEEEECCCcchhHHHHh
Confidence 4899999999999998762 3 3 36564 788899999999988754 55544
No 153
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=91.73 E-value=0.28 Score=47.05 Aligned_cols=61 Identities=18% Similarity=0.172 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHhC--CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCCh
Q 025358 48 YLSGPIRKYITDK--GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (254)
Q Consensus 48 ~l~~~l~~~l~~~--Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~ 110 (254)
.+...|.+.+++. |++|+.++.|.+|..+++.+| ++.||...+..+|+ .+.|++||+|+.-
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g--~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPN--RIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTT--BEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccc--eEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 5678888999888 999999999999998751014 68998764322443 5889999999884
No 154
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=91.71 E-value=0.21 Score=46.07 Aligned_cols=62 Identities=10% Similarity=-0.099 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~~ 112 (254)
.+.+.|.+.+++.|++|+++++|.+|..+++ ++ ...+|.+....+| +++.||.||.|+....
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~~--~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPR-KG--SGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCS-TT--CCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecC-CC--CEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 4667888889999999999999999987521 12 2356666311145 4789999999998765
No 155
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=91.49 E-value=0.25 Score=42.42 Aligned_cols=54 Identities=13% Similarity=0.076 Sum_probs=39.4
Q ss_pred HHH-HHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 52 PIR-KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 52 ~l~-~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
.+. +.+++.|++++++++|++|..++ ++.+|.+....+| +.+++|.||.++...
T Consensus 195 ~~~~~~~~~~gV~v~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 195 IMLDRARNNDKIRFLTNHTVVAVDGDT------TVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp THHHHHHHCTTEEEECSEEEEEEECSS------SCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred HHHHHHhccCCcEEEeCceeEEEecCC------cEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 344 44577999999999999998653 3556776532234 678999999998864
No 156
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=91.48 E-value=0.38 Score=41.64 Aligned_cols=56 Identities=9% Similarity=-0.064 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|++++++++|.+|..+++ + ...|.+. +|+.+.+|++|.|+...
T Consensus 75 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~---~~~v~~~---~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 75 DLVESLWAQAERYNPDVVLNETVTKYTKLDD--G---TFETRTN---TGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHHTTCCEEECSCCEEEEEECTT--S---CEEEEET---TSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHhCCEEEcCCEEEEEEECCC--c---eEEEEEC---CCcEEEeeEEEEccCCC
Confidence 5677888888999999999999999998752 2 2345554 77789999999998763
No 157
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=91.47 E-value=0.42 Score=41.29 Aligned_cols=55 Identities=13% Similarity=-0.044 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+.+.+.+.+++.|++|+++++|.+|..+++ + ..|.+. +| .+.+|+||+|+....
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~--~----~~v~~~---~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDA--Y----YTIATT---TE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSS--S----EEEEES---SC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCC--e----EEEEeC---CC-EEEeCEEEECCCCCC
Confidence 3566777888899999999999999998752 3 335443 45 689999999988653
No 158
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=91.43 E-value=0.25 Score=45.96 Aligned_cols=56 Identities=7% Similarity=0.051 Sum_probs=41.6
Q ss_pred HHHHHHHh-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EE---EcCEEEEcCChhh
Q 025358 52 PIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VV---QADAYVAACDVPG 112 (254)
Q Consensus 52 ~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~---~aD~VV~a~p~~~ 112 (254)
.+.+.+++ .|++|++++.|++|..++ + +++||++....+|+ ++ .++.||+++....
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~---~--~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNG---S--QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEET---T--EEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeC---C--EEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 35555555 589999999999999976 5 79999986311353 33 7899999998743
No 159
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.29 E-value=0.44 Score=44.53 Aligned_cols=56 Identities=16% Similarity=0.081 Sum_probs=46.1
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
.+.+.+.+.+.++++|++|++++.|+++...+ + + ..|.+. ++..+.+|.|+.|+.-
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~---~--~-~~v~~~---~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD---D--K-ILVEFS---DKTSELYDTVLYAIGR 317 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEET---T--E-EEEEET---TSCEEEESEEEECSCE
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEecC---C--e-EEEEEc---CCCeEEEEEEEEcccc
Confidence 34678899999999999999999999999876 3 2 335554 7778899999999884
No 160
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=91.26 E-value=0.62 Score=41.89 Aligned_cols=46 Identities=17% Similarity=0.038 Sum_probs=34.8
Q ss_pred CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 60 ~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
.|++|+++++|+++..++ + ...+.+....+|+ ++++|.||+++...
T Consensus 329 ~~v~i~~~~~v~~v~~~~---~---~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATA---Q---GIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEET---T---EEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecC---C---EEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 699999999999998765 3 2456665333455 48999999999864
No 161
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=91.23 E-value=0.33 Score=45.42 Aligned_cols=57 Identities=9% Similarity=-0.039 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHhCCc--EEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|. +++++++|+++..+++ + ..+.|.+. +|+++.||.||+|+...
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~--~--~~w~V~~~---~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEE--G--LRWTVRTD---RGDEVSARFLVVAAGPL 158 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETT--T--TEEEEEET---TCCEEEEEEEEECCCSE
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCC--C--CEEEEEEC---CCCEEEeCEEEECcCCC
Confidence 466778888888897 8999999999998763 3 34556665 78889999999999853
No 162
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=91.22 E-value=0.31 Score=46.53 Aligned_cols=55 Identities=13% Similarity=0.133 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHhC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.|.+.+++. |++|+ +.+|..|..++ + ++.||.+. +|+.+.||.||.|+...
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~---g--~V~GV~t~---~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANS---G--KFSSVTVR---SGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET---T--EEEEEEET---TSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecC---C--EEEEEEEC---CCcEEEeCEEEECcCCC
Confidence 5678888999885 99995 56999998876 4 78888875 78899999999998864
No 163
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=91.18 E-value=0.34 Score=45.23 Aligned_cols=57 Identities=12% Similarity=0.069 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHhCCc--EEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|+ +|+++++|+++..+++ + +.+.|.+. +|+++.||.||+|+...
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~--~--~~~~V~~~---~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDD--E--NLWEVTTD---HGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETT--T--TEEEEEET---TSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCC--C--CEEEEEEc---CCCEEEeCEEEECCccc
Confidence 466778888888998 8999999999998763 3 34556665 78889999999999853
No 164
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.14 E-value=0.3 Score=41.42 Aligned_cols=55 Identities=7% Similarity=0.058 Sum_probs=44.2
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
+.+.+.+.+.+++.|++++++++|.+|..+++ + .+.|.+. +|+ +.+|+||.|+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~---~~~v~~~---~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQAD--G---VFKLVTN---EET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTT--S---CEEEEES---SEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCC--C---cEEEEEC---CCE-EEeCEEEECCCC
Confidence 35778888888889999999999999998762 2 3456664 555 899999999887
No 165
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=91.08 E-value=0.3 Score=40.70 Aligned_cols=51 Identities=12% Similarity=0.121 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|++|+. ++|++|..+ . +|.+. +|+.+++|.||+++...
T Consensus 175 ~~~~~~~~~l~~~gv~i~~-~~v~~i~~~-------~--~v~~~---~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 175 EPDADQHALLAARGVRVET-TRIREIAGH-------A--DVVLA---DGRSIALAGLFTQPKLR 225 (297)
T ss_dssp CCCHHHHHHHHHTTCEEEC-SCEEEEETT-------E--EEEET---TSCEEEESEEEECCEEE
T ss_pred CCCHHHHHHHHHCCcEEEc-ceeeeeecC-------C--eEEeC---CCCEEEEEEEEEccCcc
Confidence 4678889999999999995 999998632 2 46675 88899999999998753
No 166
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=91.07 E-value=0.23 Score=37.52 Aligned_cols=52 Identities=10% Similarity=0.043 Sum_probs=37.9
Q ss_pred CeEEEcCEEEEcCChhhHhhcC--CCcccCchhHHHhhcCCCCcEEEEEEEecCcc
Q 025358 96 KKVVQADAYVAACDVPGIKRLL--PSSWREMKFFNNIYALVGVPVVTVQLRYNGWV 149 (254)
Q Consensus 96 g~~~~aD~VV~a~p~~~~~~Ll--~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~ 149 (254)
.++++||+||+|+|+..++++- |+ .+....+.+.++...+..-+.+.|+++.
T Consensus 3 ~~~~~Ad~VIvTvP~~vL~~I~F~P~--LP~~k~~Ai~~l~~g~~~Kv~l~f~~~F 56 (130)
T 2e1m_B 3 TQTWTGDLAIVTIPFSSLRFVKVTPP--FSYKKRRAVIETHYDQATKVLLEFSRRW 56 (130)
T ss_dssp CEEEEESEEEECSCHHHHTTSEEESC--CCHHHHHHHHHCCEECEEEEEEEESSCG
T ss_pred ceEEEcCEEEEcCCHHHHhcCcCCCC--CCHHHHHHHHhCCCcceeEEEEEECCCC
Confidence 3468899999999999988742 22 2222345567777778889999999865
No 167
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=91.02 E-value=0.4 Score=42.57 Aligned_cols=51 Identities=4% Similarity=-0.044 Sum_probs=41.5
Q ss_pred hHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
+.....+++++.|++++++++|++|..++ + .|++. +|+.+.+|++|+|+..
T Consensus 64 l~~~~~~~~~~~~i~~~~~~~V~~id~~~---~-----~v~~~---~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 64 ILIKKNDWYEKNNIKVITSEFATSIDPNN---K-----LVTLK---SGEKIKYEKLIIASGS 114 (385)
T ss_dssp TBSSCHHHHHHTTCEEECSCCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCE
T ss_pred ccCCCHHHHHHCCCEEEeCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEEecCC
Confidence 34456677889999999999999998775 2 35565 7889999999999885
No 168
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=91.01 E-value=0.068 Score=47.37 Aligned_cols=46 Identities=11% Similarity=-0.110 Sum_probs=37.5
Q ss_pred HHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
.++++|+++++++++..+..+++ + ..+.+. +|+++++|.+|.+++.
T Consensus 211 ~l~~~gi~v~~~~~v~~v~~~~~--~----~~v~~~---~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 211 GTENALIEWHPGPDAAVVKTDTE--A----MTVETS---FGETFKAAVINLIPPQ 256 (401)
T ss_dssp TSTTCSEEEECTTTTCEEEEETT--T----TEEEET---TSCEEECSEEEECCCE
T ss_pred HHHhcCcEEEeCceEEEEEeccc--c----eEEEcC---CCcEEEeeEEEEecCc
Confidence 35688999999999999988762 2 346665 8999999999999874
No 169
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=90.92 E-value=0.53 Score=43.53 Aligned_cols=55 Identities=15% Similarity=0.107 Sum_probs=42.6
Q ss_pred HHHHHHHHh-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCCh
Q 025358 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (254)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~ 110 (254)
+.+.+.+++ .|++|+++++|++|.-++ + ++.++.+....+|+ .+++|.||.++..
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKGDG---S--KVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEECS---S--SEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEcCC---C--cEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 456778887 599999999999998654 4 67788876322353 6889999999874
No 170
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=90.69 E-value=0.3 Score=43.20 Aligned_cols=59 Identities=14% Similarity=0.093 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh-HhhcC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLL 117 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~-~~~Ll 117 (254)
.+.+.|.+.+++ ++|+++++|++|..++ + .+ .|++. +|+++.||.||.|...+. +++.+
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~---~--~v-~v~~~---~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDA---D--GV-TVWFT---DGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEET---T--EE-EEEET---TSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecC---C--cE-EEEEc---CCCEEeeCEEEECCCcChHHHHHh
Confidence 456677777766 8999999999999876 3 23 35554 788999999999988754 55544
No 171
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.66 E-value=0.33 Score=44.01 Aligned_cols=55 Identities=16% Similarity=0.102 Sum_probs=42.3
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.+++.|++|+++++|++|.. + + ..+.. .+| +.+++|.||.++...
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~------~-v~v~~---~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 211 DSELTAPVAESLKKLGIALHLGHSVEGYEN-G------C-LLAND---GKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEETTCEEEEEET-T------E-EEEEC---SSSCCCEECCSCEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C------C-EEEEE---CCCceEEEECCEEEECcCCC
Confidence 345678889999999999999999999975 3 3 22321 245 689999999999853
No 172
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.65 E-value=0.53 Score=42.83 Aligned_cols=60 Identities=13% Similarity=0.124 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHhCCcE--EEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGR--FHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~--i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+++++.|++ |+++++|.+|...++ + ..+.|++.+..+| +++.+|+||.|+...
T Consensus 102 ~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~--~--~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~ 165 (464)
T 2xve_A 102 VLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNED--S--QTFTVTVQDHTTDTIYSEEFDYVVCCTGHF 165 (464)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSEEEEEEEEETT--T--TEEEEEEEETTTTEEEEEEESEEEECCCSS
T ss_pred HHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCC--C--CcEEEEEEEcCCCceEEEEcCEEEECCCCC
Confidence 4667788888888998 999999999998652 2 1345666521234 578899999999853
No 173
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=90.53 E-value=0.21 Score=45.01 Aligned_cols=53 Identities=6% Similarity=-0.029 Sum_probs=39.1
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEee-cCCCeEEEcCEEEEcCCh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-ATDKKVVQADAYVAACDV 110 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~-~~~g~~~~aD~VV~a~p~ 110 (254)
...+.+.+.++++|+++++|+.|++++- + + +.+.. +++++++++|.+|.+++.
T Consensus 201 ~~~~~l~~~l~~~GV~~~~~~~v~~v~~-----~--~---~~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEP-----D--K---VIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECS-----S--E---EEEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHhCCeEEEeCceEEEEeC-----C--c---eEEEeeCCCceEeecceEEEeccC
Confidence 4456788899999999999999999852 2 2 33331 123568999999999874
No 174
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.51 E-value=0.47 Score=40.44 Aligned_cols=55 Identities=13% Similarity=0.060 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|++++++++|.+|..++ + ...|.+. +|+.+.+|.||.|+...
T Consensus 66 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~---~---~~~v~~~---~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 66 DLVKGLVEQVAPFNPVYSLGERAETLEREG---D---LFKVTTS---QGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHGGGCCEEEESCCEEEEEEET---T---EEEEEET---TSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEECC---C---EEEEEEC---CCCEEEeCEEEECCCCC
Confidence 467778888888899999999999998775 2 2335553 67789999999998863
No 175
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=90.37 E-value=0.31 Score=46.31 Aligned_cols=50 Identities=14% Similarity=0.250 Sum_probs=38.8
Q ss_pred CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChhh
Q 025358 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPG 112 (254)
Q Consensus 60 ~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~~ 112 (254)
.|++|++++.|++|..+++ ++ +++||++.+..+|+ ++.||.||+++....
T Consensus 273 ~nv~v~~~~~V~~i~~~~~-~~--~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~ 324 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNAL-NS--EIESLHIHDLISGDRFEIKADVYVLTAGAVH 324 (623)
T ss_dssp EEEEEECSEEEEEEEECTT-SS--CEEEEEEEETTTCCEEEECEEEEEECSCTTH
T ss_pred CCEEEEeCCEEEEEEEECC-CC--EEEEEEEEEcCCCcEEEEECCEEEEcCCCcC
Confidence 3899999999999998752 23 78999987422454 678999999998643
No 176
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=90.35 E-value=0.39 Score=41.53 Aligned_cols=55 Identities=9% Similarity=0.213 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHhCC-cEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEE-cCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQ-ADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~-aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.| ++++++++|.+|..++ + ...|.+. +|+.+. +|.||.++...
T Consensus 215 ~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~---~---~~~v~~~---~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 215 YTRQRLGNVIKQGARIEMNVHYTVKDIDFNN---G---QYHISFD---SGQSVHTPHEPILATGFD 271 (369)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCCEEEEEEET---T---EEEEEES---SSCCEEESSCCEECCCBC
T ss_pred HHHHHHHHHHhhCCcEEEecCcEEEEEEecC---C---ceEEEec---CCeEeccCCceEEeeccC
Confidence 44578888889997 9999999999997654 2 2356665 776665 69999998753
No 177
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=90.26 E-value=0.49 Score=42.64 Aligned_cols=55 Identities=13% Similarity=0.103 Sum_probs=43.5
Q ss_pred CcchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
+...+.+.+.+.++++ ++++++++|.+|..++ ++..+. . +|+++++|.||.++..
T Consensus 188 ~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~------~v~~v~-~---~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 188 FDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE------RVEKVV-T---DAGEYKAELVILATGI 242 (449)
T ss_dssp SCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS------SCCEEE-E---TTEEEECSEEEECSCE
T ss_pred cCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC------cEEEEE-e---CCCEEECCEEEEeeCC
Confidence 3446678888999999 9999999999997543 344443 3 7889999999999885
No 178
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.47 E-value=0.66 Score=42.86 Aligned_cols=58 Identities=10% Similarity=0.145 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|++++.+++|.+|..+.+ ++ ....|.+. +|+.+.+|.||.|+...
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~-~~--~~~~V~~~---~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAAT-EG--GLHQIETA---SGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSS-TT--SCEEEEET---TSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccC-CC--ceEEEEEC---CCCEEEcCEEEECCCCC
Confidence 4677888899999999999999999986421 11 13456664 78889999999999864
No 179
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=89.40 E-value=0.55 Score=42.17 Aligned_cols=51 Identities=8% Similarity=0.047 Sum_probs=38.1
Q ss_pred hHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEee-cCC-----CeEEEcCEEEEcCC
Q 025358 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-ATD-----KKVVQADAYVAACD 109 (254)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~-~~~-----g~~~~aD~VV~a~p 109 (254)
..+.+.+.++++|++++++++|++|.-+ + +.+.. +.+ ++++++|.+|.+++
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~~----~------v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVEDN----K------MYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEETT----E------EEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEECC----e------EEEEecccCCccccceEEEEeEEEEcCC
Confidence 5678889999999999999999999632 2 22221 112 56789999999865
No 180
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=89.06 E-value=1.5 Score=40.11 Aligned_cols=58 Identities=10% Similarity=-0.004 Sum_probs=44.1
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.+++. ++|+++++|++|..++ + ++. +.+.. .+| +.+++|.||+++...
T Consensus 214 d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~---~--~v~-v~~~~-~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 214 DEEMKRYAEKTFNEE-FYFDAKARVISTIEKE---D--AVE-VIYFD-KSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp CHHHHHHHHHHHHTT-SEEETTCEEEEEEECS---S--SEE-EEEEC-TTCCEEEEEESEEEECSCCE
T ss_pred CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcC---C--EEE-EEEEe-CCCceEEEECCEEEEeeCCc
Confidence 346778888999888 9999999999998876 3 232 44431 256 689999999999864
No 181
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=89.03 E-value=0.32 Score=43.01 Aligned_cols=58 Identities=10% Similarity=0.045 Sum_probs=41.5
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh-HhhcCC
Q 025358 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLLP 118 (254)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~-~~~Ll~ 118 (254)
.+.|.+.++ +++|+++++|++|..+++ + + .|++. +|++++||.||.|...+. +++.+.
T Consensus 131 ~~~L~~~~~--~~~i~~~~~v~~i~~~~~--~---v-~v~~~---~g~~~~ad~vV~AdG~~S~vR~~l~ 189 (398)
T 2xdo_A 131 RAILLNSLE--NDTVIWDRKLVMLEPGKK--K---W-TLTFE---NKPSETADLVILANGGMSKVRKFVT 189 (398)
T ss_dssp HHHHHHTSC--TTSEEESCCEEEEEECSS--S---E-EEEET---TSCCEEESEEEECSCTTCSCCTTTC
T ss_pred HHHHHhhcC--CCEEEECCEEEEEEECCC--E---E-EEEEC---CCcEEecCEEEECCCcchhHHhhcc
Confidence 334444433 378999999999998762 3 3 46664 788899999999998764 666654
No 182
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=88.96 E-value=0.71 Score=43.86 Aligned_cols=69 Identities=14% Similarity=0.174 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHhCCc--EEEcCceeeEEEeccCCCCcceEEEEEEee---cCCC--eEEEcCEEEEcCChhh-HhhcCC
Q 025358 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSK---ATDK--KVVQADAYVAACDVPG-IKRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~---~~~g--~~~~aD~VV~a~p~~~-~~~Ll~ 118 (254)
.+.+.|.+.+++.|+ +|+++++|++|..+++.++ ..+.|++.+ ..+| +++.||+||.|...+. +++.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~--~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAAD--YPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSS--CCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCc--CCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 567788899999997 9999999999998751001 123455542 0134 5789999999988764 777764
No 183
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=88.92 E-value=0.62 Score=41.29 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHhC-C-cEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChhh-HhhcC
Q 025358 48 YLSGPIRKYITDK-G-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG-IKRLL 117 (254)
Q Consensus 48 ~l~~~l~~~l~~~-G-g~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~~-~~~Ll 117 (254)
.+.+.|.+.+++. | ++|+++++|++|.. ++ + + .|.+.+..+| +++.||.||.|...+. +++.+
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~--~---v-~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RD--G---R-VLIGARDGHGKPQALGADVLVGADGIHSAVRAHL 175 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET--T---E-EEEEEEETTSCEEEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC--c---c-EEEEecCCCCCceEEecCEEEECCCccchhHHHh
Confidence 4567788888764 7 48999999999988 52 4 3 3555421136 5789999999998754 66644
No 184
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=88.86 E-value=0.66 Score=38.94 Aligned_cols=54 Identities=15% Similarity=-0.045 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|+++++ ++|.+|..++ + ...+.+. +|+.+.+|++|+|+...
T Consensus 71 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~---~---~~~v~~~---~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 71 DMIKVFNKHIEKYEVPVLL-DIVEKIENRG---D---EFVVKTK---RKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHTTTCCEEE-SCEEEEEEC--------CEEEEES---SSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEecC---C---EEEEEEC---CCCEEEcCEEEECcCCC
Confidence 5778888889999999999 9999998875 2 2345554 67889999999998865
No 185
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=88.85 E-value=0.82 Score=38.41 Aligned_cols=54 Identities=11% Similarity=0.063 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|+++++ ++|.+|..++ + . ..|.+. +|+.+.+|.||.|+...
T Consensus 60 ~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~---~--~-~~v~~~---~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 60 DFMQPWQEQCFRFGLKHEM-TAVQRVSKKD---S--H-FVILAE---DGKTFEAKSVIIATGGS 113 (311)
T ss_dssp HHHHHHHHHHHTTSCEEEC-SCEEEEEEET---T--E-EEEEET---TSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEEcC---C--E-EEEEEc---CCCEEECCEEEECCCCC
Confidence 5677888888999999998 8999998875 2 2 335454 77889999999999853
No 186
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=88.82 E-value=0.34 Score=45.18 Aligned_cols=49 Identities=10% Similarity=0.135 Sum_probs=38.3
Q ss_pred hCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcC-EEEEcCChh
Q 025358 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQAD-AYVAACDVP 111 (254)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD-~VV~a~p~~ 111 (254)
+.|++|++++.|++|..+++ + +++||.+....+|+ .+.|+ .||+|+..-
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~--~--~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDAD--R--RCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp CTTEEEECSCEEEEEEECTT--S--BEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred CCCcEEEeCCEEEEEEECCC--C--eEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 57899999999999999862 5 79999986311153 68898 999998863
No 187
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=88.62 E-value=0.56 Score=43.78 Aligned_cols=57 Identities=7% Similarity=0.068 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHhCCc--EEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|. +|+++++|.++..+++ + +.+.|.+. +|+++.||.||+|+...
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~--~--~~w~V~~~---~G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVEN--D--RLWEVTLD---NEEVVTCRFLISATGPL 146 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGG--G--TEEEEEET---TTEEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCC--C--CEEEEEEC---CCCEEEeCEEEECcCCC
Confidence 566777888888887 8999999999998763 3 34566665 88899999999999853
No 188
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=88.33 E-value=0.65 Score=41.77 Aligned_cols=59 Identities=10% Similarity=-0.129 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe---EEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK---VVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~---~~~aD~VV~a~p~~~ 112 (254)
.+.+.+.+++++.+..|+++++|++|...+ + .+.|++.+..+|+ ++.+|+||.|+..+.
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~---~---~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKD---G---SWVVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEET---T---EEEEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCC---C---eEEEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 456677777777788999999999998765 3 2446665211265 789999999988743
No 189
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=88.23 E-value=0.59 Score=39.55 Aligned_cols=53 Identities=13% Similarity=0.070 Sum_probs=42.4
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACD 109 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p 109 (254)
.+.+.+.+.+++.|++++.++ |+++..++ + ++.+|.+. +|+.+++|.+|+++.
T Consensus 181 ~~~~~~~~~l~~~g~~~~~~~-v~~~~~~~---~--~~~~v~~~---~g~~i~~~~~vi~~g 233 (304)
T 4fk1_A 181 ELSQTIMDELSNKNIPVITES-IRTLQGEG---G--YLKKVEFH---SGLRIERAGGFIVPT 233 (304)
T ss_dssp CCCHHHHHHHHTTTCCEECSC-EEEEESGG---G--CCCEEEET---TSCEECCCEEEECCE
T ss_pred cchhhhhhhhhccceeEeeee-EEEeecCC---C--eeeeeecc---ccceeeecceeeeec
Confidence 467788999999999998875 88887665 4 67788886 899999998887653
No 190
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=87.55 E-value=1.3 Score=42.16 Aligned_cols=51 Identities=14% Similarity=0.097 Sum_probs=39.4
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEE-eecCCC--eEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAM-SKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l-~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
.....+.+.++++|++++++++|++|. ++ + +.+ . +| +++++|.||.++...
T Consensus 574 ~~~~~~~~~l~~~GV~v~~~~~v~~i~--~~--~------v~~~~---~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 574 TTGWIHRTTLLSRGVKMIPGVSYQKID--DD--G------LHVVI---NGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp TTHHHHHHHHHHTTCEEECSCEEEEEE--TT--E------EEEEE---TTEEEEECCSEEEECCCEE
T ss_pred ccHHHHHHHHHhcCCEEEeCcEEEEEe--CC--e------EEEec---CCeEEEEeCCEEEECCCcc
Confidence 345567889999999999999999996 21 2 333 3 66 678999999998864
No 191
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=87.30 E-value=0.9 Score=38.43 Aligned_cols=57 Identities=18% Similarity=0.090 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|+++++++ |.++..++ + .+ .+.+..+.++..+.+|.+|.|+...
T Consensus 85 ~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~---~--~~-~v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEIITET-VSKVDLSS---K--PF-KLWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHHTTCEEECSC-EEEEECSS---S--SE-EEEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEEeE-EEEEEEcC---C--EE-EEEEEecCCCcEEEeCEEEECcCCC
Confidence 578888999999999999999 99998876 3 22 3433211267789999999998864
No 192
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=86.79 E-value=2.2 Score=39.22 Aligned_cols=62 Identities=11% Similarity=0.072 Sum_probs=42.2
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEeccC-CCCcceEEEEEEeecCCC-e--EEEcCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKA-ANAETYVKGLAMSKATDK-K--VVQADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~-~~g~~~v~gv~l~~~~~g-~--~~~aD~VV~a~p~~ 111 (254)
...+.+.+.+.++++|++|+++++|+++...++ .++ . ..+.+.. .+| + .+++|.||.++...
T Consensus 249 d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~--~-~~v~~~~-~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 249 DQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPG--R-LRVVAQS-TNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTC--E-EEEEEEE-SSSSCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCc--e-EEEEEEE-CCCcEEEEEECCEEEEecCCc
Confidence 346788889999999999999999888875331 002 1 2233321 134 2 56899999999853
No 193
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=86.77 E-value=1.4 Score=37.36 Aligned_cols=53 Identities=21% Similarity=0.177 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|+++++++ |..|..+++ + ..|.+ +|+.+.+|.||.|+...
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~--~----~~v~~----~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSSK--P----FKLFT----DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSSS--S----EEEEC----SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcCC--E----EEEEE----CCcEEEcCEEEECCCCC
Confidence 567888888999999999997 999987652 2 23433 67889999999999864
No 194
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=86.66 E-value=1.2 Score=41.34 Aligned_cols=57 Identities=9% Similarity=0.018 Sum_probs=41.7
Q ss_pred hHHHHHHHHHhCC--cEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 49 LSGPIRKYITDKG--GRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 49 l~~~l~~~l~~~G--g~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
+.+.+.+..++.| .+|+++++|.++..+++ + ..+.|.+. +|+++.||.||+|+....
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~--~--~~w~V~~~---~G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEA--T--NTWTVDTN---HGDRIRARYLIMASGQLS 154 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETT--T--TEEEEEET---TCCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCC--C--CeEEEEEC---CCCEEEeCEEEECcCCCC
Confidence 4455555566665 68999999999998752 2 23456664 788899999999998643
No 195
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=86.43 E-value=1 Score=45.09 Aligned_cols=53 Identities=9% Similarity=0.016 Sum_probs=41.1
Q ss_pred HHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEee--cC--CC--eEEEcCEEEEcCCh
Q 025358 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--AT--DK--KVVQADAYVAACDV 110 (254)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~--~~--~g--~~~~aD~VV~a~p~ 110 (254)
.+.+++.|++|++++.|++|.-+++ + ++.+|++.. .. +| +++++|.||+++..
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~--~--~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADEN--G--ELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTT--S--CEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCC--C--CEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 6788999999999999999987411 3 577888862 00 14 67999999999885
No 196
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=85.64 E-value=1.8 Score=36.61 Aligned_cols=55 Identities=11% Similarity=0.010 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEec--cCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYD--KAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~--~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|++++. .+|.+|..+ + + ....|.+. +|+.+.+|++|.|+...
T Consensus 66 ~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~---~--~~~~v~~~---~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 66 ELAQRMHQQAEKFGAKVEM-DEVQGVQHDATS---H--PYPFTVRG---YNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCEEEEEECTTS---S--SCCEEEEE---SSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEe-eeEEEEEeccCC---C--ceEEEEEC---CCCEEEeCEEEECcCCC
Confidence 5677888889999999998 689999886 4 2 22345555 78889999999998864
No 197
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=85.33 E-value=1.3 Score=39.73 Aligned_cols=57 Identities=11% Similarity=-0.069 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEE--EEEEeecCCCe----EEEcCEEEEcCCh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVK--GLAMSKATDKK----VVQADAYVAACDV 110 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~--gv~l~~~~~g~----~~~aD~VV~a~p~ 110 (254)
.+.+.+....++.|++|+++++|.+|..+++ ++ +.+ .|.+. +|+ ++.+|.||+|+..
T Consensus 128 ~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~-~~--~~~~~~V~~~---~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 128 EFNDYLRWVASHFQEQSRYGEEVLRIEPMLS-AG--QVEALRVISR---NADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHTTCTTTEEESEEEEEEEEEEE-TT--EEEEEEEEEE---ETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEEecC-CC--ceEEEEEEEe---cCCCceEEEEeCEEEECCCC
Confidence 3455566666777999999999999988631 12 344 34443 343 7899999999885
No 198
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=85.22 E-value=3.4 Score=35.94 Aligned_cols=65 Identities=9% Similarity=0.148 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHhC-CcEEEcCceeeEEEeccCCC-CcceEEEEEEee---c--------CCCeEEEc-------------
Q 025358 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAAN-AETYVKGLAMSK---A--------TDKKVVQA------------- 101 (254)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~-g~~~v~gv~l~~---~--------~~g~~~~a------------- 101 (254)
.+...+.+.+++. |++++.+++|.+|..+++.+ |..+|.||++.. + .++.++.|
T Consensus 147 ~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~ 226 (326)
T 2gjc_A 147 LFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQ 226 (326)
T ss_dssp HHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSST
T ss_pred HHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccc
Confidence 4567788888885 99999999999999874101 101588887741 0 13467899
Q ss_pred --CEEEEcCChhh
Q 025358 102 --DAYVAACDVPG 112 (254)
Q Consensus 102 --D~VV~a~p~~~ 112 (254)
|.||.|+....
T Consensus 227 ~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 227 KHGVILSTTGHDG 239 (326)
T ss_dssp TCCEEEECCCCC-
T ss_pred cCCEEEECcCCCc
Confidence 99999998653
No 199
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=85.18 E-value=1.6 Score=36.71 Aligned_cols=54 Identities=13% Similarity=0.049 Sum_probs=42.0
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
..+.+.+.+.+++.|++++.++ |..+..++ + . ..+ +. +|+.+.+|.+|.|+...
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~---~--~-~~v-~~---~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 62 PLLMERMHEHATKFETEIIFDH-INKVDLQN---R--P-FRL-NG---DNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEECSS---S--S-EEE-EE---SSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEEee-eeEEEecC---C--E-EEE-Ee---CCCEEEcCEEEECCCCC
Confidence 3567788888999999999997 99998765 2 2 233 44 77889999999998863
No 200
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=84.70 E-value=2.4 Score=37.19 Aligned_cols=65 Identities=9% Similarity=0.186 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHh-CCcEEEcCceeeEEEeccC--------------CCCcceEEEEEEeec---C--------CCeEEEc
Q 025358 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKA--------------ANAETYVKGLAMSKA---T--------DKKVVQA 101 (254)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~--------------~~g~~~v~gv~l~~~---~--------~g~~~~a 101 (254)
.+.+.|.+.+++ .|++|+.+++|.+|..+++ ++|..++.||++... . ++.++.|
T Consensus 161 d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~A 240 (344)
T 3jsk_A 161 LFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINA 240 (344)
T ss_dssp HHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEEC
T ss_pred HHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEc
Confidence 456788888888 5999999999999988651 001126888877410 1 2357999
Q ss_pred CEEEEcCChhh
Q 025358 102 DAYVAACDVPG 112 (254)
Q Consensus 102 D~VV~a~p~~~ 112 (254)
++||.|+....
T Consensus 241 k~VV~ATG~~s 251 (344)
T 3jsk_A 241 PVIISTTGHDG 251 (344)
T ss_dssp SEEEECCCSSS
T ss_pred CEEEECCCCCc
Confidence 99999998753
No 201
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=84.57 E-value=0.66 Score=42.23 Aligned_cols=51 Identities=20% Similarity=0.167 Sum_probs=36.8
Q ss_pred HHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEee-----------------cCCCeEEEcCEEEEcCCh
Q 025358 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-----------------ATDKKVVQADAYVAACDV 110 (254)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~-----------------~~~g~~~~aD~VV~a~p~ 110 (254)
.+.+++.|++|++++.+.+|.-+ | ++.+|.+.. ++++.++++|.||.++..
T Consensus 309 ~~~~~~~Gv~~~~~~~~~~i~~~----g--~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 309 VAHAEEEGVEFIWQAAPEGFTGD----T--VVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HHHHHHTTCEEECCSSSCCEEEE----E--EEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHCCCEEEeCCCceEEeCC----C--cEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 56788899999999999999742 4 555554421 011247899999999885
No 202
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=83.96 E-value=2.1 Score=36.52 Aligned_cols=53 Identities=13% Similarity=0.116 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEE-EEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGL-AMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv-~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|+++++++ |.+|.. ++ . ..| .+. +|+.+.+|.+|.|+...
T Consensus 72 ~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~--~----~~v~~~~---~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 72 ELMDEMREQALRFGADLRMED-VESVSL-HG--P----LKSVVTA---DGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEEC-SS--S----SEEEEET---TSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEEee-EEEEEe-CC--c----EEEEEeC---CCCEEEeCEEEECCCCC
Confidence 567788888899999999997 999987 31 2 234 443 67889999999998853
No 203
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=83.80 E-value=1.5 Score=39.37 Aligned_cols=47 Identities=15% Similarity=0.061 Sum_probs=38.3
Q ss_pred HHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+++.|++++++++|+.|..++ . .|.+. +|+.+.+|.+|.|+...
T Consensus 67 ~~~~~~~gv~~~~~~~v~~i~~~~---~-----~v~~~---~g~~~~~d~lviAtG~~ 113 (431)
T 1q1r_A 67 PDAYAAQNIQLLGGTQVTAINRDR---Q-----QVILS---DGRALDYDRLVLATGGR 113 (431)
T ss_dssp HHHHHHTTEEEECSCCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCEE
T ss_pred HHHHHhCCCEEEeCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEEcCCCC
Confidence 467788999999999999998764 2 35564 78889999999998853
No 204
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=83.23 E-value=1.1 Score=40.80 Aligned_cols=55 Identities=15% Similarity=0.120 Sum_probs=39.3
Q ss_pred HHHHHHHHh------CCcEEEcCceeeEEEeccCCCCcceEEEEEEeec-------------CCC--eEEEcCEEEEcCC
Q 025358 51 GPIRKYITD------KGGRFHLRWGCREILYDKAANAETYVKGLAMSKA-------------TDK--KVVQADAYVAACD 109 (254)
Q Consensus 51 ~~l~~~l~~------~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~-------------~~g--~~~~aD~VV~a~p 109 (254)
+.+.+++++ +|++|++++.+.+|.-+ + ++.+|++..+ .+| +++++|.||.++.
T Consensus 250 ~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~----~--~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G 323 (456)
T 1lqt_A 250 KVLRGYADREPRPGHRRMVFRFLTSPIEIKGK----R--KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVG 323 (456)
T ss_dssp HHHHHHHTCC-CTTSEEEEEECSEEEEEEECS----S--SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSC
T ss_pred HHHHHHhhcCCCCCCceEEEEeCCCCeEEecC----C--cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccc
Confidence 445566666 89999999999999754 3 4666666410 024 4689999999998
Q ss_pred hh
Q 025358 110 VP 111 (254)
Q Consensus 110 ~~ 111 (254)
..
T Consensus 324 ~~ 325 (456)
T 1lqt_A 324 YR 325 (456)
T ss_dssp EE
T ss_pred cc
Confidence 64
No 205
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=83.11 E-value=2 Score=39.02 Aligned_cols=49 Identities=4% Similarity=0.070 Sum_probs=34.8
Q ss_pred CCcEEEcCceeeEEEeccCCCCcceEEEEEEeec------------CCC--eEEEcCEEEEcCChh
Q 025358 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKA------------TDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 60 ~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~------------~~g--~~~~aD~VV~a~p~~ 111 (254)
+|++|++++.+.+|.-+++ ++ ++.+|++... .+| +.+++|.||.++...
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~--~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~ 332 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GR--RAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYK 332 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SS--SEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEE
T ss_pred ceEEEECCCChheEEcCCC-Cc--eEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCC
Confidence 8999999999999986531 11 3666665410 023 678999999998853
No 206
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=82.62 E-value=2.4 Score=42.60 Aligned_cols=55 Identities=9% Similarity=0.098 Sum_probs=41.0
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEee---cCCC---------eEEEcCEEEEcCCh
Q 025358 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATDK---------KVVQADAYVAACDV 110 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~---~~~g---------~~~~aD~VV~a~p~ 110 (254)
+...+.+++.|++|++++.+.+|..++ | ++.+|++.. +.+| .+++||.||.++..
T Consensus 374 ~~e~~~~~~~Gv~~~~~~~~~~i~~~~---g--~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 374 PEEVELAKEEKCEFLPFLSPRKVIVKG---G--RIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEEEET---T--EEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHHHHcCCEEEeCCCceEEEccC---C--eEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 344577889999999999999998654 5 787777641 1122 36899999999864
No 207
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=82.29 E-value=1.2 Score=41.87 Aligned_cols=50 Identities=10% Similarity=0.049 Sum_probs=36.1
Q ss_pred HhCCcEEEcCceeeEEEeccCC-CCcceEEEEEEeecCCCe--EEEcC-EEEEcCCh
Q 025358 58 TDKGGRFHLRWGCREILYDKAA-NAETYVKGLAMSKATDKK--VVQAD-AYVAACDV 110 (254)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~~~~-~g~~~v~gv~l~~~~~g~--~~~aD-~VV~a~p~ 110 (254)
++.+.+|++++.|++|.++++. ++ +++||+... .+|+ ++.|. .||+++..
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~--ra~GV~~~~-~~G~~~~v~A~kEVILsAGa 291 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTP--RAVGVEFGT-HKGNTHNVYAKHEVLLAAGS 291 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSC--EEEEEEEES-STTCEEEEEEEEEEEECSCT
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCC--EEEEEEEEe-cCCcEEEEEECCEEEEeCCc
Confidence 4678999999999999998300 15 899999852 1453 56786 68888774
No 208
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=81.65 E-value=1.7 Score=38.60 Aligned_cols=47 Identities=13% Similarity=0.084 Sum_probs=38.3
Q ss_pred HHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+++++.|++++++++|..|..++ . .|.+. +|+.+.+|++|+|+...
T Consensus 64 ~~~~~~~~i~~~~~~~v~~id~~~---~-----~v~~~---~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 64 ADWYGEARIDMLTGPEVTALDVQT---R-----TISLD---DGTTLSADAIVIATGSR 110 (410)
T ss_dssp TTHHHHTTCEEEESCCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCEE
T ss_pred HHHHHHCCCEEEeCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEEccCCc
Confidence 456788999999999999998765 2 35565 78899999999998853
No 209
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=81.62 E-value=2 Score=37.56 Aligned_cols=47 Identities=17% Similarity=0.131 Sum_probs=37.4
Q ss_pred HHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
...+++++.|++++++++|+.|..++ . . |. . +|+++.+|++|+|+..
T Consensus 65 ~~~~~~~~~~v~~~~g~~v~~id~~~---~--~---V~-~---~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 65 YSLDWYRKRGIEIRLAEEAKLIDRGR---K--V---VI-T---EKGEVPYDTLVLATGA 111 (367)
T ss_dssp SCHHHHHHHTEEEECSCCEEEEETTT---T--E---EE-E---SSCEEECSEEEECCCE
T ss_pred CCHHHHHhCCcEEEECCEEEEEECCC---C--E---EE-E---CCcEEECCEEEECCCC
Confidence 44567788999999999999998664 2 2 33 3 6788999999999885
No 210
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=81.56 E-value=3.4 Score=38.54 Aligned_cols=62 Identities=16% Similarity=0.135 Sum_probs=41.2
Q ss_pred cchhHHHHHHHHHhCCcEEEcCceeeEEEec------cCCCCcceEEEEEEeecCCCeEEE--cCEEEEcCChh
Q 025358 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYD------KAANAETYVKGLAMSKATDKKVVQ--ADAYVAACDVP 111 (254)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~------~~~~g~~~v~gv~l~~~~~g~~~~--aD~VV~a~p~~ 111 (254)
.+.+.+.+.+.+++.|++|++++.+++|.-. ++.++ ++. +.+.. .+|+.++ +|.||.++...
T Consensus 325 d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~--~~~-v~~~~-~~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 325 DQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPG--LLL-VKGHY-TDGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCC--EEE-EEEEE-TTSCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCc--eEE-EEEEe-CCCcEEeccCCEEEEEeCCc
Confidence 3457788889999999999999988888532 10012 221 22211 2666555 99999999853
No 211
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=81.37 E-value=3 Score=38.62 Aligned_cols=61 Identities=13% Similarity=0.168 Sum_probs=43.2
Q ss_pred hHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChhh-HhhcCC
Q 025358 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG-IKRLLP 118 (254)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~~-~~~Ll~ 118 (254)
+-+.|.+.+++. |+++++|++|..+++ + +. +++.+..+| +++.||+||.|...+. +++.+.
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~--~---v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 203 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDD--H---VR-ATITDLRTGATRAVHARYLVACDGASSPTRKALG 203 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSS--C---EE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCC--E---EE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcC
Confidence 455677777766 999999999998763 3 43 555421235 5789999999988764 666553
No 212
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=81.15 E-value=1.4 Score=41.02 Aligned_cols=50 Identities=10% Similarity=0.080 Sum_probs=39.3
Q ss_pred HHHHHHHHhCCcEEEc--CceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHh
Q 025358 51 GPIRKYITDKGGRFHL--RWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIK 114 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~--~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~ 114 (254)
+...+.|.+.++++.. +++|++|.-+ ||++. +| .+++|.||+|+......
T Consensus 342 ~~y~~al~~~nV~lv~~~~~~I~~it~~----------gv~~~---dG-~~~~D~IV~ATGf~~~~ 393 (545)
T 3uox_A 342 TNYYETYNRDNVHLVDIREAPIQEVTPE----------GIKTA---DA-AYDLDVIIYATGFDAVT 393 (545)
T ss_dssp SSHHHHTTSTTEEEEETTTSCEEEEETT----------EEEES---SC-EEECSEEEECCCCBSSS
T ss_pred ccHHHHhcCCCEEEEecCCCCceEEccC----------eEEeC---CC-eeecCEEEECCcccccc
Confidence 3456677788999986 8999998632 47776 88 89999999999987543
No 213
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=81.13 E-value=1.6 Score=37.87 Aligned_cols=57 Identities=7% Similarity=0.060 Sum_probs=40.9
Q ss_pred HHHHHH-hCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh-HhhcC
Q 025358 53 IRKYIT-DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLL 117 (254)
Q Consensus 53 l~~~l~-~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~-~~~Ll 117 (254)
+.+.|. ..+.+|+++++|.+++..++ + ++ .|.+. ||++++||.||-|=..+. +++.+
T Consensus 114 L~~~L~~~~~~~v~~~~~v~~~~~~~~--~--~v-~v~~~---dG~~~~adlvVgADG~~S~vR~~l 172 (412)
T 4hb9_A 114 LKEILNKGLANTIQWNKTFVRYEHIEN--G--GI-KIFFA---DGSHENVDVLVGADGSNSKVRKQY 172 (412)
T ss_dssp HHHHHHTTCTTTEECSCCEEEEEECTT--S--CE-EEEET---TSCEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHhhccceEEEEEEEEeeeEcCC--C--eE-EEEEC---CCCEEEeeEEEECCCCCcchHHHh
Confidence 444443 34678999999999987653 4 33 46665 899999999999977754 55533
No 214
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=79.56 E-value=4.2 Score=34.14 Aligned_cols=53 Identities=8% Similarity=-0.031 Sum_probs=40.9
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|++++. .+|.++..++ + .+ .|.+ +|+.+.+|.+|.|+...
T Consensus 73 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~---~--~~-~v~~----~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 73 ELAKLFADHAANYAKIREG-VEVRSIKKTQ---G--GF-DIET----NDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHHHHHTTSEEEET-CCEEEEEEET---T--EE-EEEE----SSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEE-eeEEEEEEeC---C--EE-EEEE----CCCEEEeCEEEECCCCC
Confidence 4667788888999999999 7999998765 2 22 2443 56689999999998853
No 215
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=78.86 E-value=3.1 Score=40.06 Aligned_cols=25 Identities=8% Similarity=-0.097 Sum_probs=22.2
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEE
Q 025358 50 SGPIRKYITDKGGRFHLRWGCREIL 74 (254)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~ 74 (254)
.+.+.+.+++.|++|+++++|++|.
T Consensus 574 ~~~~~~~l~~~GV~i~~~~~v~~i~ 598 (729)
T 1o94_A 574 YPNMMRRLHELHVEELGDHFCSRIE 598 (729)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEE
T ss_pred HHHHHHHHHhCCCEEEcCcEEEEEE
Confidence 3567888999999999999999996
No 216
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=77.68 E-value=3.7 Score=33.79 Aligned_cols=54 Identities=9% Similarity=-0.048 Sum_probs=40.7
Q ss_pred hhHHHHHHHHHhC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++. |++++ +++|++|..++ + -..|.+. +|+++.+|.+|.|+...
T Consensus 57 ~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~---~---~~~v~~~---~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 57 EIIAEARRQIERYPTIHWV-EGRVTDAKGSF---G---EFIVEID---GGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHHTTCTTEEEE-ESCEEEEEEET---T---EEEEEET---TSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHhcCCeEEE-EeEEEEEEEcC---C---eEEEEEC---CCCEEEcCEEEECCCCC
Confidence 5677888888887 56665 45999998876 2 2446664 78889999999998864
No 217
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=77.22 E-value=2.7 Score=37.16 Aligned_cols=50 Identities=10% Similarity=0.021 Sum_probs=40.2
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
.....+.+++.|++++++++|.+|..++ . .|.+. +|+.+.+|.+|+|+..
T Consensus 68 ~~~~~~~~~~~~i~~~~~~~v~~id~~~---~-----~v~~~---~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 68 CIRPAQFWEDKAVEMKLGAEVVSLDPAA---H-----TVKLG---DGSAIEYGKLIWATGG 117 (415)
T ss_dssp BSSCHHHHHHTTEEEEETCCEEEEETTT---T-----EEEET---TSCEEEEEEEEECCCE
T ss_pred ccCCHHHHHHCCcEEEeCCEEEEEECCC---C-----EEEEC---CCCEEEeeEEEEccCC
Confidence 3445678889999999999999998764 2 35564 7889999999999874
No 218
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=77.09 E-value=0.64 Score=41.73 Aligned_cols=51 Identities=18% Similarity=0.130 Sum_probs=39.5
Q ss_pred hHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
+..++.+.+++.|++++.+ +|++|..++ . .|++. +|+++++|++|.|+...
T Consensus 58 i~~~~~~~~~~~gv~~i~~-~v~~Id~~~---~-----~V~~~---~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 58 ISVPLAPLLPKFNIEFINE-KAESIDPDA---N-----TVTTQ---SGKKIEYDYLVIATGPK 108 (430)
T ss_dssp SEEESTTTGGGGTEEEECS-CEEEEETTT---T-----EEEET---TCCEEECSEEEECCCCE
T ss_pred hhhcHHHHHHHCCcEEEEe-EEEEEECCC---C-----EEEEC---CCCEEECCEEEEeCCCC
Confidence 3345566777889999876 799998875 2 25665 88999999999999864
No 219
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=75.28 E-value=1.6 Score=40.45 Aligned_cols=56 Identities=7% Similarity=0.123 Sum_probs=40.0
Q ss_pred HHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EE---EcCEEEEcCChh
Q 025358 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VV---QADAYVAACDVP 111 (254)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~---~aD~VV~a~p~~ 111 (254)
+.+..++.|++|++++.|++|..+++.++ +++||++.. .+|+ .+ .++.||+|+..-
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~--~~~GV~~~~-~~g~~~~~~v~a~k~VILaaGa~ 260 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGL--TATGVIYRD-SNGTPHQAFVRSKGEVIVSAGTI 260 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSC--BEEEEEEEC-TTSCEEEEEEEEEEEEEECCHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCC--EEEEEEEEe-CCCceEEEEeccCCEEEEcCccc
Confidence 33344678999999999999999752013 799998852 2454 34 578999998864
No 220
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=74.68 E-value=1.7 Score=40.44 Aligned_cols=44 Identities=18% Similarity=0.133 Sum_probs=34.4
Q ss_pred HHhCCcEEEc--CceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhH
Q 025358 57 ITDKGGRFHL--RWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGI 113 (254)
Q Consensus 57 l~~~Gg~i~~--~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~ 113 (254)
+.+.++++.. +.+|++|.- .||++. +|+.+++|.||+|+.....
T Consensus 340 l~~~nV~lv~~~~~~I~~it~----------~gv~~~---dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 340 YNRPNVEAVAIKENPIREVTA----------KGVVTE---DGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp GGSTTEEEEETTTSCEEEECS----------SEEEET---TCCEEECSEEEECCCBSCS
T ss_pred hcCCCEEEEeCCCCCccEEec----------CeEEcC---CCCEEECCEEEECCccCcc
Confidence 3456888886 789999852 247776 8999999999999997643
No 221
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=74.37 E-value=3.8 Score=36.70 Aligned_cols=52 Identities=10% Similarity=0.024 Sum_probs=36.6
Q ss_pred HHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+++.|++++++++|.+|..++ . ...+....+.++..+.+|++|.|+...
T Consensus 64 ~~~~~~~~i~~~~~~~V~~id~~~---~---~~~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 64 EKFYDRKQITVKTYHEVIAINDER---Q---TVSVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHHHHHCCEEEETEEEEEEETTT---T---EEEEEETTTTEEEEEECSEEEECCCEE
T ss_pred HHHHHhcCCEEEeCCeEEEEEccC---c---EEEEEeccCCceEEEEcCEEEECCCCc
Confidence 456778899999999999998775 2 222322212234568899999998853
No 222
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=73.42 E-value=2.8 Score=39.39 Aligned_cols=52 Identities=10% Similarity=0.061 Sum_probs=37.6
Q ss_pred HHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEc-CEEEEcCCh
Q 025358 57 ITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQA-DAYVAACDV 110 (254)
Q Consensus 57 l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~a-D~VV~a~p~ 110 (254)
.++.|.+|++++.|++|.++++ ++..+++||.... .+|+ .+.| +.||+++..
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~-~~~~~~~GV~~~~-~~g~~~~v~A~k~VILaaG~ 295 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQT-ASGPQAVGVNFGT-NKAVNFDVFAKHEVLLAAGS 295 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEE-TTEEEEEEEEEEE-ETTEEEEEEEEEEEEECSCT
T ss_pred hcCCCcEEEcCCEEEEEEECCC-CCCCEEEEEEEEe-CCCcEEEEEecccEEEccCC
Confidence 3456899999999999998742 1001799998752 1554 5678 889999885
No 223
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=73.39 E-value=6.5 Score=35.17 Aligned_cols=50 Identities=6% Similarity=0.035 Sum_probs=37.9
Q ss_pred HHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
..+.+++.|++++++++|.+|..++ + ...+.. .++++.+.+|.+|.|+..
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~~---~---~v~v~~--~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVEN---Q---LIAWTR--KEEQQWYSYDKLILATGA 113 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETTT---T---EEEEEE--TTEEEEEECSEEEECCCC
T ss_pred CHHHHHHCCCEEEECCEEEEEECCC---C---EEEEEe--cCceEEEEcCEEEECCCc
Confidence 4567788999999999999998875 3 222331 235678999999999875
No 224
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=73.38 E-value=5.1 Score=35.70 Aligned_cols=52 Identities=23% Similarity=0.314 Sum_probs=39.9
Q ss_pred hHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
+...+.+.+++.|++++. .+|++|..++ + .|.+. +|+.+.+|++|.|+....
T Consensus 61 ~~~~l~~~~~~~gv~~~~-~~v~~id~~~---~-----~V~~~---~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 61 IAFPIRHYVERKGIHFIA-QSAEQIDAEA---Q-----NITLA---DGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp HEEECHHHHHTTTCEEEC-SCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCCEE
T ss_pred HHHHHHHHHHHCCCEEEE-eEEEEEEcCC---C-----EEEEC---CCCEEECCEEEECCCCCc
Confidence 344567888889999985 6999998764 2 35565 788899999999998643
No 225
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=73.33 E-value=3.4 Score=38.76 Aligned_cols=49 Identities=12% Similarity=0.124 Sum_probs=36.0
Q ss_pred HhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEc-CEEEEcCCh
Q 025358 58 TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQA-DAYVAACDV 110 (254)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~a-D~VV~a~p~ 110 (254)
++.+.+|++++.|++|.++++ ++ +++||++... +|+ ++.| ..||+++..
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~-~~--~a~GV~~~~~-~g~~~~v~A~keVILsaGa 268 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEA-DR--TCKGVTVVTA-AGNELNFFADREVILSQGV 268 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETT-TT--EEEEEEEEET-TSCEEEEEEEEEEEECSHH
T ss_pred cCCCeEEEcCcEEEEEEEeCC-CC--EEEEEEEEeC-CCcEEEEEeeeEEEEcccc
Confidence 345899999999999999832 15 8999998632 254 4567 468888775
No 226
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=72.87 E-value=2.8 Score=37.10 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=35.8
Q ss_pred HHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+++.|++++++++|+.|..++ . .|.+. +|+.+.+|.+|.|+...
T Consensus 68 ~~~~~~v~~~~~~~v~~i~~~~---~-----~v~~~---~g~~~~~d~lviAtG~~ 112 (408)
T 2gqw_A 68 CKRAPEVEWLLGVTAQSFDPQA---H-----TVALS---DGRTLPYGTLVLATGAA 112 (408)
T ss_dssp CTTSCSCEEEETCCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCEE
T ss_pred HHHHCCCEEEcCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEECCCCC
Confidence 4567899999999999998764 2 35564 78889999999998853
No 227
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=72.41 E-value=2.7 Score=39.34 Aligned_cols=48 Identities=6% Similarity=0.041 Sum_probs=36.2
Q ss_pred HhCCcEEEcCceeeEEEec----cCCCCcceEEEEEEeecCCC---eEEEc-CEEEEcCCh
Q 025358 58 TDKGGRFHLRWGCREILYD----KAANAETYVKGLAMSKATDK---KVVQA-DAYVAACDV 110 (254)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~----~~~~g~~~v~gv~l~~~~~g---~~~~a-D~VV~a~p~ 110 (254)
++.+.+|++++.|++|.++ ++ + +++||++... +| .++.| ..||+++..
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~--~--rA~GVe~~~~-~g~~~~~v~A~kEVILsAGa 274 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGL--P--AFRCVEYAEQ-EGAPTTTVCAKKEVVLSAGS 274 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTE--E--ECCEEEEESS-TTSCCEEEEEEEEEEECCHH
T ss_pred cCCCeEEECCCEEEEEEeecCCCCC--C--EEEEEEEEEC-CCceEEEEEeeeEEEEecCC
Confidence 4678999999999999998 21 3 7999998631 23 35677 678888775
No 228
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=71.30 E-value=3.7 Score=37.37 Aligned_cols=48 Identities=17% Similarity=0.086 Sum_probs=37.0
Q ss_pred hCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
+.+.+|.+++.|.+|..++ + +++||..........+.|+.||+++..-
T Consensus 223 r~nl~v~~~~~v~~i~~~~---~--~a~gv~~~~~~~~~~~~a~~VILsAGai 270 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG---N--QVRSLEVVGRQGSAEVFADQIVLCAGAL 270 (526)
T ss_dssp CTTEEEECSCEEEEEEEET---T--EEEEEEEEETTEEEEEEEEEEEECSHHH
T ss_pred CCCeEEEeCCEEEEEEecC---C--eEEEEEEEecCceEEEeecceEEccccc
Confidence 3468999999999999987 5 8999987632222457799999998853
No 229
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=71.02 E-value=5.1 Score=36.08 Aligned_cols=55 Identities=11% Similarity=0.035 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.++ ++|+++++|++|..+++ + ++ .+.+.. .+|+ ++++|.||+++...
T Consensus 215 ~~~~~l~~~l~---v~i~~~~~v~~i~~~~~--~--~v-~v~~~~-~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 215 DIVNTLLSILK---LNIKFNSPVTEVKKIKD--D--EY-EVIYST-KDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHHHHHHHC---CCEECSCCEEEEEEEET--T--EE-EEEECC-TTSCCEEEEESCEEECCCEE
T ss_pred HHHHHHHhcCE---EEEEECCEEEEEEEcCC--C--cE-EEEEEe-cCCceEEEEcCEEEECcCCC
Confidence 34444554444 99999999999987641 2 33 355531 1354 79999999999863
No 230
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=69.73 E-value=7.1 Score=32.64 Aligned_cols=55 Identities=7% Similarity=-0.082 Sum_probs=39.4
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
.+.+.+.+.+++.++..+.+..+..+...++ + ...+.+. +|+++++|++|+|+..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~v~~~---~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 61 EFKEIGLNEVMKYPSVHYYEKTVVMITKQST--G---LFEIVTK---DHTKYLAERVLLATGM 115 (304)
T ss_dssp HHHHHHHHHHTTSTTEEEEECCEEEEEECTT--S---CEEEEET---TCCEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCEEEEeeEEEEeeecCC--C---cEEEEEC---CCCEEEeCEEEEccCC
Confidence 4566667777777777677777777766542 3 3345554 8899999999999885
No 231
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=69.09 E-value=7.3 Score=34.22 Aligned_cols=49 Identities=12% Similarity=0.013 Sum_probs=39.3
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
.....+.+++.|+++++ ++|.+|..++ . .|.+. +|+.+.+|.+|+|+..
T Consensus 60 ~~~~~~~~~~~~i~~~~-~~v~~id~~~---~-----~v~~~---~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 60 MFRPEKFFQDQAIELIS-DRMVSIDREG---R-----KLLLA---SGTAIEYGHLVLATGA 108 (404)
T ss_dssp BSSCHHHHHHTTEEEEC-CCEEEEETTT---T-----EEEES---SSCEEECSEEEECCCE
T ss_pred cCCCHHHHHhCCCEEEE-EEEEEEECCC---C-----EEEEC---CCCEEECCEEEEeeCC
Confidence 34456778889999999 9999998765 2 35565 7889999999999885
No 232
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=68.85 E-value=5.4 Score=35.02 Aligned_cols=52 Identities=12% Similarity=0.082 Sum_probs=39.6
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe----EEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK----VVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~----~~~aD~VV~a~p~~ 111 (254)
.+...+.+.+++.|++++.+ +|+++..++ . .|.+. +|+ ++.+|.+|+|+...
T Consensus 57 ~~~~~~~~~~~~~gv~~~~~-~v~~i~~~~---~-----~V~~~---~g~~~~~~~~~d~lViAtG~~ 112 (409)
T 3h8l_A 57 ELKVDLSEALPEKGIQFQEG-TVEKIDAKS---S-----MVYYT---KPDGSMAEEEYDYVIVGIGAH 112 (409)
T ss_dssp CEEEEHHHHTGGGTCEEEEC-EEEEEETTT---T-----EEEEE---CTTSCEEEEECSEEEECCCCE
T ss_pred HHHHHHHHHHhhCCeEEEEe-eEEEEeCCC---C-----EEEEc---cCCcccceeeCCEEEECCCCC
Confidence 45667888888999999988 999998765 2 35555 343 48999999998763
No 233
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=68.76 E-value=8 Score=34.54 Aligned_cols=51 Identities=8% Similarity=0.169 Sum_probs=37.6
Q ss_pred HHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeec--CCCeEEEcCEEEEcCCh
Q 025358 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA--TDKKVVQADAYVAACDV 110 (254)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~--~~g~~~~aD~VV~a~p~ 110 (254)
.+.+.+++.|++++++++|..|..++ + .|.+... ++++.+.+|.+|.|+..
T Consensus 63 ~~~~~~~~~gv~~~~~~~v~~i~~~~---~-----~v~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 63 SSPEELSNLGANVQMRHQVTNVDPET---K-----TIKVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp CCHHHHHHTTCEEEESEEEEEEEGGG---T-----EEEEEETTTCCEEEEECSEEEECCCE
T ss_pred cCHHHHHHcCCEEEeCCEEEEEEcCC---C-----EEEEEecCCCceEEEECCEEEEccCC
Confidence 44667788999999999999998765 3 2444321 12567999999999885
No 234
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=68.34 E-value=12 Score=33.22 Aligned_cols=53 Identities=8% Similarity=-0.003 Sum_probs=37.8
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
..+.+.+++.|++++++++|..|..++ + .|.+....+|+ ++.+|++|.|+...
T Consensus 60 ~~~~~~~~~~gv~~~~~~~v~~i~~~~---~-----~v~~~~~~~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 60 YMTGEKMESRGVNVFSNTEITAIQPKE---H-----QVTVKDLVSGEERVENYDKLIISPGAV 114 (447)
T ss_dssp SCCHHHHHHTTCEEEETEEEEEEETTT---T-----EEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred cCCHHHHHHCCCEEEECCEEEEEeCCC---C-----EEEEEecCCCceEEEeCCEEEEcCCCC
Confidence 344567788899999999999998765 2 24443111354 48899999998753
No 235
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=67.89 E-value=9.6 Score=33.12 Aligned_cols=47 Identities=11% Similarity=-0.024 Sum_probs=36.3
Q ss_pred HHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
+.+.+++.|++++++++|..|..++ . .|.+ +++.+.+|.+|.|+...
T Consensus 66 ~~~~~~~~~v~~~~~~~v~~i~~~~---~-----~v~~----~~~~~~~d~lviAtG~~ 112 (384)
T 2v3a_A 66 PGAMAEQLNARILTHTRVTGIDPGH---Q-----RIWI----GEEEVRYRDLVLAWGAE 112 (384)
T ss_dssp HHHHHHHTTCEEECSCCCCEEEGGG---T-----EEEE----TTEEEECSEEEECCCEE
T ss_pred HHHHHHhCCcEEEeCCEEEEEECCC---C-----EEEE----CCcEEECCEEEEeCCCC
Confidence 4556688999999999999998764 2 2445 35579999999998853
No 236
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=67.26 E-value=8.7 Score=36.53 Aligned_cols=30 Identities=10% Similarity=-0.020 Sum_probs=25.0
Q ss_pred hhHHHHHHHHHhCC---cEEEcCceeeEEEecc
Q 025358 48 YLSGPIRKYITDKG---GRFHLRWGCREILYDK 77 (254)
Q Consensus 48 ~l~~~l~~~l~~~G---g~i~~~~~V~~i~~~~ 77 (254)
.+-+.|.+.+++.| ++|+++++|+.+..++
T Consensus 120 ~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 120 RIERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp HHHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred HHHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 34567888888887 8999999999999864
No 237
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=66.97 E-value=6.5 Score=36.50 Aligned_cols=54 Identities=7% Similarity=0.034 Sum_probs=39.9
Q ss_pred hHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCCh
Q 025358 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (254)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~ 110 (254)
+.+.+....++.|++++++++|.+|..++ + . +.+....+|+ .+.+|++|.|+..
T Consensus 95 ~~~~~~~~~~~~gi~v~~~~~V~~id~~~---~--~---v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 95 LVQTVERMSKRFNLDIRVLSEVVKINKEE---K--T---ITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp BSSCHHHHHHHTTCEEECSEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hccCHHHHHHhcCcEEEECCEEEEEECCC---C--E---EEEeecCCCCEEEEeCCEEEECCCC
Confidence 45566777788999999999999998875 3 2 3332112455 7889999999875
No 238
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=66.54 E-value=5.4 Score=35.64 Aligned_cols=43 Identities=21% Similarity=0.106 Sum_probs=32.6
Q ss_pred HHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-eEEEcCEEEEcCCh
Q 025358 57 ITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDV 110 (254)
Q Consensus 57 l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g-~~~~aD~VV~a~p~ 110 (254)
.++.|++++++++|.++..++ ..|.+. +| ..+.+|.+|+|+..
T Consensus 69 ~~~~gi~v~~~~~v~~i~~~~--------~~v~~~---~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 69 IKKRGIDLHLNAEVIEVDTGY--------VRVREN---GGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HHHTTCEEETTCEEEEECSSE--------EEEECS---SSEEEEECSEEEECCCE
T ss_pred HHhcCcEEEecCEEEEEecCC--------CEEEEC---CceEEEEcCEEEECCCC
Confidence 378999999999999996542 224343 55 47899999999874
No 239
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=64.91 E-value=4.1 Score=37.88 Aligned_cols=46 Identities=9% Similarity=-0.026 Sum_probs=34.9
Q ss_pred HHHHHhCCcEEE--cCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhH
Q 025358 54 RKYITDKGGRFH--LRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGI 113 (254)
Q Consensus 54 ~~~l~~~Gg~i~--~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~ 113 (254)
.+.+.+.++++. ...+|++|.-+ ||++. +| .+++|.||+|+.....
T Consensus 350 ~~al~~~~V~lvd~~~~~I~~it~~----------gv~~~---dG-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 350 YETYNRDNVELVDLRSTPIVGMDET----------GIVTT---GA-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp GGGGGSTTEEEEETTTSCEEEEETT----------EEEES---SC-EEECSEEEECCCEEES
T ss_pred HHHhcCCCEEEEeCCCCCceEEeCC----------cEEeC---CC-ceecCEEEECCccccc
Confidence 344566688887 46899998632 47776 88 9999999999998653
No 240
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=64.65 E-value=4 Score=37.22 Aligned_cols=41 Identities=7% Similarity=-0.009 Sum_probs=33.7
Q ss_pred hCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
+.|++++++++|.+|..++ . .|.+. +|+.+.+|.+|.|+..
T Consensus 102 ~~gv~~~~g~~v~~id~~~---~-----~V~~~---~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRD---N-----MVKLN---DGSQITYEKCLIATGG 142 (493)
T ss_dssp TCEEEEEETCCEEEEEGGG---T-----EEEET---TSCEEEEEEEEECCCE
T ss_pred cCCeEEEcCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEECCCC
Confidence 5689999999999998765 2 35565 7888999999999874
No 241
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=64.31 E-value=9.3 Score=34.48 Aligned_cols=51 Identities=16% Similarity=0.066 Sum_probs=35.5
Q ss_pred HHHHHH-hCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 53 IRKYIT-DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 53 l~~~l~-~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
..+.+. ..|++++++++|..|..++ + .|.+....+|+ .+.+|.+|.|+...
T Consensus 98 ~~~~~~~~~gv~~~~~~~v~~i~~~~---~-----~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 98 NVKTFRDKYGIDAKVRHEVTKVDTEK---K-----IVYAEHTKTKDVFEFSYDRLLIATGVR 151 (480)
T ss_dssp CHHHHHHTTCCEEESSEEEEEEETTT---T-----EEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred CHHHHHhhcCCEEEeCCEEEEEECCC---C-----EEEEEEcCCCceEEEEcCEEEECCCCc
Confidence 345554 4499999999999998765 2 23343112465 78999999998853
No 242
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=64.05 E-value=6.4 Score=36.18 Aligned_cols=53 Identities=6% Similarity=-0.027 Sum_probs=36.9
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCCh
Q 025358 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (254)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~ 110 (254)
.+.+....++.|++++++++|.+|..++ + . +.+....+| ..+.+|++|+|+..
T Consensus 61 ~~~~~~~~~~~~i~~~~~~~V~~id~~~---~--~---v~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 61 LQTPESFKARFNVEVRVKHEVVAIDRAA---K--L---VTVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp CCCHHHHHHHHCCEEETTEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred ccCHHHHHHhcCcEEEECCEEEEEECCC---C--E---EEEEecCCCCeEEEECCEEEECCCC
Confidence 3344555566899999999999998765 3 2 333311124 37899999999876
No 243
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=64.00 E-value=7.8 Score=34.25 Aligned_cols=34 Identities=12% Similarity=0.208 Sum_probs=27.1
Q ss_pred eCCCCcchhHHHHHHHHHhCCcEEEcCceeeEEEeccC
Q 025358 41 LKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKA 78 (254)
Q Consensus 41 ~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~ 78 (254)
..|+.. .|++.|++.+ +.+|++|++|++|...++
T Consensus 315 i~GG~~-~l~~~l~~~l---~~~i~l~~~V~~I~~~~~ 348 (376)
T 2e1m_A 315 IEGGSR-MLPETLAKDL---RDQIVMGQRMVRLEYYDP 348 (376)
T ss_dssp ETTCTT-HHHHHHHHHG---GGTEECSEEEEEEEECCC
T ss_pred ECCcHH-HHHHHHHHhc---CCcEEecCeEEEEEECCC
Confidence 455553 6899999887 568999999999998763
No 244
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=62.57 E-value=8.3 Score=34.92 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=37.5
Q ss_pred HHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
...+.+++.|++++++++|..|..++ + + |.+..+++++.+.+|.+|.|+...
T Consensus 97 ~~~~~~~~~gv~v~~~~~v~~i~~~~---~--~---v~v~~~g~~~~~~~d~lviAtG~~ 148 (490)
T 2bc0_A 97 SDKEELESLGAKVYMESPVQSIDYDA---K--T---VTALVDGKNHVETYDKLIFATGSQ 148 (490)
T ss_dssp CCHHHHHHTTCEEETTCCEEEEETTT---T--E---EEEEETTEEEEEECSEEEECCCEE
T ss_pred cCHHHHHhCCCEEEeCCEEEEEECCC---C--E---EEEEeCCcEEEEECCEEEECCCCC
Confidence 44667788999999999999998765 3 2 333211124678999999998853
No 245
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=62.14 E-value=15 Score=30.26 Aligned_cols=55 Identities=13% Similarity=0.185 Sum_probs=39.5
Q ss_pred chhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
+.+.+.+.+.+++.|++++++ +|.++ .+++ .+ + ..+.+. .++ .+.+|++|+|+..
T Consensus 62 ~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~-~~--~-~~v~~~--~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 62 ISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNS-DG--S-FTIKLE--GGK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHHHTTTCCEEECC-CEEEE-EECT-TS--C-EEEEET--TSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCC-CC--c-EEEEEe--cCC-EEEeCEEEEeeCC
Confidence 357788888889999999999 99999 5541 01 1 222243 244 8899999999886
No 246
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=61.33 E-value=56 Score=26.73 Aligned_cols=57 Identities=12% Similarity=0.040 Sum_probs=41.6
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEee--cCCCeEEEcCEEEEcCChh
Q 025358 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~--~~~g~~~~aD~VV~a~p~~ 111 (254)
.+...+.....+.+++.++.+.++...+ + ...++.+.. ..+++.+++|.|+.++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~--~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~ 249 (314)
T 4a5l_A 191 KTMQERVLNHPKIEVIWNSELVELEGDG---D--LLNGAKIHNLVSGEYKVVPVAGLFYAIGHS 249 (314)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESS---S--SEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred chhhhhhhcccceeeEeeeeeEEEEeee---e--ccceeEEeecccccceeeccccceEecccc
Confidence 3445566667788999999999998765 3 456666653 2356789999999998753
No 247
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=60.32 E-value=18 Score=32.94 Aligned_cols=62 Identities=8% Similarity=-0.045 Sum_probs=41.9
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCc---ceEEEEEEeecCCC--eEEEcCEEEEcCCh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAE---TYVKGLAMSKATDK--KVVQADAYVAACDV 110 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~---~~v~gv~l~~~~~g--~~~~aD~VV~a~p~ 110 (254)
.+.+-+..+.++.+..|++|++|+++...++ ++. ...+.|++.+...| +++.|++||+++..
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~-~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKS-DPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECS-STTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccc-cccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 4667777777778888999999999987543 110 01244555432223 46789999999984
No 248
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=60.11 E-value=13 Score=32.28 Aligned_cols=45 Identities=16% Similarity=0.017 Sum_probs=34.5
Q ss_pred HHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 55 KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 55 ~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
+.+.+.|++++.+ +|++|..++ . .|.+. +|+++.+|++|+|+...
T Consensus 63 ~~~~~~gv~~i~~-~v~~id~~~---~-----~v~~~---~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 63 DGLRAHGIQVVHD-SALGIDPDK---K-----LVKTA---GGAEFAYDRCVVAPGID 107 (401)
T ss_dssp HHHHHTTCEEECS-CEEEEETTT---T-----EEEET---TSCEEECSEEEECCCEE
T ss_pred HHHHHCCCEEEEe-EEEEEEccC---c-----EEEec---ccceeecceeeeccCCc
Confidence 3456789999765 799998775 2 25564 88899999999999864
No 249
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=60.00 E-value=15 Score=32.84 Aligned_cols=46 Identities=11% Similarity=0.013 Sum_probs=30.1
Q ss_pred HHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCCh
Q 025358 57 ITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (254)
Q Consensus 57 l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~ 110 (254)
.+..|++++++++|.+|..++ + .+.+....+|+ .+.+|.+|.|+..
T Consensus 76 ~~~~gi~~~~~~~V~~id~~~---~-----~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 76 RINKDVEALVETRAHAIDRAA---H-----TVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp -----CEEECSEEEEEEETTT---T-----EEEEEETTTCCEEEEECSEEEECCCE
T ss_pred hhhcCcEEEECCEEEEEECCC---C-----EEEEeecCCCCEEEEECCEEEEeCCC
Confidence 345899999999999998765 3 23343111354 7899999999875
No 250
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=59.43 E-value=15 Score=32.65 Aligned_cols=49 Identities=8% Similarity=0.029 Sum_probs=34.0
Q ss_pred HHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-eEEEcCEEEEcCCh
Q 025358 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDV 110 (254)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g-~~~~aD~VV~a~p~ 110 (254)
.+.+.+.+++.|++++.++.+. + +. + . ..|.+. +| +.+.+|.+|.|+..
T Consensus 94 ~~~~~~~~~~~gv~~~~g~~~~-i--d~---~--~-v~V~~~---~G~~~i~~d~lViATGs 143 (455)
T 1ebd_A 94 TGGVEGLLKGNKVEIVKGEAYF-V--DA---N--T-VRVVNG---DSAQTYTFKNAIIATGS 143 (455)
T ss_dssp HHHHHHHHHTTTCEEEESEEEE-E--ET---T--E-EEEEET---TEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHhCCCEEEEEEEEE-c--cC---C--e-EEEEeC---CCcEEEEeCEEEEecCC
Confidence 3445677888999999998664 3 33 2 2 234443 56 67899999999875
No 251
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=55.90 E-value=14 Score=30.48 Aligned_cols=54 Identities=13% Similarity=0.054 Sum_probs=38.9
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.+.+.+.+++.|.+++.++ |..+....+ + ..+.+. ++..+.+|.+|+|+...
T Consensus 67 ~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~--~----~~~~~~---~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 67 ELMMNMRTQSEKYGTTIITET-IDHVDFSTQ--P----FKLFTE---EGKEVLTKSVIIATGAT 120 (314)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSSS--S----EEEEET---TCCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhhcCcEEEEeE-EEEeecCCC--c----eEEEEC---CCeEEEEeEEEEccccc
Confidence 467888889999999987664 555555441 2 234443 78899999999999853
No 252
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=54.82 E-value=6.1 Score=35.05 Aligned_cols=51 Identities=18% Similarity=0.130 Sum_probs=38.2
Q ss_pred hHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
+...+.+.+++.|++++.+ +|++|..++ . .|.+. +|+.+.+|++|.|+...
T Consensus 58 ~~~~~~~~~~~~gv~~~~~-~v~~id~~~---~-----~v~~~---~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 58 ISVPLAPLLPKFNIEFINE-KAESIDPDA---N-----TVTTQ---SGKKIEYDYLVIATGPK 108 (430)
T ss_dssp SEEESTTTGGGGTEEEECS-CEEEEETTT---T-----EEEET---TCCEEECSEEEECCCCE
T ss_pred HHHHHHHHHHhcCCEEEEE-EEEEEECCC---C-----EEEEC---CCcEEECCEEEEcCCcc
Confidence 3445566777899999975 999998764 2 35564 78889999999998754
No 253
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=54.63 E-value=2.9 Score=35.81 Aligned_cols=49 Identities=16% Similarity=0.034 Sum_probs=37.1
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcCC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLP 118 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~ 118 (254)
.+...+.+.++++|++|+. ++|++|...+ .+.||.||.|+..+.- .|++
T Consensus 143 ~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~--------------------~~~a~~VV~A~G~~s~-~l~~ 191 (351)
T 3g3e_A 143 NYLQWLTERLTERGVKFFQ-RKVESFEEVA--------------------REGADVIVNCTGVWAG-ALQR 191 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCCCHHHHH--------------------HTTCSEEEECCGGGGG-GTSC
T ss_pred HHHHHHHHHHHHCCCEEEE-EEeCCHHHhh--------------------cCCCCEEEECCCcChH-hhcC
Confidence 5678999999999999998 8888774321 1458999999988763 3444
No 254
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=53.75 E-value=18 Score=32.29 Aligned_cols=49 Identities=12% Similarity=0.035 Sum_probs=34.3
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
+.+.+.+++.|++++.++.+. .+. + . ..|.+. +| +.+.+|.+|.|+...
T Consensus 95 ~~l~~~~~~~gv~~~~g~~~~---id~---~--~-v~V~~~---~G~~~~~~~d~lViAtG~~ 145 (464)
T 2a8x_A 95 AGVHFLMKKNKITEIHGYGTF---ADA---N--T-LLVDLN---DGGTESVTFDNAIIATGSS 145 (464)
T ss_dssp HHHHHHHHHTTCEEECEEEEE---SSS---S--E-EEEEET---TSCCEEEEEEEEEECCCEE
T ss_pred HHHHHHHHhCCCEEEEeEEEE---ecC---C--e-EEEEeC---CCceEEEEcCEEEECCCCC
Confidence 345677888999999998653 343 2 2 234443 56 689999999998864
No 255
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=51.38 E-value=19 Score=32.08 Aligned_cols=49 Identities=10% Similarity=0.098 Sum_probs=33.5
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCChh
Q 025358 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~~ 111 (254)
+.+.+.+++.|++++.++.+. + +. + . ..|.+. +| +.+.+|.+|.|+...
T Consensus 100 ~~~~~~~~~~gv~~~~g~~~~-~--~~---~--~-~~v~~~---~G~~~~i~~d~lIiAtGs~ 150 (470)
T 1dxl_A 100 RGIEGLFKKNKVTYVKGYGKF-V--SP---S--E-ISVDTI---EGENTVVKGKHIIIATGSD 150 (470)
T ss_dssp HHHHHHHHHHTCEEEESCEEE-E--ET---T--E-EEECCS---SSCCEEEECSEEEECCCEE
T ss_pred HHHHHHHHhCCCEEEEeEEEE-e--cC---C--E-EEEEeC---CCceEEEEcCEEEECCCCC
Confidence 345667788899999998764 3 33 2 1 233332 56 689999999998853
No 256
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=50.54 E-value=9.5 Score=32.04 Aligned_cols=39 Identities=13% Similarity=0.011 Sum_probs=29.2
Q ss_pred hCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
+.|+ +..+..|.++..+ ++.+. +|+++++|.||.++...
T Consensus 246 ~~g~-i~~~~~v~~~~~~----------~v~~~---~g~~i~~D~vi~a~G~~ 284 (357)
T 4a9w_A 246 ARGV-LAAVPPPARFSPT----------GMQWA---DGTERAFDAVIWCTGFR 284 (357)
T ss_dssp HTTC-CCEECCCSEEETT----------EEECT---TSCEEECSEEEECCCBC
T ss_pred hcCc-eEEecCcceEeCC----------eeEEC---CCCEecCCEEEECCCcC
Confidence 4555 7788888887532 36665 88999999999998864
No 257
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=48.67 E-value=14 Score=34.01 Aligned_cols=47 Identities=15% Similarity=0.158 Sum_probs=34.6
Q ss_pred HHHHHHHhCCcEEE--cCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 52 PIRKYITDKGGRFH--LRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 52 ~l~~~l~~~Gg~i~--~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
...+.+.+-++++. .+++|++|. + .||++. + +.+++|.||.|+....
T Consensus 343 ~y~~~~~~~~v~lv~~~~~~i~~i~--~--------~gv~~~---d-~~~~~D~ii~atG~~~ 391 (542)
T 1w4x_A 343 DYYEMFNRDNVHLVDTLSAPIETIT--P--------RGVRTS---E-REYELDSLVLATGFDA 391 (542)
T ss_dssp SHHHHTTSTTEEEEETTTSCEEEEC--S--------SEEEES---S-CEEECSEEEECCCCCC
T ss_pred cHHHHhCCCCEEEEecCCCCceEEc--C--------CeEEeC---C-eEEecCEEEEcCCccc
Confidence 34555566678776 478899984 2 257775 6 8899999999999764
No 258
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=47.81 E-value=20 Score=32.50 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=32.3
Q ss_pred hCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCChh
Q 025358 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (254)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~~ 111 (254)
+.|++++++++|.+|..++ + .+.-.... +|+ .+.+|++|+|+...
T Consensus 172 ~~~v~~~~~~~v~~i~~~~---~--~~~~~~~~---~~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 172 NENTKIYLETSALGVFDKG---E--YFLVPVVR---GDKLIEILAKRVVLATGAI 218 (493)
T ss_dssp CTTEEEETTEEECCCEECS---S--SEEEEEEE---TTEEEEEEESCEEECCCEE
T ss_pred hcCCEEEcCCEEEEEEcCC---c--EEEEEEec---CCeEEEEECCEEEECCCCC
Confidence 5699999999999998765 2 23222222 454 68899999998753
No 259
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=47.14 E-value=21 Score=31.94 Aligned_cols=49 Identities=12% Similarity=0.055 Sum_probs=33.6
Q ss_pred HHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eE------EEcCEEEEcCChhh
Q 025358 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KV------VQADAYVAACDVPG 112 (254)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~------~~aD~VV~a~p~~~ 112 (254)
.+.+.+++.|++++.++.+.. +. + -..|.+. +| +. +.+|++|.|+....
T Consensus 101 ~~~~~~~~~gv~~~~g~~~~~---~~---~---~v~V~~~---~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 101 GIELLFKKNKVTYYKGNGSFE---DE---T---KIRVTPV---DGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp HHHHHHHHTTCEEEESEEEES---SS---S---EEEEECC---TTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHhCCCEEEEEEEEEc---cC---C---eEEEEec---CCCcccccccceEEeCEEEECcCCCC
Confidence 356677889999999997752 32 2 2234433 45 46 89999999998643
No 260
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=44.30 E-value=13 Score=31.75 Aligned_cols=43 Identities=14% Similarity=0.079 Sum_probs=34.6
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~ 112 (254)
.+...|.+.++++|++|+. ++|++|. . . . + .||.||.|+..+.
T Consensus 143 ~~~~~l~~~~~~~G~~i~~-~~v~~l~--~------~------~------~-~a~~VV~A~G~~s 185 (363)
T 1c0p_A 143 KYCQYLARELQKLGATFER-RTVTSLE--Q------A------F------D-GADLVVNATGLGA 185 (363)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCSBGG--G------T------C------S-SCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEE-EEcccHh--h------c------C------c-CCCEEEECCCcch
Confidence 5788999999999999998 8888872 1 1 0 1 6999999998876
No 261
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=44.16 E-value=27 Score=31.19 Aligned_cols=48 Identities=8% Similarity=0.018 Sum_probs=33.2
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCCh
Q 025358 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~ 110 (254)
+.+.+.+++.|++++.++.+. + +. + . ..|.+. +| +.+.+|++|.|+..
T Consensus 97 ~~~~~~~~~~~v~~~~g~~~~-i--~~---~--~-~~v~~~---~G~~~~~~~d~lviAtG~ 146 (468)
T 2qae_A 97 GGVEYLFKKNKVTYYKGEGSF-E--TA---H--S-IRVNGL---DGKQEMLETKKTIIATGS 146 (468)
T ss_dssp HHHHHHHHHHTCEEEEEEEEE-E--ET---T--E-EEEEET---TSCEEEEEEEEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEEEEEE-e--eC---C--E-EEEEec---CCceEEEEcCEEEECCCC
Confidence 345677788899999998653 3 33 2 1 234443 66 68999999999885
No 262
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=43.27 E-value=28 Score=31.20 Aligned_cols=48 Identities=10% Similarity=0.020 Sum_probs=32.5
Q ss_pred HHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC------------eEEEcCEEEEcCChh
Q 025358 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK------------KVVQADAYVAACDVP 111 (254)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g------------~~~~aD~VV~a~p~~ 111 (254)
.+.+.+++.|++++.++.+. .++ + . ..|... +| +.+.+|.+|.|+...
T Consensus 100 ~~~~~~~~~gv~~~~g~~~~---~~~---~--~-v~v~~~---~g~~~~~~~~~g~~~~i~ad~lViAtGs~ 159 (482)
T 1ojt_A 100 GLAGMAKSRKVDVIQGDGQF---LDP---H--H-LEVSLT---AGDAYEQAAPTGEKKIVAFKNCIIAAGSR 159 (482)
T ss_dssp HHHHHHHHTTCEEEEEEEEE---EET---T--E-EEEEEE---EEEETTEEEEEEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHhCCcEEEeeEEEE---ccC---C--E-EEEEec---CCcccccccccCcceEEEcCEEEECCCCC
Confidence 35567788999999998664 232 2 2 234333 34 578999999998864
No 263
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=38.57 E-value=63 Score=26.55 Aligned_cols=53 Identities=15% Similarity=-0.036 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChh
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~ 111 (254)
.+.....+...+.+..++.+..+....... . . +... +++++++|++|+|+...
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~-~~~~---~~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 63 DLSTKMFEHAKKFGAVYQYGDIKSVEDKGE---Y----K-VINF---GNKELTAKAVIIATGAE 115 (312)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEEECSS---C----E-EEEC---SSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhhccccccceeeeeeeeeec---c----e-eecc---CCeEEEeceeEEcccCc
Confidence 356677788888999999998888776654 2 1 2233 78899999999999853
No 264
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=38.22 E-value=29 Score=30.96 Aligned_cols=48 Identities=8% Similarity=-0.128 Sum_probs=33.1
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeE--EEcCEEEEcCCh
Q 025358 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKV--VQADAYVAACDV 110 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~--~~aD~VV~a~p~ 110 (254)
..+.+.+++.|++++.+ +|+.+..+ -..|... +|+. +.+|++|+|+..
T Consensus 93 ~~~~~~~~~~~v~~~~g-~v~~id~~--------~~~V~~~---~g~~~~~~~d~lviAtG~ 142 (466)
T 3l8k_A 93 QHKRNMSQYETLTFYKG-YVKIKDPT--------HVIVKTD---EGKEIEAETRYMIIASGA 142 (466)
T ss_dssp HHHHHHTTCTTEEEESE-EEEEEETT--------EEEEEET---TSCEEEEEEEEEEECCCE
T ss_pred chHHHHHHhCCCEEEEe-EEEEecCC--------eEEEEcC---CCcEEEEecCEEEECCCC
Confidence 44455566779999888 57766422 1335443 6777 999999999875
No 265
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=38.21 E-value=32 Score=31.00 Aligned_cols=54 Identities=13% Similarity=-0.019 Sum_probs=33.5
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCCh
Q 025358 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~ 110 (254)
+.+.+.+++.|++++.++ ++.+...++.++ +-..|... +|+ .+.+|.+|.|+..
T Consensus 99 ~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~--~~~~V~~~---~g~~~~~~~d~lviATGs 154 (499)
T 1xdi_A 99 ADITAQLLSMGVQVIAGR-GELIDSTPGLAR--HRIKATAA---DGSTSEHEADVVLVATGA 154 (499)
T ss_dssp HHHHHHHHHTTCEEEESE-EEECCSSSCCSS--EEEEEECT---TSCEEEEEESEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeE-EEEecCcccCCC--CEEEEEeC---CCcEEEEEeCEEEEcCCC
Confidence 345677888999999997 665544200001 11223332 565 7899999999874
No 266
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=34.79 E-value=33 Score=30.72 Aligned_cols=47 Identities=15% Similarity=0.150 Sum_probs=31.5
Q ss_pred HHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEEcCEEEEcCCh
Q 025358 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (254)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~--~~~aD~VV~a~p~ 110 (254)
.+.+.+++.|++++.++ ++.+ +. + . ..|... +|+ .+.+|.+|+|+..
T Consensus 110 ~~~~~~~~~gv~~~~g~-~~~i--~~---~--~-~~v~~~---~g~~~~~~~d~lviAtGs 158 (479)
T 2hqm_A 110 IYQKNLEKEKVDVVFGW-ARFN--KD---G--N-VEVQKR---DNTTEVYSANHILVATGG 158 (479)
T ss_dssp HHHHHHHHTTEEEEEEE-EEEC--TT---S--C-EEEEES---SSCCEEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEeE-EEEe--eC---C--E-EEEEeC---CCcEEEEEeCEEEEcCCC
Confidence 34556778899999885 5544 33 2 2 234443 565 7899999999875
No 267
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=33.96 E-value=57 Score=29.42 Aligned_cols=48 Identities=25% Similarity=0.335 Sum_probs=31.1
Q ss_pred HHHHHHHhC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCC-----CeEEEcCEEEEcCCh
Q 025358 52 PIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATD-----KKVVQADAYVAACDV 110 (254)
Q Consensus 52 ~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~-----g~~~~aD~VV~a~p~ 110 (254)
.+.+.+++. |++++.++ ++.+ +. . .|.+....+ |+.+.+|++|+|+..
T Consensus 112 ~~~~~l~~~~gv~~~~g~-~~~i--~~---~-----~v~v~~~~~~~~~~~~~~~~d~lViATGs 165 (495)
T 2wpf_A 112 SYEGMFNDTEGLDFFLGW-GSLE--SK---N-----VVVVRETADPKSAVKERLQADHILLATGS 165 (495)
T ss_dssp HHHHHHHHCTTEEEEESE-EEEE--ET---T-----EEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred HHHHHHhcCCCeEEEEeE-EEEe--eC---C-----EEEEeecCCccCCCCeEEEcCEEEEeCCC
Confidence 344556778 99999986 5554 22 2 244431113 678999999999875
No 268
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=33.82 E-value=79 Score=28.00 Aligned_cols=43 Identities=12% Similarity=0.268 Sum_probs=31.2
Q ss_pred HHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
+.+.+++.|++++.++.+. + ++ . .|.+. ++.+.+|++|+|+..
T Consensus 102 ~~~~~~~~gv~~~~g~~~~-~--~~---~-----~v~v~----~~~~~~d~lviATGs 144 (458)
T 1lvl_A 102 VAALLKKHGVKVVHGWAKV-L--DG---K-----QVEVD----GQRIQCEHLLLATGS 144 (458)
T ss_dssp HHHHHHHTTCEEECSCEEE-E--ET---T-----EEEET----TEEEECSEEEECCCE
T ss_pred HHHHHHhCCcEEEEEEEEE-c--cC---C-----EEEEe----eEEEEeCEEEEeCCC
Confidence 4467788999999998764 2 32 2 25553 478999999999975
No 269
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=33.41 E-value=67 Score=31.86 Aligned_cols=57 Identities=9% Similarity=-0.026 Sum_probs=37.7
Q ss_pred hHHHHHHHHHhC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeec------------CCCeEEEcCEEEEcCChh
Q 025358 49 LSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKA------------TDKKVVQADAYVAACDVP 111 (254)
Q Consensus 49 l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~------------~~g~~~~aD~VV~a~p~~ 111 (254)
+.+.+.+.+++. |++++++++|.+|...+ ++..+....+ .++..+.+|++|+|+...
T Consensus 183 ~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~------~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~ 252 (965)
T 2gag_A 183 WIEQVTSELAEAEETTHLQRTTVFGSYDAN------YLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAH 252 (965)
T ss_dssp HHHHHHHHHHHSTTEEEESSEEEEEEETTT------EEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHhhcCCcEEEeCCEEEeeecCC------ceeeeEeecccccccccccCCCCceEEEECCEEEECCCCc
Confidence 445666677775 99999999999987543 3433321100 122468899999999864
No 270
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=33.33 E-value=62 Score=28.76 Aligned_cols=43 Identities=7% Similarity=0.112 Sum_probs=30.9
Q ss_pred HHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
+.+.+++.|++++.++.+. + +. . .|.+ +|+.+++|++|.|+..
T Consensus 99 ~~~~~~~~gv~~~~g~~~~-~--~~---~-----~v~v----~g~~~~~d~lViATGs 141 (464)
T 2eq6_A 99 VGTLLKGNGVELLRGFARL-V--GP---K-----EVEV----GGERYGAKSLILATGS 141 (464)
T ss_dssp HHHHHHHTTCEEEESCEEE-E--ET---T-----EEEE----TTEEEEEEEEEECCCE
T ss_pred HHHHHHhCCCEEEeeeEEE-c--cC---C-----EEEE----ccEEEEeCEEEEcCCC
Confidence 4556788999999997653 3 32 2 2445 3678999999999885
No 271
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=31.09 E-value=32 Score=30.83 Aligned_cols=29 Identities=14% Similarity=0.050 Sum_probs=20.8
Q ss_pred EEEEeecCCCeEEEcCEEEEcCChhhHhhcCC
Q 025358 87 GLAMSKATDKKVVQADAYVAACDVPGIKRLLP 118 (254)
Q Consensus 87 gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll~ 118 (254)
+|.+. +|+++++|.||.++....-..+|+
T Consensus 254 ~V~~~---dG~~i~~D~Vi~atG~~p~~~~l~ 282 (464)
T 2xve_A 254 NAYFA---DGSSEKVDAIILCTGYIHHFPFLN 282 (464)
T ss_dssp EEEET---TSCEEECSEEEECCCBCCCCTTBC
T ss_pred EEEEC---CCCEEeCCEEEECCCCCCCCCCcC
Confidence 36665 888999999999998653333444
No 272
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=30.58 E-value=69 Score=28.43 Aligned_cols=48 Identities=13% Similarity=0.065 Sum_probs=32.2
Q ss_pred HHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCC-C-eEEEcCEEEEcCChh
Q 025358 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATD-K-KVVQADAYVAACDVP 111 (254)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~-g-~~~~aD~VV~a~p~~ 111 (254)
.+.+.+++.|++++.++.+ .+ +. + + ..|.+. + | +.+.+|++|.|+...
T Consensus 102 ~~~~~~~~~gv~~~~g~~~-~~--~~---~--~-~~v~~~---~gg~~~~~~d~lViAtGs~ 151 (474)
T 1zmd_A 102 GIAHLFKQNKVVHVNGYGK-IT--GK---N--Q-VTATKA---DGGTQVIDTKNILIATGSE 151 (474)
T ss_dssp HHHHHHHHTTCEEEESEEE-EE--ET---T--E-EEEECT---TSCEEEEEEEEEEECCCEE
T ss_pred HHHHHHHhCCCEEEEEEEE-Ee--cC---C--E-EEEEec---CCCcEEEEeCEEEECCCCC
Confidence 3467778899999999754 23 32 2 1 234332 4 4 579999999999853
No 273
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=30.16 E-value=85 Score=27.85 Aligned_cols=44 Identities=18% Similarity=0.105 Sum_probs=30.4
Q ss_pred HHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
.+.+.+++.|++++.++. +.+ +. . .|.+ +|+.+.+|.+|.|+..
T Consensus 97 ~~~~~~~~~gv~~~~g~~-~~i--~~---~-----~v~~----~g~~~~~d~lviAtGs 140 (463)
T 2r9z_A 97 FWDGYVERLGITRVDGHA-RFV--DA---H-----TIEV----EGQRLSADHIVIATGG 140 (463)
T ss_dssp HHHHHHHHTTCEEEESCE-EEE--ET---T-----EEEE----TTEEEEEEEEEECCCE
T ss_pred HHHHHHHHCCCEEEEeEE-EEc--cC---C-----EEEE----CCEEEEcCEEEECCCC
Confidence 345556788999999853 333 22 2 2444 5778999999999885
No 274
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=29.45 E-value=58 Score=28.88 Aligned_cols=44 Identities=11% Similarity=-0.011 Sum_probs=29.6
Q ss_pred HHHHhC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCCh
Q 025358 55 KYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (254)
Q Consensus 55 ~~l~~~-Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~ 110 (254)
+.+++. |++++.++ ++.+. . + . ..|.+. +| +.+++|++|.|+..
T Consensus 102 ~~~~~~~~v~~~~g~-~~~~~--~---~--~-~~v~~~---~g~~~~~~~d~lviAtGs 148 (467)
T 1zk7_A 102 GILGGNPAITVVHGE-ARFKD--D---Q--S-LTVRLN---EGGERVVMFDRCLVATGA 148 (467)
T ss_dssp HHHTTCTTEEEEEEE-EEEEE--T---T--E-EEEEET---TSSEEEEECSEEEECCCE
T ss_pred HHHhccCCeEEEEEE-EEEcc--C---C--E-EEEEeC---CCceEEEEeCEEEEeCCC
Confidence 445566 99998874 66553 2 2 1 234443 66 67999999999885
No 275
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=27.73 E-value=1.3e+02 Score=20.31 Aligned_cols=40 Identities=10% Similarity=0.169 Sum_probs=24.8
Q ss_pred EEEEeecCCCCCCCCHHHHHHHHHHHHc--CCCCCcceeeee
Q 025358 201 LQCVLTPGDPYMPLPNDEIIRRVAKQVG--FSSISIIPRFRS 240 (254)
Q Consensus 201 ~~~~~~~~~~~~~~~~eei~~~v~~~L~--~P~~~~~~~~~~ 240 (254)
+++++.....+-.-.-+.|.+.+.++|. ||+++...+|+.
T Consensus 3 VEi~~dK~~~lp~ga~~aL~~EL~kRl~~~fpd~~~~V~Vr~ 44 (81)
T 1ghh_A 3 IEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRY 44 (81)
T ss_dssp EEEEEETTSCCCTTHHHHHHHHHHHHHHHHCSSSCCEEEEEE
T ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHhhCCCCCceEEEee
Confidence 4555544322222335888888999998 999744556553
No 276
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=26.45 E-value=84 Score=28.18 Aligned_cols=48 Identities=10% Similarity=0.141 Sum_probs=31.2
Q ss_pred HHHHHHHhC-CcEEEcCceeeEEEeccCCCCcceEEEEEEee--cCCC---eEEEcCEEEEcCCh
Q 025358 52 PIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDK---KVVQADAYVAACDV 110 (254)
Q Consensus 52 ~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~--~~~g---~~~~aD~VV~a~p~ 110 (254)
.+.+.+++. |++++.++ ++.+. . . .+.+.. +.+| +.+.+|++|.|+..
T Consensus 108 ~~~~~l~~~~gv~~~~g~-~~~i~--~---~-----~v~v~~~~~~~g~~~~~~~~d~lviAtGs 161 (490)
T 1fec_A 108 SYEGMFADTEGLTFHQGF-GALQD--N---H-----TVLVRESADPNSAVLETLDTEYILLATGS 161 (490)
T ss_dssp HHHHHHHTSTTEEEEESE-EEEEE--T---T-----EEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred HHHHHHhcCCCcEEEEeE-EEEee--C---C-----EEEEEeeccCCCCceEEEEcCEEEEeCCC
Confidence 445566778 99999996 55552 2 2 233421 0145 67999999999875
No 277
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=25.61 E-value=1.1e+02 Score=26.97 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=30.4
Q ss_pred HHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
.+.+.+++.|++++.++. +.+ +. . .|.+ +|+.+.+|.+|.|+..
T Consensus 98 ~~~~~~~~~~v~~~~g~~-~~i--~~---~-----~v~~----~g~~~~~d~lviAtGs 141 (450)
T 1ges_A 98 SYENVLGKNNVDVIKGFA-RFV--DA---K-----TLEV----NGETITADHILIATGG 141 (450)
T ss_dssp HHHHHHHHTTCEEEESCC-EEE--ET---T-----EEEE----TTEEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEeEE-EEe--cC---C-----EEEE----CCEEEEeCEEEECCCC
Confidence 344556788999999864 344 22 2 2444 5778999999999875
No 278
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=24.89 E-value=29 Score=31.52 Aligned_cols=17 Identities=24% Similarity=0.274 Sum_probs=15.5
Q ss_pred CCeEEEcCEEEEcCChh
Q 025358 95 DKKVVQADAYVAACDVP 111 (254)
Q Consensus 95 ~g~~~~aD~VV~a~p~~ 111 (254)
+|+++++|+||+||...
T Consensus 392 dg~~~~~D~VI~ATGy~ 408 (501)
T 4b63_A 392 VKETLEVDALMVATGYN 408 (501)
T ss_dssp CCCEEEESEEEECCCEE
T ss_pred CCeEEECCEEEECcCCC
Confidence 78899999999999974
No 279
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=24.24 E-value=76 Score=27.97 Aligned_cols=46 Identities=9% Similarity=0.008 Sum_probs=31.5
Q ss_pred HHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
.+.+.+++.|++++.++.+. .+. + .+.+.. +|+.+.+|++|.|+..
T Consensus 94 ~~~~~~~~~~v~~~~g~~~~---i~~---~-----~~~v~~--~g~~~~~d~lviAtG~ 139 (455)
T 2yqu_A 94 GVEFLFKKNGIARHQGTARF---LSE---R-----KVLVEE--TGEELEARYILIATGS 139 (455)
T ss_dssp HHHHHHHHHTCEEEESCEEE---SSS---S-----EEEETT--TCCEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEeEEEE---ecC---C-----eEEEee--CCEEEEecEEEECCCC
Confidence 34567778899999987542 332 2 244421 4678999999999875
No 280
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=23.51 E-value=55 Score=28.84 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=17.2
Q ss_pred EEEEeecCCCeE-EEcCEEEEcCChh
Q 025358 87 GLAMSKATDKKV-VQADAYVAACDVP 111 (254)
Q Consensus 87 gv~l~~~~~g~~-~~aD~VV~a~p~~ 111 (254)
+|.+. +|+. +++|.||.++...
T Consensus 269 ~v~~~---dG~~~~~~D~vi~atG~~ 291 (447)
T 2gv8_A 269 EIYLK---GGKVLSNIDRVIYCTGYL 291 (447)
T ss_dssp EEEET---TTEEECCCSEEEECCCBC
T ss_pred EEEEC---CCCEeccCCEEEECCCCC
Confidence 46665 7876 6899999999864
No 281
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=22.98 E-value=16 Score=28.59 Aligned_cols=46 Identities=11% Similarity=0.055 Sum_probs=31.1
Q ss_pred ceEEEEEee--cCCCCCCCCHHHHHHHHHHHHc--C-CCCCcceeeeee--eEEee
Q 025358 198 GSLLQCVLT--PGDPYMPLPNDEIIRRVAKQVG--F-SSISIIPRFRSY--LVVCC 246 (254)
Q Consensus 198 ~~~~~~~~~--~~~~~~~~~~eei~~~v~~~L~--~-P~~~~~~~~~~~--~v~~~ 246 (254)
+.++..++. .+..+..++++++++.++++|. | |++ ..++++ .+.+|
T Consensus 36 ~~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~~---~~~~~~~~~~~~W 88 (181)
T 2e1m_C 36 GVVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRRI---EVFYTGAGQTQSW 88 (181)
T ss_dssp EEEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGGG---GGTEEEEEEEEES
T ss_pred CEEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCCc---HhhccCcceeccc
Confidence 346666653 2356677899999999999998 6 664 344455 66663
No 282
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=21.21 E-value=1.6e+02 Score=26.20 Aligned_cols=48 Identities=10% Similarity=-0.015 Sum_probs=31.4
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCCh
Q 025358 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~ 110 (254)
+.+...+++.|++++.+..+. .+. + ...|... +| +.+.+|++|+|+..
T Consensus 119 ~~~~~~~~~~~v~~~~g~~~~---~~~---~---~~~v~~~---~g~~~~~~~d~lViATGs 168 (491)
T 3urh_A 119 DGVSFLFKKNKIDGFQGTGKV---LGQ---G---KVSVTNE---KGEEQVLEAKNVVIATGS 168 (491)
T ss_dssp HHHHHHHHHTTCEEEESEEEE---CSS---S---EEEEECT---TSCEEEEECSEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEEEEEE---ecC---C---EEEEEeC---CCceEEEEeCEEEEccCC
Confidence 345566788899998887543 232 2 2234332 55 57899999999874
No 283
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=21.16 E-value=1.1e+02 Score=27.67 Aligned_cols=39 Identities=15% Similarity=0.111 Sum_probs=29.7
Q ss_pred HhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 58 TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
++.|++++++.+|+.+.. . .|.+ +|+.+.+|.+|.|+..
T Consensus 146 ~~~gv~~~~~~~v~~i~~-----~-----~v~~----~g~~~~~d~lViATGs 184 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVIDN-----H-----TVEA----AGKVFKAKNLILAVGA 184 (523)
T ss_dssp HTSCCCEEESSCCEEEET-----T-----EEEE----TTEEEEBSCEEECCCE
T ss_pred ccCCcEEEEeeEEEEeeC-----C-----EEEE----CCEEEEeCEEEECCCC
Confidence 778999997888887742 2 2444 4778999999999885
No 284
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=20.69 E-value=1.3e+02 Score=26.67 Aligned_cols=47 Identities=9% Similarity=-0.066 Sum_probs=30.7
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCCh
Q 025358 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~ 110 (254)
+.+...++..|++++.++ ++.+ +. . . ..|.. +|+.+.+|++|+|+..
T Consensus 112 ~~~~~~~~~~gv~~~~g~-~~~~--~~---~--~-~~v~~----~g~~~~~d~lviAtG~ 158 (478)
T 3dk9_A 112 AIYQNNLTKSHIEIIRGH-AAFT--SD---P--K-PTIEV----SGKKYTAPHILIATGG 158 (478)
T ss_dssp HHHHHHHHHTTCEEEESC-EEEC--SC---S--S-CEEEE----TTEEEECSCEEECCCE
T ss_pred HHHHHHHHhCCcEEEEeE-EEEe--eC---C--e-EEEEE----CCEEEEeeEEEEccCC
Confidence 445566778899998885 2222 22 1 1 22432 6888999999999874
No 285
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=20.53 E-value=43 Score=28.74 Aligned_cols=50 Identities=16% Similarity=-0.027 Sum_probs=38.0
Q ss_pred hhHHHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEEcCEEEEcCChhhHhhcC
Q 025358 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLL 117 (254)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g~~~~aD~VV~a~p~~~~~~Ll 117 (254)
.+.+.|.+.+++.|++|+++++|++|... .+++||.||.|...+..++.+
T Consensus 99 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--------------------~~~~ad~vV~AdG~~S~R~~l 148 (381)
T 3c4a_A 99 GLVHALRDKCRSQGIAIRFESPLLEHGEL--------------------PLADYDLVVLANGVNHKTAHF 148 (381)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCSGGGC--------------------CGGGCSEEEECCGGGGGTCCS
T ss_pred HHHHHHHHHHHHCCCEEEeCCEeccchhc--------------------ccccCCEEEECCCCCchHHhh
Confidence 57888899999999999999999887311 023689999998876445444
No 286
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=20.41 E-value=88 Score=27.72 Aligned_cols=48 Identities=15% Similarity=0.194 Sum_probs=31.4
Q ss_pred HHHHHHHHhCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEEcCEEEEcCCh
Q 025358 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (254)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~g~~~v~gv~l~~~~~g--~~~~aD~VV~a~p~ 110 (254)
+.+...+++.|++++.++.+. .+. + ...|... +| +.+.+|++|+|+..
T Consensus 103 ~~~~~~~~~~~v~~~~g~~~~---~~~---~---~~~v~~~---~g~~~~~~~d~lvlAtG~ 152 (476)
T 3lad_A 103 GGVASLIKANGVTLFEGHGKL---LAG---K---KVEVTAA---DGSSQVLDTENVILASGS 152 (476)
T ss_dssp HHHHHHHHHHTCEEEESEEEE---CST---T---CEEEECT---TSCEEEECCSCEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeEEEE---ecC---C---EEEEEcC---CCceEEEEcCEEEEcCCC
Confidence 344566778899999887543 333 2 1234332 55 57899999999875
Done!