Query 025363
Match_columns 254
No_of_seqs 185 out of 2122
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 08:50:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025363.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025363hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9c_A Caffeic acid O-methyltr 100.0 1.6E-43 5.3E-48 303.3 25.5 250 1-253 106-355 (364)
2 3reo_A (ISO)eugenol O-methyltr 100.0 5.9E-43 2E-47 300.2 24.8 250 1-253 108-357 (368)
3 4a6d_A Hydroxyindole O-methylt 100.0 1.6E-43 5.4E-48 302.1 19.9 244 1-253 83-336 (353)
4 3lst_A CALO1 methyltransferase 100.0 7.6E-39 2.6E-43 272.9 23.3 243 1-253 91-338 (348)
5 1zg3_A Isoflavanone 4'-O-methy 100.0 2.8E-38 9.7E-43 270.4 20.9 249 1-254 95-350 (358)
6 1fp1_D Isoliquiritigenin 2'-O- 100.0 3.7E-38 1.3E-42 270.9 21.3 246 1-251 113-360 (372)
7 3gwz_A MMCR; methyltransferase 100.0 6E-38 2.1E-42 269.3 19.3 238 2-250 110-355 (369)
8 1fp2_A Isoflavone O-methyltran 100.0 1.8E-37 6.2E-42 264.8 22.0 246 1-253 93-343 (352)
9 3i53_A O-methyltransferase; CO 100.0 3.2E-38 1.1E-42 267.4 15.8 240 1-253 75-323 (332)
10 2ip2_A Probable phenazine-spec 100.0 2.7E-36 9.3E-41 255.7 18.7 239 1-253 78-324 (334)
11 3dp7_A SAM-dependent methyltra 100.0 9.8E-35 3.4E-39 248.8 16.0 241 1-253 86-344 (363)
12 1qzz_A RDMB, aclacinomycin-10- 100.0 1.7E-34 5.8E-39 248.3 16.5 243 1-253 88-341 (374)
13 1tw3_A COMT, carminomycin 4-O- 100.0 2.4E-34 8.3E-39 246.1 15.9 243 1-253 89-341 (360)
14 3mcz_A O-methyltransferase; ad 100.0 9.6E-33 3.3E-37 235.5 17.8 233 1-248 92-336 (352)
15 2r3s_A Uncharacterized protein 100.0 1.6E-32 5.4E-37 232.6 18.5 239 1-253 75-325 (335)
16 1x19_A CRTF-related protein; m 100.0 4.4E-32 1.5E-36 232.1 20.2 229 1-251 100-348 (359)
17 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.6E-21 5.6E-26 159.1 14.7 158 87-248 62-242 (261)
18 3dtn_A Putative methyltransfer 99.8 3.3E-20 1.1E-24 148.9 15.1 164 85-250 32-213 (234)
19 3ou2_A SAM-dependent methyltra 99.8 5.4E-19 1.8E-23 140.0 13.4 158 85-249 34-203 (218)
20 3ujc_A Phosphoethanolamine N-m 99.8 6.3E-19 2.1E-23 143.8 13.8 155 85-251 44-206 (266)
21 3dli_A Methyltransferase; PSI- 99.8 9.1E-19 3.1E-23 141.1 13.9 151 84-251 28-184 (240)
22 3hnr_A Probable methyltransfer 99.8 2.9E-19 1E-23 142.0 9.9 161 86-250 35-200 (220)
23 1vl5_A Unknown conserved prote 99.8 6E-19 2.1E-23 143.8 11.6 166 73-251 14-190 (260)
24 1xtp_A LMAJ004091AAA; SGPP, st 99.8 9E-19 3.1E-23 142.1 11.7 151 85-253 82-240 (254)
25 3vc1_A Geranyl diphosphate 2-C 99.8 2E-18 6.8E-23 144.6 13.4 162 77-251 97-269 (312)
26 3bus_A REBM, methyltransferase 99.8 1.8E-18 6.3E-23 141.8 12.3 157 84-251 49-216 (273)
27 1nkv_A Hypothetical protein YJ 99.8 2.6E-18 8.8E-23 139.6 12.6 153 84-250 24-186 (256)
28 1kpg_A CFA synthase;, cyclopro 99.8 2.7E-18 9.3E-23 141.9 12.8 162 85-251 53-228 (287)
29 3hem_A Cyclopropane-fatty-acyl 99.8 4.8E-18 1.7E-22 141.5 14.3 161 85-252 61-244 (302)
30 2ex4_A Adrenal gland protein A 99.8 1.2E-18 4.2E-23 140.4 10.1 141 96-254 78-228 (241)
31 2o57_A Putative sarcosine dime 99.8 1.5E-18 5.1E-23 144.2 10.9 154 85-251 67-234 (297)
32 3dh0_A SAM dependent methyltra 99.8 2.2E-18 7.4E-23 136.8 11.1 146 85-252 26-182 (219)
33 3h2b_A SAM-dependent methyltra 99.8 1E-18 3.5E-23 137.1 9.0 137 98-252 42-183 (203)
34 3mgg_A Methyltransferase; NYSG 99.8 8.3E-19 2.8E-23 144.2 8.1 152 94-251 34-198 (276)
35 2fk8_A Methoxy mycolic acid sy 99.8 1.1E-17 3.8E-22 140.3 14.1 163 84-251 78-254 (318)
36 3dlc_A Putative S-adenosyl-L-m 99.8 8.2E-19 2.8E-23 138.9 6.8 159 85-251 33-203 (219)
37 3f4k_A Putative methyltransfer 99.8 6.3E-18 2.2E-22 137.4 12.0 153 85-252 34-197 (257)
38 1ve3_A Hypothetical protein PH 99.7 5.6E-19 1.9E-23 140.9 5.1 107 85-197 29-144 (227)
39 1xxl_A YCGJ protein; structura 99.7 5.3E-18 1.8E-22 136.6 10.9 156 84-251 9-174 (239)
40 3e23_A Uncharacterized protein 99.7 4E-18 1.4E-22 134.6 9.8 139 95-252 41-183 (211)
41 3kkz_A Uncharacterized protein 99.7 6.2E-18 2.1E-22 138.4 11.0 153 85-252 34-197 (267)
42 3pfg_A N-methyltransferase; N, 99.7 4.1E-18 1.4E-22 139.1 9.4 102 96-200 49-156 (263)
43 2qe6_A Uncharacterized protein 99.7 1.1E-17 3.8E-22 137.4 11.7 141 96-247 76-238 (274)
44 3l8d_A Methyltransferase; stru 99.7 3E-17 1E-21 132.1 14.1 142 96-251 52-200 (242)
45 3ege_A Putative methyltransfer 99.7 2.7E-17 9.1E-22 134.2 13.6 153 84-251 22-178 (261)
46 3lcc_A Putative methyl chlorid 99.7 6.3E-18 2.1E-22 135.7 9.6 131 99-252 68-208 (235)
47 1pjz_A Thiopurine S-methyltran 99.7 1E-17 3.5E-22 131.7 10.1 140 88-251 14-176 (203)
48 3gu3_A Methyltransferase; alph 99.7 8.5E-18 2.9E-22 138.9 9.4 160 87-249 12-188 (284)
49 4fsd_A Arsenic methyltransfera 99.7 2.1E-17 7.3E-22 142.1 12.0 145 95-250 81-250 (383)
50 2p7i_A Hypothetical protein; p 99.7 1.4E-17 4.9E-22 134.3 10.3 148 96-251 41-199 (250)
51 3g2m_A PCZA361.24; SAM-depende 99.7 2E-17 6.7E-22 137.7 9.7 166 82-252 69-275 (299)
52 3g5l_A Putative S-adenosylmeth 99.7 1.8E-17 6.2E-22 134.5 9.1 158 86-250 34-215 (253)
53 4htf_A S-adenosylmethionine-de 99.7 2.3E-17 7.7E-22 136.3 9.4 159 85-253 58-234 (285)
54 3jwh_A HEN1; methyltransferase 99.7 7.1E-17 2.4E-21 128.0 11.6 143 95-247 27-188 (217)
55 3ocj_A Putative exported prote 99.7 1.6E-17 5.4E-22 138.7 8.1 154 95-250 116-290 (305)
56 3jwg_A HEN1, methyltransferase 99.7 4.9E-17 1.7E-21 129.0 10.4 143 95-247 27-188 (219)
57 3sm3_A SAM-dependent methyltra 99.7 1.4E-16 4.9E-21 127.3 13.0 150 95-250 28-206 (235)
58 2p35_A Trans-aconitate 2-methy 99.7 4.7E-17 1.6E-21 132.3 10.1 155 85-246 22-185 (259)
59 3g07_A 7SK snRNA methylphospha 99.7 1.2E-17 4.1E-22 138.6 6.2 146 96-251 45-269 (292)
60 3bkw_A MLL3908 protein, S-aden 99.7 6.6E-17 2.3E-21 130.1 10.3 160 86-251 33-214 (243)
61 3bxo_A N,N-dimethyltransferase 99.7 7.7E-17 2.6E-21 129.4 10.5 102 96-200 39-146 (239)
62 3ggd_A SAM-dependent methyltra 99.7 5.8E-17 2E-21 130.8 9.7 150 94-251 53-219 (245)
63 3ccf_A Cyclopropane-fatty-acyl 99.7 4.4E-17 1.5E-21 134.2 9.0 161 83-251 44-210 (279)
64 3i9f_A Putative type 11 methyl 99.7 1.3E-17 4.5E-22 127.1 4.7 138 88-253 9-150 (170)
65 3bkx_A SAM-dependent methyltra 99.7 3.1E-16 1.1E-20 128.6 11.6 163 85-251 32-219 (275)
66 2yqz_A Hypothetical protein TT 99.7 2.4E-16 8.3E-21 128.3 10.8 146 95-249 37-194 (263)
67 3cc8_A Putative methyltransfer 99.7 2.1E-16 7.1E-21 125.9 9.9 158 82-252 19-186 (230)
68 2xvm_A Tellurite resistance pr 99.7 2.1E-16 7.2E-21 123.2 9.5 143 86-251 22-173 (199)
69 3cgg_A SAM-dependent methyltra 99.7 5E-16 1.7E-20 120.5 10.3 133 86-251 37-175 (195)
70 3e8s_A Putative SAM dependent 99.7 6.2E-17 2.1E-21 128.7 5.2 156 87-250 43-208 (227)
71 4hg2_A Methyltransferase type 99.6 5.3E-16 1.8E-20 126.1 10.1 97 97-199 39-139 (257)
72 2p8j_A S-adenosylmethionine-de 99.6 1.7E-16 5.8E-21 124.9 6.9 149 95-248 21-180 (209)
73 3d2l_A SAM-dependent methyltra 99.6 8E-16 2.7E-20 123.7 10.7 95 96-194 32-136 (243)
74 2gb4_A Thiopurine S-methyltran 99.6 8.1E-16 2.8E-20 124.7 9.2 132 96-250 67-226 (252)
75 1y8c_A S-adenosylmethionine-de 99.6 2.8E-16 9.5E-21 126.5 6.4 95 97-194 37-141 (246)
76 2aot_A HMT, histamine N-methyl 99.6 1.3E-15 4.4E-20 126.3 9.3 143 96-248 51-218 (292)
77 1vlm_A SAM-dependent methyltra 99.6 1.6E-15 5.6E-20 120.3 9.2 137 98-251 48-188 (219)
78 3g5t_A Trans-aconitate 3-methy 99.6 1.8E-15 6.1E-20 125.8 9.8 120 72-197 13-151 (299)
79 1ri5_A MRNA capping enzyme; me 99.6 4.3E-16 1.5E-20 129.1 5.7 156 95-252 62-251 (298)
80 2zfu_A Nucleomethylin, cerebra 99.6 4.9E-15 1.7E-19 117.1 10.9 122 85-251 55-179 (215)
81 3e05_A Precorrin-6Y C5,15-meth 99.6 1.5E-14 5.2E-19 113.4 13.2 104 86-196 30-143 (204)
82 4df3_A Fibrillarin-like rRNA/T 99.6 5.9E-15 2E-19 117.5 10.1 135 94-254 74-220 (233)
83 2kw5_A SLR1183 protein; struct 99.6 1.3E-14 4.5E-19 113.5 11.1 133 97-251 30-171 (202)
84 3m70_A Tellurite resistance pr 99.6 4.3E-15 1.5E-19 122.6 8.2 142 86-250 110-259 (286)
85 2a14_A Indolethylamine N-methy 99.6 4.7E-16 1.6E-20 127.0 2.4 140 95-251 53-238 (263)
86 4e2x_A TCAB9; kijanose, tetron 99.6 2E-15 7E-20 131.1 6.3 151 84-252 95-254 (416)
87 2i62_A Nicotinamide N-methyltr 99.6 1.1E-15 3.9E-20 124.4 4.4 141 95-252 54-240 (265)
88 2g72_A Phenylethanolamine N-me 99.6 1.2E-15 4.2E-20 126.1 4.5 138 97-251 71-256 (289)
89 3thr_A Glycine N-methyltransfe 99.6 3.4E-15 1.2E-19 123.6 7.1 108 85-196 46-176 (293)
90 3q87_B N6 adenine specific DNA 99.6 4.3E-14 1.5E-18 107.8 12.0 117 96-250 22-148 (170)
91 1fbn_A MJ fibrillarin homologu 99.5 4.8E-14 1.6E-18 112.7 11.8 137 89-253 67-215 (230)
92 3giw_A Protein of unknown func 99.5 3.4E-14 1.2E-18 115.3 10.8 141 97-247 78-243 (277)
93 3uwp_A Histone-lysine N-methyl 99.5 2.4E-14 8.2E-19 121.9 10.2 113 85-202 162-295 (438)
94 3ofk_A Nodulation protein S; N 99.5 9.6E-15 3.3E-19 115.5 7.3 99 95-196 49-155 (216)
95 3mq2_A 16S rRNA methyltransfer 99.5 3.7E-14 1.3E-18 112.3 10.4 142 95-251 25-184 (218)
96 3p2e_A 16S rRNA methylase; met 99.5 2E-14 6.9E-19 114.6 8.3 144 96-251 23-185 (225)
97 1af7_A Chemotaxis receptor met 99.5 7.6E-14 2.6E-18 114.1 11.8 97 97-194 105-251 (274)
98 3hm2_A Precorrin-6Y C5,15-meth 99.5 2.6E-14 8.9E-19 109.3 8.3 101 87-196 16-128 (178)
99 2gs9_A Hypothetical protein TT 99.5 3E-14 1E-18 112.1 8.9 130 97-242 36-171 (211)
100 3orh_A Guanidinoacetate N-meth 99.5 2.7E-15 9.4E-20 120.5 1.1 134 96-249 59-208 (236)
101 2b3t_A Protein methyltransfera 99.5 1.3E-13 4.5E-18 113.2 11.0 132 85-250 99-262 (276)
102 3grz_A L11 mtase, ribosomal pr 99.5 2.6E-14 9E-19 112.1 6.4 120 95-251 58-185 (205)
103 1zx0_A Guanidinoacetate N-meth 99.5 1.1E-14 3.7E-19 117.0 3.6 100 96-197 59-172 (236)
104 3iv6_A Putative Zn-dependent a 99.5 5.6E-14 1.9E-18 114.0 7.7 108 84-196 33-149 (261)
105 1wzn_A SAM-dependent methyltra 99.5 1.5E-13 5.3E-18 111.0 9.8 107 85-195 30-145 (252)
106 4dzr_A Protein-(glutamine-N5) 99.5 1.2E-14 4.2E-19 114.3 3.0 111 85-196 18-165 (215)
107 3bgv_A MRNA CAP guanine-N7 met 99.5 9.8E-14 3.3E-18 116.0 8.1 100 96-197 33-157 (313)
108 3njr_A Precorrin-6Y methylase; 99.5 4.3E-13 1.5E-17 105.3 10.8 122 87-249 46-178 (204)
109 2pxx_A Uncharacterized protein 99.4 1.6E-13 5.6E-18 107.9 8.1 102 95-198 40-162 (215)
110 1nt2_A Fibrillarin-like PRE-rR 99.4 6.2E-13 2.1E-17 104.8 10.9 95 95-194 55-160 (210)
111 3htx_A HEN1; HEN1, small RNA m 99.4 4.1E-13 1.4E-17 122.5 10.6 101 95-197 719-836 (950)
112 1yb2_A Hypothetical protein TA 99.4 8.7E-14 3E-18 114.3 5.8 102 86-196 100-212 (275)
113 3m33_A Uncharacterized protein 99.4 6E-14 2.1E-18 111.8 4.5 113 96-250 47-166 (226)
114 3id6_C Fibrillarin-like rRNA/T 99.4 1.5E-12 5E-17 103.8 12.3 143 85-253 62-218 (232)
115 3evz_A Methyltransferase; NYSG 99.4 4.3E-13 1.5E-17 107.0 9.2 128 95-253 53-208 (230)
116 1dus_A MJ0882; hypothetical pr 99.4 7E-13 2.4E-17 102.5 9.5 108 85-197 41-159 (194)
117 2pjd_A Ribosomal RNA small sub 99.4 2.2E-13 7.4E-18 115.4 6.8 111 85-197 185-305 (343)
118 1g8a_A Fibrillarin-like PRE-rR 99.4 1.9E-12 6.5E-17 103.1 11.9 132 95-253 71-214 (227)
119 3fpf_A Mtnas, putative unchara 99.4 3.4E-13 1.2E-17 110.6 7.7 97 94-196 119-223 (298)
120 3mti_A RRNA methylase; SAM-dep 99.4 4.6E-13 1.6E-17 103.2 8.0 100 95-197 20-137 (185)
121 3mb5_A SAM-dependent methyltra 99.4 2.2E-13 7.5E-18 110.4 6.3 129 84-251 81-222 (255)
122 3fzg_A 16S rRNA methylase; met 99.4 8.9E-14 3E-18 106.2 3.2 95 96-195 48-152 (200)
123 4dcm_A Ribosomal RNA large sub 99.4 5.7E-13 1.9E-17 114.0 8.5 108 86-195 212-334 (375)
124 1jg1_A PIMT;, protein-L-isoasp 99.4 2.5E-13 8.7E-18 108.8 5.6 102 84-196 79-190 (235)
125 1xdz_A Methyltransferase GIDB; 99.4 1.4E-13 4.8E-18 110.7 3.8 121 95-250 68-201 (240)
126 3hp7_A Hemolysin, putative; st 99.4 1.9E-12 6.5E-17 106.3 10.6 148 85-250 73-231 (291)
127 2ipx_A RRNA 2'-O-methyltransfe 99.4 4.9E-13 1.7E-17 107.0 6.6 132 95-252 75-218 (233)
128 3bwc_A Spermidine synthase; SA 99.4 4.4E-13 1.5E-17 111.6 6.5 129 96-251 94-240 (304)
129 2h00_A Methyltransferase 10 do 99.4 4.4E-14 1.5E-18 114.6 0.3 144 97-251 65-238 (254)
130 2nxc_A L11 mtase, ribosomal pr 99.4 3.4E-13 1.1E-17 109.5 5.5 118 96-251 119-244 (254)
131 1u2z_A Histone-lysine N-methyl 99.4 3.4E-12 1.2E-16 110.4 11.8 112 85-201 231-365 (433)
132 3eey_A Putative rRNA methylase 99.4 4.6E-13 1.6E-17 104.2 5.7 103 95-198 20-142 (197)
133 1l3i_A Precorrin-6Y methyltran 99.4 6.6E-13 2.2E-17 102.4 6.5 101 87-196 24-135 (192)
134 2vdw_A Vaccinia virus capping 99.4 3.8E-13 1.3E-17 111.8 5.4 98 97-196 48-170 (302)
135 3b3j_A Histone-arginine methyl 99.4 7.4E-13 2.5E-17 116.6 7.4 107 84-193 146-261 (480)
136 3tfw_A Putative O-methyltransf 99.4 7.7E-13 2.6E-17 107.0 6.9 99 95-199 61-174 (248)
137 3lpm_A Putative methyltransfer 99.4 1.8E-12 6.3E-17 105.4 9.0 125 94-251 45-201 (259)
138 3kr9_A SAM-dependent methyltra 99.3 3.4E-12 1.2E-16 101.0 9.2 118 95-249 13-141 (225)
139 3dxy_A TRNA (guanine-N(7)-)-me 99.3 4.6E-13 1.6E-17 106.2 4.1 97 97-195 34-150 (218)
140 3opn_A Putative hemolysin; str 99.3 1.8E-12 6E-17 103.7 7.6 145 86-250 26-183 (232)
141 2yxd_A Probable cobalt-precorr 99.3 2.5E-12 8.6E-17 98.4 8.1 99 86-196 25-132 (183)
142 3g89_A Ribosomal RNA small sub 99.3 3E-13 1E-17 109.4 3.0 95 95-196 78-185 (249)
143 2pwy_A TRNA (adenine-N(1)-)-me 99.3 1.7E-12 5.8E-17 105.2 7.5 115 73-196 69-199 (258)
144 1o9g_A RRNA methyltransferase; 99.3 3.5E-12 1.2E-16 103.1 9.2 110 86-197 41-216 (250)
145 2avn_A Ubiquinone/menaquinone 99.3 1E-12 3.4E-17 106.9 5.6 97 97-197 54-154 (260)
146 1ej0_A FTSJ; methyltransferase 99.3 5E-12 1.7E-16 96.1 8.9 107 87-198 12-139 (180)
147 2fca_A TRNA (guanine-N(7)-)-me 99.3 2.8E-12 9.5E-17 101.3 7.5 97 97-195 38-153 (213)
148 1yzh_A TRNA (guanine-N(7)-)-me 99.3 6.4E-12 2.2E-16 99.2 9.6 98 97-195 41-156 (214)
149 3lbf_A Protein-L-isoaspartate 99.3 2.8E-12 9.6E-17 100.8 7.3 101 85-197 66-176 (210)
150 2plw_A Ribosomal RNA methyltra 99.3 1.5E-11 5E-16 95.9 11.3 104 87-195 12-154 (201)
151 3lec_A NADB-rossmann superfami 99.3 8.2E-12 2.8E-16 99.0 9.8 118 95-249 19-147 (230)
152 1o54_A SAM-dependent O-methylt 99.3 1.4E-12 4.6E-17 107.2 5.5 103 85-196 101-214 (277)
153 2ld4_A Anamorsin; methyltransf 99.3 2.3E-12 7.9E-17 98.5 6.4 110 94-243 9-128 (176)
154 2yxe_A Protein-L-isoaspartate 99.3 3.5E-12 1.2E-16 100.6 7.5 102 85-196 66-178 (215)
155 3p9n_A Possible methyltransfer 99.3 4E-12 1.4E-16 98.3 7.5 100 96-198 43-156 (189)
156 3u81_A Catechol O-methyltransf 99.3 1.7E-12 5.9E-17 103.0 5.1 100 96-199 57-174 (221)
157 2bm8_A Cephalosporin hydroxyla 99.3 8.1E-12 2.8E-16 100.2 9.1 93 98-196 82-188 (236)
158 2y1w_A Histone-arginine methyl 99.3 2.2E-12 7.5E-17 109.4 6.0 106 86-194 40-154 (348)
159 1jsx_A Glucose-inhibited divis 99.3 1.9E-12 6.3E-17 101.5 4.8 92 97-195 65-165 (207)
160 3ntv_A MW1564 protein; rossman 99.3 1.8E-12 6.2E-17 103.7 4.6 99 95-199 69-180 (232)
161 2frn_A Hypothetical protein PH 99.3 5.9E-12 2E-16 103.5 7.5 121 95-247 123-253 (278)
162 3gnl_A Uncharacterized protein 99.3 1.6E-11 5.3E-16 98.2 9.4 118 95-249 19-147 (244)
163 3duw_A OMT, O-methyltransferas 99.3 3.2E-12 1.1E-16 101.5 5.4 99 95-199 56-171 (223)
164 3ckk_A TRNA (guanine-N(7)-)-me 99.3 8.3E-12 2.8E-16 100.1 7.7 98 96-195 45-168 (235)
165 1vbf_A 231AA long hypothetical 99.3 9.9E-12 3.4E-16 99.1 7.6 100 85-196 59-166 (231)
166 2qm3_A Predicted methyltransfe 99.2 4.8E-11 1.6E-15 102.1 11.8 96 97-197 172-279 (373)
167 1dl5_A Protein-L-isoaspartate 99.2 1.1E-11 3.9E-16 103.7 7.6 103 85-197 64-177 (317)
168 3sso_A Methyltransferase; macr 99.2 8.9E-12 3E-16 105.9 6.9 103 86-197 207-326 (419)
169 1ixk_A Methyltransferase; open 99.2 1.8E-11 6.1E-16 102.4 8.6 125 72-198 94-249 (315)
170 2ozv_A Hypothetical protein AT 99.2 9.7E-12 3.3E-16 101.2 6.7 100 95-195 34-170 (260)
171 2gpy_A O-methyltransferase; st 99.2 4.1E-12 1.4E-16 101.6 4.4 99 95-199 52-164 (233)
172 3tr6_A O-methyltransferase; ce 99.2 2.5E-12 8.4E-17 102.2 2.9 98 96-199 63-178 (225)
173 2esr_A Methyltransferase; stru 99.2 8.5E-12 2.9E-16 95.3 5.8 110 85-199 19-142 (177)
174 2fyt_A Protein arginine N-meth 99.2 2E-11 6.9E-16 103.1 7.9 102 86-192 54-168 (340)
175 3dmg_A Probable ribosomal RNA 99.2 1.7E-11 5.8E-16 104.9 7.4 96 97-195 233-340 (381)
176 1nv8_A HEMK protein; class I a 99.2 2.2E-11 7.4E-16 100.4 7.7 94 97-193 123-247 (284)
177 3q7e_A Protein arginine N-meth 99.2 1E-11 3.6E-16 105.3 5.9 97 95-193 64-171 (349)
178 2vdv_E TRNA (guanine-N(7)-)-me 99.2 9.3E-12 3.2E-16 100.4 5.2 98 95-194 47-172 (246)
179 1p91_A Ribosomal RNA large sub 99.2 1.7E-11 6E-16 99.9 6.8 93 96-198 84-181 (269)
180 3r3h_A O-methyltransferase, SA 99.2 3.6E-12 1.2E-16 102.6 2.7 98 97-200 60-175 (242)
181 3r0q_C Probable protein argini 99.2 1.2E-11 3.9E-16 106.0 5.7 108 87-197 54-171 (376)
182 3adn_A Spermidine synthase; am 99.2 1.7E-11 5.7E-16 101.4 6.4 99 96-195 82-198 (294)
183 3gjy_A Spermidine synthase; AP 99.2 9.4E-12 3.2E-16 103.3 4.9 98 98-196 90-201 (317)
184 2fhp_A Methylase, putative; al 99.2 1.4E-11 4.9E-16 94.7 5.6 100 95-199 42-158 (187)
185 3dr5_A Putative O-methyltransf 99.2 1.1E-11 3.9E-16 98.4 4.8 97 97-199 56-167 (221)
186 2hnk_A SAM-dependent O-methylt 99.2 1.1E-11 3.9E-16 99.4 4.2 99 95-199 58-185 (239)
187 2nyu_A Putative ribosomal RNA 99.2 7.9E-11 2.7E-15 91.3 8.7 104 88-196 13-146 (196)
188 3dou_A Ribosomal RNA large sub 99.2 3.5E-11 1.2E-15 93.3 6.6 104 86-196 14-140 (191)
189 1sui_A Caffeoyl-COA O-methyltr 99.2 1.6E-11 5.5E-16 99.1 4.7 98 96-199 78-194 (247)
190 3bzb_A Uncharacterized protein 99.2 1.5E-10 5.2E-15 95.2 10.4 96 95-194 77-204 (281)
191 3c3p_A Methyltransferase; NP_9 99.2 8.6E-12 2.9E-16 98.1 2.6 97 97-199 56-164 (210)
192 3lcv_B Sisomicin-gentamicin re 99.2 1.3E-11 4.6E-16 98.5 3.7 131 96-248 131-269 (281)
193 1r18_A Protein-L-isoaspartate( 99.2 3.7E-11 1.3E-15 95.6 6.2 101 87-196 73-195 (227)
194 2p41_A Type II methyltransfera 99.2 1.6E-10 5.6E-15 95.9 10.2 97 94-194 79-190 (305)
195 3tma_A Methyltransferase; thum 99.1 1.5E-10 5.3E-15 98.2 9.9 111 84-196 191-318 (354)
196 2oxt_A Nucleoside-2'-O-methylt 99.1 1.7E-10 5.9E-15 93.9 9.4 105 87-197 65-187 (265)
197 1g6q_1 HnRNP arginine N-methyl 99.1 3.5E-11 1.2E-15 101.2 5.4 97 95-193 36-143 (328)
198 2ift_A Putative methylase HI07 99.1 1.5E-11 5.3E-16 96.1 2.9 97 97-198 53-166 (201)
199 2wa2_A Non-structural protein 99.1 1.5E-10 5E-15 94.8 8.8 105 87-197 73-195 (276)
200 2yvl_A TRMI protein, hypotheti 99.1 1.7E-10 5.7E-15 92.8 8.8 101 85-196 80-191 (248)
201 1ws6_A Methyltransferase; stru 99.1 2.8E-11 9.6E-16 91.6 3.4 95 97-198 41-150 (171)
202 1i1n_A Protein-L-isoaspartate 99.1 1.3E-10 4.6E-15 92.2 7.3 93 95-196 75-183 (226)
203 3cbg_A O-methyltransferase; cy 99.1 2.7E-11 9.4E-16 96.8 2.9 97 97-199 72-186 (232)
204 3c3y_A Pfomt, O-methyltransfer 99.1 3.8E-11 1.3E-15 96.3 3.8 97 96-198 69-184 (237)
205 2avd_A Catechol-O-methyltransf 99.1 3E-11 1E-15 96.1 3.1 98 95-198 67-182 (229)
206 2pbf_A Protein-L-isoaspartate 99.1 1.3E-10 4.4E-15 92.3 6.7 93 95-196 78-194 (227)
207 1i9g_A Hypothetical protein RV 99.1 1.4E-10 4.8E-15 95.1 7.1 103 85-196 88-204 (280)
208 1mjf_A Spermidine synthase; sp 99.1 6.5E-11 2.2E-15 97.4 4.8 97 97-195 75-193 (281)
209 2i7c_A Spermidine synthase; tr 99.1 4.9E-11 1.7E-15 98.2 3.9 99 96-195 77-192 (283)
210 2b25_A Hypothetical protein; s 99.1 1.9E-10 6.7E-15 96.9 7.5 104 85-197 94-221 (336)
211 3gdh_A Trimethylguanosine synt 99.1 2.9E-12 9.9E-17 102.9 -4.2 92 97-193 78-179 (241)
212 1zq9_A Probable dimethyladenos 99.1 1.2E-10 4E-15 96.0 5.3 104 84-192 16-144 (285)
213 4hc4_A Protein arginine N-meth 99.1 2.4E-10 8.1E-15 97.3 7.2 95 97-193 83-187 (376)
214 1uir_A Polyamine aminopropyltr 99.1 9.8E-11 3.4E-15 97.8 4.7 98 97-195 77-195 (314)
215 1iy9_A Spermidine synthase; ro 99.0 7.9E-11 2.7E-15 96.5 3.7 98 97-195 75-189 (275)
216 1xj5_A Spermidine synthase 1; 99.0 7.7E-11 2.6E-15 99.1 3.7 98 96-194 119-234 (334)
217 3ajd_A Putative methyltransfer 99.0 1.6E-10 5.4E-15 94.7 5.3 109 89-199 76-215 (274)
218 2pt6_A Spermidine synthase; tr 99.0 1.1E-10 3.7E-15 97.7 4.4 97 97-195 116-230 (321)
219 2b2c_A Spermidine synthase; be 99.0 9.4E-11 3.2E-15 97.8 4.0 97 97-195 108-222 (314)
220 2o07_A Spermidine synthase; st 99.0 9.3E-11 3.2E-15 97.4 3.9 99 96-195 94-209 (304)
221 2yxl_A PH0851 protein, 450AA l 99.0 7.7E-10 2.6E-14 96.9 9.9 111 87-199 250-393 (450)
222 3a27_A TYW2, uncharacterized p 99.0 1E-10 3.5E-15 95.8 4.0 97 95-198 117-222 (272)
223 2fpo_A Methylase YHHF; structu 99.0 1.3E-10 4.6E-15 90.8 3.9 97 97-198 54-163 (202)
224 1ne2_A Hypothetical protein TA 99.0 5.1E-10 1.8E-14 87.1 6.9 88 95-185 49-139 (200)
225 2cmg_A Spermidine synthase; tr 99.0 4.3E-10 1.5E-14 91.4 6.6 88 97-194 72-170 (262)
226 3m6w_A RRNA methylase; rRNA me 99.0 3.5E-10 1.2E-14 98.7 5.6 125 72-199 77-233 (464)
227 3frh_A 16S rRNA methylase; met 99.0 3.9E-10 1.3E-14 89.3 5.3 95 96-195 104-206 (253)
228 1inl_A Spermidine synthase; be 99.0 1.9E-10 6.5E-15 95.2 3.5 97 97-194 90-204 (296)
229 2xyq_A Putative 2'-O-methyl tr 99.0 2.2E-09 7.6E-14 88.2 8.8 93 94-196 60-172 (290)
230 2igt_A SAM dependent methyltra 98.9 2.4E-09 8.3E-14 90.0 8.8 96 97-196 153-273 (332)
231 1wy7_A Hypothetical protein PH 98.9 5.1E-09 1.7E-13 81.8 10.0 89 95-185 47-141 (207)
232 3tm4_A TRNA (guanine N2-)-meth 98.9 3.4E-09 1.2E-13 90.5 9.5 104 85-193 207-327 (373)
233 2ih2_A Modification methylase 98.9 3.4E-09 1.2E-13 91.8 9.3 108 84-196 27-165 (421)
234 2h1r_A Dimethyladenosine trans 98.9 1.2E-09 4.1E-14 90.6 5.9 101 84-189 30-153 (299)
235 3m4x_A NOL1/NOP2/SUN family pr 98.9 5.4E-10 1.9E-14 97.4 3.8 126 72-199 81-238 (456)
236 2frx_A Hypothetical protein YE 98.9 3.5E-09 1.2E-13 93.1 8.9 108 90-199 109-250 (479)
237 1qam_A ERMC' methyltransferase 98.9 2.3E-09 8E-14 86.2 7.1 105 84-192 18-143 (244)
238 4azs_A Methyltransferase WBDD; 98.9 2.8E-10 9.6E-15 102.5 1.8 101 97-200 66-178 (569)
239 1yub_A Ermam, rRNA methyltrans 98.9 6.2E-10 2.1E-14 89.6 2.9 109 84-196 17-146 (245)
240 2f8l_A Hypothetical protein LM 98.9 1.8E-09 6.3E-14 91.2 5.9 100 96-196 129-257 (344)
241 3k6r_A Putative transferase PH 98.9 3.7E-09 1.3E-13 86.4 7.0 120 95-246 123-252 (278)
242 1sqg_A SUN protein, FMU protei 98.8 3.5E-09 1.2E-13 92.2 6.1 110 88-199 238-378 (429)
243 3b5i_A S-adenosyl-L-methionine 98.7 9.8E-08 3.4E-12 81.0 12.0 152 98-250 53-297 (374)
244 3k0b_A Predicted N6-adenine-sp 98.7 3.5E-08 1.2E-12 84.7 8.5 111 84-196 189-351 (393)
245 2as0_A Hypothetical protein PH 98.7 6.7E-09 2.3E-13 89.5 3.6 99 97-197 217-337 (396)
246 1wxx_A TT1595, hypothetical pr 98.7 6.4E-09 2.2E-13 89.1 3.2 97 97-196 209-326 (382)
247 3ldg_A Putative uncharacterize 98.7 1.2E-07 4E-12 81.1 10.9 112 83-196 181-344 (384)
248 2b78_A Hypothetical protein SM 98.7 5.6E-09 1.9E-13 89.5 2.6 99 96-196 211-332 (385)
249 2yx1_A Hypothetical protein MJ 98.7 1.5E-08 5E-13 85.4 4.7 93 96-198 194-294 (336)
250 3ldu_A Putative methylase; str 98.6 5.5E-08 1.9E-12 83.3 7.7 111 84-196 183-345 (385)
251 4dmg_A Putative uncharacterize 98.6 4.4E-08 1.5E-12 84.0 6.6 99 96-197 213-328 (393)
252 2okc_A Type I restriction enzy 98.6 2.6E-08 9E-13 87.0 4.6 111 84-196 159-308 (445)
253 2qfm_A Spermine synthase; sper 98.5 4.7E-08 1.6E-12 82.2 4.3 97 97-195 188-314 (364)
254 3c0k_A UPF0064 protein YCCW; P 98.5 3.3E-08 1.1E-12 85.1 3.5 98 96-196 219-340 (396)
255 3gru_A Dimethyladenosine trans 98.5 2.1E-07 7.2E-12 76.7 7.8 80 84-167 38-125 (295)
256 2efj_A 3,7-dimethylxanthine me 98.5 3.1E-07 1.1E-11 78.0 9.1 151 98-249 53-290 (384)
257 3v97_A Ribosomal RNA large sub 98.5 8.2E-08 2.8E-12 88.3 5.2 98 97-196 539-658 (703)
258 1m6e_X S-adenosyl-L-methionnin 98.5 6.6E-07 2.3E-11 75.4 10.2 153 96-249 50-278 (359)
259 3ftd_A Dimethyladenosine trans 98.5 4.1E-07 1.4E-11 73.2 8.3 84 84-170 19-108 (249)
260 1uwv_A 23S rRNA (uracil-5-)-me 98.5 1.9E-07 6.4E-12 81.3 6.8 99 85-193 275-387 (433)
261 3fut_A Dimethyladenosine trans 98.5 3.5E-07 1.2E-11 74.4 7.8 91 84-180 35-133 (271)
262 2jjq_A Uncharacterized RNA met 98.5 5.5E-07 1.9E-11 78.1 9.3 90 96-194 289-386 (425)
263 3o4f_A Spermidine synthase; am 98.5 1.6E-07 5.4E-12 76.9 5.4 98 96-195 82-198 (294)
264 4gqb_A Protein arginine N-meth 98.4 1.6E-07 5.5E-12 84.6 5.4 125 60-192 324-464 (637)
265 1qyr_A KSGA, high level kasuga 98.4 3.2E-07 1.1E-11 74.0 6.0 91 84-178 9-111 (252)
266 3evf_A RNA-directed RNA polyme 98.4 1.4E-06 4.8E-11 70.0 8.9 106 86-193 64-182 (277)
267 3uzu_A Ribosomal RNA small sub 98.4 1.9E-07 6.4E-12 76.4 3.6 67 85-153 31-102 (279)
268 1rjd_A PPM1P, carboxy methyl t 98.3 2.1E-06 7.2E-11 71.9 9.6 146 96-244 96-281 (334)
269 3tqs_A Ribosomal RNA small sub 98.3 6.7E-07 2.3E-11 72.2 4.9 66 84-153 17-87 (255)
270 1m6y_A S-adenosyl-methyltransf 98.3 8.9E-07 3E-11 73.1 5.2 79 84-164 14-106 (301)
271 3v97_A Ribosomal RNA large sub 98.2 2.9E-06 9.8E-11 78.1 8.9 111 84-196 178-348 (703)
272 2b9e_A NOL1/NOP2/SUN domain fa 98.2 3.5E-06 1.2E-10 69.9 8.0 109 88-199 94-238 (309)
273 3ua3_A Protein arginine N-meth 98.2 1.9E-06 6.5E-11 77.9 6.4 125 60-192 379-531 (745)
274 2r6z_A UPF0341 protein in RSP 98.2 2.8E-06 9.7E-11 68.6 6.7 99 95-198 81-219 (258)
275 3gcz_A Polyprotein; flavivirus 98.1 3.3E-06 1.1E-10 68.0 5.4 108 85-194 79-200 (282)
276 3bt7_A TRNA (uracil-5-)-methyl 98.1 2.4E-06 8.4E-11 72.7 4.9 98 86-196 204-327 (369)
277 2dul_A N(2),N(2)-dimethylguano 98.1 2.1E-06 7.3E-11 73.2 3.7 92 97-195 47-164 (378)
278 2ar0_A M.ecoki, type I restric 98.0 3.8E-06 1.3E-10 75.0 5.2 110 84-195 157-312 (541)
279 4auk_A Ribosomal RNA large sub 98.0 3.2E-05 1.1E-09 65.1 9.7 96 95-196 209-307 (375)
280 3axs_A Probable N(2),N(2)-dime 98.0 1.1E-06 3.7E-11 75.2 -0.0 93 96-195 51-158 (392)
281 3iei_A Leucine carboxyl methyl 97.9 0.00024 8.2E-09 59.3 13.1 148 97-251 90-281 (334)
282 3eld_A Methyltransferase; flav 97.9 5.9E-05 2E-09 61.2 8.8 106 87-194 72-190 (300)
283 3c6k_A Spermine synthase; sper 97.8 1E-05 3.5E-10 68.3 3.9 96 97-194 205-330 (381)
284 3s1s_A Restriction endonucleas 97.8 0.00011 3.8E-09 67.6 10.2 101 95-196 319-466 (878)
285 3p8z_A Mtase, non-structural p 97.7 0.00011 3.8E-09 57.5 7.8 111 85-199 67-189 (267)
286 3khk_A Type I restriction-modi 97.7 1.4E-05 4.8E-10 71.3 2.7 109 84-195 233-395 (544)
287 2px2_A Genome polyprotein [con 97.7 0.0001 3.4E-09 58.6 7.2 106 85-193 62-181 (269)
288 2qy6_A UPF0209 protein YFCK; s 97.7 1.7E-05 5.8E-10 63.9 2.9 93 96-193 59-211 (257)
289 2k4m_A TR8_protein, UPF0146 pr 97.7 5.8E-05 2E-09 54.7 5.3 83 96-196 34-122 (153)
290 3cvo_A Methyltransferase-like 97.6 0.00022 7.4E-09 55.1 7.4 88 97-196 30-154 (202)
291 2oyr_A UPF0341 protein YHIQ; a 97.6 2E-05 7E-10 63.5 1.7 80 85-168 75-176 (258)
292 3ll7_A Putative methyltransfer 97.6 5.8E-05 2E-09 64.7 4.4 64 96-162 92-169 (410)
293 3lkz_A Non-structural protein 97.5 0.00044 1.5E-08 55.9 8.1 107 85-193 83-202 (321)
294 3lkd_A Type I restriction-modi 97.4 0.00023 7.9E-09 63.4 7.0 98 97-195 221-358 (542)
295 2wk1_A NOVP; transferase, O-me 97.4 0.00036 1.2E-08 56.8 7.5 94 97-195 106-244 (282)
296 4fzv_A Putative methyltransfer 97.4 0.00023 7.9E-09 60.0 6.2 113 89-203 141-292 (359)
297 1wg8_A Predicted S-adenosylmet 97.3 0.00032 1.1E-08 56.8 5.4 65 84-152 10-77 (285)
298 2vz8_A Fatty acid synthase; tr 97.3 0.00011 3.7E-09 76.2 3.2 141 96-248 1239-1392(2512)
299 2uyo_A Hypothetical protein ML 97.2 0.00064 2.2E-08 56.2 6.9 95 98-195 103-218 (310)
300 2zwa_A Leucine carboxyl methyl 97.1 0.0029 1E-07 58.1 10.7 150 97-251 107-309 (695)
301 3tka_A Ribosomal RNA small sub 96.9 0.0022 7.4E-08 53.2 6.6 67 83-151 44-114 (347)
302 1i4w_A Mitochondrial replicati 96.6 0.0023 7.9E-08 53.7 5.3 67 84-152 40-116 (353)
303 3r24_A NSP16, 2'-O-methyl tran 96.5 0.0028 9.7E-08 51.3 5.0 92 95-194 107-216 (344)
304 3ufb_A Type I restriction-modi 95.8 0.041 1.4E-06 48.9 9.3 110 84-195 205-362 (530)
305 2zig_A TTHA0409, putative modi 95.7 0.0092 3.2E-07 48.9 4.4 51 84-139 224-275 (297)
306 3vyw_A MNMC2; tRNA wobble urid 95.1 0.033 1.1E-06 45.6 5.7 92 97-193 96-224 (308)
307 3iht_A S-adenosyl-L-methionine 93.0 0.089 3.1E-06 38.3 3.6 96 98-197 41-149 (174)
308 3tos_A CALS11; methyltransfera 92.9 0.079 2.7E-06 42.3 3.7 94 98-196 70-218 (257)
309 3ggo_A Prephenate dehydrogenas 92.1 0.61 2.1E-05 38.3 8.1 89 98-192 33-125 (314)
310 1g60_A Adenine-specific methyl 91.4 0.27 9.1E-06 39.2 5.1 50 84-138 201-251 (260)
311 1zkd_A DUF185; NESG, RPR58, st 91.0 0.4 1.4E-05 40.6 6.0 61 66-132 54-121 (387)
312 2py6_A Methyltransferase FKBM; 89.3 0.54 1.8E-05 40.2 5.5 43 95-138 224-269 (409)
313 1pl8_A Human sorbitol dehydrog 89.2 2.2 7.5E-05 35.4 9.2 94 94-196 168-274 (356)
314 2oo3_A Protein involved in cat 88.7 0.66 2.3E-05 37.4 5.3 97 98-199 92-202 (283)
315 1f8f_A Benzyl alcohol dehydrog 88.6 1.1 3.8E-05 37.4 7.0 95 94-197 187-291 (371)
316 3b1f_A Putative prephenate deh 88.4 2.5 8.7E-05 33.8 8.8 88 99-192 7-98 (290)
317 3g7u_A Cytosine-specific methy 88.1 2.2 7.4E-05 36.0 8.4 95 99-198 3-121 (376)
318 1pqw_A Polyketide synthase; ro 87.2 1.1 3.9E-05 33.6 5.7 91 94-197 35-139 (198)
319 2dph_A Formaldehyde dismutase; 86.6 1.7 5.7E-05 36.8 7.0 105 90-197 179-301 (398)
320 3s2e_A Zinc-containing alcohol 86.4 1.2 3.9E-05 36.8 5.7 93 94-196 163-264 (340)
321 4ej6_A Putative zinc-binding d 86.1 1.9 6.4E-05 36.1 7.0 96 94-198 179-287 (370)
322 3mag_A VP39; methylated adenin 86.0 4.6 0.00016 32.6 8.6 79 97-200 60-143 (307)
323 3two_A Mannitol dehydrogenase; 85.8 1.2 4.2E-05 36.8 5.6 91 94-196 173-266 (348)
324 2g5c_A Prephenate dehydrogenas 85.6 3.8 0.00013 32.6 8.3 88 100-193 3-94 (281)
325 4dvj_A Putative zinc-dependent 85.2 2.9 9.8E-05 34.8 7.7 90 97-195 171-270 (363)
326 3c85_A Putative glutathione-re 85.1 7.1 0.00024 28.6 9.2 90 98-194 39-138 (183)
327 1e3j_A NADP(H)-dependent ketos 85.0 7 0.00024 32.2 9.9 93 94-196 165-272 (352)
328 3uko_A Alcohol dehydrogenase c 84.7 3.8 0.00013 34.2 8.3 99 89-197 186-297 (378)
329 1g55_A DNA cytosine methyltran 83.9 1.6 5.6E-05 36.2 5.5 72 98-169 2-81 (343)
330 2g1u_A Hypothetical protein TM 83.7 9.7 0.00033 27.1 12.0 91 96-193 17-116 (155)
331 3jv7_A ADH-A; dehydrogenase, n 83.4 1.4 4.7E-05 36.4 4.9 94 95-197 169-272 (345)
332 3l9w_A Glutathione-regulated p 83.0 4.8 0.00017 34.3 8.2 89 98-194 4-101 (413)
333 1kol_A Formaldehyde dehydrogen 82.7 4.8 0.00016 33.9 8.0 99 94-197 182-302 (398)
334 3fwz_A Inner membrane protein 81.9 9.5 0.00033 26.6 8.3 88 98-193 7-103 (140)
335 3l4b_C TRKA K+ channel protien 81.9 9.3 0.00032 29.0 8.8 86 100-193 2-97 (218)
336 3m6i_A L-arabinitol 4-dehydrog 81.6 6.6 0.00022 32.5 8.4 97 90-196 173-284 (363)
337 2dq4_A L-threonine 3-dehydroge 80.8 8.8 0.0003 31.5 8.9 90 94-196 162-263 (343)
338 3fpc_A NADP-dependent alcohol 80.5 1.3 4.5E-05 36.7 3.7 98 90-197 160-268 (352)
339 1uuf_A YAHK, zinc-type alcohol 80.4 1.5 5.2E-05 36.6 4.1 93 94-196 191-289 (369)
340 4a2c_A Galactitol-1-phosphate 79.9 14 0.00049 30.1 9.9 96 94-198 157-263 (346)
341 2zig_A TTHA0409, putative modi 79.5 1.2 4.2E-05 36.0 3.1 54 141-194 20-96 (297)
342 2jhf_A Alcohol dehydrogenase E 79.4 4.8 0.00017 33.5 6.9 94 94-196 188-294 (374)
343 1p0f_A NADP-dependent alcohol 79.0 4.4 0.00015 33.8 6.5 94 94-196 188-294 (373)
344 1cdo_A Alcohol dehydrogenase; 78.8 6.2 0.00021 32.8 7.4 94 94-196 189-295 (374)
345 3ius_A Uncharacterized conserv 78.8 22 0.00074 27.8 11.6 93 99-195 6-102 (286)
346 4eez_A Alcohol dehydrogenase 1 77.6 5.1 0.00017 32.9 6.4 94 94-196 160-264 (348)
347 1e3i_A Alcohol dehydrogenase, 77.3 4.9 0.00017 33.5 6.3 94 94-196 192-298 (376)
348 1vpt_A VP39; RNA CAP, poly(A) 77.1 7 0.00024 31.9 6.7 79 98-200 76-158 (348)
349 2c0c_A Zinc binding alcohol de 77.0 5.1 0.00017 33.3 6.3 93 94-197 160-263 (362)
350 3ew7_A LMO0794 protein; Q8Y8U8 76.9 13 0.00043 27.8 8.2 93 100-196 2-103 (221)
351 3d1l_A Putative NADP oxidoredu 76.9 11 0.00039 29.4 8.1 90 98-195 10-102 (266)
352 2aef_A Calcium-gated potassium 76.9 21 0.00072 27.2 9.5 88 97-193 8-103 (234)
353 3qwb_A Probable quinone oxidor 76.7 7.9 0.00027 31.6 7.3 93 94-197 145-249 (334)
354 1v3u_A Leukotriene B4 12- hydr 76.6 5.9 0.0002 32.3 6.5 90 94-196 142-245 (333)
355 4dcm_A Ribosomal RNA large sub 76.3 9.8 0.00034 31.8 7.9 91 97-196 38-137 (375)
356 2fzw_A Alcohol dehydrogenase c 76.3 4.5 0.00015 33.7 5.8 94 94-196 187-293 (373)
357 2j3h_A NADP-dependent oxidored 76.1 8.9 0.0003 31.4 7.5 90 94-196 152-256 (345)
358 3ip1_A Alcohol dehydrogenase, 76.0 8.5 0.00029 32.4 7.5 98 95-197 211-320 (404)
359 2i6t_A Ubiquitin-conjugating e 76.0 4 0.00014 33.2 5.2 95 97-195 13-125 (303)
360 3llv_A Exopolyphosphatase-rela 75.8 17 0.00058 25.1 9.2 86 98-193 6-101 (141)
361 2h6e_A ADH-4, D-arabinose 1-de 75.6 1.5 5.1E-05 36.2 2.6 92 95-196 169-270 (344)
362 4b7c_A Probable oxidoreductase 74.8 7.6 0.00026 31.7 6.7 96 90-197 143-250 (336)
363 1lss_A TRK system potassium up 74.7 17 0.0006 24.7 8.5 87 98-193 4-100 (140)
364 2f1k_A Prephenate dehydrogenas 74.6 14 0.00047 29.1 8.1 84 100-192 2-88 (279)
365 3goh_A Alcohol dehydrogenase, 73.8 1 3.4E-05 36.7 1.1 92 90-195 136-229 (315)
366 3uog_A Alcohol dehydrogenase; 73.8 4.9 0.00017 33.3 5.4 93 94-197 186-289 (363)
367 3ulk_A Ketol-acid reductoisome 73.7 2.6 8.7E-05 36.4 3.5 91 97-196 36-133 (491)
368 3g79_A NDP-N-acetyl-D-galactos 73.2 29 0.00098 30.2 10.2 99 97-199 17-150 (478)
369 3c24_A Putative oxidoreductase 72.7 9.8 0.00033 30.3 6.8 83 99-192 12-98 (286)
370 2d8a_A PH0655, probable L-thre 72.4 9.7 0.00033 31.2 6.9 93 94-196 165-268 (348)
371 1rjw_A ADH-HT, alcohol dehydro 72.1 7.2 0.00025 31.9 6.0 91 94-196 161-262 (339)
372 4ezb_A Uncharacterized conserv 71.9 28 0.00097 28.1 9.5 83 99-193 25-119 (317)
373 3dfz_A SIRC, precorrin-2 dehyd 71.1 8.1 0.00028 29.9 5.6 64 97-163 30-98 (223)
374 3h2s_A Putative NADH-flavin re 70.7 30 0.001 25.7 10.0 93 100-195 2-104 (224)
375 1boo_A Protein (N-4 cytosine-s 70.6 4 0.00014 33.4 4.0 51 84-139 241-292 (323)
376 2hcy_A Alcohol dehydrogenase 1 70.5 3.9 0.00013 33.7 4.0 91 94-196 166-270 (347)
377 2c7p_A Modification methylase 70.5 6 0.00021 32.5 5.1 64 98-165 11-80 (327)
378 4e2x_A TCAB9; kijanose, tetron 69.8 13 0.00043 31.4 7.1 91 96-194 317-409 (416)
379 3d4o_A Dipicolinate synthase s 69.7 14 0.00047 29.6 7.0 86 97-193 154-242 (293)
380 3zwc_A Peroxisomal bifunctiona 69.6 9.3 0.00032 35.2 6.6 151 98-254 316-498 (742)
381 2rir_A Dipicolinate synthase, 69.5 9.9 0.00034 30.6 6.1 86 97-193 156-244 (300)
382 1boo_A Protein (N-4 cytosine-s 68.5 3.2 0.00011 34.0 3.0 54 141-194 13-83 (323)
383 4f3n_A Uncharacterized ACR, CO 68.4 9.3 0.00032 32.7 5.8 57 65-130 113-174 (432)
384 4eye_A Probable oxidoreductase 67.2 3.7 0.00013 33.8 3.1 95 90-196 153-258 (342)
385 1vj0_A Alcohol dehydrogenase, 66.9 5.2 0.00018 33.5 4.0 94 95-197 193-300 (380)
386 1piw_A Hypothetical zinc-type 65.2 1.9 6.5E-05 35.8 1.0 95 94-196 176-277 (360)
387 1yb5_A Quinone oxidoreductase; 65.2 8.2 0.00028 31.8 4.9 92 94-196 167-270 (351)
388 3tqh_A Quinone oxidoreductase; 64.8 1.8 6.1E-05 35.3 0.7 94 90-195 146-245 (321)
389 3pvc_A TRNA 5-methylaminomethy 64.8 1.6 5.4E-05 39.9 0.5 88 100-192 61-208 (689)
390 3jyn_A Quinone oxidoreductase; 64.8 9.1 0.00031 31.1 5.1 93 94-197 137-241 (325)
391 3gms_A Putative NADPH:quinone 64.7 6.4 0.00022 32.2 4.2 97 89-197 137-245 (340)
392 1iz0_A Quinone oxidoreductase; 64.5 2.1 7.3E-05 34.5 1.2 90 95-196 123-219 (302)
393 3ado_A Lambda-crystallin; L-gu 64.4 9.4 0.00032 31.3 5.0 98 97-199 5-127 (319)
394 2o3j_A UDP-glucose 6-dehydroge 63.3 21 0.00072 30.9 7.3 94 99-195 10-134 (481)
395 3e48_A Putative nucleoside-dip 63.0 43 0.0015 26.1 8.7 94 100-197 2-107 (289)
396 2ew2_A 2-dehydropantoate 2-red 62.9 32 0.0011 27.3 8.1 87 99-194 4-107 (316)
397 1t2d_A LDH-P, L-lactate dehydr 62.1 21 0.00071 29.1 6.7 94 98-194 4-125 (322)
398 3tka_A Ribosomal RNA small sub 61.9 3.3 0.00011 34.3 1.8 27 172-198 251-277 (347)
399 1wg8_A Predicted S-adenosylmet 61.8 3.4 0.00012 33.3 1.8 27 172-198 210-236 (285)
400 1qor_A Quinone oxidoreductase; 61.7 6.8 0.00023 31.8 3.7 91 94-197 137-241 (327)
401 4e12_A Diketoreductase; oxidor 61.3 11 0.00037 30.1 4.8 88 99-193 5-119 (283)
402 3dmg_A Probable ribosomal RNA 61.1 11 0.00036 31.7 4.9 102 85-195 35-139 (381)
403 3ps9_A TRNA 5-methylaminomethy 60.6 4.5 0.00015 36.8 2.7 92 100-192 69-216 (676)
404 1id1_A Putative potassium chan 60.6 40 0.0014 23.6 9.4 88 98-193 3-103 (153)
405 2b5w_A Glucose dehydrogenase; 60.3 11 0.00036 31.2 4.7 87 99-197 174-275 (357)
406 2km1_A Protein DRE2; yeast, an 60.1 4.7 0.00016 28.5 2.1 19 175-193 78-96 (136)
407 1x13_A NAD(P) transhydrogenase 60.0 8.8 0.0003 32.5 4.2 39 97-137 171-211 (401)
408 4dup_A Quinone oxidoreductase; 59.1 11 0.00038 31.0 4.6 93 94-197 164-267 (353)
409 3ce6_A Adenosylhomocysteinase; 57.6 10 0.00035 33.2 4.2 88 95-195 271-361 (494)
410 3mog_A Probable 3-hydroxybutyr 57.4 30 0.001 30.1 7.2 146 99-254 6-189 (483)
411 1eg2_A Modification methylase 56.5 16 0.00056 29.7 5.2 50 84-138 231-284 (319)
412 3krt_A Crotonyl COA reductase; 56.3 20 0.0007 30.6 6.0 92 94-196 225-345 (456)
413 2hwk_A Helicase NSP2; rossman 56.3 4.5 0.00015 32.6 1.6 55 142-196 189-255 (320)
414 3g0o_A 3-hydroxyisobutyrate de 56.2 29 0.001 27.7 6.6 88 98-193 7-100 (303)
415 1zcj_A Peroxisomal bifunctiona 56.0 82 0.0028 27.0 9.8 88 98-193 37-148 (463)
416 3gg2_A Sugar dehydrogenase, UD 55.7 21 0.00071 30.7 5.9 95 99-198 3-124 (450)
417 4hv4_A UDP-N-acetylmuramate--L 55.4 59 0.002 28.2 8.8 125 98-244 22-150 (494)
418 3qv2_A 5-cytosine DNA methyltr 55.0 11 0.00039 30.9 3.9 123 98-247 10-156 (327)
419 3nx4_A Putative oxidoreductase 54.5 7.9 0.00027 31.3 3.0 87 100-197 149-243 (324)
420 3pid_A UDP-glucose 6-dehydroge 54.5 29 0.00099 29.7 6.5 92 98-193 36-151 (432)
421 1np3_A Ketol-acid reductoisome 54.2 13 0.00044 30.6 4.2 84 98-192 16-104 (338)
422 2zb4_A Prostaglandin reductase 53.6 26 0.00089 28.7 6.1 90 94-196 155-261 (357)
423 3me5_A Cytosine-specific methy 53.1 20 0.00069 31.1 5.4 53 98-152 88-145 (482)
424 3p2y_A Alanine dehydrogenase/p 52.8 3.3 0.00011 34.9 0.3 40 97-138 183-224 (381)
425 3tri_A Pyrroline-5-carboxylate 52.4 24 0.00083 28.0 5.5 87 99-192 4-95 (280)
426 2y0c_A BCEC, UDP-glucose dehyd 51.9 23 0.0008 30.7 5.6 99 95-198 5-130 (478)
427 4a0s_A Octenoyl-COA reductase/ 51.7 26 0.0009 29.8 5.9 92 94-196 217-337 (447)
428 1l7d_A Nicotinamide nucleotide 51.5 3.7 0.00013 34.5 0.5 36 97-134 171-208 (384)
429 3hn7_A UDP-N-acetylmuramate-L- 51.3 96 0.0033 27.1 9.6 127 98-245 19-151 (524)
430 1xa0_A Putative NADPH dependen 50.9 22 0.00076 28.7 5.1 91 95-196 146-247 (328)
431 3vrd_B FCCB subunit, flavocyto 50.7 13 0.00045 30.9 3.8 32 98-130 2-35 (401)
432 3k96_A Glycerol-3-phosphate de 50.4 37 0.0012 28.1 6.4 88 98-194 29-132 (356)
433 1y6j_A L-lactate dehydrogenase 50.2 93 0.0032 25.1 8.8 94 98-194 7-122 (318)
434 1bg6_A N-(1-D-carboxylethyl)-L 49.8 25 0.00086 28.6 5.3 88 99-194 5-108 (359)
435 2v6b_A L-LDH, L-lactate dehydr 49.6 57 0.002 26.1 7.4 92 100-194 2-115 (304)
436 3fbg_A Putative arginate lyase 49.4 42 0.0014 27.3 6.6 88 97-194 150-247 (346)
437 2cz4_A Hypothetical protein TT 49.1 23 0.0008 24.3 4.2 27 170-196 82-110 (119)
438 3ic5_A Putative saccharopine d 48.5 53 0.0018 21.3 6.1 63 98-164 5-77 (118)
439 1tt7_A YHFP; alcohol dehydroge 48.1 20 0.00069 29.0 4.5 91 95-196 147-248 (330)
440 1yqd_A Sinapyl alcohol dehydro 47.9 31 0.0011 28.5 5.6 92 95-196 184-283 (366)
441 2vn8_A Reticulon-4-interacting 47.5 42 0.0014 27.7 6.4 92 95-195 181-280 (375)
442 3ubt_Y Modification methylase 47.2 22 0.00076 28.8 4.6 95 99-198 1-112 (331)
443 3c7a_A Octopine dehydrogenase; 47.2 36 0.0012 28.4 6.0 33 156-193 82-114 (404)
444 3oig_A Enoyl-[acyl-carrier-pro 45.9 99 0.0034 23.7 9.4 97 98-197 7-149 (266)
445 2cf5_A Atccad5, CAD, cinnamyl 45.9 23 0.00079 29.1 4.5 92 95-196 177-276 (357)
446 1m6y_A S-adenosyl-methyltransf 45.8 6.3 0.00022 32.0 1.0 26 172-197 222-247 (301)
447 2cvz_A Dehydrogenase, 3-hydrox 45.4 37 0.0013 26.6 5.5 83 100-193 3-88 (289)
448 4a7p_A UDP-glucose dehydrogena 45.4 82 0.0028 27.0 8.0 94 97-194 7-128 (446)
449 1ez4_A Lactate dehydrogenase; 45.4 86 0.003 25.3 7.8 96 97-194 4-120 (318)
450 2cdc_A Glucose dehydrogenase g 45.2 5.9 0.0002 32.9 0.7 88 98-196 181-279 (366)
451 4dio_A NAD(P) transhydrogenase 45.1 2.9 9.8E-05 35.6 -1.2 40 97-138 189-230 (405)
452 2hjr_A Malate dehydrogenase; m 44.7 47 0.0016 27.0 6.2 92 99-194 15-130 (328)
453 3gqv_A Enoyl reductase; medium 44.6 72 0.0025 26.2 7.4 91 96-196 163-264 (371)
454 3ghy_A Ketopantoate reductase 44.4 29 0.00099 28.2 4.9 91 98-197 3-106 (335)
455 3r6d_A NAD-dependent epimerase 44.3 94 0.0032 23.0 10.2 135 100-250 7-154 (221)
456 1mv8_A GMD, GDP-mannose 6-dehy 44.3 32 0.0011 29.3 5.3 92 100-195 2-122 (436)
457 3n58_A Adenosylhomocysteinase; 44.2 44 0.0015 28.8 5.9 96 86-194 235-333 (464)
458 2vhw_A Alanine dehydrogenase; 43.8 1.6 5.5E-05 36.7 -3.0 95 97-195 167-268 (377)
459 4e21_A 6-phosphogluconate dehy 43.8 63 0.0021 26.7 6.8 85 98-192 22-112 (358)
460 3d0o_A L-LDH 1, L-lactate dehy 42.9 1.1E+02 0.0036 24.7 8.0 94 98-194 6-122 (317)
461 3k6j_A Protein F01G10.3, confi 42.7 1.6E+02 0.0056 25.3 9.5 90 98-195 54-166 (460)
462 1lnq_A MTHK channels, potassiu 42.6 66 0.0023 26.0 6.8 86 98-193 115-209 (336)
463 3grk_A Enoyl-(acyl-carrier-pro 42.6 1.2E+02 0.0042 23.8 9.3 97 98-197 31-171 (293)
464 3ldh_A Lactate dehydrogenase; 42.5 91 0.0031 25.5 7.5 95 97-195 20-138 (330)
465 2h78_A Hibadh, 3-hydroxyisobut 41.7 66 0.0022 25.5 6.6 85 99-192 4-94 (302)
466 2q3e_A UDP-glucose 6-dehydroge 41.6 64 0.0022 27.7 6.8 94 99-195 6-130 (467)
467 1a5z_A L-lactate dehydrogenase 41.4 1.2E+02 0.0039 24.5 8.0 92 100-194 2-115 (319)
468 1v8b_A Adenosylhomocysteinase; 41.2 46 0.0016 28.9 5.7 83 97-192 256-341 (479)
469 2zqz_A L-LDH, L-lactate dehydr 40.0 84 0.0029 25.5 7.0 97 96-194 7-124 (326)
470 1zsy_A Mitochondrial 2-enoyl t 39.7 75 0.0026 25.9 6.8 92 94-195 164-270 (357)
471 3hwr_A 2-dehydropantoate 2-red 39.2 45 0.0016 26.8 5.2 90 97-195 18-120 (318)
472 2dpo_A L-gulonate 3-dehydrogen 38.6 61 0.0021 26.3 5.9 89 98-193 6-121 (319)
473 3slk_A Polyketide synthase ext 38.6 65 0.0022 29.9 6.7 90 94-195 342-442 (795)
474 1smk_A Malate dehydrogenase, g 38.2 1.1E+02 0.0038 24.7 7.4 96 97-194 7-124 (326)
475 3dfu_A Uncharacterized protein 37.8 64 0.0022 24.9 5.6 66 97-192 5-72 (232)
476 2x0j_A Malate dehydrogenase; o 37.8 68 0.0023 25.8 5.9 96 100-195 2-118 (294)
477 3qha_A Putative oxidoreductase 37.8 69 0.0024 25.4 6.1 86 98-193 15-103 (296)
478 1pjq_A CYSG, siroheme synthase 37.6 59 0.002 27.9 5.9 79 98-183 12-95 (457)
479 3gt0_A Pyrroline-5-carboxylate 37.6 7.3 0.00025 30.3 0.1 87 99-192 3-94 (247)
480 1obb_A Maltase, alpha-glucosid 37.4 70 0.0024 27.7 6.3 65 99-164 4-85 (480)
481 4gwg_A 6-phosphogluconate dehy 37.4 1.8E+02 0.0061 25.2 8.9 86 99-192 5-100 (484)
482 1kyq_A Met8P, siroheme biosynt 36.8 1.5E+02 0.0053 23.4 7.8 82 97-184 12-130 (274)
483 2pv7_A T-protein [includes: ch 36.8 62 0.0021 25.7 5.6 71 99-192 22-96 (298)
484 1u8x_X Maltose-6'-phosphate gl 35.4 47 0.0016 28.8 4.9 67 99-166 29-112 (472)
485 3vtf_A UDP-glucose 6-dehydroge 35.1 38 0.0013 29.1 4.2 100 98-201 21-149 (444)
486 2vvp_A Ribose-5-phosphate isom 34.9 26 0.00088 25.5 2.7 37 104-141 67-103 (162)
487 1zej_A HBD-9, 3-hydroxyacyl-CO 34.2 1.5E+02 0.0051 23.6 7.4 88 95-193 9-105 (293)
488 3ged_A Short-chain dehydrogena 34.0 1.6E+02 0.0056 22.7 7.5 67 99-185 3-73 (247)
489 1f0y_A HCDH, L-3-hydroxyacyl-C 34.0 56 0.0019 26.0 4.9 88 98-192 15-133 (302)
490 4h0n_A DNMT2; SAH binding, tra 33.8 25 0.00085 28.9 2.8 66 99-164 4-77 (333)
491 4h7p_A Malate dehydrogenase; s 33.3 78 0.0027 26.1 5.7 98 97-195 23-150 (345)
492 3he8_A Ribose-5-phosphate isom 33.2 28 0.00096 25.0 2.6 37 104-141 63-99 (149)
493 4dll_A 2-hydroxy-3-oxopropiona 33.2 1.2E+02 0.0041 24.3 6.8 88 98-194 31-123 (320)
494 2eez_A Alanine dehydrogenase; 33.1 17 0.00057 30.3 1.7 94 98-195 166-266 (369)
495 3s5p_A Ribose 5-phosphate isom 33.0 30 0.001 25.3 2.7 37 104-141 84-120 (166)
496 2jl1_A Triphenylmethane reduct 32.9 1.1E+02 0.0037 23.6 6.5 63 100-165 2-75 (287)
497 3gvp_A Adenosylhomocysteinase 32.8 1E+02 0.0036 26.3 6.5 96 86-194 208-306 (435)
498 3gvi_A Malate dehydrogenase; N 32.7 1.5E+02 0.0052 24.0 7.3 95 98-195 7-124 (324)
499 3abi_A Putative uncharacterize 32.7 2E+02 0.0069 23.4 9.0 61 98-163 16-84 (365)
500 3d64_A Adenosylhomocysteinase; 32.6 77 0.0026 27.6 5.8 83 97-192 276-361 (494)
No 1
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=100.00 E-value=1.6e-43 Score=303.28 Aligned_cols=250 Identities=36% Similarity=0.700 Sum_probs=223.5
Q ss_pred CcccChhchhcccCCCCCChHHHHHHhcChhHHhhhhhHHHHHhCCCCChhhhhcCCCcccccccCchHHHHHHHHHhcC
Q 025363 1 MYSLTEIGKSLVTDVEGLSYAPYVLQHHQDALMSMWPLVHKAILDPTIEPFLKVHGEPAYSYYGKIPEMNGLMRKAMSGV 80 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~ 80 (254)
+|+||+.|+.|+.++++.++++++.+..++.++..|.+|.+++++|+ ++++.++|.++|+++.++|+..+.|+++|...
T Consensus 106 ~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~ 184 (364)
T 3p9c_A 106 SYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGG-IPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNH 184 (364)
T ss_dssp EEEECGGGGGSSCCTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCS-CHHHHHHSSCHHHHHTTCHHHHHHHHHHHHHH
T ss_pred EEecCHHHHHHcCCCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCC-ChHHHhcCCCHHHHHHhCHHHHHHHHHHHHHh
Confidence 39999999999888777899999988777888999999999999998 89999999999999999999999999999988
Q ss_pred CchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeCCCCCCCCCccEE
Q 025363 81 SVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAI 160 (254)
Q Consensus 81 ~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v 160 (254)
+....+.+++.++.+++..+|||||||+|.++..+++++|+++ ++++|+|++++.+++.++|+|+.+|+++++|.+|+|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~v~~~~~D~~~~~p~~D~v 263 (364)
T 3p9c_A 185 SIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIK-GVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTI 263 (364)
T ss_dssp HHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEE
T ss_pred hHHHHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCe-EEEecCHHHHHhhhhcCCeEEEeCCcCCCCCCCCEE
Confidence 8888888999985588889999999999999999999999999 999999999999988899999999999887767999
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHh
Q 025363 161 FMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFF 240 (254)
Q Consensus 161 ~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 240 (254)
++.+++|+|+++++.++|++++++|||||+|+|.|...++.............+++.|+. ...+|++||.+||.++|++
T Consensus 264 ~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~-~~~~g~~rt~~e~~~ll~~ 342 (364)
T 3p9c_A 264 LMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLA-HNPGGRERYEREFQALARG 342 (364)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHH-HCSSCCCCBHHHHHHHHHH
T ss_pred EehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHh-cccCCccCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999988654433222333457888774 3568999999999999999
Q ss_pred CCCCeeeEEEccC
Q 025363 241 AGFPHLRLYRVLD 253 (254)
Q Consensus 241 aGf~~~~~~~~~~ 253 (254)
+||+.+++.++.+
T Consensus 343 AGF~~v~~~~~~~ 355 (364)
T 3p9c_A 343 AGFTGVKSTYIYA 355 (364)
T ss_dssp TTCCEEEEEEEET
T ss_pred CCCceEEEEEcCC
Confidence 9999999998765
No 2
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=100.00 E-value=5.9e-43 Score=300.19 Aligned_cols=250 Identities=38% Similarity=0.726 Sum_probs=223.0
Q ss_pred CcccChhchhcccCCCCCChHHHHHHhcChhHHhhhhhHHHHHhCCCCChhhhhcCCCcccccccCchHHHHHHHHHhcC
Q 025363 1 MYSLTEIGKSLVTDVEGLSYAPYVLQHHQDALMSMWPLVHKAILDPTIEPFLKVHGEPAYSYYGKIPEMNGLMRKAMSGV 80 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~ 80 (254)
+|+||+.|+.|+.++++.++++++.+..++..+..|.+|.+++++|. ++++.++|.++|+|+.++|+..+.|+++|...
T Consensus 108 ~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~ 186 (368)
T 3reo_A 108 LYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGG-IPFNKAYGMNIFDYHGTDHRINKVFNKGMSSN 186 (368)
T ss_dssp EEEECTTHHHHSCCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCS-CHHHHHSSSCHHHHHTTCHHHHHHHHHHHHHH
T ss_pred eeCcCHHHHHHhCCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCC-CHHHHHhCCCHHHHHhhCHHHHHHHHHHHHhh
Confidence 39999999999888777899999988777788999999999999998 89999999999999999999999999999988
Q ss_pred CchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeCCCCCCCCCccEE
Q 025363 81 SVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAI 160 (254)
Q Consensus 81 ~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v 160 (254)
+....+.+++.++.+++..+|||||||+|.++..+++++|+++ ++++|+|.+++.+++.++|+|+.+|+++++|.+|+|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v 265 (368)
T 3reo_A 187 STITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSIN-AINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAI 265 (368)
T ss_dssp HHHHHHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEE
T ss_pred hhhHHHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCE-EEEEehHHHHHhhhhcCCCEEEecCCCCCCCCCCEE
Confidence 8888888999885588889999999999999999999999999 999999999999988889999999999887767999
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHh
Q 025363 161 FMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFF 240 (254)
Q Consensus 161 ~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 240 (254)
++.+++|+|+++++.++|++++++|||||+|+|.|...++.............+++.|+. ...++++||.++|.++|++
T Consensus 266 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~g~~rt~~e~~~ll~~ 344 (368)
T 3reo_A 266 FIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLA-YNPGGKERTEKEFQALAMA 344 (368)
T ss_dssp EEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHH-HSSBCCCCCHHHHHHHHHH
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHh-hcCCCccCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999987654433333334567877775 3457899999999999999
Q ss_pred CCCCeeeEEEccC
Q 025363 241 AGFPHLRLYRVLD 253 (254)
Q Consensus 241 aGf~~~~~~~~~~ 253 (254)
+||+.+++.++.+
T Consensus 345 AGF~~v~~~~~~~ 357 (368)
T 3reo_A 345 SGFRGFKVASCAF 357 (368)
T ss_dssp TTCCEEEEEEEET
T ss_pred CCCeeeEEEEeCC
Confidence 9999999988765
No 3
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=1.6e-43 Score=302.05 Aligned_cols=244 Identities=22% Similarity=0.324 Sum_probs=214.2
Q ss_pred CcccChhchhcccCCCCCChHHHHHHhcChhHHhhhhhHHHHHhCCCCChhhhhcCC---CcccccccCchHHHHHHHHH
Q 025363 1 MYSLTEIGKSLVTDVEGLSYAPYVLQHHQDALMSMWPLVHKAILDPTIEPFLKVHGE---PAYSYYGKIPEMNGLMRKAM 77 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~m 77 (254)
+|+||++++.|+.+.+|.++.+++.+. .+..+..|.+|.+++++|+ +++...+|. ++|+++.++|+....|.++|
T Consensus 83 ~y~~t~~s~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~vr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~aM 160 (353)
T 4a6d_A 83 FYRNTELSSDYLTTVSPTSQCSMLKYM-GRTSYRCWGHLADAVREGR-NQYLETFGVPAEELFTAIYRSEGERLQFMQAL 160 (353)
T ss_dssp EEEECHHHHHHHSTTSTTCCHHHHHHH-HHTHHHHHTTHHHHHHHTS-CCHHHHHSCCCSSHHHHHTSSHHHHHHHHHHH
T ss_pred eeeCCHHHHHHhhcCCchHHHHHHHHh-CHHHHHHHHHHHHHHhcCC-ChhHHhcCCChHHHHHHHhhCHHHHHHHHHHH
Confidence 389999997665555788999988765 4568899999999999998 788888874 56888889999999999999
Q ss_pred hcCCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC------CCcEEEeCCCC
Q 025363 78 SGVSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI------PGVTHIGGDMF 151 (254)
Q Consensus 78 ~~~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~------~~i~~~~~d~~ 151 (254)
...+....+.+++.++ |++..+|||||||+|.++..+++++|+++ ++++|+|++++.+++. +||+|+.+||+
T Consensus 161 ~~~~~~~~~~~~~~~~-~~~~~~v~DvGgG~G~~~~~l~~~~p~~~-~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~ 238 (353)
T 4a6d_A 161 QEVWSVNGRSVLTAFD-LSVFPLMCDLGGGAGALAKECMSLYPGCK-ITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFF 238 (353)
T ss_dssp HTTHHHHHHHHHHSSC-GGGCSEEEEETCTTSHHHHHHHHHCSSCE-EEEEECHHHHHHHHHHSCC--CCSEEEEESCTT
T ss_pred HHHHHHHHHHHHHhcC-cccCCeEEeeCCCCCHHHHHHHHhCCCce-eEeccCHHHHHHHHHhhhhcccCceeeecCccc
Confidence 9988888889999996 99999999999999999999999999999 9999999998876542 78999999999
Q ss_pred CC-CCCccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecC
Q 025363 152 KS-IPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRT 230 (254)
Q Consensus 152 ~~-~p~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 230 (254)
++ .|++|+|+++++||+|+|+++.++|++++++|+|||+|+|.|.+.++....+.. ...+|+.|+. ..+|++||
T Consensus 239 ~~~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~---~~~~dl~ml~--~~~g~ert 313 (353)
T 4a6d_A 239 KDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLL---TQLYSLNMLV--QTEGQERT 313 (353)
T ss_dssp TSCCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHH---HHHHHHHHHH--SSSCCCCC
T ss_pred cCCCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHH---HHHHHHHHHH--hCCCcCCC
Confidence 87 566799999999999999999999999999999999999999998876544332 2457888887 67899999
Q ss_pred HHHHHHHHHhCCCCeeeEEEccC
Q 025363 231 EQEFKQLGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 231 ~~e~~~ll~~aGf~~~~~~~~~~ 253 (254)
.+||+++|++|||+.+++.++.+
T Consensus 314 ~~e~~~ll~~AGf~~v~v~~~~~ 336 (353)
T 4a6d_A 314 PTHYHMLLSSAGFRDFQFKKTGA 336 (353)
T ss_dssp HHHHHHHHHHHTCEEEEEECCSS
T ss_pred HHHHHHHHHHCCCceEEEEEcCC
Confidence 99999999999999999988754
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=100.00 E-value=7.6e-39 Score=272.91 Aligned_cols=243 Identities=24% Similarity=0.389 Sum_probs=211.4
Q ss_pred CcccChhchhcccCCCCCChHHHHHHhcChhHHhhhhhHHHHHhCCCCChhhhhcCCCcccccccCchHHHHHHHHHhcC
Q 025363 1 MYSLTEIGKSLVTDVEGLSYAPYVLQHHQDALMSMWPLVHKAILDPTIEPFLKVHGEPAYSYYGKIPEMNGLMRKAMSGV 80 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~ 80 (254)
+|+||+.|+.|+.+ ++.++++++.++.++..+++|.+|++++++|. ++++..+|.++|+++.++|+..+.|.++|...
T Consensus 91 ~y~~t~~s~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~ 168 (348)
T 3lst_A 91 RFALTDKGAALRSD-SPVPARAGILMFTDTMFWTMSHRVASALGPER-PAFADIFGSSLDAYFDGDAEVEALYYEGMETV 168 (348)
T ss_dssp EEEECTTTGGGSTT-SSSCSHHHHHHHTSHHHHHHHHTHHHHTCTTC-CCHHHHHSSCHHHHHTTCHHHHHHHHHHHHHH
T ss_pred EEecCHHHHHHhcC-CCccHHHHHHHhcCHHHHHHHHHHHHHHhcCC-ChhhHHhCCCHHHHHHhCHHHHHHHHHHHHHh
Confidence 48999999988765 56789999987777778899999999999998 88998999999999999999999999999998
Q ss_pred CchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-----CCcEEEeCCCCCCCC
Q 025363 81 SVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-----PGVTHIGGDMFKSIP 155 (254)
Q Consensus 81 ~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-----~~i~~~~~d~~~~~p 155 (254)
+....+.+++.++ +++..+|||||||+|.++..+++++|+++ ++++|+++++...+.. ++|+++.+|+++++|
T Consensus 169 ~~~~~~~~~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p 246 (348)
T 3lst_A 169 SAAEHLILARAGD-FPATGTVADVGGGRGGFLLTVLREHPGLQ-GVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVP 246 (348)
T ss_dssp HHTTHHHHHHHSC-CCSSEEEEEETCTTSHHHHHHHHHCTTEE-EEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCC
T ss_pred hhhhHHHHHHhCC-ccCCceEEEECCccCHHHHHHHHHCCCCE-EEEecCHHHhhcccccccCCCCCeEEEecCCCCCCC
Confidence 8888889999995 99999999999999999999999999999 9999998877733211 579999999997778
Q ss_pred CccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHH
Q 025363 156 AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFK 235 (254)
Q Consensus 156 ~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 235 (254)
..|+|++.+++|+|+++++.++|++++++|||||+|+|.|...++..... ....+++.|+. ..+++++|.++|.
T Consensus 247 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~----~~~~~d~~~~~--~~~~~~~t~~e~~ 320 (348)
T 3lst_A 247 HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAH----QSKEMDFMMLA--ARTGQERTAAELE 320 (348)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCC----HHHHHHHHHHH--TTSCCCCBHHHHH
T ss_pred CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcc----hhhhcChhhhh--cCCCcCCCHHHHH
Confidence 55999999999999999999999999999999999999999887653211 12356777776 5678999999999
Q ss_pred HHHHhCCCCeeeEEEccC
Q 025363 236 QLGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 236 ~ll~~aGf~~~~~~~~~~ 253 (254)
++++++||+++++.+..+
T Consensus 321 ~ll~~aGf~~~~~~~~~~ 338 (348)
T 3lst_A 321 PLFTAAGLRLDRVVGTSS 338 (348)
T ss_dssp HHHHHTTEEEEEEEECSS
T ss_pred HHHHHCCCceEEEEECCC
Confidence 999999999999887443
No 5
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=100.00 E-value=2.8e-38 Score=270.37 Aligned_cols=249 Identities=30% Similarity=0.493 Sum_probs=213.4
Q ss_pred CcccChhchhcccCCCCCChHHHHHHhcChhHHhhhhhHHHHHhCCC-CChhhhhcCCCcccccccCchHHH--HHHHHH
Q 025363 1 MYSLTEIGKSLVTDVEGLSYAPYVLQHHQDALMSMWPLVHKAILDPT-IEPFLKVHGEPAYSYYGKIPEMNG--LMRKAM 77 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~m 77 (254)
+|+||+.|+.|+.+ ++.++++++.+..++..++.|.+|++++++|+ .++|+.++|.++|+++.++|+..+ .|+..|
T Consensus 95 ~y~~t~~s~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~~g~~~~~~~~~~p~~~~~~~f~~~m 173 (358)
T 1zg3_A 95 AYSLTPPSKLLISG-KPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAM 173 (358)
T ss_dssp EEEECHHHHTTCTT-STTCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHHHHHSSCHHHHHTSGGGHHHHHHHHHHH
T ss_pred EEeCCHHHHHHhCC-CCccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHHHHhCCCHHHHHhcChhhhhHHHHHHHH
Confidence 38999999988876 46789999988777778899999999999983 278988899999999999999999 999999
Q ss_pred hcCCchhHHHHHhhcC-CCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeCCCCCCCCC
Q 025363 78 SGVSVPFMTSVLEGYN-GFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPA 156 (254)
Q Consensus 78 ~~~~~~~~~~i~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~~p~ 156 (254)
...+.... .+++.++ .+++..+|||||||+|.++..+++++|+++ ++++|+|.+++.+++.++|+++.+|+++++|.
T Consensus 174 ~~~~~~~~-~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~ 251 (358)
T 1zg3_A 174 ASDSRMFK-LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLK-CTVFDQPQVVGNLTGNENLNFVGGDMFKSIPS 251 (358)
T ss_dssp HHHHHTHH-HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSE-EEEEECHHHHSSCCCCSSEEEEECCTTTCCCC
T ss_pred hcccHHHH-HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCe-EEEeccHHHHhhcccCCCcEEEeCccCCCCCC
Confidence 88776655 7777772 266778999999999999999999999999 99999999999888777899999999987777
Q ss_pred ccEEEeccccccCCHHHHHHHHHHHHHhCCC---CCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHH
Q 025363 157 ADAIFMKWVLTTWTDDECKLIMENCYKALPA---GGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQE 233 (254)
Q Consensus 157 ~D~v~~~~vlh~~~~~~~~~il~~~~~~L~p---gG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 233 (254)
+|+|++.++||+|+++++.++|++++++|+| ||+|+|.|...++....+........+++.|+. ..+++++|.++
T Consensus 252 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~--~~~g~~~t~~e 329 (358)
T 1zg3_A 252 ADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLT--MFLGKERTKQE 329 (358)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHH--HHSCCCEEHHH
T ss_pred ceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhc--cCCCCCCCHHH
Confidence 8999999999999999999999999999999 999999999887654322111233456777765 56789999999
Q ss_pred HHHHHHhCCCCeeeEEEccCC
Q 025363 234 FKQLGFFAGFPHLRLYRVLDY 254 (254)
Q Consensus 234 ~~~ll~~aGf~~~~~~~~~~~ 254 (254)
|.++++++||+++++.++.|+
T Consensus 330 ~~~ll~~aGf~~~~~~~~~~~ 350 (358)
T 1zg3_A 330 WEKLIYDAGFSSYKITPISGF 350 (358)
T ss_dssp HHHHHHHTTCCEEEEEEETTT
T ss_pred HHHHHHHcCCCeeEEEecCCC
Confidence 999999999999999887653
No 6
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=100.00 E-value=3.7e-38 Score=270.92 Aligned_cols=246 Identities=37% Similarity=0.686 Sum_probs=201.1
Q ss_pred CcccChhchhcccCCCC-CChHHHHHHhcChhHHhhhhhHHHHHhCC-CCChhhhhcCCCcccccccCchHHHHHHHHHh
Q 025363 1 MYSLTEIGKSLVTDVEG-LSYAPYVLQHHQDALMSMWPLVHKAILDP-TIEPFLKVHGEPAYSYYGKIPEMNGLMRKAMS 78 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~g-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~ 78 (254)
+|+||+.++.|+.+ ++ .++++++.+..++..++.|.+|++++++| + ++++.++|.++|+++.++|+....|+..|.
T Consensus 113 ~y~~t~~s~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~ 190 (372)
T 1fp1_D 113 VYGLSMVGKYLVPD-ESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDI-DLFKNVHGVTKYEFMGKDKKMNQIFNKSMV 190 (372)
T ss_dssp EEEECTTGGGGSTT-CTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC---------------CCSSCHHHHHHHHHHHH
T ss_pred eEecCHHHHHHhCC-CCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCC-ChhHHHhCCCHHHHHHhCHHHHHHHHHHHH
Confidence 38999999988876 34 68999998877777889999999999998 6 889888999999999999999999999998
Q ss_pred cCCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeCCCCCCCCCcc
Q 025363 79 GVSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAAD 158 (254)
Q Consensus 79 ~~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~~p~~D 158 (254)
..+....+.+++.++.+++..+|||||||+|.++..+++++|+++ ++++|+|.+++.+++.++|+++.+|+++++|.+|
T Consensus 191 ~~~~~~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~-~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D 269 (372)
T 1fp1_D 191 DVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIK-GINFDLPQVIENAPPLSGIEHVGGDMFASVPQGD 269 (372)
T ss_dssp HHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHTTCCCCTTEEEEECCTTTCCCCEE
T ss_pred hhhHHHHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCe-EEEeChHHHHHhhhhcCCCEEEeCCcccCCCCCC
Confidence 887777788888885478889999999999999999999999999 9999999999998887889999999998777689
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHH
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLG 238 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll 238 (254)
+|++.++||+|+++++.++|++++++|||||+|+|.|...++....+........+++.|+. ..+++++|.++|.+++
T Consensus 270 ~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~t~~e~~~ll 347 (372)
T 1fp1_D 270 AMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI--TVGGRERTEKQYEKLS 347 (372)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHH--HHSCCCEEHHHHHHHH
T ss_pred EEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHh--ccCCccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999887654322211123456776664 4568889999999999
Q ss_pred HhCCCCeeeEEEc
Q 025363 239 FFAGFPHLRLYRV 251 (254)
Q Consensus 239 ~~aGf~~~~~~~~ 251 (254)
+++||+++++.++
T Consensus 348 ~~aGf~~~~~~~~ 360 (372)
T 1fp1_D 348 KLSGFSKFQVACR 360 (372)
T ss_dssp HHTTCSEEEEEEE
T ss_pred HHCCCceEEEEEc
Confidence 9999999998873
No 7
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=100.00 E-value=6e-38 Score=269.27 Aligned_cols=238 Identities=22% Similarity=0.365 Sum_probs=211.6
Q ss_pred cccChhchhcccCCCCCChHHHHHHhcChhHHhhhhhHHHHHhCCCCChhhhhcCCCcccccccCchHHHHHHHHHhcCC
Q 025363 2 YSLTEIGKSLVTDVEGLSYAPYVLQHHQDALMSMWPLVHKAILDPTIEPFLKVHGEPAYSYYGKIPEMNGLMRKAMSGVS 81 (254)
Q Consensus 2 y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~~ 81 (254)
|+||++++.|+.+ ++.++.+++.+..++..+..|.+|.+++++|. +++...+|.++|+++.++|+..+.|.++|....
T Consensus 110 y~~t~~s~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~ 187 (369)
T 3gwz_A 110 FAQNALSAVLLPD-PASPVATDARFQAAPWHWRAWEQLTHSVRTGE-ASFDVANGTSFWQLTHEDPKARELFNRAMGSVS 187 (369)
T ss_dssp EECCHHHHTTSCC-TTCHHHHHHHHHHSHHHHHHHHTHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EecCHHHHHHhcC-CchhHHHHHHHcCCHHHHHHHHhHHHHHhCCC-ChhHhhcCCCHHHHHHhCHHHHHHHHHHHHHHH
Confidence 9999999888665 56789999987766667899999999999998 889888999999999999999999999999888
Q ss_pred chhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCC-------CCCcEEEeCCCCCCC
Q 025363 82 VPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPS-------IPGVTHIGGDMFKSI 154 (254)
Q Consensus 82 ~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~-------~~~i~~~~~d~~~~~ 154 (254)
....+.+++.++ +++..+|||||||+|.++..+++++|+.+ ++++|+|.+++.+++ .++|+|+.+|+++++
T Consensus 188 ~~~~~~l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~ 265 (369)
T 3gwz_A 188 LTEAGQVAAAYD-FSGAATAVDIGGGRGSLMAAVLDAFPGLR-GTLLERPPVAEEARELLTGRGLADRCEILPGDFFETI 265 (369)
T ss_dssp HHHHHHHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCC
T ss_pred hhhHHHHHHhCC-CccCcEEEEeCCCccHHHHHHHHHCCCCe-EEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCC
Confidence 888888999995 88899999999999999999999999999 999999888887764 268999999999777
Q ss_pred CC-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHH
Q 025363 155 PA-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQE 233 (254)
Q Consensus 155 p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 233 (254)
|. +|+|++.+++|+|+++++.++|++++++|||||+|+|.|...++... +. ...+++.|+. ..+++++|.++
T Consensus 266 p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~-~~----~~~~d~~~~~--~~~g~~~t~~e 338 (369)
T 3gwz_A 266 PDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPA-AS----TLFVDLLLLV--LVGGAERSESE 338 (369)
T ss_dssp CSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCC-HH----HHHHHHHHHH--HHSCCCBCHHH
T ss_pred CCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCC-Cc----hhHhhHHHHh--hcCCccCCHHH
Confidence 74 59999999999999999999999999999999999999999876533 22 2456777776 56899999999
Q ss_pred HHHHHHhCCCCeeeEEE
Q 025363 234 FKQLGFFAGFPHLRLYR 250 (254)
Q Consensus 234 ~~~ll~~aGf~~~~~~~ 250 (254)
|.++++++||+++++.+
T Consensus 339 ~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 339 FAALLEKSGLRVERSLP 355 (369)
T ss_dssp HHHHHHTTTEEEEEEEE
T ss_pred HHHHHHHCCCeEEEEEE
Confidence 99999999999999988
No 8
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=100.00 E-value=1.8e-37 Score=264.79 Aligned_cols=246 Identities=31% Similarity=0.483 Sum_probs=210.7
Q ss_pred CcccChhchhcccCCCCCChHHHHHHhcChhHHhhhhhHHHHHh-CCCCChhhhhcCCCcccccccCchHHHHHHHHHhc
Q 025363 1 MYSLTEIGKSLVTDVEGLSYAPYVLQHHQDALMSMWPLVHKAIL-DPTIEPFLKVHGEPAYSYYGKIPEMNGLMRKAMSG 79 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~ 79 (254)
+|+||+.|+.|+.+ ++.++++++.+..++..++.|.+|+++++ +|. ++++.++|.++|+++.++|+..+.|+..|..
T Consensus 93 ~y~~t~~s~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~ 170 (352)
T 1fp2_A 93 SYALTVASELLVRG-SDLCLAPMVECVLDPTLSGSYHELKKWIYEEDL-TLFGVTLGSGFWDFLDKNPEYNTSFNDAMAS 170 (352)
T ss_dssp EEEECHHHHTTSTT-SSSCCHHHHHHHTCHHHHHGGGGHHHHHTCSSC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHHHH
T ss_pred eEeCCHHHHHHhCC-CCccHHHHHHHhcCchHHHHHHHHHHHHHhcCC-ChHHHHcCCCHHHHHHhChHHHHHHHHHHHh
Confidence 48999999988876 45789999988777778899999999999 777 8899889999999999999999999999998
Q ss_pred CCchhHHHHHhhcC-CCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeCCCCCCCCCcc
Q 025363 80 VSVPFMTSVLEGYN-GFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAAD 158 (254)
Q Consensus 80 ~~~~~~~~i~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~~p~~D 158 (254)
......+. ++.++ .+++..+|||||||+|.++..+++++|+.+ ++++|+|.+++.+++.++|+++.+|+++++|..|
T Consensus 171 ~~~~~~~~-~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D 248 (352)
T 1fp2_A 171 DSKLINLA-LRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLK-CIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNAD 248 (352)
T ss_dssp THHHHHHH-HHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHTTCCCBTTEEEEECCTTTCCCCCS
T ss_pred cchhhhhH-HHhcccccccCceEEEeCCCccHHHHHHHHHCCCCe-EEEeeCHHHHhhcccCCCcEEEeccccCCCCCcc
Confidence 87766666 77671 267789999999999999999999999999 9999999999998877789999999998877789
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCC---CCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHH
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPA---GGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFK 235 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~p---gG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 235 (254)
+|++.+++|+|+++++.++|++++++||| ||+|+|.|...++....+........+++.|+. .++++++.++|.
T Consensus 249 ~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~---~~g~~~t~~e~~ 325 (352)
T 1fp2_A 249 AVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC---LNGKERNEEEWK 325 (352)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG---GTCCCEEHHHHH
T ss_pred EEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh---ccCCCCCHHHHH
Confidence 99999999999999999999999999999 999999999887653321111122345666664 247889999999
Q ss_pred HHHHhCCCCeeeEEEccC
Q 025363 236 QLGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 236 ~ll~~aGf~~~~~~~~~~ 253 (254)
++++++||+++++.++.|
T Consensus 326 ~ll~~aGf~~~~~~~~~~ 343 (352)
T 1fp2_A 326 KLFIEAGFQHYKISPLTG 343 (352)
T ss_dssp HHHHHTTCCEEEEEEEET
T ss_pred HHHHHCCCCeeEEEecCC
Confidence 999999999999888765
No 9
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=100.00 E-value=3.2e-38 Score=267.40 Aligned_cols=240 Identities=22% Similarity=0.298 Sum_probs=207.6
Q ss_pred CcccChhchhcccCCCCCChHHHHHHhcChhHH-hhhhhHHHHHhCCCCChhhhhcCCCcccccccCchHHHHHHHHHhc
Q 025363 1 MYSLTEIGKSLVTDVEGLSYAPYVLQHHQDALM-SMWPLVHKAILDPTIEPFLKVHGEPAYSYYGKIPEMNGLMRKAMSG 79 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~ 79 (254)
+|++|++|+.|+.+ ++.++.+++.+..+...+ +.|.+|++++++|. ++|+..+|.++|+++.++|+....|...|..
T Consensus 75 ~y~~t~~s~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~ 152 (332)
T 3i53_A 75 VYGLTEFGEQLRDD-HAAGKRKWLDMNSAVGRGDLGFVELAHSIRTGQ-PAYPVRYGTSFWEDLGSDPVLSASFDTLMSH 152 (332)
T ss_dssp BEEECTTGGGGSTT-CTTCCHHHHCTTSHHHHHGGGGGGHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHH
T ss_pred eEEcCHhHHHHhcC-CchhHHHHHHHcCCHhHHHHHHHHhHHHHhcCC-CHHHHhhCCCHHHHHHhCHHHHHHHHHHHHH
Confidence 48999999988765 567899998776554566 89999999999998 8898889999999999999999999999998
Q ss_pred CCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCCCC
Q 025363 80 VSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFK 152 (254)
Q Consensus 80 ~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~~~ 152 (254)
.+....+.+++.++ +++..+|||||||+|.++..+++++|+.+ ++++|+|.+++.+++. ++|+|+.+|+++
T Consensus 153 ~~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 230 (332)
T 3i53_A 153 HLELDYTGIAAKYD-WAALGHVVDVGGGSGGLLSALLTAHEDLS-GTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFD 230 (332)
T ss_dssp HHHHHHTTGGGSSC-CGGGSEEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred hHHhhHHHHHHhCC-CCCCCEEEEeCCChhHHHHHHHHHCCCCe-EEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCC
Confidence 77766777888885 88889999999999999999999999999 9999999888887642 689999999997
Q ss_pred CCCC-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCH
Q 025363 153 SIPA-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTE 231 (254)
Q Consensus 153 ~~p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 231 (254)
++|. .|+|++++++|+|+++++.++|++++++|+|||+|+|.|...++. . + ...+++.|+. ..+++++|.
T Consensus 231 ~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~-~-----~~~~d~~~~~--~~~~~~~t~ 301 (332)
T 3i53_A 231 PLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-H-A-----GTGMDLRMLT--YFGGKERSL 301 (332)
T ss_dssp CCCCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-----C-----CHHHHHHHHH--HHSCCCCCH
T ss_pred CCCCCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-C-c-----cHHHHHHHHh--hCCCCCCCH
Confidence 7774 599999999999999999999999999999999999999987754 1 1 1356777775 567899999
Q ss_pred HHHHHHHHhCCCCeeeEEEccC
Q 025363 232 QEFKQLGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 232 ~e~~~ll~~aGf~~~~~~~~~~ 253 (254)
++|.++++++||+++++.++.+
T Consensus 302 ~e~~~ll~~aGf~~~~~~~~~~ 323 (332)
T 3i53_A 302 AELGELAAQAGLAVRAAHPISY 323 (332)
T ss_dssp HHHHHHHHHTTEEEEEEEECSS
T ss_pred HHHHHHHHHCCCEEEEEEECCC
Confidence 9999999999999999987643
No 10
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.7e-36 Score=255.75 Aligned_cols=239 Identities=24% Similarity=0.365 Sum_probs=206.3
Q ss_pred CcccChhchhcccCCCCCChHHHHHHhcChhHHhhhhhHHHHHhCCCCChhhhhcCCCcccccccCchHHHHHHHHHhcC
Q 025363 1 MYSLTEIGKSLVTDVEGLSYAPYVLQHHQDALMSMWPLVHKAILDPTIEPFLKVHGEPAYSYYGKIPEMNGLMRKAMSGV 80 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~ 80 (254)
+|++|+.++.|+ + +|.++.+++.+..++.. +.|.+|.+++++|+ ++++..+|.++|+++.++|+..+.|+..| ..
T Consensus 78 ~y~~t~~s~~l~-~-~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m-~~ 152 (334)
T 2ip2_A 78 GYANTPTSHLLR-D-VEGSFRDMVLFYGEEFH-AAWTPACEALLSGT-PGFELAFGEDFYSYLKRCPDAGRRFLLAM-KA 152 (334)
T ss_dssp EEEECHHHHTTS-S-STTCSHHHHHHHTTHHH-HHTTTHHHHHHHCC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHH-GG
T ss_pred eEecCHHHHHHh-C-CCccHHHHHHHhcCchh-hHHHHHHHHHhcCC-ChhhhhcCCCHHHHHhhChHHHHHHHHHH-HH
Confidence 389999998888 4 46789999987766544 89999999999998 88988889999999999999999999999 88
Q ss_pred CchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCCCCC
Q 025363 81 SVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS 153 (254)
Q Consensus 81 ~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~~~~ 153 (254)
+....+.+++.++ +++ .+|||||||+|..+..+++++|+.+ ++++|+|.+++.+++. ++|+++.+|++++
T Consensus 153 ~~~~~~~~~~~~~-~~~-~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 229 (334)
T 2ip2_A 153 SNLAFHEIPRLLD-FRG-RSFVDVGGGSGELTKAILQAEPSAR-GVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQE 229 (334)
T ss_dssp GHHHHHHHHHHSC-CTT-CEEEEETCTTCHHHHHHHHHCTTCE-EEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTC
T ss_pred HHHHHHHHHHhCC-CCC-CEEEEeCCCchHHHHHHHHHCCCCE-EEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCC
Confidence 8777888999985 887 9999999999999999999999999 9999998887776543 5899999999988
Q ss_pred CCC-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHH
Q 025363 154 IPA-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQ 232 (254)
Q Consensus 154 ~p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 232 (254)
+|. .|+|++.+++|+|+++++.++|++++++|+|||+|++.|...++... +. ....+++.|+. ..++++++.+
T Consensus 230 ~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~---~~~~~~~~~~~--~~~~~~~t~~ 303 (334)
T 2ip2_A 230 VPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP-SP---MSVLWDVHLFM--ACAGRHRTTE 303 (334)
T ss_dssp CCSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSC-CH---HHHHHHHHHHH--HHSCCCCBHH
T ss_pred CCCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC-cc---hhHHhhhHhHh--hCCCcCCCHH
Confidence 776 49999999999999999999999999999999999999998875432 21 22345666665 4568899999
Q ss_pred HHHHHHHhCCCCeeeEEEccC
Q 025363 233 EFKQLGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 233 e~~~ll~~aGf~~~~~~~~~~ 253 (254)
+|.++++++||+++++.++.+
T Consensus 304 e~~~ll~~aGf~~~~~~~~~~ 324 (334)
T 2ip2_A 304 EVVDLLGRGGFAVERIVDLPM 324 (334)
T ss_dssp HHHHHHHHTTEEEEEEEEETT
T ss_pred HHHHHHHHCCCceeEEEECCC
Confidence 999999999999999887654
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=100.00 E-value=9.8e-35 Score=248.78 Aligned_cols=241 Identities=18% Similarity=0.200 Sum_probs=187.6
Q ss_pred CcccChhchhcccCCCCCChHHHHHHhcChhHHhhhhhHHHHHhCCCCChhhhhcC--CCcccccccCchHHHH----HH
Q 025363 1 MYSLTEIGKSLVTDVEGLSYAPYVLQHHQDALMSMWPLVHKAILDPTIEPFLKVHG--EPAYSYYGKIPEMNGL----MR 74 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g--~~~~~~~~~~~~~~~~----~~ 74 (254)
+|+||+.|++|+.++ ....++. +..+..+++|.+|++++++|+ +++...+| .++|+++.++|+..+. |+
T Consensus 86 ~y~~t~~s~~L~~~~---~~~~~~~-~~~~~~~~~~~~L~~~lr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~f~ 160 (363)
T 3dp7_A 86 RYVLAKAGWFLLNDK---MARVNME-FNHDVNYQGLFHLEEALLNGR-PEGLKVFGEWPTIYEGLSQLPEQVQKSWFGFD 160 (363)
T ss_dssp EEEECHHHHHHHHCH---HHHHHHH-HHHHTTHHHHTTHHHHHHHSS-CGGGGGTCCCSSHHHHGGGSCHHHHHHHHHHH
T ss_pred EEecccchHHhhCCC---cccchhe-eecHHhhhhHHHHHHHHhcCC-CccccccCchHhHHHHHhhCHHHHHHHHHHHH
Confidence 499999999888763 2233333 334668899999999999998 77777787 6889999999987663 66
Q ss_pred HHHhcCCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEe
Q 025363 75 KAMSGVSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIG 147 (254)
Q Consensus 75 ~~m~~~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~ 147 (254)
..|..... ..++..+. ..+..+|||||||+|.++..+++++|+++ ++++|+|.+++.+++. +||+|+.
T Consensus 161 ~~~~~~~~---~~~l~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~ 235 (363)
T 3dp7_A 161 HFYSDQSF---GKALEIVF-SHHPKRLLDIGGNTGKWATQCVQYNKEVE-VTIVDLPQQLEMMRKQTAGLSGSERIHGHG 235 (363)
T ss_dssp HHTTCCCC---HHHHHHHG-GGCCSEEEEESCTTCHHHHHHHHHSTTCE-EEEEECHHHHHHHHHHHTTCTTGGGEEEEE
T ss_pred HHhhhhhH---HHHHHHhc-ccCCCEEEEeCCCcCHHHHHHHHhCCCCE-EEEEeCHHHHHHHHHHHHhcCcccceEEEE
Confidence 66654332 23444442 35678999999999999999999999999 9999999888877643 5799999
Q ss_pred CCCCCC---CCC-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChh-hhhhcccchHhhhhcc
Q 025363 148 GDMFKS---IPA-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQ-RTRALLEGDIFVMTIY 222 (254)
Q Consensus 148 ~d~~~~---~p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 222 (254)
+|++++ +|+ .|+|++.+++|+|+++++.++|++++++|||||+|+|.|...++...... ........++.++.
T Consensus 236 ~d~~~~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~-- 313 (363)
T 3dp7_A 236 ANLLDRDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMA-- 313 (363)
T ss_dssp CCCCSSSCCCCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSS--
T ss_pred ccccccCCCCCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhh--
Confidence 999985 564 49999999999999999999999999999999999999998876532111 00111223343443
Q ss_pred ccCceecCHHHHHHHHHhCCCCeeeEEEccC
Q 025363 223 RAKGNHRTEQEFKQLGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 223 ~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~ 253 (254)
..+++++|.++|.++|+++||+++++.+..|
T Consensus 314 ~~~~~~~t~~e~~~ll~~AGf~~v~~~~~~g 344 (363)
T 3dp7_A 314 NGNSKMFHSDDLIRCIENAGLEVEEIQDNIG 344 (363)
T ss_dssp CSSCCSCCHHHHHHHHHTTTEEESCCCCCBT
T ss_pred CCCCcccCHHHHHHHHHHcCCeEEEEEeCCC
Confidence 4567889999999999999999999887655
No 12
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=100.00 E-value=1.7e-34 Score=248.27 Aligned_cols=243 Identities=21% Similarity=0.280 Sum_probs=204.1
Q ss_pred CcccChhchhcccCCCCCChHHHHHHhcChhHH-hhhhhHHHHHhCCCCChhhhhcCCCcccccccCchHHHHHHHHHhc
Q 025363 1 MYSLTEIGKSLVTDVEGLSYAPYVLQHHQDALM-SMWPLVHKAILDPTIEPFLKVHGEPAYSYYGKIPEMNGLMRKAMSG 79 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~ 79 (254)
+|++|+.++.|+.+ ++.++++++.+..++..+ ..|.+|.+++++|. +++...+|.++|+++.++|+....|...|..
T Consensus 88 ~y~~t~~s~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~~~~ 165 (374)
T 1qzz_A 88 PLRPTRLGMLLADG-HPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGR-PAYAGRYGRPFWEDLSADVALADSFDALMSC 165 (374)
T ss_dssp CCEECTTGGGGSTT-CTTCHHHHHCTTSHHHHHHGGGGGHHHHHHHSC-CSHHHHHSSCHHHHHHHCHHHHHHHHHTCGG
T ss_pred EEEEChHHHhhcCC-CcccHHHHHHHcCChhhHHHHHHHHHHHHhcCC-ChhhhhhCCCHHHHHhhChHHHHHHHHHHHH
Confidence 49999999988876 467888988766544567 89999999999998 7788888999999999999999999999998
Q ss_pred CCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCCCC
Q 025363 80 VSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFK 152 (254)
Q Consensus 80 ~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~~~ 152 (254)
......+.+++.++ +.+..+|||||||+|.++..+++++|+.+ ++++|++.+++.+++. ++|+++.+|+++
T Consensus 166 ~~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~~~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 243 (374)
T 1qzz_A 166 DEDLAYEAPADAYD-WSAVRHVLDVGGGNGGMLAAIALRAPHLR-GTLVELAGPAERARRRFADAGLADRVTVAEGDFFK 243 (374)
T ss_dssp GSTTTTHHHHHTSC-CTTCCEEEEETCTTSHHHHHHHHHCTTCE-EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred hhHhHHHHHHHhCC-CCCCCEEEEECCCcCHHHHHHHHHCCCCE-EEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 88878888999985 88889999999999999999999999999 9999998888877642 489999999998
Q ss_pred CCCC-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc--ccCCCCCChhhhhhcccchHhhhhccccCceec
Q 025363 153 SIPA-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP--VLPDDSNESQRTRALLEGDIFVMTIYRAKGNHR 229 (254)
Q Consensus 153 ~~p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (254)
++|. .|+|++.+++|+|+++++.++|++++++|||||+|++.|. ..++... +. ....+++.++. ..+++.+
T Consensus 244 ~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~---~~~~~~~~~~~--~~~~~~~ 317 (374)
T 1qzz_A 244 PLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGAD-RF---FSTLLDLRMLT--FMGGRVR 317 (374)
T ss_dssp CCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH--------HH---HHHHHHHHHHH--HHSCCCC
T ss_pred cCCCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCC-cc---hhhhcchHHHH--hCCCcCC
Confidence 7776 4999999999999999989999999999999999999998 7654321 11 12345666654 4568889
Q ss_pred CHHHHHHHHHhCCCCeeeEEEccC
Q 025363 230 TEQEFKQLGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 230 t~~e~~~ll~~aGf~~~~~~~~~~ 253 (254)
+.++|.++++++||+++++..+.+
T Consensus 318 ~~~~~~~ll~~aGf~~~~~~~~~~ 341 (374)
T 1qzz_A 318 TRDEVVDLAGSAGLALASERTSGS 341 (374)
T ss_dssp CHHHHHHHHHTTTEEEEEEEEECC
T ss_pred CHHHHHHHHHHCCCceEEEEECCC
Confidence 999999999999999999887654
No 13
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=100.00 E-value=2.4e-34 Score=246.15 Aligned_cols=243 Identities=22% Similarity=0.361 Sum_probs=205.9
Q ss_pred CcccChhchhcccCCCCCChHHHHHHhcChh-HHhhhhhHHHHHhCCCCChhhhhcCCCcccccccCchHHHHHHHHHhc
Q 025363 1 MYSLTEIGKSLVTDVEGLSYAPYVLQHHQDA-LMSMWPLVHKAILDPTIEPFLKVHGEPAYSYYGKIPEMNGLMRKAMSG 79 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~ 79 (254)
+|++|+.++.|+.+ ++.++++++.+..++. .+..|.+|.+.+++|. ++++..+|.++|+++..+|+....|...|..
T Consensus 89 ~y~~t~~s~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~p~~~~~f~~~~~~ 166 (360)
T 1tw3_A 89 EFVPTEVGELLADD-HPAAQRAWHDLTQAVARADISFTRLPDAIRTGR-PTYESIYGKPFYEDLAGRPDLRASFDSLLAC 166 (360)
T ss_dssp EEEECTTGGGGSTT-STTCHHHHTCTTSHHHHHGGGGGGHHHHHHHCC-CCHHHHHSSCHHHHHHTCHHHHHHHHHHHTT
T ss_pred eEEeCHHHHHHhcC-CchhHHHHHHHhcCchhHHHHHHHHHHHHHcCC-CHHHHhcCCCHHHHHHhChHHHHHHHHHHHH
Confidence 38999999988876 4678888887655443 6789999999999997 7788888999999998999999999999998
Q ss_pred CCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCCCC
Q 025363 80 VSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFK 152 (254)
Q Consensus 80 ~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~~~ 152 (254)
......+.+++.++ +.+..+|||||||+|.++..+++++|+++ ++++|++.+++.+++. ++|+++.+|+++
T Consensus 167 ~~~~~~~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~~~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 244 (360)
T 1tw3_A 167 DQDVAFDAPAAAYD-WTNVRHVLDVGGGKGGFAAAIARRAPHVS-ATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFE 244 (360)
T ss_dssp TTTTTTHHHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCTTCE-EEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHhHHHHHHhCC-CccCcEEEEeCCcCcHHHHHHHHhCCCCE-EEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 88888888999995 88889999999999999999999999999 9999988787766542 489999999998
Q ss_pred CCCC-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc-cCCCCCChhhhhhcccchHhhhhccccCceecC
Q 025363 153 SIPA-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV-LPDDSNESQRTRALLEGDIFVMTIYRAKGNHRT 230 (254)
Q Consensus 153 ~~p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 230 (254)
++|. .|+|++.+++|+|+++++.++|++++++|||||+|++.|.. .++..... ....+++.|+. ..+++.++
T Consensus 245 ~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~t 318 (360)
T 1tw3_A 245 PLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNE----QFTELDLRMLV--FLGGALRT 318 (360)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSH----HHHHHHHHHHH--HHSCCCCB
T ss_pred CCCCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcc----hhhhccHHHhh--hcCCcCCC
Confidence 7776 49999999999999999999999999999999999999988 65432211 11245666654 45688899
Q ss_pred HHHHHHHHHhCCCCeeeEEEccC
Q 025363 231 EQEFKQLGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 231 ~~e~~~ll~~aGf~~~~~~~~~~ 253 (254)
.++|.++++++||+++++.++.+
T Consensus 319 ~~e~~~ll~~aGf~~~~~~~~~~ 341 (360)
T 1tw3_A 319 REKWDGLAASAGLVVEEVRQLPS 341 (360)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHHHHHHCCCeEEEEEeCCC
Confidence 99999999999999999887654
No 14
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=100.00 E-value=9.6e-33 Score=235.54 Aligned_cols=233 Identities=17% Similarity=0.239 Sum_probs=188.2
Q ss_pred CcccChhchhcccCCCCCChHHHHHHhcChhHHhhhhhHHHHHhCCCCChhhhhcCCCcccccccCchHHHHHHHHHhcC
Q 025363 1 MYSLTEIGKSLVTDVEGLSYAPYVLQHHQDALMSMWPLVHKAILDPTIEPFLKVHGEPAYSYYGKIPEMNGLMRKAMSGV 80 (254)
Q Consensus 1 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~ 80 (254)
+|+||+.++.++.++++.++++++.+. ...++.|.+|++++++|.+..|+.. .++..+|+....|..+|...
T Consensus 92 ~y~~t~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~g~~~~f~~~------~~~~~~~~~~~~f~~~m~~~ 163 (352)
T 3mcz_A 92 AFRNTALTERYLTTTSADYIGPIVEHQ--YLQWDNWPRLGEILRSEKPLAFQQE------SRFAHDTRARDAFNDAMVRL 163 (352)
T ss_dssp EEEECHHHHHHHSTTCTTCCHHHHHHH--HTTTTTGGGHHHHHTCSSCCTTSHH------HHTTTCHHHHHHHHHHHHHH
T ss_pred eeecCHHHHhhccCCChhhHHHHHHHh--HHHHHHHHHHHHHHhCCCCCCcccc------cccccCHHHHHHHHHHHHhh
Confidence 489999997655555678888887654 3478899999999999974433322 23467888899999999873
Q ss_pred CchhHHHHHhhcCCCCC-CCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCCCC
Q 025363 81 SVPFMTSVLEGYNGFKG-VKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFK 152 (254)
Q Consensus 81 ~~~~~~~i~~~~~~~~~-~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~~~ 152 (254)
... ...+++.++ +.+ ..+|||||||+|.++..+++++|+.+ ++++|+|.+++.+++. +||+++.+|+++
T Consensus 164 ~~~-~~~~l~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 240 (352)
T 3mcz_A 164 SQP-MVDVVSELG-VFARARTVIDLAGGHGTYLAQVLRRHPQLT-GQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLD 240 (352)
T ss_dssp HHH-HHHHHHTCG-GGTTCCEEEEETCTTCHHHHHHHHHCTTCE-EEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTC
T ss_pred hhh-HHHHHHhCC-CcCCCCEEEEeCCCcCHHHHHHHHhCCCCe-EEEEECHHHHHHHHHHHHhcCCCCceEEEeCCccc
Confidence 222 347888886 777 89999999999999999999999999 9999998887766542 579999999998
Q ss_pred C---CCC-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCcee
Q 025363 153 S---IPA-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNH 228 (254)
Q Consensus 153 ~---~p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (254)
. .+. .|+|++.+++|+|+++++.++|++++++|||||+|++.|...++....+.. ...+++.|+. ...++++
T Consensus 241 ~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~ 316 (352)
T 3mcz_A 241 ARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPAL---SADFSLHMMV-NTNHGEL 316 (352)
T ss_dssp GGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHH---HHHHHHHHHH-HSTTCCC
T ss_pred CcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCch---HHHhhHHHHh-hCCCCCc
Confidence 7 344 499999999999999999999999999999999999999988765433222 2356776665 3457889
Q ss_pred cCHHHHHHHHHhCCCCeeeE
Q 025363 229 RTEQEFKQLGFFAGFPHLRL 248 (254)
Q Consensus 229 ~t~~e~~~ll~~aGf~~~~~ 248 (254)
+|.++|.++++++||++++.
T Consensus 317 ~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 317 HPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp CCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHCCCceeee
Confidence 99999999999999998874
No 15
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=100.00 E-value=1.6e-32 Score=232.56 Aligned_cols=239 Identities=16% Similarity=0.114 Sum_probs=199.9
Q ss_pred CcccChhc-hhcccCCCCCChHHHHHHhcChhHHhhhhhHHHHHhCCCCChhhhhcCCCcccccccCchHHHHHHHHHhc
Q 025363 1 MYSLTEIG-KSLVTDVEGLSYAPYVLQHHQDALMSMWPLVHKAILDPTIEPFLKVHGEPAYSYYGKIPEMNGLMRKAMSG 79 (254)
Q Consensus 1 ~y~~t~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~ 79 (254)
+|++|+.+ ++|..+ ++.++.+++.+..++..++.|.+|.+++++|. ++++ + |+++.++++....|...|..
T Consensus 75 ~y~~t~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~-----~-~~~~~~~~~~~~~~~~~~~~ 146 (335)
T 2r3s_A 75 GYRLTSDSAMFLDRQ-SKFYVGDAIEFLLSPMITNGFNDLTAAVLKGG-TAIS-----S-EGTLSPEHPVWVQFAKAMSP 146 (335)
T ss_dssp EEEECHHHHHHTCTT-STTCCGGGHHHHTCHHHHGGGTTHHHHHHHTS-CCST-----T-TGGGSTTCTHHHHHHHHSGG
T ss_pred EEecCHHHHHHhccC-CcHHHHHHHHHhcchhhHHHHHhHHHHHhcCC-CCCC-----C-cccccCCHHHHHHHHHHHHH
Confidence 48999999 677665 56788898887765568899999999999987 5443 3 78888899999999999998
Q ss_pred CCchhHHHHHhhcCCC--CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCC
Q 025363 80 VSVPFMTSVLEGYNGF--KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDM 150 (254)
Q Consensus 80 ~~~~~~~~i~~~~~~~--~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~ 150 (254)
........+++.++ + .+..+|||||||+|.++..+++++|+.+ ++++|++.+++.+++. ++|+++.+|+
T Consensus 147 ~~~~~~~~~~~~~~-~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 224 (335)
T 2r3s_A 147 MMANPAQLIAQLVN-ENKIEPLKVLDISASHGLFGIAVAQHNPNAE-IFGVDWASVLEVAKENARIQGVASRYHTIAGSA 224 (335)
T ss_dssp GGHHHHHHHHHHHT-C--CCCSEEEEETCTTCHHHHHHHHHCTTCE-EEEEECHHHHHHHHHHHHHHTCGGGEEEEESCT
T ss_pred HHhhhHHHHHHhcc-cccCCCCEEEEECCCcCHHHHHHHHHCCCCe-EEEEecHHHHHHHHHHHHhcCCCcceEEEeccc
Confidence 88877888898885 7 8889999999999999999999999999 9999998887776653 4799999999
Q ss_pred CCC-CCC-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCcee
Q 025363 151 FKS-IPA-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNH 228 (254)
Q Consensus 151 ~~~-~p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (254)
++. ++. .|+|++.+++|+|+++++.++|++++++|+|||++++.|...++....+. ....+++.|+. ...+++.
T Consensus 225 ~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~ 300 (335)
T 2r3s_A 225 FEVDYGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPP---DAAAFSLVMLA-TTPNGDA 300 (335)
T ss_dssp TTSCCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSH---HHHHHHHHHHH-HSSSCCC
T ss_pred ccCCCCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCch---HHHHHHHHHHe-eCCCCCc
Confidence 985 665 49999999999999999999999999999999999999998775433222 12345666665 3347889
Q ss_pred cCHHHHHHHHHhCCCCeeeEEEccC
Q 025363 229 RTEQEFKQLGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 229 ~t~~e~~~ll~~aGf~~~~~~~~~~ 253 (254)
++.++|.++++++||+.+++.++.+
T Consensus 301 ~t~~~~~~ll~~aGf~~~~~~~~~~ 325 (335)
T 2r3s_A 301 YTFAEYESMFSNAGFSHSQLHSLPT 325 (335)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCTT
T ss_pred CCHHHHHHHHHHCCCCeeeEEECCC
Confidence 9999999999999999999988764
No 16
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=100.00 E-value=4.4e-32 Score=232.06 Aligned_cols=229 Identities=17% Similarity=0.267 Sum_probs=189.1
Q ss_pred CcccChhc-hhcccCCCC---CChHHHHHHhcChhHHhhhhhHHHHHhCCCCChhhhhcCCCcccccccCch---HHHHH
Q 025363 1 MYSLTEIG-KSLVTDVEG---LSYAPYVLQHHQDALMSMWPLVHKAILDPTIEPFLKVHGEPAYSYYGKIPE---MNGLM 73 (254)
Q Consensus 1 ~y~~t~~~-~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~~~~---~~~~~ 73 (254)
+|++|+.+ ++|+.+ ++ .++++++.+. .+..++.|.+|++++++|. + |+++.++|+ ..+.|
T Consensus 100 ~y~~t~~~~~~l~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~l~~g~-~----------~~~~~~~p~~~~~~~~f 166 (359)
T 1x19_A 100 KWSLTEFADYMFSPT-PKEPNLHQTPVAKAM-AFLADDFYMGLSQAVRGQK-N----------FKGQVPYPPVTREDNLY 166 (359)
T ss_dssp EEEECHHHHHHSSSS-CSBTTBCCHHHHHHH-HHHHHHTGGGHHHHHTTSC-C----------CCCSSCSSCCSHHHHHH
T ss_pred eEecCHHHHHHhcCC-CCCccccHHHHHHHH-HHHHHHHHHHHHHHHhcCC-C----------CcccccCchhhHHHHHH
Confidence 48999976 566554 55 6788888765 4568899999999999886 2 667778888 99999
Q ss_pred HHHHhcCCc-hhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEE
Q 025363 74 RKAMSGVSV-PFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTH 145 (254)
Q Consensus 74 ~~~m~~~~~-~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~ 145 (254)
...|..... ...+.+++.++ +.+..+|||||||+|.++..+++++|+.+ ++++|+|.+++.+++. ++|++
T Consensus 167 ~~~m~~~~~~~~~~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~ 244 (359)
T 1x19_A 167 FEEIHRSNAKFAIQLLLEEAK-LDGVKKMIDVGGGIGDISAAMLKHFPELD-STILNLPGAIDLVNENAAEKGVADRMRG 244 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHCC-CTTCCEEEEESCTTCHHHHHHHHHCTTCE-EEEEECGGGHHHHHHHHHHTTCTTTEEE
T ss_pred HHHHHHhccchhHHHHHHhcC-CCCCCEEEEECCcccHHHHHHHHHCCCCe-EEEEecHHHHHHHHHHHHhcCCCCCEEE
Confidence 999999888 88889999995 88899999999999999999999999999 9999998888877642 57999
Q ss_pred EeCCCCCC-CCCccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhcccc
Q 025363 146 IGGDMFKS-IPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRA 224 (254)
Q Consensus 146 ~~~d~~~~-~p~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (254)
+.+|+++. ++++|+|++.+++|+|+++++.++|++++++|||||+|++.|...++. ..+... ..+ .++. ...
T Consensus 245 ~~~d~~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~~~---~~~--~~~~-~~~ 317 (359)
T 1x19_A 245 IAVDIYKESYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP-ENPNFD---YLS--HYIL-GAG 317 (359)
T ss_dssp EECCTTTSCCCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT-TSCCHH---HHH--HHGG-GGG
T ss_pred EeCccccCCCCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC-CCchHH---HHH--HHHH-hcC
Confidence 99999986 555699999999999999999999999999999999999999887654 212111 111 2322 123
Q ss_pred Ccee----cCHHHHHHHHHhCCCCeeeEEEc
Q 025363 225 KGNH----RTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 225 ~~~~----~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
++++ ++.++|.++++++||+++++.++
T Consensus 318 ~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~~ 348 (359)
T 1x19_A 318 MPFSVLGFKEQARYKEILESLGYKDVTMVRK 348 (359)
T ss_dssp SSCCCCCCCCGGGHHHHHHHHTCEEEEEEEE
T ss_pred CCCcccCCCCHHHHHHHHHHCCCceEEEEec
Confidence 4666 89999999999999999988775
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.87 E-value=1.6e-21 Score=159.13 Aligned_cols=158 Identities=20% Similarity=0.228 Sum_probs=116.1
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc--CCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC-CC
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH--RFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IP 155 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~--~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~-~p 155 (254)
.+++.+ .+++.+|||||||+|..+..+++++ ++++ ++++|+ +.|++.++++ .+|+++.+|+.+. ++
T Consensus 62 ~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~-v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~ 138 (261)
T 4gek_A 62 MLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCK-IIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE 138 (261)
T ss_dssp HHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCE-EEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC
T ss_pred HHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCE-EEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc
Confidence 344444 5678999999999999999999986 5678 999999 9999887642 5899999999875 45
Q ss_pred CccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhcccc-----------
Q 025363 156 AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRA----------- 224 (254)
Q Consensus 156 ~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 224 (254)
..|+|++..+||++++++...+|++++++|||||+|++.|............ ......++....-...
T Consensus 139 ~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~-~~~~~~~~~~~~g~s~~ei~~~~~~l~ 217 (261)
T 4gek_A 139 NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGEL-LFNMHHDFKRANGYSELEISQKRSMLE 217 (261)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHH-HHHHHHHHHHHTTGGGSTTHHHHHHHH
T ss_pred ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHH-HHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 5699999999999999888899999999999999999999877654210000 0000001000000000
Q ss_pred -CceecCHHHHHHHHHhCCCCeeeE
Q 025363 225 -KGNHRTEQEFKQLGFFAGFPHLRL 248 (254)
Q Consensus 225 -~~~~~t~~e~~~ll~~aGf~~~~~ 248 (254)
.-...|.+++.++|+++||+.+++
T Consensus 218 ~~~~~~s~~~~~~~L~~AGF~~ve~ 242 (261)
T 4gek_A 218 NVMLTDSVETHKARLHKAGFEHSEL 242 (261)
T ss_dssp HHCCCBCHHHHHHHHHHHTCSEEEE
T ss_pred ccccCCCHHHHHHHHHHcCCCeEEE
Confidence 012258899999999999998875
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.84 E-value=3.3e-20 Score=148.94 Aligned_cols=164 Identities=13% Similarity=0.033 Sum_probs=119.9
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCC-CCCc-
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPAA- 157 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~-~p~~- 157 (254)
.+.+++.++...++.+|||||||+|.++..+++.+|+.+ ++++|+ +.+++.+++. .+++++.+|+.+. .++.
T Consensus 32 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~f 110 (234)
T 3dtn_A 32 YGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEAT-FTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKY 110 (234)
T ss_dssp HHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCE
T ss_pred HHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCc
Confidence 345555554345678999999999999999999999888 999999 8888776543 4899999999886 4443
Q ss_pred cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhccc--------chH---hhhhccccCc
Q 025363 158 DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLE--------GDI---FVMTIYRAKG 226 (254)
Q Consensus 158 D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~--------~~~---~~~~~~~~~~ 226 (254)
|+|++..++|++++.+...+|++++++|||||++++.+...+......... ...+ +.. ..........
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLN-KTIWRQYVENSGLTEEEIAAGYERSKLD 189 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHH-HHHHHHHHHTSSCCHHHHHTTC----CC
T ss_pred eEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHH-HHHHHHHHHhcCCCHHHHHHHHHhcccc
Confidence 999999999999988888899999999999999999998765432100000 0000 000 0000001122
Q ss_pred eecCHHHHHHHHHhCCCCeeeEEE
Q 025363 227 NHRTEQEFKQLGFFAGFPHLRLYR 250 (254)
Q Consensus 227 ~~~t~~e~~~ll~~aGf~~~~~~~ 250 (254)
..++.+++.++|+++||+.+++..
T Consensus 190 ~~~~~~~~~~ll~~aGF~~v~~~~ 213 (234)
T 3dtn_A 190 KDIEMNQQLNWLKEAGFRDVSCIY 213 (234)
T ss_dssp CCCBHHHHHHHHHHTTCEEEEEEE
T ss_pred cccCHHHHHHHHHHcCCCceeeee
Confidence 346889999999999999988754
No 19
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.80 E-value=5.4e-19 Score=140.02 Aligned_cols=158 Identities=18% Similarity=0.126 Sum_probs=113.4
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--CCcEEEeCCCCCCCCC-c-cE
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFKSIPA-A-DA 159 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--~~i~~~~~d~~~~~p~-~-D~ 159 (254)
...+++.+....+..+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. .+++++.+|+.+..+. . |+
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~ 110 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL--ADR-VTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDA 110 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH--SSE-EEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc--CCe-EEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeE
Confidence 4445555544566789999999999999999998 557 999999 8888887653 6799999999887443 3 99
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCc-------eecCHH
Q 025363 160 IFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKG-------NHRTEQ 232 (254)
Q Consensus 160 v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~t~~ 232 (254)
|++..++|++++++...+|++++++|||||++++.+...+.......... ........ ....+ ...+.+
T Consensus 111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~ 186 (218)
T 3ou2_A 111 VFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDS--EPEVAVRR--TLQDGRSFRIVKVFRSPA 186 (218)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC--------------CEEEE--ECTTSCEEEEECCCCCHH
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhc--ccccceee--ecCCcchhhHhhcCCCHH
Confidence 99999999999888899999999999999999999876643211000000 00000000 01111 134899
Q ss_pred HHHHHHHhCCCCeeeEE
Q 025363 233 EFKQLGFFAGFPHLRLY 249 (254)
Q Consensus 233 e~~~ll~~aGf~~~~~~ 249 (254)
++.++++++||++....
T Consensus 187 ~~~~~l~~aGf~v~~~~ 203 (218)
T 3ou2_A 187 ELTERLTALGWSCSVDE 203 (218)
T ss_dssp HHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHCCCEEEeee
Confidence 99999999999955433
No 20
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.80 E-value=6.3e-19 Score=143.83 Aligned_cols=155 Identities=16% Similarity=0.236 Sum_probs=121.2
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCC-CCC-c
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA-A 157 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~-~p~-~ 157 (254)
.+.+++.++ ..++.+|||||||+|.++..+++++ +.+ ++++|+ +.+++.+++. ++++++.+|+.+. ++. .
T Consensus 44 ~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~-~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~ 120 (266)
T 3ujc_A 44 TKKILSDIE-LNENSKVLDIGSGLGGGCMYINEKY-GAH-THGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENN 120 (266)
T ss_dssp HHHHTTTCC-CCTTCEEEEETCTTSHHHHHHHHHH-CCE-EEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTC
T ss_pred HHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCc
Confidence 455667774 7788999999999999999999987 667 999999 8888777654 6899999999875 444 3
Q ss_pred -cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHH
Q 025363 158 -DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQ 236 (254)
Q Consensus 158 -D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 236 (254)
|+|++..++|++++++...+|++++++|||||++++.+...+.... .... .... .. ..+...++.+++.+
T Consensus 121 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~--~~~~---~~~~-~~---~~~~~~~~~~~~~~ 191 (266)
T 3ujc_A 121 FDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKEN--WDDE---FKEY-VK---QRKYTLITVEEYAD 191 (266)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGG--CCHH---HHHH-HH---HHTCCCCCHHHHHH
T ss_pred EEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCccc--chHH---HHHH-Hh---cCCCCCCCHHHHHH
Confidence 9999999999998888999999999999999999999987654211 0000 0000 00 11234568999999
Q ss_pred HHHhCCCCeeeEEEc
Q 025363 237 LGFFAGFPHLRLYRV 251 (254)
Q Consensus 237 ll~~aGf~~~~~~~~ 251 (254)
+++++||+++++..+
T Consensus 192 ~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 192 ILTACNFKNVVSKDL 206 (266)
T ss_dssp HHHHTTCEEEEEEEC
T ss_pred HHHHcCCeEEEEEeC
Confidence 999999999988765
No 21
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.80 E-value=9.1e-19 Score=141.12 Aligned_cols=151 Identities=14% Similarity=0.254 Sum_probs=114.9
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCC---CCCC--c
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK---SIPA--A 157 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~---~~p~--~ 157 (254)
..+.+...++..+++.+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. ++++.+|+.+ +++. .
T Consensus 28 ~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~-v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~f 102 (240)
T 3dli_A 28 VKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEE--GIE-SIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYL 102 (240)
T ss_dssp HHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHH--TCC-EEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCB
T ss_pred HHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC--CCc-EEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCe
Confidence 44445555544567789999999999999999988 557 999999 8898888764 9999999876 3443 3
Q ss_pred cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHH
Q 025363 158 DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQL 237 (254)
Q Consensus 158 D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 237 (254)
|+|++..++|++++++...+|++++++|||||++++........ .. ..... . .......++.+++.++
T Consensus 103 D~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~-----~~~~~-~--~~~~~~~~~~~~l~~~ 170 (240)
T 3dli_A 103 DGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL----YS-----LINFY-I--DPTHKKPVHPETLKFI 170 (240)
T ss_dssp SEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH----HH-----HHHHT-T--STTCCSCCCHHHHHHH
T ss_pred eEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh----HH-----HHHHh-c--CccccccCCHHHHHHH
Confidence 99999999999998888999999999999999999977642211 10 00110 0 0122345689999999
Q ss_pred HHhCCCCeeeEEEc
Q 025363 238 GFFAGFPHLRLYRV 251 (254)
Q Consensus 238 l~~aGf~~~~~~~~ 251 (254)
++++||+++++...
T Consensus 171 l~~aGf~~~~~~~~ 184 (240)
T 3dli_A 171 LEYLGFRDVKIEFF 184 (240)
T ss_dssp HHHHTCEEEEEEEE
T ss_pred HHHCCCeEEEEEEe
Confidence 99999999887654
No 22
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.79 E-value=2.9e-19 Score=141.96 Aligned_cols=161 Identities=16% Similarity=0.169 Sum_probs=113.2
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--CCcEEEeCCCCCC-CCC-ccEE
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFKS-IPA-ADAI 160 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--~~i~~~~~d~~~~-~p~-~D~v 160 (254)
..+++.+. ..++.+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. .+++++.+|+.+. .++ .|+|
T Consensus 35 ~~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v 110 (220)
T 3hnr_A 35 EDILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA--GRT-VYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTI 110 (220)
T ss_dssp HHHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT--TCE-EEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEE
T ss_pred HHHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC--CCe-EEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEE
Confidence 34555553 456889999999999999999988 557 999999 8888877654 3899999999886 444 3999
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHh
Q 025363 161 FMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFF 240 (254)
Q Consensus 161 ~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 240 (254)
++..++|++++.+...+|++++++|||||++++.+..................................+.++|.+++++
T Consensus 111 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 190 (220)
T 3hnr_A 111 VSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFEN 190 (220)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHH
T ss_pred EECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHH
Confidence 99999999998887789999999999999999998765432110000000000000000000000123488999999999
Q ss_pred CCCCeeeEEE
Q 025363 241 AGFPHLRLYR 250 (254)
Q Consensus 241 aGf~~~~~~~ 250 (254)
+||+++....
T Consensus 191 aGf~v~~~~~ 200 (220)
T 3hnr_A 191 NGFHVTFTRL 200 (220)
T ss_dssp TTEEEEEEEC
T ss_pred CCCEEEEeec
Confidence 9998776543
No 23
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.79 E-value=6e-19 Score=143.83 Aligned_cols=166 Identities=13% Similarity=0.164 Sum_probs=117.8
Q ss_pred HHHHHhcCCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEE
Q 025363 73 MRKAMSGVSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTH 145 (254)
Q Consensus 73 ~~~~m~~~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~ 145 (254)
|............+.+++.++ ..++.+|||||||+|.++..+++..+ + ++++|+ +.+++.+++. +++++
T Consensus 14 ~~~s~~~~~~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~-v~gvD~s~~~l~~a~~~~~~~~~~~v~~ 89 (260)
T 1vl5_A 14 YVTSQIHAKGSDLAKLMQIAA-LKGNEEVLDVATGGGHVANAFAPFVK--K-VVAFDLTEDILKVARAFIEGNGHQQVEY 89 (260)
T ss_dssp ---------CCCHHHHHHHHT-CCSCCEEEEETCTTCHHHHHHGGGSS--E-EEEEESCHHHHHHHHHHHHHTTCCSEEE
T ss_pred eecCccccCHHHHHHHHHHhC-CCCCCEEEEEeCCCCHHHHHHHHhCC--E-EEEEeCCHHHHHHHHHHHHhcCCCceEE
Confidence 444444444455667777774 67889999999999999999999875 6 999999 8888877643 57999
Q ss_pred EeCCCCCC-CCC-c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchH-hhhhc
Q 025363 146 IGGDMFKS-IPA-A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDI-FVMTI 221 (254)
Q Consensus 146 ~~~d~~~~-~p~-~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~~ 221 (254)
+.+|+.+. +++ . |+|++..++|++++. ..+|++++++|||||+|++.+...+.. +.... .+.. ....
T Consensus 90 ~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~~~~~~~~~~---~~~~~---~~~~~~~~~- 160 (260)
T 1vl5_A 90 VQGDAEQMPFTDERFHIVTCRIAAHHFPNP--ASFVSEAYRVLKKGGQLLLVDNSAPEN---DAFDV---FYNYVEKER- 160 (260)
T ss_dssp EECCC-CCCSCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEEEBCSS---HHHHH---HHHHHHHHH-
T ss_pred EEecHHhCCCCCCCEEEEEEhhhhHhcCCH--HHHHHHHHHHcCCCCEEEEEEcCCCCC---HHHHH---HHHHHHHhc-
Confidence 99999875 554 3 999999999999754 689999999999999999998776543 11111 1111 1111
Q ss_pred cccCceecCHHHHHHHHHhCCCCeeeEEEc
Q 025363 222 YRAKGNHRTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 222 ~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
.......++.++|.++|+++||+++.+...
T Consensus 161 ~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 161 DYSHHRAWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp CTTCCCCCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred CccccCCCCHHHHHHHHHHCCCeEEEEEEe
Confidence 011234578999999999999998876643
No 24
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.78 E-value=9e-19 Score=142.08 Aligned_cols=151 Identities=19% Similarity=0.254 Sum_probs=117.9
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCC-CCC-c
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA-A 157 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~-~p~-~ 157 (254)
...+++.++ ..+..+|||||||+|.++..+++.. ..+ ++++|. +.+++.+++. .+++++.+|+.+. ++. .
T Consensus 82 ~~~~l~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~-~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (254)
T 1xtp_A 82 SRNFIASLP-GHGTSRALDCGAGIGRITKNLLTKL-YAT-TDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNT 158 (254)
T ss_dssp HHHHHHTST-TCCCSEEEEETCTTTHHHHHTHHHH-CSE-EEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSC
T ss_pred HHHHHHhhc-ccCCCEEEEECCCcCHHHHHHHHhh-cCE-EEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCC
Confidence 345666663 6678899999999999999999886 446 899998 8888776643 5799999999775 443 3
Q ss_pred -cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHH
Q 025363 158 -DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQ 236 (254)
Q Consensus 158 -D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 236 (254)
|+|++.+++|++++++...+|++++++|||||+|++.+....... ...+. ......++.++|.+
T Consensus 159 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---------~~~~~------~~~~~~~~~~~~~~ 223 (254)
T 1xtp_A 159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDR---------FLVDK------EDSSLTRSDIHYKR 223 (254)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CC---------EEEET------TTTEEEBCHHHHHH
T ss_pred eEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCccc---------ceecc------cCCcccCCHHHHHH
Confidence 999999999999988899999999999999999999987543221 01110 11234579999999
Q ss_pred HHHhCCCCeeeEEEccC
Q 025363 237 LGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 237 ll~~aGf~~~~~~~~~~ 253 (254)
+++++||+++++....+
T Consensus 224 ~l~~aGf~~~~~~~~~~ 240 (254)
T 1xtp_A 224 LFNESGVRVVKEAFQEE 240 (254)
T ss_dssp HHHHHTCCEEEEEECTT
T ss_pred HHHHCCCEEEEeeecCC
Confidence 99999999998876543
No 25
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.78 E-value=2e-18 Score=144.56 Aligned_cols=162 Identities=10% Similarity=0.019 Sum_probs=121.2
Q ss_pred HhcCCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeC
Q 025363 77 MSGVSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGG 148 (254)
Q Consensus 77 m~~~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~ 148 (254)
+........+.+++.++...++.+|||||||+|.++..+++++ +.+ ++++|+ +.+++.+++. ++++++.+
T Consensus 97 ~~~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 174 (312)
T 3vc1_A 97 LHRLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSR-VEGVTLSAAQADFGNRRARELRIDDHVRSRVC 174 (312)
T ss_dssp HHHHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred hhhHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 3333334456677777437788999999999999999999986 567 999999 8888877653 47999999
Q ss_pred CCCCC-CCC-c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccC
Q 025363 149 DMFKS-IPA-A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAK 225 (254)
Q Consensus 149 d~~~~-~p~-~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (254)
|+.+. ++. . |+|++..++|+++ ...+|++++++|||||++++.+............ ........ ..
T Consensus 175 d~~~~~~~~~~fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-----~~~~~~~~---~~ 243 (312)
T 3vc1_A 175 NMLDTPFDKGAVTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSK-----WVSQINAH---FE 243 (312)
T ss_dssp CTTSCCCCTTCEEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCH-----HHHHHHHH---HT
T ss_pred ChhcCCCCCCCEeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchhH-----HHHHHHhh---hc
Confidence 99875 443 3 9999999999984 6799999999999999999998776653211100 01111000 01
Q ss_pred ceecCHHHHHHHHHhCCCCeeeEEEc
Q 025363 226 GNHRTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 226 ~~~~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
...++.++|.++++++||+++++..+
T Consensus 244 ~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 244 CNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp CCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 13568999999999999999988765
No 26
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.77 E-value=1.8e-18 Score=141.83 Aligned_cols=157 Identities=15% Similarity=0.111 Sum_probs=119.5
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC-C
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-I 154 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~-~ 154 (254)
..+.+++.++ ..++.+|||||||+|.++..+++.+ +.+ ++++|+ +.+++.+++. ++++++.+|+.+. +
T Consensus 49 ~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 125 (273)
T 3bus_A 49 LTDEMIALLD-VRSGDRVLDVGCGIGKPAVRLATAR-DVR-VTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF 125 (273)
T ss_dssp HHHHHHHHSC-CCTTCEEEEESCTTSHHHHHHHHHS-CCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS
T ss_pred HHHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhc-CCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC
Confidence 3456777774 7788999999999999999999987 567 999999 8887776542 4799999999875 5
Q ss_pred CC-c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHH
Q 025363 155 PA-A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQ 232 (254)
Q Consensus 155 p~-~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 232 (254)
+. . |+|++..++|++++. ..+|++++++|||||++++.+............ ...+..... ......++.+
T Consensus 126 ~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~ 197 (273)
T 3bus_A 126 EDASFDAVWALESLHHMPDR--GRALREMARVLRPGGTVAIADFVLLAPVEGAKK----EAVDAFRAG--GGVLSLGGID 197 (273)
T ss_dssp CTTCEEEEEEESCTTTSSCH--HHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHH----HHHHHHHHH--HTCCCCCCHH
T ss_pred CCCCccEEEEechhhhCCCH--HHHHHHHHHHcCCCeEEEEEEeeccCCCChhHH----HHHHHHHhh--cCccCCCCHH
Confidence 44 3 999999999999654 689999999999999999999876543211110 011111111 2234567999
Q ss_pred HHHHHHHhCCCCeeeEEEc
Q 025363 233 EFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 233 e~~~ll~~aGf~~~~~~~~ 251 (254)
++.++++++||+++++..+
T Consensus 198 ~~~~~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 198 EYESDVRQAELVVTSTVDI 216 (273)
T ss_dssp HHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHcCCeEEEEEEC
Confidence 9999999999999988765
No 27
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.77 E-value=2.6e-18 Score=139.61 Aligned_cols=153 Identities=16% Similarity=0.088 Sum_probs=115.8
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP 155 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p 155 (254)
..+.+++.++ ..++.+|||||||+|..+..+++.+ +.+ ++++|+ +.+++.+++. ++++++.+|+.+..+
T Consensus 24 ~~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~-~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 100 (256)
T 1nkv_A 24 KYATLGRVLR-MKPGTRILDLGSGSGEMLCTWARDH-GIT-GTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA 100 (256)
T ss_dssp HHHHHHHHTC-CCTTCEEEEETCTTCHHHHHHHHHT-CCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC
T ss_pred HHHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc-CCe-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc
Confidence 3455666663 7788999999999999999999987 567 999999 8888877543 479999999987633
Q ss_pred -Cc-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHH
Q 025363 156 -AA-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQE 233 (254)
Q Consensus 156 -~~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 233 (254)
+. |+|++..++|++++ ..++|++++++|||||+|++.+.............. .. .. ......++.++
T Consensus 101 ~~~fD~V~~~~~~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~--~~-----~~--~~~~~~~~~~~ 169 (256)
T 1nkv_A 101 NEKCDVAACVGATWIAGG--FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQ--AC-----GV--SSTSDFLTLPG 169 (256)
T ss_dssp SSCEEEEEEESCGGGTSS--SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHH--TT-----TC--SCGGGSCCHHH
T ss_pred CCCCCEEEECCChHhcCC--HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHH--HH-----hc--ccccccCCHHH
Confidence 33 99999999999864 478999999999999999999987654422111100 00 00 11123468999
Q ss_pred HHHHHHhCCCCeeeEEE
Q 025363 234 FKQLGFFAGFPHLRLYR 250 (254)
Q Consensus 234 ~~~ll~~aGf~~~~~~~ 250 (254)
|.++++++||+++++..
T Consensus 170 ~~~~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 170 LVGAFDDLGYDVVEMVL 186 (256)
T ss_dssp HHHHHHTTTBCCCEEEE
T ss_pred HHHHHHHCCCeeEEEEe
Confidence 99999999999887654
No 28
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.77 E-value=2.7e-18 Score=141.94 Aligned_cols=162 Identities=12% Similarity=0.085 Sum_probs=119.6
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCCC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA 156 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p~ 156 (254)
.+.+++.++ ..++.+|||||||+|.++..+++.++ .+ ++++|+ +.+++.+++. ++++++.+|+.+ +|+
T Consensus 53 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~-~~-v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~ 128 (287)
T 1kpg_A 53 IDLALGKLG-LQPGMTLLDVGCGWGATMMRAVEKYD-VN-VVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ-FDE 128 (287)
T ss_dssp HHHHHTTTT-CCTTCEEEEETCTTSHHHHHHHHHHC-CE-EEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG-CCC
T ss_pred HHHHHHHcC-CCCcCEEEEECCcccHHHHHHHHHcC-CE-EEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh-CCC
Confidence 455667664 77889999999999999999997774 47 999999 8888776542 589999999854 444
Q ss_pred -ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCC-----ChhhhhhcccchHhhhhccccCceecC
Q 025363 157 -ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSN-----ESQRTRALLEGDIFVMTIYRAKGNHRT 230 (254)
Q Consensus 157 -~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~t 230 (254)
.|+|++..++|++++++...+|++++++|||||++++.+...+.... .+.........+..... ..+++...+
T Consensus 129 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s 207 (287)
T 1kpg_A 129 PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTE-IFPGGRLPS 207 (287)
T ss_dssp CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHH-TSTTCCCCC
T ss_pred CeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHhe-eCCCCCCCC
Confidence 39999999999998777789999999999999999999887653210 00000000011111111 123456679
Q ss_pred HHHHHHHHHhCCCCeeeEEEc
Q 025363 231 EQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 231 ~~e~~~ll~~aGf~~~~~~~~ 251 (254)
.+++.++++++||+++++..+
T Consensus 208 ~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 208 IPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp HHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHHhCCcEEEEEEeC
Confidence 999999999999999998765
No 29
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.77 E-value=4.8e-18 Score=141.54 Aligned_cols=161 Identities=15% Similarity=0.166 Sum_probs=122.1
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCCC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA 156 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p~ 156 (254)
.+.+++.++ ..++.+|||||||+|.++..+++.++ .+ ++++|+ +.+++.+++. .+++++.+|+.+. ++
T Consensus 61 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~-~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~ 136 (302)
T 3hem_A 61 RKLALDKLN-LEPGMTLLDIGCGWGSTMRHAVAEYD-VN-VIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-DE 136 (302)
T ss_dssp HHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHC-CE-EEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-CC
T ss_pred HHHHHHHcC-CCCcCEEEEeeccCcHHHHHHHHhCC-CE-EEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-CC
Confidence 455677774 78889999999999999999999986 67 999999 8888877653 3799999999765 44
Q ss_pred -ccEEEeccccccCCH-------HHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhc-------ccchHhhhhc
Q 025363 157 -ADAIFMKWVLTTWTD-------DECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRAL-------LEGDIFVMTI 221 (254)
Q Consensus 157 -~D~v~~~~vlh~~~~-------~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 221 (254)
.|+|++..++|++++ +....++++++++|||||++++.+...+.... ...... ...+.....
T Consensus 137 ~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~- 213 (302)
T 3hem_A 137 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEE--AQELGLTSPMSLLRFIKFILTE- 213 (302)
T ss_dssp CCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHH--HHHHTCCCCHHHHHHHHHHHHH-
T ss_pred CccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccc--hhhccccccccccchHHHHHHh-
Confidence 399999999999943 66789999999999999999999887654310 000000 000111111
Q ss_pred cccCceecCHHHHHHHHHhCCCCeeeEEEcc
Q 025363 222 YRAKGNHRTEQEFKQLGFFAGFPHLRLYRVL 252 (254)
Q Consensus 222 ~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 252 (254)
..+++...+.+++.++++++||+++++..+.
T Consensus 214 ~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 214 IFPGGRLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp TCTTCCCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred cCCCCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 1345667899999999999999999887653
No 30
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.77 E-value=1.2e-18 Score=140.43 Aligned_cols=141 Identities=16% Similarity=0.197 Sum_probs=112.7
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC-CCC--ccEEEeccc
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IPA--ADAIFMKWV 165 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~-~p~--~D~v~~~~v 165 (254)
.+..+|||||||+|.++..+++.. ..+ ++++|+ +.+++.+++. .+++++.+|+.+. .+. .|+|++..+
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 155 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL-FRE-VDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWV 155 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT-CSE-EEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCE-EEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcch
Confidence 357899999999999999999886 446 999999 8888877643 2588999998765 443 399999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCCe
Q 025363 166 LTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPH 245 (254)
Q Consensus 166 lh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 245 (254)
+|++++++...+|++++++|||||+|++.+...... ..++. ......++.++|.++++++||++
T Consensus 156 l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----------~~~~~------~~~~~~~~~~~~~~~l~~aGf~~ 219 (241)
T 2ex4_A 156 IGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEG----------VILDD------VDSSVCRDLDVVRRIICSAGLSL 219 (241)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSS----------EEEET------TTTEEEEBHHHHHHHHHHTTCCE
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCc----------ceecc------cCCcccCCHHHHHHHHHHcCCeE
Confidence 999998888899999999999999999998876531 01110 11234468999999999999999
Q ss_pred eeEEEccCC
Q 025363 246 LRLYRVLDY 254 (254)
Q Consensus 246 ~~~~~~~~~ 254 (254)
+++....++
T Consensus 220 ~~~~~~~~~ 228 (241)
T 2ex4_A 220 LAEERQENL 228 (241)
T ss_dssp EEEEECCSC
T ss_pred EEeeecCCC
Confidence 998876553
No 31
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.77 E-value=1.5e-18 Score=144.19 Aligned_cols=154 Identities=14% Similarity=0.180 Sum_probs=116.3
Q ss_pred HHHHHhhc---CCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC
Q 025363 85 MTSVLEGY---NGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS 153 (254)
Q Consensus 85 ~~~i~~~~---~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~ 153 (254)
.+.+++.+ ....++.+|||||||+|.++..+++.+ +.+ ++++|+ +.+++.+++. ++++++.+|+.+.
T Consensus 67 ~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 67 DEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVS-IDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI 144 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCE-EEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC
T ss_pred HHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC
Confidence 34455555 126778899999999999999999987 457 999999 8888776542 5799999999875
Q ss_pred -CCC-c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecC
Q 025363 154 -IPA-A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRT 230 (254)
Q Consensus 154 -~p~-~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 230 (254)
++. . |+|++..++|++++ ...+|++++++|||||+|++.+........... ...+.... ......+
T Consensus 145 ~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~------~~~~~~~~---~~~~~~~ 213 (297)
T 2o57_A 145 PCEDNSYDFIWSQDAFLHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSS------IQPILDRI---KLHDMGS 213 (297)
T ss_dssp SSCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGG------GHHHHHHH---TCSSCCC
T ss_pred CCCCCCEeEEEecchhhhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHH------HHHHHHHh---cCCCCCC
Confidence 444 3 99999999999976 579999999999999999999987654322110 00111110 1123458
Q ss_pred HHHHHHHHHhCCCCeeeEEEc
Q 025363 231 EQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 231 ~~e~~~ll~~aGf~~~~~~~~ 251 (254)
.+++.++++++||+++++..+
T Consensus 214 ~~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 214 LGLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp HHHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHHCCCeEEEEEEC
Confidence 999999999999999988765
No 32
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.77 E-value=2.2e-18 Score=136.81 Aligned_cols=146 Identities=19% Similarity=0.121 Sum_probs=117.2
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC-CC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IP 155 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~-~p 155 (254)
...+++.++ ..++.+|||||||+|.++..+++.. |..+ ++++|. +.+++.+++. ++++++.+|+.+. ++
T Consensus 26 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 26 PEKVLKEFG-LKEGMTVLDVGTGAGFYLPYLSKMVGEKGK-VYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHHHHHT-CCTTCEEEESSCTTCTTHHHHHHHHTTTCE-EEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSC
T ss_pred HHHHHHHhC-CCCCCEEEEEecCCCHHHHHHHHHhCCCcE-EEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCC
Confidence 355666664 7788899999999999999999997 6778 999999 8888877653 5799999999875 44
Q ss_pred Cc--cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHH
Q 025363 156 AA--DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQE 233 (254)
Q Consensus 156 ~~--D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 233 (254)
.. |+|++..++|++++ ...+|++++++|+|||++++.+.........+ .....++.++
T Consensus 104 ~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~------------------~~~~~~~~~~ 163 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSE--PLKFLEELKRVAKPFAYLAIIDWKKEERDKGP------------------PPEEVYSEWE 163 (219)
T ss_dssp SSCEEEEEEESCGGGCSS--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSC------------------CGGGSCCHHH
T ss_pred CCCeeEEEeehhhhhcCC--HHHHHHHHHHHhCCCeEEEEEEecccccccCC------------------chhcccCHHH
Confidence 43 99999999999964 47899999999999999999987655431110 0112368899
Q ss_pred HHHHHHhCCCCeeeEEEcc
Q 025363 234 FKQLGFFAGFPHLRLYRVL 252 (254)
Q Consensus 234 ~~~ll~~aGf~~~~~~~~~ 252 (254)
+.++++++||+++++..+.
T Consensus 164 ~~~~l~~~Gf~~~~~~~~~ 182 (219)
T 3dh0_A 164 VGLILEDAGIRVGRVVEVG 182 (219)
T ss_dssp HHHHHHHTTCEEEEEEEET
T ss_pred HHHHHHHCCCEEEEEEeeC
Confidence 9999999999999887654
No 33
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.77 E-value=1e-18 Score=137.12 Aligned_cols=137 Identities=17% Similarity=0.023 Sum_probs=110.8
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCC-CCC-c-cEEEeccccccCCHH
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPA-A-DAIFMKWVLTTWTDD 172 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~-~p~-~-D~v~~~~vlh~~~~~ 172 (254)
+.+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. ++++++.+|+.+. .+. . |+|++..++|+++.+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQ-IEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPG 118 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCC-EEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCe-EEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHH
Confidence 679999999999999999988 457 999999 8888887764 7899999999875 443 3 999999999999877
Q ss_pred HHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCCeeeEEEcc
Q 025363 173 ECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHLRLYRVL 252 (254)
Q Consensus 173 ~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 252 (254)
+...+|++++++|||||++++.+...+... .+.- .......++.++|.++++++||+++++....
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~----------~~~~-----~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSGPSLE----------PMYH-----PVATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECCSSCE----------EECC-----SSSCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccCCchh----------hhhc-----hhhhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 889999999999999999999876543310 0000 0112345799999999999999999987654
No 34
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.76 E-value=8.3e-19 Score=144.18 Aligned_cols=152 Identities=17% Similarity=0.215 Sum_probs=113.3
Q ss_pred CCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC-CCC-c-cEEEec
Q 025363 94 GFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IPA-A-DAIFMK 163 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~-~p~-~-D~v~~~ 163 (254)
...++.+|||||||+|.++..+++.+|+.+ ++++|+ +.+++.+++. ++++++.+|+.+. ++. . |+|++.
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 112 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNNPDAE-ITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVC 112 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEE
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEe
Confidence 467889999999999999999999999888 999999 8888877543 5799999999875 443 3 999999
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCC---CCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHh
Q 025363 164 WVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD---SNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFF 240 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 240 (254)
.++|++++. ..+|++++++|||||++++.+...... +..+..... ...+.... ...++..++..++.++|++
T Consensus 113 ~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~l~~~l~~ 187 (276)
T 3mgg_A 113 FVLEHLQSP--EEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEA--WNCLIRVQ-AYMKGNSLVGRQIYPLLQE 187 (276)
T ss_dssp SCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHH--HHHHHHHH-HHTTCCTTGGGGHHHHHHH
T ss_pred chhhhcCCH--HHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHH--HHHHHHHH-HhcCCCcchHHHHHHHHHH
Confidence 999999765 489999999999999999988644221 111111110 00010010 1223445677899999999
Q ss_pred CCCCeeeEEEc
Q 025363 241 AGFPHLRLYRV 251 (254)
Q Consensus 241 aGf~~~~~~~~ 251 (254)
+||+++++...
T Consensus 188 aGf~~v~~~~~ 198 (276)
T 3mgg_A 188 SGFEKIRVEPR 198 (276)
T ss_dssp TTCEEEEEEEE
T ss_pred CCCCeEEEeeE
Confidence 99999988754
No 35
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.75 E-value=1.1e-17 Score=140.34 Aligned_cols=163 Identities=14% Similarity=0.155 Sum_probs=120.8
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP 155 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p 155 (254)
..+.+++.++ ..++.+|||||||+|.++..+++.+ +.+ ++++|+ +.+++.+++. ++++++.+|+.+. |
T Consensus 78 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~-~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~ 153 (318)
T 2fk8_A 78 KVDLNLDKLD-LKPGMTLLDIGCGWGTTMRRAVERF-DVN-VIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-A 153 (318)
T ss_dssp HHHHHHTTSC-CCTTCEEEEESCTTSHHHHHHHHHH-CCE-EEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-C
T ss_pred HHHHHHHhcC-CCCcCEEEEEcccchHHHHHHHHHC-CCE-EEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC-C
Confidence 3456677774 7788999999999999999999987 557 999999 8888776643 4699999998543 4
Q ss_pred C-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCC----hhhh-hhcccchHhhhhccccCceec
Q 025363 156 A-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNE----SQRT-RALLEGDIFVMTIYRAKGNHR 229 (254)
Q Consensus 156 ~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~ 229 (254)
+ .|+|++..++|++++++...+|++++++|||||++++.+...+..... .+.. ......+..... ..+++..+
T Consensus 154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 232 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTE-IFPGGRLP 232 (318)
T ss_dssp CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHH-TSTTCCCC
T ss_pred CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHh-cCCCCcCC
Confidence 4 499999999999987788899999999999999999998876542100 0000 000001111111 12345667
Q ss_pred CHHHHHHHHHhCCCCeeeEEEc
Q 025363 230 TEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 230 t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
+.+++.++++++||+++++..+
T Consensus 233 s~~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 233 STEMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp CHHHHHHHHHHTTCBCCCCEEC
T ss_pred CHHHHHHHHHhCCCEEEEEEec
Confidence 9999999999999999887764
No 36
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.75 E-value=8.2e-19 Score=138.88 Aligned_cols=159 Identities=14% Similarity=0.179 Sum_probs=112.5
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC-CC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IP 155 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~-~p 155 (254)
.+.+++.++ .++. +|||||||+|.++..++++ ++.+ ++++|+ +.+++.+++. ++++++.+|+.+. ++
T Consensus 33 ~~~~~~~~~-~~~~-~vLdiG~G~G~~~~~l~~~-~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 33 AENIINRFG-ITAG-TCIDIGSGPGALSIALAKQ-SDFS-IRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHC-CCEE-EEEEETCTTSHHHHHHHHH-SEEE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred HHHHHHhcC-CCCC-EEEEECCCCCHHHHHHHHc-CCCe-EEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 455666663 5555 9999999999999999998 7778 999999 8888777653 4799999999885 55
Q ss_pred C-c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhc-ccchHhhhhccccCceecCHH
Q 025363 156 A-A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRAL-LEGDIFVMTIYRAKGNHRTEQ 232 (254)
Q Consensus 156 ~-~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~t~~ 232 (254)
. . |+|++..++|++++ ...+|++++++|||||++++.+...+............ ......... ......++.+
T Consensus 109 ~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 184 (219)
T 3dlc_A 109 DNYADLIVSRGSVFFWED--VATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFN--RKNISQENVE 184 (219)
T ss_dssp TTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHH--HHHSSHHHHH
T ss_pred cccccEEEECchHhhccC--HHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhh--hhccccCCHH
Confidence 4 3 99999999999954 46899999999999999999875443210000000000 000000000 0112335789
Q ss_pred HHHHHHHhCCCCeeeEEEc
Q 025363 233 EFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 233 e~~~ll~~aGf~~~~~~~~ 251 (254)
+|.++|+++||+.+++...
T Consensus 185 ~~~~~l~~aGf~~v~~~~~ 203 (219)
T 3dlc_A 185 RFQNVLDEIGISSYEIILG 203 (219)
T ss_dssp HHHHHHHHHTCSSEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEec
Confidence 9999999999999887754
No 37
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.75 E-value=6.3e-18 Score=137.36 Aligned_cols=153 Identities=14% Similarity=0.102 Sum_probs=114.9
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC-CC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IP 155 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~-~p 155 (254)
...+++.+....++.+|||||||+|.++..+++.++. + ++++|+ +.+++.+++. ++++++.+|+.+. ++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKG-Q-ITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQ 111 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS-E-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSC
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-e-EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCC
Confidence 3445555534667889999999999999999999875 7 999999 8888776543 4699999999664 44
Q ss_pred C-c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHH
Q 025363 156 A-A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQE 233 (254)
Q Consensus 156 ~-~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 233 (254)
. . |+|++..++|+++ ..++|++++++|||||++++.+............ ....... .....+.++
T Consensus 112 ~~~fD~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~------~~~~~~~----~~~~~~~~~ 178 (257)
T 3f4k_A 112 NEELDLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEI------EDFWMDA----YPEISVIPT 178 (257)
T ss_dssp TTCEEEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHH------HHHHHHH----CTTCCBHHH
T ss_pred CCCEEEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHH------HHHHHHh----CCCCCCHHH
Confidence 3 3 9999999999983 4689999999999999999999765433221111 1111111 122468999
Q ss_pred HHHHHHhCCCCeeeEEEcc
Q 025363 234 FKQLGFFAGFPHLRLYRVL 252 (254)
Q Consensus 234 ~~~ll~~aGf~~~~~~~~~ 252 (254)
+.++++++||++++...++
T Consensus 179 ~~~~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 179 CIDKMERAGYTPTAHFILP 197 (257)
T ss_dssp HHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHCCCeEEEEEECC
Confidence 9999999999999887654
No 38
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.75 E-value=5.6e-19 Score=140.87 Aligned_cols=107 Identities=15% Similarity=0.166 Sum_probs=88.5
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC-CCC-
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA- 156 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~-~p~- 156 (254)
.+.+.+.+ .+..+|||||||+|.++..+++..+ + ++++|+ +.+++.+++. .+++++.+|+.+. ++.
T Consensus 29 ~~~l~~~~---~~~~~vLDlG~G~G~~~~~l~~~~~--~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 102 (227)
T 1ve3_A 29 EPLLMKYM---KKRGKVLDLACGVGGFSFLLEDYGF--E-VVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDK 102 (227)
T ss_dssp HHHHHHSC---CSCCEEEEETCTTSHHHHHHHHTTC--E-EEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTT
T ss_pred HHHHHHhc---CCCCeEEEEeccCCHHHHHHHHcCC--E-EEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCC
Confidence 34444433 3478999999999999999999876 6 999999 8888877653 6799999999875 443
Q ss_pred -ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 157 -ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 157 -~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
.|+|++..++|.+...+..+++++++++|+|||++++.+..
T Consensus 103 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 103 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 39999999977777788899999999999999999998765
No 39
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.75 E-value=5.3e-18 Score=136.62 Aligned_cols=156 Identities=14% Similarity=0.197 Sum_probs=115.8
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC-CC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IP 155 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~-~p 155 (254)
....+++.++ ..++.+|||||||+|.++..+++..+ + ++++|+ +.+++.+++. ++++++.+|+.+. ++
T Consensus 9 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 84 (239)
T 1xxl_A 9 SLGLMIKTAE-CRAEHRVLDIGAGAGHTALAFSPYVQ--E-CIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFP 84 (239)
T ss_dssp HHHHHHHHHT-CCTTCEEEEESCTTSHHHHHHGGGSS--E-EEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSC
T ss_pred CcchHHHHhC-cCCCCEEEEEccCcCHHHHHHHHhCC--E-EEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCC
Confidence 3445666664 78889999999999999999998865 5 999999 8888776643 5799999999765 44
Q ss_pred C-c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHH
Q 025363 156 A-A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQE 233 (254)
Q Consensus 156 ~-~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 233 (254)
. . |+|++..++|++++ ...+|++++++|||||++++.+...+.. +........ +.... .......++.++
T Consensus 85 ~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~~~~~~~~~--~~~~~-~~~~~~~~~~~~ 156 (239)
T 1xxl_A 85 DDSFDIITCRYAAHHFSD--VRKAVREVARVLKQDGRFLLVDHYAPED---PVLDEFVNH--LNRLR-DPSHVRESSLSE 156 (239)
T ss_dssp TTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECBCSS---HHHHHHHHH--HHHHH-CTTCCCCCBHHH
T ss_pred CCcEEEEEECCchhhccC--HHHHHHHHHHHcCCCcEEEEEEcCCCCC---hhHHHHHHH--HHHhc-cccccCCCCHHH
Confidence 3 3 99999999999965 4689999999999999999998876543 111110000 11111 011234578999
Q ss_pred HHHHHHhCCCCeeeEEEc
Q 025363 234 FKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 234 ~~~ll~~aGf~~~~~~~~ 251 (254)
|.++|+++||+++++...
T Consensus 157 ~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 157 WQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp HHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHCCCcEEEEEee
Confidence 999999999998876653
No 40
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.75 E-value=4e-18 Score=134.64 Aligned_cols=139 Identities=19% Similarity=0.132 Sum_probs=109.3
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCC-Cc-cEEEeccccccCCH
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIP-AA-DAIFMKWVLTTWTD 171 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p-~~-D~v~~~~vlh~~~~ 171 (254)
..++.+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++..++.+..+|+.+..+ +. |+|++..++|++++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 117 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFD-VDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPR 117 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCe-EEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCH
Confidence 456789999999999999999988 457 999999 8888887765578888899876533 33 99999999999998
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCC-CCeeeEEE
Q 025363 172 DECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAG-FPHLRLYR 250 (254)
Q Consensus 172 ~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG-f~~~~~~~ 250 (254)
++...+|++++++|||||++++.......... +. . ...-..++.++|.++++++| |+++++..
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-----------~~--~---~~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGR-----------DK--L---ARYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEE-----------CT--T---SCEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccc-----------cc--c---chhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 88899999999999999999997543322100 00 0 00112368999999999999 99998876
Q ss_pred cc
Q 025363 251 VL 252 (254)
Q Consensus 251 ~~ 252 (254)
..
T Consensus 182 ~~ 183 (211)
T 3e23_A 182 SE 183 (211)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 41
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.75 E-value=6.2e-18 Score=138.36 Aligned_cols=153 Identities=15% Similarity=0.079 Sum_probs=115.4
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC-CC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IP 155 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~-~p 155 (254)
...+++.++...++.+|||||||+|.++..+++. +..+ ++++|+ +.+++.+++. ++++++.+|+.+. ++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 111 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQ-VTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFR 111 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCE-EEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCC
Confidence 3344555533667899999999999999999998 7778 999999 8888776643 5699999999775 44
Q ss_pred C-c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHH
Q 025363 156 A-A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQE 233 (254)
Q Consensus 156 ~-~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 233 (254)
. . |+|++..++|+++ ...+|++++++|||||++++.+............ ....... .....+.++
T Consensus 112 ~~~fD~i~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~------~~~~~~~----~~~~~~~~~ 178 (267)
T 3kkz_A 112 NEELDLIWSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEI------NDFWMDA----YPEIDTIPN 178 (267)
T ss_dssp TTCEEEEEESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHH------HHHHHHH----CTTCEEHHH
T ss_pred CCCEEEEEEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHH------HHHHHHh----CCCCCCHHH
Confidence 3 3 9999999999983 3689999999999999999999875433221110 1111000 123358899
Q ss_pred HHHHHHhCCCCeeeEEEcc
Q 025363 234 FKQLGFFAGFPHLRLYRVL 252 (254)
Q Consensus 234 ~~~ll~~aGf~~~~~~~~~ 252 (254)
+.++++++||+++++..++
T Consensus 179 ~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 179 QVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp HHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHCCCEEEEEEECC
Confidence 9999999999999988764
No 42
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.74 E-value=4.1e-18 Score=139.08 Aligned_cols=102 Identities=18% Similarity=0.203 Sum_probs=85.5
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCC-CCCc-cEEEecc-ccccCC
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPAA-DAIFMKW-VLTTWT 170 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~-~p~~-D~v~~~~-vlh~~~ 170 (254)
.+..+|||||||+|.++..+++..+ + ++++|+ +.+++.+++. ++++++.+|+.+. .++. |+|++.. ++|+++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~--~-v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFG--T-VEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSS--E-EEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCC--e-EEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcC
Confidence 4568999999999999999998853 6 999999 8888887654 6899999999886 4443 9999998 999986
Q ss_pred H-HHHHHHHHHHHHhCCCCCEEEEEccccCC
Q 025363 171 D-DECKLIMENCYKALPAGGKLIACEPVLPD 200 (254)
Q Consensus 171 ~-~~~~~il~~~~~~L~pgG~l~i~d~~~~~ 200 (254)
+ ++...+|++++++|||||+|++.+...++
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 156 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEPWWFPE 156 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEeccChh
Confidence 4 57789999999999999999997654443
No 43
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.74 E-value=1.1e-17 Score=137.45 Aligned_cols=141 Identities=17% Similarity=0.210 Sum_probs=108.4
Q ss_pred CCCCeEEEecCcc---cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCC------------CC
Q 025363 96 KGVKRLVDVGGSA---GDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS------------IP 155 (254)
Q Consensus 96 ~~~~~vlDvG~G~---G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~------------~p 155 (254)
.+..+|||||||+ |.++..+.+.+|+.+ ++++|+ |.|++.+++. ++++++.+|+.+. ++
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~-v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDAR-VVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTCE-EEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCCE-EEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCC
Confidence 3457999999999 999888888889989 999999 9998877643 6899999999763 22
Q ss_pred --CccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHH
Q 025363 156 --AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQE 233 (254)
Q Consensus 156 --~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 233 (254)
..|+|++..+||++++++...+|++++++|+|||+|++.+..... . .... ...+..... ......++.+|
T Consensus 155 ~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~-~--~~~~---~~~~~~~~~--~~~~~~~s~~e 226 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG-L--PAQQ---KLARITREN--LGEGWARTPEE 226 (274)
T ss_dssp TTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS-C--HHHH---HHHHHHHHH--HSCCCCBCHHH
T ss_pred CCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc-h--HHHH---HHHHHHHhc--CCCCccCCHHH
Confidence 249999999999999878899999999999999999999976532 1 1111 111221111 12345689999
Q ss_pred HHHHHHhCCCCeee
Q 025363 234 FKQLGFFAGFPHLR 247 (254)
Q Consensus 234 ~~~ll~~aGf~~~~ 247 (254)
+.++| +||++++
T Consensus 227 i~~~l--~G~~l~~ 238 (274)
T 2qe6_A 227 IERQF--GDFELVE 238 (274)
T ss_dssp HHHTT--TTCEECT
T ss_pred HHHHh--CCCeEcc
Confidence 99999 5998765
No 44
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.74 E-value=3e-17 Score=132.07 Aligned_cols=142 Identities=16% Similarity=0.107 Sum_probs=108.6
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---CCcEEEeCCCCCC-CCC-c-cEEEecccccc
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---PGVTHIGGDMFKS-IPA-A-DAIFMKWVLTT 168 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---~~i~~~~~d~~~~-~p~-~-D~v~~~~vlh~ 168 (254)
+++.+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. .+++++.+|+.+. ++. . |+|++.+++|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYK-AVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCe-EEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhh
Confidence 46789999999999999999998 557 999999 8888887664 6899999999875 444 3 99999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCCeeeE
Q 025363 169 WTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHLRL 248 (254)
Q Consensus 169 ~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 248 (254)
+++. ..+|++++++|+|||++++.+........ .. .+...... ......++.+++.++++++||++++.
T Consensus 129 ~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~---~~----~~~~~~~~--~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 129 TEEP--LRALNEIKRVLKSDGYACIAILGPTAKPR---EN----SYPRLYGK--DVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp SSCH--HHHHHHHHHHEEEEEEEEEEEECTTCGGG---GG----GGGGGGTC--CCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred ccCH--HHHHHHHHHHhCCCeEEEEEEcCCcchhh---hh----hhhhhccc--cccccCCCHHHHHHHHHHcCCEEEEe
Confidence 8644 68999999999999999998864432211 00 00100000 11234478999999999999999988
Q ss_pred EEc
Q 025363 249 YRV 251 (254)
Q Consensus 249 ~~~ 251 (254)
..+
T Consensus 198 ~~~ 200 (242)
T 3l8d_A 198 IGV 200 (242)
T ss_dssp EEE
T ss_pred ecc
Confidence 765
No 45
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.74 E-value=2.7e-17 Score=134.25 Aligned_cols=153 Identities=8% Similarity=0.042 Sum_probs=113.9
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-CCC-c-cE
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IPA-A-DA 159 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-~p~-~-D~ 159 (254)
..+.+.+.++ ..++.+|||||||+|.++..+++ ++.+ ++++|+ +.+++.++...+++|+.+|+.+. ++. . |+
T Consensus 22 ~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~ 97 (261)
T 3ege_A 22 IVNAIINLLN-LPKGSVIADIGAGTGGYSVALAN--QGLF-VYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDG 97 (261)
T ss_dssp HHHHHHHHHC-CCTTCEEEEETCTTSHHHHHHHT--TTCE-EEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSE
T ss_pred HHHHHHHHhC-CCCCCEEEEEcCcccHHHHHHHh--CCCE-EEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeE
Confidence 3455666663 67789999999999999999997 5677 999999 99999988878999999999775 443 3 99
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHH
Q 025363 160 IFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGF 239 (254)
Q Consensus 160 v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 239 (254)
|++.+++|++++ ...++++++++|| ||++++.+...+.... .+.. ..+... .. .......+.+++. +++
T Consensus 98 v~~~~~l~~~~~--~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~-~~~~---~~~~~~-~~--~~~~~~~~~~~~~-~l~ 166 (261)
T 3ege_A 98 VISILAIHHFSH--LEKSFQEMQRIIR-DGTIVLLTFDIRLAQR-IWLY---DYFPFL-WE--DALRFLPLDEQIN-LLQ 166 (261)
T ss_dssp EEEESCGGGCSS--HHHHHHHHHHHBC-SSCEEEEEECGGGCCC-CGGG---GTCHHH-HH--HHHTSCCHHHHHH-HHH
T ss_pred EEEcchHhhccC--HHHHHHHHHHHhC-CcEEEEEEcCCchhHH-HHHH---HHHHHH-hh--hhhhhCCCHHHHH-HHH
Confidence 999999999954 4689999999999 9999998875432211 1110 001100 00 1112335678888 999
Q ss_pred hCCCCeeeEEEc
Q 025363 240 FAGFPHLRLYRV 251 (254)
Q Consensus 240 ~aGf~~~~~~~~ 251 (254)
++||+.+++..+
T Consensus 167 ~aGF~~v~~~~~ 178 (261)
T 3ege_A 167 ENTKRRVEAIPF 178 (261)
T ss_dssp HHHCSEEEEEEC
T ss_pred HcCCCceeEEEe
Confidence 999999887765
No 46
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.74 E-value=6.3e-18 Score=135.74 Aligned_cols=131 Identities=16% Similarity=0.165 Sum_probs=106.6
Q ss_pred CeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCCC-c-cEEEecccccc
Q 025363 99 KRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA-A-DAIFMKWVLTT 168 (254)
Q Consensus 99 ~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p~-~-D~v~~~~vlh~ 168 (254)
.+|||||||+|.++..+++ ++.+ ++++|+ +.+++.+++. .+++++.+|+.+..+. . |+|++..++|+
T Consensus 68 ~~vLDiGcG~G~~~~~l~~--~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS--PERF-VVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB--TTEE-EEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHh--CCCe-EEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 5999999999999999876 4567 999999 8888776643 3599999999887444 3 99999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCCeeeE
Q 025363 169 WTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHLRL 248 (254)
Q Consensus 169 ~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 248 (254)
+++++...++++++++|||||+|++.+.........+ ...++.++|.++++++||+++++
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGP--------------------PYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCS--------------------SCCCCHHHHHHHHGGGTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCC--------------------CccCCHHHHHHHHHHcCCeEEEE
Confidence 9988889999999999999999999876543221100 11258899999999999999988
Q ss_pred EEcc
Q 025363 249 YRVL 252 (254)
Q Consensus 249 ~~~~ 252 (254)
..+.
T Consensus 205 ~~~~ 208 (235)
T 3lcc_A 205 EENP 208 (235)
T ss_dssp EECT
T ss_pred EecC
Confidence 7654
No 47
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.73 E-value=1e-17 Score=131.71 Aligned_cols=140 Identities=8% Similarity=-0.013 Sum_probs=105.2
Q ss_pred HHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------------------CCcEEEeC
Q 025363 88 VLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------------------PGVTHIGG 148 (254)
Q Consensus 88 i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------------------~~i~~~~~ 148 (254)
+++.+ ...++.+|||+|||+|..+..++++ +.+ ++++|+ +.|++.+++. .+++++.+
T Consensus 14 ~~~~l-~~~~~~~vLD~GCG~G~~~~~la~~--g~~-V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 14 YWSSL-NVVPGARVLVPLCGKSQDMSWLSGQ--GYH-VVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHH-CCCTTCEEEETTTCCSHHHHHHHHH--CCE-EEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHhc-ccCCCCEEEEeCCCCcHhHHHHHHC--CCe-EEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 33444 2567889999999999999999998 457 999999 8898876532 47999999
Q ss_pred CCCCC-CC--Cc-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhcccc
Q 025363 149 DMFKS-IP--AA-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRA 224 (254)
Q Consensus 149 d~~~~-~p--~~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (254)
|+++. .+ +. |+|++..++|++++++..+++++++++|||||++++.....+.... ..
T Consensus 90 d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~-------------------~~ 150 (203)
T 1pjz_A 90 DFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALL-------------------EG 150 (203)
T ss_dssp CCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSS-------------------SS
T ss_pred ccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcccc-------------------CC
Confidence 99876 33 23 9999999999999888889999999999999995554433221100 00
Q ss_pred CceecCHHHHHHHHHhCCCCeeeEEEc
Q 025363 225 KGNHRTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 225 ~~~~~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
.....+.+++.+++++ ||++..+...
T Consensus 151 ~~~~~~~~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 151 PPFSVPQTWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp CCCCCCHHHHHHTSCS-SEEEEEEEES
T ss_pred CCCCCCHHHHHHHhcC-CcEEEEeccc
Confidence 0112578899999988 9988776543
No 48
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.73 E-value=8.5e-18 Score=138.91 Aligned_cols=160 Identities=15% Similarity=0.125 Sum_probs=111.1
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCC-CCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC-CCCc-
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRF-ICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPAA- 157 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~-~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~-~p~~- 157 (254)
.+++.+....+..+|||||||+|.++..+++.+|. .+ ++++|+ +.+++.+++. .+++++.+|+.+. .++.
T Consensus 12 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 90 (284)
T 3gu3_A 12 FLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSK-YTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKY 90 (284)
T ss_dssp HHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCE-EEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCE
T ss_pred HHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCe
Confidence 34444434567899999999999999999999985 77 999999 8888766543 3799999999875 4444
Q ss_pred cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcccc-----C---CCCCChhhhhhcccchHhhhhccccCceec
Q 025363 158 DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL-----P---DDSNESQRTRALLEGDIFVMTIYRAKGNHR 229 (254)
Q Consensus 158 D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (254)
|+|++..++|++++. .+++++++++|||||++++.++.. . +....+.......+..+........+....
T Consensus 91 D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (284)
T 3gu3_A 91 DIAICHAFLLHMTTP--ETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGN 168 (284)
T ss_dssp EEEEEESCGGGCSSH--HHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTT
T ss_pred eEEEECChhhcCCCH--HHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhccccc
Confidence 999999999999655 589999999999999999998761 1 111100000000011111000001122234
Q ss_pred CHHHHHHHHHhCCCCeeeEE
Q 025363 230 TEQEFKQLGFFAGFPHLRLY 249 (254)
Q Consensus 230 t~~e~~~ll~~aGf~~~~~~ 249 (254)
+..++.++++++||+.+++.
T Consensus 169 ~~~~l~~~l~~aGF~~v~~~ 188 (284)
T 3gu3_A 169 IGMKIPIYLSELGVKNIECR 188 (284)
T ss_dssp GGGTHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEE
Confidence 56789999999999988763
No 49
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.73 E-value=2.1e-17 Score=142.11 Aligned_cols=145 Identities=18% Similarity=0.218 Sum_probs=111.5
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCCC--------------CCcEEEeCCCCC------
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPSI--------------PGVTHIGGDMFK------ 152 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~~--------------~~i~~~~~d~~~------ 152 (254)
..++.+|||||||+|.++..+++.+ |+.+ ++++|+ +.+++.++++ ++++|+.+|+.+
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~ 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGK-VIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP 159 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCE-EEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc
Confidence 3467899999999999999999987 6778 999999 8888877653 589999999987
Q ss_pred -CCCC-c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceec
Q 025363 153 -SIPA-A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHR 229 (254)
Q Consensus 153 -~~p~-~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (254)
+++. . |+|++..++|++++ ...+|++++++|||||+|++.+............ . ...... ...+..+
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~-----~-~~~~~~--~~~~~~~ 229 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQ-----Q-DPILYG--ECLGGAL 229 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHH-----H-CHHHHH--TTCTTCC
T ss_pred CCCCCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHh-----h-hHHHhh--cccccCC
Confidence 4443 3 99999999999865 4699999999999999999998776543211110 0 111111 1223457
Q ss_pred CHHHHHHHHHhCCCCeeeEEE
Q 025363 230 TEQEFKQLGFFAGFPHLRLYR 250 (254)
Q Consensus 230 t~~e~~~ll~~aGf~~~~~~~ 250 (254)
+.++|.++|+++||+.+++..
T Consensus 230 ~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 230 YLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp BHHHHHHHHHHTTCCCEEEEE
T ss_pred CHHHHHHHHHHCCCceEEEEe
Confidence 889999999999999887654
No 50
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.73 E-value=1.4e-17 Score=134.26 Aligned_cols=148 Identities=15% Similarity=0.099 Sum_probs=106.9
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--CCcEEEeCCCCCCCCC-c-cEEEeccccccCC
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFKSIPA-A-DAIFMKWVLTTWT 170 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--~~i~~~~~d~~~~~p~-~-D~v~~~~vlh~~~ 170 (254)
.++.+|||||||+|.++..+++..+ + ++++|+ +.+++.+++. .+++++.+|+.+..+. . |+|++.+++|+++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~-v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 117 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--D-ITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHID 117 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--C-EEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--c-EEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhc
Confidence 3567899999999999999998865 5 999999 8888777654 2899999999776443 3 9999999999996
Q ss_pred HHHHHHHHHHHH-HhCCCCCEEEEEccccCCCCCChhh---hhhccc--chHhhhhccccCceecCHHHHHHHHHhCCCC
Q 025363 171 DDECKLIMENCY-KALPAGGKLIACEPVLPDDSNESQR---TRALLE--GDIFVMTIYRAKGNHRTEQEFKQLGFFAGFP 244 (254)
Q Consensus 171 ~~~~~~il~~~~-~~L~pgG~l~i~d~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 244 (254)
+. .++|++++ ++|||||+|++.++....... ... ...... +.-.... ......++.+++.++++++||+
T Consensus 118 ~~--~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~Gf~ 192 (250)
T 2p7i_A 118 DP--VALLKRINDDWLAEGGRLFLVCPNANAVSR-QIAVKMGIISHNSAVTEAEFA--HGHRCTYALDTLERDASRAGLQ 192 (250)
T ss_dssp SH--HHHHHHHHHTTEEEEEEEEEEEECTTCHHH-HHHHHTTSSSSTTCCCHHHHH--TTCCCCCCHHHHHHHHHHTTCE
T ss_pred CH--HHHHHHHHHHhcCCCCEEEEEcCChHHHHH-HHHHHcCccccchhccccccc--ccccccCCHHHHHHHHHHCCCe
Confidence 54 68999999 999999999998764321100 000 000000 0000000 1123457999999999999999
Q ss_pred eeeEEEc
Q 025363 245 HLRLYRV 251 (254)
Q Consensus 245 ~~~~~~~ 251 (254)
++++..+
T Consensus 193 ~~~~~~~ 199 (250)
T 2p7i_A 193 VTYRSGI 199 (250)
T ss_dssp EEEEEEE
T ss_pred EEEEeee
Confidence 9987654
No 51
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.71 E-value=2e-17 Score=137.65 Aligned_cols=166 Identities=10% Similarity=0.071 Sum_probs=114.9
Q ss_pred chhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---------CCcEEEeCCCC
Q 025363 82 VPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---------PGVTHIGGDMF 151 (254)
Q Consensus 82 ~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---------~~i~~~~~d~~ 151 (254)
......+++.++ .. ..+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. .+++++.+|+.
T Consensus 69 ~~~~~~~~~~~~-~~-~~~vLDlGcG~G~~~~~l~~~--~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 69 TSEAREFATRTG-PV-SGPVLELAAGMGRLTFPFLDL--GWE-VTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHHHC-CC-CSCEEEETCTTTTTHHHHHTT--TCC-EEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred cHHHHHHHHhhC-CC-CCcEEEEeccCCHHHHHHHHc--CCe-EEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 344566777664 33 349999999999999999988 467 999999 8888877653 47999999998
Q ss_pred CC-CCCc-cEEEe-ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCC----CCh--hh---hh---hcc----
Q 025363 152 KS-IPAA-DAIFM-KWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDS----NES--QR---TR---ALL---- 212 (254)
Q Consensus 152 ~~-~p~~-D~v~~-~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~----~~~--~~---~~---~~~---- 212 (254)
+. .++. |+|++ ..++|++++++..++|++++++|||||+|++......... ... .. .. ...
T Consensus 144 ~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 223 (299)
T 3g2m_A 144 AFALDKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLP 223 (299)
T ss_dssp BCCCSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEE
T ss_pred cCCcCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEec
Confidence 86 4444 98886 4778888888889999999999999999999766543210 000 00 00 000
Q ss_pred ---cchHhhhh---------ccccCceecCHHHHHHHHHhCCCCeeeEEEcc
Q 025363 213 ---EGDIFVMT---------IYRAKGNHRTEQEFKQLGFFAGFPHLRLYRVL 252 (254)
Q Consensus 213 ---~~~~~~~~---------~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 252 (254)
...+.... .....-+.++.++|.++|+++||+++++..+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 224 AEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp EEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred cccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 00000000 00001124699999999999999999988764
No 52
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.71 E-value=1.8e-17 Score=134.45 Aligned_cols=158 Identities=16% Similarity=0.085 Sum_probs=109.1
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---CCcEEEeCCCCCC-CCC-c-c
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---PGVTHIGGDMFKS-IPA-A-D 158 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---~~i~~~~~d~~~~-~p~-~-D 158 (254)
..+.+.++ ..++.+|||||||+|.++..+++..+. + ++++|+ +.+++.+++. .+++++.+|+.+. ++. . |
T Consensus 34 ~~l~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~~~~-~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD 110 (253)
T 3g5l_A 34 HELKKMLP-DFNQKTVLDLGCGFGWHCIYAAEHGAK-K-VLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYN 110 (253)
T ss_dssp HHHHTTCC-CCTTCEEEEETCTTCHHHHHHHHTTCS-E-EEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEE
T ss_pred HHHHHhhh-ccCCCEEEEECCCCCHHHHHHHHcCCC-E-EEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeE
Confidence 34555553 557889999999999999999998654 6 999999 8888777653 6899999999765 443 3 9
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC------------CCCCChhhhhhcccch-----Hhhhhc
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP------------DDSNESQRTRALLEGD-----IFVMTI 221 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~------------~~~~~~~~~~~~~~~~-----~~~~~~ 221 (254)
+|++..++|++++ ..++|++++++|||||+|++...... ........ .....++ .....
T Consensus 111 ~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~- 186 (253)
T 3g5l_A 111 VVLSSLALHYIAS--FDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHW-PVDRYFNESMRTSHFLG- 186 (253)
T ss_dssp EEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEE-EECCTTCCCEEEEEETT-
T ss_pred EEEEchhhhhhhh--HHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEE-EeccccccceEEEeecc-
Confidence 9999999999954 57999999999999999999743211 00000000 0000000 00000
Q ss_pred cccCceecCHHHHHHHHHhCCCCeeeEEE
Q 025363 222 YRAKGNHRTEQEFKQLGFFAGFPHLRLYR 250 (254)
Q Consensus 222 ~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 250 (254)
.......+|.++|.++|+++||+++++..
T Consensus 187 ~~~~~~~~t~~~~~~~l~~aGF~~~~~~e 215 (253)
T 3g5l_A 187 EDVQKYHRTVTTYIQTLLKNGFQINSVIE 215 (253)
T ss_dssp EEEEEECCCHHHHHHHHHHTTEEEEEEEC
T ss_pred ccCccEecCHHHHHHHHHHcCCeeeeeec
Confidence 00001224999999999999999998764
No 53
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.71 E-value=2.3e-17 Score=136.29 Aligned_cols=159 Identities=16% Similarity=0.081 Sum_probs=112.2
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCC--
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI-- 154 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~-- 154 (254)
...++..++ . ++.+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. ++++++.+|+.+..
T Consensus 58 l~~~l~~~~-~-~~~~vLDiGcG~G~~~~~l~~~--~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 132 (285)
T 4htf_A 58 LDRVLAEMG-P-QKLRVLDAGGGEGQTAIKMAER--GHQ-VILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH 132 (285)
T ss_dssp HHHHHHHTC-S-SCCEEEEETCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG
T ss_pred HHHHHHhcC-C-CCCEEEEeCCcchHHHHHHHHC--CCE-EEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh
Confidence 334555553 3 3679999999999999999988 567 999999 8888877653 57999999997753
Q ss_pred CC-c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhc------cccCc
Q 025363 155 PA-A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTI------YRAKG 226 (254)
Q Consensus 155 p~-~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 226 (254)
+. . |+|++..++|++++. ..+|++++++|||||++++.+....... ........+....... .....
T Consensus 133 ~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (285)
T 4htf_A 133 LETPVDLILFHAVLEWVADP--RSVLQTLWSVLRPGGVLSLMFYNAHGLL---MHNMVAGNFDYVQAGMPKKKKRTLSPD 207 (285)
T ss_dssp CSSCEEEEEEESCGGGCSCH--HHHHHHHHHTEEEEEEEEEEEEBHHHHH---HHHHHTTCHHHHHTTCCCC----CCCS
T ss_pred cCCCceEEEECchhhcccCH--HHHHHHHHHHcCCCeEEEEEEeCCchHH---HHHHHhcCHHHHhhhccccccccCCCC
Confidence 33 3 999999999999654 6899999999999999999876432110 0000000000000000 00112
Q ss_pred eecCHHHHHHHHHhCCCCeeeEEEccC
Q 025363 227 NHRTEQEFKQLGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 227 ~~~t~~e~~~ll~~aGf~~~~~~~~~~ 253 (254)
..++.+++.++++++||+++++..+..
T Consensus 208 ~~~~~~~l~~~l~~aGf~v~~~~~~~~ 234 (285)
T 4htf_A 208 YPRDPTQVYLWLEEAGWQIMGKTGVRV 234 (285)
T ss_dssp CCBCHHHHHHHHHHTTCEEEEEEEESS
T ss_pred CCCCHHHHHHHHHHCCCceeeeeeEEE
Confidence 446899999999999999998887643
No 54
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.71 E-value=7.1e-17 Score=127.98 Aligned_cols=143 Identities=11% Similarity=0.059 Sum_probs=103.1
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----------CCcEEEeCCCCCC-CC-C-ccE
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----------PGVTHIGGDMFKS-IP-A-ADA 159 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----------~~i~~~~~d~~~~-~p-~-~D~ 159 (254)
..+..+|||||||+|.++..+++..+..+ ++++|+ +.+++.+++. .+++++.+|+... .+ + .|+
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 105 (217)
T 3jwh_A 27 QSNARRVIDLGCGQGNLLKILLKDSFFEQ-ITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDA 105 (217)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHHCTTCSE-EEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSE
T ss_pred hcCCCEEEEeCCCCCHHHHHHHhhCCCCE-EEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCE
Confidence 34578999999999999999999988778 999999 8888877643 2799999998654 32 2 399
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHH----
Q 025363 160 IFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFK---- 235 (254)
Q Consensus 160 v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~---- 235 (254)
|++..++|++++++..++|++++++|||||.+++...... .... ..+...... .......++.+++.
T Consensus 106 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~-------~~~~-~~~~~~~~~-~~~~~~~~~~~~l~~~~~ 176 (217)
T 3jwh_A 106 ATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEY-------NVKF-ANLPAGKLR-HKDHRFEWTRSQFQNWAN 176 (217)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHH-------HHHT-C------------CCSCBCHHHHHHHHH
T ss_pred EeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCccc-------chhh-ccccccccc-ccccccccCHHHHHHHHH
Confidence 9999999999988889999999999999997776543210 0000 000000000 01112336888888
Q ss_pred HHHHhCCCCeee
Q 025363 236 QLGFFAGFPHLR 247 (254)
Q Consensus 236 ~ll~~aGf~~~~ 247 (254)
++++++||++..
T Consensus 177 ~~~~~~Gf~v~~ 188 (217)
T 3jwh_A 177 KITERFAYNVQF 188 (217)
T ss_dssp HHHHHSSEEEEE
T ss_pred HHHHHcCceEEE
Confidence 899999998643
No 55
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.71 E-value=1.6e-17 Score=138.67 Aligned_cols=154 Identities=16% Similarity=0.107 Sum_probs=110.9
Q ss_pred CCCCCeEEEecCcccHHHHHHH-HHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC-CCCc-cEEEec
Q 025363 95 FKGVKRLVDVGGSAGDCLRMIL-QKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IPAA-DAIFMK 163 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~-~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~-~p~~-D~v~~~ 163 (254)
..++.+|||||||+|..+..++ ...|+.+ ++++|+ +.+++.++++ ++++++.+|+.+. .++. |+|++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 194 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQ-LVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSN 194 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCE-EEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCe-EEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEEC
Confidence 5678899999999999999986 5678888 999999 8888777643 4599999999876 4443 999999
Q ss_pred cccccCCH-HHHHHHHHHHHHhCCCCCEEEEEccccCCCCCCh--hhhhhc-----ccchHhhhhccccC--ceecCHHH
Q 025363 164 WVLTTWTD-DECKLIMENCYKALPAGGKLIACEPVLPDDSNES--QRTRAL-----LEGDIFVMTIYRAK--GNHRTEQE 233 (254)
Q Consensus 164 ~vlh~~~~-~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~--~~~~t~~e 233 (254)
.++|++++ +....++++++++|||||+|++.+...+...... +..... ......... .... ...++.++
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 273 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTR-LIQPRWNALRTHAQ 273 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHH-TTCCSCCCCCCHHH
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHH-HHhhhhhccCCHHH
Confidence 99999864 4456799999999999999999887654332110 000000 000000000 0011 12368999
Q ss_pred HHHHHHhCCCCeeeEEE
Q 025363 234 FKQLGFFAGFPHLRLYR 250 (254)
Q Consensus 234 ~~~ll~~aGf~~~~~~~ 250 (254)
+.++++++||+++++..
T Consensus 274 ~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 274 TRAQLEEAGFTDLRFED 290 (305)
T ss_dssp HHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHCCCEEEEEEc
Confidence 99999999999998875
No 56
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.70 E-value=4.9e-17 Score=129.04 Aligned_cols=143 Identities=13% Similarity=0.088 Sum_probs=103.1
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----------CCcEEEeCCCCCC-CCC--ccE
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----------PGVTHIGGDMFKS-IPA--ADA 159 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----------~~i~~~~~d~~~~-~p~--~D~ 159 (254)
..+..+|||||||+|.++..+++..+..+ ++++|+ +.+++.+++. .+++++.+|+... .+. .|+
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 105 (219)
T 3jwg_A 27 SVNAKKVIDLGCGEGNLLSLLLKDKSFEQ-ITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDA 105 (219)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHTSTTCCE-EEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSE
T ss_pred hcCCCEEEEecCCCCHHHHHHHhcCCCCE-EEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCE
Confidence 34578999999999999999999988788 999999 8888877653 1899999999554 222 399
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHH----
Q 025363 160 IFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFK---- 235 (254)
Q Consensus 160 v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~---- 235 (254)
|++..++|++++++..+++++++++|||||.+++.........-. .+...... .......++.+++.
T Consensus 106 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~l~~~~~ 176 (219)
T 3jwg_A 106 ATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYG--------NLFEGNLR-HRDHRFEWTRKEFQTWAV 176 (219)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCC--------CT-----G-GGCCTTSBCHHHHHHHHH
T ss_pred EEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhc--------ccCccccc-ccCceeeecHHHHHHHHH
Confidence 999999999998888999999999999999666544321100000 00000000 01112335888888
Q ss_pred HHHHhCCCCeee
Q 025363 236 QLGFFAGFPHLR 247 (254)
Q Consensus 236 ~ll~~aGf~~~~ 247 (254)
++++++||++..
T Consensus 177 ~l~~~~Gf~v~~ 188 (219)
T 3jwg_A 177 KVAEKYGYSVRF 188 (219)
T ss_dssp HHHHHHTEEEEE
T ss_pred HHHHHCCcEEEE
Confidence 889999997643
No 57
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.70 E-value=1.4e-16 Score=127.34 Aligned_cols=150 Identities=17% Similarity=0.082 Sum_probs=108.0
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----------CCcEEEeCCCCCC-CCC--ccE
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----------PGVTHIGGDMFKS-IPA--ADA 159 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----------~~i~~~~~d~~~~-~p~--~D~ 159 (254)
.+++.+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. .++++..+|+.+. ++. .|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 104 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK--GYS-VTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDF 104 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC--CCe-EEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeE
Confidence 346789999999999999999998 557 999999 8887766542 2579999999875 444 399
Q ss_pred EEeccccccCCH-HHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhc--c-----------ccC
Q 025363 160 IFMKWVLTTWTD-DECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTI--Y-----------RAK 225 (254)
Q Consensus 160 v~~~~vlh~~~~-~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~ 225 (254)
|++..++|++++ ++...+|++++++|||||++++.+....... +.. .......+..... . ...
T Consensus 105 v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (235)
T 3sm3_A 105 AVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHL--KLY-RKRYLHDFPITKEEGSFLARDPETGETEFI 181 (235)
T ss_dssp EEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTS--HHH-HHHHHHHHHHHCSTTEEEEECTTTCCEEEE
T ss_pred EEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhH--HHH-HHHhhhhccchhhhcceEecccccCCccee
Confidence 999999999975 4566899999999999999999987653321 110 0000000000000 0 000
Q ss_pred ceecCHHHHHHHHHhCCCCeeeEEE
Q 025363 226 GNHRTEQEFKQLGFFAGFPHLRLYR 250 (254)
Q Consensus 226 ~~~~t~~e~~~ll~~aGf~~~~~~~ 250 (254)
...++.++|.++++++||+++++..
T Consensus 182 ~~~~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 182 AHHFTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp EECBCHHHHHHHHHTTTEEEEEEEE
T ss_pred eEeCCHHHHHHHHHHcCCEEEEEEe
Confidence 1346999999999999999988764
No 58
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=4.7e-17 Score=132.28 Aligned_cols=155 Identities=13% Similarity=0.081 Sum_probs=110.9
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCCCCC-c-cEE
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKSIPA-A-DAI 160 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~~p~-~-D~v 160 (254)
...+++.++ ..++.+|||||||+|.++..+++.+|+.+ ++++|+ +.+++.+++. ++++++.+|+.+..+. . |+|
T Consensus 22 ~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v 99 (259)
T 2p35_A 22 ARDLLAQVP-LERVLNGYDLGCGPGNSTELLTDRYGVNV-ITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLL 99 (259)
T ss_dssp HHHHHTTCC-CSCCSSEEEETCTTTHHHHHHHHHHCTTS-EEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEE
T ss_pred HHHHHHhcC-CCCCCEEEEecCcCCHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEE
Confidence 345666663 66788999999999999999999999889 999999 8888887653 6899999999775433 3 999
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccch---Hhh-hh-ccccCceecCHHHHH
Q 025363 161 FMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGD---IFV-MT-IYRAKGNHRTEQEFK 235 (254)
Q Consensus 161 ~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~---~~~-~~-~~~~~~~~~t~~e~~ 235 (254)
++..++|++++ ...+|++++++|||||++++........ +.......... ... .. .........+.++|.
T Consensus 100 ~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (259)
T 2p35_A 100 YANAVFQWVPD--HLAVLSQLMDQLESGGVLAVQMPDNLQE---PTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYF 174 (259)
T ss_dssp EEESCGGGSTT--HHHHHHHHGGGEEEEEEEEEEEECCTTS---HHHHHHHHHHHHSTTGGGC-------CCCCCHHHHH
T ss_pred EEeCchhhCCC--HHHHHHHHHHhcCCCeEEEEEeCCCCCc---HHHHHHHHHhcCcchHHHhccccccccCCCCHHHHH
Confidence 99999999854 5689999999999999999987533211 11000000000 000 00 000012346899999
Q ss_pred HHHHhCCCCee
Q 025363 236 QLGFFAGFPHL 246 (254)
Q Consensus 236 ~ll~~aGf~~~ 246 (254)
++|+++||++.
T Consensus 175 ~~l~~aGf~v~ 185 (259)
T 2p35_A 175 NALSPKSSRVD 185 (259)
T ss_dssp HHHGGGEEEEE
T ss_pred HHHHhcCCceE
Confidence 99999999743
No 59
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.70 E-value=1.2e-17 Score=138.57 Aligned_cols=146 Identities=16% Similarity=0.176 Sum_probs=104.8
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----------------------------------
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---------------------------------- 140 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---------------------------------- 140 (254)
.++.+|||||||+|.++..+++.++..+ ++++|+ +.+++.+++.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~-v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSR-MVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSE-EEEEESCHHHHHHHHHTC---------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCE-EEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 3578999999999999999999999888 999999 8888766542
Q ss_pred ------------------------------CCcEEEeCCCCCCC------CC--ccEEEeccccccC----CHHHHHHHH
Q 025363 141 ------------------------------PGVTHIGGDMFKSI------PA--ADAIFMKWVLTTW----TDDECKLIM 178 (254)
Q Consensus 141 ------------------------------~~i~~~~~d~~~~~------p~--~D~v~~~~vlh~~----~~~~~~~il 178 (254)
.+|+|+.+|+.... +. .|+|++..+++++ +++...++|
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 37999999998653 22 3999999998554 677889999
Q ss_pred HHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHh--CCCCeeeEEEc
Q 025363 179 ENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFF--AGFPHLRLYRV 251 (254)
Q Consensus 179 ~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~--aGf~~~~~~~~ 251 (254)
++++++|+|||+|++....+... .......-.+.. .........+++.++|.+ +||+.+++...
T Consensus 204 ~~~~~~LkpGG~lil~~~~~~~y-----~~~~~~~~~~~~----~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEPQPWSSY-----GKRKTLTETIYK----NYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHHHEEEEEEEEEECCCHHHH-----HTTTTSCHHHHH----HHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHHhCCCcEEEEecCCchhh-----hhhhcccHHHHh----hhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 99999999999999854322110 000000000000 001223457899999999 99998877654
No 60
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.70 E-value=6.6e-17 Score=130.10 Aligned_cols=160 Identities=19% Similarity=0.155 Sum_probs=110.0
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---CCcEEEeCCCCCC-CCC-c-c
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---PGVTHIGGDMFKS-IPA-A-D 158 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---~~i~~~~~d~~~~-~p~-~-D 158 (254)
+.+.+.++ ..++.+|||||||+|.++..+++... .+ ++++|+ +.+++.+++. .+++++.+|+.+. .+. . |
T Consensus 33 ~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~-~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD 109 (243)
T 3bkw_A 33 PALRAMLP-EVGGLRIVDLGCGFGWFCRWAHEHGA-SY-VLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFD 109 (243)
T ss_dssp HHHHHHSC-CCTTCEEEEETCTTCHHHHHHHHTTC-SE-EEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEE
T ss_pred HHHHHhcc-ccCCCEEEEEcCcCCHHHHHHHHCCC-Ce-EEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCce
Confidence 34556563 56788999999999999999998832 26 999999 8888877654 4799999999775 443 3 9
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCC--CCCChhhhhh----cccch---------Hhhhhccc
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD--DSNESQRTRA----LLEGD---------IFVMTIYR 223 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~--~~~~~~~~~~----~~~~~---------~~~~~~~~ 223 (254)
+|++..++|++++ ...+|++++++|+|||++++....... .....+.... ..... ..... ..
T Consensus 110 ~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 186 (243)
T 3bkw_A 110 LAYSSLALHYVED--VARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLA-KG 186 (243)
T ss_dssp EEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHH-HS
T ss_pred EEEEeccccccch--HHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeecc-Cc
Confidence 9999999999864 568999999999999999997643110 0000000000 00000 00000 00
Q ss_pred cCceecCHHHHHHHHHhCCCCeeeEEEc
Q 025363 224 AKGNHRTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 224 ~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
.....+|.++|.++|+++||+++++...
T Consensus 187 ~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 187 VVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp CCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred eEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 1123368999999999999999988754
No 61
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.69 E-value=7.7e-17 Score=129.37 Aligned_cols=102 Identities=18% Similarity=0.216 Sum_probs=85.3
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCC-CCCc-cEEEe-ccccccCC
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPAA-DAIFM-KWVLTTWT 170 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~-~p~~-D~v~~-~~vlh~~~ 170 (254)
.+..+|||||||+|.++..+++..+ + ++++|+ +.+++.+++. ++++++.+|+.+. .+.. |+|++ ..++|++.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~-v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~ 115 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--D-TAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLK 115 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--E-EEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--c-EEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcC
Confidence 4678999999999999999999976 6 999999 8888887654 6799999999875 4333 99995 55898875
Q ss_pred -HHHHHHHHHHHHHhCCCCCEEEEEccccCC
Q 025363 171 -DDECKLIMENCYKALPAGGKLIACEPVLPD 200 (254)
Q Consensus 171 -~~~~~~il~~~~~~L~pgG~l~i~d~~~~~ 200 (254)
.++..++|++++++|+|||++++.+...++
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (239)
T 3bxo_A 116 TTEELGAAVASFAEHLEPGGVVVVEPWWFPE 146 (239)
T ss_dssp SHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEeccCcc
Confidence 467889999999999999999998765543
No 62
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.69 E-value=5.8e-17 Score=130.85 Aligned_cols=150 Identities=14% Similarity=0.039 Sum_probs=108.9
Q ss_pred CCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---CCcEEEeCCCCCC-CCC-------ccEEE
Q 025363 94 GFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---PGVTHIGGDMFKS-IPA-------ADAIF 161 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---~~i~~~~~d~~~~-~p~-------~D~v~ 161 (254)
...++.+|||||||+|.++..+++..+ + ++++|+ +.+++.+++. .+++++.+|+.+. .+. .|+|+
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~--~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~ 129 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP--R-VIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIY 129 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS--C-EEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEE
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC--C-EEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEE
Confidence 356678999999999999999999987 6 999999 8888777543 5899999999874 221 48999
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhc-----ccchHhhhhccccCceecCHHHHHH
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRAL-----LEGDIFVMTIYRAKGNHRTEQEFKQ 236 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~t~~e~~~ 236 (254)
+..++|++++++..++|++++++|||||+|++.+...++. ....... ....+....-.......++.+++.+
T Consensus 130 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (245)
T 3ggd_A 130 MRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCI---DFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIEL 206 (245)
T ss_dssp EESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHH---HHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHH
T ss_pred EcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcccc---HHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHH
Confidence 9999999998888999999999999999999998865421 0000000 0000000000001112368999999
Q ss_pred HHHhCCCCeeeEEEc
Q 025363 237 LGFFAGFPHLRLYRV 251 (254)
Q Consensus 237 ll~~aGf~~~~~~~~ 251 (254)
++ +||+++....+
T Consensus 207 ~~--aGf~~~~~~~~ 219 (245)
T 3ggd_A 207 YF--PDFEILSQGEG 219 (245)
T ss_dssp HC--TTEEEEEEECC
T ss_pred Hh--CCCEEEecccc
Confidence 99 99999876554
No 63
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.69 E-value=4.4e-17 Score=134.20 Aligned_cols=161 Identities=14% Similarity=0.055 Sum_probs=113.2
Q ss_pred hhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCC-CCCc-c
Q 025363 83 PFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPAA-D 158 (254)
Q Consensus 83 ~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~-~p~~-D 158 (254)
...+.+++.++ ..++.+|||||||+|.++..+++ ++.+ ++++|+ +.+++.+++. ++++++.+|+.+. .++. |
T Consensus 44 ~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD 119 (279)
T 3ccf_A 44 QYGEDLLQLLN-PQPGEFILDLGCGTGQLTEKIAQ--SGAE-VLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLD 119 (279)
T ss_dssp SSCCHHHHHHC-CCTTCEEEEETCTTSHHHHHHHH--TTCE-EEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEE
T ss_pred HHHHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHh--CCCe-EEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcC
Confidence 34555666664 66788999999999999999998 6778 999999 8888877654 6899999999875 4333 9
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhh--hccccCceecCHHHHHH
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVM--TIYRAKGNHRTEQEFKQ 236 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~t~~e~~~ 236 (254)
+|++..++|++++. ..+|++++++|||||++++........ ..........+..... ......-..++.+++.+
T Consensus 120 ~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (279)
T 3ccf_A 120 AVFSNAMLHWVKEP--EAAIASIHQALKSGGRFVAEFGGKGNI--KYILEALYNALETLGIHNPQALNPWYFPSIGEYVN 195 (279)
T ss_dssp EEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECTTTT--HHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHH
T ss_pred EEEEcchhhhCcCH--HHHHHHHHHhcCCCcEEEEEecCCcch--HHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHH
Confidence 99999999998654 589999999999999999976543221 0110000000000000 00000113458999999
Q ss_pred HHHhCCCCeeeEEEc
Q 025363 237 LGFFAGFPHLRLYRV 251 (254)
Q Consensus 237 ll~~aGf~~~~~~~~ 251 (254)
+|+++||+++++...
T Consensus 196 ~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 196 ILEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHHTEEEEEEEEE
T ss_pred HHHHcCCEEEEEEEe
Confidence 999999998876543
No 64
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.69 E-value=1.3e-17 Score=127.13 Aligned_cols=138 Identities=14% Similarity=0.118 Sum_probs=108.0
Q ss_pred HHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCCCCC--ccEEEec
Q 025363 88 VLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKSIPA--ADAIFMK 163 (254)
Q Consensus 88 i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~~p~--~D~v~~~ 163 (254)
+++.++ ..++.+|||||||+|.++..+++... + ++++|+ +.+++.+++. +++++..+| .+++. .|+|++.
T Consensus 9 ~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~--~-v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v~~~ 82 (170)
T 3i9f_A 9 YLPNIF-EGKKGVIVDYGCGNGFYCKYLLEFAT--K-LYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFILFA 82 (170)
T ss_dssp THHHHH-SSCCEEEEEETCTTCTTHHHHHTTEE--E-EEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEEEEE
T ss_pred HHHhcC-cCCCCeEEEECCCCCHHHHHHHhhcC--e-EEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEEEEc
Confidence 334442 66788999999999999999999874 6 999999 8888877653 789999999 34443 3999999
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCC
Q 025363 164 WVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGF 243 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 243 (254)
.++|++++ ...++++++++|||||++++.+.........+ .....++.+++.++++ ||
T Consensus 83 ~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~l~--Gf 140 (170)
T 3i9f_A 83 NSFHDMDD--KQHVISEVKRILKDDGRVIIIDWRKENTGIGP------------------PLSIRMDEKDYMGWFS--NF 140 (170)
T ss_dssp SCSTTCSC--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS------------------CGGGCCCHHHHHHHTT--TE
T ss_pred cchhcccC--HHHHHHHHHHhcCCCCEEEEEEcCccccccCc------------------hHhhhcCHHHHHHHHh--Cc
Confidence 99999964 46899999999999999999987655432111 0112368999999999 99
Q ss_pred CeeeEEEccC
Q 025363 244 PHLRLYRVLD 253 (254)
Q Consensus 244 ~~~~~~~~~~ 253 (254)
++++...+..
T Consensus 141 ~~~~~~~~~~ 150 (170)
T 3i9f_A 141 VVEKRFNPTP 150 (170)
T ss_dssp EEEEEECSST
T ss_pred EEEEccCCCC
Confidence 9998877653
No 65
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.67 E-value=3.1e-16 Score=128.60 Aligned_cols=163 Identities=10% Similarity=0.026 Sum_probs=112.4
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hH------HHhhCCCC-------CCcEEEeCC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PE------VVAEAPSI-------PGVTHIGGD 149 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~------~~~~~~~~-------~~i~~~~~d 149 (254)
...+++.++ ..++.+|||||||+|.++..+++++ |+.+ ++++|+ +. +++.+++. ++++++.+|
T Consensus 32 ~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~-v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 32 RLAIAEAWQ-VKPGEKILEIGCGQGDLSAVLADQVGSSGH-VTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHHHT-CCTTCEEEEESCTTSHHHHHHHHHHCTTCE-EEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCE-EEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 445666664 7788999999999999999999996 6678 999999 54 66655432 579999998
Q ss_pred -CCCC---CCC--ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccc
Q 025363 150 -MFKS---IPA--ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYR 223 (254)
Q Consensus 150 -~~~~---~p~--~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (254)
+... ++. .|+|++..++|++++.. .+++.++++++|||++++.+...+........................
T Consensus 110 ~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (275)
T 3bkx_A 110 NLSDDLGPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAP 187 (275)
T ss_dssp CTTTCCGGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSC
T ss_pred hhhhccCCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccc
Confidence 4332 233 39999999999998764 478888888888999999998776442111000000000000000000
Q ss_pred --cC--ceecCHHHHHHHHHhCCCCeeeEEEc
Q 025363 224 --AK--GNHRTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 224 --~~--~~~~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
.. ...++.+++.++++++||+++++..+
T Consensus 188 ~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 188 SDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred cccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 01 12468999999999999999887665
No 66
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.67 E-value=2.4e-16 Score=128.27 Aligned_cols=146 Identities=10% Similarity=0.028 Sum_probs=102.8
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC-CCC-c-cEEEeccc
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA-A-DAIFMKWV 165 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~-~p~-~-D~v~~~~v 165 (254)
..++.+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. ++++++.+|+.+. ++. . |+|++..+
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYR-YIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHL 113 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCE-EEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESC
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCE-EEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCc
Confidence 567889999999999999999987 456 999999 8888776532 6899999999765 444 3 99999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhcccc---CceecCHHHHHHHHHhCC
Q 025363 166 LTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRA---KGNHRTEQEFKQLGFFAG 242 (254)
Q Consensus 166 lh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~t~~e~~~ll~~aG 242 (254)
+|++++ ...++++++++|||||++++. ...++ .............+.... ... ....++.+++.++++++|
T Consensus 114 l~~~~~--~~~~l~~~~~~L~pgG~l~~~-~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~G 187 (263)
T 2yqz_A 114 WHLVPD--WPKVLAEAIRVLKPGGALLEG-WDQAE--ASPEWTLQERWRAFAAEE-GFPVERGLHAKRLKEVEEALRRLG 187 (263)
T ss_dssp GGGCTT--HHHHHHHHHHHEEEEEEEEEE-EEEEC--CCHHHHHHHHHHHHHHHH-TCCCCCCHHHHHHHHHHHHHHHTT
T ss_pred hhhcCC--HHHHHHHHHHHCCCCcEEEEE-ecCCC--ccHHHHHHHHHHHHHHHh-CCCcccccccCCHHHHHHHHHHcC
Confidence 999864 468999999999999999987 21111 111000000001111000 000 112457899999999999
Q ss_pred CCeeeEE
Q 025363 243 FPHLRLY 249 (254)
Q Consensus 243 f~~~~~~ 249 (254)
|+++.+.
T Consensus 188 f~~~~~~ 194 (263)
T 2yqz_A 188 LKPRTRE 194 (263)
T ss_dssp CCCEEEE
T ss_pred CCcceEE
Confidence 9977654
No 67
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.67 E-value=2.1e-16 Score=125.90 Aligned_cols=158 Identities=18% Similarity=0.141 Sum_probs=111.3
Q ss_pred chhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC---CCC-
Q 025363 82 VPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS---IPA- 156 (254)
Q Consensus 82 ~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~---~p~- 156 (254)
....+.+++.++ .+..+|||||||+|.++..+++. + .+ ++++|+ +.+++.+++. ..++..+|+.+. ++.
T Consensus 19 ~~~~~~l~~~~~--~~~~~vLdiG~G~G~~~~~l~~~-~-~~-~~~~D~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~ 92 (230)
T 3cc8_A 19 NAVNPNLLKHIK--KEWKEVLDIGCSSGALGAAIKEN-G-TR-VSGIEAFPEAAEQAKEK-LDHVVLGDIETMDMPYEEE 92 (230)
T ss_dssp -CCCHHHHTTCC--TTCSEEEEETCTTSHHHHHHHTT-T-CE-EEEEESSHHHHHHHHTT-SSEEEESCTTTCCCCSCTT
T ss_pred HHHHHHHHHHhc--cCCCcEEEeCCCCCHHHHHHHhc-C-Ce-EEEEeCCHHHHHHHHHh-CCcEEEcchhhcCCCCCCC
Confidence 334556666663 56789999999999999999988 4 67 999999 8888887764 247888998763 333
Q ss_pred c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhh-hcccchH---hhhhccccCceecCH
Q 025363 157 A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTR-ALLEGDI---FVMTIYRAKGNHRTE 231 (254)
Q Consensus 157 ~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~t~ 231 (254)
. |+|++..++|++++. ..+|++++++|+|||++++..+..... ..... ....... .... ......++.
T Consensus 93 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 165 (230)
T 3cc8_A 93 QFDCVIFGDVLEHLFDP--WAVIEKVKPYIKQNGVILASIPNVSHI---SVLAPLLAGNWTYTEYGLLD--KTHIRFFTF 165 (230)
T ss_dssp CEEEEEEESCGGGSSCH--HHHHHHTGGGEEEEEEEEEEEECTTSH---HHHHHHHTTCCCCBSSSTTB--TTCCCCCCH
T ss_pred ccCEEEECChhhhcCCH--HHHHHHHHHHcCCCCEEEEEeCCcchH---HHHHHHhcCCceeccCCCCC--cceEEEecH
Confidence 3 999999999998754 589999999999999999987543211 00000 0000000 0000 011244689
Q ss_pred HHHHHHHHhCCCCeeeEEEcc
Q 025363 232 QEFKQLGFFAGFPHLRLYRVL 252 (254)
Q Consensus 232 ~e~~~ll~~aGf~~~~~~~~~ 252 (254)
++|.++++++||+++++..+.
T Consensus 166 ~~~~~~l~~~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 166 NEMLRMFLKAGYSISKVDRVY 186 (230)
T ss_dssp HHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEecc
Confidence 999999999999999887653
No 68
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.67 E-value=2.1e-16 Score=123.23 Aligned_cols=143 Identities=14% Similarity=0.058 Sum_probs=109.9
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC-CCCc
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IPAA 157 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~-~p~~ 157 (254)
+.+++.++ ..+..+|||||||+|.++..+++. +.+ ++++|. +.+++.+++. ++++++.+|+.+. .+..
T Consensus 22 ~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 97 (199)
T 2xvm_A 22 SEVLEAVK-VVKPGKTLDLGCGNGRNSLYLAAN--GYD-VDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQ 97 (199)
T ss_dssp HHHHHHTT-TSCSCEEEEETCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCC
T ss_pred HHHHHHhh-ccCCCeEEEEcCCCCHHHHHHHHC--CCe-EEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCC
Confidence 34555553 556789999999999999999988 557 999999 8888877643 4799999999775 4333
Q ss_pred -cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHH
Q 025363 158 -DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQ 236 (254)
Q Consensus 158 -D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 236 (254)
|+|++..++|++++++...++++++++|||||++++.+.........+ ......++.+++.+
T Consensus 98 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~ 160 (199)
T 2xvm_A 98 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCT-----------------VGFPFAFKEGELRR 160 (199)
T ss_dssp EEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCC-----------------SCCSCCBCTTHHHH
T ss_pred ceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCC-----------------CCCCCccCHHHHHH
Confidence 999999999999877889999999999999999998887654331100 00122357889999
Q ss_pred HHHhCCCCeeeEEEc
Q 025363 237 LGFFAGFPHLRLYRV 251 (254)
Q Consensus 237 ll~~aGf~~~~~~~~ 251 (254)
++++ |++++....
T Consensus 161 ~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 161 YYEG--WERVKYNED 173 (199)
T ss_dssp HTTT--SEEEEEECC
T ss_pred HhcC--CeEEEeccc
Confidence 9986 988876543
No 69
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.65 E-value=5e-16 Score=120.45 Aligned_cols=133 Identities=17% Similarity=0.164 Sum_probs=107.5
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCC-CCC-c-cEE
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPA-A-DAI 160 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~-~p~-~-D~v 160 (254)
..++..+ .+++.+|||||||+|.++..+++. +.+ ++++|. +.+++.+++. ++++++.+|+.+. ++. . |+|
T Consensus 37 ~~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i 111 (195)
T 3cgg_A 37 ARLIDAM--APRGAKILDAGCGQGRIGGYLSKQ--GHD-VLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLI 111 (195)
T ss_dssp HHHHHHH--SCTTCEEEEETCTTTHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEE
T ss_pred HHHHHHh--ccCCCeEEEECCCCCHHHHHHHHC--CCc-EEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEE
Confidence 3455555 356789999999999999999988 457 999999 8888777654 6799999999875 443 3 999
Q ss_pred Eec-cccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHH
Q 025363 161 FMK-WVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGF 239 (254)
Q Consensus 161 ~~~-~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 239 (254)
++. .++|++++++...+|++++++|+|||++++..... ..++.+++.++++
T Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~----------------------------~~~~~~~~~~~l~ 163 (195)
T 3cgg_A 112 VSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG----------------------------RGWVFGDFLEVAE 163 (195)
T ss_dssp EECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT----------------------------SSCCHHHHHHHHH
T ss_pred EECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC----------------------------CCcCHHHHHHHHH
Confidence 998 89999988888999999999999999999854311 1157788999999
Q ss_pred hCCCCeeeEEEc
Q 025363 240 FAGFPHLRLYRV 251 (254)
Q Consensus 240 ~aGf~~~~~~~~ 251 (254)
++||++++....
T Consensus 164 ~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 164 RVGLELENAFES 175 (195)
T ss_dssp HHTEEEEEEESS
T ss_pred HcCCEEeeeecc
Confidence 999998877543
No 70
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.65 E-value=6.2e-17 Score=128.71 Aligned_cols=156 Identities=15% Similarity=0.027 Sum_probs=108.6
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-----CCC--cc
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-----IPA--AD 158 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-----~p~--~D 158 (254)
.+++.+. ..+..+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++..++.+..+|+.+. .+. .|
T Consensus 43 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 43 AILLAIL-GRQPERVLDLGCGEGWLLRALADR--GIE-AVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp HHHHHHH-HTCCSEEEEETCTTCHHHHHHHTT--TCE-EEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred HHHHHhh-cCCCCEEEEeCCCCCHHHHHHHHC--CCE-EEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCcc
Confidence 3444443 445689999999999999999988 557 999999 88998888777888888887654 222 39
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhh-c-ccchHhhhhccccCceecCHHHHHH
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRA-L-LEGDIFVMTIYRAKGNHRTEQEFKQ 236 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~t~~e~~~ 236 (254)
+|++..++| .. +...+|++++++|||||+|++.+............... . .+....... .......++.++|.+
T Consensus 119 ~v~~~~~l~-~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 194 (227)
T 3e8s_A 119 LICANFALL-HQ--DIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDW-QPMPWYFRTLASWLN 194 (227)
T ss_dssp EEEEESCCC-SS--CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCC-CCEEEEECCHHHHHH
T ss_pred EEEECchhh-hh--hHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCc-ccceEEEecHHHHHH
Confidence 999999999 53 44689999999999999999988755433211000000 0 000000000 000123469999999
Q ss_pred HHHhCCCCeeeEEE
Q 025363 237 LGFFAGFPHLRLYR 250 (254)
Q Consensus 237 ll~~aGf~~~~~~~ 250 (254)
+|+++||+++++..
T Consensus 195 ~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 195 ALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHTTEEEEEEEC
T ss_pred HHHHcCCeEEEEec
Confidence 99999999998764
No 71
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.65 E-value=5.3e-16 Score=126.10 Aligned_cols=97 Identities=14% Similarity=0.082 Sum_probs=83.9
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-CCCc--cEEEeccccccCCHH
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IPAA--DAIFMKWVLTTWTDD 172 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-~p~~--D~v~~~~vlh~~~~~ 172 (254)
...+|||||||+|.++..|++.+. + ++++|+ +.|++.+++.++|+++.+|+.+. ++++ |+|++..++|+++.
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~--~-v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~- 114 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFE--R-VHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDL- 114 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCS--E-EEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCH-
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCC--E-EEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhH-
Confidence 457899999999999999998853 5 999999 99999999889999999999875 6654 99999999998753
Q ss_pred HHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 173 ECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 173 ~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
.+++++++|+|||||+|++.....+
T Consensus 115 --~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 115 --DRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp --HHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred --HHHHHHHHHHcCCCCEEEEEECCCC
Confidence 4789999999999999999876443
No 72
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.65 E-value=1.7e-16 Score=124.87 Aligned_cols=149 Identities=10% Similarity=-0.029 Sum_probs=106.3
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC-CCC-c-cEEEeccc
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA-A-DAIFMKWV 165 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~-~p~-~-D~v~~~~v 165 (254)
..+..+|||+|||+|..+..++.. ++.+ ++++|. +.+++.+++. .+++++.+|+.+. ++. . |+|++..+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE-DGYK-TYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGT 98 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH-TTCE-EEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh-CCCE-EEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcCh
Confidence 455789999999999985555544 4567 999999 8888877643 5799999999875 443 3 99999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCC--hhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCC
Q 025363 166 LTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNE--SQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGF 243 (254)
Q Consensus 166 lh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 243 (254)
+|+++.++..+++++++++|||||++++.+...++.... ...... .+...... .......++.+++.++++++||
T Consensus 99 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~e~~~~~~~~g~ 175 (209)
T 2p8j_A 99 IFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEG--EFLQLERG-EKVIHSYVSLEEADKYFKDMKV 175 (209)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETT--EEEECC-C-CCEEEEEECHHHHHHTTTTSEE
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccc--cceeccCC-CceeEEecCHHHHHHHHhhcCc
Confidence 999988888999999999999999999998876543210 000000 00000000 0011245699999999999999
Q ss_pred CeeeE
Q 025363 244 PHLRL 248 (254)
Q Consensus 244 ~~~~~ 248 (254)
...+.
T Consensus 176 ~~~~~ 180 (209)
T 2p8j_A 176 LFKED 180 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 76554
No 73
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.64 E-value=8e-16 Score=123.71 Aligned_cols=95 Identities=25% Similarity=0.319 Sum_probs=79.9
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC-CCCc-cEEEecc-cc
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPAA-DAIFMKW-VL 166 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~-~p~~-D~v~~~~-vl 166 (254)
++..+|||||||+|.++..+++. .+ ++++|+ +.+++.+++. .+++++.+|+.+. .+.. |+|++.. ++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~---~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH---YE-VTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSL 107 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---SE-EEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGG
T ss_pred CCCCeEEEecCCCCHHHHHHhhC---Ce-EEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCch
Confidence 34689999999999999999887 56 999999 8888877653 5799999999775 4444 9999976 89
Q ss_pred ccC-CHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 167 TTW-TDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 167 h~~-~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
|++ +.++...+|++++++|+|||++++.
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 887 5677889999999999999999873
No 74
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.63 E-value=8.1e-16 Score=124.73 Aligned_cols=132 Identities=8% Similarity=-0.057 Sum_probs=101.8
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC-----------------------CCCcEEEeCCCC
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS-----------------------IPGVTHIGGDMF 151 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~-----------------------~~~i~~~~~d~~ 151 (254)
.++.+|||+|||+|..+..|+++ +.+ ++++|+ +.+++.+++ ..+|+++.+|++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~-V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHT-VVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCE-EEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCe-EEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 46789999999999999999987 457 999999 888876632 157999999998
Q ss_pred CC-CC--Cc-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCce
Q 025363 152 KS-IP--AA-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGN 227 (254)
Q Consensus 152 ~~-~p--~~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (254)
+. .+ +. |+|+...++|++++++...++++++++|||||++++.....+..... ....
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~-------------------g~~~ 204 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHA-------------------GPPF 204 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCC-------------------CSSC
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCC-------------------CCCC
Confidence 86 32 33 99999999999988888899999999999999997655443221000 0001
Q ss_pred ecCHHHHHHHHHhCCCCeeeEEE
Q 025363 228 HRTEQEFKQLGFFAGFPHLRLYR 250 (254)
Q Consensus 228 ~~t~~e~~~ll~~aGf~~~~~~~ 250 (254)
..+.+++.+++++ +|+++....
T Consensus 205 ~~~~~el~~~l~~-~f~v~~~~~ 226 (252)
T 2gb4_A 205 YVPSAELKRLFGT-KCSMQCLEE 226 (252)
T ss_dssp CCCHHHHHHHHTT-TEEEEEEEE
T ss_pred CCCHHHHHHHhhC-CeEEEEEec
Confidence 1578999999987 598877654
No 75
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.63 E-value=2.8e-16 Score=126.51 Aligned_cols=95 Identities=20% Similarity=0.163 Sum_probs=81.0
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC-CCCc-cEEEecc-ccc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPAA-DAIFMKW-VLT 167 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~-~p~~-D~v~~~~-vlh 167 (254)
+..+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. .+++++.+|+.+. .++. |+|++.. ++|
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~-~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKN-TWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTN 113 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSE-EEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCc-EEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCcccc
Confidence 5789999999999999999988 456 999999 8888877654 2799999999775 4443 9999998 999
Q ss_pred cCC-HHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 168 TWT-DDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 168 ~~~-~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
+++ +++..++|++++++|+|||++++.
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 984 467889999999999999999984
No 76
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.61 E-value=1.3e-15 Score=126.29 Aligned_cols=143 Identities=13% Similarity=-0.010 Sum_probs=94.5
Q ss_pred CCCCeEEEecCcccHHHHH----HHHHcCCCCeE--EEeec-hHHHhhCCCC-------CCcEE--EeCCCCCC------
Q 025363 96 KGVKRLVDVGGSAGDCLRM----ILQKHRFICEG--INFDL-PEVVAEAPSI-------PGVTH--IGGDMFKS------ 153 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~----l~~~~~~~~~~--~~~D~-~~~~~~~~~~-------~~i~~--~~~d~~~~------ 153 (254)
.++.+|||||||+|.++.. ++.++|+.+ + +++|. ++|++.+++. +++.+ ..++..+.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~-v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVC-INNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCE-EEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCce-eeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 4567999999999986654 445567774 4 99999 8888866532 34444 45554321
Q ss_pred -CCC--ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecC
Q 025363 154 -IPA--ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRT 230 (254)
Q Consensus 154 -~p~--~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 230 (254)
++. .|+|++.+++|+++|. .++|++++++|||||+|++.+.... ..+... ........-.......++
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~i~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~ 200 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDI--PATLKFFHSLLGTNAKMLIIVVSGS----SGWDKL---WKKYGSRFPQDDLCQYIT 200 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCH--HHHHHHHHHTEEEEEEEEEEEECTT----SHHHHH---HHHHGGGSCCCTTCCCCC
T ss_pred ccCCCceeEEEEeeeeeecCCH--HHHHHHHHHHcCCCcEEEEEEecCC----ccHHHH---HHHHHHhccCCCcccCCC
Confidence 123 3999999999999754 6899999999999999999864321 111110 000000000000123468
Q ss_pred HHHHHHHHHhCCCCeeeE
Q 025363 231 EQEFKQLGFFAGFPHLRL 248 (254)
Q Consensus 231 ~~e~~~ll~~aGf~~~~~ 248 (254)
.++|.++|+++||+++..
T Consensus 201 ~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 201 SDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHCCCceEEE
Confidence 999999999999998764
No 77
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.61 E-value=1.6e-15 Score=120.34 Aligned_cols=137 Identities=18% Similarity=0.160 Sum_probs=100.2
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-CCC-c-cEEEeccccccCCHHH
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IPA-A-DAIFMKWVLTTWTDDE 173 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-~p~-~-D~v~~~~vlh~~~~~~ 173 (254)
+.+|||||||+|.++..+++. +++|. +.+++.+++. +++++.+|+.+. .+. . |+|++..++|++++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-- 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTICFVDD-- 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSC--
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchHhhccC--
Confidence 789999999999999887654 66788 8888877765 799999998765 443 3 99999999999864
Q ss_pred HHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCCeeeEEEc
Q 025363 174 CKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 174 ~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
...+|++++++|+|||++++.+..... ....... .... ... .......++.++|.++|+++||+++++...
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~----~~~~~~~-~~~~-~~~-~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRES----FLGREYE-KNKE-KSV-FYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSS----HHHHHHH-HTTT-C-C-CSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCcc----HHHHHHH-HHhc-Ccc-hhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 468999999999999999998764321 1110000 0000 000 011234469999999999999999887765
No 78
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.61 E-value=1.8e-15 Score=125.77 Aligned_cols=120 Identities=18% Similarity=0.088 Sum_probs=93.9
Q ss_pred HHHHHHhcCCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCC--------CC
Q 025363 72 LMRKAMSGVSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPS--------IP 141 (254)
Q Consensus 72 ~~~~~m~~~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~--------~~ 141 (254)
.|.+....+.....+.+.... ..++.+|||||||+|..+..+++.+ +..+ ++++|+ +.+++.+++ ..
T Consensus 13 ~y~~~rp~y~~~~~~~l~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~ 89 (299)
T 3g5t_A 13 RYSSSRPSYPSDFYKMIDEYH--DGERKLLVDVGCGPGTATLQMAQELKPFEQ-IIGSDLSATMIKTAEVIKEGSPDTYK 89 (299)
T ss_dssp HHHHHSCCCCHHHHHHHHHHC--CSCCSEEEEETCTTTHHHHHHHHHSSCCSE-EEEEESCHHHHHHHHHHHHHCC-CCT
T ss_pred HHhhcCCCCCHHHHHHHHHHh--cCCCCEEEEECCCCCHHHHHHHHhCCCCCE-EEEEeCCHHHHHHHHHHHHhccCCCC
Confidence 444444444444444444443 3578899999999999999999987 7778 999999 888887754 36
Q ss_pred CcEEEeCCCCCC-CCC-------c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 142 GVTHIGGDMFKS-IPA-------A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 142 ~i~~~~~d~~~~-~p~-------~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
+++|+.+|+.+. .+. . |+|++..++|++ +...++++++++|||||+|++.+..
T Consensus 90 ~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 90 NVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp TEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 899999999875 333 3 999999999998 4578999999999999999995443
No 79
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.61 E-value=4.3e-16 Score=129.07 Aligned_cols=156 Identities=13% Similarity=0.059 Sum_probs=107.8
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC-C-CC-c-cEEEe
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-I-PA-A-DAIFM 162 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~-~-p~-~-D~v~~ 162 (254)
..++.+|||||||+|.++..+++. +..+ ++++|+ +.+++.+++. .+++++.+|+.+. + +. . |+|++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GIGE-YYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TCSE-EEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CCCE-EEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEE
Confidence 456789999999999999998776 4447 999999 8888776643 3689999999875 4 33 3 99999
Q ss_pred cccccc--CCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCC---------CChhh--------hh--hcccchHhhhh-
Q 025363 163 KWVLTT--WTDDECKLIMENCYKALPAGGKLIACEPVLPDDS---------NESQR--------TR--ALLEGDIFVMT- 220 (254)
Q Consensus 163 ~~vlh~--~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~---------~~~~~--------~~--~~~~~~~~~~~- 220 (254)
..++|+ .+.++..++|++++++|||||+|++..+...... ..... .. ......+....
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 219 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDS 219 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTS
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchh
Confidence 999998 5677889999999999999999999775421100 00000 00 00000000000
Q ss_pred ccccCceecCHHHHHHHHHhCCCCeeeEEEcc
Q 025363 221 IYRAKGNHRTEQEFKQLGFFAGFPHLRLYRVL 252 (254)
Q Consensus 221 ~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 252 (254)
+.......++.+++.++++++||+++++..+.
T Consensus 220 ~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 220 VNNCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp CSSEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred hcCCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 00001234589999999999999999887653
No 80
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.60 E-value=4.9e-15 Score=117.10 Aligned_cols=122 Identities=16% Similarity=0.096 Sum_probs=93.5
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeCCCCCC-CCC-c-cEEE
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKS-IPA-A-DAIF 161 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~-~p~-~-D~v~ 161 (254)
.+.+++.+....+..+|||||||+|.++..+. .+ ++++|+.+. ++++..+|+.+. ++. . |+|+
T Consensus 55 ~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-----~~-v~~~D~s~~--------~~~~~~~d~~~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 55 VDRIARDLRQRPASLVVADFGCGDCRLASSIR-----NP-VHCFDLASL--------DPRVTVCDMAQVPLEDESVDVAV 120 (215)
T ss_dssp HHHHHHHHHTSCTTSCEEEETCTTCHHHHHCC-----SC-EEEEESSCS--------STTEEESCTTSCSCCTTCEEEEE
T ss_pred HHHHHHHHhccCCCCeEEEECCcCCHHHHHhh-----cc-EEEEeCCCC--------CceEEEeccccCCCCCCCEeEEE
Confidence 34455555334567899999999999998773 46 999998332 678899998875 443 3 9999
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhC
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFA 241 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a 241 (254)
+..++|+ .+...+|++++++|+|||++++.+.... ..+.+++.++++++
T Consensus 121 ~~~~l~~---~~~~~~l~~~~~~L~~gG~l~i~~~~~~----------------------------~~~~~~~~~~l~~~ 169 (215)
T 2zfu_A 121 FCLSLMG---TNIRDFLEEANRVLKPGGLLKVAEVSSR----------------------------FEDVRTFLRAVTKL 169 (215)
T ss_dssp EESCCCS---SCHHHHHHHHHHHEEEEEEEEEEECGGG----------------------------CSCHHHHHHHHHHT
T ss_pred Eehhccc---cCHHHHHHHHHHhCCCCeEEEEEEcCCC----------------------------CCCHHHHHHHHHHC
Confidence 9999984 3457899999999999999999874210 12778999999999
Q ss_pred CCCeeeEEEc
Q 025363 242 GFPHLRLYRV 251 (254)
Q Consensus 242 Gf~~~~~~~~ 251 (254)
||++++....
T Consensus 170 Gf~~~~~~~~ 179 (215)
T 2zfu_A 170 GFKIVSKDLT 179 (215)
T ss_dssp TEEEEEEECC
T ss_pred CCEEEEEecC
Confidence 9998876544
No 81
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.60 E-value=1.5e-14 Score=113.42 Aligned_cols=104 Identities=11% Similarity=0.049 Sum_probs=86.8
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCC---
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP--- 155 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p--- 155 (254)
..++..++ ..++.+|||||||+|.++..+++..|..+ ++++|. +.+++.++++ ++++++.+|+.+..+
T Consensus 30 ~~~l~~l~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 30 AVTLSKLR-LQDDLVMWDIGAGSASVSIEASNLMPNGR-IFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp HHHHHHTT-CCTTCEEEEETCTTCHHHHHHHHHCTTSE-EEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSC
T ss_pred HHHHHHcC-CCCCCEEEEECCCCCHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCC
Confidence 44566663 77889999999999999999999998888 999999 8888887653 679999999977643
Q ss_pred CccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 156 AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 156 ~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
..|+|++...++ +..++++++.++|||||++++...
T Consensus 108 ~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 108 DPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp CCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEec
Confidence 249999988776 345899999999999999998543
No 82
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.59 E-value=5.9e-15 Score=117.49 Aligned_cols=135 Identities=12% Similarity=0.109 Sum_probs=96.5
Q ss_pred CCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCC----CCCCcEEEeCCCCCC--CC---Cc-cEEE
Q 025363 94 GFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAP----SIPGVTHIGGDMFKS--IP---AA-DAIF 161 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~----~~~~i~~~~~d~~~~--~p---~~-D~v~ 161 (254)
+.+++.+|||+|||+|.++..+++.. |..+ ++++|. ++|++.++ +.+++..+.+|...+ .+ +. |+|+
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~-V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf 152 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGR-IYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLY 152 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCE-EEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCce-EEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEE
Confidence 58899999999999999999999985 7778 999999 88876553 347899999988765 22 22 8877
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhC
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFA 241 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a 241 (254)
+... |. ++...+++++++.|||||++++.......+ .. .... ....+..+.|+++
T Consensus 153 ~d~~-~~---~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d--------------~~------~p~~-~~~~~ev~~L~~~ 207 (233)
T 4df3_A 153 ADVA-QP---EQAAIVVRNARFFLRDGGYMLMAIKARSID--------------VT------TEPS-EVYKREIKTLMDG 207 (233)
T ss_dssp ECCC-CT---THHHHHHHHHHHHEEEEEEEEEEEECCHHH--------------HH------TCCC-HHHHHHHHHHHHT
T ss_pred Eecc-CC---hhHHHHHHHHHHhccCCCEEEEEEecccCC--------------CC------CChH-HHHHHHHHHHHHC
Confidence 5432 22 355689999999999999999865322111 00 0000 1123345678999
Q ss_pred CCCeeeEEEccCC
Q 025363 242 GFPHLRLYRVLDY 254 (254)
Q Consensus 242 Gf~~~~~~~~~~~ 254 (254)
||+.++...+..|
T Consensus 208 GF~l~e~i~L~pf 220 (233)
T 4df3_A 208 GLEIKDVVHLDPF 220 (233)
T ss_dssp TCCEEEEEECTTT
T ss_pred CCEEEEEEccCCC
Confidence 9999998877654
No 83
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.58 E-value=1.3e-14 Score=113.45 Aligned_cols=133 Identities=11% Similarity=0.018 Sum_probs=100.3
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC-CCC--ccEEEeccccc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA--ADAIFMKWVLT 167 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~-~p~--~D~v~~~~vlh 167 (254)
++ +|||||||+|.++..+++. +.+ ++++|. +.+++.+++. .++.+..+|+.+. ++. .|+|++. +.
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~ 103 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL--GYE-VTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FC 103 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT--TCE-EEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CC
T ss_pred CC-CEEEECCCCCHhHHHHHhC--CCe-EEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hh
Confidence 45 9999999999999999987 457 999999 8888877653 3799999999876 443 3999984 34
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCCeee
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHLR 247 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 247 (254)
+++.++...+|++++++|||||++++.+....... ..... .......++.+++.++++ ||++++
T Consensus 104 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~---------~~~~~-----~~~~~~~~~~~~l~~~l~--Gf~v~~ 167 (202)
T 2kw5_A 104 HLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQ---------YNTGG-----PKDLDLLPKLETLQSELP--SLNWLI 167 (202)
T ss_dssp CCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGG---------GTSCC-----SSSGGGCCCHHHHHHHCS--SSCEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEEecccccc---------CCCCC-----CCcceeecCHHHHHHHhc--CceEEE
Confidence 55777889999999999999999999887543210 00000 000123469999999999 999988
Q ss_pred EEEc
Q 025363 248 LYRV 251 (254)
Q Consensus 248 ~~~~ 251 (254)
+...
T Consensus 168 ~~~~ 171 (202)
T 2kw5_A 168 ANNL 171 (202)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 84
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.57 E-value=4.3e-15 Score=122.60 Aligned_cols=142 Identities=15% Similarity=0.085 Sum_probs=106.6
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC-CCCc-
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPAA- 157 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~-~p~~- 157 (254)
..+++.++ ..++.+|||||||+|.++..+++. +.+ ++++|. +.+++.+++. .++++..+|+.+. .++.
T Consensus 110 ~~~~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~--g~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~f 185 (286)
T 3m70_A 110 GDVVDAAK-IISPCKVLDLGCGQGRNSLYLSLL--GYD-VTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENY 185 (286)
T ss_dssp HHHHHHHH-HSCSCEEEEESCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCE
T ss_pred HHHHHHhh-ccCCCcEEEECCCCCHHHHHHHHC--CCe-EEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCc
Confidence 34455553 446889999999999999999988 457 999999 8888876653 2799999999876 3333
Q ss_pred cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHH
Q 025363 158 DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQL 237 (254)
Q Consensus 158 D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 237 (254)
|+|++..++|+++++....++++++++|+|||++++......+....+ ......++.+++.++
T Consensus 186 D~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~~ 248 (286)
T 3m70_A 186 DFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCP-----------------LPFSFTFAENELKEY 248 (286)
T ss_dssp EEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCS-----------------SCCSCCBCTTHHHHH
T ss_pred cEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCC-----------------CCccccCCHHHHHHH
Confidence 999999999999988889999999999999999888766544321110 001123567788888
Q ss_pred HHhCCCCeeeEEE
Q 025363 238 GFFAGFPHLRLYR 250 (254)
Q Consensus 238 l~~aGf~~~~~~~ 250 (254)
++. |+++....
T Consensus 249 ~~~--~~~~~~~~ 259 (286)
T 3m70_A 249 YKD--WEFLEYNE 259 (286)
T ss_dssp TTT--SEEEEEEC
T ss_pred hcC--CEEEEEEc
Confidence 854 87776643
No 85
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.57 E-value=4.7e-16 Score=127.02 Aligned_cols=140 Identities=16% Similarity=0.049 Sum_probs=98.4
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---------------------------------
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--------------------------------- 140 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--------------------------------- 140 (254)
..++.+|||||||+|.++..++.... .+ ++++|+ +.+++.+++.
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~-~~-v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSF-QD-ITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTE-EE-EEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhh-cc-eeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 45678999999999988766554421 25 899999 8888865431
Q ss_pred --CCcE-EEeCCCCCCCC-----C--ccEEEeccccccCC--HHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhh
Q 025363 141 --PGVT-HIGGDMFKSIP-----A--ADAIFMKWVLTTWT--DDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRT 208 (254)
Q Consensus 141 --~~i~-~~~~d~~~~~p-----~--~D~v~~~~vlh~~~--~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~ 208 (254)
.+|. ++.+|+.+..| . .|+|++..+||+.. .++..++|++++++|||||+|++.+......
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~------- 203 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPS------- 203 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE-------
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcc-------
Confidence 1233 88999988421 2 39999999999742 3567889999999999999999987542210
Q ss_pred hhcccchHhhhhccccCceecCHHHHHHHHHhCCCCeeeEEEc
Q 025363 209 RALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
....- .......++.+++.++|+++||+++++...
T Consensus 204 ---~~~g~-----~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 204 ---YMVGK-----REFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp ---EEETT-----EEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ---ceeCC-----eEeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 00000 000112358999999999999999887653
No 86
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.57 E-value=2e-15 Score=131.12 Aligned_cols=151 Identities=17% Similarity=0.171 Sum_probs=108.5
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC----C--C-
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS----I--P- 155 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~----~--p- 155 (254)
..+.+++.+. ..++.+|||||||+|.++..++++ +.+ ++++|+ +.+++.+++. .+......+... + +
T Consensus 95 ~~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~l~~~--g~~-v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~~~ 169 (416)
T 4e2x_A 95 LARDFLATEL-TGPDPFIVEIGCNDGIMLRTIQEA--GVR-HLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRRTE 169 (416)
T ss_dssp HHHHHHHTTT-CSSSCEEEEETCTTTTTHHHHHHT--TCE-EEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHHc--CCc-EEEECCCHHHHHHHHHc-CCCcceeeechhhHhhcccCC
Confidence 5666777774 778899999999999999999987 346 999999 8888888765 344333222111 1 1
Q ss_pred C-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHH
Q 025363 156 A-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEF 234 (254)
Q Consensus 156 ~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~ 234 (254)
+ .|+|++.+++||++ +...+|++++++|||||++++........ ... ..++. . .......++.+++
T Consensus 170 ~~fD~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~------~~~-~~~~~--~--~~~~~~~~s~~~l 236 (416)
T 4e2x_A 170 GPANVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDPYLGDI------VAK-TSFDQ--I--FDEHFFLFSATSV 236 (416)
T ss_dssp CCEEEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEECHHHH------HHH-TCGGG--C--STTCCEECCHHHH
T ss_pred CCEEEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeCChHHh------hhh-cchhh--h--hhhhhhcCCHHHH
Confidence 2 39999999999996 45799999999999999999975533210 000 00110 0 0122345799999
Q ss_pred HHHHHhCCCCeeeEEEcc
Q 025363 235 KQLGFFAGFPHLRLYRVL 252 (254)
Q Consensus 235 ~~ll~~aGf~~~~~~~~~ 252 (254)
.++++++||+++++..++
T Consensus 237 ~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 237 QGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHcCCEEEEEEEcc
Confidence 999999999999988765
No 87
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.57 E-value=1.1e-15 Score=124.42 Aligned_cols=141 Identities=12% Similarity=0.023 Sum_probs=103.5
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---C-----------------------------
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---P----------------------------- 141 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---~----------------------------- 141 (254)
..++.+|||||||+|.++..+++..+ .+ ++++|+ +.+++.+++. .
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~~-~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACESF-TE-IIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGTE-EE-EEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhccc-Ce-EEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 34578999999999999998887755 46 999999 8888776432 1
Q ss_pred ---Cc-EEEeCCCCCC-C-C----Cc-cEEEeccccccCCH--HHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhh
Q 025363 142 ---GV-THIGGDMFKS-I-P----AA-DAIFMKWVLTTWTD--DECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRT 208 (254)
Q Consensus 142 ---~i-~~~~~d~~~~-~-p----~~-D~v~~~~vlh~~~~--~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~ 208 (254)
++ .++.+|+.+. . + .. |+|++..++|++++ ++...+|++++++|||||+|++.+......
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~------- 204 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSY------- 204 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE-------
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCce-------
Confidence 17 8999999875 2 2 23 99999999994432 467899999999999999999988532210
Q ss_pred hhcccchHhhhhccccCceecCHHHHHHHHHhCCCCeeeEEEcc
Q 025363 209 RALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHLRLYRVL 252 (254)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 252 (254)
.... . ........+.+++.++|+++||+++++....
T Consensus 205 ---~~~~----~-~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 205 ---YMIG----E-QKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp ---EEET----T-EEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred ---EEcC----C-ccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 0000 0 0001123588999999999999999887643
No 88
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.56 E-value=1.2e-15 Score=126.14 Aligned_cols=138 Identities=14% Similarity=0.101 Sum_probs=96.0
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-C---------------------------------
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-P--------------------------------- 141 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~--------------------------------- 141 (254)
++.+|||||||+|.++ .++...+..+ ++++|+ +.+++.+++. .
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSACSHFED-ITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGGGGCSE-EEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHH-HHhhccCCCe-EEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 5789999999999944 3444434557 999999 8888765431 0
Q ss_pred --CcEEEeCCCCCCC-------CC--ccEEEeccccccCCH--HHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhh
Q 025363 142 --GVTHIGGDMFKSI-------PA--ADAIFMKWVLTTWTD--DECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRT 208 (254)
Q Consensus 142 --~i~~~~~d~~~~~-------p~--~D~v~~~~vlh~~~~--~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~ 208 (254)
.+.++.+|+.+.. +. .|+|++..+||++++ ++..++|++++++|||||+|++.+......
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~------- 221 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESW------- 221 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCE-------
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcce-------
Confidence 1456667887631 22 399999999998543 367899999999999999999986432110
Q ss_pred hhcccchHhhhhccccCceecCHHHHHHHHHhCCCCeeeEEEc
Q 025363 209 RALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
.... . .......++.++|.++|+++||+++++...
T Consensus 222 ---~~~~----~-~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 222 ---YLAG----E-ARLTVVPVSEEEVREALVRSGYKVRDLRTY 256 (289)
T ss_dssp ---EEET----T-EEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ---EEcC----C-eeeeeccCCHHHHHHHHHHcCCeEEEeeEe
Confidence 0000 0 000112358999999999999999887654
No 89
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.56 E-value=3.4e-15 Score=123.55 Aligned_cols=108 Identities=17% Similarity=0.163 Sum_probs=86.8
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----------CCcEEEeCCCCCC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----------PGVTHIGGDMFKS 153 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----------~~i~~~~~d~~~~ 153 (254)
.+.+.+.++ ..+..+|||||||+|.++..+++.. .+ ++++|+ +.+++.+++. .++.+..+|+.+.
T Consensus 46 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~--~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 121 (293)
T 3thr_A 46 KAWLLGLLR-QHGCHRVLDVACGTGVDSIMLVEEG--FS-VTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTL 121 (293)
T ss_dssp HHHHHHHHH-HTTCCEEEETTCTTSHHHHHHHHTT--CE-EEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGH
T ss_pred HHHHHHHhc-ccCCCEEEEecCCCCHHHHHHHHCC--Ce-EEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhC
Confidence 344444443 4567899999999999999999984 46 999999 8888877531 5788999998763
Q ss_pred ----CCC-c-cEEEec-cccccCCH-----HHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 154 ----IPA-A-DAIFMK-WVLTTWTD-----DECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 154 ----~p~-~-D~v~~~-~vlh~~~~-----~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
++. . |+|++. +++|++++ ++..++|++++++|||||+|++...
T Consensus 122 ~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 122 DKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 233 3 999998 89999988 7789999999999999999998754
No 90
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.55 E-value=4.3e-14 Score=107.77 Aligned_cols=117 Identities=18% Similarity=0.146 Sum_probs=94.1
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCC-c-cEEEeccccccCCHH
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPA-A-DAIFMKWVLTTWTDD 172 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~-~-D~v~~~~vlh~~~~~ 172 (254)
.++.+|||+|||+|.++..++++. + ++++|+ +.+++. .++++++.+|+.++.+. . |+|+++..+|..++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~-v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---T-VVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---E-EEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---c-EEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEECCCCccCCcc
Confidence 346699999999999999999886 6 999999 888877 46899999999987553 3 999998888854433
Q ss_pred -------HHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCCe
Q 025363 173 -------ECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPH 245 (254)
Q Consensus 173 -------~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 245 (254)
+...+++++.+.+ |||++++.+... .+.+++.++++++||+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~------------------------------~~~~~l~~~l~~~gf~~ 143 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA------------------------------NRPKEVLARLEERGYGT 143 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG------------------------------GCHHHHHHHHHHTTCEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecC------------------------------CCHHHHHHHHHHCCCcE
Confidence 3467889999999 999999866321 24567889999999998
Q ss_pred eeEEE
Q 025363 246 LRLYR 250 (254)
Q Consensus 246 ~~~~~ 250 (254)
..+..
T Consensus 144 ~~~~~ 148 (170)
T 3q87_B 144 RILKV 148 (170)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77654
No 91
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.54 E-value=4.8e-14 Score=112.74 Aligned_cols=137 Identities=15% Similarity=0.149 Sum_probs=96.9
Q ss_pred HhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhC----CCCCCcEEEeCCCCC----C-CCCc-
Q 025363 89 LEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEA----PSIPGVTHIGGDMFK----S-IPAA- 157 (254)
Q Consensus 89 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~----~~~~~i~~~~~d~~~----~-~p~~- 157 (254)
++.+ ...++.+|||+|||+|..+..+++.++..+ ++++|. +.+++.+ +..+++.++.+|+.+ . ++..
T Consensus 67 l~~~-~~~~~~~VLDlGcG~G~~~~~la~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 144 (230)
T 1fbn_A 67 LKVM-PIKRDSKILYLGASAGTTPSHVADIADKGI-VYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKV 144 (230)
T ss_dssp CCCC-CCCTTCEEEEESCCSSHHHHHHHHHTTTSE-EEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCE
T ss_pred cccc-CCCCCCEEEEEcccCCHHHHHHHHHcCCcE-EEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccE
Confidence 3444 366788999999999999999999988667 999999 8777543 334789999999987 3 3333
Q ss_pred cEEEeccccccCCH-HHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHH
Q 025363 158 DAIFMKWVLTTWTD-DECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQ 236 (254)
Q Consensus 158 D~v~~~~vlh~~~~-~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 236 (254)
|+|+ |++++ .....+++++++.|||||++++. ..........+ . .....+++.
T Consensus 145 D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~~~---------~----------~~~~~~~l~- 198 (230)
T 1fbn_A 145 DVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVTKD---------P----------KEIFKEQKE- 198 (230)
T ss_dssp EEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSSSC---------H----------HHHHHHHHH-
T ss_pred EEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCCCC---------H----------HHhhHHHHH-
Confidence 9988 44433 34467799999999999999996 21111100000 0 011236777
Q ss_pred HHHhCCCCeeeEEEccC
Q 025363 237 LGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 237 ll~~aGf~~~~~~~~~~ 253 (254)
+|+++||+.++...+..
T Consensus 199 ~l~~~Gf~~~~~~~~~~ 215 (230)
T 1fbn_A 199 ILEAGGFKIVDEVDIEP 215 (230)
T ss_dssp HHHHHTEEEEEEEECTT
T ss_pred HHHHCCCEEEEEEccCC
Confidence 89999999988877643
No 92
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.54 E-value=3.4e-14 Score=115.29 Aligned_cols=141 Identities=17% Similarity=0.195 Sum_probs=100.0
Q ss_pred CCCeEEEecCcc--cHHHHHHH-HHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCC-----C---C-c
Q 025363 97 GVKRLVDVGGSA--GDCLRMIL-QKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSI-----P---A-A 157 (254)
Q Consensus 97 ~~~~vlDvG~G~--G~~~~~l~-~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~-----p---~-~ 157 (254)
+..+|||||||+ +..+..++ +..|+.+ ++.+|. |.|++.++.. .+++|+.+|+.+.. | . .
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~ar-Vv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESR-VVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCE-EEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCE-EEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccccc
Confidence 457999999997 33445554 4579988 999999 9999988753 36999999998741 1 1 1
Q ss_pred c-----EEEeccccccCCHHH-HHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCH
Q 025363 158 D-----AIFMKWVLTTWTDDE-CKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTE 231 (254)
Q Consensus 158 D-----~v~~~~vlh~~~~~~-~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 231 (254)
| +|++..+||++++++ ...+|++++++|+|||+|++.+...+.. +..... ........ ......||.
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~---p~~~~~--~~~~~~~~--g~p~~~rs~ 229 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFA---PQEVGR--VAREYAAR--NMPMRLRTH 229 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTS---HHHHHH--HHHHHHHT--TCCCCCCCH
T ss_pred CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCC---HHHHHH--HHHHHHhc--CCCCccCCH
Confidence 3 688999999999865 6899999999999999999998765422 111110 11111111 112355899
Q ss_pred HHHHHHHHhCCCCeee
Q 025363 232 QEFKQLGFFAGFPHLR 247 (254)
Q Consensus 232 ~e~~~ll~~aGf~~~~ 247 (254)
+|+.++|. ||++++
T Consensus 230 ~ei~~~f~--Glelve 243 (277)
T 3giw_A 230 AEAEEFFE--GLELVE 243 (277)
T ss_dssp HHHHHTTT--TSEECT
T ss_pred HHHHHHhC--CCcccC
Confidence 99999994 998654
No 93
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.54 E-value=2.4e-14 Score=121.88 Aligned_cols=113 Identities=13% Similarity=0.221 Sum_probs=91.6
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC---------------CCCcEEEeC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS---------------IPGVTHIGG 148 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~---------------~~~i~~~~~ 148 (254)
+..+++.+. ..++.+|||||||+|..+..++...+..+ ++++|+ +.+++.+++ ..+|+|+.+
T Consensus 162 i~~il~~l~-l~~gd~VLDLGCGtG~l~l~lA~~~g~~k-VvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 162 VAQMIDEIK-MTDDDLFVDLGSGVGQVVLQVAAATNCKH-HYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHHHHHHC-CCTTCEEEEESCTTSHHHHHHHHHCCCSE-EEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 556777774 78899999999999999999999887667 999999 766655542 257999999
Q ss_pred CCCCC-CC----CccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCC
Q 025363 149 DMFKS-IP----AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDS 202 (254)
Q Consensus 149 d~~~~-~p----~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~ 202 (254)
|+++. ++ .+|+|+++.+++ + .+..+.|+++++.|||||+|++.|...++..
T Consensus 240 D~~~lp~~d~~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 240 DFLSEEWRERIANTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAPLNF 295 (438)
T ss_dssp CTTSHHHHHHHHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSCTTC
T ss_pred cccCCccccccCCccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccCCCC
Confidence 99886 42 359999987764 2 4567888999999999999999999887653
No 94
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.54 E-value=9.6e-15 Score=115.46 Aligned_cols=99 Identities=20% Similarity=0.252 Sum_probs=84.3
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCCCCC-c-cEEEeccccc
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKSIPA-A-DAIFMKWVLT 167 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~~p~-~-D~v~~~~vlh 167 (254)
..+..+|||||||+|.++..+++.. .+ ++++|+ +.+++.+++. ++++++.+|+.+..+. . |+|++..++|
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KR-LTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLY 125 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EE-EEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGG
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CE-EEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHH
Confidence 5667899999999999999999885 35 999999 8888776543 5799999999887543 3 9999999999
Q ss_pred cCCH-HHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 168 TWTD-DECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 168 ~~~~-~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
++++ ++..++|++++++|||||++++...
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 9985 5667899999999999999999764
No 95
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.53 E-value=3.7e-14 Score=112.30 Aligned_cols=142 Identities=8% Similarity=0.022 Sum_probs=94.3
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhh----CCC------CCCcEEEeCCCCCC-CCCc-cEEE
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAE----APS------IPGVTHIGGDMFKS-IPAA-DAIF 161 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~----~~~------~~~i~~~~~d~~~~-~p~~-D~v~ 161 (254)
..++.+|||||||+|.++..+++.+|+.+ ++++|+ +.+++. +++ .++++++.+|+.+. .+.. |.|+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~-v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRL-VVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEE-EEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEE
Confidence 56688999999999999999999999989 999999 876664 222 15899999999875 3332 6665
Q ss_pred ecc---cc--ccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHH
Q 025363 162 MKW---VL--TTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQ 236 (254)
Q Consensus 162 ~~~---vl--h~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 236 (254)
+.. .+ |++++ ...+|++++++|||||++++......-....+ .+... .........+++..
T Consensus 104 ~~~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~---------~~~~~---~~~~~~~~~~~l~~ 169 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGS--SPEMLRGMAAVCRPGASFLVALNLHAWRPSVP---------EVGEH---PEPTPDSADEWLAP 169 (218)
T ss_dssp EESCCHHHHHHHHTS--SSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCG---------GGTTC---CCCCHHHHHHHHHH
T ss_pred EEccchhhhhhhhcc--HHHHHHHHHHHcCCCcEEEEEecccccccccc---------ccccC---CccchHHHHHHHHH
Confidence 322 11 12222 26899999999999999998432211110000 00000 00011223456888
Q ss_pred HHHhCCCCeeeEEEc
Q 025363 237 LGFFAGFPHLRLYRV 251 (254)
Q Consensus 237 ll~~aGf~~~~~~~~ 251 (254)
+++++||++.++..+
T Consensus 170 ~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 170 RYAEAGWKLADCRYL 184 (218)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHcCCCceeeecc
Confidence 999999999887654
No 96
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.53 E-value=2e-14 Score=114.62 Aligned_cols=144 Identities=10% Similarity=0.012 Sum_probs=90.7
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec--hHHHhhC---CCC------CCcEEEeCCCCCCCCC--ccEEEe
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL--PEVVAEA---PSI------PGVTHIGGDMFKSIPA--ADAIFM 162 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~--~~~~~~~---~~~------~~i~~~~~d~~~~~p~--~D~v~~ 162 (254)
.++.+|||||||+|.++..++++.|+.+ ++++|+ +.|++.+ +++ +++.|+.+|+.+. |. .|.|.+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~-v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l-~~~~~d~v~~ 100 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTF-YIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL-PFELKNIADS 100 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEE-EEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC-CGGGTTCEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh-hhhccCeEEE
Confidence 4678999999999999999999888888 999998 3454443 443 5799999998765 43 255554
Q ss_pred ccccccCCHH------HHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHH
Q 025363 163 KWVLTTWTDD------ECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQ 236 (254)
Q Consensus 163 ~~vlh~~~~~------~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 236 (254)
..+...|+.. ....+|++++++|||||++++...........+.. .. .. . .........+++.+
T Consensus 101 i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~---~~--~~---~--~~~~~~~~~~el~~ 170 (225)
T 3p2e_A 101 ISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIK---KR--GL---P--LLSKAYFLSEQYKA 170 (225)
T ss_dssp EEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC------------------------CCHHHHHSHHHHH
T ss_pred EEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhh---hc--CC---C--CCChhhcchHHHHH
Confidence 4444334321 11368999999999999999944332221000000 00 00 0 00001112235999
Q ss_pred HHHhCCCCeeeEEEc
Q 025363 237 LGFFAGFPHLRLYRV 251 (254)
Q Consensus 237 ll~~aGf~~~~~~~~ 251 (254)
+++++||++.++...
T Consensus 171 ~l~~aGf~v~~~~~~ 185 (225)
T 3p2e_A 171 ELSNSGFRIDDVKEL 185 (225)
T ss_dssp HHHHHTCEEEEEEEE
T ss_pred HHHHcCCCeeeeeec
Confidence 999999998887654
No 97
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.52 E-value=7.6e-14 Score=114.14 Aligned_cols=97 Identities=21% Similarity=0.191 Sum_probs=80.9
Q ss_pred CCCeEEEecCcccH----HHHHHHHHcC----CCCeEEEeec-hHHHhhCCCC---------------------------
Q 025363 97 GVKRLVDVGGSAGD----CLRMILQKHR----FICEGINFDL-PEVVAEAPSI--------------------------- 140 (254)
Q Consensus 97 ~~~~vlDvG~G~G~----~~~~l~~~~~----~~~~~~~~D~-~~~~~~~~~~--------------------------- 140 (254)
+..+|+|+|||||. .++.+++..+ +.+ +++.|+ +.+++.|++.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~-I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~ 183 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWK-VFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHE 183 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEE-EEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSC
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeE-EEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCC
Confidence 35799999999998 5666667655 357 999999 8898877542
Q ss_pred ----------CCcEEEeCCCCCC-CC--Cc-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 141 ----------PGVTHIGGDMFKS-IP--AA-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 141 ----------~~i~~~~~d~~~~-~p--~~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
.+|.|..+|+.++ ++ +. |+|+|++++++++++...+++++++++|+|||+|++.
T Consensus 184 ~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 184 GLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp SEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 2689999999985 54 33 9999999999999888899999999999999999883
No 98
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.52 E-value=2.6e-14 Score=109.34 Aligned_cols=101 Identities=22% Similarity=0.302 Sum_probs=82.4
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------C-CcEEEeCCCCCCCC---
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------P-GVTHIGGDMFKSIP--- 155 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~-~i~~~~~d~~~~~p--- 155 (254)
.+++.++ ..++.+|||+|||+|.++..+++.+|..+ ++++|+ +.+++.+++. + ++ ++.+|..+.++
T Consensus 16 ~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~ 92 (178)
T 3hm2_A 16 LAISALA-PKPHETLWDIGGGSGSIAIEWLRSTPQTT-AVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVP 92 (178)
T ss_dssp HHHHHHC-CCTTEEEEEESTTTTHHHHHHHTTSSSEE-EEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCC
T ss_pred HHHHHhc-ccCCCeEEEeCCCCCHHHHHHHHHCCCCe-EEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccC
Confidence 3455553 67788999999999999999999998888 999999 8888877642 3 78 88899877643
Q ss_pred C-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 156 A-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 156 ~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+ .|+|++...+|+ ..++++++++|||||++++.+.
T Consensus 93 ~~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp SCCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEee
Confidence 2 399999999986 4789999999999999998664
No 99
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.52 E-value=3e-14 Score=112.13 Aligned_cols=130 Identities=15% Similarity=0.097 Sum_probs=94.3
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCC-CeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCC-CCC-c-cEEEeccccccCC
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFI-CEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPA-A-DAIFMKWVLTTWT 170 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~-~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~-~p~-~-D~v~~~~vlh~~~ 170 (254)
++.+|||||||+|.++..+ +. + ++++|. +.+++.+++. ++++++.+|+.+. ++. . |+|++.+++|+++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQ-KVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSE-EEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCe-EEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC
Confidence 6789999999999999877 44 6 999999 8888877654 6899999999775 444 3 9999999999986
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCC
Q 025363 171 DDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAG 242 (254)
Q Consensus 171 ~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 242 (254)
+ ..++|++++++|||||++++.+..... .+.... ......-.. .....+.+|.+++.++++ |
T Consensus 110 ~--~~~~l~~~~~~L~pgG~l~i~~~~~~~----~~~~~~-~~~~~~~~~-~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 110 D--VERVLLEARRVLRPGGALVVGVLEALS----PWAALY-RRLGEKGVL-PWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp C--HHHHHHHHHHHEEEEEEEEEEEECTTS----HHHHHH-HHHHHTTCT-TGGGCCCCCHHHHHHHHC--S
T ss_pred C--HHHHHHHHHHHcCCCCEEEEEecCCcC----cHHHHH-HHHhhccCc-cccccccCCHHHHHHHhc--C
Confidence 4 468999999999999999998764321 111100 000000000 011234579999999998 7
No 100
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=2.7e-15 Score=120.53 Aligned_cols=134 Identities=14% Similarity=0.060 Sum_probs=91.1
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC---CCCc--cEEEe--
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS---IPAA--DAIFM-- 162 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~---~p~~--D~v~~-- 162 (254)
.++.+|||||||+|..+..+++..|. + ++++|+ |.+++.+++. .++.++.+|+.+. ++.. |.|+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~-v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~ 136 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-E-HWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-E-EEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-E-EEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEee
Confidence 45789999999999999999887664 6 899999 9999887653 5688888886442 3432 77764
Q ss_pred ---ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHH
Q 025363 163 ---KWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGF 239 (254)
Q Consensus 163 ---~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 239 (254)
...++++ .+...++++++|+|||||+|++.+...... .....++ .-.....+.+...|.
T Consensus 137 ~~~~~~~~~~--~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~-------~~~~~~~---------~~~~~~~~~~~~~L~ 198 (236)
T 3orh_A 137 YPLSEETWHT--HQFNFIKNHAFRLLKPGGVLTYCNLTSWGE-------LMKSKYS---------DITIMFEETQVPALL 198 (236)
T ss_dssp CCCBGGGTTT--HHHHHHHHTHHHHEEEEEEEEECCHHHHHH-------HTTTTCS---------CHHHHHHHHTHHHHH
T ss_pred eecccchhhh--cchhhhhhhhhheeCCCCEEEEEecCCchh-------hhhhhhh---------hhhhhhHHHHHHHHH
Confidence 4455555 556789999999999999998865322100 0000000 001122455667788
Q ss_pred hCCCCeeeEE
Q 025363 240 FAGFPHLRLY 249 (254)
Q Consensus 240 ~aGf~~~~~~ 249 (254)
++||++..+.
T Consensus 199 eaGF~~~~i~ 208 (236)
T 3orh_A 199 EAGFRRENIR 208 (236)
T ss_dssp HHTCCGGGEE
T ss_pred HcCCeEEEEE
Confidence 9999976553
No 101
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.49 E-value=1.3e-13 Score=113.21 Aligned_cols=132 Identities=18% Similarity=0.204 Sum_probs=101.0
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCC-C
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP-A 156 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p-~ 156 (254)
.+.+++.++ .+..+|||+|||+|..+..+++.+|+.+ ++++|+ +.+++.++++ ++++++.+|+++..+ .
T Consensus 99 ~~~~l~~~~--~~~~~vLDlG~GsG~~~~~la~~~~~~~-v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~ 175 (276)
T 2b3t_A 99 VEQALARLP--EQPCRILDLGTGTGAIALALASERPDCE-IIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQ 175 (276)
T ss_dssp HHHHHHHSC--SSCCEEEEETCTTSHHHHHHHHHCTTSE-EEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTC
T ss_pred HHHHHHhcc--cCCCEEEEecCCccHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccC
Confidence 344555542 4567999999999999999999999888 999999 8888877653 479999999988753 3
Q ss_pred c-cEEEecc-------------ccccCCH----------HHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcc
Q 025363 157 A-DAIFMKW-------------VLTTWTD----------DECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALL 212 (254)
Q Consensus 157 ~-D~v~~~~-------------vlh~~~~----------~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~ 212 (254)
. |+|++.. ++++.+. +....+++++++.|+|||++++...
T Consensus 176 ~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~---------------- 239 (276)
T 2b3t_A 176 QFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG---------------- 239 (276)
T ss_dssp CEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC----------------
T ss_pred CccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC----------------
Confidence 3 9999973 3333221 3457899999999999999988421
Q ss_pred cchHhhhhccccCceecCHHHHHHHHHhCCCCeeeEEE
Q 025363 213 EGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHLRLYR 250 (254)
Q Consensus 213 ~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 250 (254)
..+.+++.++++++||+.+++..
T Consensus 240 ---------------~~~~~~~~~~l~~~Gf~~v~~~~ 262 (276)
T 2b3t_A 240 ---------------WQQGEAVRQAFILAGYHDVETCR 262 (276)
T ss_dssp ---------------SSCHHHHHHHHHHTTCTTCCEEE
T ss_pred ---------------chHHHHHHHHHHHCCCcEEEEEe
Confidence 02456788999999998776653
No 102
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.49 E-value=2.6e-14 Score=112.10 Aligned_cols=120 Identities=13% Similarity=0.025 Sum_probs=95.7
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCCCc-cEEEecccc
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPAA-DAIFMKWVL 166 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p~~-D~v~~~~vl 166 (254)
..++.+|||||||+|.++..+++ .+..+ ++++|+ +.+++.++++ .++++..+|+.+..+.. |+|++...+
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~-~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHK-LGAKS-VLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHH-TTCSE-EEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHH-CCCCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcH
Confidence 34678999999999999999776 45567 999999 8888877653 34999999998765554 999998877
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCCee
Q 025363 167 TTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHL 246 (254)
Q Consensus 167 h~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 246 (254)
|+ ...++++++++|+|||++++.+... .+.+++.++++++||+.+
T Consensus 136 ~~-----~~~~l~~~~~~L~~gG~l~~~~~~~------------------------------~~~~~~~~~~~~~Gf~~~ 180 (205)
T 3grz_A 136 EI-----LLDLIPQLDSHLNEDGQVIFSGIDY------------------------------LQLPKIEQALAENSFQID 180 (205)
T ss_dssp HH-----HHHHGGGSGGGEEEEEEEEEEEEEG------------------------------GGHHHHHHHHHHTTEEEE
T ss_pred HH-----HHHHHHHHHHhcCCCCEEEEEecCc------------------------------ccHHHHHHHHHHcCCceE
Confidence 64 4688999999999999999965421 134567889999999988
Q ss_pred eEEEc
Q 025363 247 RLYRV 251 (254)
Q Consensus 247 ~~~~~ 251 (254)
++...
T Consensus 181 ~~~~~ 185 (205)
T 3grz_A 181 LKMRA 185 (205)
T ss_dssp EEEEE
T ss_pred Eeecc
Confidence 87654
No 103
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.48 E-value=1.1e-14 Score=116.96 Aligned_cols=100 Identities=17% Similarity=0.227 Sum_probs=77.9
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC---CCC--ccEEEe-c
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS---IPA--ADAIFM-K 163 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~---~p~--~D~v~~-~ 163 (254)
.++.+|||||||+|..+..+++..+ .+ ++++|+ +.+++.++++ .+++++.+|+.+. +++ .|+|++ .
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~-v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~ 136 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DE-HWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EE-EEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-Ce-EEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECC
Confidence 4578999999999999999966543 36 899999 8888777643 5689999998663 443 399998 5
Q ss_pred cc--cccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 164 WV--LTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 164 ~v--lh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
+. .+.+.......++++++++|||||+|++.+..
T Consensus 137 ~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred cccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 54 34444455668899999999999999987754
No 104
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.48 E-value=5.6e-14 Score=113.98 Aligned_cols=108 Identities=13% Similarity=0.064 Sum_probs=83.3
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---CCcEEEeCCCCC----CCC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---PGVTHIGGDMFK----SIP 155 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---~~i~~~~~d~~~----~~p 155 (254)
..+.+++.++ ..++.+|||||||+|.++..++++ +.+ ++++|+ +.|++.++++ ..+.....++.. ..+
T Consensus 33 ~~~~il~~l~-l~~g~~VLDlGcGtG~~a~~La~~--g~~-V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~ 108 (261)
T 3iv6_A 33 DRENDIFLEN-IVPGSTVAVIGASTRFLIEKALER--GAS-VTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELA 108 (261)
T ss_dssp HHHHHHHTTT-CCTTCEEEEECTTCHHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGT
T ss_pred HHHHHHHhcC-CCCcCEEEEEeCcchHHHHHHHhc--CCE-EEEEECCHHHHHHHHHHHHhccceeeeeecccccccccC
Confidence 4566777774 778899999999999999999987 456 999999 8899887654 122222222221 122
Q ss_pred C-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 156 A-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 156 ~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
. .|+|++..++|+++.++...++++++++| |||+|++.-.
T Consensus 109 ~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 109 GHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp TCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred CCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 2 39999999999999888999999999999 9999998743
No 105
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.47 E-value=1.5e-13 Score=111.03 Aligned_cols=107 Identities=17% Similarity=0.259 Sum_probs=85.7
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC-CCCc
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPAA 157 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~-~p~~ 157 (254)
...+++... ..+..+|||+|||+|..+..+++. +.+ ++++|+ +.+++.+++. .+++++.+|+.+. .+..
T Consensus 30 ~~~~~~~~~-~~~~~~vLDlGcG~G~~~~~l~~~--~~~-v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 105 (252)
T 1wzn_A 30 VEEIFKEDA-KREVRRVLDLACGTGIPTLELAER--GYE-VVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNE 105 (252)
T ss_dssp HHHHHHHTC-SSCCCEEEEETCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSC
T ss_pred HHHHHHHhc-ccCCCEEEEeCCCCCHHHHHHHHC--CCe-EEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCC
Confidence 344555552 456789999999999999999987 557 999999 8888877643 4799999999875 4444
Q ss_pred -cEEEec-cccccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 158 -DAIFMK-WVLTTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 158 -D~v~~~-~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
|+|++. ..+++++.++..++|++++++|+|||++++.-
T Consensus 106 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 106 FDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp EEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 999986 45677777888999999999999999988743
No 106
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.47 E-value=1.2e-14 Score=114.34 Aligned_cols=111 Identities=15% Similarity=0.030 Sum_probs=71.4
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCCCC---
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSIP--- 155 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~~p--- 155 (254)
.+.+++.++...++.+|||+|||+|..+..+++.+|+.+ ++++|+ +.+++.++++ .+++++.+|+.+.++
T Consensus 18 ~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 96 (215)
T 4dzr_A 18 VEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVS-VTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERA 96 (215)
T ss_dssp HHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEE-EEEEECC-------------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhh
Confidence 344455543236788999999999999999999998888 999999 8898888765 168888999887643
Q ss_pred ---C-ccEEEecccccc------CCHHHH------------------HHHHHHHHHhCCCCCEEEEEcc
Q 025363 156 ---A-ADAIFMKWVLTT------WTDDEC------------------KLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 156 ---~-~D~v~~~~vlh~------~~~~~~------------------~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+ .|+|++...++. ++++.. ..++++++++|||||++++.+.
T Consensus 97 ~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 97 ERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp HTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred hccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 3 399999544432 222211 6889999999999999665543
No 107
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.46 E-value=9.8e-14 Score=116.00 Aligned_cols=100 Identities=20% Similarity=0.238 Sum_probs=80.9
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------------CCcEEEeCCCCCC-----C--
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------------PGVTHIGGDMFKS-----I-- 154 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------------~~i~~~~~d~~~~-----~-- 154 (254)
.+..+|||||||+|..+..+++. +..+ ++++|+ +.+++.+++. .+++++.+|+.+. +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINK-LVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSE-EEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCE-EEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 36789999999999999999874 4567 999999 8888776542 2689999999875 2
Q ss_pred CC-c-cEEEeccccccC--CHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 155 PA-A-DAIFMKWVLTTW--TDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 155 p~-~-D~v~~~~vlh~~--~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
+. . |+|++..++|+. +.++...+|++++++|||||++++..+.
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 22 3 999999999976 4467789999999999999999987653
No 108
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.45 E-value=4.3e-13 Score=105.27 Aligned_cols=122 Identities=16% Similarity=0.165 Sum_probs=92.8
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------C-CcEEEeCCCCCCCC---
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------P-GVTHIGGDMFKSIP--- 155 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~-~i~~~~~d~~~~~p--- 155 (254)
.++..++ ..++.+|||||||+|.++..+++. +.+ ++++|+ +.+++.++++ + +++++.+|+.+.++
T Consensus 46 ~~l~~l~-~~~~~~vLDlGcG~G~~~~~la~~--~~~-v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 121 (204)
T 3njr_A 46 LTLAALA-PRRGELLWDIGGGSGSVSVEWCLA--GGR-AITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLP 121 (204)
T ss_dssp HHHHHHC-CCTTCEEEEETCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSC
T ss_pred HHHHhcC-CCCCCEEEEecCCCCHHHHHHHHc--CCE-EEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCC
Confidence 3455553 677889999999999999999988 667 999999 8888877643 3 79999999988532
Q ss_pred CccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHH
Q 025363 156 AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFK 235 (254)
Q Consensus 156 ~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 235 (254)
..|+|++...+ +.. +++++.++|||||++++..... .+..++.
T Consensus 122 ~~D~v~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~~~------------------------------~~~~~~~ 164 (204)
T 3njr_A 122 LPEAVFIGGGG------SQA-LYDRLWEWLAPGTRIVANAVTL------------------------------ESETLLT 164 (204)
T ss_dssp CCSEEEECSCC------CHH-HHHHHHHHSCTTCEEEEEECSH------------------------------HHHHHHH
T ss_pred CCCEEEECCcc------cHH-HHHHHHHhcCCCcEEEEEecCc------------------------------ccHHHHH
Confidence 34999987644 123 8999999999999999854321 1234566
Q ss_pred HHHHhCCCCeeeEE
Q 025363 236 QLGFFAGFPHLRLY 249 (254)
Q Consensus 236 ~ll~~aGf~~~~~~ 249 (254)
+++++.|+++.++.
T Consensus 165 ~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 165 QLHARHGGQLLRID 178 (204)
T ss_dssp HHHHHHCSEEEEEE
T ss_pred HHHHhCCCcEEEEE
Confidence 77888887766654
No 109
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.45 E-value=1.6e-13 Score=107.95 Aligned_cols=102 Identities=17% Similarity=0.200 Sum_probs=84.1
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCC-CCC-c-cEEEecccc
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA-A-DAIFMKWVL 166 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~-~p~-~-D~v~~~~vl 166 (254)
..+..+|||||||+|.++..+++..+. + ++++|+ +.+++.+++. +++++..+|+.+. ++. . |+|++..++
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~-~-v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFP-N-VTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTL 117 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCC-C-EEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCC-c-EEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcch
Confidence 356789999999999999999998654 7 999999 8887776543 5899999999875 443 3 999998888
Q ss_pred ccCC-------------HHHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 167 TTWT-------------DDECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 167 h~~~-------------~~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
+++. .++..++|++++++|||||++++.+...
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 118 DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 7654 4567899999999999999999988643
No 110
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.44 E-value=6.2e-13 Score=104.82 Aligned_cols=95 Identities=13% Similarity=0.165 Sum_probs=74.1
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHH----HhhCCCCCCcEEEeCCCCCC-----CCCc-cEEEec
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEV----VAEAPSIPGVTHIGGDMFKS-----IPAA-DAIFMK 163 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~----~~~~~~~~~i~~~~~d~~~~-----~p~~-D~v~~~ 163 (254)
.+++.+|||||||+|..+..+++..+..+ ++++|+ +.+ .+.++...++.++.+|+.+. +++. |+|++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~-V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGI-IYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSE-EEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCE-EEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEe
Confidence 56788999999999999999999987667 999999 764 34444446799999998763 2333 999986
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 164 WVLTTWTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
+.+. .+...++++++++|||||+|++.
T Consensus 134 -~~~~---~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 134 -IAQK---NQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp -CCST---THHHHHHHHHHHHEEEEEEEEEE
T ss_pred -ccCh---hHHHHHHHHHHHHhCCCCEEEEE
Confidence 3322 34456799999999999999997
No 111
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.44 E-value=4.1e-13 Score=122.55 Aligned_cols=101 Identities=21% Similarity=0.224 Sum_probs=85.6
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCC------------CCCcEEEeCCCCCC-CCC--c
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPS------------IPGVTHIGGDMFKS-IPA--A 157 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~------------~~~i~~~~~d~~~~-~p~--~ 157 (254)
..++.+|||||||+|.++..+++.. |..+ ++++|+ +.+++.+++ ..+|+|+.+|+.+. .+. .
T Consensus 719 ~~~g~rVLDVGCGTG~lai~LAr~g~p~a~-VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sF 797 (950)
T 3htx_A 719 ESSASTLVDFGCGSGSLLDSLLDYPTSLQT-IIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDV 797 (950)
T ss_dssp HSCCSEEEEETCSSSHHHHHHTSSCCCCCE-EEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSC
T ss_pred ccCCCEEEEECCCCCHHHHHHHHhCCCCCe-EEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCe
Confidence 3467899999999999999999998 4467 999999 888887754 15799999999876 332 3
Q ss_pred cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 158 DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 158 D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
|+|++..++|++++.....++++++++|||| .+++..+.
T Consensus 798 DlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 798 DIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp CEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred eEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 9999999999999988889999999999999 77776654
No 112
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.43 E-value=8.7e-14 Score=114.27 Aligned_cols=102 Identities=14% Similarity=0.089 Sum_probs=78.8
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHH-cCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCCC
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQK-HRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA 156 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p~ 156 (254)
..+++.++ ..++.+|||+|||+|..+..+++. .|..+ ++++|+ +.+++.+++. ++++++.+|+.+.++.
T Consensus 100 ~~~~~~~~-~~~~~~VLD~G~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 177 (275)
T 1yb2_A 100 SYIIMRCG-LRPGMDILEVGVGSGNMSSYILYALNGKGT-LTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISD 177 (275)
T ss_dssp ------CC-CCTTCEEEEECCTTSHHHHHHHHHHTTSSE-EEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCS
T ss_pred HHHHHHcC-CCCcCEEEEecCCCCHHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcC
Confidence 35666664 778899999999999999999998 67788 999999 8887765532 4799999999887554
Q ss_pred --ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 157 --ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 157 --~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.|+|++ ++++ ..++|++++++|||||++++...
T Consensus 178 ~~fD~Vi~-----~~~~--~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 178 QMYDAVIA-----DIPD--PWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp CCEEEEEE-----CCSC--GGGSHHHHHHTEEEEEEEEEEES
T ss_pred CCccEEEE-----cCcC--HHHHHHHHHHHcCCCCEEEEEeC
Confidence 399998 2332 24789999999999999999763
No 113
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.43 E-value=6e-14 Score=111.83 Aligned_cols=113 Identities=10% Similarity=0.027 Sum_probs=87.3
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCCC--C-C-c-cEEEecccccc
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKSI--P-A-A-DAIFMKWVLTT 168 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~~--p-~-~-D~v~~~~vlh~ 168 (254)
.++.+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. ++++++.+|+.+.. + . . |+|++..
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~---- 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AAR-WAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR---- 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSE-EEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES----
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCE-EEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC----
Confidence 46789999999999999999998 457 999999 8888887654 78999999997653 3 3 3 9999862
Q ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCCeeeE
Q 025363 169 WTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHLRL 248 (254)
Q Consensus 169 ~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 248 (254)
+...+|++++++|||||+|+... ...+.+++.++++++||+..++
T Consensus 120 ----~~~~~l~~~~~~LkpgG~l~~~~-------------------------------~~~~~~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 120 ----GPTSVILRLPELAAPDAHFLYVG-------------------------------PRLNVPEVPERLAAVGWDIVAE 164 (226)
T ss_dssp ----CCSGGGGGHHHHEEEEEEEEEEE-------------------------------SSSCCTHHHHHHHHTTCEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCcEEEEeC-------------------------------CcCCHHHHHHHHHHCCCeEEEE
Confidence 23478999999999999998110 0123446788888888887765
Q ss_pred EE
Q 025363 249 YR 250 (254)
Q Consensus 249 ~~ 250 (254)
..
T Consensus 165 ~~ 166 (226)
T 3m33_A 165 DH 166 (226)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 114
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.43 E-value=1.5e-12 Score=103.84 Aligned_cols=143 Identities=12% Similarity=0.151 Sum_probs=94.4
Q ss_pred HHHHHhhcC--CCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHH----hhCCCCCCcEEEeCCCCCC---
Q 025363 85 MTSVLEGYN--GFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVV----AEAPSIPGVTHIGGDMFKS--- 153 (254)
Q Consensus 85 ~~~i~~~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~----~~~~~~~~i~~~~~d~~~~--- 153 (254)
...++..++ .+.++.+|||+|||+|..+..+++.. |..+ ++++|. +.++ +.+++..+|.++.+|+..+
T Consensus 62 a~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~-V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~ 140 (232)
T 3id6_C 62 AGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGK-AYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSY 140 (232)
T ss_dssp HHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSE-EEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGT
T ss_pred HHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCE-EEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhh
Confidence 344444443 37789999999999999999999875 5667 999999 7664 3344447899999998764
Q ss_pred --CCC-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecC
Q 025363 154 --IPA-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRT 230 (254)
Q Consensus 154 --~p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 230 (254)
+.+ .|+|++.... ..+...+++.+++.|||||+|++.-..... |. ...-. -.
T Consensus 141 ~~~~~~~D~I~~d~a~----~~~~~il~~~~~~~LkpGG~lvisik~~~~--------------d~------t~~~~-e~ 195 (232)
T 3id6_C 141 KSVVENVDVLYVDIAQ----PDQTDIAIYNAKFFLKVNGDMLLVIKARSI--------------DV------TKDPK-EI 195 (232)
T ss_dssp TTTCCCEEEEEECCCC----TTHHHHHHHHHHHHEEEEEEEEEEEC---------------------------CCSS-SS
T ss_pred hccccceEEEEecCCC----hhHHHHHHHHHHHhCCCCeEEEEEEccCCc--------------cc------CCCHH-HH
Confidence 122 3999886543 233344556777799999999987321110 00 00001 11
Q ss_pred HHHHHHHHHhCCCCeeeEEEccC
Q 025363 231 EQEFKQLGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 231 ~~e~~~ll~~aGf~~~~~~~~~~ 253 (254)
.++..+.|+++||++++...+.-
T Consensus 196 ~~~~~~~L~~~gf~~~~~~~l~p 218 (232)
T 3id6_C 196 YKTEVEKLENSNFETIQIINLDP 218 (232)
T ss_dssp TTHHHHHHHHTTEEEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEeccCC
Confidence 23455678899999999887643
No 115
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.43 E-value=4.3e-13 Score=106.97 Aligned_cols=128 Identities=15% Similarity=0.108 Sum_probs=94.2
Q ss_pred CCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCC--CCCCC-c-cEEEec
Q 025363 95 FKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMF--KSIPA-A-DAIFMK 163 (254)
Q Consensus 95 ~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~--~~~p~-~-D~v~~~ 163 (254)
.+++.+|||+||| +|.++..+++.. +.+ ++++|+ +.+++.++++ .+++++.+|+. ..++. . |+|++.
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~-v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCK-VTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCE-EEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCE-EEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 5678899999999 999999999987 567 999999 8888877653 37999999963 34443 3 999988
Q ss_pred cccccCCHH-----------------HHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCc
Q 025363 164 WVLTTWTDD-----------------ECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKG 226 (254)
Q Consensus 164 ~vlh~~~~~-----------------~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (254)
-.++..++. ....+++++.+.|||||++++.-...
T Consensus 131 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------------------------- 182 (230)
T 3evz_A 131 PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK---------------------------- 182 (230)
T ss_dssp CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC----------------------------
T ss_pred CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc----------------------------
Confidence 666544321 13789999999999999999853210
Q ss_pred eecCHHHHHHHHHhCCCCeeeEEEccC
Q 025363 227 NHRTEQEFKQLGFFAGFPHLRLYRVLD 253 (254)
Q Consensus 227 ~~~t~~e~~~ll~~aGf~~~~~~~~~~ 253 (254)
....+++.++++++||++..+....|
T Consensus 183 -~~~~~~~~~~l~~~g~~~~~~~~~~g 208 (230)
T 3evz_A 183 -EKLLNVIKERGIKLGYSVKDIKFKVG 208 (230)
T ss_dssp -HHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred -HhHHHHHHHHHHHcCCceEEEEecCC
Confidence 01245678889999998776655444
No 116
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.42 E-value=7e-13 Score=102.46 Aligned_cols=108 Identities=11% Similarity=0.142 Sum_probs=87.7
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------C--CcEEEeCCCCCCCC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------P--GVTHIGGDMFKSIP 155 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~--~i~~~~~d~~~~~p 155 (254)
.+.+++.+. ..++.+|||+|||+|.++..+++. ..+ ++++|+ +.+++.+++. . +++++.+|+.+..+
T Consensus 41 ~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~~~~~--~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (194)
T 1dus_A 41 TKILVENVV-VDKDDDILDLGCGYGVIGIALADE--VKS-TTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK 116 (194)
T ss_dssp HHHHHHHCC-CCTTCEEEEETCTTSHHHHHHGGG--SSE-EEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT
T ss_pred HHHHHHHcc-cCCCCeEEEeCCCCCHHHHHHHHc--CCe-EEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc
Confidence 445666664 667889999999999999999988 567 999999 8887776643 3 49999999988754
Q ss_pred C-c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 156 A-A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 156 ~-~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
. . |+|++...+|+ ..+....++++++++|+|||++++....
T Consensus 117 ~~~~D~v~~~~~~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 117 DRKYNKIITNPPIRA-GKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp TSCEEEEEECCCSTT-CHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred cCCceEEEECCCccc-chhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 4 3 99999888874 4567789999999999999999997753
No 117
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.41 E-value=2.2e-13 Score=115.39 Aligned_cols=111 Identities=15% Similarity=0.156 Sum_probs=90.6
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCCCCCc-
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSIPAA- 157 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~~p~~- 157 (254)
.+.+++.++ ..+..+|||+|||+|.++..+++.+|+.+ ++++|. +.+++.++++ ..+++..+|+++..++.
T Consensus 185 ~~~ll~~l~-~~~~~~VLDlGcG~G~~~~~la~~~~~~~-v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~f 262 (343)
T 2pjd_A 185 SQLLLSTLT-PHTKGKVLDVGCGAGVLSVAFARHSPKIR-LTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRF 262 (343)
T ss_dssp HHHHHHHSC-TTCCSBCCBTTCTTSHHHHHHHHHCTTCB-CEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCE
T ss_pred HHHHHHhcC-cCCCCeEEEecCccCHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCe
Confidence 455666663 44567999999999999999999999888 999999 8888777653 34678899998765444
Q ss_pred cEEEecccccc---CCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 158 DAIFMKWVLTT---WTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 158 D~v~~~~vlh~---~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
|+|++..++|+ ++.+...+++++++++|||||++++....
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 99999999986 34566789999999999999999997653
No 118
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.41 E-value=1.9e-12 Score=103.08 Aligned_cols=132 Identities=16% Similarity=0.129 Sum_probs=92.1
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhh----CCCCCCcEEEeCCCCCC-----CCCc-cEEEe
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAE----APSIPGVTHIGGDMFKS-----IPAA-DAIFM 162 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~----~~~~~~i~~~~~d~~~~-----~p~~-D~v~~ 162 (254)
..++.+|||+|||+|.++..+++.. |..+ ++++|. +.+++. ++..++++++.+|+.+. .++. |+|++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGK-IFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeE-EEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence 6678899999999999999999986 5567 999998 755444 33447899999999873 2333 99997
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCC
Q 025363 163 KWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAG 242 (254)
Q Consensus 163 ~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 242 (254)
... .......++++++++|||||++++. .........+ .......+++.++ +++
T Consensus 150 ~~~----~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~-------------------~~~~~~~~~l~~l-~~~- 203 (227)
T 1g8a_A 150 DVA----QPTQAKILIDNAEVYLKRGGYGMIA-VKSRSIDVTK-------------------EPEQVFREVEREL-SEY- 203 (227)
T ss_dssp CCC----STTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCTTS-------------------CHHHHHHHHHHHH-HTT-
T ss_pred CCC----CHhHHHHHHHHHHHhcCCCCEEEEE-EecCCCCCCC-------------------ChhhhhHHHHHHH-Hhh-
Confidence 544 2234456699999999999999997 2211110000 0011245677776 777
Q ss_pred CCeeeEEEccC
Q 025363 243 FPHLRLYRVLD 253 (254)
Q Consensus 243 f~~~~~~~~~~ 253 (254)
|++++...+..
T Consensus 204 f~~~~~~~~~~ 214 (227)
T 1g8a_A 204 FEVIERLNLEP 214 (227)
T ss_dssp SEEEEEEECTT
T ss_pred ceeeeEeccCc
Confidence 99988877643
No 119
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.41 E-value=3.4e-13 Score=110.61 Aligned_cols=97 Identities=15% Similarity=0.172 Sum_probs=79.5
Q ss_pred CCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCCC-ccEEEeccc
Q 025363 94 GFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA-ADAIFMKWV 165 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p~-~D~v~~~~v 165 (254)
...++.+|||||||+|.++..++.+.++.+ ++++|+ +++++.+++. .+|+|+.+|+.+.... .|+|++...
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~-V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~ 197 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMR-VNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAAL 197 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCE-EEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTT
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCE-EEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCC
Confidence 477899999999999988777777778888 999999 9999988754 6899999999764322 399998654
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 166 LTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 166 lh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
. ++..+++++++++|||||+|++.+.
T Consensus 198 ~-----~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 198 A-----EPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp C-----SCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred c-----cCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 2 3446899999999999999999763
No 120
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.41 E-value=4.6e-13 Score=103.21 Aligned_cols=100 Identities=13% Similarity=0.070 Sum_probs=75.8
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC---CCC-ccEEEec
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IPA-ADAIFMK 163 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~---~p~-~D~v~~~ 163 (254)
..++.+|||+|||+|..+..+++. ..+ ++++|+ +.+++.++++ ++++++..|+... .++ .|+|++.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~-v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKK-VYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSE-EEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCE-EEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 567889999999999999999988 567 999999 8898887653 6799998776552 233 3999876
Q ss_pred -ccccc------CCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 164 -WVLTT------WTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 164 -~vlh~------~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
..++. ...+....++++++++|||||++++....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 23321 02356678899999999999999997653
No 121
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.41 E-value=2.2e-13 Score=110.41 Aligned_cols=129 Identities=16% Similarity=0.124 Sum_probs=99.3
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHH-cCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQK-HRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI 154 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~ 154 (254)
....++..++ ..++.+|||+|||+|.++..+++. .|..+ ++++|. +.+++.++++ ++++++.+|+.+.+
T Consensus 81 ~~~~i~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 158 (255)
T 3mb5_A 81 DAALIVAYAG-ISPGDFIVEAGVGSGALTLFLANIVGPEGR-VVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI 158 (255)
T ss_dssp HHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSE-EEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC
T ss_pred HHHHHHHhhC-CCCCCEEEEecCCchHHHHHHHHHhCCCeE-EEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc
Confidence 3445667774 788899999999999999999999 77888 999999 8888877653 45999999999776
Q ss_pred CC--ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHH
Q 025363 155 PA--ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQ 232 (254)
Q Consensus 155 p~--~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 232 (254)
+. .|+|++. .++ ...++++++++|+|||++++...... ...
T Consensus 159 ~~~~~D~v~~~-----~~~--~~~~l~~~~~~L~~gG~l~~~~~~~~------------------------------~~~ 201 (255)
T 3mb5_A 159 EEENVDHVILD-----LPQ--PERVVEHAAKALKPGGFFVAYTPCSN------------------------------QVM 201 (255)
T ss_dssp CCCSEEEEEEC-----SSC--GGGGHHHHHHHEEEEEEEEEEESSHH------------------------------HHH
T ss_pred CCCCcCEEEEC-----CCC--HHHHHHHHHHHcCCCCEEEEEECCHH------------------------------HHH
Confidence 55 3999872 332 24789999999999999998653210 233
Q ss_pred HHHHHHHhCC--CCeeeEEEc
Q 025363 233 EFKQLGFFAG--FPHLRLYRV 251 (254)
Q Consensus 233 e~~~ll~~aG--f~~~~~~~~ 251 (254)
++.++++++| |..+++..+
T Consensus 202 ~~~~~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 202 RLHEKLREFKDYFMKPRTINV 222 (255)
T ss_dssp HHHHHHHHTGGGBSCCEEECC
T ss_pred HHHHHHHHcCCCccccEEEEE
Confidence 5667788888 887766543
No 122
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.40 E-value=8.9e-14 Score=106.24 Aligned_cols=95 Identities=14% Similarity=0.112 Sum_probs=78.5
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------C-CcEEEeCCCCCC-CCC-ccEEEeccc
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------P-GVTHIGGDMFKS-IPA-ADAIFMKWV 165 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~-~i~~~~~d~~~~-~p~-~D~v~~~~v 165 (254)
.+..+|||+|||+|.++..++...|+++ ++++|+ +.|++.++++ . ++++ .|..+. .+. +|+|++..+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~-~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKII-YHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCE-EEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCE-EEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 4578999999999999999999999998 999999 8999888754 2 4555 666555 344 399999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 166 LTTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 166 lh~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
+|++ ++....+.++.+.|+|||.++..+
T Consensus 125 LHlL--~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 125 LPVL--KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHH--HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred HHhh--hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 9999 444566779999999999988877
No 123
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.40 E-value=5.7e-13 Score=113.95 Aligned_cols=108 Identities=15% Similarity=0.126 Sum_probs=87.2
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---------CCcEEEeCCCCCCCC
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---------PGVTHIGGDMFKSIP 155 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---------~~i~~~~~d~~~~~p 155 (254)
+.+++.++ ..+..+|||+|||+|.++..+++.+|+.+ ++++|. +.+++.++++ .+++|..+|+++.++
T Consensus 212 ~~ll~~l~-~~~~~~VLDlGcG~G~~s~~la~~~p~~~-V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~ 289 (375)
T 4dcm_A 212 RFFMQHLP-ENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 289 (375)
T ss_dssp HHHHHTCC-CSCCSEEEEETCTTCHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC
T ss_pred HHHHHhCc-ccCCCeEEEEeCcchHHHHHHHHHCCCCE-EEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC
Confidence 34667664 55568999999999999999999999999 999999 8888877753 258889999998865
Q ss_pred C--ccEEEecccccc---CCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 156 A--ADAIFMKWVLTT---WTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 156 ~--~D~v~~~~vlh~---~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
. .|+|++.-.+|. ..+....++++++++.|||||+++++.
T Consensus 290 ~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 290 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 4 399999988885 334455689999999999999999965
No 124
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.39 E-value=2.5e-13 Score=108.85 Aligned_cols=102 Identities=25% Similarity=0.235 Sum_probs=82.9
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCCC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA 156 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p~ 156 (254)
....+++.++ ..++.+|||||||+|.++..+++..+ .+ ++++|. +.+++.+++. .++++..+|+...++.
T Consensus 79 ~~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~~~-~~-v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 155 (235)
T 1jg1_A 79 MVAIMLEIAN-LKPGMNILEVGTGSGWNAALISEIVK-TD-VYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP 155 (235)
T ss_dssp HHHHHHHHHT-CCTTCCEEEECCTTSHHHHHHHHHHC-SC-EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHhC-CE-EEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC
Confidence 4556667664 77888999999999999999999987 77 999998 8888777653 4699999998555443
Q ss_pred ---ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 157 ---ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 157 ---~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.|+|++..+++++.+ ++.+.|+|||++++.-.
T Consensus 156 ~~~fD~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 156 KAPYDVIIVTAGAPKIPE--------PLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp GCCEEEEEECSBBSSCCH--------HHHHTEEEEEEEEEEEC
T ss_pred CCCccEEEECCcHHHHHH--------HHHHhcCCCcEEEEEEe
Confidence 399999999998753 67899999999998654
No 125
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.39 E-value=1.4e-13 Score=110.74 Aligned_cols=121 Identities=15% Similarity=0.068 Sum_probs=91.8
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC-C----CCc-cEEE
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-I----PAA-DAIF 161 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~-~----p~~-D~v~ 161 (254)
+.+..+|||||||+|..+..++...|+.+ ++++|+ +.+++.+++. .+|+++.+|+.+. . ++. |+|+
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLH-VTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEE
Confidence 34678999999999999999999888888 999999 8888777642 4699999998653 2 233 9999
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhC
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFA 241 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a 241 (254)
+..+ .+...+++.++++|+|||++++.+..... ...+++.+.++++
T Consensus 147 ~~~~------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~----------------------------~~~~~~~~~l~~~ 192 (240)
T 1xdz_A 147 ARAV------ARLSVLSELCLPLVKKNGLFVALKAASAE----------------------------EELNAGKKAITTL 192 (240)
T ss_dssp EECC------SCHHHHHHHHGGGEEEEEEEEEEECC-CH----------------------------HHHHHHHHHHHHT
T ss_pred Eecc------CCHHHHHHHHHHhcCCCCEEEEEeCCCch----------------------------HHHHHHHHHHHHc
Confidence 8763 22468999999999999999886321100 0124567788899
Q ss_pred CCCeeeEEE
Q 025363 242 GFPHLRLYR 250 (254)
Q Consensus 242 Gf~~~~~~~ 250 (254)
||++.++..
T Consensus 193 g~~~~~~~~ 201 (240)
T 1xdz_A 193 GGELENIHS 201 (240)
T ss_dssp TEEEEEEEE
T ss_pred CCeEeEEEE
Confidence 998877654
No 126
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.39 E-value=1.9e-12 Score=106.27 Aligned_cols=148 Identities=14% Similarity=0.124 Sum_probs=94.7
Q ss_pred HHHHHhhcCCCC-CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhh-CCCCCCcEEEe-CCCCC----CCCC
Q 025363 85 MTSVLEGYNGFK-GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAE-APSIPGVTHIG-GDMFK----SIPA 156 (254)
Q Consensus 85 ~~~i~~~~~~~~-~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~-~~~~~~i~~~~-~d~~~----~~p~ 156 (254)
...+++.+. .. ++.+|||||||||.++..+++. +..+ ++++|. +.|++. .+..+++.... .|+.. .+|.
T Consensus 73 l~~~l~~~~-~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~-V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~ 149 (291)
T 3hp7_A 73 LEKALAVFN-LSVEDMITIDIGASTGGFTDVMLQN-GAKL-VYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTE 149 (291)
T ss_dssp HHHHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TCSE-EEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTT
T ss_pred HHHHHHhcC-CCccccEEEecCCCccHHHHHHHhC-CCCE-EEEEECCHHHHHHHHHhCcccceecccCceecchhhCCC
Confidence 445666664 43 5679999999999999998887 3446 999999 888876 33335554332 23311 1343
Q ss_pred --ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChh-hhhhcccchHhhhhccccCceecCHHH
Q 025363 157 --ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQ-RTRALLEGDIFVMTIYRAKGNHRTEQE 233 (254)
Q Consensus 157 --~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~t~~e 233 (254)
.|++++..++|.+ ..+|.+++++|+|||++++.- .|+...... ........|. ....++.++
T Consensus 150 ~~fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~lv--kPqfe~~~~~~~~~G~vrd~--------~~~~~~~~~ 214 (291)
T 3hp7_A 150 GLPSFASIDVSFISL-----NLILPALAKILVDGGQVVALV--KPQFEAGREQIGKNGIVRES--------SIHEKVLET 214 (291)
T ss_dssp CCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEE--CGGGTSCGGGCC-CCCCCCH--------HHHHHHHHH
T ss_pred CCCCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEEE--CcccccChhhcCCCCccCCH--------HHHHHHHHH
Confidence 3999998888765 578999999999999999862 111110000 0000000000 012246789
Q ss_pred HHHHHHhCCCCeeeEEE
Q 025363 234 FKQLGFFAGFPHLRLYR 250 (254)
Q Consensus 234 ~~~ll~~aGf~~~~~~~ 250 (254)
+.++++++||++..+..
T Consensus 215 v~~~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 215 VTAFAVDYGFSVKGLDF 231 (291)
T ss_dssp HHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHCCCEEEEEEE
Confidence 99999999999877654
No 127
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.38 E-value=4.9e-13 Score=107.02 Aligned_cols=132 Identities=13% Similarity=0.074 Sum_probs=91.6
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHH----HhhCCCCCCcEEEeCCCCCC--C---CCc-cEEEe
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEV----VAEAPSIPGVTHIGGDMFKS--I---PAA-DAIFM 162 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~----~~~~~~~~~i~~~~~d~~~~--~---p~~-D~v~~ 162 (254)
..++.+|||+|||+|.++..+++.+ |..+ ++++|+ +.+ ++.++...+++++.+|+.+. + +.. |+|++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~-v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGL-VYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCE-EEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcE-EEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 6678899999999999999999997 6678 999998 654 44444447899999999874 2 223 99998
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCC
Q 025363 163 KWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAG 242 (254)
Q Consensus 163 ~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 242 (254)
... ..+....++++++++|||||++++.-........ ... ..+-..+ .++|+++|
T Consensus 154 ~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~----------~~~----------~~~~~~~-~~~l~~~G 208 (233)
T 2ipx_A 154 DVA----QPDQTRIVALNAHTFLRNGGHFVISIKANCIDST----------ASA----------EAVFASE-VKKMQQEN 208 (233)
T ss_dssp CCC----CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSS----------SCH----------HHHHHHH-HHTTGGGT
T ss_pred cCC----CccHHHHHHHHHHHHcCCCeEEEEEEcccccccC----------CCH----------HHHHHHH-HHHHHHCC
Confidence 544 2344567799999999999999983211000000 000 0011123 58899999
Q ss_pred CCeeeEEEcc
Q 025363 243 FPHLRLYRVL 252 (254)
Q Consensus 243 f~~~~~~~~~ 252 (254)
|++++...+.
T Consensus 209 f~~~~~~~~~ 218 (233)
T 2ipx_A 209 MKPQEQLTLE 218 (233)
T ss_dssp EEEEEEEECT
T ss_pred CceEEEEecC
Confidence 9998876653
No 128
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.38 E-value=4.4e-13 Score=111.56 Aligned_cols=129 Identities=16% Similarity=0.174 Sum_probs=92.8
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC----------CCCcEEEeCCCCCCC---CC-c-cE
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-A-DA 159 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~----------~~~i~~~~~d~~~~~---p~-~-D~ 159 (254)
.+..+|||||||+|.++..+++..+..+ ++++|+ +.+++.+++ .++++++.+|+.+.. +. . |+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEH-CDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCE-EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 4568999999999999999998877777 999999 888776653 268999999987652 33 3 99
Q ss_pred EEeccccccCCHHHH--HHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHH
Q 025363 160 IFMKWVLTTWTDDEC--KLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQL 237 (254)
Q Consensus 160 v~~~~vlh~~~~~~~--~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 237 (254)
|++....+.++.... .+++++++++|||||+|++.... . + .. .....++.+.
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~---~----~-------~~------------~~~~~~~~~~ 226 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES---I----W-------LD------------LELIEKMSRF 226 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECC---T----T-------TC------------HHHHHHHHHH
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC---c----c-------cc------------hHHHHHHHHH
Confidence 999776665443332 58999999999999999986321 0 0 00 0235678889
Q ss_pred HHhCCCCeeeEEEc
Q 025363 238 GFFAGFPHLRLYRV 251 (254)
Q Consensus 238 l~~aGf~~~~~~~~ 251 (254)
++++||..++....
T Consensus 227 l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 227 IRETGFASVQYALM 240 (304)
T ss_dssp HHHHTCSEEEEEEC
T ss_pred HHhCCCCcEEEEEe
Confidence 99999998876643
No 129
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.38 E-value=4.4e-14 Score=114.57 Aligned_cols=144 Identities=10% Similarity=0.013 Sum_probs=94.4
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCC----CCC----C-ccE
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFK----SIP----A-ADA 159 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~----~~p----~-~D~ 159 (254)
+..+|||+|||+|.++..+++++|+.+ ++++|+ +.+++.++++ ++++++.+|+.+ .++ . .|+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWY-FLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 567999999999999999999988888 999999 8888877653 469999999643 344 2 399
Q ss_pred EEeccccccCCH-------------HHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCc
Q 025363 160 IFMKWVLTTWTD-------------DECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKG 226 (254)
Q Consensus 160 v~~~~vlh~~~~-------------~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (254)
|++.-.+|.... +....++.+++++|||||.+.+.+...... ......... .. ...+
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~------~~~l~~~g~--~~--~~~~ 213 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDS------LQLKKRLRW--YS--CMLG 213 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHH------HHHGGGBSC--EE--EEES
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHH------HhcccceEE--EE--ECCC
Confidence 999866554320 112356788999999999998876543211 000000000 00 1112
Q ss_pred eecCHHHHHHHHHhCCCCeeeEEEc
Q 025363 227 NHRTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 227 ~~~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
...+.+++.++++++||+.+++..+
T Consensus 214 ~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 214 KKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp STTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred ChhHHHHHHHHHHHcCCCceEEEEE
Confidence 3345588999999999998887654
No 130
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.38 E-value=3.4e-13 Score=109.49 Aligned_cols=118 Identities=15% Similarity=0.162 Sum_probs=92.5
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---C--CcEEEeCCCCCCCCC--ccEEEeccccc
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---P--GVTHIGGDMFKSIPA--ADAIFMKWVLT 167 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---~--~i~~~~~d~~~~~p~--~D~v~~~~vlh 167 (254)
.++.+|||+|||+|.++..+++..+ + ++++|+ +.+++.++++ . .+++..+|+.+.++. .|+|++....|
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~-v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--K-ALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAE 195 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--E-EEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--e-EEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHH
Confidence 4578999999999999999888755 7 999999 8888777653 1 289999998765433 39999865443
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCCeee
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHLR 247 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 247 (254)
....+++++++.|+|||++++.+... .+.+++.++++++||++++
T Consensus 196 -----~~~~~l~~~~~~LkpgG~lils~~~~------------------------------~~~~~v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 196 -----LHAALAPRYREALVPGGRALLTGILK------------------------------DRAPLVREAMAGAGFRPLE 240 (254)
T ss_dssp -----HHHHHHHHHHHHEEEEEEEEEEEEEG------------------------------GGHHHHHHHHHHTTCEEEE
T ss_pred -----HHHHHHHHHHHHcCCCCEEEEEeecc------------------------------CCHHHHHHHHHHCCCEEEE
Confidence 35689999999999999999965421 1356788999999999988
Q ss_pred EEEc
Q 025363 248 LYRV 251 (254)
Q Consensus 248 ~~~~ 251 (254)
+...
T Consensus 241 ~~~~ 244 (254)
T 2nxc_A 241 EAAE 244 (254)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 7654
No 131
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.37 E-value=3.4e-12 Score=110.36 Aligned_cols=112 Identities=14% Similarity=0.260 Sum_probs=87.0
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhC-------CC--------CCCcEEEeC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEA-------PS--------IPGVTHIGG 148 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~-------~~--------~~~i~~~~~ 148 (254)
...+++.++ ..++.+|||||||+|.++..+++.++..+ ++++|+ +.+++.+ +. ..+|+++.+
T Consensus 231 v~~ml~~l~-l~~g~~VLDLGCGsG~la~~LA~~~g~~~-V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g 308 (433)
T 1u2z_A 231 LSDVYQQCQ-LKKGDTFMDLGSGVGNCVVQAALECGCAL-SFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK 308 (433)
T ss_dssp HHHHHHHTT-CCTTCEEEEESCTTSHHHHHHHHHHCCSE-EEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc
Confidence 455667774 77889999999999999999999887777 999998 7766655 32 257999887
Q ss_pred CCCCC---C----CCccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCC
Q 025363 149 DMFKS---I----PAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 201 (254)
Q Consensus 149 d~~~~---~----p~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~ 201 (254)
|.+.. + ...|+|++.++++. ++....|+++.+.|||||+|++.+...+..
T Consensus 309 D~~~~~~~~~~~~~~FDvIvvn~~l~~---~d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 309 KSFVDNNRVAELIPQCDVILVNNFLFD---EDLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp SCSTTCHHHHHHGGGCSEEEECCTTCC---HHHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred CccccccccccccCCCCEEEEeCcccc---ccHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 65432 2 12499998877742 456688999999999999999998776654
No 132
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.37 E-value=4.6e-13 Score=104.22 Aligned_cols=103 Identities=14% Similarity=0.092 Sum_probs=81.0
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC--C-CCc-cEEE
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS--I-PAA-DAIF 161 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~--~-p~~-D~v~ 161 (254)
.+++.+|||+|||+|..+..+++.+ |..+ ++++|+ +.+++.+++. ++++++.+|+.+. . ++. |+|+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGR-VFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCE-EEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 5667899999999999999999986 5667 999999 8888877653 5799999998654 2 233 9999
Q ss_pred ecccc-------ccCCHHHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 162 MKWVL-------TTWTDDECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 162 ~~~vl-------h~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
+...+ .....++..++++++.++|||||++++.....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 87654 11123456679999999999999999987543
No 133
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.37 E-value=6.6e-13 Score=102.44 Aligned_cols=101 Identities=18% Similarity=0.124 Sum_probs=81.1
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC---
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP--- 155 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p--- 155 (254)
.+++.+ ...++.+|||+|||+|..+..+++.. .+ ++++|. +.+++.+++. +++.+..+|+.+.++
T Consensus 24 ~~~~~~-~~~~~~~vldiG~G~G~~~~~l~~~~--~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 99 (192)
T 1l3i_A 24 LIMCLA-EPGKNDVAVDVGCGTGGVTLELAGRV--RR-VYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIP 99 (192)
T ss_dssp HHHHHH-CCCTTCEEEEESCTTSHHHHHHHTTS--SE-EEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSC
T ss_pred HHHHhc-CCCCCCEEEEECCCCCHHHHHHHHhc--CE-EEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCC
Confidence 344445 36778899999999999999999887 56 999999 8887776542 579999999876433
Q ss_pred CccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 156 AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 156 ~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
..|+|++..+++++ ..++++++++|+|||++++...
T Consensus 100 ~~D~v~~~~~~~~~-----~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 100 DIDIAVVGGSGGEL-----QEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp CEEEEEESCCTTCH-----HHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCEEEECCchHHH-----HHHHHHHHHhcCCCcEEEEEec
Confidence 24999998887653 6889999999999999998653
No 134
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.37 E-value=3.8e-13 Score=111.81 Aligned_cols=98 Identities=11% Similarity=0.137 Sum_probs=75.6
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----C--------CcEEEeCCCCCC---------C
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----P--------GVTHIGGDMFKS---------I 154 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~--------~i~~~~~d~~~~---------~ 154 (254)
++.+|||||||+|..+..+++.. ..+ ++++|+ +.+++.|++. . +++|...|+..+ .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~-v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IAL-LVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSE-EEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCe-EEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 46899999999998777666542 346 999999 9999988754 1 256878877322 2
Q ss_pred CC-c-cEEEecccccc-CCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 155 PA-A-DAIFMKWVLTT-WTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 155 p~-~-D~v~~~~vlh~-~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+. . |+|++..++|+ ++.++...+|++++++|||||++++..+
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 33 3 99999999986 4545567999999999999999998765
No 135
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.37 E-value=7.4e-13 Score=116.64 Aligned_cols=107 Identities=15% Similarity=0.107 Sum_probs=86.0
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCCCCC-CC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IP 155 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~~~~-~p 155 (254)
..+.+++.++ ..++.+|||||||+|.++..+++ .+..+ ++++|+.++++.+++. ++|+++.+|+.+. ++
T Consensus 146 ~~~~il~~l~-~~~~~~VLDiGcGtG~la~~la~-~~~~~-V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~ 222 (480)
T 3b3j_A 146 YQRAILQNHT-DFKDKIVLDVGCGSGILSFFAAQ-AGARK-IYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 222 (480)
T ss_dssp HHHHHHHTGG-GTTTCEEEEESCSTTHHHHHHHH-TTCSE-EEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHHHHhhh-hcCCCEEEEecCcccHHHHHHHH-cCCCE-EEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC
Confidence 4555666663 55678999999999999998887 46667 9999995476665532 6799999999884 55
Q ss_pred Cc-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 156 AA-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 156 ~~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
+. |+|++..+++++.+++....+.++++.|||||++++
T Consensus 223 ~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 54 999998888888777778888899999999999985
No 136
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.37 E-value=7.7e-13 Score=106.97 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=79.7
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC---CCC---ccE
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS---IPA---ADA 159 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~---~p~---~D~ 159 (254)
..+..+|||||||+|..+..+++.+| +.+ ++++|+ +.+++.+++. ++|+++.+|+.+. .+. .|+
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQ-LLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCE-EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 34578999999999999999999998 778 999999 8888777643 4899999998664 222 399
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 160 IFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 160 v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
|++... ......+++++.++|||||+|++.+....
T Consensus 140 V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 140 IFIDAD-----KPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp EEECSC-----GGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred EEECCc-----hHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 998543 34456799999999999999998776543
No 137
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.36 E-value=1.8e-12 Score=105.35 Aligned_cols=125 Identities=11% Similarity=0.018 Sum_probs=91.8
Q ss_pred CCC-CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCC---C-Cc-cE
Q 025363 94 GFK-GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI---P-AA-DA 159 (254)
Q Consensus 94 ~~~-~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~---p-~~-D~ 159 (254)
... ++.+|||+|||+|..+..++++.+. + ++++|+ +.+++.++++ ++++++.+|+.+.. + +. |+
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~-v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~ 122 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRTKA-K-IVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADI 122 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTCCC-E-EEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEE
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhcCC-c-EEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccE
Confidence 356 7889999999999999999998765 7 999999 8888777653 47999999998762 2 33 99
Q ss_pred EEeccccccC------------------CHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhc
Q 025363 160 IFMKWVLTTW------------------TDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTI 221 (254)
Q Consensus 160 v~~~~vlh~~------------------~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (254)
|++.-.++.. .......+++.+.++|||||++++.-. .
T Consensus 123 Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~--------------------- 178 (259)
T 3lpm_A 123 VTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR---P--------------------- 178 (259)
T ss_dssp EEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC---T---------------------
T ss_pred EEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc---H---------------------
Confidence 9996443321 113456899999999999999998421 1
Q ss_pred cccCceecCHHHHHHHHHhCCCCeeeEEEc
Q 025363 222 YRAKGNHRTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 222 ~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
....++.+.+++.||...++..+
T Consensus 179 -------~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 179 -------ERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp -------TTHHHHHHHHHHTTEEEEEEEEE
T ss_pred -------HHHHHHHHHHHHCCCceEEEEEe
Confidence 12345667777788877766654
No 138
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.34 E-value=3.4e-12 Score=101.00 Aligned_cols=118 Identities=13% Similarity=0.048 Sum_probs=93.9
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCCC---ccEEEec
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA---ADAIFMK 163 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p~---~D~v~~~ 163 (254)
.+++.+|+|||||+|..+..+++..|..+ ++++|. +..++.++++ ++|++..+|.++.++. .|+|++.
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~-V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~Ivia 91 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKS-AIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIA 91 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEE-EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEc
Confidence 34678999999999999999999988888 999999 8888887754 5799999999988552 4988875
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCC
Q 025363 164 WVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGF 243 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 243 (254)
.+ ..+-...+|..+.+.|+|+|+|++.-. .....++++|.+.||
T Consensus 92 G~----Gg~~i~~Il~~~~~~L~~~~~lVlq~~--------------------------------~~~~~vr~~L~~~Gf 135 (225)
T 3kr9_A 92 GM----GGRLIARILEEGLGKLANVERLILQPN--------------------------------NREDDLRIWLQDHGF 135 (225)
T ss_dssp EE----CHHHHHHHHHHTGGGCTTCCEEEEEES--------------------------------SCHHHHHHHHHHTTE
T ss_pred CC----ChHHHHHHHHHHHHHhCCCCEEEEECC--------------------------------CCHHHHHHHHHHCCC
Confidence 54 234467899999999999999887321 123456788999999
Q ss_pred CeeeEE
Q 025363 244 PHLRLY 249 (254)
Q Consensus 244 ~~~~~~ 249 (254)
.+++..
T Consensus 136 ~i~~e~ 141 (225)
T 3kr9_A 136 QIVAES 141 (225)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887654
No 139
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.34 E-value=4.6e-13 Score=106.20 Aligned_cols=97 Identities=12% Similarity=0.139 Sum_probs=75.8
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC----CCCc--cEEEec
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS----IPAA--DAIFMK 163 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~----~p~~--D~v~~~ 163 (254)
+..+|||||||+|.++..+++.+|+.. ++++|. +.+++.++++ .+++++.+|+.+. ++.. |.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~-v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQD-FLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSE-EEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCe-EEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 467999999999999999999999999 999999 8888776542 5799999998763 4443 888876
Q ss_pred cccccCCH-HHH------HHHHHHHHHhCCCCCEEEEEc
Q 025363 164 WVLTTWTD-DEC------KLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 164 ~vlh~~~~-~~~------~~il~~~~~~L~pgG~l~i~d 195 (254)
.... |+. ... ..++++++++|||||+|++..
T Consensus 113 ~~~p-~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 113 FPDP-WHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp SCCC-CCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCC-ccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 4332 221 111 258999999999999998864
No 140
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.34 E-value=1.8e-12 Score=103.72 Aligned_cols=145 Identities=18% Similarity=0.141 Sum_probs=86.3
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcE--------EEe-CCCCCCC
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVT--------HIG-GDMFKSI 154 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~--------~~~-~d~~~~~ 154 (254)
..+++.++...++.+|||||||+|.++..+++.. ..+ ++++|+ +.|++.+++. +++. +.. .|+....
T Consensus 26 ~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g-~~~-V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (232)
T 3opn_A 26 EKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNG-AKL-VYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGR 103 (232)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSE-EEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCC
T ss_pred HHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcC-CCE-EEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCC
Confidence 3455555422346799999999999999999883 236 999999 8887764432 3332 222 2222111
Q ss_pred CCccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhh--hcccchHhhhhccccCceecCHH
Q 025363 155 PAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTR--ALLEGDIFVMTIYRAKGNHRTEQ 232 (254)
Q Consensus 155 p~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~t~~ 232 (254)
+ |.+.+..++..+ ..+|++++++|||||++++.- .+.... .+... .....+. .....+.+
T Consensus 104 ~--d~~~~D~v~~~l-----~~~l~~i~rvLkpgG~lv~~~--~p~~e~-~~~~~~~~G~~~d~--------~~~~~~~~ 165 (232)
T 3opn_A 104 P--SFTSIDVSFISL-----DLILPPLYEILEKNGEVAALI--KPQFEA-GREQVGKNGIIRDP--------KVHQMTIE 165 (232)
T ss_dssp C--SEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEE--CHHHHS-CHHHHC-CCCCCCH--------HHHHHHHH
T ss_pred C--CEEEEEEEhhhH-----HHHHHHHHHhccCCCEEEEEE--Cccccc-CHHHhCcCCeecCc--------chhHHHHH
Confidence 2 444444444433 578999999999999999852 110000 00000 0000000 01124788
Q ss_pred HHHHHHHhCCCCeeeEEE
Q 025363 233 EFKQLGFFAGFPHLRLYR 250 (254)
Q Consensus 233 e~~~ll~~aGf~~~~~~~ 250 (254)
++.++++++||++..+..
T Consensus 166 ~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 166 KVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp HHHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEEE
Confidence 999999999999887754
No 141
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=2.5e-12 Score=98.41 Aligned_cols=99 Identities=16% Similarity=0.122 Sum_probs=78.9
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCCC--
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA-- 156 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p~-- 156 (254)
+.+++.++ ..++.+|||+|||+|.++..+++ +..+ ++++|. +.+++.+++. ++++++.+|+.+.++.
T Consensus 25 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~--~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (183)
T 2yxd_A 25 AVSIGKLN-LNKDDVVVDVGCGSGGMTVEIAK--RCKF-VYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLE 100 (183)
T ss_dssp HHHHHHHC-CCTTCEEEEESCCCSHHHHHHHT--TSSE-EEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCC
T ss_pred HHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHh--cCCe-EEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCC
Confidence 34455553 66778999999999999999998 6677 999999 8888777653 5799999999876553
Q ss_pred ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 157 ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 157 ~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.|+|++..+ + ....++++++++ |||++++.+.
T Consensus 101 ~D~i~~~~~-~-----~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 101 FNKAFIGGT-K-----NIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp CSEEEECSC-S-----CHHHHHHHHHHT--TCCEEEEEES
T ss_pred CcEEEECCc-c-----cHHHHHHHHhhC--CCCEEEEEec
Confidence 499999887 2 235789999998 9999999663
No 142
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.34 E-value=3e-13 Score=109.41 Aligned_cols=95 Identities=18% Similarity=0.083 Sum_probs=77.6
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCC-----C-ccEEE
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP-----A-ADAIF 161 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p-----~-~D~v~ 161 (254)
..++.+|||||||+|..+..++..+|+.+ ++++|. +.+++.++++ .+|+++.+|+.+..+ + .|+|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELE-LVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEE
Confidence 35678999999999999999999999999 999999 8888777653 469999999866421 3 39999
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
++.+- ....+++.+.+.|||||++++...
T Consensus 157 s~a~~------~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 157 ARAVA------PLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp EESSC------CHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred ECCcC------CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 87542 235789999999999999998653
No 143
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.34 E-value=1.7e-12 Score=105.19 Aligned_cols=115 Identities=15% Similarity=0.161 Sum_probs=88.2
Q ss_pred HHHHHhcCCch----hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHH-cCCCCeEEEeec-hHHHhhCCCC------
Q 025363 73 MRKAMSGVSVP----FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQK-HRFICEGINFDL-PEVVAEAPSI------ 140 (254)
Q Consensus 73 ~~~~m~~~~~~----~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~~~~~~~~~~D~-~~~~~~~~~~------ 140 (254)
|...+...... ....+++.++ ..++.+|||+|||+|.++..+++. .|..+ ++++|. +.+++.+++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~-v~~~D~~~~~~~~a~~~~~~~~g 146 (258)
T 2pwy_A 69 YLLHMKRSATPTYPKDASAMVTLLD-LAPGMRVLEAGTGSGGLTLFLARAVGEKGL-VESYEARPHHLAQAERNVRAFWQ 146 (258)
T ss_dssp HHHHSCCSSCCCCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHHCC
T ss_pred HhhcCccccccccchHHHHHHHHcC-CCCCCEEEEECCCcCHHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHhcC
Confidence 44445443332 2345777774 788899999999999999999998 56778 999998 8887766542
Q ss_pred -CCcEEEeCCCCCC-CCC--ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 141 -PGVTHIGGDMFKS-IPA--ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 141 -~~i~~~~~d~~~~-~p~--~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+++++..+|+.+. ++. .|+|++. +++ ...++++++++|+|||++++...
T Consensus 147 ~~~v~~~~~d~~~~~~~~~~~D~v~~~-----~~~--~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 147 VENVRFHLGKLEEAELEEAAYDGVALD-----LME--PWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp CCCEEEEESCGGGCCCCTTCEEEEEEE-----SSC--GGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCEEEEECchhhcCCCCCCcCEEEEC-----CcC--HHHHHHHHHHhCCCCCEEEEEeC
Confidence 5799999999876 654 3999972 332 24789999999999999999764
No 144
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.34 E-value=3.5e-12 Score=103.11 Aligned_cols=110 Identities=16% Similarity=0.121 Sum_probs=84.6
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHH--cCCCCeEEEeec-hHHHhhCCCC---C-------C----------
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQK--HRFICEGINFDL-PEVVAEAPSI---P-------G---------- 142 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~--~~~~~~~~~~D~-~~~~~~~~~~---~-------~---------- 142 (254)
+.+++.+. ..+..+|||+|||+|.++..+++. .+..+ ++++|+ +.+++.++.+ . +
T Consensus 41 ~~~l~~~~-~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~-v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (250)
T 1o9g_A 41 QRALARLP-GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQ-VIASDVDPAPLELAAKNLALLSPAGLTARELERREQSER 118 (250)
T ss_dssp HHHHHTSS-CCSCEEEEETTCTTSHHHHHHHHHTGGGEEE-EEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcc-cCCCCeEEECCCCCCHHHHHHHHHhccCCCe-EEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhh
Confidence 33444442 335679999999999999999998 67777 999999 8888877632 2 2
Q ss_pred ---------------cE-------------EEeCCCCCCC------CC--ccEEEeccccccCC-------HHHHHHHHH
Q 025363 143 ---------------VT-------------HIGGDMFKSI------PA--ADAIFMKWVLTTWT-------DDECKLIME 179 (254)
Q Consensus 143 ---------------i~-------------~~~~d~~~~~------p~--~D~v~~~~vlh~~~-------~~~~~~il~ 179 (254)
++ |+.+|+++.. +. .|+|++...++... .+....+++
T Consensus 119 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~ 198 (250)
T 1o9g_A 119 FGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLR 198 (250)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHH
Confidence 67 9999998864 43 39999977665433 256779999
Q ss_pred HHHHhCCCCCEEEEEccc
Q 025363 180 NCYKALPAGGKLIACEPV 197 (254)
Q Consensus 180 ~~~~~L~pgG~l~i~d~~ 197 (254)
+++++|+|||+|++.+..
T Consensus 199 ~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 199 SLASALPAHAVIAVTDRS 216 (250)
T ss_dssp HHHHHSCTTCEEEEEESS
T ss_pred HHHHhcCCCcEEEEeCcc
Confidence 999999999999986544
No 145
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.33 E-value=1e-12 Score=106.93 Aligned_cols=97 Identities=16% Similarity=0.181 Sum_probs=77.4
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-CCC-c-cEEEeccccccCCHH
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IPA-A-DAIFMKWVLTTWTDD 172 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-~p~-~-D~v~~~~vlh~~~~~ 172 (254)
+..+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++...-.++.+|+.+. ++. . |+|++..+++++.++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~-v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFE-VVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCE-EEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCe-EEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc
Confidence 6789999999999999999987 457 999999 88888776542223888998765 444 3 999998876666333
Q ss_pred HHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 173 ECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 173 ~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
...+|++++++|||||++++....
T Consensus 131 -~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 131 -KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp -HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred -HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 679999999999999999987654
No 146
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.32 E-value=5e-12 Score=96.05 Aligned_cols=107 Identities=18% Similarity=0.206 Sum_probs=82.2
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeechHHHhhCCCCCCcEEEeCCCCCC---------CCC
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKS---------IPA 156 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~---------~p~ 156 (254)
.+++.+....++.+|||+|||+|.++..+++.+ ++.+ ++++|..++++. .++++..+|+.+. ++.
T Consensus 12 ~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~-v~~~D~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (180)
T 1ej0_A 12 EIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGR-IIACDLLPMDPI----VGVDFLQGDFRDELVMKALLERVGD 86 (180)
T ss_dssp HHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCE-EEEEESSCCCCC----TTEEEEESCTTSHHHHHHHHHHHTT
T ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCe-EEEEECcccccc----CcEEEEEcccccchhhhhhhccCCC
Confidence 344444335677899999999999999999995 6678 999999434322 6899999999875 343
Q ss_pred --ccEEEeccccccCCHHH---------HHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 157 --ADAIFMKWVLTTWTDDE---------CKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 157 --~D~v~~~~vlh~~~~~~---------~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
.|+|++...+|...... ...+++++.++|+|||++++.....
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 39999988887654321 1588999999999999999876543
No 147
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.32 E-value=2.8e-12 Score=101.29 Aligned_cols=97 Identities=13% Similarity=0.222 Sum_probs=75.5
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC---CCC-c-cEEEecc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IPA-A-DAIFMKW 164 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~---~p~-~-D~v~~~~ 164 (254)
++.+|||||||+|.++..+++.+|+.+ ++++|+ +.+++.++++ .++.++.+|+.+. ++. . |.|++..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~-v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDIN-YIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSE-EEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCC-EEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 467899999999999999999999999 999999 8888776542 5799999998763 343 2 8887654
Q ss_pred ccccCCHH-------HHHHHHHHHHHhCCCCCEEEEEc
Q 025363 165 VLTTWTDD-------ECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 165 vlh~~~~~-------~~~~il~~~~~~L~pgG~l~i~d 195 (254)
... |... ....+|++++++|||||+|++..
T Consensus 117 ~~p-~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 117 SDP-WPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CCC-CCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCC-CcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 322 2110 02578999999999999998864
No 148
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.32 E-value=6.4e-12 Score=99.15 Aligned_cols=98 Identities=16% Similarity=0.191 Sum_probs=77.4
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC---CCC--ccEEEecc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IPA--ADAIFMKW 164 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~---~p~--~D~v~~~~ 164 (254)
++.+|||||||+|.++..+++.+|+.+ ++++|+ +.+++.++++ +++.++.+|+.+. ++. .|+|++..
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~-v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDIN-YIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCC-EEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 467899999999999999999999988 999999 8888877653 5899999999863 333 39999876
Q ss_pred ccccCCHH------HHHHHHHHHHHhCCCCCEEEEEc
Q 025363 165 VLTTWTDD------ECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 165 vlh~~~~~------~~~~il~~~~~~L~pgG~l~i~d 195 (254)
........ ....++++++++|+|||.|++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 54311100 12479999999999999998854
No 149
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.32 E-value=2.8e-12 Score=100.76 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=82.4
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCC-C
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP-A 156 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p-~ 156 (254)
...+++.++ ..++.+|||||||+|..+..+++. ..+ ++++|+ +.+++.++++ ++++++.+|+.+..+ .
T Consensus 66 ~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~--~~~-v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 66 VARMTELLE-LTPQSRVLEIGTGSGYQTAILAHL--VQH-VCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHh--CCE-EEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccC
Confidence 445566664 778899999999999999999998 456 999999 8888777643 579999999988643 2
Q ss_pred --ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 157 --ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 157 --~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
.|+|++..++|++++ ++++.|||||+|++.-..
T Consensus 142 ~~~D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCEEEEEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred CCccEEEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 399999999998864 578999999999986543
No 150
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.31 E-value=1.5e-11 Score=95.91 Aligned_cols=104 Identities=22% Similarity=0.204 Sum_probs=77.8
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcC--CCCeEEEeechHHHhhCCCCCCcEEEeCCCCCCC----------
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHR--FICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSI---------- 154 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~~---------- 154 (254)
++.+.+..+.++.+|||+|||+|.++..++++++ +.+ ++++|+.++. ..++++++.+|+.+..
T Consensus 12 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~-v~gvD~s~~~----~~~~v~~~~~d~~~~~~~~~~~~~~i 86 (201)
T 2plw_A 12 ELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNK-IIGIDKKIMD----PIPNVYFIQGEIGKDNMNNIKNINYI 86 (201)
T ss_dssp HHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEE-EEEEESSCCC----CCTTCEEEECCTTTTSSCCC------
T ss_pred HHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCce-EEEEeCCccC----CCCCceEEEccccchhhhhhcccccc
Confidence 3455553356778999999999999999999988 678 9999994431 2367999999997653
Q ss_pred ----------------CC-c-cEEEeccccccCC----HHH-----HHHHHHHHHHhCCCCCEEEEEc
Q 025363 155 ----------------PA-A-DAIFMKWVLTTWT----DDE-----CKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 155 ----------------p~-~-D~v~~~~vlh~~~----~~~-----~~~il~~~~~~L~pgG~l~i~d 195 (254)
+. . |+|++...+|... +.. ..+++++++++|||||++++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 87 DNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp -----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 33 3 9999987776421 111 1358999999999999998844
No 151
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.31 E-value=8.2e-12 Score=99.00 Aligned_cols=118 Identities=15% Similarity=0.032 Sum_probs=95.0
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC-C--ccEEEec
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP-A--ADAIFMK 163 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p-~--~D~v~~~ 163 (254)
.+++.+|+|||||+|.++..+++..|..+ ++++|+ +.+++.++++ ++|++..+|.++.++ . .|+|++.
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~-V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~Ivia 97 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDF-AIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITIC 97 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEE-EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEe
Confidence 45678999999999999999999988778 999999 8888887754 579999999998844 2 4998876
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCC
Q 025363 164 WVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGF 243 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 243 (254)
.+. .+-...+|....+.|+++|+|++.-. ...++++++|.+.||
T Consensus 98 GmG----g~lI~~IL~~~~~~l~~~~~lIlqp~--------------------------------~~~~~lr~~L~~~Gf 141 (230)
T 3lec_A 98 GMG----GRLIADILNNDIDKLQHVKTLVLQPN--------------------------------NREDDLRKWLAANDF 141 (230)
T ss_dssp EEC----HHHHHHHHHHTGGGGTTCCEEEEEES--------------------------------SCHHHHHHHHHHTTE
T ss_pred CCc----hHHHHHHHHHHHHHhCcCCEEEEECC--------------------------------CChHHHHHHHHHCCC
Confidence 543 35577899999999999999887321 124567889999999
Q ss_pred CeeeEE
Q 025363 244 PHLRLY 249 (254)
Q Consensus 244 ~~~~~~ 249 (254)
.+++..
T Consensus 142 ~i~~E~ 147 (230)
T 3lec_A 142 EIVAED 147 (230)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 987754
No 152
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.31 E-value=1.4e-12 Score=107.18 Aligned_cols=103 Identities=19% Similarity=0.260 Sum_probs=83.2
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHH-cCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQK-HRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP 155 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p 155 (254)
...++..++ ..++.+|||+|||+|.++..+++. .|..+ ++++|. +.+++.++++ +++++..+|+.+.++
T Consensus 101 ~~~i~~~~~-~~~~~~VLDiG~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 178 (277)
T 1o54_A 101 SSFIAMMLD-VKEGDRIIDTGVGSGAMCAVLARAVGSSGK-VFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD 178 (277)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHTTTTCE-EEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS
T ss_pred HHHHHHHhC-CCCCCEEEEECCcCCHHHHHHHHHhCCCcE-EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc
Confidence 445677774 788899999999999999999999 57788 999998 8888776643 479999999987755
Q ss_pred C--ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 156 A--ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 156 ~--~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
. .|+|++. .+ +...+++++.++|+|||+|++.+.
T Consensus 179 ~~~~D~V~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 179 EKDVDALFLD-----VP--DPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp CCSEEEEEEC-----CS--CGGGTHHHHHHHEEEEEEEEEEES
T ss_pred CCccCEEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 4 3999972 22 224789999999999999999763
No 153
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.31 E-value=2.3e-12 Score=98.50 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=83.4
Q ss_pred CCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--CCcEEEeCCCCCC-C---CC-c-cEEEecc
Q 025363 94 GFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFKS-I---PA-A-DAIFMKW 164 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--~~i~~~~~d~~~~-~---p~-~-D~v~~~~ 164 (254)
..+++.+|||||||. . . +|. +.|++.+++. .+++++.+|+.+. . +. . |+|++..
T Consensus 9 g~~~g~~vL~~~~g~--------------v-~--vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS--------------S-P--VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGL 71 (176)
T ss_dssp TCCTTSEEEEEECTT--------------S-C--HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECC
T ss_pred CCCCCCEEEEecCCc--------------e-e--eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECC
Confidence 467889999999985 1 2 677 7788777653 3699999999765 3 44 3 9999999
Q ss_pred ccccC-CHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCC
Q 025363 165 VLTTW-TDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGF 243 (254)
Q Consensus 165 vlh~~-~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 243 (254)
++|++ ++. .++|++++++|||||+|++.+........ ....++.++|.++|+++||
T Consensus 72 ~l~~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 72 VPGSTTLHS--AEILAEIARILRPGGCLFLKEPVETAVDN---------------------NSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp STTCCCCCC--HHHHHHHHHHEEEEEEEEEEEEEESSSCS---------------------SSSSCCHHHHHHHHHHTTC
T ss_pred hhhhcccCH--HHHHHHHHHHCCCCEEEEEEccccccccc---------------------ccccCCHHHHHHHHHHCCC
Confidence 99998 543 68999999999999999996554321100 0122578999999999999
No 154
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.31 E-value=3.5e-12 Score=100.56 Aligned_cols=102 Identities=19% Similarity=0.157 Sum_probs=83.0
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCC-
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP- 155 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p- 155 (254)
...+++.+ ...++.+|||||||+|..+..+++.. |+.+ ++++|. +.+++.+++. +++++..+|+....+
T Consensus 66 ~~~~~~~~-~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 143 (215)
T 2yxe_A 66 VGMMCELL-DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGL-VVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP 143 (215)
T ss_dssp HHHHHHHT-TCCTTCEEEEECCTTSHHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG
T ss_pred HHHHHHhh-CCCCCCEEEEECCCccHHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCC
Confidence 34556666 36778899999999999999999988 5567 999999 8888777653 569999999866644
Q ss_pred C--ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 156 A--ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 156 ~--~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
. .|+|++..++|+++ ++++++|||||++++...
T Consensus 144 ~~~fD~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 144 LAPYDRIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp GCCEEEEEESSBBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred CCCeeEEEECCchHHHH--------HHHHHHcCCCcEEEEEEC
Confidence 2 39999999999875 378999999999998754
No 155
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.30 E-value=4e-12 Score=98.34 Aligned_cols=100 Identities=10% Similarity=-0.005 Sum_probs=80.7
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC---C-CC-ccEEEec
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---I-PA-ADAIFMK 163 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~---~-p~-~D~v~~~ 163 (254)
.++.+|||+|||+|.++..+++. +..+ ++++|+ +.+++.++++ ++++++.+|+.+. . ++ .|+|++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~ 120 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAAS-VLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLAD 120 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSE-EEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEEC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCe-EEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEEC
Confidence 45789999999999999988775 4456 999999 8888887754 4799999998775 2 23 3999998
Q ss_pred cccccCCHHHHHHHHHHHHH--hCCCCCEEEEEcccc
Q 025363 164 WVLTTWTDDECKLIMENCYK--ALPAGGKLIACEPVL 198 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~--~L~pgG~l~i~d~~~ 198 (254)
..+|. ..++..++++++.+ +|+|||++++.....
T Consensus 121 ~p~~~-~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 121 PPYNV-DSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp CCTTS-CHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCCCc-chhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 87764 34677899999999 999999999976544
No 156
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.30 E-value=1.7e-12 Score=102.98 Aligned_cols=100 Identities=17% Similarity=0.270 Sum_probs=79.6
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC---CC-----C-c
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS---IP-----A-A 157 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~---~p-----~-~ 157 (254)
.+..+|||||||+|..+..+++.++ +.+ ++.+|+ +.+++.++++ ++|+++.+|+.+. .+ + .
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGAR-LLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCE-EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCE-EEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 3578999999999999999999875 677 999999 8888887653 4799999997542 22 2 3
Q ss_pred cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 158 DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 158 D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
|+|++....+++ ....++++.+ +.|||||+|++.+...+
T Consensus 136 D~V~~d~~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~~~~ 174 (221)
T 3u81_A 136 DMVFLDHWKDRY--LPDTLLLEKC-GLLRKGTVLLADNVIVP 174 (221)
T ss_dssp SEEEECSCGGGH--HHHHHHHHHT-TCCCTTCEEEESCCCCC
T ss_pred EEEEEcCCcccc--hHHHHHHHhc-cccCCCeEEEEeCCCCc
Confidence 999998877765 3345678888 99999999998776643
No 157
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.30 E-value=8.1e-12 Score=100.18 Aligned_cols=93 Identities=18% Similarity=0.109 Sum_probs=75.8
Q ss_pred CCeEEEecCcccHHHHHHHHH----cCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCC-----CCC--ccEEEecc
Q 025363 98 VKRLVDVGGSAGDCLRMILQK----HRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-----IPA--ADAIFMKW 164 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~----~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~-----~p~--~D~v~~~~ 164 (254)
..+|||||||+|..+..+++. .|+.+ ++++|+ +.+++.++.. ++|+++.+|+.+. .+. .|+|++..
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~-V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQ-VIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCE-EEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCE-EEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 579999999999999999998 67888 999999 8888777542 6899999999873 233 39988755
Q ss_pred ccccCCHHHHHHHHHHHHH-hCCCCCEEEEEcc
Q 025363 165 VLTTWTDDECKLIMENCYK-ALPAGGKLIACEP 196 (254)
Q Consensus 165 vlh~~~~~~~~~il~~~~~-~L~pgG~l~i~d~ 196 (254)
. |. +...+|+++.+ .|||||+|++.+.
T Consensus 161 ~-~~----~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 161 A-HA----NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp S-CS----SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred c-hH----hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 4 42 34678999997 9999999999764
No 158
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.29 E-value=2.2e-12 Score=109.38 Aligned_cols=106 Identities=15% Similarity=0.095 Sum_probs=83.8
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCCCCC-CCCc
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IPAA 157 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~~~~-~p~~ 157 (254)
+.+.+.+. ..++.+|||||||+|.++..++++ +..+ ++++|..++++.+++. ++|+++.+|+.+. .++.
T Consensus 40 ~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~-V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 40 RAILQNHT-DFKDKIVLDVGCGSGILSFFAAQA-GARK-IYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHHHHTGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSE-EEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHhccc-cCCcCEEEEcCCCccHHHHHHHhC-CCCE-EEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCc
Confidence 44555553 556789999999999999998886 4457 9999984466555432 6799999999875 5554
Q ss_pred -cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 158 -DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 158 -D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
|+|++..+++++..+.....+.++++.|||||++++.
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred eeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 9999998888887777778889999999999999854
No 159
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.29 E-value=1.9e-12 Score=101.53 Aligned_cols=92 Identities=12% Similarity=0.058 Sum_probs=75.9
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCCC-c-cEEEeccccc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA-A-DAIFMKWVLT 167 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p~-~-D~v~~~~vlh 167 (254)
++.+|||+|||+|..+..+++.+|+.+ ++++|. +.+++.++.. .++++..+|+.+..+. . |+|++..+ +
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~-~ 142 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAH-FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF-A 142 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS-S
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc-C
Confidence 467999999999999999999999888 999999 8887776542 4599999999876543 3 99997543 3
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
+ ...++++++++|+|||++++..
T Consensus 143 ~-----~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 143 S-----LNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp S-----HHHHHHHHTTSEEEEEEEEEEE
T ss_pred C-----HHHHHHHHHHhcCCCcEEEEEe
Confidence 2 3589999999999999999864
No 160
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.28 E-value=1.8e-12 Score=103.71 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=80.3
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC----Cc-cEEE
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP----AA-DAIF 161 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p----~~-D~v~ 161 (254)
..+..+|||||||+|..+..+++..|+.+ ++++|+ +.+++.+++. ++|+++.+|+.+..+ .. |+|+
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~ 147 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIH-VTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIF 147 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCE-EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEE
Confidence 34578999999999999999999888888 999999 8888877653 489999999987644 33 9999
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
+.... .....+++++.+.|||||+|++.+....
T Consensus 148 ~~~~~-----~~~~~~l~~~~~~LkpgG~lv~d~~~~~ 180 (232)
T 3ntv_A 148 IDAAK-----AQSKKFFEIYTPLLKHQGLVITDNVLYH 180 (232)
T ss_dssp EETTS-----SSHHHHHHHHGGGEEEEEEEEEECTTGG
T ss_pred EcCcH-----HHHHHHHHHHHHhcCCCeEEEEeeCCcC
Confidence 75433 3346799999999999999988665543
No 161
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.28 E-value=5.9e-12 Score=103.47 Aligned_cols=121 Identities=15% Similarity=0.040 Sum_probs=93.1
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCCC--ccEEEecc
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA--ADAIFMKW 164 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p~--~D~v~~~~ 164 (254)
.+++.+|||+|||+|.++..+++..+. + ++++|+ +.+++.++++ ++++++.+|+.+..+. .|+|++..
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~-~-V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~ 200 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA-K-VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGY 200 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC-E-EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC-E-EEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECC
Confidence 346789999999999999999999766 7 999999 8888877643 4699999999887443 39999854
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCC
Q 025363 165 VLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFP 244 (254)
Q Consensus 165 vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 244 (254)
... ...+++++.++|+|||++++.+...... ......+++.+.++++||+
T Consensus 201 p~~------~~~~l~~~~~~LkpgG~l~~~~~~~~~~------------------------~~~~~~~~i~~~~~~~G~~ 250 (278)
T 2frn_A 201 VVR------THEFIPKALSIAKDGAIIHYHNTVPEKL------------------------MPREPFETFKRITKEYGYD 250 (278)
T ss_dssp CSS------GGGGHHHHHHHEEEEEEEEEEEEEEGGG------------------------TTTTTHHHHHHHHHHTTCE
T ss_pred chh------HHHHHHHHHHHCCCCeEEEEEEeecccc------------------------ccccHHHHHHHHHHHcCCe
Confidence 422 2578999999999999999987643110 0012456778899999998
Q ss_pred eee
Q 025363 245 HLR 247 (254)
Q Consensus 245 ~~~ 247 (254)
...
T Consensus 251 ~~~ 253 (278)
T 2frn_A 251 VEK 253 (278)
T ss_dssp EEE
T ss_pred eEE
Confidence 655
No 162
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.27 E-value=1.6e-11 Score=98.19 Aligned_cols=118 Identities=13% Similarity=0.078 Sum_probs=93.8
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC-C--ccEEEec
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP-A--ADAIFMK 163 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p-~--~D~v~~~ 163 (254)
.+++.+|+|||||+|.+++.+++..|..+ ++++|+ +.+++.++++ ++|++..+|.++.++ . .|+|++.
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~-V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Ivia 97 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASF-AIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIA 97 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEE-EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEe
Confidence 35678999999999999999999988778 999999 8888887754 579999999998854 2 4998875
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCC
Q 025363 164 WVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGF 243 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 243 (254)
.+ ..+-...+|.+..+.|+++++|++.-. .....++++|.+.||
T Consensus 98 gm----Gg~lI~~IL~~~~~~L~~~~~lIlq~~--------------------------------~~~~~lr~~L~~~Gf 141 (244)
T 3gnl_A 98 GM----GGTLIRTILEEGAAKLAGVTKLILQPN--------------------------------IAAWQLREWSEQNNW 141 (244)
T ss_dssp EE----CHHHHHHHHHHTGGGGTTCCEEEEEES--------------------------------SCHHHHHHHHHHHTE
T ss_pred CC----chHHHHHHHHHHHHHhCCCCEEEEEcC--------------------------------CChHHHHHHHHHCCC
Confidence 44 335577899999999999999888431 124467788999999
Q ss_pred CeeeEE
Q 025363 244 PHLRLY 249 (254)
Q Consensus 244 ~~~~~~ 249 (254)
.+++..
T Consensus 142 ~i~~E~ 147 (244)
T 3gnl_A 142 LITSEA 147 (244)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 876543
No 163
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.27 E-value=3.2e-12 Score=101.46 Aligned_cols=99 Identities=16% Similarity=0.109 Sum_probs=79.3
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC-------C-c
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP-------A-A 157 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p-------~-~ 157 (254)
..+..+|||||||+|..+..+++.+| +.+ ++++|+ +.+++.++++ ++++++.+|+.+..+ . .
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGR-VVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCc
Confidence 34578999999999999999999998 678 999999 8888776542 479999999876422 2 4
Q ss_pred cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 158 DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 158 D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
|+|++.... .....+++++.++|+|||.|++.+...+
T Consensus 135 D~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 135 DFIFIDADK-----QNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp SEEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred CEEEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 999976542 3446899999999999999888776554
No 164
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.27 E-value=8.3e-12 Score=100.06 Aligned_cols=98 Identities=10% Similarity=0.148 Sum_probs=73.3
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCC------------CCCCcEEEeCCCCCC----CCCc-
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAP------------SIPGVTHIGGDMFKS----IPAA- 157 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~------------~~~~i~~~~~d~~~~----~p~~- 157 (254)
.+..+|||||||+|.++..+++.+|+.. ++++|+ +.+++.++ ...+|.++.+|+.+. ++.+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~-v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTL-ILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSE-EEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCe-EEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 4567899999999999999999999988 999999 88876442 226799999999873 3333
Q ss_pred -cEEEeccccccCCHH---H----HHHHHHHHHHhCCCCCEEEEEc
Q 025363 158 -DAIFMKWVLTTWTDD---E----CKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 158 -D~v~~~~vlh~~~~~---~----~~~il~~~~~~L~pgG~l~i~d 195 (254)
|.|++...-. |... . ...+|++++++|||||+|++..
T Consensus 124 ~D~v~~~~~dp-~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 124 LTKMFFLFPDP-HFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEEEESCC------------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeCCCc-hhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 8887643321 1110 0 1379999999999999998863
No 165
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.26 E-value=9.9e-12 Score=99.05 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=81.5
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCCCC--C-
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKSIP--A- 156 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~~p--~- 156 (254)
...+++.+. ..++.+|||||||+|.++..+++.. .+ ++++|. +.+++.+++. .+++++.+|+.+..+ .
T Consensus 59 ~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~--~~-v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~ 134 (231)
T 1vbf_A 59 GIFMLDELD-LHKGQKVLEIGTGIGYYTALIAEIV--DK-VVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKP 134 (231)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHS--SE-EEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCC
T ss_pred HHHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHHc--CE-EEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCC
Confidence 445666663 6778899999999999999999986 56 999998 8888777653 279999999987533 2
Q ss_pred ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 157 ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 157 ~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.|+|++..++|++.+ ++.++|+|||++++...
T Consensus 135 fD~v~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 135 YDRVVVWATAPTLLC--------KPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEEC
T ss_pred ccEEEECCcHHHHHH--------HHHHHcCCCcEEEEEEc
Confidence 399999999998853 58899999999999864
No 166
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.25 E-value=4.8e-11 Score=102.08 Aligned_cols=96 Identities=9% Similarity=-0.065 Sum_probs=79.1
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCCC-----ccEEEecc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA-----ADAIFMKW 164 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p~-----~D~v~~~~ 164 (254)
++.+|||+| |+|.++..+++..++.+ ++++|+ +.+++.++++ .+|+++.+|+.+.+|. .|+|++..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~-v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKR-IAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSE-EEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 568999999 99999999999888778 999999 8998887754 3799999999885442 39999987
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 165 VLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 165 vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
.++.. ....++++++++|||||++++.+..
T Consensus 250 p~~~~---~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 250 PETLE---AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp CSSHH---HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CCchH---HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 77643 3578999999999999976555543
No 167
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.24 E-value=1.1e-11 Score=103.69 Aligned_cols=103 Identities=18% Similarity=0.280 Sum_probs=83.8
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCC-
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP- 155 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p- 155 (254)
...+++.++ ..++.+|||||||+|.++..+++..+ +.+ ++++|+ +++++.++++ ++++++.+|+.+..+
T Consensus 64 ~~~l~~~l~-~~~~~~VLDiGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~ 141 (317)
T 1dl5_A 64 MALFMEWVG-LDKGMRVLEIGGGTGYNAAVMSRVVGEKGL-VVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE 141 (317)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHhcC-CCCcCEEEEecCCchHHHHHHHHhcCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc
Confidence 445666664 77889999999999999999999987 477 999999 8888777643 469999999987533
Q ss_pred -C-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 156 -A-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 156 -~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
. .|+|++..++|++. +++.+.|||||++++....
T Consensus 142 ~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 142 FSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp GCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBCB
T ss_pred CCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEECC
Confidence 2 39999999999875 4678899999999997543
No 168
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.24 E-value=8.9e-12 Score=105.86 Aligned_cols=103 Identities=11% Similarity=0.088 Sum_probs=78.8
Q ss_pred HHHHhhcCCCCCCCeEEEecCc------ccHHHHHHHHH-cCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-CC-
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGS------AGDCLRMILQK-HRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IP- 155 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G------~G~~~~~l~~~-~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-~p- 155 (254)
+.++..+. .+..+||||||| +|..+..++++ +|+.+ ++++|+ +.+.. ..++|+|+.+|+.+. +.
T Consensus 207 e~lL~~l~--~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~-V~GVDiSp~m~~---~~~rI~fv~GDa~dlpf~~ 280 (419)
T 3sso_A 207 DRHFRDYR--NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQ-IYGLDIMDKSHV---DELRIRTIQGDQNDAEFLD 280 (419)
T ss_dssp HHHHGGGT--TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCE-EEEEESSCCGGG---CBTTEEEEECCTTCHHHHH
T ss_pred HHHHHhhc--CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCE-EEEEECCHHHhh---cCCCcEEEEecccccchhh
Confidence 34444442 346899999999 77777777766 58888 999999 77632 337899999999874 33
Q ss_pred ------C-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 156 ------A-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 156 ------~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
+ .|+|++. ..|++ .+..+.|++++++|||||++++.|..
T Consensus 281 ~l~~~d~sFDlVisd-gsH~~--~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 281 RIARRYGPFDIVIDD-GSHIN--AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHHHHCCEEEEEEC-SCCCH--HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred hhhcccCCccEEEEC-Ccccc--hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 3 3999986 45655 45678999999999999999998876
No 169
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.24 E-value=1.8e-11 Score=102.37 Aligned_cols=125 Identities=15% Similarity=0.095 Sum_probs=87.6
Q ss_pred HHHHHHhcCCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC------CCc
Q 025363 72 LMRKAMSGVSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI------PGV 143 (254)
Q Consensus 72 ~~~~~m~~~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~------~~i 143 (254)
.|..+..........-+...++ ..++.+|||+|||+|..+..+++..+ ..+ ++++|+ +.+++.++++ .++
T Consensus 94 ~~~~G~~~~qd~~s~l~~~~l~-~~~g~~VLDlg~G~G~~t~~la~~~~~~~~-v~avD~s~~~l~~a~~~~~~~g~~~v 171 (315)
T 1ixk_A 94 EFLTGLIYIQEASSMYPPVALD-PKPGEIVADMAAAPGGKTSYLAQLMRNDGV-IYAFDVDENRLRETRLNLSRLGVLNV 171 (315)
T ss_dssp HHHTTSEEECCHHHHHHHHHHC-CCTTCEEEECCSSCSHHHHHHHHHTTTCSE-EEEECSCHHHHHHHHHHHHHHTCCSE
T ss_pred hHhcceEEEeCHHHHHHHHHhC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCE-EEEEcCCHHHHHHHHHHHHHhCCCeE
Confidence 3444333333333333445553 67788999999999999999999875 467 999999 8888776653 479
Q ss_pred EEEeCCCCCC--CCC-ccEEEec------ccccc-------CCHHHH-------HHHHHHHHHhCCCCCEEEEEcccc
Q 025363 144 THIGGDMFKS--IPA-ADAIFMK------WVLTT-------WTDDEC-------KLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 144 ~~~~~d~~~~--~p~-~D~v~~~------~vlh~-------~~~~~~-------~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
.++.+|+.+. .+. .|+|++. .+++. |+.++. .++|+++.+.|||||+|++.....
T Consensus 172 ~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 172 ILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 9999998765 233 3999973 23332 332221 589999999999999999976544
No 170
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.24 E-value=9.7e-12 Score=101.19 Aligned_cols=100 Identities=14% Similarity=0.136 Sum_probs=76.7
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----------CCcEEEeCCCCCC--------CC
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----------PGVTHIGGDMFKS--------IP 155 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----------~~i~~~~~d~~~~--------~p 155 (254)
..+..+|||+|||+|..+..+++++|+.+ ++++|+ +.+++.++++ ++++++.+|+.+. ++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~-v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 112 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAE-VTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLP 112 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEE-EEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCC
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccC
Confidence 55678999999999999999999999888 999999 8777665432 2699999999876 22
Q ss_pred C--ccEEEecccccc----------------CCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 156 A--ADAIFMKWVLTT----------------WTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 156 ~--~D~v~~~~vlh~----------------~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
. .|+|++.-.++. ........+++.+.++|||||++++.-
T Consensus 113 ~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 113 DEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 3 399999633321 112235689999999999999998853
No 171
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.24 E-value=4.1e-12 Score=101.56 Aligned_cols=99 Identities=12% Similarity=0.180 Sum_probs=80.7
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC---C--CC-ccEE
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS---I--PA-ADAI 160 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~---~--p~-~D~v 160 (254)
..+..+|||||||+|..+..+++.+|+.+ ++++|. +.+++.+++. ++++++.+|+.+. . +. .|+|
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEAT-IVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCE-EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEE
Confidence 34577999999999999999999998888 999999 8888777643 4799999999874 2 23 3999
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 161 FMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 161 ~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
++....+ ....+++++.++|+|||+|++.+....
T Consensus 131 ~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~~ 164 (233)
T 2gpy_A 131 FIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNVLFR 164 (233)
T ss_dssp EEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETTTC-
T ss_pred EECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcCCcC
Confidence 9877654 346889999999999999999876543
No 172
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.23 E-value=2.5e-12 Score=102.18 Aligned_cols=98 Identities=16% Similarity=0.093 Sum_probs=78.8
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC--------C-c
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP--------A-A 157 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p--------~-~ 157 (254)
.+..+|||||||+|..+..+++.+| +.+ ++++|. +.+++.+++. ++++++.+|+.+..+ . .
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGT-LITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCE-EEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 3467999999999999999999988 677 999999 8888776643 569999999866421 3 3
Q ss_pred cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 158 DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 158 D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
|+|++... ......+++++.++|||||+|++.+...+
T Consensus 142 D~v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 142 DLIYIDAD-----KANTDLYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp EEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred cEEEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 99996543 23456899999999999999999877654
No 173
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.23 E-value=8.5e-12 Score=95.32 Aligned_cols=110 Identities=8% Similarity=0.044 Sum_probs=81.3
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC---
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS--- 153 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~--- 153 (254)
.+.+++.+....+..+|||+|||+|.++..+++. +..+ ++++|+ +.+++.++++ ++++++.+|+.+.
T Consensus 19 ~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (177)
T 2esr_A 19 RGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-GMSA-AVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC 96 (177)
T ss_dssp HHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-TCCE-EEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH
T ss_pred HHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-CCCE-EEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHh
Confidence 3344444422456789999999999999999987 5567 999999 8888877643 3699999999774
Q ss_pred CCC-ccEEEeccccccCCHHHHHHHHHHHH--HhCCCCCEEEEEccccC
Q 025363 154 IPA-ADAIFMKWVLTTWTDDECKLIMENCY--KALPAGGKLIACEPVLP 199 (254)
Q Consensus 154 ~p~-~D~v~~~~vlh~~~~~~~~~il~~~~--~~L~pgG~l~i~d~~~~ 199 (254)
.+. .|+|++...++. ....++++.+. ++|+|||++++......
T Consensus 97 ~~~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 97 LTGRFDLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp BCSCEEEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred hcCCCCEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 233 399999776642 34456777776 99999999998765443
No 174
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.22 E-value=2e-11 Score=103.12 Aligned_cols=102 Identities=21% Similarity=0.263 Sum_probs=78.2
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCCCCC-CC-C
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IP-A 156 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~~~~-~p-~ 156 (254)
+.+.+... ..++.+|||||||+|.++..++++ +..+ ++++|..++++.+++. ++|+++.+|+.+. +| +
T Consensus 54 ~~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~-v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 130 (340)
T 2fyt_A 54 DFIYQNPH-IFKDKVVLDVGCGTGILSMFAAKA-GAKK-VLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVE 130 (340)
T ss_dssp HHHHHCGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSE-EEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCS
T ss_pred HHHHhhhh-hcCCCEEEEeeccCcHHHHHHHHc-CCCE-EEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCC
Confidence 44555443 566889999999999999999887 3446 9999994477766542 6899999999875 55 3
Q ss_pred c-cEEEecc---ccccCCHHHHHHHHHHHHHhCCCCCEEE
Q 025363 157 A-DAIFMKW---VLTTWTDDECKLIMENCYKALPAGGKLI 192 (254)
Q Consensus 157 ~-D~v~~~~---vlh~~~~~~~~~il~~~~~~L~pgG~l~ 192 (254)
. |+|++.. .+++ ......+|++++++|||||+++
T Consensus 131 ~~D~Ivs~~~~~~l~~--~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 131 KVDVIISEWMGYFLLF--ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CEEEEEECCCBTTBTT--TCHHHHHHHHHHHHEEEEEEEE
T ss_pred cEEEEEEcCchhhccC--HHHHHHHHHHHHhhcCCCcEEE
Confidence 3 9999866 3433 2456789999999999999987
No 175
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.22 E-value=1.7e-11 Score=104.94 Aligned_cols=96 Identities=13% Similarity=0.066 Sum_probs=80.7
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCCC-C-C-ccEEEeccccc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSI-P-A-ADAIFMKWVLT 167 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~~-p-~-~D~v~~~~vlh 167 (254)
++.+|||+|||+|.++..+++. +.+ ++++|. +.+++.++++ .+++++.+|+.+.. + + .|+|++...+|
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~-V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAE-VVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCE-EEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCE-EEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchh
Confidence 5679999999999999999988 457 999999 8888877654 25899999998874 3 2 39999999988
Q ss_pred c---CCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 168 T---WTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 168 ~---~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
+ ...+...++++++++.|||||++++..
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 6 334677899999999999999999864
No 176
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.21 E-value=2.2e-11 Score=100.37 Aligned_cols=94 Identities=14% Similarity=0.134 Sum_probs=75.3
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC-Cc---cEEEec-
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP-AA---DAIFMK- 163 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p-~~---D~v~~~- 163 (254)
+..+|||+|||+|..+..+++. |+.+ ++++|+ +.+++.++++ ++++|+.+|+++..+ .. |+|+++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~-v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnP 200 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAI-VFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNP 200 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCE-EEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECC
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCE-EEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcC
Confidence 4679999999999999999999 8889 999999 8888877653 369999999998643 46 999985
Q ss_pred -----------cccccCCHH------HHHHHHHHHH-HhCCCCCEEEE
Q 025363 164 -----------WVLTTWTDD------ECKLIMENCY-KALPAGGKLIA 193 (254)
Q Consensus 164 -----------~vlh~~~~~------~~~~il~~~~-~~L~pgG~l~i 193 (254)
.+. +.+.. +...+++++. +.|+|||+|++
T Consensus 201 Pyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 201 PYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp CCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred CCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 233 22211 1227899999 99999999987
No 177
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.21 E-value=1e-11 Score=105.25 Aligned_cols=97 Identities=20% Similarity=0.205 Sum_probs=75.7
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCCCCC-CCC-c-cEEEecc
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IPA-A-DAIFMKW 164 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~~~~-~p~-~-D~v~~~~ 164 (254)
..++.+|||||||+|.++..++++ +..+ ++++|..++++.+++. ++|+++.+|+.+. +|. . |+|++..
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~~~-v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GARK-VIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW 141 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TCSE-EEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CCCE-EEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcc
Confidence 345789999999999999999988 4457 9999995577666542 5699999999886 563 3 9999876
Q ss_pred ccccC-CHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 165 VLTTW-TDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 165 vlh~~-~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
+.+.+ .......+++++.++|||||+++.
T Consensus 142 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 142 MGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 54433 224567899999999999999874
No 178
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.21 E-value=9.3e-12 Score=100.40 Aligned_cols=98 Identities=11% Similarity=0.192 Sum_probs=71.9
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC--------------CCCcEEEeCCCCCCCC----
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS--------------IPGVTHIGGDMFKSIP---- 155 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~--------------~~~i~~~~~d~~~~~p---- 155 (254)
.+++.+|||||||+|.++..+++.+|+.. ++++|+ +.+++.+++ ..++.++.+|+++.++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDL-ILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSE-EEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCC-EEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc
Confidence 34678999999999999999999999888 999998 777765432 2579999999987432
Q ss_pred Cc--cEEEeccccccCCHHH-------HHHHHHHHHHhCCCCCEEEEE
Q 025363 156 AA--DAIFMKWVLTTWTDDE-------CKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 156 ~~--D~v~~~~vlh~~~~~~-------~~~il~~~~~~L~pgG~l~i~ 194 (254)
.. |.|++...- -|.... ...+++++.++|+|||+|++.
T Consensus 126 ~~~~d~v~~~~p~-p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 126 KGQLSKMFFCFPD-PHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp TTCEEEEEEESCC-CC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCEEEEECCC-cccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 22 666642110 111000 037999999999999999985
No 179
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.21 E-value=1.7e-11 Score=99.93 Aligned_cols=93 Identities=18% Similarity=0.234 Sum_probs=77.2
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCC-CCC-c-cEEEeccccccCC
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPA-A-DAIFMKWVLTTWT 170 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~-~p~-~-D~v~~~~vlh~~~ 170 (254)
.++.+|||||||+|.++..+++..|+.+ ++++|+ +.+++.+++. +++.+..+|+.+. ++. . |+|++..+.+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~--- 159 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEIT-TFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPC--- 159 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSE-EEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCC---
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCChh---
Confidence 4678999999999999999999988888 999999 8888877654 6799999998764 443 3 9999866532
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 171 DDECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 171 ~~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
.+++++++|||||++++.++..
T Consensus 160 ------~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 160 ------KAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp ------CHHHHHHHEEEEEEEEEEEECT
T ss_pred ------hHHHHHHhcCCCcEEEEEEcCH
Confidence 4789999999999999987643
No 180
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.21 E-value=3.6e-12 Score=102.62 Aligned_cols=98 Identities=13% Similarity=0.052 Sum_probs=78.7
Q ss_pred CCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCC--------CC-cc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI--------PA-AD 158 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~--------p~-~D 158 (254)
+..+|||||||+|..+..+++.+| +.+ ++.+|+ +.+++.++++ ++|+++.+|+.+.+ ++ .|
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQ-VITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCE-EEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 467999999999999999999986 677 999999 8777666543 58999999997642 23 39
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCC
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 200 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~ 200 (254)
+|++... ......+++++.++|||||.|++.+.....
T Consensus 139 ~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 139 FIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred EEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 9988654 234567899999999999999998776543
No 181
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.20 E-value=1.2e-11 Score=106.02 Aligned_cols=108 Identities=16% Similarity=0.137 Sum_probs=81.9
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCCCCC-CCCc-
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IPAA- 157 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~~~~-~p~~- 157 (254)
.+.+.. ...++.+|||||||+|.++..++++. ..+ ++++|...+++.+++. ++|+++.+|+.+. +++.
T Consensus 54 ~i~~~~-~~~~~~~VLDlGcGtG~ls~~la~~g-~~~-V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 130 (376)
T 3r0q_C 54 AVFQNK-HHFEGKTVLDVGTGSGILAIWSAQAG-ARK-VYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKV 130 (376)
T ss_dssp HHHTTT-TTTTTCEEEEESCTTTHHHHHHHHTT-CSE-EEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCE
T ss_pred HHHhcc-ccCCCCEEEEeccCcCHHHHHHHhcC-CCE-EEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcc
Confidence 344444 35678899999999999999999883 236 9999987666655432 5699999999876 5544
Q ss_pred cEEEeccccccCCH-HHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 158 DAIFMKWVLTTWTD-DECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 158 D~v~~~~vlh~~~~-~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
|+|++..+.|.... .....+++++.+.|||||.+++.+..
T Consensus 131 D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 131 DVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp EEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred eEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 99999766665432 34678999999999999999876544
No 182
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.20 E-value=1.7e-11 Score=101.39 Aligned_cols=99 Identities=18% Similarity=0.238 Sum_probs=72.8
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC-----------CCCcEEEeCCCCCCCC---C-ccE
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS-----------IPGVTHIGGDMFKSIP---A-ADA 159 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~-----------~~~i~~~~~d~~~~~p---~-~D~ 159 (254)
.+..+|||||||+|..+..+++..+..+ ++++|+ +.+++.+++ .+|++++.+|..+.++ + .|+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~-V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVES-ITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCE-EEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 3467999999999999999999877777 999999 888876653 2589999999987632 2 399
Q ss_pred EEeccccccCCHHHH--HHHHHHHHHhCCCCCEEEEEc
Q 025363 160 IFMKWVLTTWTDDEC--KLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 160 v~~~~vlh~~~~~~~--~~il~~~~~~L~pgG~l~i~d 195 (254)
|++...-+.-+.... .+++++++++|+|||.|++..
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 999544332222222 679999999999999999864
No 183
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.20 E-value=9.4e-12 Score=103.29 Aligned_cols=98 Identities=20% Similarity=0.194 Sum_probs=77.6
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC---CC-C-ccEEEeccc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IP-A-ADAIFMKWV 165 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~---~p-~-~D~v~~~~v 165 (254)
..+|||||||+|.++..+++.+|+.+ ++++|+ +.+++.++++ +|++++.+|..+. .+ + .|+|++...
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~-v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSR-NTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVF 168 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCE-EEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcE-EEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCC
Confidence 35999999999999999999999998 999999 8888877642 6899999998764 23 3 399998644
Q ss_pred cccCCHHH--HHHHHHHHHHhCCCCCEEEEEcc
Q 025363 166 LTTWTDDE--CKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 166 lh~~~~~~--~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.+...... ..+++++++++|+|||.|++.-.
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 43322111 25899999999999999988654
No 184
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.20 E-value=1.4e-11 Score=94.66 Aligned_cols=100 Identities=7% Similarity=-0.040 Sum_probs=75.8
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCC------CCc-cE
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI------PAA-DA 159 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~------p~~-D~ 159 (254)
..++.+|||+|||+|.++..+++. +..+ ++++|+ +.+++.++.+ ++++++.+|+.+.. ++. |+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~-~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSR-GMDK-SICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHT-TCSE-EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hcCCCCEEEeCCccCHHHHHHHHc-CCCE-EEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 346789999999999999998874 4557 999999 8888877653 46999999997742 233 99
Q ss_pred EEeccccccCCHHHHHHHHHHH--HHhCCCCCEEEEEccccC
Q 025363 160 IFMKWVLTTWTDDECKLIMENC--YKALPAGGKLIACEPVLP 199 (254)
Q Consensus 160 v~~~~vlh~~~~~~~~~il~~~--~~~L~pgG~l~i~d~~~~ 199 (254)
|++...++.... ..+++.+ .++|+|||++++......
T Consensus 120 i~~~~~~~~~~~---~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 120 VLLDPPYAKQEI---VSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp EEECCCGGGCCH---HHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EEECCCCCchhH---HHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 999877653333 3455566 888999999998765443
No 185
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.19 E-value=1.1e-11 Score=98.35 Aligned_cols=97 Identities=16% Similarity=0.199 Sum_probs=76.9
Q ss_pred CCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC--------CCcEEEeCCCCCC---C-CCc-cEEE
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI--------PGVTHIGGDMFKS---I-PAA-DAIF 161 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~--------~~i~~~~~d~~~~---~-p~~-D~v~ 161 (254)
+..+|||||||+|..+..+++.+| +.+ ++.+|. +.+++.++++ ++|+++.+|+.+. + ++. |+|+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTT-LTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSE-EEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 345999999999999999999876 677 999999 8888777642 3799999998764 2 233 9999
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
+..... ....+++++.+.|||||.|++.+..+.
T Consensus 135 ~d~~~~-----~~~~~l~~~~~~LkpGG~lv~dn~~~~ 167 (221)
T 3dr5_A 135 GQVSPM-----DLKALVDAAWPLLRRGGALVLADALLD 167 (221)
T ss_dssp ECCCTT-----THHHHHHHHHHHEEEEEEEEETTTTGG
T ss_pred EcCcHH-----HHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 865433 345789999999999999999666543
No 186
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.18 E-value=1.1e-11 Score=99.40 Aligned_cols=99 Identities=18% Similarity=0.150 Sum_probs=78.3
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC----------
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP---------- 155 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p---------- 155 (254)
..+..+|||||||+|..+..+++.+| ..+ ++++|. +.+++.+++. ++++++.+|+.+..+
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGK-ILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCE-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence 34577999999999999999999987 567 999999 8887776643 459999999865311
Q ss_pred ---------C-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 156 ---------A-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 156 ---------~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
. .|+|++.... +....+++++.++|+|||+|++.+...+
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 185 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADK-----ENYPNYYPLILKLLKPGGLLIADNVLWD 185 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred ccccccCCCCCcCEEEEeCCH-----HHHHHHHHHHHHHcCCCeEEEEEccccC
Confidence 3 3999987543 3446889999999999999999775543
No 187
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.17 E-value=7.9e-11 Score=91.30 Aligned_cols=104 Identities=21% Similarity=0.290 Sum_probs=75.4
Q ss_pred HHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCC---------CCeEEEeechHHHhhCCCCCCcEEE-eCCCCCC-C--
Q 025363 88 VLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRF---------ICEGINFDLPEVVAEAPSIPGVTHI-GGDMFKS-I-- 154 (254)
Q Consensus 88 i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~---------~~~~~~~D~~~~~~~~~~~~~i~~~-~~d~~~~-~-- 154 (254)
+.+.+..+.++.+|||||||+|.++..++++++. .+ ++++|+.++ ...+++++. .+|+.+. .
T Consensus 13 l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~-v~~vD~s~~----~~~~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 13 VNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGF-VLGVDLLHI----FPLEGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp HHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCE-EEEECSSCC----CCCTTCEEECSCCTTSHHHHH
T ss_pred HHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCce-EEEEechhc----ccCCCCeEEEeccCCCHHHHH
Confidence 3344433567889999999999999999999765 67 999998442 112578999 9998764 1
Q ss_pred ------CC--ccEEEecccccc---C-CHHH-----HHHHHHHHHHhCCCCCEEEEEcc
Q 025363 155 ------PA--ADAIFMKWVLTT---W-TDDE-----CKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 155 ------p~--~D~v~~~~vlh~---~-~~~~-----~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+. .|+|++...+|. + .+.. ...++++++++|||||+|++...
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 22 399998554432 1 1111 14789999999999999998765
No 188
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.17 E-value=3.5e-11 Score=93.33 Aligned_cols=104 Identities=21% Similarity=0.282 Sum_probs=75.5
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeCCCCCCC-----------
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSI----------- 154 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~~----------- 154 (254)
.++.+.+.-++++.+|||+|||+|.++..++++ ..+ ++++|+.++ ...++++++.+|+.+..
T Consensus 14 ~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~-V~gvD~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 14 EFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL--ARK-IISIDLQEM----EEIAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp HHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT--CSE-EEEEESSCC----CCCTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc--CCc-EEEEecccc----ccCCCeEEEEccccCHHHHHHHHHHhhc
Confidence 345555644567899999999999999999988 567 999998432 12368999999998752
Q ss_pred ---CCccEEEeccccc---cCC------HHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 155 ---PAADAIFMKWVLT---TWT------DDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 155 ---p~~D~v~~~~vlh---~~~------~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
...|+|++..... .+. .+.+..+++.+.++|||||+|++..+
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 2249999843221 111 12246789999999999999987554
No 189
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.17 E-value=1.6e-11 Score=99.14 Aligned_cols=98 Identities=13% Similarity=0.054 Sum_probs=78.0
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC---C------CC-
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS---I------PA- 156 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~---~------p~- 156 (254)
.+..+|||||||+|..+..+++.+| +.+ ++.+|+ +.+++.+++. ++|+++.+|+.+. + ++
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~-v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGK-ILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCE-EEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 3467999999999999999999987 677 999999 8888776643 4799999998764 2 23
Q ss_pred ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 157 ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 157 ~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
.|+|++.... .....+++++.++|||||.|++.+..+.
T Consensus 157 fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 194 (247)
T 1sui_A 157 YDFIFVDADK-----DNYLNYHKRLIDLVKVGGVIGYDNTLWN 194 (247)
T ss_dssp BSEEEECSCS-----TTHHHHHHHHHHHBCTTCCEEEECTTGG
T ss_pred EEEEEEcCch-----HHHHHHHHHHHHhCCCCeEEEEecCCcC
Confidence 3999986432 3346889999999999999988765543
No 190
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.16 E-value=1.5e-10 Score=95.16 Aligned_cols=96 Identities=11% Similarity=0.076 Sum_probs=72.5
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec--hHHHhhCCCC----------------CCcEEEeCCCCCC---
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL--PEVVAEAPSI----------------PGVTHIGGDMFKS--- 153 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~--~~~~~~~~~~----------------~~i~~~~~d~~~~--- 153 (254)
..++.+|||||||+|.++..+++.. ..+ ++++|+ +.+++.++.+ +++++...|..+.
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~~-~~~-v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLAG-ADQ-VVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHTT-CSE-EEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH
T ss_pred hcCCCeEEEecccccHHHHHHHHcC-CCE-EEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH
Confidence 3467899999999999999888763 336 999998 5666654321 2688886665543
Q ss_pred C-----CC-ccEEEeccccccCCHHHHHHHHHHHHHhCC---C--CCEEEEE
Q 025363 154 I-----PA-ADAIFMKWVLTTWTDDECKLIMENCYKALP---A--GGKLIAC 194 (254)
Q Consensus 154 ~-----p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~---p--gG~l~i~ 194 (254)
+ +. .|+|++..++++. +....+++.++++|+ | ||++++.
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLLSFH--QAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHHHSCSSBSEEEEESCCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred HHhhccCCCCCEEEEeCcccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 2 22 3999999999875 456789999999999 9 9987763
No 191
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.16 E-value=8.6e-12 Score=98.09 Aligned_cols=97 Identities=18% Similarity=0.115 Sum_probs=77.5
Q ss_pred CCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC--C-ccEEEecc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP--A-ADAIFMKW 164 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p--~-~D~v~~~~ 164 (254)
+..+|||||||+|..+..+++..| +.+ ++++|+ +.+++.++++ ++++++.+|..+..+ . .|+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSR-VVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCE-EEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcC
Confidence 467999999999999999999988 677 999999 8888877643 479999999876422 2 59998763
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 165 VLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 165 vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
.. .....++++++++|||||+|++.+....
T Consensus 135 ~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 135 DV-----FNGADVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp TT-----SCHHHHHHHHGGGEEEEEEEEEESSSSC
T ss_pred Ch-----hhhHHHHHHHHHhcCCCeEEEEECcccc
Confidence 22 3346889999999999999998776543
No 192
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.16 E-value=1.3e-11 Score=98.53 Aligned_cols=131 Identities=10% Similarity=-0.035 Sum_probs=99.7
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCCCC-C-ccEEEeccccc
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSIP-A-ADAIFMKWVLT 167 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~~p-~-~D~v~~~~vlh 167 (254)
.+..+|||||||.|-++..++...|..+ ++++|+ +.+++.++.+ .+.++...|+....| . +|++++.-++|
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~-y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETV-YIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLP 209 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCE-EEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCE-EEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHH
Confidence 4477999999999999999999999999 999999 8888887754 457889999988744 3 49999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCCeee
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPHLR 247 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 247 (254)
++.+++....+ ++.++|+|+|.++..+.-.=..++ ..+ .+.-.+.|.+.+.+.|..+.+
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs--------~gm------------~~~Y~~~~e~~~~~~g~~~~~ 268 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRS--------KGM------------FQNYSQSFESQARERSCRIQR 268 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEEEECC---------------CH------------HHHHHHHHHHHHHHHTCCEEE
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCC--------cch------------hhHHHHHHHHHHHhcCCceee
Confidence 99777666777 999999999998887651111100 000 112356788889989986544
Q ss_pred E
Q 025363 248 L 248 (254)
Q Consensus 248 ~ 248 (254)
+
T Consensus 269 ~ 269 (281)
T 3lcv_B 269 L 269 (281)
T ss_dssp E
T ss_pred e
Confidence 3
No 193
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.16 E-value=3.7e-11 Score=95.59 Aligned_cols=101 Identities=21% Similarity=0.212 Sum_probs=79.4
Q ss_pred HHHhhcC-CCCCCCeEEEecCcccHHHHHHHHHcCC------CCeEEEeec-hHHHhhCCCC-----------CCcEEEe
Q 025363 87 SVLEGYN-GFKGVKRLVDVGGSAGDCLRMILQKHRF------ICEGINFDL-PEVVAEAPSI-----------PGVTHIG 147 (254)
Q Consensus 87 ~i~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~~~------~~~~~~~D~-~~~~~~~~~~-----------~~i~~~~ 147 (254)
.+++.+. ...++.+|||||||+|..+..+++..+. .+ ++++|. +.+++.+++. .+++++.
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTR-IVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCE-EEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCE-EEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 3444442 2567789999999999999999987652 57 999998 8888776642 4799999
Q ss_pred CCCCCCCCC---ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 148 GDMFKSIPA---ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 148 ~d~~~~~p~---~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+|..+.++. .|+|++...++++. +++.+.|||||+|++.-.
T Consensus 152 ~d~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 152 GDGRKGYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp SCGGGCCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred CCcccCCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 999876543 39999999998764 678999999999998643
No 194
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.15 E-value=1.6e-10 Score=95.92 Aligned_cols=97 Identities=13% Similarity=0.045 Sum_probs=69.9
Q ss_pred CCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-----hHHHhhCC--CC--CCcEEEeC-CCCCCCCC-ccEEEe
Q 025363 94 GFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-----PEVVAEAP--SI--PGVTHIGG-DMFKSIPA-ADAIFM 162 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~--~~--~~i~~~~~-d~~~~~p~-~D~v~~ 162 (254)
.++++.+|||||||+|.++..++++ .+ ++++|. +.+++... .. ++|.++.+ |+.+..++ .|+|++
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~---~~-V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~s 154 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL---KN-VREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLC 154 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS---TT-EEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc---CC-EEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEE
Confidence 3567889999999999999999987 36 888887 43333222 11 56999999 88765333 499999
Q ss_pred ccccc--cC-CHHH-HHHHHHHHHHhCCCCCEEEEE
Q 025363 163 KWVLT--TW-TDDE-CKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 163 ~~vlh--~~-~~~~-~~~il~~~~~~L~pgG~l~i~ 194 (254)
...++ ++ .+.. ...+|+.++++|||||.+++.
T Consensus 155 d~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 155 DIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 76653 11 1221 226899999999999988874
No 195
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.14 E-value=1.5e-10 Score=98.22 Aligned_cols=111 Identities=13% Similarity=0.003 Sum_probs=85.9
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC-C
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-I 154 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~-~ 154 (254)
++..++... .+.++.+|||+|||+|.++..++... |+.+ ++++|+ +.+++.++++ .+|+++.+|+.+. .
T Consensus 191 la~~l~~~~-~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~-v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~ 268 (354)
T 3tma_A 191 LAQALLRLA-DARPGMRVLDPFTGSGTIALEAASTLGPTSP-VYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR 268 (354)
T ss_dssp HHHHHHHHT-TCCTTCCEEESSCTTSHHHHHHHHHHCTTSC-EEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG
T ss_pred HHHHHHHHh-CCCCCCEEEeCCCCcCHHHHHHHHhhCCCce-EEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc
Confidence 455566666 48889999999999999999999988 8888 999999 8888887754 3799999999875 3
Q ss_pred C-Cc-cEEEeccccccC-C-HH----HHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 155 P-AA-DAIFMKWVLTTW-T-DD----ECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 155 p-~~-D~v~~~~vlh~~-~-~~----~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+ .. |+|++.-..+.. . .. ....+++++++.|+|||++++...
T Consensus 269 ~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 269 FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 2 23 999995443321 1 11 126899999999999999998643
No 196
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.14 E-value=1.7e-10 Score=93.88 Aligned_cols=105 Identities=11% Similarity=-0.000 Sum_probs=74.5
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC--C------CcEEE--eCCCCCCCCC
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI--P------GVTHI--GGDMFKSIPA 156 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~--~------~i~~~--~~d~~~~~p~ 156 (254)
.+.+.. .+.++.+|||||||+|.++..+++. .+ ++++|+.++...+++. . ++.++ .+|+.+..+.
T Consensus 65 ~i~~~~-~~~~g~~VLDlGcGtG~~s~~la~~---~~-V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~ 139 (265)
T 2oxt_A 65 WMEERG-YVELTGRVVDLGCGRGGWSYYAASR---PH-VMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVE 139 (265)
T ss_dssp HHHHHT-SCCCCEEEEEESCTTSHHHHHHHTS---TT-EEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCC
T ss_pred HHHHcC-CCCCCCEEEEeCcCCCHHHHHHHHc---Cc-EEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCC
Confidence 344443 3677889999999999999998887 57 9999994464333222 2 68999 8999764333
Q ss_pred -ccEEEeccccccCCH---HH--HHHHHHHHHHhCCCCC--EEEEEccc
Q 025363 157 -ADAIFMKWVLTTWTD---DE--CKLIMENCYKALPAGG--KLIACEPV 197 (254)
Q Consensus 157 -~D~v~~~~vlh~~~~---~~--~~~il~~~~~~L~pgG--~l~i~d~~ 197 (254)
.|+|++... +.... +. ...+|+.++++||||| .+++..+.
T Consensus 140 ~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 140 RTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 399999766 33221 11 2248999999999999 88885543
No 197
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.14 E-value=3.5e-11 Score=101.16 Aligned_cols=97 Identities=18% Similarity=0.243 Sum_probs=74.0
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCCCCC-CC-Cc-cEEEecc
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IP-AA-DAIFMKW 164 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~~~~-~p-~~-D~v~~~~ 164 (254)
..++.+|||||||+|.++..++++ +..+ ++++|..++++.+++. ++|+++.+|+.+. +| +. |+|++..
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~-v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~ 113 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-GAKH-VIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEW 113 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-CCSE-EEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECC
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-CCCE-EEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeC
Confidence 345779999999999999998887 4446 9999985566655432 5799999999876 55 33 9999875
Q ss_pred ccccCC-HHHHHHHHHHHHHhCCCCCEEEE
Q 025363 165 VLTTWT-DDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 165 vlh~~~-~~~~~~il~~~~~~L~pgG~l~i 193 (254)
+.+.+. ......+++++++.|||||+++.
T Consensus 114 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 114 MGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred chhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 544332 23456899999999999999873
No 198
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.13 E-value=1.5e-11 Score=96.10 Aligned_cols=97 Identities=9% Similarity=0.000 Sum_probs=75.3
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--------CCcEEEeCCCCCCC-----CC-ccEEE
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--------PGVTHIGGDMFKSI-----PA-ADAIF 161 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--------~~i~~~~~d~~~~~-----p~-~D~v~ 161 (254)
++.+|||+|||+|.++..++++.. .+ ++++|+ +.+++.++++ ++++++.+|+.+.. .. .|+|+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KK-VTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SE-EEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CE-EEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 467999999999999999887743 46 999999 8888877653 47999999986642 13 59999
Q ss_pred eccccccCCHHHHHHHHHHH--HHhCCCCCEEEEEcccc
Q 025363 162 MKWVLTTWTDDECKLIMENC--YKALPAGGKLIACEPVL 198 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~--~~~L~pgG~l~i~d~~~ 198 (254)
+...+| . ....++++.+ .++|+|||++++.....
T Consensus 131 ~~~~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 131 LDPPFH-F--NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp ECCCSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred ECCCCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 987765 3 3456788888 56799999999876543
No 199
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.13 E-value=1.5e-10 Score=94.83 Aligned_cols=105 Identities=11% Similarity=-0.017 Sum_probs=74.2
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC--C------CcEEE--eCCCCCCCCC
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI--P------GVTHI--GGDMFKSIPA 156 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~--~------~i~~~--~~d~~~~~p~ 156 (254)
.+.+.. .+.++.+|||||||+|.++..++++ .+ ++++|+.++...+++. . ++.++ .+|+.+..+.
T Consensus 73 ~i~~~~-~~~~g~~VLDlGcGtG~~s~~la~~---~~-V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~ 147 (276)
T 2wa2_A 73 WIDERG-GVELKGTVVDLGCGRGSWSYYAASQ---PN-VREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPF 147 (276)
T ss_dssp HHHHTT-SCCCCEEEEEESCTTCHHHHHHHTS---TT-EEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCC
T ss_pred HHHHcC-CCCCCCEEEEeccCCCHHHHHHHHc---CC-EEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCC
Confidence 344443 3667889999999999999999987 47 9999994364433322 2 68999 8998764333
Q ss_pred -ccEEEeccccccCCH----HH-HHHHHHHHHHhCCCCC--EEEEEccc
Q 025363 157 -ADAIFMKWVLTTWTD----DE-CKLIMENCYKALPAGG--KLIACEPV 197 (254)
Q Consensus 157 -~D~v~~~~vlh~~~~----~~-~~~il~~~~~~L~pgG--~l~i~d~~ 197 (254)
.|+|++... +.... .. ...+|+.+.++||||| .+++..+.
T Consensus 148 ~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 148 QADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 399999766 33221 11 2248999999999999 88885443
No 200
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.12 E-value=1.7e-10 Score=92.81 Aligned_cols=101 Identities=20% Similarity=0.167 Sum_probs=80.5
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCC-C
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI-P 155 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~-p 155 (254)
...++...+ ..++.+|||+|||+|.++..+++. ..+ ++++|. +.+++.+++. +++++..+|+.+.. +
T Consensus 80 ~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~--~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 155 (248)
T 2yvl_A 80 SFYIALKLN-LNKEKRVLEFGTGSGALLAVLSEV--AGE-VWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP 155 (248)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSE-EEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCccHHHHHHHHh--CCE-EEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC
Confidence 345666663 778899999999999999999998 567 999998 8887776642 57999999998875 5
Q ss_pred C--ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 156 A--ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 156 ~--~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
. .|+|++. .+ +...+++++.++|+|||++++...
T Consensus 156 ~~~~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 156 EGIFHAAFVD-----VR--EPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp TTCBSEEEEC-----SS--CGGGGHHHHHHHBCTTCEEEEEES
T ss_pred CCcccEEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 4 3999972 22 234789999999999999999775
No 201
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.11 E-value=2.8e-11 Score=91.59 Aligned_cols=95 Identities=15% Similarity=0.074 Sum_probs=72.9
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----C-CcEEEeCCCCCCCC-------CccEEEec
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----P-GVTHIGGDMFKSIP-------AADAIFMK 163 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~-~i~~~~~d~~~~~p-------~~D~v~~~ 163 (254)
++.+|||+|||+|.++..+++..+ . ++++|. +.+++.++++ . +++++.+|+.+..+ ..|+|++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--E-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--E-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--e-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 577999999999999999999855 4 899999 8888877653 2 79999999877422 24999998
Q ss_pred cccccCCHHHHHHHHHHHH--HhCCCCCEEEEEcccc
Q 025363 164 WVLTTWTDDECKLIMENCY--KALPAGGKLIACEPVL 198 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~--~~L~pgG~l~i~d~~~ 198 (254)
..+| -..+ ++++.+. ++|+|||++++.....
T Consensus 118 ~~~~-~~~~---~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 118 PPYA-MDLA---ALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCTT-SCTT---HHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCCc-hhHH---HHHHHHHhhcccCCCcEEEEEeCCc
Confidence 7776 2223 3455555 9999999998866543
No 202
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.11 E-value=1.3e-10 Score=92.18 Aligned_cols=93 Identities=20% Similarity=0.133 Sum_probs=75.5
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCCC-----------CCcEEEeCCCCCCCC-C--cc
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPSI-----------PGVTHIGGDMFKSIP-A--AD 158 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~~-----------~~i~~~~~d~~~~~p-~--~D 158 (254)
..++.+|||||||+|..+..+++.. +..+ ++++|+ +.+++.+++. .+++++.+|+.+..+ . .|
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 153 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGK-VIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYD 153 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcE-EEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcC
Confidence 5678899999999999999999986 5567 999999 8888776532 479999999876532 2 39
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+|++...++++ ++++.+.|||||+|++...
T Consensus 154 ~i~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 154 AIHVGAAAPVV--------PQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEECSBBSSC--------CHHHHHTEEEEEEEEEEES
T ss_pred EEEECCchHHH--------HHHHHHhcCCCcEEEEEEe
Confidence 99998888765 3578999999999999754
No 203
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.10 E-value=2.7e-11 Score=96.81 Aligned_cols=97 Identities=18% Similarity=0.141 Sum_probs=77.4
Q ss_pred CCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC---CC-----C-cc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS---IP-----A-AD 158 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~---~p-----~-~D 158 (254)
+..+|||||||+|..+..+++.+| +.+ ++.+|. +.+++.+++. ++|+++.+|+.+. ++ . .|
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQ-IIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCE-EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 467999999999999999999987 667 999999 8888777643 4799999997553 21 3 39
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
+|++.... .....+++++.++|+|||.|++.+..+.
T Consensus 151 ~V~~d~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 151 LIFIDADK-----RNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp EEEECSCG-----GGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred EEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 99976542 3456889999999999999999776553
No 204
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.10 E-value=3.8e-11 Score=96.30 Aligned_cols=97 Identities=15% Similarity=0.095 Sum_probs=77.3
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC---C------CCc
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS---I------PAA 157 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~---~------p~~ 157 (254)
.+..+|||||||+|..+..+++..| +.+ ++.+|. +.+++.+++. ++|+++.+|..+. + ++.
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGK-ITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCE-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 3467999999999999999999987 677 999999 8888776542 4799999998764 2 233
Q ss_pred -cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 158 -DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 158 -D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
|+|++... ......+++++.+.|+|||.|++.+...
T Consensus 148 fD~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 148 YDFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDNTLW 184 (237)
T ss_dssp EEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECTTG
T ss_pred cCEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEecCCc
Confidence 99997532 2445789999999999999998866544
No 205
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.09 E-value=3e-11 Score=96.13 Aligned_cols=98 Identities=12% Similarity=0.148 Sum_probs=77.8
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCC--------C-
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP--------A- 156 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p--------~- 156 (254)
..+..+|||||||+|..+..+++.++ +.+ ++++|. +.+++.+++. .+++++.+|+.+..+ .
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGR-VVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT 145 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCE-EEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence 34567999999999999999999987 667 999999 8887776542 589999999865421 3
Q ss_pred ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 157 ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 157 ~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
.|+|++... ......+++++.++|+|||.+++.+...
T Consensus 146 ~D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 146 FDVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp EEEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred ccEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 399998543 2344688999999999999999977654
No 206
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.09 E-value=1.3e-10 Score=92.34 Aligned_cols=93 Identities=20% Similarity=0.159 Sum_probs=76.2
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHc-----CCCCeEEEeec-hHHHhhCCCC-----------CCcEEEeCCCCCCC---
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKH-----RFICEGINFDL-PEVVAEAPSI-----------PGVTHIGGDMFKSI--- 154 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~-----~~~~~~~~~D~-~~~~~~~~~~-----------~~i~~~~~d~~~~~--- 154 (254)
..++.+|||||||+|..+..+++.. |..+ ++++|. +.+++.+++. .+++++.+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSY-VIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCE-EEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCE-EEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 5667899999999999999999986 4567 999999 8887776542 47999999998754
Q ss_pred -CC---ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 155 -PA---ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 155 -p~---~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+. .|+|++...++++ ++++.+.|||||++++.-.
T Consensus 157 ~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASEL--------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHCCEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEc
Confidence 22 3999999988864 4688999999999998654
No 207
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.09 E-value=1.4e-10 Score=95.07 Aligned_cols=103 Identities=15% Similarity=0.180 Sum_probs=81.3
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCC---------CCCcEEEeCCCCCC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPS---------IPGVTHIGGDMFKS 153 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~---------~~~i~~~~~d~~~~ 153 (254)
...++..++ ..++.+|||+|||+|.++..+++.. |..+ ++++|. +.+++.+++ .++++++.+|+.+.
T Consensus 88 ~~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 88 AAQIVHEGD-IFPGARVLEAGAGSGALTLSLLRAVGPAGQ-VISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSE-EEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC
T ss_pred HHHHHHHcC-CCCCCEEEEEcccccHHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc
Confidence 445677774 7888999999999999999999964 6778 999999 888776653 24799999999876
Q ss_pred -CCC--ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 154 -IPA--ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 154 -~p~--~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
++. .|+|++. .++ ...+++++.++|+|||++++...
T Consensus 166 ~~~~~~~D~v~~~-----~~~--~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 166 ELPDGSVDRAVLD-----MLA--PWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CCCTTCEEEEEEE-----SSC--GGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCCceeEEEEC-----CcC--HHHHHHHHHHhCCCCCEEEEEeC
Confidence 443 3999982 221 23789999999999999999765
No 208
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.09 E-value=6.5e-11 Score=97.38 Aligned_cols=97 Identities=21% Similarity=0.217 Sum_probs=73.3
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCC----------------CCCCcEEEeCCCCCCC--CC-
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAP----------------SIPGVTHIGGDMFKSI--PA- 156 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~----------------~~~~i~~~~~d~~~~~--p~- 156 (254)
...+|||||||+|..+..+++. +..+ ++++|+ +.+++.++ ..++++++.+|..+.+ ++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~-v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDE-VIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSE-EEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCE-EEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 4679999999999999999998 7777 999999 88876643 2367999999986542 33
Q ss_pred ccEEEeccccccCCHHH--HHHHHHHHHHhCCCCCEEEEEc
Q 025363 157 ADAIFMKWVLTTWTDDE--CKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 157 ~D~v~~~~vlh~~~~~~--~~~il~~~~~~L~pgG~l~i~d 195 (254)
.|+|++....+..+... ..+++++++++|+|||.+++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 39999865543222122 2678999999999999998863
No 209
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.08 E-value=4.9e-11 Score=98.22 Aligned_cols=99 Identities=19% Similarity=0.139 Sum_probs=76.5
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC----------CCCcEEEeCCCCCCC---CC-ccEE
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-ADAI 160 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~----------~~~i~~~~~d~~~~~---p~-~D~v 160 (254)
.+..+|||||||+|..+..+++..+..+ ++++|+ +.+++.+++ .++++++.+|+.+.. ++ .|+|
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVEN-IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCE-EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 3568999999999999999998877778 999999 888776543 268999999987642 33 3999
Q ss_pred EeccccccCCHHHH--HHHHHHHHHhCCCCCEEEEEc
Q 025363 161 FMKWVLTTWTDDEC--KLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 161 ~~~~vlh~~~~~~~--~~il~~~~~~L~pgG~l~i~d 195 (254)
++....+..+.... .+++++++++|+|||.+++..
T Consensus 156 i~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 156 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 98544332222222 589999999999999999863
No 210
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.08 E-value=1.9e-10 Score=96.89 Aligned_cols=104 Identities=15% Similarity=0.184 Sum_probs=80.0
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCCC-----------------CCcEE
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPSI-----------------PGVTH 145 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~~-----------------~~i~~ 145 (254)
...++..++ ..++.+|||+|||+|.++..+++.. |..+ ++++|+ +.+++.++++ .++++
T Consensus 94 ~~~~l~~l~-~~~g~~VLDiG~G~G~~~~~la~~~g~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~ 171 (336)
T 2b25_A 94 INMILSMMD-INPGDTVLEAGSGSGGMSLFLSKAVGSQGR-VISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDF 171 (336)
T ss_dssp HHHHHHHHT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCE-EEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEE
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHhCCCce-EEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEE
Confidence 445666664 7788999999999999999999984 6678 999999 8877766542 47999
Q ss_pred EeCCCCCC---CCC--ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 146 IGGDMFKS---IPA--ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 146 ~~~d~~~~---~p~--~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
..+|+.+. ++. .|+|++... .. ..+++++.++|+|||+|++....
T Consensus 172 ~~~d~~~~~~~~~~~~fD~V~~~~~-~~------~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 172 IHKDISGATEDIKSLTFDAVALDML-NP------HVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp EESCTTCCC-------EEEEEECSS-ST------TTTHHHHGGGEEEEEEEEEEESS
T ss_pred EECChHHcccccCCCCeeEEEECCC-CH------HHHHHHHHHhcCCCcEEEEEeCC
Confidence 99999875 233 399998432 21 23789999999999999987653
No 211
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.06 E-value=2.9e-12 Score=102.90 Aligned_cols=92 Identities=17% Similarity=0.086 Sum_probs=75.1
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCCC--ccEEEecccc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA--ADAIFMKWVL 166 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p~--~D~v~~~~vl 166 (254)
++.+|||+|||+|..+..+++.. .+ ++++|+ +.+++.++.+ ++++++.+|+.+..+. .|+|++...+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MR-VIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPW 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CE-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCC
T ss_pred CCCEEEECccccCHHHHHHHHcC--CE-EEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCc
Confidence 57899999999999999999874 66 999999 8888877653 4799999999776433 3999999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 167 TTWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 167 h~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
|+..+. ...+.+++++|+|||.+++
T Consensus 155 ~~~~~~--~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 155 GGPDYA--TAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp SSGGGG--GSSSBCTTTSCSSCHHHHH
T ss_pred CCcchh--hhHHHHHHhhcCCcceeHH
Confidence 876543 3367789999999998554
No 212
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.06 E-value=1.2e-10 Score=96.04 Aligned_cols=104 Identities=18% Similarity=0.273 Sum_probs=77.2
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC-C
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-I 154 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~-~ 154 (254)
+.+.+++.++ ..++.+|||||||+|.++..+++.. .+ ++++|+ +.+++.+++. ++++++.+|+.+. +
T Consensus 16 i~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~L~~~~--~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~ 91 (285)
T 1zq9_A 16 IINSIIDKAA-LRPTDVVLEVGPGTGNMTVKLLEKA--KK-VVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL 91 (285)
T ss_dssp HHHHHHHHTC-CCTTCEEEEECCTTSTTHHHHHHHS--SE-EEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC
T ss_pred HHHHHHHhcC-CCCCCEEEEEcCcccHHHHHHHhhC--CE-EEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc
Confidence 4556777774 6778899999999999999999985 36 999999 8887765532 4799999999875 6
Q ss_pred CCccEEEeccccccCCHHHHHHHHH--------------HH--HHhCCCCCEEE
Q 025363 155 PAADAIFMKWVLTTWTDDECKLIME--------------NC--YKALPAGGKLI 192 (254)
Q Consensus 155 p~~D~v~~~~vlh~~~~~~~~~il~--------------~~--~~~L~pgG~l~ 192 (254)
+..|+|+++... +|+.+....+|. ++ +++++|||+++
T Consensus 92 ~~fD~vv~nlpy-~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 92 PFFDTCVANLPY-QISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCCSEEEEECCG-GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred hhhcEEEEecCc-ccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 656998885444 455555555553 22 46899999653
No 213
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.06 E-value=2.4e-10 Score=97.28 Aligned_cols=95 Identities=20% Similarity=0.229 Sum_probs=69.9
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCC-------CCcEEEeCCCCCC-CCCc-cEEEeccccc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IPAA-DAIFMKWVLT 167 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~-------~~i~~~~~d~~~~-~p~~-D~v~~~~vlh 167 (254)
++++|||||||+|.++...+++. ..+ ++++|..++++.+++. ++|+++.+|+.+. +|+. |+|++-..-+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~-V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~ 160 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARR-VYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGY 160 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSE-EEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBT
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCE-EEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccc
Confidence 46799999999999988777653 235 9999985566555431 6899999999886 7765 9999743322
Q ss_pred cCC-HHHHHHHHHHHHHhCCCCCEEEE
Q 025363 168 TWT-DDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 168 ~~~-~~~~~~il~~~~~~L~pgG~l~i 193 (254)
... ......++....+.|||||+++-
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccchhhhHHHHHHhhCCCCceECC
Confidence 221 23467888889999999998764
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.05 E-value=9.8e-11 Score=97.79 Aligned_cols=98 Identities=19% Similarity=0.178 Sum_probs=76.5
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC-----------CCCcEEEeCCCCCCC---CC-ccEE
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS-----------IPGVTHIGGDMFKSI---PA-ADAI 160 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~-----------~~~i~~~~~d~~~~~---p~-~D~v 160 (254)
...+|||||||+|..+..+++..+..+ ++++|+ +.+++.+++ .++++++.+|+.+.+ ++ .|+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEK-AVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCE-EEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCE-EEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 457999999999999999999877777 999999 888776542 258999999987642 33 3999
Q ss_pred Eecccccc---CCHHH--HHHHHHHHHHhCCCCCEEEEEc
Q 025363 161 FMKWVLTT---WTDDE--CKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 161 ~~~~vlh~---~~~~~--~~~il~~~~~~L~pgG~l~i~d 195 (254)
++....+. -+... ..+++++++++|+|||.|++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 99766543 11111 3688999999999999999864
No 215
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.05 E-value=7.9e-11 Score=96.52 Aligned_cols=98 Identities=22% Similarity=0.221 Sum_probs=75.2
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC----------CCCcEEEeCCCCCCC---CC-ccEEE
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-ADAIF 161 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~----------~~~i~~~~~d~~~~~---p~-~D~v~ 161 (254)
...+|||||||+|.++..+++..+..+ ++++|+ +.+++.+++ .+|++++.+|..+.+ ++ .|+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKK-ATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSE-EEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCce-EEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 467999999999999999998766677 999999 888876653 268999999987642 23 39999
Q ss_pred eccccccCCHHH--HHHHHHHHHHhCCCCCEEEEEc
Q 025363 162 MKWVLTTWTDDE--CKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 162 ~~~vlh~~~~~~--~~~il~~~~~~L~pgG~l~i~d 195 (254)
+....+..+... ..+++++++++|+|||.+++..
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 854433222110 2578999999999999998863
No 216
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.04 E-value=7.7e-11 Score=99.08 Aligned_cols=98 Identities=20% Similarity=0.205 Sum_probs=75.6
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC----------CCCcEEEeCCCCCC---CCC--ccE
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKS---IPA--ADA 159 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~----------~~~i~~~~~d~~~~---~p~--~D~ 159 (254)
....+|||||||+|..+..+++..|..+ ++++|+ +.+++.+++ .++++++.+|+.+. .+. .|+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~-V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQ-IDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCE-EEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 4568999999999999999999877778 999999 888877653 25899999998764 232 399
Q ss_pred EEeccccccCCHHH--HHHHHHHHHHhCCCCCEEEEE
Q 025363 160 IFMKWVLTTWTDDE--CKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 160 v~~~~vlh~~~~~~--~~~il~~~~~~L~pgG~l~i~ 194 (254)
|++....+.-..+. ...++++++++|+|||+|++.
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99854321111111 368999999999999999985
No 217
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.04 E-value=1.6e-10 Score=94.69 Aligned_cols=109 Identities=14% Similarity=0.079 Sum_probs=79.7
Q ss_pred HhhcCCCCCCCeEEEecCcccHHHHHHHHHcCC-CCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC-C-----
Q 025363 89 LEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRF-ICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-I----- 154 (254)
Q Consensus 89 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~-~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~-~----- 154 (254)
...++ ..++.+|||+|||+|..+..+++..++ .+ ++++|. +.+++.++++ .+++++.+|+.+. .
T Consensus 76 ~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~-v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 153 (274)
T 3ajd_A 76 PIVLN-PREDDFILDMCAAPGGKTTHLAQLMKNKGT-IVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKN 153 (274)
T ss_dssp HHHHC-CCTTCEEEETTCTTCHHHHHHHHHTTTCSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHT
T ss_pred HHHhC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCE-EEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhc
Confidence 34443 667889999999999999999998876 67 999999 8877766543 4799999998764 2
Q ss_pred CC-ccEEEec------ccccc---CCHH-------HHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 155 PA-ADAIFMK------WVLTT---WTDD-------ECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 155 p~-~D~v~~~------~vlh~---~~~~-------~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
+. .|+|++. .+++. |+.+ ...++|+++.+.|||||+|++......
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 33 3999975 22221 2221 236899999999999999999776554
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.04 E-value=1.1e-10 Score=97.75 Aligned_cols=97 Identities=19% Similarity=0.135 Sum_probs=74.7
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC----------CCCcEEEeCCCCCCC---CC-ccEEE
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-ADAIF 161 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~----------~~~i~~~~~d~~~~~---p~-~D~v~ 161 (254)
+..+|||||||+|..+..+++..|..+ ++++|+ +.+++.+++ .++++++.+|+.+.. ++ .|+|+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVEN-IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCE-EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 457999999999999999998877778 999999 888876543 257999999987642 33 39999
Q ss_pred eccccccCCH-HHH--HHHHHHHHHhCCCCCEEEEEc
Q 025363 162 MKWVLTTWTD-DEC--KLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 162 ~~~vlh~~~~-~~~--~~il~~~~~~L~pgG~l~i~d 195 (254)
+...-+ +.. ... .+++++++++|+|||.+++..
T Consensus 195 ~d~~~p-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 195 VDSSDP-IGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EECCCS-SSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCcCC-CCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 854322 221 111 689999999999999999853
No 219
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.04 E-value=9.4e-11 Score=97.76 Aligned_cols=97 Identities=22% Similarity=0.206 Sum_probs=72.1
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC----------CCCcEEEeCCCCCCC---CC-ccEEE
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-ADAIF 161 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~----------~~~i~~~~~d~~~~~---p~-~D~v~ 161 (254)
...+|||||||+|..+..+++..|..+ ++++|+ +.+++.+++ .++++++.+|+.+.+ ++ .|+|+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEK-VTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCE-EEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 457999999999999999998877778 999999 888876543 257999999987642 23 39999
Q ss_pred eccccccCCHH-HH--HHHHHHHHHhCCCCCEEEEEc
Q 025363 162 MKWVLTTWTDD-EC--KLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 162 ~~~vlh~~~~~-~~--~~il~~~~~~L~pgG~l~i~d 195 (254)
+...-+ +.+. .. .+++++++++|+|||.|++..
T Consensus 187 ~d~~~~-~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDP-VGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCC-CCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 854332 3222 21 689999999999999999864
No 220
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.04 E-value=9.3e-11 Score=97.43 Aligned_cols=99 Identities=16% Similarity=0.182 Sum_probs=74.1
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC----------CCCcEEEeCCCCCCC---CC-ccEE
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-ADAI 160 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~----------~~~i~~~~~d~~~~~---p~-~D~v 160 (254)
....+|||||||+|..+..+++..+..+ ++++|+ +.+++.+++ .++++++.+|..+.+ ++ .|+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVES-VVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCE-EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 4568999999999999999999877778 999999 888876653 268999999987642 23 3999
Q ss_pred EeccccccCCHH--HHHHHHHHHHHhCCCCCEEEEEc
Q 025363 161 FMKWVLTTWTDD--ECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 161 ~~~~vlh~~~~~--~~~~il~~~~~~L~pgG~l~i~d 195 (254)
++....+..+.. ...+++++++++|+|||.|++..
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 985543321111 13578999999999999999865
No 221
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.04 E-value=7.7e-10 Score=96.87 Aligned_cols=111 Identities=14% Similarity=0.116 Sum_probs=83.7
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCC-CCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC---CC
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRF-ICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IP 155 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~-~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~---~p 155 (254)
-+...++ ..++.+|||+|||+|..+..+++..++ .+ ++++|+ +.+++.++++ .++.++.+|+.+. ++
T Consensus 250 l~~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~-v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~ 327 (450)
T 2yxl_A 250 VASIVLD-PKPGETVVDLAAAPGGKTTHLAELMKNKGK-IYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIG 327 (450)
T ss_dssp HHHHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSE-EEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSC
T ss_pred HHHHhcC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCE-EEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhc
Confidence 3445553 677889999999999999999999876 67 999999 7777665542 4799999998765 33
Q ss_pred -C-ccEEEe------ccccccCCHH-------HH-------HHHHHHHHHhCCCCCEEEEEccccC
Q 025363 156 -A-ADAIFM------KWVLTTWTDD-------EC-------KLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 156 -~-~D~v~~------~~vlh~~~~~-------~~-------~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
. .|+|++ ..+++..++. +. .++|+++.+.|||||+|++.+....
T Consensus 328 ~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 328 EEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp SSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred cCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 3 399996 3344443321 11 5789999999999999999877554
No 222
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.04 E-value=1e-10 Score=95.76 Aligned_cols=97 Identities=15% Similarity=0.100 Sum_probs=79.6
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC-CCC-ccEEEeccc
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IPA-ADAIFMKWV 165 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~-~p~-~D~v~~~~v 165 (254)
..++.+|||+|||+|.++..+++..+..+ ++++|+ +.+++.++++ .++.++.+|+.+. .+. .|+|++...
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~-V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p 195 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKL-VYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYV 195 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSE-EEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCc
Confidence 56788999999999999999999988778 999999 8888877653 5689999999876 212 399998655
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 166 LTTWTDDECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 166 lh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
. ...++++++.+.|+|||.+++.....
T Consensus 196 ~------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 196 H------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp S------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred c------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 3 33568999999999999999877654
No 223
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.02 E-value=1.3e-10 Score=90.79 Aligned_cols=97 Identities=7% Similarity=-0.028 Sum_probs=74.2
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCC--C-C-ccEEEeccc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSI--P-A-ADAIFMKWV 165 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~--p-~-~D~v~~~~v 165 (254)
++.+|||+|||+|.++..++++.. .+ ++++|+ +.+++.++++ .+++++.+|+.+.. + . .|+|++...
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~-V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p 131 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AG-ATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP 131 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SE-EEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CE-EEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC
Confidence 467999999999999999887743 36 999999 8888877653 47999999987642 2 2 399999777
Q ss_pred cccCCHHHHHHHHHHHHH--hCCCCCEEEEEcccc
Q 025363 166 LTTWTDDECKLIMENCYK--ALPAGGKLIACEPVL 198 (254)
Q Consensus 166 lh~~~~~~~~~il~~~~~--~L~pgG~l~i~d~~~ 198 (254)
+| . .....+++.+.+ +|+|||++++.....
T Consensus 132 ~~-~--~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 132 FR-R--GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp SS-T--TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CC-C--CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 65 2 234567788866 499999998866543
No 224
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.01 E-value=5.1e-10 Score=87.10 Aligned_cols=88 Identities=16% Similarity=0.204 Sum_probs=67.4
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCCCCCc-cEEEeccccccCCH
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKSIPAA-DAIFMKWVLTTWTD 171 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~~p~~-D~v~~~~vlh~~~~ 171 (254)
..++.+|||+|||+|.++..+++. +..+ ++++|+ +.+++.++++ .+++++.+|+.+ +|.. |+|++...+|++.+
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-GAES-VTAFDIDPDAIETAKRNCGGVNFMVADVSE-ISGKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-TBSE-EEEEESCHHHHHHHHHHCTTSEEEECCGGG-CCCCEEEEEECCCC-----
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-CCCE-EEEEECCHHHHHHHHHhcCCCEEEECcHHH-CCCCeeEEEECCCchhccC
Confidence 345789999999999999999887 4446 999999 8888877654 379999999976 4444 99999999998876
Q ss_pred HHHHHHHHHHHHhC
Q 025363 172 DECKLIMENCYKAL 185 (254)
Q Consensus 172 ~~~~~il~~~~~~L 185 (254)
....++++++.+.+
T Consensus 126 ~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 126 HSDRAFIDKAFETS 139 (200)
T ss_dssp --CHHHHHHHHHHE
T ss_pred chhHHHHHHHHHhc
Confidence 55568899999998
No 225
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.01 E-value=4.3e-10 Score=91.42 Aligned_cols=88 Identities=16% Similarity=0.099 Sum_probs=72.4
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----------CCcEEEeCCCCCCCCCccEEEeccc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----------PGVTHIGGDMFKSIPAADAIFMKWV 165 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----------~~i~~~~~d~~~~~p~~D~v~~~~v 165 (254)
...+|||||||+|..+..+++. + .+ ++.+|+ +.+++.+++. +|++++.+|..+.....|+|++..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~-v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d~- 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-TH-IDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQ- 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CE-EEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEESS-
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CE-EEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEECC-
Confidence 4579999999999999999988 6 77 999999 8999888753 479999999876552249999852
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 166 LTTWTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 166 lh~~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
++. ..++++++++|+|||.+++.
T Consensus 148 ----~dp--~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 148 ----EPD--IHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp ----CCC--HHHHHHHHTTEEEEEEEEEE
T ss_pred ----CCh--HHHHHHHHHhcCCCcEEEEE
Confidence 222 24899999999999999985
No 226
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.99 E-value=3.5e-10 Score=98.74 Aligned_cols=125 Identities=11% Similarity=0.095 Sum_probs=87.8
Q ss_pred HHHHHHhcCCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCC-CCeEEEeec-hHHHhhCCCC------CCc
Q 025363 72 LMRKAMSGVSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRF-ICEGINFDL-PEVVAEAPSI------PGV 143 (254)
Q Consensus 72 ~~~~~m~~~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~-~~~~~~~D~-~~~~~~~~~~------~~i 143 (254)
.|..+..........-+...++ ..++.+|||+|||+|..+..+++..++ .+ ++++|+ +.+++.++++ . |
T Consensus 77 ~~~~G~~~vQd~ss~l~a~~L~-~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~-V~AvDis~~~l~~a~~n~~r~G~~-v 153 (464)
T 3m6w_A 77 FFYAGLYYIQEPSAQAVGVLLD-PKPGERVLDLAAAPGGKTTHLAARMGGKGL-LLANEVDGKRVRGLLENVERWGAP-L 153 (464)
T ss_dssp HHHTTSEEECCTTTHHHHHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSE-EEEECSCHHHHHHHHHHHHHHCCC-C
T ss_pred HHhCCeEEEECHHHHHHHHhcC-cCCCCEEEEEcCCcCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCe-E
Confidence 3444433333333333445553 667899999999999999999999865 57 999999 8888777653 4 8
Q ss_pred EEEeCCCCCC---CCCc-cEEEe-------------ccccccCCHHHH-------HHHHHHHHHhCCCCCEEEEEccccC
Q 025363 144 THIGGDMFKS---IPAA-DAIFM-------------KWVLTTWTDDEC-------KLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 144 ~~~~~d~~~~---~p~~-D~v~~-------------~~vlh~~~~~~~-------~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
.++.+|+.+. .++. |+|++ ..+...|+.++. .++|+++.+.|||||+|++....+.
T Consensus 154 ~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 154 AVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp EEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred EEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 8999987654 2333 99995 222233443333 6799999999999999998766543
No 227
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.99 E-value=3.9e-10 Score=89.26 Aligned_cols=95 Identities=9% Similarity=0.035 Sum_probs=78.9
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC-CCC-ccEEEeccccc
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA-ADAIFMKWVLT 167 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~-~p~-~D~v~~~~vlh 167 (254)
.+..+|||||||+|-++..+. +..+ ++++|+ +.+++.++.. .+.++...|.... .|. +|++++.-++|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~-y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIAS-VWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSE-EEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCe-EEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHH
Confidence 567899999999999999887 7778 999999 8888877654 5678899999887 444 49999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
++.+.+....+ ++.+.|+|++.++..+
T Consensus 180 ~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 180 LLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 98766655556 8889999998877766
No 228
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.98 E-value=1.9e-10 Score=95.24 Aligned_cols=97 Identities=21% Similarity=0.251 Sum_probs=72.1
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC----------CCCcEEEeCCCCCCC---CC-ccEEE
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-ADAIF 161 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~----------~~~i~~~~~d~~~~~---p~-~D~v~ 161 (254)
...+|||||||+|..+..+++..+..+ ++++|+ +.+++.+++ .++++++.+|+.+.. ++ .|+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEK-AILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSE-EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCE-EEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 357999999999999999998877778 999999 888776543 268999999986642 23 39999
Q ss_pred eccccccCCHH---HHHHHHHHHHHhCCCCCEEEEE
Q 025363 162 MKWVLTTWTDD---ECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 162 ~~~vlh~~~~~---~~~~il~~~~~~L~pgG~l~i~ 194 (254)
+...-+..... ...+++++++++|+|||.|++.
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 74322201110 1258899999999999999985
No 229
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.95 E-value=2.2e-09 Score=88.16 Aligned_cols=93 Identities=15% Similarity=0.091 Sum_probs=67.3
Q ss_pred CCCCCCeEEEecC------cccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCCCCcEE-EeCCCCCC-CCCc-cEEEe
Q 025363 94 GFKGVKRLVDVGG------SAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSIPGVTH-IGGDMFKS-IPAA-DAIFM 162 (254)
Q Consensus 94 ~~~~~~~vlDvG~------G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~~~i~~-~~~d~~~~-~p~~-D~v~~ 162 (254)
..+++.+|||+|| |+|. ..+++..+ +.+ ++++|+ +. + +++++ +.+|+.+. ++.. |+|++
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~-V~gvDis~~-v------~~v~~~i~gD~~~~~~~~~fD~Vvs 129 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTL-LVDSDLNDF-V------SDADSTLIGDCATVHTANKWDLIIS 129 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCE-EEEEESSCC-B------CSSSEEEESCGGGCCCSSCEEEEEE
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCE-EEEEECCCC-C------CCCEEEEECccccCCccCcccEEEE
Confidence 3677889999999 4477 44566666 577 999999 55 1 47899 99999875 4443 99998
Q ss_pred cccccc---C------CHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 163 KWVLTT---W------TDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 163 ~~vlh~---~------~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
....+. + ..+....+++.++++|||||+|++..+
T Consensus 130 n~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 130 DMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp CCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 533211 0 012345899999999999999998643
No 230
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.94 E-value=2.4e-09 Score=89.95 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=73.4
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------C-CcEEEeCCCCCCC------CC-ccEE
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------P-GVTHIGGDMFKSI------PA-ADAI 160 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~-~i~~~~~d~~~~~------p~-~D~v 160 (254)
++.+|||+|||+|.++..+++.. .+ ++++|+ +.+++.++++ + +++++.+|+++.. .. .|+|
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~g--a~-V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAG--AE-VTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT--CE-EEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCcEEEcccccCHHHHHHHHcC--CE-EEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 46799999999999999999864 37 999999 8888877653 2 5999999998753 22 4999
Q ss_pred Eeccc---------cccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 161 FMKWV---------LTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 161 ~~~~v---------lh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
++.-- +.++ .+....+++++.++|+|||.+++...
T Consensus 230 i~dPP~~~~~~~~~~~~~-~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQL-FDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp EECCCSEEECTTCCEEEH-HHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred EECCccccCCchHHHHHH-HHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 98321 1111 24567899999999999999777554
No 231
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.94 E-value=5.1e-09 Score=81.78 Aligned_cols=89 Identities=13% Similarity=0.017 Sum_probs=70.6
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----C-CcEEEeCCCCCCCCCccEEEecccccc
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----P-GVTHIGGDMFKSIPAADAIFMKWVLTT 168 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~-~i~~~~~d~~~~~p~~D~v~~~~vlh~ 168 (254)
..++.+|||+|||+|.++..+++..+ .+ ++++|+ +.+++.++.+ . +++++.+|+.+.....|+|++.-.+|.
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~-~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGA-KE-VICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGS 124 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTC-SE-EEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSS
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCC-CE-EEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCCCcc
Confidence 34578999999999999999998733 36 999999 8888777653 1 799999999764223499999888887
Q ss_pred CCHHHHHHHHHHHHHhC
Q 025363 169 WTDDECKLIMENCYKAL 185 (254)
Q Consensus 169 ~~~~~~~~il~~~~~~L 185 (254)
+.......+++++.+.+
T Consensus 125 ~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 125 QRKHADRPFLLKAFEIS 141 (207)
T ss_dssp SSTTTTHHHHHHHHHHC
T ss_pred ccCCchHHHHHHHHHhc
Confidence 76555567899999998
No 232
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.93 E-value=3.4e-09 Score=90.53 Aligned_cols=104 Identities=12% Similarity=-0.034 Sum_probs=75.9
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC-CC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IP 155 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~-~p 155 (254)
+..++... +.++.+|||+|||+|.++..+++..+..+ ++++|+ +.+++.++.+ ++|+++.+|+.+. .+
T Consensus 207 a~~l~~~~--~~~~~~vLD~gCGsG~~~i~~a~~~~~~~-v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~ 283 (373)
T 3tm4_A 207 ANAMIELA--ELDGGSVLDPMCGSGTILIELALRRYSGE-IIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQY 283 (373)
T ss_dssp HHHHHHHH--TCCSCCEEETTCTTCHHHHHHHHTTCCSC-EEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGT
T ss_pred HHHHHHhh--cCCCCEEEEccCcCcHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcc
Confidence 33344433 56788999999999999999999987667 999999 8888887754 4799999999876 44
Q ss_pred -Cc-cEEEeccccccCC-----HHH-HHHHHHHHHHhCCCCCEEEE
Q 025363 156 -AA-DAIFMKWVLTTWT-----DDE-CKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 156 -~~-D~v~~~~vlh~~~-----~~~-~~~il~~~~~~L~pgG~l~i 193 (254)
+. |+|++.-.++... .++ -.++++.++++| ||++++
T Consensus 284 ~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~ 327 (373)
T 3tm4_A 284 VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVF 327 (373)
T ss_dssp CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEE
T ss_pred cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEE
Confidence 33 9999965433211 112 267889999988 555554
No 233
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.92 E-value=3.4e-09 Score=91.83 Aligned_cols=108 Identities=17% Similarity=0.163 Sum_probs=79.2
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCC--ccE
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPA--ADA 159 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~--~D~ 159 (254)
+++.+++.++ ..+..+|||+|||+|.++..+++++ +..+ ++++|+ +.+++.+ .+++++.+|+++..+. .|+
T Consensus 27 l~~~~~~~~~-~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~-i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~ 101 (421)
T 2ih2_A 27 VVDFMVSLAE-APRGGRVLEPACAHGPFLRAFREAHGTAYR-FVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDL 101 (421)
T ss_dssp HHHHHHHHCC-CCTTCEEEEETCTTCHHHHHHHHHHCSCSE-EEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEE
T ss_pred HHHHHHHhhc-cCCCCEEEECCCCChHHHHHHHHHhCCCCe-EEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCE
Confidence 3444555553 3446699999999999999999987 5667 999999 7777666 6799999999887443 399
Q ss_pred EEeccccc----------cCCHHHH-----------------HHHHHHHHHhCCCCCEEEEEcc
Q 025363 160 IFMKWVLT----------TWTDDEC-----------------KLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 160 v~~~~vlh----------~~~~~~~-----------------~~il~~~~~~L~pgG~l~i~d~ 196 (254)
|++.--.. ++.++.. ..+++++.+.|+|||++++.-+
T Consensus 102 Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 102 ILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp EEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 99942111 1222221 2679999999999999988654
No 234
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.91 E-value=1.2e-09 Score=90.56 Aligned_cols=101 Identities=15% Similarity=0.197 Sum_probs=72.6
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC-CC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IP 155 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~-~p 155 (254)
+.+.+++..+ ..++.+|||||||+|.++..++++ ..+ ++++|+ +.+++.+++. ++++++.+|+.+. .+
T Consensus 30 i~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~La~~--~~~-v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~ 105 (299)
T 2h1r_A 30 ILDKIIYAAK-IKSSDIVLEIGCGTGNLTVKLLPL--AKK-VITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP 105 (299)
T ss_dssp HHHHHHHHHC-CCTTCEEEEECCTTSTTHHHHTTT--SSE-EEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC
T ss_pred HHHHHHHhcC-CCCcCEEEEEcCcCcHHHHHHHhc--CCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc
Confidence 4566677664 677889999999999999999987 346 999999 8887766542 5799999999876 44
Q ss_pred CccEEEeccccccCCHHHHHHHH---------------HHHHHhCCCCC
Q 025363 156 AADAIFMKWVLTTWTDDECKLIM---------------ENCYKALPAGG 189 (254)
Q Consensus 156 ~~D~v~~~~vlh~~~~~~~~~il---------------~~~~~~L~pgG 189 (254)
..|+|++.-. ++|+.+....++ +.+.++++|+|
T Consensus 106 ~~D~Vv~n~p-y~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 106 KFDVCTANIP-YKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp CCSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred cCCEEEEcCC-cccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 4599988544 446666666666 44678888876
No 235
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.91 E-value=5.4e-10 Score=97.40 Aligned_cols=126 Identities=13% Similarity=0.125 Sum_probs=86.5
Q ss_pred HHHHHHhcCCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCC-CCeEEEeec-hHHHhhCCCC------CCc
Q 025363 72 LMRKAMSGVSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRF-ICEGINFDL-PEVVAEAPSI------PGV 143 (254)
Q Consensus 72 ~~~~~m~~~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~-~~~~~~~D~-~~~~~~~~~~------~~i 143 (254)
.|..+.-........-+...++ ..++.+|||+|||+|..+..+++..++ .+ ++++|+ +.+++.++++ .+|
T Consensus 81 ~~~~G~~~vQd~ss~l~~~~L~-~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~-V~AvDis~~rl~~~~~n~~r~g~~nv 158 (456)
T 3m4x_A 81 LHQAGYEYSQEPSAMIVGTAAA-AKPGEKVLDLCAAPGGKSTQLAAQMKGKGL-LVTNEIFPKRAKILSENIERWGVSNA 158 (456)
T ss_dssp HHHTTSCEECCTTTHHHHHHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSE-EEEECSSHHHHHHHHHHHHHHTCSSE
T ss_pred HHhCCcEEEECHHHHHHHHHcC-CCCCCEEEEECCCcCHHHHHHHHHcCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCce
Confidence 3444433333333334455553 677899999999999999999998764 57 999999 8777766543 568
Q ss_pred EEEeCCCCCC---CCCc-cEEEecc------cccc-------CCHHH-------HHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 144 THIGGDMFKS---IPAA-DAIFMKW------VLTT-------WTDDE-------CKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 144 ~~~~~d~~~~---~p~~-D~v~~~~------vlh~-------~~~~~-------~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
.++.+|..+. .++. |+|++.- +++. |+.++ ..++|+++.+.|||||+|+.....+.
T Consensus 159 ~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 159 IVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp EEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred EEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 8998887653 2333 9998722 2221 22111 13789999999999999998765543
No 236
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.91 E-value=3.5e-09 Score=93.15 Aligned_cols=108 Identities=19% Similarity=0.238 Sum_probs=81.1
Q ss_pred hhcCCCC--CCCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC---CCC
Q 025363 90 EGYNGFK--GVKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IPA 156 (254)
Q Consensus 90 ~~~~~~~--~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~---~p~ 156 (254)
..++ .. ++.+|||+|||+|..+..+++..+ ... ++++|+ +.+++.++++ .+|.++.+|+.+. .+.
T Consensus 109 ~~L~-~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~-V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~ 186 (479)
T 2frx_A 109 AALF-ADGNAPQRVMDVAAAPGSKTTQISARMNNEGA-ILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPE 186 (479)
T ss_dssp HHHT-TTTCCCSEEEESSCTTSHHHHHHHHHTTTCSE-EEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTT
T ss_pred HHhC-cccCCCCEEEEeCCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccc
Confidence 4443 44 788999999999999999999875 467 999999 8887766543 5799999998764 233
Q ss_pred c-cEEEec-------------cccccCCHHH-------HHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 157 A-DAIFMK-------------WVLTTWTDDE-------CKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 157 ~-D~v~~~-------------~vlh~~~~~~-------~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
. |+|++. .+...|+.++ -.++|+++.++|||||+|++......
T Consensus 187 ~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 187 MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 3 999971 1223455433 24789999999999999999776554
No 237
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.90 E-value=2.3e-09 Score=86.21 Aligned_cols=105 Identities=9% Similarity=0.152 Sum_probs=74.3
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCC-CCC-
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA- 156 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~-~p~- 156 (254)
..+.+++..+ ..++.+|||||||+|.++..++++. .+ ++++|+ +.+++.+++. ++++++.+|+.+. ++.
T Consensus 18 ~~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~l~~~~--~~-v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~ 93 (244)
T 1qam_A 18 NIDKIMTNIR-LNEHDNIFEIGSGKGHFTLELVQRC--NF-VTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKN 93 (244)
T ss_dssp HHHHHHTTCC-CCTTCEEEEECCTTSHHHHHHHHHS--SE-EEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSS
T ss_pred HHHHHHHhCC-CCCCCEEEEEeCCchHHHHHHHHcC--Ce-EEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccC
Confidence 4566777774 6778899999999999999999986 56 999999 8887766542 6899999999875 553
Q ss_pred ccEEEeccccccCCHHHHHHHH--------------HHHHHhCCCCCEEE
Q 025363 157 ADAIFMKWVLTTWTDDECKLIM--------------ENCYKALPAGGKLI 192 (254)
Q Consensus 157 ~D~v~~~~vlh~~~~~~~~~il--------------~~~~~~L~pgG~l~ 192 (254)
.+..++.+.-++++..-...++ +.+.++++|+|++.
T Consensus 94 ~~~~vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~ 143 (244)
T 1qam_A 94 QSYKIFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLA 143 (244)
T ss_dssp CCCEEEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHH
T ss_pred CCeEEEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchh
Confidence 3445555544445443333443 33677777777543
No 238
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.90 E-value=2.8e-10 Score=102.49 Aligned_cols=101 Identities=11% Similarity=0.018 Sum_probs=80.2
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCC---CC-C-ccEEEecc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IP-A-ADAIFMKW 164 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~---~p-~-~D~v~~~~ 164 (254)
...+|||||||+|.++..+++. +.+ ++++|. +.+++.|+.. .+|+|..+++.+. .+ + .|+|++..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~--ga~-V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK--GAT-IVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHhC--CCE-EEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 4579999999999999999998 667 999999 8888776532 3589999998653 22 3 39999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCC
Q 025363 165 VLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 200 (254)
Q Consensus 165 vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~ 200 (254)
+|||+++.+...-+.++.+.|+++|+.++......+
T Consensus 143 ~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e 178 (569)
T 4azs_A 143 VFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKE 178 (569)
T ss_dssp CHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTT
T ss_pred chhcCCCHHHHHHHHHHHHHhccccceeeEEecccc
Confidence 999998776555566788888888887777665543
No 239
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.88 E-value=6.2e-10 Score=89.63 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=79.5
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCC-CCC-
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA- 156 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~-~p~- 156 (254)
..+.+++.++ ..++.+|||||||+|.++..+++.. .+ ++++|+ +.+++.+++. ++++++.+|+.+. ++.
T Consensus 17 ~~~~i~~~~~-~~~~~~VLDiG~G~G~~~~~l~~~~--~~-v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~ 92 (245)
T 1yub_A 17 VLNQIIKQLN-LKETDTVYEIGTGKGHLTTKLAKIS--KQ-VTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNK 92 (245)
T ss_dssp THHHHHHHCC-CCSSEEEEECSCCCSSCSHHHHHHS--SE-EEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCS
T ss_pred HHHHHHHhcC-CCCCCEEEEEeCCCCHHHHHHHHhC--Ce-EEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccC
Confidence 4556677774 6778899999999999999999985 56 999999 8888887764 5799999999875 443
Q ss_pred ccEEEeccccccCCHHHHHHHH--------------HHHHHhCCCCCEEEEEcc
Q 025363 157 ADAIFMKWVLTTWTDDECKLIM--------------ENCYKALPAGGKLIACEP 196 (254)
Q Consensus 157 ~D~v~~~~vlh~~~~~~~~~il--------------~~~~~~L~pgG~l~i~d~ 196 (254)
...+++.+.-++.+......++ +.+.++|+|||++.+...
T Consensus 93 ~~f~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 93 QRYKIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp SEEEEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred CCcEEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 2334444443344444444443 668999999998877543
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.88 E-value=1.8e-09 Score=91.21 Aligned_cols=100 Identities=17% Similarity=0.228 Sum_probs=79.1
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCC-----CCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCCCC-C-ccEEEe
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRF-----ICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSIP-A-ADAIFM 162 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~-----~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~~p-~-~D~v~~ 162 (254)
.+..+|||+|||+|.++..+++..+. .+ ++++|+ +.+++.++.+ .++.+..+|.++..+ . .|+|++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~-v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVH-ASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVIS 207 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCce-EEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEE
Confidence 35689999999999999999998764 56 899999 8877766543 368999999988743 3 399999
Q ss_pred ccccccCCHHHH----------------HHHHHHHHHhCCCCCEEEEEcc
Q 025363 163 KWVLTTWTDDEC----------------KLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 163 ~~vlh~~~~~~~----------------~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.-.++.++.++. ..+++++.+.|+|||++++.-+
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 877766654332 2689999999999999888653
No 241
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.86 E-value=3.7e-09 Score=86.35 Aligned_cols=120 Identities=15% Similarity=0.028 Sum_probs=88.4
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCCC--ccEEEecc
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA--ADAIFMKW 164 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p~--~D~v~~~~ 164 (254)
.+++.+|||+|||+|.++..++++. ..+ ++++|+ |..++.++++ ++|++..+|..+..+. +|.|++..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g-~~~-V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~ 200 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KAK-VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGY 200 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT-CCE-EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc-CCe-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECC
Confidence 4578899999999999999998873 457 999999 8887776653 6799999999876544 39988754
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCC
Q 025363 165 VLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFP 244 (254)
Q Consensus 165 vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 244 (254)
.- .+...|..+.++|||||.|.+.+....+.. .....+.+.++.++.|++
T Consensus 201 p~------~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~------------------------~~~~~e~i~~~~~~~g~~ 250 (278)
T 3k6r_A 201 VV------RTHEFIPKALSIAKDGAIIHYHNTVPEKLM------------------------PREPFETFKRITKEYGYD 250 (278)
T ss_dssp CS------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGT------------------------TTTTHHHHHHHHHHTTCE
T ss_pred CC------cHHHHHHHHHHHcCCCCEEEEEeeeccccc------------------------chhHHHHHHHHHHHcCCc
Confidence 32 224678888999999999888765432210 012345677788888987
Q ss_pred ee
Q 025363 245 HL 246 (254)
Q Consensus 245 ~~ 246 (254)
+.
T Consensus 251 v~ 252 (278)
T 3k6r_A 251 VE 252 (278)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 242
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.83 E-value=3.5e-09 Score=92.16 Aligned_cols=110 Identities=15% Similarity=0.149 Sum_probs=82.2
Q ss_pred HHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC---CC-C-
Q 025363 88 VLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS---IP-A- 156 (254)
Q Consensus 88 i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~---~p-~- 156 (254)
+...++ ..++.+|||+|||+|..+..+++..++.+ ++++|. +.+++.++++ -++.++.+|+.+. ++ .
T Consensus 238 ~~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~-v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~ 315 (429)
T 1sqg_A 238 CMTWLA-PQNGEHILDLCAAPGGKTTHILEVAPEAQ-VVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQ 315 (429)
T ss_dssp HHHHHC-CCTTCEEEEESCTTCHHHHHHHHHCTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCC
T ss_pred HHHHcC-CCCcCeEEEECCCchHHHHHHHHHcCCCE-EEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCC
Confidence 445553 66788999999999999999999998878 999998 7776665543 3588999999775 23 2
Q ss_pred ccEEEe------ccccccCCH-------HHH-------HHHHHHHHHhCCCCCEEEEEccccC
Q 025363 157 ADAIFM------KWVLTTWTD-------DEC-------KLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 157 ~D~v~~------~~vlh~~~~-------~~~-------~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
.|+|++ ..+++.-++ ++. .++|+++.+.|||||+|++.+..+.
T Consensus 316 fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred CCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 399986 234443322 122 4889999999999999999876553
No 243
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.74 E-value=9.8e-08 Score=81.01 Aligned_cols=152 Identities=16% Similarity=0.123 Sum_probs=91.9
Q ss_pred CCeEEEecCcccHHHHHH--------HHHc-------CCCCeEEEeechHH--------HhhCCC----------C--CC
Q 025363 98 VKRLVDVGGSAGDCLRMI--------LQKH-------RFICEGINFDLPEV--------VAEAPS----------I--PG 142 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l--------~~~~-------~~~~~~~~~D~~~~--------~~~~~~----------~--~~ 142 (254)
..+|+|+|||+|..+..+ .+++ |..+ ++.-|+|.- +...++ . ++
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~-v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFT-AFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEE-EEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCcee-EEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 578999999999988876 3333 5666 788788532 122111 0 11
Q ss_pred --cEEEeCCCCCC-CCCc--cEEEeccccccCCH------------------------------------HHHHHHHHHH
Q 025363 143 --VTHIGGDMFKS-IPAA--DAIFMKWVLTTWTD------------------------------------DECKLIMENC 181 (254)
Q Consensus 143 --i~~~~~d~~~~-~p~~--D~v~~~~vlh~~~~------------------------------------~~~~~il~~~ 181 (254)
+.-+.++|... +|.. |+|+.+.+||-.++ .+-..+|+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 23466777776 6764 99999999996551 1344579999
Q ss_pred HHhCCCCCEEEEEccccCCCCCCh-------h-hhhhcccchHhhhhc--------cccCceecCHHHHHHHHH-hCCCC
Q 025363 182 YKALPAGGKLIACEPVLPDDSNES-------Q-RTRALLEGDIFVMTI--------YRAKGNHRTEQEFKQLGF-FAGFP 244 (254)
Q Consensus 182 ~~~L~pgG~l~i~d~~~~~~~~~~-------~-~~~~~~~~~~~~~~~--------~~~~~~~~t~~e~~~ll~-~aGf~ 244 (254)
++.|+|||++++.-....+..... + ......+.++....+ ....-..++.+|++++++ ++||+
T Consensus 212 a~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~ 291 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFA 291 (374)
T ss_dssp HHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEE
T ss_pred HHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcE
Confidence 999999999998766544321000 0 000000111100000 000012368999999998 59999
Q ss_pred eeeEEE
Q 025363 245 HLRLYR 250 (254)
Q Consensus 245 ~~~~~~ 250 (254)
+..+..
T Consensus 292 I~~le~ 297 (374)
T 3b5i_A 292 IDKLVV 297 (374)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 877654
No 244
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.71 E-value=3.5e-08 Score=84.68 Aligned_cols=111 Identities=5% Similarity=-0.097 Sum_probs=81.8
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCC--------------------------------------CCeE
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRF--------------------------------------ICEG 125 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~--------------------------------------~~~~ 125 (254)
++..++... .|.++..|||.+||+|.++++.+....+ .+ +
T Consensus 189 lAa~ll~l~-~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~-V 266 (393)
T 3k0b_A 189 MAAALVLLT-SWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN-I 266 (393)
T ss_dssp HHHHHHHHS-CCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC-E
T ss_pred HHHHHHHHh-CCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce-E
Confidence 455566666 4888999999999999999988876443 56 9
Q ss_pred EEeec-hHHHhhCCCC-------CCcEEEeCCCCCC-CCC-ccEEEeccc--cccCCHHHHHHHHHHHHHhCCC--CCEE
Q 025363 126 INFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IPA-ADAIFMKWV--LTTWTDDECKLIMENCYKALPA--GGKL 191 (254)
Q Consensus 126 ~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~-~p~-~D~v~~~~v--lh~~~~~~~~~il~~~~~~L~p--gG~l 191 (254)
+++|+ +.+++.++.+ ++|+++.+|+.+. .+. .|+|++.-- ...-..++...+.+.+.+.||+ ||++
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~ 346 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSV 346 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEE
Confidence 99999 8898887753 4699999999886 333 399999733 3221224556677777777765 8988
Q ss_pred EEEcc
Q 025363 192 IACEP 196 (254)
Q Consensus 192 ~i~d~ 196 (254)
++...
T Consensus 347 ~iit~ 351 (393)
T 3k0b_A 347 YVLTS 351 (393)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88654
No 245
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.70 E-value=6.7e-09 Score=89.45 Aligned_cols=99 Identities=16% Similarity=0.118 Sum_probs=75.5
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCC------CC-ccEEE
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI------PA-ADAIF 161 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~------p~-~D~v~ 161 (254)
++.+|||+|||+|.++..+++. +..+ ++++|+ +.+++.++++ ++++++.+|+++.. +. .|+|+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~-v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADE-VIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSE-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCE-EEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 6789999999999999999987 3346 999999 8888777653 27999999987752 22 39999
Q ss_pred eccccccCCH-------HHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 162 MKWVLTTWTD-------DECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 162 ~~~vlh~~~~-------~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
+.-.....+. .....++.++.+.|+|||.|++....
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 8432211111 45678999999999999999887653
No 246
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.69 E-value=6.4e-09 Score=89.13 Aligned_cols=97 Identities=19% Similarity=0.117 Sum_probs=74.8
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCC------CCc-cEEEe
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSI------PAA-DAIFM 162 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~------p~~-D~v~~ 162 (254)
++.+|||+|||+|.++..+++. ..+ ++++|+ +.+++.++++ .+++++.+|+++.. +.. |+|++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~-v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FRE-VVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEE-EEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCE-EEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 6789999999999999999988 456 999999 8888877653 35899999997752 223 99998
Q ss_pred ccccccCC-------HHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 163 KWVLTTWT-------DDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 163 ~~vlh~~~-------~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.--....+ .+...++++++.+.|+|||.|++...
T Consensus 286 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 43221111 14456899999999999999998765
No 247
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.68 E-value=1.2e-07 Score=81.12 Aligned_cols=112 Identities=9% Similarity=-0.054 Sum_probs=84.9
Q ss_pred hhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCC--------------------------------------CCe
Q 025363 83 PFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRF--------------------------------------ICE 124 (254)
Q Consensus 83 ~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~--------------------------------------~~~ 124 (254)
.++..++... .|.++..++|.+||+|.++++.+....+ .+
T Consensus 181 ~LAaall~l~-~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~- 258 (384)
T 3ldg_A 181 NMAAAIILLS-NWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD- 258 (384)
T ss_dssp HHHHHHHHHT-TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC-
T ss_pred HHHHHHHHHh-CCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce-
Confidence 3455666666 4888999999999999999998876443 56
Q ss_pred EEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC-CCC-ccEEEeccc--cccCCHHHHHHHHHHHHHhCCC--CCE
Q 025363 125 GINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IPA-ADAIFMKWV--LTTWTDDECKLIMENCYKALPA--GGK 190 (254)
Q Consensus 125 ~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~-~p~-~D~v~~~~v--lh~~~~~~~~~il~~~~~~L~p--gG~ 190 (254)
++++|+ +.+++.++.+ ++|+++.+|+.+. .+. .|+|++.-- ...-..++...+.+.+.+.||+ ||+
T Consensus 259 v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~ 338 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWS 338 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcE
Confidence 999999 8888887754 4699999999886 333 399999633 3322346677888888888876 998
Q ss_pred EEEEcc
Q 025363 191 LIACEP 196 (254)
Q Consensus 191 l~i~d~ 196 (254)
+++...
T Consensus 339 ~~iit~ 344 (384)
T 3ldg_A 339 QFILTN 344 (384)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 888654
No 248
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.68 E-value=5.6e-09 Score=89.55 Aligned_cols=99 Identities=12% Similarity=0.058 Sum_probs=73.5
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------C--CcEEEeCCCCCCCC------C-ccE
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------P--GVTHIGGDMFKSIP------A-ADA 159 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~--~i~~~~~d~~~~~p------~-~D~ 159 (254)
.++.+|||+|||+|.++..+++.. ..+ ++++|+ +.+++.++++ . +++|+.+|+++.++ . .|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~-V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~ 288 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMA-TTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDI 288 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSE-EEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCE-EEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccE
Confidence 457899999999999999999863 235 999999 8888877653 2 89999999977422 2 399
Q ss_pred EEecccc-----ccCC--HHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 160 IFMKWVL-----TTWT--DDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 160 v~~~~vl-----h~~~--~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
|++.-.. .... .+...++++.+.+.|+|||.|++...
T Consensus 289 Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 289 IIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp EEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9983222 1111 23455688999999999999988653
No 249
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.67 E-value=1.5e-08 Score=85.40 Aligned_cols=93 Identities=11% Similarity=0.029 Sum_probs=73.4
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCCCCCccEEEeccccc
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPAADAIFMKWVLT 167 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~p~~D~v~~~~vlh 167 (254)
.++.+|||+|||+|.++.. ++ ...+ ++++|+ +.+++.++++ ++++++.+|+++.....|+|++.-.-
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~-V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP~- 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKK-IYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLPK- 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCTT-
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCcH-
Confidence 4678999999999999999 76 3556 999999 8888777653 47999999998766334999984321
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
....+++.+.++|+|||.|++.+...
T Consensus 269 -----~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 269 -----FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp -----TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred -----hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 12378999999999999999977643
No 250
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.64 E-value=5.5e-08 Score=83.31 Aligned_cols=111 Identities=14% Similarity=-0.007 Sum_probs=83.1
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCC--------------------------------------CCeE
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRF--------------------------------------ICEG 125 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~--------------------------------------~~~~ 125 (254)
++..++... .|.++.+|||.+||+|.++++.+....+ .+ +
T Consensus 183 lAa~ll~~~-~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~-V 260 (385)
T 3ldu_A 183 LAAGLIYLT-PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK-I 260 (385)
T ss_dssp HHHHHHHTS-CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC-E
T ss_pred HHHHHHHhh-CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce-E
Confidence 455566666 4888999999999999999998876432 56 9
Q ss_pred EEeec-hHHHhhCCCC-------CCcEEEeCCCCCCC-CC-ccEEEecccccc-CC-HHHHHHHHHHHHHhCCC--CCEE
Q 025363 126 INFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI-PA-ADAIFMKWVLTT-WT-DDECKLIMENCYKALPA--GGKL 191 (254)
Q Consensus 126 ~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~~-p~-~D~v~~~~vlh~-~~-~~~~~~il~~~~~~L~p--gG~l 191 (254)
+++|+ +.+++.++.+ .+|+|..+|+.+.. +. .|+|++.--... +. .++...+.+++.+.||+ |+.+
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~ 340 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSY 340 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEE
Confidence 99999 8899888764 36999999998863 33 399999544321 22 34567788888888876 8888
Q ss_pred EEEcc
Q 025363 192 IACEP 196 (254)
Q Consensus 192 ~i~d~ 196 (254)
++...
T Consensus 341 ~iit~ 345 (385)
T 3ldu_A 341 YLITS 345 (385)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 88654
No 251
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.63 E-value=4.4e-08 Score=84.04 Aligned_cols=99 Identities=12% Similarity=0.063 Sum_probs=73.2
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCCC---CC-ccEEEeccc
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSI---PA-ADAIFMKWV 165 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~~---p~-~D~v~~~~v 165 (254)
+++.+|||+|||+|.++..+++. +.. ++++|+ +.+++.++++ -...+..+|+++.+ +. .|+|++.-.
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~--ga~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK--GAY-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred cCCCeEEEcccchhHHHHHHHHc--CCe-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCC
Confidence 45889999999999999999987 556 999999 8888887754 12357789987752 23 499998433
Q ss_pred cccCC-------HHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 166 LTTWT-------DDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 166 lh~~~-------~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
....+ ...-.++++.+.++|+|||+|++....
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 21111 123457899999999999999976654
No 252
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.60 E-value=2.6e-08 Score=87.01 Aligned_cols=111 Identities=17% Similarity=0.142 Sum_probs=81.0
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-------------CCCCeEEEeec-hHHHhhCCCC------C--
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-------------RFICEGINFDL-PEVVAEAPSI------P-- 141 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------------~~~~~~~~~D~-~~~~~~~~~~------~-- 141 (254)
+++.+++... ..+..+|+|.|||+|.++..+++.. +..+ ++++|+ +.+++.++.+ .
T Consensus 159 v~~~mv~~l~-~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~-i~G~Ei~~~~~~lA~~nl~l~g~~~~ 236 (445)
T 2okc_A 159 LIQAMVDCIN-PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKA-LHGVDNTPLVVTLASMNLYLHGIGTD 236 (445)
T ss_dssp HHHHHHHHHC-CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTT-EEEEESCHHHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHhC-CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeE-EEEEeCCHHHHHHHHHHHHHhCCCcC
Confidence 3445666663 5567899999999999999988764 3467 999999 8777766432 2
Q ss_pred CcEEEeCCCCCCCC-C-ccEEEeccccccCCHH---------------HHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 142 GVTHIGGDMFKSIP-A-ADAIFMKWVLTTWTDD---------------ECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 142 ~i~~~~~d~~~~~p-~-~D~v~~~~vlh~~~~~---------------~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
++.+..+|.+...+ . .|+|++.-.++..... ....+++++.+.|+|||+++++-+
T Consensus 237 ~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 237 RSPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CCSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 67899999988633 2 4999997655542111 124789999999999999987653
No 253
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.54 E-value=4.7e-08 Score=82.17 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=69.7
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--------------CCcEEEeCCCCCCCC------
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--------------PGVTHIGGDMFKSIP------ 155 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--------------~~i~~~~~d~~~~~p------ 155 (254)
+..+||+||||+|..+..+++..+ .+ ++.+|+ +.+++.+++. +|++++.+|.++.+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~-Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KM-VTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SE-EEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CE-EEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 568999999999999999998765 66 999999 8888876532 279999999987632
Q ss_pred C-ccEEEecccc-c-cCCHH--HHHHHHHHH----HHhCCCCCEEEEEc
Q 025363 156 A-ADAIFMKWVL-T-TWTDD--ECKLIMENC----YKALPAGGKLIACE 195 (254)
Q Consensus 156 ~-~D~v~~~~vl-h-~~~~~--~~~~il~~~----~~~L~pgG~l~i~d 195 (254)
+ .|+|++--.- . ..... ...++++.+ +++|+|||.+++.-
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 2 3999985321 1 00010 113455555 99999999998754
No 254
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.54 E-value=3.3e-08 Score=85.14 Aligned_cols=98 Identities=19% Similarity=0.090 Sum_probs=74.3
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------C-CcEEEeCCCCCCCC------C-ccE
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-------P-GVTHIGGDMFKSIP------A-ADA 159 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~-~i~~~~~d~~~~~p------~-~D~ 159 (254)
.++.+|||+|||+|.++..+++.. ..+ ++++|+ +.+++.++++ . +++++.+|+++..+ . .|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~-V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQ-VVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCE-EEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCE
Confidence 357899999999999999999874 346 999999 8888776643 2 68999999977532 2 399
Q ss_pred EEecccc--------ccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 160 IFMKWVL--------TTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 160 v~~~~vl--------h~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
|++.-.. +.. .....+++.++.+.|+|||.|++...
T Consensus 297 Ii~dpP~~~~~~~~~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGA-CRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp EEECCSSTTTCSSSSSCC-CTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEECCCCCCCChhHHHHH-HHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9985321 111 14567899999999999999988653
No 255
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.53 E-value=2.1e-07 Score=76.65 Aligned_cols=80 Identities=13% Similarity=0.163 Sum_probs=63.7
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCC-CCC-
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA- 156 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~-~p~- 156 (254)
+.+.+++..+ ..++.+|||||||+|.++..+++. ..+ ++++|+ +.+++.+++. ++++++.+|+.+. ++.
T Consensus 38 i~~~Iv~~l~-~~~~~~VLEIG~G~G~lT~~La~~--~~~-V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~ 113 (295)
T 3gru_A 38 FVNKAVESAN-LTKDDVVLEIGLGKGILTEELAKN--AKK-VYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKL 113 (295)
T ss_dssp HHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSE-EEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGS
T ss_pred HHHHHHHhcC-CCCcCEEEEECCCchHHHHHHHhc--CCE-EEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccC
Confidence 4566777774 777889999999999999999998 346 999999 8888776653 6899999999985 555
Q ss_pred -ccEEEeccccc
Q 025363 157 -ADAIFMKWVLT 167 (254)
Q Consensus 157 -~D~v~~~~vlh 167 (254)
.|+|+++...+
T Consensus 114 ~fD~Iv~NlPy~ 125 (295)
T 3gru_A 114 DFNKVVANLPYQ 125 (295)
T ss_dssp CCSEEEEECCGG
T ss_pred CccEEEEeCccc
Confidence 39988765443
No 256
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.53 E-value=3.1e-07 Score=78.03 Aligned_cols=151 Identities=14% Similarity=0.112 Sum_probs=88.8
Q ss_pred CCeEEEecCcccHHHHHHHHH-----------------cCCCCeEEEeech-----------H-HHhhC----CCCCCcE
Q 025363 98 VKRLVDVGGSAGDCLRMILQK-----------------HRFICEGINFDLP-----------E-VVAEA----PSIPGVT 144 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~-----------------~~~~~~~~~~D~~-----------~-~~~~~----~~~~~i~ 144 (254)
..+|+|+||++|..+..+... .|..+ ++.-|+| + +.+.. ....+-.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~-v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~ 131 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQ-IFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSC 131 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEE-EEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceE-EEecCCCccchHHHHhhhhhhHhhhhhhccCCCCce
Confidence 688999999999999887776 35556 7777877 1 11111 0111223
Q ss_pred E---EeCCCCCC-CCCc--cEEEeccccccCCHH-------------------------HH------------HHHHHHH
Q 025363 145 H---IGGDMFKS-IPAA--DAIFMKWVLTTWTDD-------------------------EC------------KLIMENC 181 (254)
Q Consensus 145 ~---~~~d~~~~-~p~~--D~v~~~~vlh~~~~~-------------------------~~------------~~il~~~ 181 (254)
| +.++|... +|.. |+|+.+.+||-.++. .+ ..+|+..
T Consensus 132 f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 132 LIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 55677666 6765 999999999944321 11 1237888
Q ss_pred HHhCCCCCEEEEEccccCCC--CCChhhhhhcccchHhhhhc--------cccCceecCHHHHHHHHHhCC-CCeeeEE
Q 025363 182 YKALPAGGKLIACEPVLPDD--SNESQRTRALLEGDIFVMTI--------YRAKGNHRTEQEFKQLGFFAG-FPHLRLY 249 (254)
Q Consensus 182 ~~~L~pgG~l~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~t~~e~~~ll~~aG-f~~~~~~ 249 (254)
++.|+|||++++.-....+. ...........+.++....+ ....-..++.+|++++++++| |++..+.
T Consensus 212 a~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 212 SEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp HHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred HHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEE
Confidence 99999999999876554432 10000001111111111100 000112368999999999985 7776654
No 257
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.50 E-value=8.2e-08 Score=88.28 Aligned_cols=98 Identities=14% Similarity=0.108 Sum_probs=74.2
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--------CCcEEEeCCCCCCC---CC-ccEEEec
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--------PGVTHIGGDMFKSI---PA-ADAIFMK 163 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--------~~i~~~~~d~~~~~---p~-~D~v~~~ 163 (254)
++.+|||+|||+|.++..+++.. ..+ ++.+|+ +.+++.++++ .+++++.+|+++.+ .. .|+|++.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~-V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARS-TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSE-EEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCE-EEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 47899999999999999988753 235 899999 8888877653 37999999998752 23 3999984
Q ss_pred cccc--------cCC-HHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 164 WVLT--------TWT-DDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 164 ~vlh--------~~~-~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
--.. .+. .....++++.+.++|+|||+|++...
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 3211 111 24567899999999999999997554
No 258
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.50 E-value=6.6e-07 Score=75.42 Aligned_cols=153 Identities=12% Similarity=0.131 Sum_probs=88.5
Q ss_pred CCCCeEEEecCcccHHHHHHHHH----------------cCCCCeEEEeechH-HHh----hCCC---CCC---cEEEeC
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQK----------------HRFICEGINFDLPE-VVA----EAPS---IPG---VTHIGG 148 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~----------------~~~~~~~~~~D~~~-~~~----~~~~---~~~---i~~~~~ 148 (254)
+...+|+|+||++|..+..+... .|..+ ++.-|+|. ... .... ..+ +.-+.+
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~-v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpg 128 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQ-IFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPG 128 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEE-EEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEES
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceE-EEecCCCchHHHHHHHhcchhcccCCCEEEEecch
Confidence 34578999999999866544433 34455 77778852 111 1111 012 233567
Q ss_pred CCCCC-CCCc--cEEEeccccccCCH-------------------------------HHHHHHHHHHHHhCCCCCEEEEE
Q 025363 149 DMFKS-IPAA--DAIFMKWVLTTWTD-------------------------------DECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 149 d~~~~-~p~~--D~v~~~~vlh~~~~-------------------------------~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
+|... +|.. |+++.+.+||-.++ .+-..+|+..++.|+|||++++.
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 78776 7765 99999999995432 12345699999999999999886
Q ss_pred ccccCCCCC-C-----hhhhhhcccchHhhhhcc--------ccCceecCHHHHHHHHHhCCC-CeeeEE
Q 025363 195 EPVLPDDSN-E-----SQRTRALLEGDIFVMTIY--------RAKGNHRTEQEFKQLGFFAGF-PHLRLY 249 (254)
Q Consensus 195 d~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~--------~~~~~~~t~~e~~~ll~~aGf-~~~~~~ 249 (254)
-....+... . -+......+.++....+. ...-..++.+|+++++++.|. ++..+.
T Consensus 209 ~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 209 ILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp EEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred EecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEE
Confidence 554433210 0 011011111111111100 001123589999999999965 665543
No 259
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.48 E-value=4.1e-07 Score=73.23 Aligned_cols=84 Identities=20% Similarity=0.238 Sum_probs=63.4
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--CCcEEEeCCCCCC-CCCc--
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFKS-IPAA-- 157 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--~~i~~~~~d~~~~-~p~~-- 157 (254)
+.+.+++..+ ..++.+|||||||+|.++..++++ +..+ ++++|+ +.+++.+++. .+++++.+|+.+. +++.
T Consensus 19 i~~~iv~~~~-~~~~~~VLDiG~G~G~lt~~L~~~-~~~~-v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~ 95 (249)
T 3ftd_A 19 VLKKIAEELN-IEEGNTVVEVGGGTGNLTKVLLQH-PLKK-LYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGK 95 (249)
T ss_dssp HHHHHHHHTT-CCTTCEEEEEESCHHHHHHHHTTS-CCSE-EEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCS
T ss_pred HHHHHHHhcC-CCCcCEEEEEcCchHHHHHHHHHc-CCCe-EEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccC
Confidence 4556777774 677889999999999999999987 3456 999999 8888877664 5789999999875 4431
Q ss_pred cEEEeccccccCC
Q 025363 158 DAIFMKWVLTTWT 170 (254)
Q Consensus 158 D~v~~~~vlh~~~ 170 (254)
+.+++.+.-++.+
T Consensus 96 ~~~vv~NlPy~i~ 108 (249)
T 3ftd_A 96 ELKVVGNLPYNVA 108 (249)
T ss_dssp SEEEEEECCTTTH
T ss_pred CcEEEEECchhcc
Confidence 4555555555443
No 260
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.48 E-value=1.9e-07 Score=81.31 Aligned_cols=99 Identities=13% Similarity=0.144 Sum_probs=70.8
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCC--
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP-- 155 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p-- 155 (254)
.+.+++.++ ..+..+|||+|||+|.++..+++. ..+ ++++|. +.+++.++.+ .+++|+.+|+.+.++
T Consensus 275 ~~~~~~~l~-~~~~~~VLDlgcG~G~~~~~la~~--~~~-V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~ 350 (433)
T 1uwv_A 275 VARALEWLD-VQPEDRVLDLFCGMGNFTLPLATQ--AAS-VVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQ 350 (433)
T ss_dssp HHHHHHHHT-CCTTCEEEEESCTTTTTHHHHHTT--SSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSS
T ss_pred HHHHHHhhc-CCCCCEEEECCCCCCHHHHHHHhh--CCE-EEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhh
Confidence 344555553 566789999999999999999988 456 999999 8888877653 479999999988532
Q ss_pred ----C-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 156 ----A-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 156 ----~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
. .|+|++.---.. +.++++.+.+ ++|++.+++
T Consensus 351 ~~~~~~fD~Vv~dPPr~g-----~~~~~~~l~~-~~p~~ivyv 387 (433)
T 1uwv_A 351 PWAKNGFDKVLLDPARAG-----AAGVMQQIIK-LEPIRIVYV 387 (433)
T ss_dssp GGGTTCCSEEEECCCTTC-----CHHHHHHHHH-HCCSEEEEE
T ss_pred hhhcCCCCEEEECCCCcc-----HHHHHHHHHh-cCCCeEEEE
Confidence 1 399998432221 2245555554 688877766
No 261
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.48 E-value=3.5e-07 Score=74.42 Aligned_cols=91 Identities=9% Similarity=0.005 Sum_probs=65.7
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---CCcEEEeCCCCCC-CCC--
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---PGVTHIGGDMFKS-IPA-- 156 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---~~i~~~~~d~~~~-~p~-- 156 (254)
+.+.+++..+ ..++ +|||||||+|.++..++++. .+ ++++|+ +.+++.+++. .+++++.+|+.+. +++
T Consensus 35 i~~~Iv~~~~-~~~~-~VLEIG~G~G~lt~~L~~~~--~~-V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~ 109 (271)
T 3fut_A 35 HLRRIVEAAR-PFTG-PVFEVGPGLGALTRALLEAG--AE-VTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVP 109 (271)
T ss_dssp HHHHHHHHHC-CCCS-CEEEECCTTSHHHHHHHHTT--CC-EEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSC
T ss_pred HHHHHHHhcC-CCCC-eEEEEeCchHHHHHHHHHcC--CE-EEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhcc
Confidence 3455666664 6777 99999999999999999985 56 999998 8887766543 5799999999875 543
Q ss_pred c-cEEEeccccccCCHHHHHHHHHH
Q 025363 157 A-DAIFMKWVLTTWTDDECKLIMEN 180 (254)
Q Consensus 157 ~-D~v~~~~vlh~~~~~~~~~il~~ 180 (254)
. |.|+. +.-++++.+-..++|..
T Consensus 110 ~~~~iv~-NlPy~iss~il~~ll~~ 133 (271)
T 3fut_A 110 QGSLLVA-NLPYHIATPLVTRLLKT 133 (271)
T ss_dssp TTEEEEE-EECSSCCHHHHHHHHHH
T ss_pred CccEEEe-cCcccccHHHHHHHhcC
Confidence 2 66554 44445565545555544
No 262
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.47 E-value=5.5e-07 Score=78.06 Aligned_cols=90 Identities=8% Similarity=-0.048 Sum_probs=68.0
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCCC-ccEEEeccccc
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA-ADAIFMKWVLT 167 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p~-~D~v~~~~vlh 167 (254)
.++.+|||+|||+|.++..+++. ..+ ++++|. +.+++.++++ . ++|+.+|+.+..+. .|+|++.-.-.
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~-V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFN-VKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRA 364 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTT
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCE-EEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEcCCcc
Confidence 35679999999999999999987 346 999999 8888887654 3 89999999887554 49999854322
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
... ..+++.++ .|+|||.+++.
T Consensus 365 g~~----~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 365 GLH----PRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp CSC----HHHHHHHH-HHCCSEEEEEE
T ss_pred chH----HHHHHHHH-hcCCCcEEEEE
Confidence 221 23555554 48999998885
No 263
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.46 E-value=1.6e-07 Score=76.90 Aligned_cols=98 Identities=18% Similarity=0.237 Sum_probs=74.3
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC-----------CCCcEEEeCCCCCCCCC----ccE
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS-----------IPGVTHIGGDMFKSIPA----ADA 159 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~-----------~~~i~~~~~d~~~~~p~----~D~ 159 (254)
+..++||-||+|.|..+.++++..+..+ ++++|+ |.+++.+++ .+|++++.+|..+.+.. .|+
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~-v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVES-ITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCE-EEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcce-EEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 4568999999999999999998766666 999999 888876653 27999999999987432 299
Q ss_pred EEeccccccCCHH---HHHHHHHHHHHhCCCCCEEEEEc
Q 025363 160 IFMKWVLTTWTDD---ECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 160 v~~~~vlh~~~~~---~~~~il~~~~~~L~pgG~l~i~d 195 (254)
|++-.. .-.... -...+++.|+++|+|||.++..-
T Consensus 161 Ii~D~~-dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 161 IISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEESCC-CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEeCC-CcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 987322 111100 12478999999999999998753
No 264
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.44 E-value=1.6e-07 Score=84.59 Aligned_cols=125 Identities=17% Similarity=0.146 Sum_probs=79.0
Q ss_pred ccccccCchHHHHHHHHHhcCCchhHHHHHhhcC---CCCCCCeEEEecCcccHHHHHHHHHcC----CCCeEEEeechH
Q 025363 60 YSYYGKIPEMNGLMRKAMSGVSVPFMTSVLEGYN---GFKGVKRLVDVGGSAGDCLRMILQKHR----FICEGINFDLPE 132 (254)
Q Consensus 60 ~~~~~~~~~~~~~~~~~m~~~~~~~~~~i~~~~~---~~~~~~~vlDvG~G~G~~~~~l~~~~~----~~~~~~~~D~~~ 132 (254)
||-+++|+-.-..|.+++.. .+.+..+ .......|+|||||+|-++...+++.. +++ +.+++..+
T Consensus 324 YevFEkD~vKy~~Ye~AI~~-------Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vk-VyAVEknp 395 (637)
T 4gqb_A 324 YEVFEKDPIKYSQYQQAIYK-------CLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIK-LYAVEKNP 395 (637)
T ss_dssp HHHHTTCHHHHHHHHHHHHH-------HHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEE-EEEEESCH
T ss_pred hhhhcCChhhHHHHHHHHHH-------HHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcE-EEEEECCH
Confidence 66677788776777776643 1222221 123346799999999999555555432 235 78888733
Q ss_pred HHhhCCCC-------CCcEEEeCCCCCC-CCCc-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEE
Q 025363 133 VVAEAPSI-------PGVTHIGGDMFKS-IPAA-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLI 192 (254)
Q Consensus 133 ~~~~~~~~-------~~i~~~~~d~~~~-~p~~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~ 192 (254)
+...+++. ++|+++.+|+.+- +|+. |+||.-..=...-.|....+|....+.|||||.++
T Consensus 396 ~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 396 NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 43333321 7899999999986 7875 99997332111111333467888889999999753
No 265
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.41 E-value=3.2e-07 Score=73.98 Aligned_cols=91 Identities=11% Similarity=0.072 Sum_probs=62.7
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCC-CCC-
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA- 156 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~-~p~- 156 (254)
+.+.+++..+ ..++.+|||||||+|.++. +. +.+..+ ++++|+ +.+++.+++. ++++++.+|+.+. +++
T Consensus 9 i~~~iv~~~~-~~~~~~VLEIG~G~G~lt~-l~-~~~~~~-v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~ 84 (252)
T 1qyr_A 9 VIDSIVSAIN-PQKGQAMVEIGPGLAALTE-PV-GERLDQ-LTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGEL 84 (252)
T ss_dssp HHHHHHHHHC-CCTTCCEEEECCTTTTTHH-HH-HTTCSC-EEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHH
T ss_pred HHHHHHHhcC-CCCcCEEEEECCCCcHHHH-hh-hCCCCe-EEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHh
Confidence 4556677664 6778899999999999999 54 555656 899999 8888887664 4799999999874 332
Q ss_pred -----ccEEEeccccccCCHHHHHHHH
Q 025363 157 -----ADAIFMKWVLTTWTDDECKLIM 178 (254)
Q Consensus 157 -----~D~v~~~~vlh~~~~~~~~~il 178 (254)
.+.+++.+.-.+.+.+-..+++
T Consensus 85 ~~~~~~~~~vvsNlPY~i~~~il~~ll 111 (252)
T 1qyr_A 85 AEKMGQPLRVFGNLPYNISTPLMFHLF 111 (252)
T ss_dssp HHHHTSCEEEEEECCTTTHHHHHHHHH
T ss_pred hcccCCceEEEECCCCCccHHHHHHHH
Confidence 2344444544444433333333
No 266
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.38 E-value=1.4e-06 Score=70.04 Aligned_cols=106 Identities=12% Similarity=0.084 Sum_probs=65.5
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeech-HHHhhCCCC----CCcEEEeCCCCC-CCCC--c
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLP-EVVAEAPSI----PGVTHIGGDMFK-SIPA--A 157 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~----~~i~~~~~d~~~-~~p~--~ 157 (254)
.++.+.. .+++..+|||+|||+|.++..++++.+-.. +.++|+. .+....... .++.....++.. .++. .
T Consensus 64 ~ei~ek~-~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~-v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~ 141 (277)
T 3evf_A 64 RWFHERG-YVKLEGRVIDLGCGRGGWCYYAAAQKEVSG-VKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKC 141 (277)
T ss_dssp HHHHHTT-SSCCCEEEEEETCTTCHHHHHHHTSTTEEE-EEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCC
T ss_pred HHHHHhC-CCCCCCEEEEecCCCCHHHHHHHHhcCCCc-ceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCc
Confidence 3455554 477888999999999999998887754434 5556652 221111111 134444444322 2333 3
Q ss_pred cEEEeccccc---cCCHH-HHHHHHHHHHHhCCCC-CEEEE
Q 025363 158 DAIFMKWVLT---TWTDD-ECKLIMENCYKALPAG-GKLIA 193 (254)
Q Consensus 158 D~v~~~~vlh---~~~~~-~~~~il~~~~~~L~pg-G~l~i 193 (254)
|+|++....+ .+-|. ....+|+.+.+.|+|| |.+++
T Consensus 142 DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 142 DTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred cEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 9999876555 12222 2335689999999999 99888
No 267
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.36 E-value=1.9e-07 Score=76.41 Aligned_cols=67 Identities=10% Similarity=0.148 Sum_probs=55.5
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCC--CCeEEEeec-hHHHhhCCCC--CCcEEEeCCCCCC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRF--ICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFKS 153 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~--~~~~~~~D~-~~~~~~~~~~--~~i~~~~~d~~~~ 153 (254)
.+.+++..+ ..++.+|||||||+|.++..++++.+. .+ ++++|+ +.+++.+++. .+++++.+|+.+.
T Consensus 31 ~~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~-V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 31 IDAIVAAIR-PERGERMVEIGPGLGALTGPVIARLATPGSP-LHAVELDRDLIGRLEQRFGELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHC-CCTTCEEEEECCTTSTTHHHHHHHHCBTTBC-EEEEECCHHHHHHHHHHHGGGEEEEESCGGGC
T ss_pred HHHHHHhcC-CCCcCEEEEEccccHHHHHHHHHhCCCcCCe-EEEEECCHHHHHHHHHhcCCCcEEEECChhcC
Confidence 455666664 677889999999999999999998765 67 899999 8888877654 6899999999875
No 268
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.34 E-value=2.1e-06 Score=71.93 Aligned_cols=146 Identities=12% Similarity=0.080 Sum_probs=102.3
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCC---------------------------CCCcEEEeC
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPS---------------------------IPGVTHIGG 148 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~---------------------------~~~i~~~~~ 148 (254)
.+...|+.+|||.......+...+++++ ++-+|.|++++.-++ .+++.++..
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~-~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLA-YVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEE-EEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCE-EEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 3568999999999999999998888877 888898887654321 157899999
Q ss_pred CCCCC-C--------C--Cc-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchH
Q 025363 149 DMFKS-I--------P--AA-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDI 216 (254)
Q Consensus 149 d~~~~-~--------p--~~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~ 216 (254)
|+.+. . + .. .++++-.+|..++.+++.++++.+.+.. |+|.+++.|.+.+..+...........+.-
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m~~~l~~ 253 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIMQSNLKE 253 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHHHHHhhc
Confidence 99873 2 1 22 7888999999999999999999999987 788888889877632221111100000000
Q ss_pred hhhhccccC-ceecCHHHHHHHHHhCCCC
Q 025363 217 FVMTIYRAK-GNHRTEQEFKQLGFFAGFP 244 (254)
Q Consensus 217 ~~~~~~~~~-~~~~t~~e~~~ll~~aGf~ 244 (254)
. ......+ ....+.++..+.|+++||+
T Consensus 254 ~-rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 254 S-RNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp H-HCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred c-cCCcccccccCCCHHHHHHHHHHCCCC
Confidence 0 0000111 1235889999999999997
No 269
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.28 E-value=6.7e-07 Score=72.18 Aligned_cols=66 Identities=14% Similarity=0.175 Sum_probs=54.3
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS 153 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~ 153 (254)
+.+.+++..+ ..++.+|||||||+|.++..++++. .+ ++++|+ +.+++.+++. ++++++.+|+.+.
T Consensus 17 i~~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~--~~-V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 17 VLQKIVSAIH-PQKTDTLVEIGPGRGALTDYLLTEC--DN-LALVEIDRDLVAFLQKKYNQQKNITIYQNDALQF 87 (255)
T ss_dssp HHHHHHHHHC-CCTTCEEEEECCTTTTTHHHHTTTS--SE-EEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTC
T ss_pred HHHHHHHhcC-CCCcCEEEEEcccccHHHHHHHHhC--CE-EEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhC
Confidence 4556677774 7778899999999999999999885 46 999999 8888776543 6899999999885
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.25 E-value=8.9e-07 Score=73.14 Aligned_cols=79 Identities=22% Similarity=0.192 Sum_probs=62.1
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----CCcEEEeCCCCCC---C
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS---I 154 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----~~i~~~~~d~~~~---~ 154 (254)
+.+.+++.++ ..++.+|||+|||+|..+..+++++|+.+ ++++|. +.+++.++++ .+++++.+|+.+. +
T Consensus 14 Ll~e~l~~L~-~~~g~~vLD~g~G~G~~s~~la~~~~~~~-VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l 91 (301)
T 1m6y_A 14 MVREVIEFLK-PEDEKIILDCTVGEGGHSRAILEHCPGCR-IIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLL 91 (301)
T ss_dssp THHHHHHHHC-CCTTCEEEETTCTTSHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHH
T ss_pred HHHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHH
Confidence 4556666664 67788999999999999999999998778 999999 8888877643 5899999998653 1
Q ss_pred C-----CccEEEecc
Q 025363 155 P-----AADAIFMKW 164 (254)
Q Consensus 155 p-----~~D~v~~~~ 164 (254)
+ ..|.|++.-
T Consensus 92 ~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 92 KTLGIEKVDGILMDL 106 (301)
T ss_dssp HHTTCSCEEEEEEEC
T ss_pred HhcCCCCCCEEEEcC
Confidence 1 238888643
No 271
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.24 E-value=2.9e-06 Score=78.09 Aligned_cols=111 Identities=12% Similarity=-0.009 Sum_probs=77.6
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc------------------------------------------CC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH------------------------------------------RF 121 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~------------------------------------------~~ 121 (254)
++..++... .|.++..|+|.+||+|.++++.+... +.
T Consensus 178 LAa~ll~~~-~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 178 LAAAIVMRS-GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHHT-TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhh-CCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 455566666 48888999999999999999877652 23
Q ss_pred CCeEEEeec-hHHHhhCCCC-------CCcEEEeCCCCCC-CC----CccEEEec--cccccCCHHHHHHHHHHHHHh--
Q 025363 122 ICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IP----AADAIFMK--WVLTTWTDDECKLIMENCYKA-- 184 (254)
Q Consensus 122 ~~~~~~~D~-~~~~~~~~~~-------~~i~~~~~d~~~~-~p----~~D~v~~~--~vlh~~~~~~~~~il~~~~~~-- 184 (254)
.+ ++++|+ +.+++.++.+ +.|+|..+|+.+. .| ..|+|+++ +-...-..++...+.+.+.+.
T Consensus 257 ~~-i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 257 SH-FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp CC-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHH
T ss_pred cc-EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHH
Confidence 57 999999 8898887754 4589999999875 23 23999986 322222234445555555444
Q ss_pred -CCCCCEEEEEcc
Q 025363 185 -LPAGGKLIACEP 196 (254)
Q Consensus 185 -L~pgG~l~i~d~ 196 (254)
+.|||++++...
T Consensus 336 ~~~~g~~~~ilt~ 348 (703)
T 3v97_A 336 NQFGGWNLSLFSA 348 (703)
T ss_dssp HHCTTCEEEEEES
T ss_pred hhCCCCeEEEEeC
Confidence 458999988743
No 272
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.21 E-value=3.5e-06 Score=69.91 Aligned_cols=109 Identities=10% Similarity=0.004 Sum_probs=73.9
Q ss_pred HHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCC----
Q 025363 88 VLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP---- 155 (254)
Q Consensus 88 i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p---- 155 (254)
++..++ ..++.+|||+|||+|..+..+++.. +..+ ++++|+ +.+++.++++ .+|+++.+|+.+..+
T Consensus 94 ~~~~l~-~~~g~~VLDlcaG~G~kt~~la~~~~~~g~-V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~ 171 (309)
T 2b9e_A 94 PAMLLD-PPPGSHVIDACAAPGNKTSHLAALLKNQGK-IFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPR 171 (309)
T ss_dssp HHHHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGG
T ss_pred HHHHhC-CCCCCEEEEeCCChhHHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccc
Confidence 344443 6678899999999999999999986 4567 999999 8777766543 579999999876421
Q ss_pred -C-ccEEEec------ccccc---------CCHHH-------HHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 156 -A-ADAIFMK------WVLTT---------WTDDE-------CKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 156 -~-~D~v~~~------~vlh~---------~~~~~-------~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
. .|.|++. .++.. |+.++ -.++|+++.+.++ ||+|+.....+.
T Consensus 172 ~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 172 YHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp GTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred cCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 1 3998861 12221 11111 1357888888886 999888665543
No 273
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.19 E-value=1.9e-06 Score=77.89 Aligned_cols=125 Identities=14% Similarity=0.047 Sum_probs=77.4
Q ss_pred ccccccCchHHHHHHHHHhcCCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-------------CCCCeEE
Q 025363 60 YSYYGKIPEMNGLMRKAMSGVSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-------------RFICEGI 126 (254)
Q Consensus 60 ~~~~~~~~~~~~~~~~~m~~~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------------~~~~~~~ 126 (254)
||-+.+|+..-..|.+++... +.+.++.-.....|||||||+|.++...+++. ...+ ++
T Consensus 379 Ye~fekD~vRy~~Y~~AI~~a-------l~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~k-Vy 450 (745)
T 3ua3_A 379 YNTFEQDQIKYDVYGEAVVGA-------LKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVK-LY 450 (745)
T ss_dssp HHHHHHCHHHHHHHHHHHHHH-------HHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEE-EE
T ss_pred HHHHcCChhhHHHHHHHHHHH-------HHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccE-EE
Confidence 555667777666777766542 11222111235689999999999975443332 1235 88
Q ss_pred Eeec-hHHHhhCCC------CCCcEEEeCCCCCC-C------CC-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEE
Q 025363 127 NFDL-PEVVAEAPS------IPGVTHIGGDMFKS-I------PA-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKL 191 (254)
Q Consensus 127 ~~D~-~~~~~~~~~------~~~i~~~~~d~~~~-~------p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l 191 (254)
+++. |......+. .++|+++.+|+.+- . |+ .|+|+.-..=.....+-....|..+.+.|||||.+
T Consensus 451 AVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~ 530 (745)
T 3ua3_A 451 IVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTIS 530 (745)
T ss_dssp EEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEE
T ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEE
Confidence 8887 543322221 16799999999876 6 55 49999755422112233456778888999999975
Q ss_pred E
Q 025363 192 I 192 (254)
Q Consensus 192 ~ 192 (254)
+
T Consensus 531 i 531 (745)
T 3ua3_A 531 I 531 (745)
T ss_dssp E
T ss_pred E
Confidence 4
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.18 E-value=2.8e-06 Score=68.62 Aligned_cols=99 Identities=9% Similarity=0.130 Sum_probs=68.8
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-h-------HHHhhCCCC-------CCcEEEeCCCCCC---CC-
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-P-------EVVAEAPSI-------PGVTHIGGDMFKS---IP- 155 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~-------~~~~~~~~~-------~~i~~~~~d~~~~---~p- 155 (254)
..++.+|||+|||+|..+..+++. +.+ ++++|+ + .+++.++.+ ++|+++.+|+.+. ++
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~--g~~-V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL--GLT-VTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT--TCC-EEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh--CCE-EEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhc
Confidence 445689999999999999999986 467 999999 8 777777653 4699999999764 23
Q ss_pred --C-ccEEEeccccccCC------------------HHHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 156 --A-ADAIFMKWVLTTWT------------------DDECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 156 --~-~D~v~~~~vlh~~~------------------~~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
. .|+|++.-.+++-. +.+...+++.+.++.+ .++++-.+..
T Consensus 158 ~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~--~~vvvk~p~~ 219 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAK--KRVVVKRPRL 219 (258)
T ss_dssp HHCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCS--SEEEEEEETT
T ss_pred cCCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcC--cEEEEEcCCC
Confidence 3 49999865444321 1234556667777764 3666655443
No 275
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.10 E-value=3.3e-06 Score=68.04 Aligned_cols=108 Identities=12% Similarity=0.036 Sum_probs=68.3
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC----CCC-cEEEeC-CCCCCCCC-
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS----IPG-VTHIGG-DMFKSIPA- 156 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~----~~~-i~~~~~-d~~~~~p~- 156 (254)
..++.+.+ .+.+..+|||+|||+|.++...++..+-.. ++++|+ ..+...... ..+ +.+... |+....+.
T Consensus 79 L~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~s-V~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~ 156 (282)
T 3gcz_A 79 LRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKNVKK-VMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIP 156 (282)
T ss_dssp HHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTTEEE-EEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCC
T ss_pred HHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcCCCe-eeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCC
Confidence 45566777 488889999999999999999887765545 777777 332212111 112 233322 43322233
Q ss_pred ccEEEeccccc----cCCHHHHHHHHHHHHHhCCCC--CEEEEE
Q 025363 157 ADAIFMKWVLT----TWTDDECKLIMENCYKALPAG--GKLIAC 194 (254)
Q Consensus 157 ~D~v~~~~vlh----~~~~~~~~~il~~~~~~L~pg--G~l~i~ 194 (254)
.|+|++-...+ .........+|+-+.+.|+|| |.+++-
T Consensus 157 ~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 157 GDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 49999866655 111122335788889999999 998873
No 276
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.10 E-value=2.4e-06 Score=72.69 Aligned_cols=98 Identities=12% Similarity=-0.006 Sum_probs=67.7
Q ss_pred HHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCC---C
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSI---P 155 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~---p 155 (254)
..+++..+ .. +.+|||+|||+|.++..+++.. .+ ++++|. +.+++.++++ ++++|+.+|+.+.. +
T Consensus 204 ~~~~~~~~-~~-~~~vLDl~cG~G~~~l~la~~~--~~-V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~ 278 (369)
T 3bt7_A 204 EWALDVTK-GS-KGDLLELYCGNGNFSLALARNF--DR-VLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMN 278 (369)
T ss_dssp HHHHHHTT-TC-CSEEEEESCTTSHHHHHHGGGS--SE-EEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHS
T ss_pred HHHHHHhh-cC-CCEEEEccCCCCHHHHHHHhcC--CE-EEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHh
Confidence 33444443 33 4689999999999999988753 35 999999 8888877653 57999999986542 1
Q ss_pred ----------------CccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 156 ----------------AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 156 ----------------~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
..|+|++.---. .+.+++.+.|+|+|+++++..
T Consensus 279 ~~~~~~~l~~~~~~~~~fD~Vv~dPPr~--------g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 279 GVREFNRLQGIDLKSYQCETIFVDPPRS--------GLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp SCCCCTTGGGSCGGGCCEEEEEECCCTT--------CCCHHHHHHHTTSSEEEEEES
T ss_pred hccccccccccccccCCCCEEEECcCcc--------ccHHHHHHHHhCCCEEEEEEC
Confidence 239988732211 123456666778999888654
No 277
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.06 E-value=2.1e-06 Score=73.17 Aligned_cols=92 Identities=9% Similarity=-0.090 Sum_probs=70.0
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---------------------CCcEEEeCCCCCCC
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---------------------PGVTHIGGDMFKSI 154 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---------------------~~i~~~~~d~~~~~ 154 (254)
++.+|||+|||+|..+..++++.+..+ ++.+|+ +..++.++++ .+++++.+|+.+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~-V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEE-VWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSE-EEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 367999999999999999999988778 999999 7776655532 13888999986642
Q ss_pred ---CC-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 155 ---PA-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 155 ---p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
+. .|+|++.- .. ....++..+.+.|+|||.|++.-
T Consensus 126 ~~~~~~fD~I~lDP-~~-----~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDP-FG-----SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECC-SS-----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCC-CC-----CHHHHHHHHHHhcCCCCEEEEEe
Confidence 33 39988632 22 12478999999999999877753
No 278
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.04 E-value=3.8e-06 Score=74.97 Aligned_cols=110 Identities=13% Similarity=0.071 Sum_probs=76.7
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcC------------------CCCeEEEeec-hHHHhhCCCC----
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHR------------------FICEGINFDL-PEVVAEAPSI---- 140 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~------------------~~~~~~~~D~-~~~~~~~~~~---- 140 (254)
+++.+++..+ ..++.+|+|.+||+|.++..+.+... ... ++++|+ +.+.+.++.+
T Consensus 157 iv~~mv~~l~-p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~-i~GiEid~~~~~lA~~nl~l~ 234 (541)
T 2ar0_A 157 LIKTIIHLLK-PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRA-FIGLELVPGTRRLALMNCLLH 234 (541)
T ss_dssp HHHHHHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTS-EEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhc-cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcce-EEEEcCCHHHHHHHHHHHHHh
Confidence 3444566664 55678999999999999998887632 236 899998 7776655431
Q ss_pred --CC-----cEEEeCCCCCCC--C--CccEEEeccccccCC------------HHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 141 --PG-----VTHIGGDMFKSI--P--AADAIFMKWVLTTWT------------DDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 141 --~~-----i~~~~~d~~~~~--p--~~D~v~~~~vlh~~~------------~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
.. +.+..+|.+... + ..|+|+++--+.... ...-..++.++.+.|+|||++.++-
T Consensus 235 gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 235 DIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp TCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 32 788999988752 2 249999864443211 1122478999999999999988864
No 279
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.00 E-value=3.2e-05 Score=65.06 Aligned_cols=96 Identities=14% Similarity=0.091 Sum_probs=68.8
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeCCCCCCCC-Cc--cEEEeccccccCCH
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIP-AA--DAIFMKWVLTTWTD 171 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~~p-~~--D~v~~~~vlh~~~~ 171 (254)
++++.++||+||++|.++..++++ +.+ ++++|..++.......++|+++.+|.++..| .. |+|++-.+.+ .
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~-V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~---p 282 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMW-VYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEK---P 282 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCE-EEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSC---H
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCE-EEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCC---h
Confidence 467899999999999999999988 567 9999985554444445899999999999844 33 9998866653 3
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 172 DECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 172 ~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.....++.+.......++.++....
T Consensus 283 ~~~~~l~~~wl~~~~~~~aI~~lKL 307 (375)
T 4auk_A 283 AKVAALMAQWLVNGWCRETIFNLKL 307 (375)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEC
T ss_pred HHhHHHHHHHHhccccceEEEEEEe
Confidence 4444555554444444555554443
No 280
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.95 E-value=1.1e-06 Score=75.18 Aligned_cols=93 Identities=11% Similarity=-0.023 Sum_probs=70.5
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCC-CCeEEEeec-hHHHhhCCCC-------CC-cEEEeCCCCCCC----CC-ccEE
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRF-ICEGINFDL-PEVVAEAPSI-------PG-VTHIGGDMFKSI----PA-ADAI 160 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~-~~~~~~~D~-~~~~~~~~~~-------~~-i~~~~~d~~~~~----p~-~D~v 160 (254)
.++.+|||++||+|..+..++++.++ .+ ++.+|+ +..++.++++ ++ ++++.+|.++.. +. .|+|
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~-V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V 129 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEK-AYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYV 129 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEE-EEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEE
Confidence 34689999999999999999998655 35 899999 8777776653 34 899999986543 22 3999
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 161 FMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 161 ~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
++.- .. ....+++.+.+.|+|||.|++.-
T Consensus 130 ~lDP-~g-----~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 130 DLDP-FG-----TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EECC-SS-----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECC-Cc-----CHHHHHHHHHHHhCCCCEEEEEe
Confidence 8854 21 11368899999999999877754
No 281
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=97.89 E-value=0.00024 Score=59.31 Aligned_cols=148 Identities=12% Similarity=0.109 Sum_probs=100.4
Q ss_pred CCCeEEEecCcccHHHHHHHHH-cCCCCeEEEeechHHHhhCC-----------------------------CCCCcEEE
Q 025363 97 GVKRLVDVGGSAGDCLRMILQK-HRFICEGINFDLPEVVAEAP-----------------------------SIPGVTHI 146 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~-----------------------------~~~~i~~~ 146 (254)
+...|+-+|||.-.....+... .++++ .+-+|.|++++.-+ ...+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~-~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSK-YFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSE-EEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCe-EEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4679999999999999998875 35667 88889888766321 12578899
Q ss_pred eCCCCCC--C---------C-Cc-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhccc
Q 025363 147 GGDMFKS--I---------P-AA-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLE 213 (254)
Q Consensus 147 ~~d~~~~--~---------p-~~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~ 213 (254)
..|+.+. + + .. -++++-.+|..++.+++..+|+.+.+... +|.+++.|...+.. +. ...+.
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~i~p~d---~f-g~~M~- 242 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQVNMGD---RF-GQIMI- 242 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEECCTTS---HH-HHHHH-
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEeccCCCC---HH-HHHHH-
Confidence 9999762 2 1 12 57888889999999999999999999875 56666778875533 11 11100
Q ss_pred chHhhhhccccC-ceecCHHHHHHHHHhCCCCeeeEEEc
Q 025363 214 GDIFVMTIYRAK-GNHRTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 214 ~~~~~~~~~~~~-~~~~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
-.+......+.+ ....+.++..+.|+++||+.+++.++
T Consensus 243 ~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 243 ENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp HHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred HHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 001000000011 12347888999999999998777654
No 282
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.87 E-value=5.9e-05 Score=61.17 Aligned_cols=106 Identities=12% Similarity=0.065 Sum_probs=64.5
Q ss_pred HHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC----C-CCcEEEeC-CCCCCCCC-cc
Q 025363 87 SVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS----I-PGVTHIGG-DMFKSIPA-AD 158 (254)
Q Consensus 87 ~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~----~-~~i~~~~~-d~~~~~p~-~D 158 (254)
++.+. .-+.++.+|||+||++|.++..+++..+-.. ++++|+ ..+...... . +-+.+..+ |++...+. .|
T Consensus 72 ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~s-V~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~D 149 (300)
T 3eld_A 72 WLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMS-VKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSD 149 (300)
T ss_dssp HHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEE-EEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCS
T ss_pred HHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCce-eeeEEeccccccccccccccCCceEEeecCceeeecCCCCcC
Confidence 33444 3467889999999999999999998755445 677777 222111110 0 11333333 44332333 49
Q ss_pred EEEeccccc----cCCHHHHHHHHHHHHHhCCCC-CEEEEE
Q 025363 159 AIFMKWVLT----TWTDDECKLIMENCYKALPAG-GKLIAC 194 (254)
Q Consensus 159 ~v~~~~vlh----~~~~~~~~~il~~~~~~L~pg-G~l~i~ 194 (254)
+|++.-.-+ .........+|+-+.+.|+|| |.+++-
T Consensus 150 lVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 150 TLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred EEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 999855544 111112245688889999999 998874
No 283
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.84 E-value=1e-05 Score=68.34 Aligned_cols=96 Identities=16% Similarity=0.130 Sum_probs=69.6
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--------------CCcEEEeCCCCCCCC------
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--------------PGVTHIGGDMFKSIP------ 155 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--------------~~i~~~~~d~~~~~p------ 155 (254)
+.++||=||+|.|..+.++++. |..+ ++.+|+ |.+++.+++. +|++++.+|..+.+.
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~-V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKM-VTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSE-EEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCce-eEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 4679999999999999999975 4456 999999 8888776531 568999999876531
Q ss_pred -CccEEEeccccc-------cCC-HHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 156 -AADAIFMKWVLT-------TWT-DDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 156 -~~D~v~~~~vlh-------~~~-~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
..|+|++--.-. ..+ ..-..++++.++++|+|||.++..
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 139998742110 000 112357899999999999998774
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.79 E-value=0.00011 Score=67.60 Aligned_cols=101 Identities=13% Similarity=0.022 Sum_probs=67.5
Q ss_pred CCCCCeEEEecCcccHHHHHHHHHcC---CCCeEEEeec-hHHHhhC--C----C------CCCcEEEeCCCCCC--CC-
Q 025363 95 FKGVKRLVDVGGSAGDCLRMILQKHR---FICEGINFDL-PEVVAEA--P----S------IPGVTHIGGDMFKS--IP- 155 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~~~~~---~~~~~~~~D~-~~~~~~~--~----~------~~~i~~~~~d~~~~--~p- 155 (254)
+.++.+|+|.|||+|.++..+++..+ ..+ ++++|+ +.+++.+ + . .....+...|+.+. .+
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~-IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~ 397 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQ-IWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDF 397 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGG-EEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGG
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCe-EEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccccccc
Confidence 34578999999999999999999876 346 899998 7666555 1 1 02235666666653 12
Q ss_pred -CccEEEecccc--ccCCHHH-------------------------HHHHHHHHHHhCCCCCEEEEEcc
Q 025363 156 -AADAIFMKWVL--TTWTDDE-------------------------CKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 156 -~~D~v~~~~vl--h~~~~~~-------------------------~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
..|+|+++=-. ....+.. ...+++++.+.|+|||++.++-+
T Consensus 398 ~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 398 ANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp TTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 23999984333 1111111 23478889999999999887543
No 285
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.73 E-value=0.00011 Score=57.52 Aligned_cols=111 Identities=12% Similarity=0.087 Sum_probs=73.6
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHH-Hh-----hCCCCCCcEEEeC-CCCCCCCC-
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEV-VA-----EAPSIPGVTHIGG-DMFKSIPA- 156 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~-~~-----~~~~~~~i~~~~~-d~~~~~p~- 156 (254)
...+.+.+ .+.+..+|||+||++|.++...+....-.+ +.++|+... .+ +..-.+.|+|..+ |++.-.|.
T Consensus 67 L~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g~~~-V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~ 144 (267)
T 3p8z_A 67 LQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKKVTE-VRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEK 144 (267)
T ss_dssp HHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTTEEE-EEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCC
T ss_pred HHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcCCCE-EEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCcc
Confidence 45677777 588899999999999999998888765556 899998322 11 1111277999999 97655443
Q ss_pred ccEEEeccccccCC---HH-HHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 157 ADAIFMKWVLTTWT---DD-ECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 157 ~D~v~~~~vlh~~~---~~-~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
.|+++|--.=..=+ ++ ...++|+-+.+.|++ |-+++ ....+
T Consensus 145 ~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~-KVl~p 189 (267)
T 3p8z_A 145 CDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI-KVLNP 189 (267)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE-EESCC
T ss_pred ccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE-EEccC
Confidence 49998843322111 11 223477777899998 67666 43333
No 286
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.69 E-value=1.4e-05 Score=71.28 Aligned_cols=109 Identities=16% Similarity=0.077 Sum_probs=71.9
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcC---------------CCCeEEEeec-hHHHhhCCCC-------
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHR---------------FICEGINFDL-PEVVAEAPSI------- 140 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~---------------~~~~~~~~D~-~~~~~~~~~~------- 140 (254)
+++-+++.+. ..+ .+|+|.+||+|.++..+++... ... +.++|+ +.+...++.+
T Consensus 233 Vv~lmv~ll~-p~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~-i~G~Eid~~~~~lA~~Nl~l~gi~ 309 (544)
T 3khk_A 233 IVTLIVEMLE-PYK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQIS-VYGQESNPTTWKLAAMNMVIRGID 309 (544)
T ss_dssp HHHHHHHHHC-CCS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEE-EEECCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHh-cCC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhce-EEEEeCCHHHHHHHHHHHHHhCCC
Confidence 3455556554 333 3999999999999988765432 345 899998 7776665532
Q ss_pred CCcEEEeCCCCCC--CCC--ccEEEeccccc--cCCHH-------------------------HHHHHHHHHHHhCCCCC
Q 025363 141 PGVTHIGGDMFKS--IPA--ADAIFMKWVLT--TWTDD-------------------------ECKLIMENCYKALPAGG 189 (254)
Q Consensus 141 ~~i~~~~~d~~~~--~p~--~D~v~~~~vlh--~~~~~-------------------------~~~~il~~~~~~L~pgG 189 (254)
.++.+..+|.+.. .+. .|+|+++=-+. .|..+ .-..+++++.+.|+|||
T Consensus 310 ~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gG 389 (544)
T 3khk_A 310 FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTG 389 (544)
T ss_dssp CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEE
T ss_pred cccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCc
Confidence 3355578888765 222 39999843322 23211 11258999999999999
Q ss_pred EEEEEc
Q 025363 190 KLIACE 195 (254)
Q Consensus 190 ~l~i~d 195 (254)
++.++-
T Consensus 390 r~aiVl 395 (544)
T 3khk_A 390 SMALLL 395 (544)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 987753
No 287
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.69 E-value=0.0001 Score=58.55 Aligned_cols=106 Identities=15% Similarity=0.063 Sum_probs=63.9
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHH--cCCCC-eEEEeechHHHhhCCCC-CCc---EEEeC-CCCCCCCC
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQK--HRFIC-EGINFDLPEVVAEAPSI-PGV---THIGG-DMFKSIPA 156 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~--~~~~~-~~~~~D~~~~~~~~~~~-~~i---~~~~~-d~~~~~p~ 156 (254)
..+|-+.+ -++++.+|||+||+.|.++...++. ..... ++++.|+ ++ ...... ..+ .|..+ |+++..+.
T Consensus 62 L~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~-~P~~~~~~Gv~~i~~~~G~Df~~~~~~ 138 (269)
T 2px2_A 62 LRWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HE-EPMLMQSYGWNIVTMKSGVDVFYKPSE 138 (269)
T ss_dssp HHHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SC-CCCCCCSTTGGGEEEECSCCGGGSCCC
T ss_pred HHHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-cc-CCCcccCCCceEEEeeccCCccCCCCC
Confidence 44566666 5889999999999999999998876 21111 0234442 11 111111 344 45557 99875443
Q ss_pred -ccEEEeccccc--cCCHHH--HHHHHHHHHHhCCCCC-EEEE
Q 025363 157 -ADAIFMKWVLT--TWTDDE--CKLIMENCYKALPAGG-KLIA 193 (254)
Q Consensus 157 -~D~v~~~~vlh--~~~~~~--~~~il~~~~~~L~pgG-~l~i 193 (254)
.|+|++-..=. ++.-++ ...+|.-+.+.|+||| .+++
T Consensus 139 ~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fvv 181 (269)
T 2px2_A 139 ISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCI 181 (269)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEE
Confidence 59999733221 111111 2236777779999999 7777
No 288
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.69 E-value=1.7e-05 Score=63.94 Aligned_cols=93 Identities=20% Similarity=0.247 Sum_probs=62.6
Q ss_pred CCCCeEEEecCcccHHHHHHHHH-------cCC-----CCeEEEeec-h---HHHhhC-----------C----------
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQK-------HRF-----ICEGINFDL-P---EVVAEA-----------P---------- 138 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~-------~~~-----~~~~~~~D~-~---~~~~~~-----------~---------- 138 (254)
.+..+|||||+|+|..+..+++. .|+ +. ++.++. | +.+..+ +
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~-~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLH-FISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEE-EEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeE-EEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 34679999999999999887765 564 45 788886 5 222211 0
Q ss_pred --------C--CCCcEEEeCCCCCC---CCC-----ccEEEecc-ccc----cCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 139 --------S--IPGVTHIGGDMFKS---IPA-----ADAIFMKW-VLT----TWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 139 --------~--~~~i~~~~~d~~~~---~p~-----~D~v~~~~-vlh----~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
. ..++++..+|+.+. .+. .|+|++-- .-. .|. .++|+.++++|+|||+|+.
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~----~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWT----QNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCC----HHHHHHHHHHEEEEEEEEE
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcC----HHHHHHHHHHcCCCcEEEE
Confidence 1 13467888998664 222 39988732 111 132 4789999999999999875
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.68 E-value=5.8e-05 Score=54.75 Aligned_cols=83 Identities=18% Similarity=0.123 Sum_probs=57.2
Q ss_pred CCCCeEEEecCccc-HHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCC----CccEEEeccccccC
Q 025363 96 KGVKRLVDVGGSAG-DCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIP----AADAIFMKWVLTTW 169 (254)
Q Consensus 96 ~~~~~vlDvG~G~G-~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p----~~D~v~~~~vlh~~ 169 (254)
.+..+|||||||+| ..+..|++. .+.. +++.|+ |..++ ++..|+|++.. .+|+|...+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~-~g~~-V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~DLIYsir----- 97 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH-SKVD-LVLTDIKPSHGG---------IVRDDITSPRMEIYRGAALIYSIR----- 97 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH-SCCE-EEEECSSCSSTT---------EECCCSSSCCHHHHTTEEEEEEES-----
T ss_pred CCCCcEEEEccCCChHHHHHHHHh-CCCe-EEEEECCccccc---------eEEccCCCCcccccCCcCEEEEcC-----
Confidence 44679999999999 588888764 2566 899997 55432 89999999843 359997654
Q ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 170 TDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 170 ~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
++.+....+-++++.. |.-++|.-.
T Consensus 98 PP~El~~~i~~lA~~v--~adliI~pL 122 (153)
T 2k4m_A 98 PPAEIHSSLMRVADAV--GARLIIKPL 122 (153)
T ss_dssp CCTTTHHHHHHHHHHH--TCEEEEECB
T ss_pred CCHHHHHHHHHHHHHc--CCCEEEEcC
Confidence 3445555556666654 556666433
No 290
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.57 E-value=0.00022 Score=55.14 Aligned_cols=88 Identities=6% Similarity=-0.072 Sum_probs=59.3
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC---------CCCcEEEeCCCCCC-------------
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS---------IPGVTHIGGDMFKS------------- 153 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~---------~~~i~~~~~d~~~~------------- 153 (254)
+..+|||||+| ..+..+++ .++.+ ++.+|. ++..+.+++ ..+|+++.+|..+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~-~~~g~-VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAE-LPGKH-VTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHT-STTCE-EEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEECch--HHHHHHHH-cCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 46799999984 56666665 44667 888887 766665543 24799999996542
Q ss_pred -----------CC--C-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 154 -----------IP--A-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 154 -----------~p--~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.+ . .|+|++-.-. ....+..+.+.|+|||.|++ |.
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k-------~~~~~~~~l~~l~~GG~Iv~-DN 154 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRF-------RVGCALATAFSITRPVTLLF-DD 154 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSS-------HHHHHHHHHHHCSSCEEEEE-TT
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCC-------chhHHHHHHHhcCCCeEEEE-eC
Confidence 12 2 3999985421 12556667799999999855 44
No 291
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.56 E-value=2e-05 Score=63.46 Aligned_cols=80 Identities=13% Similarity=0.152 Sum_probs=57.7
Q ss_pred HHHHHhhcCCCCCC--CeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHH-------HhhCCC-------C-CCcEEE
Q 025363 85 MTSVLEGYNGFKGV--KRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEV-------VAEAPS-------I-PGVTHI 146 (254)
Q Consensus 85 ~~~i~~~~~~~~~~--~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~-------~~~~~~-------~-~~i~~~ 146 (254)
.+.+.+... ..++ .+|||++||+|..+..++++ +.+ ++.+|. +.+ ++.++. . .+++++
T Consensus 75 ~e~l~~al~-l~~g~~~~VLDl~~G~G~dal~lA~~--g~~-V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 75 GEAVAKAVG-IKGDYLPDVVDATAGLGRDAFVLASV--GCR-VRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI 150 (258)
T ss_dssp GSHHHHHTT-CBTTBCCCEEETTCTTCHHHHHHHHH--TCC-EEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE
T ss_pred HHHHHHHhc-ccCCCCCEEEEcCCcCCHHHHHHHHc--CCE-EEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE
Confidence 445556663 5566 89999999999999999998 557 999999 643 333221 1 469999
Q ss_pred eCCCCCCC---CC-ccEEEecccccc
Q 025363 147 GGDMFKSI---PA-ADAIFMKWVLTT 168 (254)
Q Consensus 147 ~~d~~~~~---p~-~D~v~~~~vlh~ 168 (254)
.+|..+.+ ++ .|+|++.-.++.
T Consensus 151 ~~D~~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 151 HASSLTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp ESCHHHHSTTCSSCCSEEEECCCCCC
T ss_pred ECCHHHHHHhCcccCCEEEEcCCCCC
Confidence 99987642 33 399999766654
No 292
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.55 E-value=5.8e-05 Score=64.74 Aligned_cols=64 Identities=23% Similarity=0.345 Sum_probs=51.4
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--------CCcEEEeCCCCCCCC-----CccEEE
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--------PGVTHIGGDMFKSIP-----AADAIF 161 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--------~~i~~~~~d~~~~~p-----~~D~v~ 161 (254)
.++.+|||+|||+|..+..+++. ..+ ++++|. +.+++.++.+ .+++++.+|+.+.++ ..|+|+
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~--g~~-V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK--ASQ-GIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT--CSE-EEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHhc--CCE-EEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEE
Confidence 34789999999999999998877 356 999999 8888776543 469999999987522 249999
Q ss_pred e
Q 025363 162 M 162 (254)
Q Consensus 162 ~ 162 (254)
+
T Consensus 169 l 169 (410)
T 3ll7_A 169 V 169 (410)
T ss_dssp E
T ss_pred E
Confidence 8
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.46 E-value=0.00044 Score=55.95 Aligned_cols=107 Identities=16% Similarity=0.160 Sum_probs=69.7
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHH-Hhh---CCC--CCCcEEEeC-CCCCCCCC-
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEV-VAE---APS--IPGVTHIGG-DMFKSIPA- 156 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~-~~~---~~~--~~~i~~~~~-d~~~~~p~- 156 (254)
...+.+.+ .+.+..+|||+||++|.++...+....-.. +.++|+... .+. .+. .+-|.|..+ |++.-.|.
T Consensus 83 L~ei~~~~-~l~~~~~VlDLGaapGGwsq~~~~~~gv~~-V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~ 160 (321)
T 3lkz_A 83 LRWLVERR-FLEPVGKVIDLGCGRGGWCYYMATQKRVQE-VRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSEC 160 (321)
T ss_dssp HHHHHHTT-SCCCCEEEEEETCTTCHHHHHHTTCTTEEE-EEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCC
T ss_pred HHHHHHhc-CCCCCCEEEEeCCCCCcHHHHHHhhcCCCE-EEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCC
Confidence 45566666 478888999999999999998877765446 899997222 110 011 144888888 87655444
Q ss_pred ccEEEeccccccCC---HH-HHHHHHHHHHHhCCCC-CEEEE
Q 025363 157 ADAIFMKWVLTTWT---DD-ECKLIMENCYKALPAG-GKLIA 193 (254)
Q Consensus 157 ~D~v~~~~vlh~~~---~~-~~~~il~~~~~~L~pg-G~l~i 193 (254)
.|+|++--.=-.=+ ++ ...++|+-+.+.|++| |-+++
T Consensus 161 ~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 161 CDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 49988744311111 11 1234777778999988 87776
No 294
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.44 E-value=0.00023 Score=63.40 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=69.3
Q ss_pred CCCeEEEecCcccHHHHHHHHHcC---CCCeEEEeec-hHHHhhCCCC--------CCcEEEeCCCCCC-CC---C--cc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHR---FICEGINFDL-PEVVAEAPSI--------PGVTHIGGDMFKS-IP---A--AD 158 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~---~~~~~~~~D~-~~~~~~~~~~--------~~i~~~~~d~~~~-~p---~--~D 158 (254)
+..+|+|.+||+|.++..+++... ... +.++|+ +.+...++.+ .++.+..+|.+.. .| . .|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~-i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVV-YFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCce-EEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 567999999999999999988853 456 899998 7766655432 3578899999875 22 2 39
Q ss_pred EEEecccc-ccCCHH--------------------HHHHHHHHHHHhCC-CCCEEEEEc
Q 025363 159 AIFMKWVL-TTWTDD--------------------ECKLIMENCYKALP-AGGKLIACE 195 (254)
Q Consensus 159 ~v~~~~vl-h~~~~~--------------------~~~~il~~~~~~L~-pgG~l~i~d 195 (254)
+|+++=-+ ..|... .--.++.++.+.|+ |||++.++-
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 99974211 112100 01248999999999 999987754
No 295
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.44 E-value=0.00036 Score=56.84 Aligned_cols=94 Identities=18% Similarity=0.120 Sum_probs=66.5
Q ss_pred CCCeEEEecCcccHHHHHHHHHc-----CCCCeEEEeec-hHH--------------------------HhhCCC-----
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKH-----RFICEGINFDL-PEV--------------------------VAEAPS----- 139 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~-----~~~~~~~~~D~-~~~--------------------------~~~~~~----- 139 (254)
...+|||+|+..|..+..+++.. ++.+ ++.+|. +.+ .+.+++
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~k-I~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRT-VWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCC-EEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCE-EEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 46799999999999998887765 4667 888884 211 111111
Q ss_pred ---CCCcEEEeCCCCCCCCC----c-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 140 ---IPGVTHIGGDMFKSIPA----A-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 140 ---~~~i~~~~~d~~~~~p~----~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
.++|+++.||+.+.+|. . |+|++-.-. .+.....|+.+...|+|||.+++-|
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~----y~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL----YESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS----HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc----cccHHHHHHHHHhhcCCCEEEEEcC
Confidence 16899999999776442 2 788775422 1345688999999999999887744
No 296
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.40 E-value=0.00023 Score=60.03 Aligned_cols=113 Identities=16% Similarity=0.089 Sum_probs=77.3
Q ss_pred HhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC------------CCCcEEEeCCCCCC--
Q 025363 89 LEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS------------IPGVTHIGGDMFKS-- 153 (254)
Q Consensus 89 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~------------~~~i~~~~~d~~~~-- 153 (254)
+..++ ..++.+|||+.+|.|.=+..+++..++.. +++.|. +.-+...++ ..++.+...|....
T Consensus 141 ~~~L~-~~pg~~VLD~CAaPGGKT~~la~~~~~~~-l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~ 218 (359)
T 4fzv_A 141 VLALG-LQPGDIVLDLCAAPGGKTLALLQTGCCRN-LAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE 218 (359)
T ss_dssp HHHHC-CCTTEEEEESSCTTCHHHHHHHHTTCEEE-EEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH
T ss_pred HHHhC-CCCCCEEEEecCCccHHHHHHHHhcCCCc-EEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch
Confidence 34443 67889999999999999999998876666 888897 543332221 14678888887553
Q ss_pred -CCCc-cEEEe----cc-----------ccccCCHHHH-------HHHHHHHHHhCCCCCEEEEEccccCCCCC
Q 025363 154 -IPAA-DAIFM----KW-----------VLTTWTDDEC-------KLIMENCYKALPAGGKLIACEPVLPDDSN 203 (254)
Q Consensus 154 -~p~~-D~v~~----~~-----------vlh~~~~~~~-------~~il~~~~~~L~pgG~l~i~d~~~~~~~~ 203 (254)
.++. |.|++ +. +...|..++. .++|+++.+.|||||+|+.....+...++
T Consensus 219 ~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~EN 292 (359)
T 4fzv_A 219 LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQN 292 (359)
T ss_dssp HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTT
T ss_pred hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhC
Confidence 2333 88885 21 1223333332 36899999999999999988877765443
No 297
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.28 E-value=0.00032 Score=56.76 Aligned_cols=65 Identities=26% Similarity=0.296 Sum_probs=53.4
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--CCcEEEeCCCCC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFK 152 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--~~i~~~~~d~~~ 152 (254)
+.+.+++.+. ..++..+||.+||.|..+..++++ +.+ ++++|. |.+++.+++. +|+.++.+||.+
T Consensus 10 Ll~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~--~g~-VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~ 77 (285)
T 1wg8_A 10 LYQEALDLLA-VRPGGVYVDATLGGAGHARGILER--GGR-VIGLDQDPEAVARAKGLHLPGLTVVQGNFRH 77 (285)
T ss_dssp THHHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHTCCTTEEEEESCGGG
T ss_pred HHHHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHC--CCE-EEEEeCCHHHHHHHHhhccCCEEEEECCcch
Confidence 4677888884 788899999999999999999998 667 999999 8887655322 589999988854
No 298
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.27 E-value=0.00011 Score=76.20 Aligned_cols=141 Identities=16% Similarity=0.049 Sum_probs=65.2
Q ss_pred CCCCeEEEecCcccHHHHHHHHHcCC-----CCeEEEeec-hHHHhhCCCC---CCcEEEeCCCCCC---CCC-ccEEEe
Q 025363 96 KGVKRLVDVGGSAGDCLRMILQKHRF-----ICEGINFDL-PEVVAEAPSI---PGVTHIGGDMFKS---IPA-ADAIFM 162 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~~~l~~~~~~-----~~~~~~~D~-~~~~~~~~~~---~~i~~~~~d~~~~---~p~-~D~v~~ 162 (254)
.+..+|||||+|+|..+..+++.... .+ .+..|. +...+.+++. -.++....|..++ .+. +|+|++
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~-yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia 1317 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLD-YTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVC 1317 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEE-EEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccce-EEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEE
Confidence 45789999999999988877776542 13 566777 6666666654 1233322233222 122 499999
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCC
Q 025363 163 KWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAG 242 (254)
Q Consensus 163 ~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 242 (254)
.++||.- .+..+.|++++++|||||+|++.+........ . ...+++.. . .......+.++|.++|+++|
T Consensus 1318 ~~vl~~t--~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g-~----~~~~~~~~-~---r~~~~~~~~~~w~~~l~~~g 1386 (2512)
T 2vz8_A 1318 NCALATL--GDPAVAVGNMAATLKEGGFLLLHTLLAGHPLG-E----MVGFLTSP-E---QGGRHLLSQDQWESLFAGAS 1386 (2512)
T ss_dssp ECC----------------------CCEEEEEEC-----------------------------------CTTTTSSTTTT
T ss_pred ccccccc--ccHHHHHHHHHHhcCCCcEEEEEecccccccc-c----cccccccc-c---ccCCcccCHHHHHHHHHhCC
Confidence 9999953 44567899999999999999998754210000 0 00000000 0 00112246678888899999
Q ss_pred CCeeeE
Q 025363 243 FPHLRL 248 (254)
Q Consensus 243 f~~~~~ 248 (254)
|+.++.
T Consensus 1387 f~~~~~ 1392 (2512)
T 2vz8_A 1387 LHLVAL 1392 (2512)
T ss_dssp EEEEEE
T ss_pred Cceeee
Confidence 987654
No 299
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.24 E-value=0.00064 Score=56.23 Aligned_cols=95 Identities=12% Similarity=0.080 Sum_probs=73.2
Q ss_pred CCeEEEecCcccHHHHHHHHHcC-CCCeEEEeechHHHhhCCC---------CCCcEEEeCCCCCCCC----------Cc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHR-FICEGINFDLPEVVAEAPS---------IPGVTHIGGDMFKSIP----------AA 157 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~---------~~~i~~~~~d~~~~~p----------~~ 157 (254)
...||++|||--..+..+. .| +++ ++-+|.|.+++..++ ..+..++..|+.+.+. ..
T Consensus 103 ~~QvV~LGaGlDTra~Rl~--~~~~~~-v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLD--WPTGTT-VYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSA 179 (310)
T ss_dssp CCEEEEETCTTCCHHHHSC--CCTTCE-EEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTS
T ss_pred CCeEEEeCCCCCchhhhcc--CCCCcE-EEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCC
Confidence 4579999999988866654 24 356 888898988765432 2578899999986411 11
Q ss_pred -cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 158 -DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 158 -D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
=++++-.+|+.+++++...+++.+.+.+.||+.|++-.
T Consensus 180 Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp CEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred CEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 46778899999999999999999999999999877744
No 300
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.11 E-value=0.0029 Score=58.15 Aligned_cols=150 Identities=14% Similarity=0.100 Sum_probs=100.1
Q ss_pred CCCeEEEecCcccHHHHHHHHHcC--------CCCeEEEeechHHHhhCCCC----------------------------
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHR--------FICEGINFDLPEVVAEAPSI---------------------------- 140 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~--------~~~~~~~~D~~~~~~~~~~~---------------------------- 140 (254)
+...|+-+|||.-.....|...++ +++ ++-+|.|++++.-++.
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~-~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVS-FIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEE-EEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCE-EEECccHHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 467899999999999999988755 556 7778888776532110
Q ss_pred --CCcEEEeCCCCCC--C----------C-Cc-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCC
Q 025363 141 --PGVTHIGGDMFKS--I----------P-AA-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNE 204 (254)
Q Consensus 141 --~~i~~~~~d~~~~--~----------p-~~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~ 204 (254)
++..++..|+.+. + . .. -++++-.+|..++.+++.++|+.+.+ + |+|.+++.|...+..+..
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~~~~d 263 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPKGPFE 263 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTTCTTS
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCCCCCC
Confidence 3788999999873 1 1 12 46778889999999999999999986 4 688888888876643222
Q ss_pred hhhhhhcccchHhhhhccccC-ceecCHHHHHHHHHhCCCCeeeEEEc
Q 025363 205 SQRTRALLEGDIFVMTIYRAK-GNHRTEQEFKQLGFFAGFPHLRLYRV 251 (254)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~-~~~~t~~e~~~ll~~aGf~~~~~~~~ 251 (254)
+.. +.+. -.+......+.+ ....+.++..+.|+++||+.+....+
T Consensus 264 ~f~-~~m~-~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 264 PFS-KQML-AHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp HHH-HHHH-HHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred hHH-HHHH-HHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeH
Confidence 211 1110 011100000000 12247899999999999997766543
No 301
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.86 E-value=0.0022 Score=53.21 Aligned_cols=67 Identities=22% Similarity=0.269 Sum_probs=55.1
Q ss_pred hhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCCC--CCcEEEeCCCC
Q 025363 83 PFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-RFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMF 151 (254)
Q Consensus 83 ~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~~--~~i~~~~~d~~ 151 (254)
.+.+++++.+. ..++..+||..+|.|..+..++++. |+.+ ++++|. |.+++.++.. .|+.++.++|.
T Consensus 44 VLl~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~Gr-Vig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~ 114 (347)
T 3tka_A 44 VLLDEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGR-LLAIDRDPQAIAVAKTIDDPRFSIIHGPFS 114 (347)
T ss_dssp TTTHHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCE-EEEEESCHHHHHHHTTCCCTTEEEEESCGG
T ss_pred ccHHHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHhhcCCcEEEEeCCHH
Confidence 35778888884 7889999999999999999999985 6778 999999 8888877432 57777777764
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.62 E-value=0.0023 Score=53.72 Aligned_cols=67 Identities=6% Similarity=-0.008 Sum_probs=48.1
Q ss_pred hHHHHHhhcCCCC------CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCC---CCCCcEEEeCCCCC
Q 025363 84 FMTSVLEGYNGFK------GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAP---SIPGVTHIGGDMFK 152 (254)
Q Consensus 84 ~~~~i~~~~~~~~------~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~---~~~~i~~~~~d~~~ 152 (254)
+++.|++... .. ++..|||||.|.|.++..|+++....+ ++++++ +..++..+ ..++++++.+|+++
T Consensus 40 i~~~Iv~~~~-l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~-vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 40 VYNKIFDKLD-LTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQ-YSLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp HHHHHHHHHC-GGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSE-EEEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred HHHHHHHhcc-CCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCE-EEEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 4555666653 33 357899999999999999998754445 888887 54444332 24789999999965
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.54 E-value=0.0028 Score=51.27 Aligned_cols=92 Identities=15% Similarity=0.151 Sum_probs=59.1
Q ss_pred CCCCCeEEEecC------cccHHHHHHHHHcCC-CCeEEEeechHHHhhCCCCCCcEEEeCCCCCC-CCC-ccEEEecc-
Q 025363 95 FKGVKRLVDVGG------SAGDCLRMILQKHRF-ICEGINFDLPEVVAEAPSIPGVTHIGGDMFKS-IPA-ADAIFMKW- 164 (254)
Q Consensus 95 ~~~~~~vlDvG~------G~G~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~-~p~-~D~v~~~~- 164 (254)
.+.+.+|||+|+ ..|.+ .+.+..|. .. ++.+|+-++... .. .++.||+.+. ... .|+|+.-.
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~-VVavDL~~~~sd----a~-~~IqGD~~~~~~~~k~DLVISDMA 178 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTL-LVDSDLNDFVSD----AD-STLIGDCATVHTANKWDLIISDMY 178 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCE-EEEEESSCCBCS----SS-EEEESCGGGEEESSCEEEEEECCC
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcE-EEEeeCcccccC----CC-eEEEccccccccCCCCCEEEecCC
Confidence 456899999996 66773 23334665 57 899998444322 12 4588997654 223 39988621
Q ss_pred --ccccC------CHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 165 --VLTTW------TDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 165 --vlh~~------~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
.--+. +..-++.++.=+.+.|+|||.+++-
T Consensus 179 PNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 179 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp CTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 11111 1124678888899999999999884
No 304
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.84 E-value=0.041 Score=48.86 Aligned_cols=110 Identities=9% Similarity=-0.006 Sum_probs=69.4
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcC-------------CCCeEEEeec-hHHHhhCCCC------CCc
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHR-------------FICEGINFDL-PEVVAEAPSI------PGV 143 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~-------------~~~~~~~~D~-~~~~~~~~~~------~~i 143 (254)
+++-+++.++ ..++.+|+|-+||+|.++....+... ... ..++|+ +.+...++-+ ..-
T Consensus 205 Vv~lmv~l~~-p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~-i~G~E~~~~~~~la~mNl~lhg~~~~ 282 (530)
T 3ufb_A 205 VVRFMVEVMD-PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESS-IFGGEAKSLPYLLVQMNLLLHGLEYP 282 (530)
T ss_dssp HHHHHHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCC-EEEECCSHHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHhhc-cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhh-hhhhhccHHHHHHHHHHHHhcCCccc
Confidence 4455666664 55677999999999999988765421 235 788888 6655544421 334
Q ss_pred EEEeCCCCCC-C----C--CccEEEecccccc-CCH-------------HHHHHHHHHHHHhCC-------CCCEEEEEc
Q 025363 144 THIGGDMFKS-I----P--AADAIFMKWVLTT-WTD-------------DECKLIMENCYKALP-------AGGKLIACE 195 (254)
Q Consensus 144 ~~~~~d~~~~-~----p--~~D~v~~~~vlh~-~~~-------------~~~~~il~~~~~~L~-------pgG~l~i~d 195 (254)
.+..+|.+.. . + ..|+|+.+=-+-. +.. +.....+..+.+.|| |||++.++-
T Consensus 283 ~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 283 RIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp EEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred cccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 5667787653 1 1 1399998544421 111 112356788888886 699888764
No 305
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.73 E-value=0.0092 Score=48.87 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=39.7
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS 139 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~ 139 (254)
+++.+++.+. .++..|||++||+|.++..+++. +.+ ++++|+ +.+++.+++
T Consensus 224 l~~~~i~~~~--~~~~~vlD~f~GsGt~~~~a~~~--g~~-~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 224 LAERLVRMFS--FVGDVVLDPFAGTGTTLIAAARW--GRR-ALGVELVPRYAQLAKE 275 (297)
T ss_dssp HHHHHHHHHC--CTTCEEEETTCTTTHHHHHHHHT--TCE-EEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCe-EEEEeCCHHHHHHHHH
Confidence 4556666652 56789999999999999998876 346 999999 888777654
No 306
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.11 E-value=0.033 Score=45.63 Aligned_cols=92 Identities=25% Similarity=0.293 Sum_probs=53.3
Q ss_pred CCCeEEEecCcccHHHHHH----HHHcCCCC-eEEEeechHHHhhC------------------CC--CCC--cEEEeCC
Q 025363 97 GVKRLVDVGGSAGDCLRMI----LQKHRFIC-EGINFDLPEVVAEA------------------PS--IPG--VTHIGGD 149 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l----~~~~~~~~-~~~~~D~~~~~~~~------------------~~--~~~--i~~~~~d 149 (254)
+.-+|+|+|=|+|...... .+..|+.+ ..+.++.. .+... .. ..+ +++.-||
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~-pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKE-LLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESS-CCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHH-HHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 3568999999999865433 34466655 13444421 01000 00 033 3466788
Q ss_pred CCCCC---CC--ccEEEecccc-----ccCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 150 MFKSI---PA--ADAIFMKWVL-----TTWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 150 ~~~~~---p~--~D~v~~~~vl-----h~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
+.+.+ +. .|++++--.- ..|+ ..++++++++++|||.|+-
T Consensus 175 a~~~l~~l~~~~~Da~flDgFsP~kNPeLWs----~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 175 ARKRIKEVENFKADAVFHDAFSPYKNPELWT----LDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HHHHGGGCCSCCEEEEEECCSCTTTSGGGGS----HHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhhhcccceeEEEeCCCCcccCcccCC----HHHHHHHHHHhCCCcEEEE
Confidence 76543 32 3888873211 1243 4789999999999998753
No 307
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=92.98 E-value=0.089 Score=38.30 Aligned_cols=96 Identities=17% Similarity=0.182 Sum_probs=61.3
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCCCeEEEeechH-HHhhCCCCCCcEEEeCCCCCCCCC------cc--EEEecccccc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPE-VVAEAPSIPGVTHIGGDMFKSIPA------AD--AIFMKWVLTT 168 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~d~~~~~p~------~D--~v~~~~vlh~ 168 (254)
..-|||+|=|+|..=..+.+.+|+-. +.++|..- .-.... -+.=.++.||+.+.+|. .. ++..-.-.|+
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~-I~vfDR~~~~hp~~~-P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD~G~g~ 118 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGRE-IYVFERAVASHPDST-PPEAQLILGDIRETLPATLERFGATASLVHADLGGHN 118 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSC-EEEEESSCCCCGGGC-CCGGGEEESCHHHHHHHHHHHHCSCEEEEEECCCCSC
T ss_pred CCceEEecCCCChhHHHHHHhCCCCc-EEEEEeeeccCCCCC-CchHheecccHHHHHHHHHHhcCCceEEEEeecCCCC
Confidence 46799999999999999999999999 99999521 111111 13345778888766432 13 3333333343
Q ss_pred CCHHHHH----HHHHHHHHhCCCCCEEEEEccc
Q 025363 169 WTDDECK----LIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 169 ~~~~~~~----~il~~~~~~L~pgG~l~i~d~~ 197 (254)
.++.. .+-.-+..+|.|||.++.....
T Consensus 119 --~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 119 --REKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp --HHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred --cchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 22222 3334456678899998886665
No 308
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=92.89 E-value=0.079 Score=42.29 Aligned_cols=94 Identities=18% Similarity=0.236 Sum_probs=63.9
Q ss_pred CCeEEEecCcccHHHHHHHHH-------cCCCCeEEEeec----hHH------------------------Hhh------
Q 025363 98 VKRLVDVGGSAGDCLRMILQK-------HRFICEGINFDL----PEV------------------------VAE------ 136 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~-------~~~~~~~~~~D~----~~~------------------------~~~------ 136 (254)
...|+|+|+-.|..+..+++. .++-+ +.++|. |+. +..
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~-v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRR-IVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCC-EEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCE-EEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 568999999999988886542 34556 999992 211 000
Q ss_pred -CCC----CCCcEEEeCCCCCCCC-------C--ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 137 -APS----IPGVTHIGGDMFKSIP-------A--ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 137 -~~~----~~~i~~~~~d~~~~~p-------~--~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.+. .++|+++.|++.+.+| . .|++++-.=. .+.....++.+...|+|||.+++-|.
T Consensus 149 ~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~----Y~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 149 CSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL----YEPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp TTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC----HHHHHHHHHHHGGGEEEEEEEEESST
T ss_pred hhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc----cchHHHHHHHHHHHhCCCcEEEEcCC
Confidence 001 1679999999977643 2 2777764421 24456789999999999999988664
No 309
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.06 E-value=0.61 Score=38.29 Aligned_cols=89 Identities=12% Similarity=0.097 Sum_probs=53.9
Q ss_pred CCeEEEecCcc--cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCC-CCCCccEEEeccccccCCHHH
Q 025363 98 VKRLVDVGGSA--GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK-SIPAADAIFMKWVLTTWTDDE 173 (254)
Q Consensus 98 ~~~vlDvG~G~--G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~-~~p~~D~v~~~~vlh~~~~~~ 173 (254)
..+|.=||+|. +.++..+.+.....+ ++++|. ++.++.+.+..-+.-...|..+ ...++|+|++.- +...
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~-V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilav-----p~~~ 106 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGK-IYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS-----PVRT 106 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSE-EEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECS-----CGGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeC-----CHHH
Confidence 36888898773 334444555433226 899998 6666655443222222334433 344469988753 3345
Q ss_pred HHHHHHHHHHhCCCCCEEE
Q 025363 174 CKLIMENCYKALPAGGKLI 192 (254)
Q Consensus 174 ~~~il~~~~~~L~pgG~l~ 192 (254)
..++++++...++||..++
T Consensus 107 ~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 107 FREIAKKLSYILSEDATVT 125 (314)
T ss_dssp HHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHhhccCCCcEEE
Confidence 5678899999999987544
No 310
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=91.39 E-value=0.27 Score=39.22 Aligned_cols=50 Identities=14% Similarity=0.062 Sum_probs=38.6
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAP 138 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~ 138 (254)
+++.+++.+ -.++..|||..||+|..+.+..+. +-+ ++++|+ +..++.++
T Consensus 201 l~~~~i~~~--~~~~~~vlD~f~GsGtt~~~a~~~--gr~-~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 201 LIERIIRAS--SNPNDLVLDCFMGSGTTAIVAKKL--GRN-FIGCDMNAEYVNQAN 251 (260)
T ss_dssp HHHHHHHHH--CCTTCEEEESSCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHH
T ss_pred HHHHHHHHh--CCCCCEEEECCCCCCHHHHHHHHc--CCe-EEEEeCCHHHHHHHH
Confidence 466667666 256789999999999999998876 445 999999 77666554
No 311
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=91.00 E-value=0.4 Score=40.64 Aligned_cols=61 Identities=15% Similarity=0.190 Sum_probs=38.8
Q ss_pred CchHHHHHHHHHhcCCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHc-------CCCCeEEEeechH
Q 025363 66 IPEMNGLMRKAMSGVSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKH-------RFICEGINFDLPE 132 (254)
Q Consensus 66 ~~~~~~~~~~~m~~~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------~~~~~~~~~D~~~ 132 (254)
.|+....|.+.+..+ +....+.. ..+...+|+|+|+|+|.++..+++.. ..++ ++.++...
T Consensus 54 apeis~~FGe~la~~----~~~~w~~~-g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~-y~iVE~Sp 121 (387)
T 1zkd_A 54 SPEISQMFGELLGLW----SASVWKAA-DEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLS-VHLVEINP 121 (387)
T ss_dssp HHHHCHHHHHHHHHH----HHHHHHHT-TCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEE-EEEECCCH
T ss_pred CCchHHHHHHHHHHH----HHHHHHHc-CCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccE-EEEEecCH
Confidence 366666666655542 22222333 23445689999999999999998763 2335 78888833
No 312
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=89.30 E-value=0.54 Score=40.17 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=34.2
Q ss_pred CCCCCeEEEecCcccHHHHHHH-HHcCC-CCeEEEeec-hHHHhhCC
Q 025363 95 FKGVKRLVDVGGSAGDCLRMIL-QKHRF-ICEGINFDL-PEVVAEAP 138 (254)
Q Consensus 95 ~~~~~~vlDvG~G~G~~~~~l~-~~~~~-~~~~~~~D~-~~~~~~~~ 138 (254)
.+++..++|||++.|.++..++ +..+. .+ ++.++. |...+..+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~-V~afEP~p~~~~~L~ 269 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFER-VWMIEPDRINLQTLQ 269 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSE-EEEECCCHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCE-EEEEcCCHHHHHHHH
Confidence 3678899999999999999988 56665 57 999998 76655443
No 313
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=89.23 E-value=2.2 Score=35.38 Aligned_cols=94 Identities=12% Similarity=0.085 Sum_probs=58.3
Q ss_pred CCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCC------CCCCC----CC-ccEE
Q 025363 94 GFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGD------MFKSI----PA-ADAI 160 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d------~~~~~----p~-~D~v 160 (254)
...++.+||-+|+|. |.++..+++.....+ +++.|. ++-.+.+++..--.++..+ +.+.+ +. .|+|
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~-Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~v 246 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQ-VVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVT 246 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSE-EEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEE
Confidence 367788999999875 889999998864326 888886 6555554433111222211 11111 12 3887
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 161 FMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 161 ~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+-.-. . ...++...++|+|||++++.-.
T Consensus 247 id~~g-----~---~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 247 IECTG-----A---EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp EECSC-----C---HHHHHHHHHHSCTTCEEEECSC
T ss_pred EECCC-----C---hHHHHHHHHHhcCCCEEEEEec
Confidence 74321 1 2457788899999999998654
No 314
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=88.66 E-value=0.66 Score=37.41 Aligned_cols=97 Identities=15% Similarity=-0.006 Sum_probs=67.5
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCCC----CCC---ccEEEeccc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS----IPA---ADAIFMKWV 165 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~~----~p~---~D~v~~~~v 165 (254)
...+||+=+|||.++.+.++. .-+ ++.+|. +...+..+++ .+++++..|.++. .|. .|+|++-=-
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~--~d~-~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP 168 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS--QDR-LYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS 168 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT--TSE-EEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC
T ss_pred CCCceeEeCCcHHHHHHHcCC--CCe-EEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCC
Confidence 557899999999999999984 445 899998 7776666654 6799999997663 132 399998444
Q ss_pred cccCCHHHHHHHHHHHHHh--CCCCCEEEEEccccC
Q 025363 166 LTTWTDDECKLIMENCYKA--LPAGGKLIACEPVLP 199 (254)
Q Consensus 166 lh~~~~~~~~~il~~~~~~--L~pgG~l~i~d~~~~ 199 (254)
...- .+..++++.+.+. +.|+|.+++-=++..
T Consensus 169 Ye~k--~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 169 YERK--EEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp CCST--THHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred CCCC--cHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 4321 2445666666653 458888888655443
No 315
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=88.62 E-value=1.1 Score=37.42 Aligned_cols=95 Identities=15% Similarity=0.072 Sum_probs=59.2
Q ss_pred CCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC---CCCCC----CCCc-cEEEec
Q 025363 94 GFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG---DMFKS----IPAA-DAIFMK 163 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~---d~~~~----~p~~-D~v~~~ 163 (254)
...++.+||-+|+|. |..+..+++.....+ ++++|. ++-.+.+++..--.++.. |+.+. .+.. |+|+-.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~-Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~ 265 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASI-IIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALES 265 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSE-EEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCe-EEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEEC
Confidence 467789999999876 889999998864335 788886 655555443211112221 11111 1113 877643
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 164 WVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
-. . ...++.+.++|+|||++++.-..
T Consensus 266 ~g-----~---~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 266 TG-----S---PEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp SC-----C---HHHHHHHHHTEEEEEEEEECCCC
T ss_pred CC-----C---HHHHHHHHHHHhcCCEEEEeCCC
Confidence 22 1 24678899999999999887543
No 316
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.40 E-value=2.5 Score=33.78 Aligned_cols=88 Identities=13% Similarity=-0.034 Sum_probs=51.1
Q ss_pred CeEEEecCcc--cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHHHH
Q 025363 99 KRLVDVGGSA--GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECK 175 (254)
Q Consensus 99 ~~vlDvG~G~--G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~~ 175 (254)
.+|.=||+|. +.++..+.+..++.+ ++++|. ++..+.+.+...+.....|..+....+|+|++.- ++....
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~-V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilav-----p~~~~~ 80 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYK-IVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAV-----PIKKTI 80 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSE-EEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECS-----CHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcE-EEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcC-----CHHHHH
Confidence 5788888874 334444555544556 888998 6555443322211112233322234459988743 445557
Q ss_pred HHHHHHHHh-CCCCCEEE
Q 025363 176 LIMENCYKA-LPAGGKLI 192 (254)
Q Consensus 176 ~il~~~~~~-L~pgG~l~ 192 (254)
.+++++... ++|+..++
T Consensus 81 ~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 81 DFIKILADLDLKEDVIIT 98 (290)
T ss_dssp HHHHHHHTSCCCTTCEEE
T ss_pred HHHHHHHhcCCCCCCEEE
Confidence 888888888 88876544
No 317
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=88.07 E-value=2.2 Score=35.98 Aligned_cols=95 Identities=13% Similarity=0.092 Sum_probs=59.6
Q ss_pred CeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCC----C-------CCccEEEeccc
Q 025363 99 KRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS----I-------PAADAIFMKWV 165 (254)
Q Consensus 99 ~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~----~-------p~~D~v~~~~v 165 (254)
.+++|+-||.|.++..+.++. .+.+.++|. +...+..+.+ +...++.+|+.+. + +..|+++..--
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 589999999999999999884 442457888 6655544433 5677888888654 1 12388887554
Q ss_pred cccCC--------HHHHHHHHH---HHHHhCCCCCEEEEEcccc
Q 025363 166 LTTWT--------DDECKLIME---NCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 166 lh~~~--------~~~~~~il~---~~~~~L~pgG~l~i~d~~~ 198 (254)
-..|+ |+. ..++. ++.+.++| +++++|.+.
T Consensus 81 CQ~fS~ag~~~~~d~r-~~L~~~~~~~v~~~~P--~~~v~ENV~ 121 (376)
T 3g7u_A 81 CQGFSSIGKGNPDDSR-NQLYMHFYRLVSELQP--LFFLAENVP 121 (376)
T ss_dssp CCTTC-------CHHH-HHHHHHHHHHHHHHCC--SEEEEEECT
T ss_pred CCCcccccCCCCCCch-HHHHHHHHHHHHHhCC--CEEEEecch
Confidence 33333 222 22333 33344567 567777654
No 318
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=87.19 E-value=1.1 Score=33.57 Aligned_cols=91 Identities=11% Similarity=-0.025 Sum_probs=56.3
Q ss_pred CCCCCCeEEEec--CcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC---------CC-Cc-cE
Q 025363 94 GFKGVKRLVDVG--GSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS---------IP-AA-DA 159 (254)
Q Consensus 94 ~~~~~~~vlDvG--~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~---------~p-~~-D~ 159 (254)
...++.+||.+| +|.|..+..+++.. +.+ +++.|. ++..+.+++...-... |..+. .. .. |+
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~-V~~~~~~~~~~~~~~~~g~~~~~--d~~~~~~~~~~~~~~~~~~~D~ 110 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMI-GAR-IYTTAGSDAKREMLSRLGVEYVG--DSRSVDFADEILELTDGYGVDV 110 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHH-TCE-EEEEESSHHHHHHHHTTCCSEEE--ETTCSTHHHHHHHHTTTCCEEE
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHHcCCCEEe--eCCcHHHHHHHHHHhCCCCCeE
Confidence 367788999999 46788888877765 457 888887 5555444332111111 22111 11 12 77
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 160 IFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 160 v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
++..- .. ..++.+.+.|+|||++++.-..
T Consensus 111 vi~~~-----g~----~~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 111 VLNSL-----AG----EAIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp EEECC-----CT----HHHHHHHHTEEEEEEEEECSCG
T ss_pred EEECC-----ch----HHHHHHHHHhccCCEEEEEcCC
Confidence 77432 11 3578889999999999986543
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=86.61 E-value=1.7 Score=36.77 Aligned_cols=105 Identities=16% Similarity=0.084 Sum_probs=63.5
Q ss_pred hhcCCCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC---CC-CCCC----CC--c
Q 025363 90 EGYNGFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG---DM-FKSI----PA--A 157 (254)
Q Consensus 90 ~~~~~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~---d~-~~~~----p~--~ 157 (254)
+.. ...++.+||-+|+|. |.++..+++.....+ ++++|. ++-++.+++.. ..++.. |+ .+.+ +. .
T Consensus 179 ~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~-Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~~~~~~~g~g~ 255 (398)
T 2dph_A 179 VSA-GVKPGSHVYIAGAGPVGRCAAAGARLLGAAC-VIVGDQNPERLKLLSDAG-FETIDLRNSAPLRDQIDQILGKPEV 255 (398)
T ss_dssp HHT-TCCTTCEEEEECCSHHHHHHHHHHHHHTCSE-EEEEESCHHHHHHHHTTT-CEEEETTSSSCHHHHHHHHHSSSCE
T ss_pred HHc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEEcCCHHHHHHHHHcC-CcEEcCCCcchHHHHHHHHhCCCCC
Confidence 444 477889999999876 889999998864336 899986 66666665542 233322 11 1111 12 3
Q ss_pred cEEEeccccccC-C-H----HHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 158 DAIFMKWVLTTW-T-D----DECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 158 D~v~~~~vlh~~-~-~----~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
|+|+-.-.-... . + ......++.+.++|+|||++++.-..
T Consensus 256 Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp EEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred CEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence 888753321100 0 0 00113578889999999999876543
No 320
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=86.43 E-value=1.2 Score=36.81 Aligned_cols=93 Identities=11% Similarity=0.049 Sum_probs=59.0
Q ss_pred CCCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC---CCCCCC----CCccEEEecc
Q 025363 94 GFKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG---DMFKSI----PAADAIFMKW 164 (254)
Q Consensus 94 ~~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~---d~~~~~----p~~D~v~~~~ 164 (254)
...++.+||-+|+| .|..+..+++.. +.+ +++.|. ++-.+.+++..--..+.. |+.+.+ +..|+++-..
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~-Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~ 240 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAM-GLR-VAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTA 240 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHT-TCE-EEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCe-EEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeC
Confidence 46788899999976 499999999987 457 999987 666555544321112211 111101 1237766432
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 165 VLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 165 vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
. . ...++.+.++|+|+|++++.-.
T Consensus 241 g----~----~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 241 V----S----PKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp C----C----HHHHHHHHHHEEEEEEEEECSC
T ss_pred C----C----HHHHHHHHHHhccCCEEEEeCC
Confidence 1 1 2567888999999999988654
No 321
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=86.13 E-value=1.9 Score=36.08 Aligned_cols=96 Identities=15% Similarity=0.137 Sum_probs=58.8
Q ss_pred CCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEE---eCCCCC-------CCCCc-cEE
Q 025363 94 GFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHI---GGDMFK-------SIPAA-DAI 160 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~---~~d~~~-------~~p~~-D~v 160 (254)
...++.+||-+|+|. |.++..+++.....+ +++.|. ++-.+.+++..--..+ ..|+.+ ..+.. |+|
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~-Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvv 257 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATT-VILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVV 257 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEE
Confidence 467788999998764 888899998864336 888887 5555444432111111 111111 11123 887
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 161 FMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 161 ~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
+-.-. . ...++.+.++|+|||++++.-...
T Consensus 258 id~~G-----~---~~~~~~~~~~l~~~G~vv~~G~~~ 287 (370)
T 4ej6_A 258 IECAG-----V---AETVKQSTRLAKAGGTVVILGVLP 287 (370)
T ss_dssp EECSC-----C---HHHHHHHHHHEEEEEEEEECSCCC
T ss_pred EECCC-----C---HHHHHHHHHHhccCCEEEEEeccC
Confidence 75321 1 246788899999999999876543
No 322
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=85.99 E-value=4.6 Score=32.61 Aligned_cols=79 Identities=13% Similarity=0.147 Sum_probs=48.6
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCC----CeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCH
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFI----CEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTD 171 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~----~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~ 171 (254)
++..|+=||||.|.....|.+.+|+. + -+++|. |.. ......+ ++.+....+ +
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ik-WvLiDPap~~-~~l~~~~----------------NV~li~~fv----d 117 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIK-WMLIDGRHHD-PILNGLR----------------DVTLVTRFV----D 117 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCE-EEEEESSCCC-GGGTTCT----------------TEEEEECCC----C
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeE-EEEEcCCcch-hhhcCCC----------------cEEEEeccC----C
Confidence 45699999999999999999998864 4 566663 110 0011112 444443332 2
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEccccCC
Q 025363 172 DECKLIMENCYKALPAGGKLIACEPVLPD 200 (254)
Q Consensus 172 ~~~~~il~~~~~~L~pgG~l~i~d~~~~~ 200 (254)
+. -+++.++.+.....|+|.|.....
T Consensus 118 e~---dl~~l~~~~~~~~iLLISDIRS~r 143 (307)
T 3mag_A 118 EE---YLRSIKKQLHPSKIILISDVRSKR 143 (307)
T ss_dssp HH---HHHHHHHHHTTSCEEEEECCCC--
T ss_pred HH---HHHHHHHhccCCCEEEEEEecCCC
Confidence 32 245666666777899998886653
No 323
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=85.81 E-value=1.2 Score=36.81 Aligned_cols=91 Identities=14% Similarity=-0.026 Sum_probs=58.0
Q ss_pred CCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCc-cEEEeccccccCC
Q 025363 94 GFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAA-DAIFMKWVLTTWT 170 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~-D~v~~~~vlh~~~ 170 (254)
...++.+||-+|+|. |.++..+++.. +.+ +++.+. ++-.+.+++..--.++ .|. +.+... |+|+-.-.-.
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~-Vi~~~~~~~~~~~~~~lGa~~v~-~~~-~~~~~~~D~vid~~g~~--- 245 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM-GAE-VSVFARNEHKKQDALSMGVKHFY-TDP-KQCKEELDFIISTIPTH--- 245 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT-TCE-EEEECSSSTTHHHHHHTTCSEEE-SSG-GGCCSCEEEEEECCCSC---
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC-CCe-EEEEeCCHHHHHHHHhcCCCeec-CCH-HHHhcCCCEEEECCCcH---
Confidence 367888999999865 88899999876 457 888886 5544444433211222 221 122223 8887432211
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 171 DDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 171 ~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
..++.+.+.|+|+|++++.-.
T Consensus 246 -----~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 246 -----YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp -----CCHHHHHTTEEEEEEEEECCC
T ss_pred -----HHHHHHHHHHhcCCEEEEECC
Confidence 246788899999999998754
No 324
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.61 E-value=3.8 Score=32.59 Aligned_cols=88 Identities=13% Similarity=0.098 Sum_probs=49.1
Q ss_pred eEEEecCcc-cHH-HHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCC-CccEEEeccccccCCHHHHH
Q 025363 100 RLVDVGGSA-GDC-LRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIP-AADAIFMKWVLTTWTDDECK 175 (254)
Q Consensus 100 ~vlDvG~G~-G~~-~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p-~~D~v~~~~vlh~~~~~~~~ 175 (254)
+|.=||+|. |.. +..+.+.....+ ++++|. ++..+.+++..-......|..+... .+|+|++. .+.....
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~-V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVila-----vp~~~~~ 76 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGK-IYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS-----SPVRTFR 76 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSE-EEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC-----SCHHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcE-EEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEc-----CCHHHHH
Confidence 577788763 332 333333321226 888998 6555544332211111223322244 56998874 3455667
Q ss_pred HHHHHHHHhCCCCCEEEE
Q 025363 176 LIMENCYKALPAGGKLIA 193 (254)
Q Consensus 176 ~il~~~~~~L~pgG~l~i 193 (254)
.+++++...++|+..++.
T Consensus 77 ~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 77 EIAKKLSYILSEDATVTD 94 (281)
T ss_dssp HHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHhhCCCCcEEEE
Confidence 888899899998875544
No 325
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=85.22 E-value=2.9 Score=34.83 Aligned_cols=90 Identities=14% Similarity=0.137 Sum_probs=57.0
Q ss_pred CCCeEEEec--CcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC--CCCCC---C-CCc-cEEEecccc
Q 025363 97 GVKRLVDVG--GSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG--DMFKS---I-PAA-DAIFMKWVL 166 (254)
Q Consensus 97 ~~~~vlDvG--~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~--d~~~~---~-p~~-D~v~~~~vl 166 (254)
++.+||=+| |+.|.++..+++...+.+ +++.+. ++-.+.+++..--.++.. |+.+. . +.. |+|+-.-
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~-Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~-- 247 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLT-VIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTT-- 247 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSE-EEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECS--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCE-EEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECC--
Confidence 678899988 567999999999866778 999988 655555443321111111 11111 1 123 7776422
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 167 TTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 167 h~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
. ....++.+.++|+|+|++++..
T Consensus 248 ---g---~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 248 ---H---TDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp ---C---HHHHHHHHHHHSCTTCEEEECS
T ss_pred ---C---chhhHHHHHHHhcCCCEEEEEC
Confidence 1 1256788999999999999874
No 326
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.11 E-value=7.1 Score=28.61 Aligned_cols=90 Identities=13% Similarity=0.134 Sum_probs=50.4
Q ss_pred CCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC--------CCCccEEEeccccc
Q 025363 98 VKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--------IPAADAIFMKWVLT 167 (254)
Q Consensus 98 ~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~--------~p~~D~v~~~~vlh 167 (254)
+.+|+=+|+|. |......+.+..+.+ ++++|. ++..+.++. ..+.++.+|..+. ...+|+|+..--
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~-V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~-- 114 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKI-SLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMP-- 114 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSC-EEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS--
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCe-EEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC--
Confidence 45788888752 333333333321456 889998 665555443 3466677777542 123488776321
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
+++....++. ..+.+.|+++++..
T Consensus 115 --~~~~~~~~~~-~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 115 --HHQGNQTALE-QLQRRNYKGQIAAI 138 (183)
T ss_dssp --SHHHHHHHHH-HHHHTTCCSEEEEE
T ss_pred --ChHHHHHHHH-HHHHHCCCCEEEEE
Confidence 2344444444 45556778877763
No 327
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=85.01 E-value=7 Score=32.17 Aligned_cols=93 Identities=11% Similarity=0.009 Sum_probs=57.7
Q ss_pred CCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEe----CCCCCCC----C----C-cc
Q 025363 94 GFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIG----GDMFKSI----P----A-AD 158 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~----~d~~~~~----p----~-~D 158 (254)
...++.+||-+|+|. |..+..+++.. +.+ +++.|. ++-.+.+++..--..+. .|+.+.+ + . .|
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~-Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAY-GAF-VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCE-EEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCE-EEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCC
Confidence 367788999999764 88888888876 567 888886 65555544331111221 1111111 1 2 38
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+|+-.-. . ...++...++|+|+|++++.-.
T Consensus 243 ~vid~~g-----~---~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 243 VTIDCSG-----N---EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp EEEECSC-----C---HHHHHHHHHHSCTTCEEEECSC
T ss_pred EEEECCC-----C---HHHHHHHHHHHhcCCEEEEEec
Confidence 8774321 1 2357788899999999998754
No 328
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=84.75 E-value=3.8 Score=34.21 Aligned_cols=99 Identities=10% Similarity=0.005 Sum_probs=62.2
Q ss_pred HhhcCCCCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC-----CCCCC----CCC-
Q 025363 89 LEGYNGFKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG-----DMFKS----IPA- 156 (254)
Q Consensus 89 ~~~~~~~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~-----d~~~~----~p~- 156 (254)
.+.. ..+++.+||=+|+| .|.++..+++.....+ ++++|. ++-++.+++..--.++.. |+.+. .+.
T Consensus 186 ~~~~-~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~-Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 186 WNTA-KVEPGSNVAIFGLGTVGLAVAEGAKTAGASR-IIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp HTTT-CCCTTCCEEEECCSHHHHHHHHHHHHHTCSC-EEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSC
T ss_pred Hhhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCe-EEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCC
Confidence 3444 47788899999976 5888999998874447 899986 666666655422122211 11110 112
Q ss_pred ccEEEeccccccCCHHHHHHHHHHHHHhCCCC-CEEEEEccc
Q 025363 157 ADAIFMKWVLTTWTDDECKLIMENCYKALPAG-GKLIACEPV 197 (254)
Q Consensus 157 ~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pg-G~l~i~d~~ 197 (254)
.|+|+-.-. . ...++.+.++|+|| |++++.-..
T Consensus 264 ~D~vid~~g-----~---~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 264 VDYSFECIG-----N---VSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp BSEEEECSC-----C---HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCEEEECCC-----C---HHHHHHHHHHhhccCCEEEEEccc
Confidence 388775321 1 24678899999997 999987653
No 329
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=83.86 E-value=1.6 Score=36.20 Aligned_cols=72 Identities=10% Similarity=-0.003 Sum_probs=47.2
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCCC----C--CccEEEeccccccC
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKSI----P--AADAIFMKWVLTTW 169 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~~----p--~~D~v~~~~vlh~~ 169 (254)
..+++|+-||.|.++..+.++.-..+.+..+|. +..++..+.+ +...++.+|+.+.. + ..|+++..---..+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 358999999999999999988422232677788 6666555443 45567788886642 2 24998886543333
No 330
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=83.73 E-value=9.7 Score=27.08 Aligned_cols=91 Identities=16% Similarity=0.080 Sum_probs=51.5
Q ss_pred CCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-------CCCccEEEecccc
Q 025363 96 KGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-------IPAADAIFMKWVL 166 (254)
Q Consensus 96 ~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-------~p~~D~v~~~~vl 166 (254)
.+..+|+=+|+|. |......+... +.+ ++++|. ++..+.++....+.++.+|..+. ...+|+|+..--
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~-g~~-V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~- 93 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS-GHS-VVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN- 93 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCE-EEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS-
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC-CCe-EEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC-
Confidence 3467899998753 44444444443 456 889998 77666665223466677776442 122488776432
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 167 TTWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 167 h~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
+......+..+.+.+.|..+++.
T Consensus 94 ----~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 94 ----DDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp ----CHHHHHHHHHHHHHTSCCSEEEE
T ss_pred ----CcHHHHHHHHHHHHHCCCCeEEE
Confidence 23333444445555566666555
No 331
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=83.43 E-value=1.4 Score=36.43 Aligned_cols=94 Identities=15% Similarity=0.105 Sum_probs=60.5
Q ss_pred CCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCC--CCCCC----CC-c-cEEEecc
Q 025363 95 FKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGD--MFKSI----PA-A-DAIFMKW 164 (254)
Q Consensus 95 ~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d--~~~~~----p~-~-D~v~~~~ 164 (254)
..++.+||-+|+|. |.++..+++.....+ ++++|. ++-.+.+++..--.++..+ +.+.+ +. . |+|+-.-
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~-Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~ 247 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAAR-VIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFV 247 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCE-EEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECC
Confidence 56788999998764 889999999876677 999987 6655555543211222211 11111 11 2 7777422
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 165 VLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 165 vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
. . ...++.+.++|+|+|++++.-..
T Consensus 248 G-----~---~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 248 G-----A---QSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp C-----C---HHHHHHHHHHEEEEEEEEECSCC
T ss_pred C-----C---HHHHHHHHHHHhcCCEEEEECCC
Confidence 1 1 24678899999999999987643
No 332
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=83.03 E-value=4.8 Score=34.28 Aligned_cols=89 Identities=15% Similarity=0.103 Sum_probs=54.6
Q ss_pred CCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC--C-----CCccEEEecccccc
Q 025363 98 VKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--I-----PAADAIFMKWVLTT 168 (254)
Q Consensus 98 ~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~--~-----p~~D~v~~~~vlh~ 168 (254)
..+|+=+|+|. |......+... +.. ++++|. ++.++.++. ..+.++.||..+. + ..+|++++.--
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~-g~~-vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~~--- 77 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS-GVK-MVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAID--- 77 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCC-EEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECCS---
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCC-EEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECCC---
Confidence 35688888763 44444444432 567 999998 777776654 4577888999875 2 23587766331
Q ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 169 WTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 169 ~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
+++.... +-...+.+.|..++++-
T Consensus 78 -~~~~n~~-i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 78 -DPQTNLQ-LTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp -SHHHHHH-HHHHHHHHCTTCEEEEE
T ss_pred -ChHHHHH-HHHHHHHhCCCCeEEEE
Confidence 2344444 44455556788777663
No 333
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=82.69 E-value=4.8 Score=33.87 Aligned_cols=99 Identities=13% Similarity=-0.005 Sum_probs=60.9
Q ss_pred CCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCC----CC----C-Cc-cEEE
Q 025363 94 GFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK----SI----P-AA-DAIF 161 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~----~~----p-~~-D~v~ 161 (254)
..+++.+||-+|+|. |.++.++++.....+ +++.|. ++-++.+++.. .+.+..+-.+ .+ + .. |+|+
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~-Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~v~~~t~g~g~Dvvi 259 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAV-VIVGDLNPARLAHAKAQG-FEIADLSLDTPLHEQIAALLGEPEVDCAV 259 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSE-EEEEESCHHHHHHHHHTT-CEEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCe-EEEEcCCHHHHHHHHHcC-CcEEccCCcchHHHHHHHHhCCCCCCEEE
Confidence 477888999999764 889999999874335 888887 66555554432 2332211111 11 1 23 8887
Q ss_pred ecccc----------ccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 162 MKWVL----------TTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 162 ~~~vl----------h~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
-.-.- |+-. ....++.+.++|++||++++.-..
T Consensus 260 d~~G~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~G~iv~~G~~ 302 (398)
T 1kol_A 260 DAVGFEARGHGHEGAKHEA---PATVLNSLMQVTRVAGKIGIPGLY 302 (398)
T ss_dssp ECCCTTCBCSSTTGGGSBC---TTHHHHHHHHHEEEEEEEEECSCC
T ss_pred ECCCCcccccccccccccc---hHHHHHHHHHHHhcCCEEEEeccc
Confidence 53321 1111 124678889999999999886543
No 334
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=81.91 E-value=9.5 Score=26.63 Aligned_cols=88 Identities=19% Similarity=0.137 Sum_probs=53.3
Q ss_pred CCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC--C-----CCccEEEecccccc
Q 025363 98 VKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--I-----PAADAIFMKWVLTT 168 (254)
Q Consensus 98 ~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~--~-----p~~D~v~~~~vlh~ 168 (254)
..+|+=+|+|. |......+... +.. ++++|. ++.++.+++ ..+.++.+|..++ + ..+|++++.--
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~-v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~--- 80 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIP-LVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTIP--- 80 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCC-EEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS---
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCC-EEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEECC---
Confidence 35788888863 44444444332 457 999998 777666554 4678888998765 2 22488776321
Q ss_pred CCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 169 WTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 169 ~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
++.....+.. ..+.+.|+.+++.
T Consensus 81 -~~~~n~~~~~-~a~~~~~~~~iia 103 (140)
T 3fwz_A 81 -NGYEAGEIVA-SARAKNPDIEIIA 103 (140)
T ss_dssp -CHHHHHHHHH-HHHHHCSSSEEEE
T ss_pred -ChHHHHHHHH-HHHHHCCCCeEEE
Confidence 2334444444 4455677777665
No 335
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=81.87 E-value=9.3 Score=28.97 Aligned_cols=86 Identities=15% Similarity=0.160 Sum_probs=51.8
Q ss_pred eEEEecCcccHHHHHHHHHc--CCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC--C-----CCccEEEeccccccC
Q 025363 100 RLVDVGGSAGDCLRMILQKH--RFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--I-----PAADAIFMKWVLTTW 169 (254)
Q Consensus 100 ~vlDvG~G~G~~~~~l~~~~--~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~--~-----p~~D~v~~~~vlh~~ 169 (254)
+|+=+|+ |..+..+++.. .+.. ++++|. ++.++...+...+.++.+|..+. + ..+|++++.-
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~-v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~----- 73 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYG-VVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILT----- 73 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECC-----
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEec-----
Confidence 5666775 55555555543 2557 899998 66665533324678899998775 2 2358887632
Q ss_pred CHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 170 TDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 170 ~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
+++....++....+.+.|..+++.
T Consensus 74 ~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 74 PRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp SCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCeEEE
Confidence 223334455555566666777655
No 336
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=81.60 E-value=6.6 Score=32.48 Aligned_cols=97 Identities=14% Similarity=0.012 Sum_probs=59.2
Q ss_pred hhcCCCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--CCcEEEe-----CCCCCC----C-C
Q 025363 90 EGYNGFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--PGVTHIG-----GDMFKS----I-P 155 (254)
Q Consensus 90 ~~~~~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--~~i~~~~-----~d~~~~----~-p 155 (254)
+.. ...++.+||=+|+|. |.++.++++....-+ +++.|. ++-.+.+++. .-+.+.. .|+.+. . +
T Consensus 173 ~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~-Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 173 QRA-GVRLGDPVLICGAGPIGLITMLCAKAAGACP-LVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp HHH-TCCTTCCEEEECCSHHHHHHHHHHHHTTCCS-EEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSS
T ss_pred HHc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCC
Confidence 444 477888999998764 889999998875445 777876 5544443322 1222221 111111 1 2
Q ss_pred Cc-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 156 AA-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 156 ~~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.. |+|+-.-. . ...++.+.++|+|||++++.-.
T Consensus 251 ~g~Dvvid~~g-----~---~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 251 IEPAVALECTG-----V---ESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CCCSEEEECSC-----C---HHHHHHHHHHSCTTCEEEECCC
T ss_pred CCCCEEEECCC-----C---hHHHHHHHHHhcCCCEEEEEcc
Confidence 23 88775321 1 2457888899999999998754
No 337
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=80.84 E-value=8.8 Score=31.45 Aligned_cols=90 Identities=14% Similarity=0.091 Sum_probs=57.6
Q ss_pred CCCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCC-CC--------CCc-cEEE
Q 025363 94 GFKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK-SI--------PAA-DAIF 161 (254)
Q Consensus 94 ~~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~-~~--------p~~-D~v~ 161 (254)
.. ++.+||-+|+| .|..+..+++.....+ +++.+. ++-.+.+++. --.++ |..+ ++ +.. |+|+
T Consensus 162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~-Vi~~~~~~~~~~~~~~l-a~~v~--~~~~~~~~~~~~~~~~~g~D~vi 236 (343)
T 2dq4_A 162 GV-SGKSVLITGAGPIGLMAAMVVRASGAGP-ILVSDPNPYRLAFARPY-ADRLV--NPLEEDLLEVVRRVTGSGVEVLL 236 (343)
T ss_dssp CC-TTSCEEEECCSHHHHHHHHHHHHTTCCS-EEEECSCHHHHGGGTTT-CSEEE--CTTTSCHHHHHHHHHSSCEEEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEECCCHHHHHHHHHh-HHhcc--CcCccCHHHHHHHhcCCCCCEEE
Confidence 36 78899999964 5888888888763327 999987 6666666553 21222 2211 11 123 7776
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
-.-. . ...++...++|+|+|++++.-.
T Consensus 237 d~~g-----~---~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 237 EFSG-----N---EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp ECSC-----C---HHHHHHHHHHEEEEEEEEECCC
T ss_pred ECCC-----C---HHHHHHHHHHHhcCCEEEEEec
Confidence 4321 1 2457888899999999988654
No 338
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=80.55 E-value=1.3 Score=36.66 Aligned_cols=98 Identities=11% Similarity=-0.024 Sum_probs=60.3
Q ss_pred hhcCCCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEe---CCCCCC----CCC-c-c
Q 025363 90 EGYNGFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIG---GDMFKS----IPA-A-D 158 (254)
Q Consensus 90 ~~~~~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~---~d~~~~----~p~-~-D 158 (254)
+.. ...++.+||-+|+|. |.++..+++.....+ ++++|. ++-.+.+++..--.++. .|+.+. .+. . |
T Consensus 160 ~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 160 ELA-NIKLGDTVCVIGIGPVGLMSVAGANHLGAGR-IFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp HHT-TCCTTCCEEEECCSHHHHHHHHHHHTTTCSS-EEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEE
T ss_pred Hhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcE-EEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCC
Confidence 444 477888999999764 888888888764337 888987 65555544321111221 121111 112 2 8
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
+|+-.-.- ...++.+.++|+|||++++.-..
T Consensus 238 ~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 238 KVVIAGGD--------VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp EEEECSSC--------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred EEEECCCC--------hHHHHHHHHHHhcCCEEEEeccc
Confidence 87742211 14578888999999999987643
No 339
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=80.38 E-value=1.5 Score=36.65 Aligned_cols=93 Identities=12% Similarity=0.028 Sum_probs=56.3
Q ss_pred CCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC---CCCCCC-CCccEEEeccccc
Q 025363 94 GFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG---DMFKSI-PAADAIFMKWVLT 167 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~---d~~~~~-p~~D~v~~~~vlh 167 (254)
..+++.+||-+|+|. |..+..+++.. +.+ +++.+. ++-.+.+++..--.++.. |+.+.. ...|+|+-.-.-
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~-Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~- 267 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM-GAH-VVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAA- 267 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCE-EEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSS-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCC-
Confidence 367788999999874 88888888876 567 888886 554444433211111111 111111 123887753221
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
...++.+.++|+|+|++++.-.
T Consensus 268 -------~~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 268 -------PHNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp -------CCCHHHHHTTEEEEEEEEECCC
T ss_pred -------HHHHHHHHHHhccCCEEEEecc
Confidence 1235677889999999987654
No 340
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=79.94 E-value=14 Score=30.06 Aligned_cols=96 Identities=11% Similarity=-0.003 Sum_probs=57.8
Q ss_pred CCCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCC---C---CCC---ccEEEe
Q 025363 94 GFKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK---S---IPA---ADAIFM 162 (254)
Q Consensus 94 ~~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~---~---~p~---~D~v~~ 162 (254)
...++.+||=.|+| .|.++..+++...... +++.|. ++-++.+++..--..+..+-.+ . ..+ .|+|+-
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~-vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d 235 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKS-VTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILE 235 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSE-EEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEE
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcE-EEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccccc
Confidence 36778899988875 5667777888765445 678887 6655555544222222211111 0 011 266554
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 163 KWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 163 ~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
.-. ....++.+.++|+|||++++.-...
T Consensus 236 ~~G--------~~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 236 TAG--------VPQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp CSC--------SHHHHHHHHHHCCTTCEEEECCCCS
T ss_pred ccc--------ccchhhhhhheecCCeEEEEEeccC
Confidence 221 1256778889999999999876543
No 341
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=79.52 E-value=1.2 Score=36.03 Aligned_cols=54 Identities=20% Similarity=0.282 Sum_probs=34.1
Q ss_pred CCcEEEeCCCCCC---CCC-c-cEEEecccccc---CCH---------------HHHHHHHHHHHHhCCCCCEEEEE
Q 025363 141 PGVTHIGGDMFKS---IPA-A-DAIFMKWVLTT---WTD---------------DECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 141 ~~i~~~~~d~~~~---~p~-~-D~v~~~~vlh~---~~~---------------~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
.++.++.+|..+. ++. . |+|++.=-... +.+ .....++++++++|||||.+++.
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 4567888888763 343 2 88887432221 100 11346889999999999998775
No 342
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=79.41 E-value=4.8 Score=33.50 Aligned_cols=94 Identities=12% Similarity=0.019 Sum_probs=56.9
Q ss_pred CCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCC-----CCCCC----CC-ccEEE
Q 025363 94 GFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGD-----MFKSI----PA-ADAIF 161 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d-----~~~~~----p~-~D~v~ 161 (254)
...++.+||-+|+|. |..+..+++.....+ +++.|. ++-.+.+++..--.++..+ +.+.+ +. .|+|+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vi 266 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGAAR-IIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF 266 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCe-EEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEE
Confidence 467788999999764 888888888864336 888885 5555444432111122111 11111 11 38877
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCC-CEEEEEcc
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAG-GKLIACEP 196 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pg-G~l~i~d~ 196 (254)
-.-. . ...++...++|+|+ |++++.-.
T Consensus 267 d~~g-----~---~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 267 EVIG-----R---LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp ECSC-----C---HHHHHHHHHHBCTTTCEEEECSC
T ss_pred ECCC-----C---HHHHHHHHHHhhcCCcEEEEecc
Confidence 4321 1 24578888999999 99988654
No 343
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=79.02 E-value=4.4 Score=33.76 Aligned_cols=94 Identities=11% Similarity=-0.034 Sum_probs=57.3
Q ss_pred CCCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC-----CCCCCC----C-CccEEE
Q 025363 94 GFKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG-----DMFKSI----P-AADAIF 161 (254)
Q Consensus 94 ~~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~-----d~~~~~----p-~~D~v~ 161 (254)
...++.+||-+|+| .|.++..+++.....+ +++.|. ++-.+.+++..--.++.. |+.+.+ + ..|+|+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~-Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvi 266 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASR-IIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAV 266 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSE-EEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCe-EEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEE
Confidence 46778899999976 4888889998764336 888885 554444443211112211 111111 1 138877
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCC-CEEEEEcc
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAG-GKLIACEP 196 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pg-G~l~i~d~ 196 (254)
-.-.- ...++.+.++|+|+ |++++.-.
T Consensus 267 d~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 267 ECAGR--------IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp ECSCC--------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ECCCC--------HHHHHHHHHHHhcCCCEEEEEcc
Confidence 43211 24578889999999 99987654
No 344
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=78.79 E-value=6.2 Score=32.83 Aligned_cols=94 Identities=14% Similarity=0.033 Sum_probs=57.1
Q ss_pred CCCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCC-----CCCCC----C-CccEEE
Q 025363 94 GFKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGD-----MFKSI----P-AADAIF 161 (254)
Q Consensus 94 ~~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d-----~~~~~----p-~~D~v~ 161 (254)
...++.+||-+|+| .|..+..+++.....+ +++.|. ++-.+.+++..--.++..+ +.+.+ + ..|+|+
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vi 267 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKR-IIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSL 267 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEE
Confidence 46778899999976 4888888988864336 888886 5555444432111122111 11101 1 138877
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCC-CEEEEEcc
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAG-GKLIACEP 196 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pg-G~l~i~d~ 196 (254)
-.-.- ...++.+.++|+|+ |++++.-.
T Consensus 268 d~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 268 ECVGN--------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp ECSCC--------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred ECCCC--------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 43211 24578889999999 99988654
No 345
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=78.77 E-value=22 Score=27.85 Aligned_cols=93 Identities=9% Similarity=-0.033 Sum_probs=54.1
Q ss_pred CeEEEecCcccHHHHHHHHHcC--CCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-CCCccEEEeccccccCCHHHH
Q 025363 99 KRLVDVGGSAGDCLRMILQKHR--FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IPAADAIFMKWVLTTWTDDEC 174 (254)
Q Consensus 99 ~~vlDvG~G~G~~~~~l~~~~~--~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-~p~~D~v~~~~vlh~~~~~~~ 174 (254)
++||=.| + |..+..+++++- +.+ +++++. +.-...... .+++++.+|+.+. +.+.|+|+.........+...
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~~~~~ 81 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWR-IIGTSRNPDQMEAIRA-SGAEPLLWPGEEPSLDGVTHLLISTAPDSGGDPVL 81 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCE-EEEEESCGGGHHHHHH-TTEEEEESSSSCCCCTTCCEEEECCCCBTTBCHHH
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCE-EEEEEcChhhhhhHhh-CCCeEEEecccccccCCCCEEEECCCccccccHHH
Confidence 5788888 4 888888777652 345 888877 432222111 5789999998664 333488776444433233344
Q ss_pred HHHHHHHHHhCCCCCEEEEEc
Q 025363 175 KLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 175 ~~il~~~~~~L~pgG~l~i~d 195 (254)
..+++.+++.-..-.+++...
T Consensus 82 ~~l~~a~~~~~~~~~~~v~~S 102 (286)
T 3ius_A 82 AALGDQIAARAAQFRWVGYLS 102 (286)
T ss_dssp HHHHHHHHHTGGGCSEEEEEE
T ss_pred HHHHHHHHhhcCCceEEEEee
Confidence 556666655322225666543
No 346
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=77.56 E-value=5.1 Score=32.86 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=57.3
Q ss_pred CCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCC---cEEEeCCCCCCC----CC-c-cEEEe
Q 025363 94 GFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPG---VTHIGGDMFKSI----PA-A-DAIFM 162 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~---i~~~~~d~~~~~----p~-~-D~v~~ 162 (254)
...++.+||=+|+|. |.++..++++....+ +++.|. ++-++.+++..- +.....|+.+.+ .. . |+++.
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~-Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~ 238 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAK-VIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIV 238 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCE-EEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEE
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCE-EEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEE
Confidence 367788999999875 566777777777778 999997 655555444322 222222222211 11 2 55543
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 163 KWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 163 ~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
... . ...+....++|+|+|++++.-.
T Consensus 239 ~~~----~----~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 239 CAV----A----RIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp CCS----C----HHHHHHHHHTEEEEEEEEECCC
T ss_pred ecc----C----cchhheeheeecCCceEEEEec
Confidence 221 1 2567888899999999988653
No 347
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=77.25 E-value=4.9 Score=33.51 Aligned_cols=94 Identities=11% Similarity=-0.016 Sum_probs=57.2
Q ss_pred CCCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC-----CCCCCC----C-CccEEE
Q 025363 94 GFKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG-----DMFKSI----P-AADAIF 161 (254)
Q Consensus 94 ~~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~-----d~~~~~----p-~~D~v~ 161 (254)
...++.+||-+|+| .|.++..+++.....+ +++.|. ++-.+.+++..--.++.. |+.+.+ + ..|+|+
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~-Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvi 270 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGASR-IIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSL 270 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCe-EEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEE
Confidence 46778899999976 4888889998864336 888886 555444443211112211 111111 1 138877
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCC-CEEEEEcc
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAG-GKLIACEP 196 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pg-G~l~i~d~ 196 (254)
-.-. . ...++.+.++|+|| |++++.-.
T Consensus 271 d~~G-----~---~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 271 DCAG-----T---AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp ESSC-----C---HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ECCC-----C---HHHHHHHHHHhhcCCCEEEEECC
Confidence 4321 1 24578889999999 99988654
No 348
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=77.10 E-value=7 Score=31.95 Aligned_cols=79 Identities=15% Similarity=0.151 Sum_probs=50.7
Q ss_pred CCeEEEecCcccHHHHHHHHHcCC----CCeEEEeechHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHH
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRF----ICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDE 173 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~----~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~ 173 (254)
+..||=+|++.|.....|.+.+++ ++ .+++|........+...+|+++.. ++ +++
T Consensus 76 g~~VVYaGsAPG~HI~fL~~lF~~l~~~lk-wvLiDp~~f~~~Le~~~ni~li~~-ff-------------------de~ 134 (348)
T 1vpt_A 76 GATVVYIGSAPGTHIRYLRDHFYNLGVIIK-WMLIDGRHHDPILNGLRDVTLVTR-FV-------------------DEE 134 (348)
T ss_dssp TCEEEEESCSSCHHHHHHHHHHHHTTCCCE-EEEEESSCCCGGGTTCTTEEEEEC-CC-------------------CHH
T ss_pred CCeEEEeCcCCcchHHHHHHHhhhcCCceE-EEEECCCchhhhhcCCCcEEeehh-hc-------------------CHH
Confidence 459999999999999999998876 56 788886332233333345555432 22 122
Q ss_pred HHHHHHHHHHhCCCCCEEEEEccccCC
Q 025363 174 CKLIMENCYKALPAGGKLIACEPVLPD 200 (254)
Q Consensus 174 ~~~il~~~~~~L~pgG~l~i~d~~~~~ 200 (254)
-++.+++.+.....|+|.|....+
T Consensus 135 ---~i~~l~~~~~~~~vLfISDIRS~~ 158 (348)
T 1vpt_A 135 ---YLRSIKKQLHPSKIILISDVASAA 158 (348)
T ss_dssp ---HHHHHHHHHTTSCEEEEECCCC--
T ss_pred ---HHHHHHHHhcCCCEEEEEecccCC
Confidence 355666666667778888776543
No 349
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=76.97 E-value=5.1 Score=33.27 Aligned_cols=93 Identities=18% Similarity=0.150 Sum_probs=58.7
Q ss_pred CCCCCCeEEEec--CcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCC---CCCC----CCCc-cEEEe
Q 025363 94 GFKGVKRLVDVG--GSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGD---MFKS----IPAA-DAIFM 162 (254)
Q Consensus 94 ~~~~~~~vlDvG--~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d---~~~~----~p~~-D~v~~ 162 (254)
..+++.+||-+| ||.|..+..+++.. +.+ +++.+. ++-.+.+++..--..+..+ +.+. .+.. |+++-
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~-Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid 237 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCH-VIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYE 237 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHT-TCE-EEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCE-EEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEE
Confidence 367788999999 67899999999886 557 888887 5555444432111122111 1000 1222 87774
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 163 KWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 163 ~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
.-. . ..++.+.++|+++|++++.-..
T Consensus 238 ~~g-----~----~~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 238 SVG-----G----AMFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp CSC-----T----HHHHHHHHHEEEEEEEEECCCG
T ss_pred CCC-----H----HHHHHHHHHHhcCCEEEEEeCC
Confidence 322 1 3578888999999999886543
No 350
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=76.93 E-value=13 Score=27.78 Aligned_cols=93 Identities=10% Similarity=0.133 Sum_probs=53.0
Q ss_pred eEEEecCcccHHHHHHHHHc--CCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCC----CCccEEEeccccccCCHH
Q 025363 100 RLVDVGGSAGDCLRMILQKH--RFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSI----PAADAIFMKWVLTTWTDD 172 (254)
Q Consensus 100 ~vlDvG~G~G~~~~~l~~~~--~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~----p~~D~v~~~~vlh~~~~~ 172 (254)
+||=.| |+|..+..+++.+ .+.+ +++++. ++-.+... ++++++.+|+.+.. ...|+|+..-....-...
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHE-VTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCE-EEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTT
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCE-EEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcCCccccc
Confidence 566555 4566665555543 2456 888887 55444333 67999999997652 223887764433221122
Q ss_pred HHHHHHHHHHHhCCC--CCEEEEEcc
Q 025363 173 ECKLIMENCYKALPA--GGKLIACEP 196 (254)
Q Consensus 173 ~~~~il~~~~~~L~p--gG~l~i~d~ 196 (254)
......+++.++++. .+++++.-.
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEec
Confidence 234455566666654 367776543
No 351
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=76.91 E-value=11 Score=29.40 Aligned_cols=90 Identities=11% Similarity=0.108 Sum_probs=50.1
Q ss_pred CCeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHHH
Q 025363 98 VKRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDEC 174 (254)
Q Consensus 98 ~~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~ 174 (254)
..+|.=||+|. |. ++..+.+. ..-. ++++|. ++..+...+.-++.. ..|..+...++|+|++.- ++...
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~-g~~~-v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~Dvvi~av-----~~~~~ 81 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK-GFRI-VQVYSRTEESARELAQKVEAEY-TTDLAEVNPYAKLYIVSL-----KDSAF 81 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH-TCCE-EEEECSSHHHHHHHHHHTTCEE-ESCGGGSCSCCSEEEECC-----CHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC-CCeE-EEEEeCCHHHHHHHHHHcCCce-eCCHHHHhcCCCEEEEec-----CHHHH
Confidence 35788899873 33 33334443 2213 567787 554444332223433 223322244569988743 44455
Q ss_pred HHHHHHHHHhCCCCCEEEEEc
Q 025363 175 KLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 175 ~~il~~~~~~L~pgG~l~i~d 195 (254)
..+++++.+.++||..++..-
T Consensus 82 ~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 82 AELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp HHHHHHHHTTCCTTCEEEECC
T ss_pred HHHHHHHHhhcCCCcEEEECC
Confidence 788888888888877655443
No 352
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=76.87 E-value=21 Score=27.22 Aligned_cols=88 Identities=15% Similarity=0.088 Sum_probs=52.9
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-------CCCccEEEecccccc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-------IPAADAIFMKWVLTT 168 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-------~p~~D~v~~~~vlh~ 168 (254)
...+|+=+|+ |..+..+++.......++++|. ++.++... ..+.++.+|..+. +..+|++++.--
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~--- 80 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDLE--- 80 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS---
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC---
Confidence 3567888876 6777778777643211566676 66555544 4588999998764 123588776421
Q ss_pred CCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 169 WTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 169 ~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
+++.. ..+....+.+.|+.+++.
T Consensus 81 -~d~~n-~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 81 -SDSET-IHCILGIRKIDESVRIIA 103 (234)
T ss_dssp -CHHHH-HHHHHHHHHHCSSSEEEE
T ss_pred -CcHHH-HHHHHHHHHHCCCCeEEE
Confidence 23333 334445555778767665
No 353
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=76.72 E-value=7.9 Score=31.56 Aligned_cols=93 Identities=17% Similarity=0.116 Sum_probs=58.4
Q ss_pred CCCCCCeEEEec--CcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCC---CCCCC-----CCc-cEEE
Q 025363 94 GFKGVKRLVDVG--GSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGD---MFKSI-----PAA-DAIF 161 (254)
Q Consensus 94 ~~~~~~~vlDvG--~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d---~~~~~-----p~~-D~v~ 161 (254)
...++.+||-+| +|.|..+..+++.. +.+ +++.+. ++-++.+++...-..+..+ +.+.+ +.. |+++
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~-Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vi 222 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMK-GAH-TIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASF 222 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHT-TCE-EEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEE
Confidence 467889999998 46788888888876 457 888887 6655554443221222211 11110 123 8777
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
-.-. . ..++.+.+.|+|||++++.-..
T Consensus 223 d~~g-----~----~~~~~~~~~l~~~G~iv~~G~~ 249 (334)
T 3qwb_A 223 DSVG-----K----DTFEISLAALKRKGVFVSFGNA 249 (334)
T ss_dssp ECCG-----G----GGHHHHHHHEEEEEEEEECCCT
T ss_pred ECCC-----h----HHHHHHHHHhccCCEEEEEcCC
Confidence 5322 1 3467888999999999987543
No 354
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=76.62 E-value=5.9 Score=32.30 Aligned_cols=90 Identities=17% Similarity=0.163 Sum_probs=56.0
Q ss_pred CCCCCCeEEEecC--cccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCC--CC--------CCc-cE
Q 025363 94 GFKGVKRLVDVGG--SAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK--SI--------PAA-DA 159 (254)
Q Consensus 94 ~~~~~~~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~--~~--------p~~-D~ 159 (254)
...++.+||-.|| |.|..+..+++.. +.+ +++.|. ++..+.+++...-... |..+ +. ... |+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~-V~~~~~~~~~~~~~~~~g~~~~~--d~~~~~~~~~~~~~~~~~~~d~ 217 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLK-GCK-VVGAAGSDEKIAYLKQIGFDAAF--NYKTVNSLEEALKKASPDGYDC 217 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHT-TCE-EEEEESSHHHHHHHHHTTCSEEE--ETTSCSCHHHHHHHHCTTCEEE
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHHHhcCCcEEE--ecCCHHHHHHHHHHHhCCCCeE
Confidence 3677889999996 6788888888775 457 888886 5555444322111111 2222 11 112 77
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 160 IFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 160 v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
++-.-. . ..++.+.++|+|||++++.-.
T Consensus 218 vi~~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 218 YFDNVG-----G----EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEESSC-----H----HHHHHHHTTEEEEEEEEECCC
T ss_pred EEECCC-----h----HHHHHHHHHHhcCCEEEEEec
Confidence 664322 1 247888899999999988654
No 355
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=76.33 E-value=9.8 Score=31.85 Aligned_cols=91 Identities=10% Similarity=-0.008 Sum_probs=57.6
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec--h-HHH-hhCCCC----CCcEEEeCCCCCCCCC-ccEEEeccccc
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL--P-EVV-AEAPSI----PGVTHIGGDMFKSIPA-ADAIFMKWVLT 167 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~--~-~~~-~~~~~~----~~i~~~~~d~~~~~p~-~D~v~~~~vlh 167 (254)
...+||.|+.+.|.++..++...+ ...-|. . ..+ .+.+.+ .++++.. ..+..+. .|++++...=
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~~----~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~lpk- 110 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHKP----YSIGDSYISELATRENLRLNGIDESSVKFLD--STADYPQQPGVVLIKVPK- 110 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGCC----EEEESCHHHHHHHHHHHHHTTCCGGGSEEEE--TTSCCCSSCSEEEEECCS-
T ss_pred CCCCEEEECCCCCHHHHhhccCCc----eEEEhHHHHHHHHHHHHHHcCCCccceEecc--cccccccCCCEEEEEcCC-
Confidence 456899999999999998875422 222353 1 111 111111 2356543 3344444 4988875432
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+-......|..+...|+||+.+++...
T Consensus 111 --~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 111 --TLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp --CHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred --CHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 236778899999999999999987654
No 356
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=76.28 E-value=4.5 Score=33.65 Aligned_cols=94 Identities=15% Similarity=0.045 Sum_probs=56.7
Q ss_pred CCCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC-----CCCCCC----CC-ccEEE
Q 025363 94 GFKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG-----DMFKSI----PA-ADAIF 161 (254)
Q Consensus 94 ~~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~-----d~~~~~----p~-~D~v~ 161 (254)
...++.+||-+|+| .|.++..+++.....+ +++.|. ++-.+.+++..--.++.. |+.+.+ +. .|+|+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vi 265 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASR-IIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSF 265 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSE-EEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCe-EEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEE
Confidence 46778899999976 4888888988764336 888885 554444433211112211 111111 11 38877
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCC-CEEEEEcc
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAG-GKLIACEP 196 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pg-G~l~i~d~ 196 (254)
-.-.- ...++.+.++|+|+ |++++.-.
T Consensus 266 d~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 266 ECIGN--------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp ECSCC--------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred ECCCc--------HHHHHHHHHhhccCCcEEEEEec
Confidence 43211 24578889999999 99988654
No 357
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=76.05 E-value=8.9 Score=31.36 Aligned_cols=90 Identities=10% Similarity=0.072 Sum_probs=57.3
Q ss_pred CCCCCCeEEEecC--cccHHHHHHHHHcCCCCeEEEeec-hHHHhhCC-CCCCcEEEeCCCCC--CC--------CCc-c
Q 025363 94 GFKGVKRLVDVGG--SAGDCLRMILQKHRFICEGINFDL-PEVVAEAP-SIPGVTHIGGDMFK--SI--------PAA-D 158 (254)
Q Consensus 94 ~~~~~~~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~-~~~~i~~~~~d~~~--~~--------p~~-D 158 (254)
...++.+||-+|+ |.|..+..+++.. +.+ +++.+. ++-.+.++ +..--..+ |..+ ++ +.. |
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~-V~~~~~~~~~~~~~~~~~g~~~~~--d~~~~~~~~~~~~~~~~~~~d 227 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMM-GCY-VVGSAGSKEKVDLLKTKFGFDDAF--NYKEESDLTAALKRCFPNGID 227 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCE-EEEEESSHHHHHHHHHTSCCSEEE--ETTSCSCSHHHHHHHCTTCEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHHHHHcCCceEE--ecCCHHHHHHHHHHHhCCCCc
Confidence 4677899999995 6888888888876 457 888887 55555443 22111122 2211 11 122 7
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+++-.- .. ..++.+.++|+|||++++.-.
T Consensus 228 ~vi~~~-----g~----~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 228 IYFENV-----GG----KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EEEESS-----CH----HHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECC-----CH----HHHHHHHHHHhcCCEEEEEcc
Confidence 776432 11 367888999999999988654
No 358
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=75.99 E-value=8.5 Score=32.41 Aligned_cols=98 Identities=13% Similarity=0.013 Sum_probs=55.0
Q ss_pred CCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC---CCCCC----CCC--ccEEEec
Q 025363 95 FKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG---DMFKS----IPA--ADAIFMK 163 (254)
Q Consensus 95 ~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~---d~~~~----~p~--~D~v~~~ 163 (254)
..++.+||=+|+| .|.++..+++.....+ ++++|. ++-.+.+++..--.++.. |+.+. .+. .|+|+-.
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~ 289 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASK-VILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEA 289 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEEC
Confidence 6678899989875 4888888888764336 888886 655555443221112211 11111 111 3888743
Q ss_pred cccccCCH-HHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 164 WVLTTWTD-DECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 164 ~vlh~~~~-~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
-.- . .....+++.+.++++|||++++.-..
T Consensus 290 ~g~----~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 290 TGV----PQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp SSC----HHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CCC----cHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 211 1 12223333344555999999987653
No 359
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=75.97 E-value=4 Score=33.20 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=51.8
Q ss_pred CCCeEEEecCcccH--HHHHHHHHcCCCCeEEEeec-hHHHhhCCC-----CCCcEEEeCCCCCCCCCccEEEecccccc
Q 025363 97 GVKRLVDVGGSAGD--CLRMILQKHRFICEGINFDL-PEVVAEAPS-----IPGVTHIGGDMFKSIPAADAIFMKWVLTT 168 (254)
Q Consensus 97 ~~~~vlDvG~G~G~--~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~-----~~~i~~~~~d~~~~~p~~D~v~~~~vlh~ 168 (254)
+..+|.=||+|+.. .+..++.+....+ ++++|. ++....+.+ .+++.. ..|. +.+.++|+|+..--...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~e-v~L~Di~~~~~g~a~dl~~~~~~~i~~-t~d~-~~l~~aD~Vi~aag~~~ 89 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADR-LVLLDLSEGTKGATMDLEIFNLPNVEI-SKDL-SASAHSKVVIFTVNSLG 89 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSE-EEEECCC-----CHHHHHHHTCTTEEE-ESCG-GGGTTCSEEEECCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCE-EEEEcCCcchHHHHHHHhhhcCCCeEE-eCCH-HHHCCCCEEEEcCCCCC
Confidence 34689999998533 5555555543226 888998 431111111 145665 3565 55667799998642210
Q ss_pred ----------CCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 169 ----------WTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 169 ----------~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
-+-+-..++++++.+.. |++++++..
T Consensus 90 pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~s 125 (303)
T 2i6t_A 90 SSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVAS 125 (303)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcC
Confidence 00012345666666665 999987743
No 360
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=75.80 E-value=17 Score=25.11 Aligned_cols=86 Identities=10% Similarity=0.026 Sum_probs=50.0
Q ss_pred CCeEEEecCcccHHHHHHHHHc--CCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC--C-----CCccEEEeccccc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKH--RFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--I-----PAADAIFMKWVLT 167 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~--~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~--~-----p~~D~v~~~~vlh 167 (254)
..+|+=+|+| ..+..+++.+ .+.+ ++++|. ++.++..+. ..+.++.+|..++ + ..+|+++..--
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~-V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~-- 79 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKK-VLAVDKSKEKIELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLITGS-- 79 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEECCS--
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCe-EEEEECCHHHHHHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEEecC--
Confidence 3578888885 3444444432 2557 999998 666655543 3578888998765 1 23488776332
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
+++....+...+++ +. ..+++.
T Consensus 80 --~~~~n~~~~~~a~~-~~-~~~iia 101 (141)
T 3llv_A 80 --DDEFNLKILKALRS-VS-DVYAIV 101 (141)
T ss_dssp --CHHHHHHHHHHHHH-HC-CCCEEE
T ss_pred --CHHHHHHHHHHHHH-hC-CceEEE
Confidence 33444444444444 44 445444
No 361
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=75.57 E-value=1.5 Score=36.19 Aligned_cols=92 Identities=13% Similarity=-0.023 Sum_probs=57.0
Q ss_pred CCCCCeEEEecCc-ccHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCCCCCcEEEe----CCCCCCC--C-CccEEEecc
Q 025363 95 FKGVKRLVDVGGS-AGDCLRMILQKH-RFICEGINFDL-PEVVAEAPSIPGVTHIG----GDMFKSI--P-AADAIFMKW 164 (254)
Q Consensus 95 ~~~~~~vlDvG~G-~G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~~~~i~~~~----~d~~~~~--p-~~D~v~~~~ 164 (254)
. ++.+||-+|+| .|..+..+++.. |+.+ +++.+. ++-.+.+++..--.++. .|+.+.. + ..|+|+-.-
T Consensus 169 ~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~ 246 (344)
T 2h6e_A 169 F-AEPVVIVNGIGGLAVYTIQILKALMKNIT-IVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLV 246 (344)
T ss_dssp C-SSCEEEEECCSHHHHHHHHHHHHHCTTCE-EEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHhcCCCE-EEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECC
Confidence 5 78899999976 488888888875 4678 999986 55554443321111111 1111111 2 138877533
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 165 VLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 165 vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.- ...++.+.++|+|+|++++.-.
T Consensus 247 g~--------~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 247 GT--------EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp CC--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CC--------hHHHHHHHHHhhcCCEEEEeCC
Confidence 21 2357888899999999988654
No 362
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=74.76 E-value=7.6 Score=31.67 Aligned_cols=96 Identities=14% Similarity=0.106 Sum_probs=59.5
Q ss_pred hhcCCCCCCCeEEEecC--cccHHHHHHHHHcCCCCeEEEeec-hHHHhhC-CCCCCcEEEeC---CCCCC----CCCc-
Q 025363 90 EGYNGFKGVKRLVDVGG--SAGDCLRMILQKHRFICEGINFDL-PEVVAEA-PSIPGVTHIGG---DMFKS----IPAA- 157 (254)
Q Consensus 90 ~~~~~~~~~~~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~-~~~~~i~~~~~---d~~~~----~p~~- 157 (254)
+.. ...++.+||-+|+ |.|..+..+++.. +.+ +++.+. ++-.+.+ ++..--..+.. |+.+. .+..
T Consensus 143 ~~~-~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~-Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 143 DVG-QPKNGETVVISGAAGAVGSVAGQIARLK-GCR-VVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp HTT-CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCE-EEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred Hhc-CCCCCCEEEEECCCCHHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCc
Confidence 444 4778899999997 6788888888876 447 888886 6555554 33321111111 11000 1222
Q ss_pred cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 158 DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 158 D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
|+++-.- .. ..++.+.+.|+|+|++++.-..
T Consensus 220 d~vi~~~-----g~----~~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 220 DVFFDNV-----GG----EILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp EEEEESS-----CH----HHHHHHHTTEEEEEEEEECCCG
T ss_pred eEEEECC-----Cc----chHHHHHHHHhhCCEEEEEeec
Confidence 7766422 11 3678889999999999987543
No 363
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=74.66 E-value=17 Score=24.71 Aligned_cols=87 Identities=18% Similarity=0.093 Sum_probs=47.7
Q ss_pred CCeEEEecCcccHHHHHHHHHc--CCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-------CCCccEEEeccccc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKH--RFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-------IPAADAIFMKWVLT 167 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~--~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-------~p~~D~v~~~~vlh 167 (254)
.++|+=+|+| ..+..+++.+ .+.+ ++++|. ++..+.......+.++.+|..+. ...+|+|+..-
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~-v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~--- 77 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHD-IVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT--- 77 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC---
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee---
Confidence 4578888774 4444444332 2456 888887 65554443222566777776543 22358877652
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
++.+....+..+.+.++++ ++++
T Consensus 78 --~~~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 78 --GKEEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp --SCHHHHHHHHHHHHHTTCC-CEEE
T ss_pred --CCchHHHHHHHHHHHcCCC-EEEE
Confidence 2223334455556667775 5444
No 364
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=74.58 E-value=14 Score=29.14 Aligned_cols=84 Identities=15% Similarity=0.054 Sum_probs=46.8
Q ss_pred eEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHHHHH
Q 025363 100 RLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKL 176 (254)
Q Consensus 100 ~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~~~ 176 (254)
+|.=||+|. |. ++..+.+. +.+ ++++|. ++..+...+..-......|..+ ..++|+|++.- ++.....
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~D~vi~av-----~~~~~~~ 72 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR--GHY-LIGVSRQQSTCEKAVERQLVDEAGQDLSL-LQTAKIIFLCT-----PIQLILP 72 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCE-EEEECSCHHHHHHHHHTTSCSEEESCGGG-GTTCSEEEECS-----CHHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHC--CCE-EEEEECCHHHHHHHHhCCCCccccCCHHH-hCCCCEEEEEC-----CHHHHHH
Confidence 567788763 22 23333333 346 888887 6555444322111111223322 23459988743 4456678
Q ss_pred HHHHHHHhCCCCCEEE
Q 025363 177 IMENCYKALPAGGKLI 192 (254)
Q Consensus 177 il~~~~~~L~pgG~l~ 192 (254)
+++++...++|+..++
T Consensus 73 ~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 73 TLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HHHHHGGGSCTTCEEE
T ss_pred HHHHHHhhCCCCCEEE
Confidence 8889988898877554
No 365
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=73.79 E-value=1 Score=36.73 Aligned_cols=92 Identities=17% Similarity=0.089 Sum_probs=54.7
Q ss_pred hhcCCCCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeCCCCCCCCCc-cEEEeccccc
Q 025363 90 EGYNGFKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAA-DAIFMKWVLT 167 (254)
Q Consensus 90 ~~~~~~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~~p~~-D~v~~~~vlh 167 (254)
+.. ..+++.+||=+|+| .|.++..+++... .+ +++.+.++-.+.+++.. ...+.-| .+.++.. |+|+-.-.
T Consensus 136 ~~~-~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~-Vi~~~~~~~~~~~~~lG-a~~v~~d-~~~v~~g~Dvv~d~~g-- 208 (315)
T 3goh_A 136 EKI-PLTKQREVLIVGFGAVNNLLTQMLNNAG-YV-VDLVSASLSQALAAKRG-VRHLYRE-PSQVTQKYFAIFDAVN-- 208 (315)
T ss_dssp TTS-CCCSCCEEEEECCSHHHHHHHHHHHHHT-CE-EEEECSSCCHHHHHHHT-EEEEESS-GGGCCSCEEEEECC----
T ss_pred hhc-CCCCCCEEEEECCCHHHHHHHHHHHHcC-CE-EEEEEChhhHHHHHHcC-CCEEEcC-HHHhCCCccEEEECCC--
Confidence 444 47788999999975 5889999998874 47 88877543333333221 2221124 2234444 88774221
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
. ..+..+.++|+|+|+++..-
T Consensus 209 ---~----~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 ---S----QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ------------TTGGGEEEEEEEEEEC
T ss_pred ---c----hhHHHHHHHhcCCCEEEEEe
Confidence 1 12356778999999999874
No 366
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=73.79 E-value=4.9 Score=33.35 Aligned_cols=93 Identities=14% Similarity=0.012 Sum_probs=58.2
Q ss_pred CCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCC---CCCCC----CC-c-cEEEe
Q 025363 94 GFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGD---MFKSI----PA-A-DAIFM 162 (254)
Q Consensus 94 ~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d---~~~~~----p~-~-D~v~~ 162 (254)
..+++.+||-+|+|. |..+..+++.. +.+ +++.+. ++-.+.+++..--.++..+ +.+.+ +. . |+|+-
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid 263 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKAT-GAE-VIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILE 263 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHT-TCE-EEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCE-EEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEE
Confidence 477889999999764 88888888876 457 888887 5555554432211222211 11110 11 3 88775
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 163 KWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 163 ~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
.-. . ..++.+.++|+|||++++.-..
T Consensus 264 ~~g-~--------~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 264 IAG-G--------AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp ETT-S--------SCHHHHHHHEEEEEEEEEECCC
T ss_pred CCC-h--------HHHHHHHHHhhcCCEEEEEecC
Confidence 332 1 2467788899999999987654
No 367
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=73.66 E-value=2.6 Score=36.37 Aligned_cols=91 Identities=19% Similarity=0.100 Sum_probs=62.1
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeechHHHh-------hCCCCCCcEEEeCCCCCCCCCccEEEeccccccC
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDLPEVVA-------EAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTW 169 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~-------~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~ 169 (254)
.+++|.=||+|+=..+.++.-+-.++. +++--.+.-.. .+.+ +..++ +++.+-.+.+|+|++. .
T Consensus 36 kgK~IaVIGyGsQG~AqAlNLRDSGv~-V~Vglr~~s~~e~~~S~~~A~~-~Gf~v--~~~~eA~~~ADvV~~L-----~ 106 (491)
T 3ulk_A 36 QGKKVVIVGCGAQGLNQGLNMRDSGLD-ISYALRKEAIAEKRASWRKATE-NGFKV--GTYEELIPQADLVINL-----T 106 (491)
T ss_dssp TTSEEEEESCSHHHHHHHHHHHHTTCE-EEEEECHHHHHTTCHHHHHHHH-TTCEE--EEHHHHGGGCSEEEEC-----S
T ss_pred cCCEEEEeCCChHhHHHHhHHHhcCCc-EEEEeCCCCcccccchHHHHHH-CCCEe--cCHHHHHHhCCEEEEe-----C
Confidence 368999999999888888887777777 65443333321 1211 33332 3333335557998862 4
Q ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 170 TDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 170 ~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
||+.-.++.+.+...||||-.|.+..-
T Consensus 107 PD~~q~~vy~~I~p~lk~G~~L~faHG 133 (491)
T 3ulk_A 107 PDKQHSDVVRTVQPLMKDGAALGYSHG 133 (491)
T ss_dssp CGGGHHHHHHHHGGGSCTTCEEEESSC
T ss_pred ChhhHHHHHHHHHhhCCCCCEEEecCc
Confidence 677777888999999999999998654
No 368
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=73.24 E-value=29 Score=30.16 Aligned_cols=99 Identities=13% Similarity=0.025 Sum_probs=55.1
Q ss_pred CCCeEEEecCcccHHHHH-HHHHcCCC-CeEEEeec-hH----HHhhCCCC---------------------CCcEEEeC
Q 025363 97 GVKRLVDVGGSAGDCLRM-ILQKHRFI-CEGINFDL-PE----VVAEAPSI---------------------PGVTHIGG 148 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~-l~~~~~~~-~~~~~~D~-~~----~~~~~~~~---------------------~~i~~~~~ 148 (254)
+.++|.=||.|.=....+ .+...|+. + ++++|. ++ .++...+. .++.+. .
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~-V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~t-t 94 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEK-VLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECT-P 94 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCE-EEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEE-S
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCe-EEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEe-C
Confidence 356888899885443333 22233355 7 999998 66 55444331 223332 2
Q ss_pred CCCCCCCCccEEEecccccc-------CCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 149 DMFKSIPAADAIFMKWVLTT-------WTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 149 d~~~~~p~~D~v~~~~vlh~-------~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
| .+...++|+|++.---.. -.-.......+.+.+.|+||..+ |.+...+
T Consensus 95 d-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iV-V~~STv~ 150 (478)
T 3g79_A 95 D-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLV-VLESTIT 150 (478)
T ss_dssp C-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEE-EECSCCC
T ss_pred c-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEE-EEeCCCC
Confidence 3 222444698886432221 11244667788999999988755 4444444
No 369
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=72.67 E-value=9.8 Score=30.27 Aligned_cols=83 Identities=18% Similarity=0.218 Sum_probs=47.8
Q ss_pred CeEEEecC-cc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHHH
Q 025363 99 KRLVDVGG-SA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDEC 174 (254)
Q Consensus 99 ~~vlDvG~-G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~ 174 (254)
.+|.=||+ |. |. ++..+++. +.+ ++++|. ++..+...+. .+.. .+..+....+|+|++.- ++...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~-V~~~~r~~~~~~~~~~~-g~~~--~~~~~~~~~aDvVi~av-----~~~~~ 80 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHH-LAAIEIAPEGRDRLQGM-GIPL--TDGDGWIDEADVVVLAL-----PDNII 80 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSE-EEEECCSHHHHHHHHHT-TCCC--CCSSGGGGTCSEEEECS-----CHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCE-EEEEECCHHHHHHHHhc-CCCc--CCHHHHhcCCCEEEEcC-----CchHH
Confidence 47888887 63 32 23333333 346 888887 5554443321 2222 12222234459988743 45557
Q ss_pred HHHHHHHHHhCCCCCEEE
Q 025363 175 KLIMENCYKALPAGGKLI 192 (254)
Q Consensus 175 ~~il~~~~~~L~pgG~l~ 192 (254)
..+++++...++||..++
T Consensus 81 ~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 81 EKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp HHHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHHHhCCCCCEEE
Confidence 788888888888876544
No 370
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=72.39 E-value=9.7 Score=31.24 Aligned_cols=93 Identities=13% Similarity=-0.017 Sum_probs=56.2
Q ss_pred CCCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC---CCCCC----CC-Cc-cEEEe
Q 025363 94 GFKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG---DMFKS----IP-AA-DAIFM 162 (254)
Q Consensus 94 ~~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~---d~~~~----~p-~~-D~v~~ 162 (254)
.. ++.+||-+|+| .|..+..+++.....+ +++.+. ++-.+.+++..--.++.. |+.+. .+ .. |+|+-
T Consensus 165 ~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~-Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 165 PI-SGKSVLITGAGPLGLLGIAVAKASGAYP-VIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp CC-TTCCEEEECCSHHHHHHHHHHHHTTCCS-EEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 36 78899999975 4888888888764337 888886 555444433211112111 11110 11 12 88775
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 163 KWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 163 ~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.-.. ...++.+.++|+|+|+++..-.
T Consensus 243 ~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 243 FSGA--------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp CSCC--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCC--------HHHHHHHHHHHhcCCEEEEEcc
Confidence 3221 2457888899999999988654
No 371
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=72.14 E-value=7.2 Score=31.95 Aligned_cols=91 Identities=15% Similarity=0.142 Sum_probs=57.1
Q ss_pred CCCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-C--------CCccEEEe
Q 025363 94 GFKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-I--------PAADAIFM 162 (254)
Q Consensus 94 ~~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-~--------p~~D~v~~ 162 (254)
...++.+||-+|+| .|..+..+++.. +.+ +++.+. ++-.+.+++..--.++ |..+. + ...|+++-
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~-Vi~~~~~~~~~~~~~~lGa~~~~--d~~~~~~~~~~~~~~~~~d~vid 236 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM-GLN-VVAVDIGDEKLELAKELGADLVV--NPLKEDAAKFMKEKVGGVHAAVV 236 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT-TCE-EEEECSCHHHHHHHHHTTCSEEE--CTTTSCHHHHHHHHHSSEEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHHCCCCEEe--cCCCccHHHHHHHHhCCCCEEEE
Confidence 36778899999875 688888888876 457 999986 6555544432111111 22211 1 12377764
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 163 KWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 163 ~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
.-. . ...++...++|+++|++++.-.
T Consensus 237 ~~g-----~---~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 237 TAV-----S---KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp SSC-----C---HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCC-----C---HHHHHHHHHHhhcCCEEEEecc
Confidence 322 1 2457888899999999987654
No 372
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=71.93 E-value=28 Score=28.13 Aligned_cols=83 Identities=17% Similarity=0.119 Sum_probs=45.7
Q ss_pred CeEEEecCcc-cH-HHHHHHHHcCC-CCeEEEeec-h-------HHHhhCCCCCCcEEEeC-CCCCCCCCccEEEecccc
Q 025363 99 KRLVDVGGSA-GD-CLRMILQKHRF-ICEGINFDL-P-------EVVAEAPSIPGVTHIGG-DMFKSIPAADAIFMKWVL 166 (254)
Q Consensus 99 ~~vlDvG~G~-G~-~~~~l~~~~~~-~~~~~~~D~-~-------~~~~~~~~~~~i~~~~~-d~~~~~p~~D~v~~~~vl 166 (254)
.+|.=||+|. |. ++..|++. + .+ ++++|. + +..+...+ ..+ .. +..+...++|+|++.-
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~--G~~~-V~~~dr~~~~~~~~~~~~~~~~~-~g~---~~~s~~e~~~~aDvVi~av-- 95 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR--NAAR-LAAYDLRFNDPAASGALRARAAE-LGV---EPLDDVAGIACADVVLSLV-- 95 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCSE-EEEECGGGGCTTTHHHHHHHHHH-TTC---EEESSGGGGGGCSEEEECC--
T ss_pred CeEEEECccHHHHHHHHHHHHc--CCCe-EEEEeCCCccccchHHHHHHHHH-CCC---CCCCHHHHHhcCCEEEEec--
Confidence 5788888763 22 22333333 3 46 889998 4 33333222 223 22 3322244469988743
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 167 TTWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 167 h~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
++....+.++.+...|+||..++-
T Consensus 96 ---p~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 96 ---VGAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp ---CGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred ---CCHHHHHHHHHHHhhcCCCCEEEE
Confidence 334445667888889988765443
No 373
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=71.07 E-value=8.1 Score=29.86 Aligned_cols=64 Identities=9% Similarity=-0.060 Sum_probs=38.8
Q ss_pred CCCeEEEecCcccHHHHH-HHHHcCCCCeEEEeec---hHHHhhCCCCCCcEEEeCCCCCC-CCCccEEEec
Q 025363 97 GVKRLVDVGGSAGDCLRM-ILQKHRFICEGINFDL---PEVVAEAPSIPGVTHIGGDMFKS-IPAADAIFMK 163 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~-l~~~~~~~~~~~~~D~---~~~~~~~~~~~~i~~~~~d~~~~-~p~~D~v~~~ 163 (254)
.+.+||=||||.-..... .+... +.. +++++. +++.+.+ +..++.++...+... +.++|+|+..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~-GA~-VtVvap~~~~~l~~l~-~~~~i~~i~~~~~~~dL~~adLVIaA 98 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE-GAA-ITVVAPTVSAEINEWE-AKGQLRVKRKKVGEEDLLNVFFIVVA 98 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG-CCC-EEEECSSCCHHHHHHH-HTTSCEEECSCCCGGGSSSCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCE-EEEECCCCCHHHHHHH-HcCCcEEEECCCCHhHhCCCCEEEEC
Confidence 467899999885443322 22222 556 777764 3332222 236788888777654 6667999874
No 374
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=70.73 E-value=30 Score=25.75 Aligned_cols=93 Identities=11% Similarity=0.007 Sum_probs=55.1
Q ss_pred eEEEecCcccHHHHHHHHHc--CCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-C---CCccEEEeccccc--cCC
Q 025363 100 RLVDVGGSAGDCLRMILQKH--RFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-I---PAADAIFMKWVLT--TWT 170 (254)
Q Consensus 100 ~vlDvG~G~G~~~~~l~~~~--~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-~---p~~D~v~~~~vlh--~~~ 170 (254)
+||=.| |+|..+..+++.+ .+.+ +++++. +.-...... .+++++.+|+.+. . ...|+|+..-... ...
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHE-VLAVVRDPQKAADRLG-ATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHTC-TTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCE-EEEEEecccccccccC-CCceEEecccccccHhhcccCCEEEECCccCCCcch
Confidence 455555 5666666666553 2456 888887 544443322 5799999999775 2 2238877544332 111
Q ss_pred HHHHHHHHHHHHHhCCC-CCEEEEEc
Q 025363 171 DDECKLIMENCYKALPA-GGKLIACE 195 (254)
Q Consensus 171 ~~~~~~il~~~~~~L~p-gG~l~i~d 195 (254)
........+++.++++. |+++++.-
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp THHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred hhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 23355666777777754 46777764
No 375
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=70.59 E-value=4 Score=33.43 Aligned_cols=51 Identities=18% Similarity=0.127 Sum_probs=38.5
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPS 139 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~ 139 (254)
+++.+++.+ -.++..|||.=||+|..+.+..+. +-+ .+++|+ +...+.+++
T Consensus 241 l~~~~i~~~--~~~~~~VlDpF~GsGtt~~aa~~~--gr~-~ig~e~~~~~~~~~~~ 292 (323)
T 1boo_A 241 LPEFFIRML--TEPDDLVVDIFGGSNTTGLVAERE--SRK-WISFEMKPEYVAASAF 292 (323)
T ss_dssp HHHHHHHHH--CCTTCEEEETTCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHG
T ss_pred HHHHHHHHh--CCCCCEEEECCCCCCHHHHHHHHc--CCC-EEEEeCCHHHHHHHHH
Confidence 455666655 356789999999999999987776 445 999999 766665554
No 376
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=70.49 E-value=3.9 Score=33.70 Aligned_cols=91 Identities=15% Similarity=0.078 Sum_probs=56.4
Q ss_pred CCCCCCeEEEecC--cccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCC--CC--------CCc-cE
Q 025363 94 GFKGVKRLVDVGG--SAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK--SI--------PAA-DA 159 (254)
Q Consensus 94 ~~~~~~~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~--~~--------p~~-D~ 159 (254)
...++.+||-+|+ |.|..+..+++.. +.+ +++.+. ++-.+.+++...-... |..+ ++ ... |+
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~-V~~~~~~~~~~~~~~~~g~~~~~--d~~~~~~~~~~~~~~~~~~~D~ 241 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM-GYR-VLGIDGGEGKEELFRSIGGEVFI--DFTKEKDIVGAVLKATDGGAHG 241 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT-TCE-EEEEECSTTHHHHHHHTTCCEEE--ETTTCSCHHHHHHHHHTSCEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCc-EEEEcCCHHHHHHHHHcCCceEE--ecCccHhHHHHHHHHhCCCCCE
Confidence 3677889999997 5788888888875 457 888885 5444443332111111 3221 11 112 77
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 160 IFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 160 v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
++-... . ...++.+.+.|+++|++++.-.
T Consensus 242 vi~~~g-----~---~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 242 VINVSV-----S---EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEECSS-----C---HHHHHHHTTSEEEEEEEEECCC
T ss_pred EEECCC-----c---HHHHHHHHHHHhcCCEEEEEeC
Confidence 664332 1 2467888999999999988654
No 377
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=70.46 E-value=6 Score=32.50 Aligned_cols=64 Identities=13% Similarity=-0.010 Sum_probs=41.3
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCC----CCCccEEEeccc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS----IPAADAIFMKWV 165 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~----~p~~D~v~~~~v 165 (254)
..+++|+-||.|.++..+.++ +.+.+..+|. +..++..+.+ +... .+|+.+. ++..|+++..--
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpP 80 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFP 80 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECC
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCC
Confidence 468999999999999999887 3442566787 5555443332 2221 4666553 334588887543
No 378
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=69.83 E-value=13 Score=31.37 Aligned_cols=91 Identities=15% Similarity=0.163 Sum_probs=49.3
Q ss_pred CCCCeEEEecCcccH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHH
Q 025363 96 KGVKRLVDVGGSAGD-CLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDE 173 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~ 173 (254)
..+++|+-.|+|+.. .....+...++.- ..++|. |.-.-..-...+|.++.-+.+...+ -|.|++.. | .-
T Consensus 317 ~~gk~v~~yGa~~~g~~l~~~~~~~~~~i-~~~~D~~~~k~g~~~~g~~ipi~~p~~~~~~~-~d~vl~~~----~--~~ 388 (416)
T 4e2x_A 317 AEGRSVVGYGATAKSATVTNFCGIGPDLV-HSVYDTTPDKQNRLTPGAHIPVRPASAFSDPY-PDYALLFA----W--NH 388 (416)
T ss_dssp HTTCCEEEECCCSHHHHHHHHHTCCTTTS-CCEEESCGGGTTEECTTTCCEEEEGGGCCSSC-CSEEEESC----G--GG
T ss_pred HcCCeEEEEccccHHHHHHHhcCCCccee-eEEEeCCccccCccCCCCCCcCCCHHHHhhcC-CCEEEEec----c--hh
Confidence 346789888887533 3333333333333 345665 4321111111347777765544311 16655422 1 11
Q ss_pred HHHHHHHHHHhCCCCCEEEEE
Q 025363 174 CKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 174 ~~~il~~~~~~L~pgG~l~i~ 194 (254)
..+|++++.....-||++++.
T Consensus 389 ~~ei~~~~~~~~~~g~~~~~~ 409 (416)
T 4e2x_A 389 AEEIMAKEQEFHQAGGRWILY 409 (416)
T ss_dssp HHHHHHHCHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEEE
Confidence 357888888888889999874
No 379
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=69.67 E-value=14 Score=29.63 Aligned_cols=86 Identities=10% Similarity=-0.024 Sum_probs=48.6
Q ss_pred CCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-CCCccEEEeccccccCCHHH
Q 025363 97 GVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IPAADAIFMKWVLTTWTDDE 173 (254)
Q Consensus 97 ~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-~p~~D~v~~~~vlh~~~~~~ 173 (254)
.+.+|+=||+| .|......++.+ +.+ ++++|. ++-.+.+.+ ..+.....+-.+. +.++|+|+..--++.++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~-V~~~dr~~~~~~~~~~-~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~-- 228 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL-GAK-VKVGARESDLLARIAE-MGMEPFHISKAAQELRDVDVCINTIPALVVTA-- 228 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCE-EEEEESSHHHHHHHHH-TTSEEEEGGGHHHHTTTCSEEEECCSSCCBCH--
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-CCE-EEEEECCHHHHHHHHH-CCCeecChhhHHHHhcCCCEEEECCChHHhCH--
Confidence 46789999865 344444555554 357 999997 443332222 1233332111112 455699998766665543
Q ss_pred HHHHHHHHHHhCCCCCEEEE
Q 025363 174 CKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 174 ~~~il~~~~~~L~pgG~l~i 193 (254)
+..+.||||+.++-
T Consensus 229 ------~~l~~mk~~~~lin 242 (293)
T 3d4o_A 229 ------NVLAEMPSHTFVID 242 (293)
T ss_dssp ------HHHHHSCTTCEEEE
T ss_pred ------HHHHhcCCCCEEEE
Confidence 23356899986553
No 380
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=69.62 E-value=9.3 Score=35.24 Aligned_cols=151 Identities=15% Similarity=0.063 Sum_probs=85.4
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC---------------------CCcEEEeCCCCCCCC
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI---------------------PGVTHIGGDMFKSIP 155 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~---------------------~~i~~~~~d~~~~~p 155 (254)
-.+|-=||+|+=...++..-...+.. ++++|. ++.++.+.+. .++++.. | .+.+.
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~-V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~ 392 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGIS-VVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSS-S-TKELS 392 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE-EEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEES-C-GGGGG
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCc-hhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccC-c-HHHHh
Confidence 46899999998776666666666888 999998 6655544321 2333321 1 22344
Q ss_pred CccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhh-------ccccCce-
Q 025363 156 AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMT-------IYRAKGN- 227 (254)
Q Consensus 156 ~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~- 227 (254)
++|+||-. ++.+. +--.++++++-+.++|+..|......++-..-.....+......++.+. +-...+.
T Consensus 393 ~aDlVIEA-V~E~l--~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~LVEvi~g~~ 469 (742)
T 3zwc_A 393 TVDLVVEA-VFEDM--NLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRY 469 (742)
T ss_dssp SCSEEEEC-CCSCH--HHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCCEEEEEECSS
T ss_pred hCCEEEEe-ccccH--HHHHHHHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCceEEEecCCC
Confidence 56888753 45544 4456899999999999988777554443110000000000111111100 0000011
Q ss_pred --ecCHHHHHHHHHhCCCCeeeEEEccCC
Q 025363 228 --HRTEQEFKQLGFFAGFPHLRLYRVLDY 254 (254)
Q Consensus 228 --~~t~~e~~~ll~~aGf~~~~~~~~~~~ 254 (254)
.-+.+...++.++.|-+.+.+.+.+|+
T Consensus 470 Ts~e~~~~~~~~~~~lgK~pV~vkd~pGF 498 (742)
T 3zwc_A 470 SSPTTIATVMSLSKKIGKIGVVVGNCYGF 498 (742)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEECCCSTTT
T ss_pred CCHHHHHHHHHHHHHhCCCCcccCCCCCc
Confidence 124566778888899888888777775
No 381
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=69.47 E-value=9.9 Score=30.59 Aligned_cols=86 Identities=6% Similarity=-0.028 Sum_probs=48.8
Q ss_pred CCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC-CCCCCCCCccEEEeccccccCCHHH
Q 025363 97 GVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG-DMFKSIPAADAIFMKWVLTTWTDDE 173 (254)
Q Consensus 97 ~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~-d~~~~~p~~D~v~~~~vlh~~~~~~ 173 (254)
.+.+|+=||+| .|......++.+ +.+ ++++|. ++-.+...+ ..+..... ++.+.+..+|+|+..--++.++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~-V~~~d~~~~~~~~~~~-~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~-- 230 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL-GAN-VKVGARSSAHLARITE-MGLVPFHTDELKEHVKDIDICINTIPSMILNQ-- 230 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT-TCE-EEEEESSHHHHHHHHH-TTCEEEEGGGHHHHSTTCSEEEECCSSCCBCH--
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC-CCE-EEEEECCHHHHHHHHH-CCCeEEchhhHHHHhhCCCEEEECCChhhhCH--
Confidence 46789999875 344444455554 457 999997 543332211 12333221 22111455699998777766542
Q ss_pred HHHHHHHHHHhCCCCCEEEE
Q 025363 174 CKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 174 ~~~il~~~~~~L~pgG~l~i 193 (254)
...+.||||+.++=
T Consensus 231 ------~~~~~mk~g~~lin 244 (300)
T 2rir_A 231 ------TVLSSMTPKTLILD 244 (300)
T ss_dssp ------HHHTTSCTTCEEEE
T ss_pred ------HHHHhCCCCCEEEE
Confidence 23467899986543
No 382
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=68.49 E-value=3.2 Score=34.02 Aligned_cols=54 Identities=13% Similarity=0.132 Sum_probs=35.0
Q ss_pred CCcEEEeCCCCCC---CCC-c-cEEEeccccc-----cCC-------HHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 141 PGVTHIGGDMFKS---IPA-A-DAIFMKWVLT-----TWT-------DDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 141 ~~i~~~~~d~~~~---~p~-~-D~v~~~~vlh-----~~~-------~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
.+..++.+|..+. ++. . |+|++.=-.. .+. ......+|++++++|+|||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 4566777776542 343 2 8888742221 111 124568899999999999998885
No 383
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=68.37 E-value=9.3 Score=32.75 Aligned_cols=57 Identities=19% Similarity=0.338 Sum_probs=37.3
Q ss_pred cCchHHHHHHHHHhcCCchhHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcC-----CCCeEEEeec
Q 025363 65 KIPEMNGLMRKAMSGVSVPFMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHR-----FICEGINFDL 130 (254)
Q Consensus 65 ~~~~~~~~~~~~m~~~~~~~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~-----~~~~~~~~D~ 130 (254)
..|+....|.+.++.+ +.++.+.. ...+|+|+|+|+|.++..+++... ..+ ++.++.
T Consensus 113 TAPeiS~~FGe~la~~----~~~~~~~~----g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~-y~iVE~ 174 (432)
T 4f3n_A 113 TAPELSPLFAQTLARP----VAQALDAS----GTRRVMEFGAGTGKLAAGLLTALAALGVELDE-YAIVDL 174 (432)
T ss_dssp SCGGGHHHHHHHHHHH----HHHHHHHH----TCCEEEEESCTTSHHHHHHHHHHHHTTCCCSE-EEEECT
T ss_pred CchhhhHHHHHHHHHH----HHHHHHhc----CCCeEEEeCCCccHHHHHHHHHHHhcCCCCce-EEEEEc
Confidence 4677777777665542 22222222 146999999999999999987642 124 777876
No 384
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=67.22 E-value=3.7 Score=33.82 Aligned_cols=95 Identities=11% Similarity=0.027 Sum_probs=57.3
Q ss_pred hhcCCCCCCCeEEEecC--cccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCC--CCCC----CCC-c-c
Q 025363 90 EGYNGFKGVKRLVDVGG--SAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGD--MFKS----IPA-A-D 158 (254)
Q Consensus 90 ~~~~~~~~~~~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d--~~~~----~p~-~-D 158 (254)
+.. ..+++.+||-+|+ |.|..+..+++.. +.+ +++.+. ++-.+.+++...-.+...+ +.+. .+. . |
T Consensus 153 ~~~-~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~-Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 153 RRG-QLRAGETVLVLGAAGGIGTAAIQIAKGM-GAK-VIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVD 229 (342)
T ss_dssp TTS-CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCE-EEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEE
T ss_pred Hhc-CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCce
Confidence 444 4678899999985 6788999999876 457 888887 5544444332211222222 1111 122 3 8
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+++-.-.- ..++.+.++|+|+|++++.-.
T Consensus 230 vvid~~g~---------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 230 MVVDPIGG---------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EEEESCC-----------CHHHHHHTEEEEEEEEEC--
T ss_pred EEEECCch---------hHHHHHHHhhcCCCEEEEEEc
Confidence 77753221 246788899999999998754
No 385
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=66.86 E-value=5.2 Score=33.47 Aligned_cols=94 Identities=16% Similarity=-0.029 Sum_probs=57.8
Q ss_pred CCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCC------CCCC----CCC-c-cEE
Q 025363 95 FKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGD------MFKS----IPA-A-DAI 160 (254)
Q Consensus 95 ~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d------~~~~----~p~-~-D~v 160 (254)
..++.+||-+|+| .|..+..+++.....+ +++.+. ++-.+.+++..--.++..+ +.+. .+. . |+|
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvv 271 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAEN-VIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFI 271 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSE-EEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCce-EEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEE
Confidence 5678899999854 6888899998864357 888886 6655555433211222211 1111 122 3 887
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 161 FMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 161 ~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
+-.-.- ...++.+.++|+|+|++++.-..
T Consensus 272 id~~g~--------~~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 272 LEATGD--------SRALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp EECSSC--------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred EECCCC--------HHHHHHHHHHHhcCCEEEEEecC
Confidence 743221 13567888999999999886543
No 386
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=65.22 E-value=1.9 Score=35.85 Aligned_cols=95 Identities=17% Similarity=0.049 Sum_probs=55.1
Q ss_pred CCCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC----CCCCCCCC-ccEEEecccc
Q 025363 94 GFKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG----DMFKSIPA-ADAIFMKWVL 166 (254)
Q Consensus 94 ~~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~----d~~~~~p~-~D~v~~~~vl 166 (254)
...++.+||-+|+| .|..+..+++.. +.+ +++.+. ++-.+.+++..--.++.. |+.+.+.. .|+|+-.-.-
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~-Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~ 253 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAM-GAE-TYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASS 253 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHH-TCE-EEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCE-EEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCC
Confidence 46778999999965 588888888876 457 888885 544433332211112211 21111222 3888753321
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 167 TTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 167 h~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
- + ...++.+.++|+|||+++..-.
T Consensus 254 ~--~----~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 254 L--T----DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp S--T----TCCTTTGGGGEEEEEEEEECCC
T ss_pred C--c----HHHHHHHHHHhcCCCEEEEecC
Confidence 0 0 0224566788999999987654
No 387
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=65.19 E-value=8.2 Score=31.83 Aligned_cols=92 Identities=13% Similarity=0.039 Sum_probs=55.8
Q ss_pred CCCCCCeEEEecC--cccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCC---CC----CC-c-cEEE
Q 025363 94 GFKGVKRLVDVGG--SAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK---SI----PA-A-DAIF 161 (254)
Q Consensus 94 ~~~~~~~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~---~~----p~-~-D~v~ 161 (254)
..+++.+||-.|+ |.|..+..+++.. +.+ +++.+. ++-.+.+++...-.....+-.+ .+ .. . |+++
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~-Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi 244 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAY-GLK-ILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIII 244 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHT-TCE-EEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHC-CCE-EEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEE
Confidence 4677889999995 6788888888875 457 888886 5544444332111122111111 00 11 2 7776
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
-.-. . ..+....++|+|+|++++.-.
T Consensus 245 ~~~G------~---~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 245 EMLA------N---VNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp ESCH------H---HHHHHHHHHEEEEEEEEECCC
T ss_pred ECCC------h---HHHHHHHHhccCCCEEEEEec
Confidence 4321 1 246788899999999988653
No 388
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=64.78 E-value=1.8 Score=35.34 Aligned_cols=94 Identities=11% Similarity=-0.035 Sum_probs=56.2
Q ss_pred hhcCCCCCCCeEEEec--CcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeCCCCC----CCCCccEEEec
Q 025363 90 EGYNGFKGVKRLVDVG--GSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGGDMFK----SIPAADAIFMK 163 (254)
Q Consensus 90 ~~~~~~~~~~~vlDvG--~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~----~~p~~D~v~~~ 163 (254)
+.. ...++.+||=+| ||.|..+..+++.. +.+ +++.+.++-.+.+++..--.++..+-.+ .....|+|+-.
T Consensus 146 ~~~-~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~-vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~ 222 (321)
T 3tqh_A 146 NQA-EVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTT-VITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDL 222 (321)
T ss_dssp HHT-TCCTTCEEEESSTTSHHHHHHHHHHHHT-TCE-EEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEES
T ss_pred Hhc-CCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCE-EEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEEC
Confidence 444 477889999986 56789999999886 457 8777764434444332111122111111 12223877642
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 164 WVLTTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
- .. ..+..+.++|+|+|+++..-
T Consensus 223 ~-----g~----~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 223 V-----GG----DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp S-----CH----HHHHHHGGGEEEEEEEEECC
T ss_pred C-----Cc----HHHHHHHHhccCCCEEEEeC
Confidence 2 22 22378889999999998753
No 389
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=64.77 E-value=1.6 Score=39.88 Aligned_cols=88 Identities=19% Similarity=0.290 Sum_probs=0.0
Q ss_pred eEEEecCcccHHHHHHHHHcCC------------CCeEEEeec-hHHHhhCCC---------------------------
Q 025363 100 RLVDVGGSAGDCLRMILQKHRF------------ICEGINFDL-PEVVAEAPS--------------------------- 139 (254)
Q Consensus 100 ~vlDvG~G~G~~~~~l~~~~~~------------~~~~~~~D~-~~~~~~~~~--------------------------- 139 (254)
+|+|+|-|+|......++.+.. +. ++.++. |-..+..++
T Consensus 61 ~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~-~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 139 (689)
T 3pvc_A 61 IFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLH-YISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGCH 139 (689)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEE-EEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEE
T ss_pred EEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEE-EEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCce
Q ss_pred -------CCCcEEEeCCCCCCCC------Cc--cEEEe-----ccccccCCHHHHHHHHHHHHHhCCCCCEEE
Q 025363 140 -------IPGVTHIGGDMFKSIP------AA--DAIFM-----KWVLTTWTDDECKLIMENCYKALPAGGKLI 192 (254)
Q Consensus 140 -------~~~i~~~~~d~~~~~p------~~--D~v~~-----~~vlh~~~~~~~~~il~~~~~~L~pgG~l~ 192 (254)
.-++++..||+.+.++ .. |++++ ..-=..|+. .+++.+.++++|||.+.
T Consensus 140 r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~----~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 140 RILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNE----QLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSH----HHHHHHHHHEEEEEEEE
T ss_pred EEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhH----HHHHHHHHHhCCCCEEE
No 390
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=64.75 E-value=9.1 Score=31.08 Aligned_cols=93 Identities=12% Similarity=0.002 Sum_probs=57.6
Q ss_pred CCCCCCeEEEec--CcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCC---CCCC----CC-Cc-cEEE
Q 025363 94 GFKGVKRLVDVG--GSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGD---MFKS----IP-AA-DAIF 161 (254)
Q Consensus 94 ~~~~~~~vlDvG--~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d---~~~~----~p-~~-D~v~ 161 (254)
..+++.+||-+| ||.|..+..+++.. +.+ +++.+. ++-++.+++...-..+..+ +.+. .+ .. |+++
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~-Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvi 214 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKAL-GAK-LIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVY 214 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH-TCE-EEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEE
Confidence 467889999998 46788888888876 457 888886 5555544432211122111 1111 11 12 7777
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
-.-. . ..++.+.+.|+|||++++.-..
T Consensus 215 d~~g-----~----~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 215 DGVG-----Q----DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp ESSC-----G----GGHHHHHTTEEEEEEEEECCCT
T ss_pred ECCC-----h----HHHHHHHHHhcCCCEEEEEecC
Confidence 5322 1 3467888999999999987654
No 391
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=64.73 E-value=6.4 Score=32.24 Aligned_cols=97 Identities=11% Similarity=0.057 Sum_probs=55.9
Q ss_pred HhhcCCCCCCCeEEEecCc--ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC---CCCCC----CCC-c
Q 025363 89 LEGYNGFKGVKRLVDVGGS--AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG---DMFKS----IPA-A 157 (254)
Q Consensus 89 ~~~~~~~~~~~~vlDvG~G--~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~---d~~~~----~p~-~ 157 (254)
.+.. ..+++.+||-+|+| .|..+..+++.. +++ +++.+. ++-.+.+++..--..+.. |+.+. .+. .
T Consensus 137 ~~~~-~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~-Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 137 TETL-NLQRNDVLLVNACGSAIGHLFAQLSQIL-NFR-LIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp HTTS-CCCTTCEEEESSTTSHHHHHHHHHHHHH-TCE-EEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred HHhc-ccCCCCEEEEeCCccHHHHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCC
Confidence 3444 47788999999875 788888888876 457 888886 443333332211111111 11111 111 3
Q ss_pred -cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 158 -DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 158 -D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
|+++-.- .... +....++|+|||++++.-..
T Consensus 214 ~Dvvid~~-----g~~~----~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 214 ADAAIDSI-----GGPD----GNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp EEEEEESS-----CHHH----HHHHHHTEEEEEEEEECCCT
T ss_pred CcEEEECC-----CChh----HHHHHHHhcCCCEEEEEeec
Confidence 8776522 2222 23344799999999987654
No 392
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=64.50 E-value=2.1 Score=34.49 Aligned_cols=90 Identities=12% Similarity=0.059 Sum_probs=54.2
Q ss_pred CCCCCeEEEecC--cccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC----CCCCCCCCccEEEeccccc
Q 025363 95 FKGVKRLVDVGG--SAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG----DMFKSIPAADAIFMKWVLT 167 (254)
Q Consensus 95 ~~~~~~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~----d~~~~~p~~D~v~~~~vlh 167 (254)
.+++.+||-+|+ |.|..+..+++.. +.+ +++.+. ++-.+.+++..--..+.. |+.+.+...|+++- -.-
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~-Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~- 198 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLR-VLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG- 198 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCE-EEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-
Confidence 567889999996 6788888888876 457 888887 554443332211111111 11111222388775 221
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
..++.+.++|+|+|+++..-.
T Consensus 199 --------~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 199 --------KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp --------TTHHHHHTTEEEEEEEEEC--
T ss_pred --------HHHHHHHHhhccCCEEEEEeC
Confidence 246788899999999987654
No 393
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=64.39 E-value=9.4 Score=31.29 Aligned_cols=98 Identities=12% Similarity=0.034 Sum_probs=57.9
Q ss_pred CCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------------------------CCcEEEeCCCC
Q 025363 97 GVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------------------------PGVTHIGGDMF 151 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------------------------~~i~~~~~d~~ 151 (254)
...+|.=||+|+=...++..-...+.. ++++|. ++.++.+.+. .+|++. .|+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~-V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~l~ 82 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFR-VKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLA 82 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCC-EEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cchH
Confidence 356899999985444444433445778 999998 6655443211 234432 2222
Q ss_pred CCCCCccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccccC
Q 025363 152 KSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 199 (254)
Q Consensus 152 ~~~p~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~ 199 (254)
+.+.++|+|+= .+..++ +--.++++++-+.++|+..|......++
T Consensus 83 ~a~~~ad~ViE-av~E~l--~iK~~lf~~l~~~~~~~aIlaSNTSsl~ 127 (319)
T 3ado_A 83 EAVEGVVHIQE-CVPENL--DLKRKIFAQLDSIVDDRVVLSSSSSCLL 127 (319)
T ss_dssp HHTTTEEEEEE-CCCSCH--HHHHHHHHHHHTTCCSSSEEEECCSSCC
T ss_pred hHhccCcEEee-ccccHH--HHHHHHHHHHHHHhhhcceeehhhhhcc
Confidence 22334476653 344443 4457899999999999988776555443
No 394
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=63.32 E-value=21 Score=30.92 Aligned_cols=94 Identities=19% Similarity=0.102 Sum_probs=53.3
Q ss_pred CeEEEecCccc--HHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-C-----------------CcEEEeCCCCCCCCCc
Q 025363 99 KRLVDVGGSAG--DCLRMILQKHRFICEGINFDL-PEVVAEAPSI-P-----------------GVTHIGGDMFKSIPAA 157 (254)
Q Consensus 99 ~~vlDvG~G~G--~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~-----------------~i~~~~~d~~~~~p~~ 157 (254)
++|.=||+|.= .++..|+++.++.+ ++++|. ++.++..++. . ++.+ ..|..+...++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~-V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~~~a 87 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHIT-VTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAIAEA 87 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSE-EEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCE-EEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHhhcC
Confidence 58889998843 34555666655667 999998 7766665432 1 1221 11111112235
Q ss_pred cEEEecc--ccc--------cCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 158 DAIFMKW--VLT--------TWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 158 D~v~~~~--vlh--------~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
|+|++.- -.+ ...-.....+++.+.+.|+||.. ++..
T Consensus 88 Dvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~i-VV~~ 134 (481)
T 2o3j_A 88 DLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKI-VVEK 134 (481)
T ss_dssp SEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEE-EEEC
T ss_pred CEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCE-EEEC
Confidence 8888752 222 11112467788899999988654 4443
No 395
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=62.99 E-value=43 Score=26.13 Aligned_cols=94 Identities=15% Similarity=-0.009 Sum_probs=50.5
Q ss_pred eEEEecCcccHHHHHHHHHc---CCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC--C----CCccEEEeccccccC
Q 025363 100 RLVDVGGSAGDCLRMILQKH---RFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--I----PAADAIFMKWVLTTW 169 (254)
Q Consensus 100 ~vlDvG~G~G~~~~~l~~~~---~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~--~----p~~D~v~~~~vlh~~ 169 (254)
+||=.| |+|..+..+++.+ ++.+ +++++. ++-..... ..+++++.+|+.+. + ...|+|+.......
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~~~~g~~-V~~~~R~~~~~~~~~-~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~- 77 (289)
T 3e48_A 2 NIMLTG-ATGHLGTHITNQAIANHIDH-FHIGVRNVEKVPDDW-RGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIH- 77 (289)
T ss_dssp CEEEET-TTSHHHHHHHHHHHHTTCTT-EEEEESSGGGSCGGG-BTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCC-
T ss_pred EEEEEc-CCchHHHHHHHHHhhCCCCc-EEEEECCHHHHHHhh-hCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc-
Confidence 455454 5666666666554 3567 888877 44222211 26799999999775 2 22388775433221
Q ss_pred CHHHHHHHHHHHHHhCCC-C-CEEEEEccc
Q 025363 170 TDDECKLIMENCYKALPA-G-GKLIACEPV 197 (254)
Q Consensus 170 ~~~~~~~il~~~~~~L~p-g-G~l~i~d~~ 197 (254)
.........+++.++++. | ++++.....
T Consensus 78 ~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~ 107 (289)
T 3e48_A 78 PSFKRIPEVENLVYAAKQSGVAHIIFIGYY 107 (289)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred cchhhHHHHHHHHHHHHHcCCCEEEEEccc
Confidence 122223333444444432 3 467766554
No 396
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=62.94 E-value=32 Score=27.26 Aligned_cols=87 Identities=11% Similarity=-0.020 Sum_probs=48.8
Q ss_pred CeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEe--------C---CCCCCCC---CccEEE
Q 025363 99 KRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIG--------G---DMFKSIP---AADAIF 161 (254)
Q Consensus 99 ~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~--------~---d~~~~~p---~~D~v~ 161 (254)
++|.=||+|. |. ++..|++. +.+ ++++|. ++..+..++. .+.... . +..+... .+|+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~--g~~-V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG--GND-VTLIDQWPAHIEAIRKN-GLIADFNGEEVVANLPIFSPEEIDHQNEQVDLII 79 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCE-EEEECSCHHHHHHHHHH-CEEEEETTEEEEECCCEECGGGCCTTSCCCSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCc-EEEEECCHHHHHHHHhC-CEEEEeCCCeeEecceeecchhhcccCCCCCEEE
Confidence 4788888863 22 23333333 346 888888 6555443321 122211 0 1101112 459888
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
+.- +......+++.+...++|+..++..
T Consensus 80 ~~v-----~~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 80 ALT-----KAQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp ECS-----CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EEe-----ccccHHHHHHHHHHhcCCCCEEEEe
Confidence 743 3455678899999999988766654
No 397
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=62.07 E-value=21 Score=29.14 Aligned_cols=94 Identities=14% Similarity=0.101 Sum_probs=49.7
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCC-CeEEEeec-hHHHhhC----CC-----CCCcEEEe-CCCCCCCCCccEEEeccc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFI-CEGINFDL-PEVVAEA----PS-----IPGVTHIG-GDMFKSIPAADAIFMKWV 165 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~-~~~~~~D~-~~~~~~~----~~-----~~~i~~~~-~d~~~~~p~~D~v~~~~v 165 (254)
..+|.=||+|+=..+...+-...+. . ++++|+ ++.++.. .. ....++.. .|. +.+.++|+|+..--
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG 81 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 4578889986433333322222344 6 888997 4333211 11 01233333 555 55667799887641
Q ss_pred cc-c--CC----------H---HHHHHHHHHHHHhCCCCCEEEEE
Q 025363 166 LT-T--WT----------D---DECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 166 lh-~--~~----------~---~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
.- . .+ . +-..++.+++.+.. |++++++.
T Consensus 82 ~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 125 (322)
T 1t2d_A 82 FTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVV 125 (322)
T ss_dssp CSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred CCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 11 0 00 0 12456666777765 89998874
No 398
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=61.89 E-value=3.3 Score=34.28 Aligned_cols=27 Identities=19% Similarity=0.286 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 172 DECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 172 ~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
++....|..+.++|+|||+|+|+.+..
T Consensus 251 ~~L~~~L~~a~~~L~~gGRl~VISFHS 277 (347)
T 3tka_A 251 EEIEQALKSSLNVLAPGGRLSIISFHS 277 (347)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEESSH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 456778999999999999999987643
No 399
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=61.80 E-value=3.4 Score=33.29 Aligned_cols=27 Identities=22% Similarity=0.341 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 172 DECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 172 ~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
+.....|..+.++|+|||+|+|+.+..
T Consensus 210 ~~L~~~L~~a~~~L~~gGrl~visfHS 236 (285)
T 1wg8_A 210 NALKEFLEQAAEVLAPGGRLVVIAFHS 236 (285)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECSH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCc
Confidence 467789999999999999999987654
No 400
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=61.67 E-value=6.8 Score=31.84 Aligned_cols=91 Identities=10% Similarity=-0.040 Sum_probs=56.0
Q ss_pred CCCCCCeEEEec--CcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC---------C-CCc-cE
Q 025363 94 GFKGVKRLVDVG--GSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS---------I-PAA-DA 159 (254)
Q Consensus 94 ~~~~~~~vlDvG--~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~---------~-p~~-D~ 159 (254)
...++.+||-.| +|.|..+..+++.. +.+ +++.+. ++-.+.+++...-... |..+. . ... |+
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~-V~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~D~ 212 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKAL-GAK-LIGTVGTAQKAQSALKAGAWQVI--NYREEDLVERLKEITGGKKVRV 212 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHH-TCE-EEEEESSHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHHcCCCEEE--ECCCccHHHHHHHHhCCCCceE
Confidence 467789999999 56788888888776 457 888887 5444443322111111 21111 0 112 77
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 160 IFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 160 v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
++-.-. ...++.+.++|+++|++++.-..
T Consensus 213 vi~~~g---------~~~~~~~~~~l~~~G~iv~~g~~ 241 (327)
T 1qor_A 213 VYDSVG---------RDTWERSLDCLQRRGLMVSFGNS 241 (327)
T ss_dssp EEECSC---------GGGHHHHHHTEEEEEEEEECCCT
T ss_pred EEECCc---------hHHHHHHHHHhcCCCEEEEEecC
Confidence 765332 13467888999999999886543
No 401
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=61.26 E-value=11 Score=30.06 Aligned_cols=88 Identities=13% Similarity=0.072 Sum_probs=49.7
Q ss_pred CeEEEecCcccH--HHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------------------------CCcEEEeCCCC
Q 025363 99 KRLVDVGGSAGD--CLRMILQKHRFICEGINFDL-PEVVAEAPSI------------------------PGVTHIGGDMF 151 (254)
Q Consensus 99 ~~vlDvG~G~G~--~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------------------------~~i~~~~~d~~ 151 (254)
.+|.=||+|.=. .+..++++ +.+ ++++|. ++.++.+.+. .++.+ ..|..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~--G~~-V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH--GFA-VTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCE-EEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCe-EEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 477788876422 22223332 557 999998 6655443321 12333 22222
Q ss_pred CCCCCccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 152 KSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 152 ~~~p~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
+...++|+|+..-.-. .+....+++++.+.++|+..++-
T Consensus 81 ~~~~~aDlVi~av~~~---~~~~~~v~~~l~~~~~~~~il~s 119 (283)
T 4e12_A 81 QAVKDADLVIEAVPES---LDLKRDIYTKLGELAPAKTIFAT 119 (283)
T ss_dssp HHTTTCSEEEECCCSC---HHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HHhccCCEEEEeccCc---HHHHHHHHHHHHhhCCCCcEEEE
Confidence 2244569988754221 23556788999999999876543
No 402
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=61.15 E-value=11 Score=31.74 Aligned_cols=102 Identities=11% Similarity=0.017 Sum_probs=58.3
Q ss_pred HHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEE-Eeec-hHHHhhCCCCCCcEEEeCCCCCCCCCc-cEEE
Q 025363 85 MTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGI-NFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAA-DAIF 161 (254)
Q Consensus 85 ~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~-~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~-D~v~ 161 (254)
.+-+++.+.. ...+||.++-+.|.++..+... .+ ++ +.|. +......+ ..+.....+-.+..|.. |+|+
T Consensus 35 ~~~l~~~~~~--~~~~~l~~n~~~g~~~~~~~~~---~~-~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~d~v~ 106 (381)
T 3dmg_A 35 HDLLQKTVEP--FGERALDLNPGVGWGSLPLEGR---MA-VERLETSRAAFRCLTA--SGLQARLALPWEAAAGAYDLVV 106 (381)
T ss_dssp HHHHHTTCCC--CSSEEEESSCTTSTTTGGGBTT---BE-EEEEECBHHHHHHHHH--TTCCCEECCGGGSCTTCEEEEE
T ss_pred HHHHHHHHHH--hCCcEEEecCCCCccccccCCC---Cc-eEEEeCcHHHHHHHHH--cCCCccccCCccCCcCCCCEEE
Confidence 3445555532 3468999999999887766422 23 43 3455 54433221 22222222222233443 8888
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
+..-=+- ....+...|.++.+.|+|||.|++.-
T Consensus 107 ~~~Pk~k-~~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 107 LALPAGR-GTAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp EECCGGG-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcch-hHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 7432110 11357789999999999999988764
No 403
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=60.62 E-value=4.5 Score=36.75 Aligned_cols=92 Identities=17% Similarity=0.139 Sum_probs=0.0
Q ss_pred eEEEecCcccHHHHHHHHHc------------CCCCeEEEeec----hHHHhhCCCC-----------------------
Q 025363 100 RLVDVGGSAGDCLRMILQKH------------RFICEGINFDL----PEVVAEAPSI----------------------- 140 (254)
Q Consensus 100 ~vlDvG~G~G~~~~~l~~~~------------~~~~~~~~~D~----~~~~~~~~~~----------------------- 140 (254)
+|+|+|-|+|......++.+ ..+. ++.++. ++.+..+...
T Consensus 69 ~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~-~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 69 VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLH-FISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEE-EEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred EEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEE-EEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Q ss_pred --------CCcEEEeCCCCCCCC------Cc--cEEEeccccccCCHHH-HHHHHHHHHHhCCCCCEEE
Q 025363 141 --------PGVTHIGGDMFKSIP------AA--DAIFMKWVLTTWTDDE-CKLIMENCYKALPAGGKLI 192 (254)
Q Consensus 141 --------~~i~~~~~d~~~~~p------~~--D~v~~~~vlh~~~~~~-~~~il~~~~~~L~pgG~l~ 192 (254)
-++++.-+|+.+.++ .. |++++--.--.-+++- ...+++.++++++|||.+.
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 216 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLA 216 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEE
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEE
No 404
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=60.60 E-value=40 Score=23.57 Aligned_cols=88 Identities=14% Similarity=0.043 Sum_probs=49.6
Q ss_pred CCeEEEecCcccHHHHHHHHHc--CCCCeEEEeec-h-HHHhhCCC--CCCcEEEeCCCCCC--C-----CCccEEEecc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKH--RFICEGINFDL-P-EVVAEAPS--IPGVTHIGGDMFKS--I-----PAADAIFMKW 164 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~--~~~~~~~~~D~-~-~~~~~~~~--~~~i~~~~~d~~~~--~-----p~~D~v~~~~ 164 (254)
..+|+=+|+ |..+..+++.. .+.+ ++++|. + +..+.... ...+.++.+|..+. + ..+|++++.-
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~-V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQN-VTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCC-EEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCC-EEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 346777775 55555555443 2456 888887 4 32222111 14588899998764 1 2348777643
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 165 VLTTWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 165 vlh~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
++++....+....+.+.|..+++.
T Consensus 80 -----~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 80 -----DNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp -----SCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred -----CChHHHHHHHHHHHHHCCCCEEEE
Confidence 223333445555666677777665
No 405
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=60.29 E-value=11 Score=31.18 Aligned_cols=87 Identities=11% Similarity=0.015 Sum_probs=52.6
Q ss_pred CeEEEecCc-ccHHH-HHHH-HHcCCCCeEEEeec-hH---HHhhCCCCCCcEEEeCCCCCC-C-------CCccEEEec
Q 025363 99 KRLVDVGGS-AGDCL-RMIL-QKHRFICEGINFDL-PE---VVAEAPSIPGVTHIGGDMFKS-I-------PAADAIFMK 163 (254)
Q Consensus 99 ~~vlDvG~G-~G~~~-~~l~-~~~~~~~~~~~~D~-~~---~~~~~~~~~~i~~~~~d~~~~-~-------p~~D~v~~~ 163 (254)
.+||-+|+| .|.++ ..++ +....-+ +++++. ++ -.+.+++. ..+.+ |..+. + ...|+|+-.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~-Vi~~~~~~~~~~~~~~~~~l-Ga~~v--~~~~~~~~~i~~~~gg~Dvvid~ 249 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYEN-LYCLGRRDRPDPTIDIIEEL-DATYV--DSRQTPVEDVPDVYEQMDFIYEA 249 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCE-EEEEECCCSSCHHHHHHHHT-TCEEE--ETTTSCGGGHHHHSCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcE-EEEEeCCcccHHHHHHHHHc-CCccc--CCCccCHHHHHHhCCCCCEEEEC
Confidence 899999964 57788 8888 7654334 778887 44 44444432 22222 32221 1 112777642
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 164 WVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
-. . ...++.+.++|+|+|++++.-..
T Consensus 250 ~g-----~---~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 250 TG-----F---PKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp SC-----C---HHHHHHHHHHEEEEEEEEECCCC
T ss_pred CC-----C---hHHHHHHHHHHhcCCEEEEEeCC
Confidence 21 1 23578888999999999887543
No 406
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=60.14 E-value=4.7 Score=28.54 Aligned_cols=19 Identities=26% Similarity=0.380 Sum_probs=17.5
Q ss_pred HHHHHHHHHhCCCCCEEEE
Q 025363 175 KLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 175 ~~il~~~~~~L~pgG~l~i 193 (254)
.++++.+.++|||||+|.-
T Consensus 78 r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 78 KKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp HHHHHHHHTTCCTTCCEEC
T ss_pred HHHHHHHHHHhCCCCEEEe
Confidence 6899999999999999876
No 407
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=60.05 E-value=8.8 Score=32.51 Aligned_cols=39 Identities=21% Similarity=0.186 Sum_probs=27.8
Q ss_pred CCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhC
Q 025363 97 GVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEA 137 (254)
Q Consensus 97 ~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~ 137 (254)
++.+|+=+|+| .|..+..+++.+. .+ ++++|. +...+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~-V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG-AI-VRAFDTRPEVKEQV 211 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CE-EEEECSCGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CE-EEEEcCCHHHHHHH
Confidence 36789999976 5666677777765 57 999998 6554444
No 408
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=59.07 E-value=11 Score=31.02 Aligned_cols=93 Identities=12% Similarity=-0.003 Sum_probs=56.7
Q ss_pred CCCCCCeEEEec--CcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCC---CCCCC----CCc-cEEEe
Q 025363 94 GFKGVKRLVDVG--GSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGD---MFKSI----PAA-DAIFM 162 (254)
Q Consensus 94 ~~~~~~~vlDvG--~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d---~~~~~----p~~-D~v~~ 162 (254)
..+++.+||-+| +|.|..+..+++.. +.+ +++.+. ++-.+.+++...-..+..+ +.+.+ +.. |+++-
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~-Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid 241 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAF-GAE-VYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILD 241 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCE-EEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEE
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEE
Confidence 467889999995 46788888888876 457 998886 6555544432111122111 10001 122 77775
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 163 KWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 163 ~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
.-. . ..++.+.+.|+|+|++++.-..
T Consensus 242 ~~g-----~----~~~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 242 MIG-----A----AYFERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp SCC-----G----GGHHHHHHTEEEEEEEEECCCT
T ss_pred CCC-----H----HHHHHHHHHhccCCEEEEEEec
Confidence 322 1 2467788899999999886543
No 409
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=57.59 E-value=10 Score=33.16 Aligned_cols=88 Identities=16% Similarity=0.041 Sum_probs=51.7
Q ss_pred CCCCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHH
Q 025363 95 FKGVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDD 172 (254)
Q Consensus 95 ~~~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~ 172 (254)
...+.+|+=+|+| .|......++.+ +.+ ++++|. +.-.+.+... .+.+ .++.+.+..+|+|+..---.+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~-Viv~d~~~~~~~~A~~~-Ga~~--~~l~e~l~~aDvVi~atgt~~---- 341 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GAR-VSVTEIDPINALQAMME-GFDV--VTVEEAIGDADIVVTATGNKD---- 341 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCE-EEEECSCHHHHHHHHHT-TCEE--CCHHHHGGGCSEEEECSSSSC----
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHHHHc-CCEE--ecHHHHHhCCCEEEECCCCHH----
Confidence 3467899999975 566666666665 457 999998 5544443322 2332 122111444699887432211
Q ss_pred HHHHHH-HHHHHhCCCCCEEEEEc
Q 025363 173 ECKLIM-ENCYKALPAGGKLIACE 195 (254)
Q Consensus 173 ~~~~il-~~~~~~L~pgG~l~i~d 195 (254)
++ ++..+.|||||+|+..-
T Consensus 342 ----~i~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 342 ----IIMLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp ----SBCHHHHHHSCTTCEEEECS
T ss_pred ----HHHHHHHHhcCCCcEEEEeC
Confidence 12 25566799999987654
No 410
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=57.36 E-value=30 Score=30.06 Aligned_cols=146 Identities=12% Similarity=0.092 Sum_probs=75.8
Q ss_pred CeEEEecCcc--cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC-----------C------------CCcEEEeCCCCC
Q 025363 99 KRLVDVGGSA--GDCLRMILQKHRFICEGINFDL-PEVVAEAPS-----------I------------PGVTHIGGDMFK 152 (254)
Q Consensus 99 ~~vlDvG~G~--G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~-----------~------------~~i~~~~~d~~~ 152 (254)
.+|.=||+|. +..+..++++ +.. ++++|. ++.++.+.+ . .++++. .|. +
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a--G~~-V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~-~ 80 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH--GHQ-VLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDI-H 80 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCC-EEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCG-G
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCe-EEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCH-H
Confidence 4677788874 3334444444 567 999998 666555321 1 134443 233 2
Q ss_pred CCCCccEEEeccccccCCHH-HHHHHHHHHHHhCCCCCEEEEEccccCCC-----CCChhhhhhcccch-Hh--hhhccc
Q 025363 153 SIPAADAIFMKWVLTTWTDD-ECKLIMENCYKALPAGGKLIACEPVLPDD-----SNESQRTRALLEGD-IF--VMTIYR 223 (254)
Q Consensus 153 ~~p~~D~v~~~~vlh~~~~~-~~~~il~~~~~~L~pgG~l~i~d~~~~~~-----~~~~~~~~~~~~~~-~~--~~~~~~ 223 (254)
.+.++|+|+..-. ++. -...+++++.+.++|+..|+.....++.. ...+........++ .. .+. ..
T Consensus 81 ~~~~aDlVIeAVp----e~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~~Lv-ev 155 (483)
T 3mog_A 81 ALAAADLVIEAAS----ERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLV-EV 155 (483)
T ss_dssp GGGGCSEEEECCC----CCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTCCEE-EE
T ss_pred HhcCCCEEEEcCC----CcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhCCeE-EE
Confidence 3445699887432 222 33578999999999887665433222211 00000000001111 00 000 01
Q ss_pred cCc---eecCHHHHHHHHHhCCCCeeeEEEccCC
Q 025363 224 AKG---NHRTEQEFKQLGFFAGFPHLRLYRVLDY 254 (254)
Q Consensus 224 ~~~---~~~t~~e~~~ll~~aGf~~~~~~~~~~~ 254 (254)
..+ ..-+.+...+++++-|-+.+.+.+.+|+
T Consensus 156 v~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~Gf 189 (483)
T 3mog_A 156 VSGLATAAEVVEQLCELTLSWGKQPVRCHSTPGF 189 (483)
T ss_dssp EECSSCCHHHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred ecCCCCCHHHHHHHHHHHHHhCCEEEEEeccCcc
Confidence 112 1224567788999999888888777664
No 411
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=56.54 E-value=16 Score=29.74 Aligned_cols=50 Identities=16% Similarity=0.142 Sum_probs=37.6
Q ss_pred hHHHHHhhcCCCCCCCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-h---HHHhhCC
Q 025363 84 FMTSVLEGYNGFKGVKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-P---EVVAEAP 138 (254)
Q Consensus 84 ~~~~i~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~---~~~~~~~ 138 (254)
+++.+++.+ -.++..|||-=||+|..+.+..+. +-+ .+++|+ + ...+.++
T Consensus 231 l~~~~i~~~--~~~~~~vlDpF~GsGtt~~aa~~~--~r~-~ig~e~~~~~~~~~~~~~ 284 (319)
T 1eg2_A 231 VIERLVRAL--SHPGSTVLDFFAGSGVTARVAIQE--GRN-SICTDAAPVFKEYYQKQL 284 (319)
T ss_dssp HHHHHHHHH--SCTTCEEEETTCTTCHHHHHHHHH--TCE-EEEEESSTHHHHHHHHHH
T ss_pred HHHHHHHHh--CCCCCEEEecCCCCCHHHHHHHHc--CCc-EEEEECCccHHHHHHHHH
Confidence 455566655 356789999999999999998887 445 999999 6 6665544
No 412
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=56.28 E-value=20 Score=30.62 Aligned_cols=92 Identities=14% Similarity=0.105 Sum_probs=55.7
Q ss_pred CCCCCCeEEEecC--cccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEe---CCCC----------------
Q 025363 94 GFKGVKRLVDVGG--SAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIG---GDMF---------------- 151 (254)
Q Consensus 94 ~~~~~~~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~---~d~~---------------- 151 (254)
..+++.+||=+|+ |.|.++..+++.. +.+ +++++. ++-++.+++..--.++. .|+.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~-vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG-GAN-PICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT-TCE-EEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCe-EEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHH
Confidence 3677889999985 6788999999876 456 777765 55555443321111111 1110
Q ss_pred -CC----CC-Cc-cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 152 -KS----IP-AA-DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 152 -~~----~p-~~-D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
+. .+ .. |+|+-.- .. ..++.+.++|+|||+++++-.
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~-----G~----~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHP-----GR----ETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECS-----CH----HHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHHHHhCCCCCcEEEEcC-----Cc----hhHHHHHHHhhCCcEEEEEec
Confidence 00 11 12 7776422 11 457888899999999998654
No 413
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=56.27 E-value=4.5 Score=32.57 Aligned_cols=55 Identities=18% Similarity=0.251 Sum_probs=32.7
Q ss_pred CcEEE-eCCCCCC-C-CCccEEEec----cccccCC---HHH--HHHHHHHHHHhCCCCCEEEEEcc
Q 025363 142 GVTHI-GGDMFKS-I-PAADAIFMK----WVLTTWT---DDE--CKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 142 ~i~~~-~~d~~~~-~-p~~D~v~~~----~vlh~~~---~~~--~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
...+. .+|+..+ . +.+|+|++. ..-|++. |.. ..-+++.+.+.|+|||.+++--.
T Consensus 189 GAt~~~~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvy 255 (320)
T 2hwk_A 189 EATFRARLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGY 255 (320)
T ss_dssp TCSEECCGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEEC
T ss_pred CceeecccccCCccccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEe
Confidence 34455 6777766 2 335999973 3334321 111 11256677789999999988543
No 414
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=56.17 E-value=29 Score=27.71 Aligned_cols=88 Identities=15% Similarity=0.149 Sum_probs=48.6
Q ss_pred CCeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHHH
Q 025363 98 VKRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDEC 174 (254)
Q Consensus 98 ~~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~ 174 (254)
..+|.=||+|. |. ++..|++. +.+ ++++|. ++..+...+.. +.....|..+-...+|+|++.-- ++...
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~--G~~-V~~~dr~~~~~~~~~~~g-~~~~~~~~~e~~~~aDvvi~~vp----~~~~~ 78 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA--GLS-TWGADLNPQACANLLAEG-ACGAAASAREFAGVVDALVILVV----NAAQV 78 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCE-EEEECSCHHHHHHHHHTT-CSEEESSSTTTTTTCSEEEECCS----SHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCe-EEEEECCHHHHHHHHHcC-CccccCCHHHHHhcCCEEEEECC----CHHHH
Confidence 35788887763 22 23333333 456 899998 66555543322 22223344333455699887432 12345
Q ss_pred HHHH---HHHHHhCCCCCEEEE
Q 025363 175 KLIM---ENCYKALPAGGKLIA 193 (254)
Q Consensus 175 ~~il---~~~~~~L~pgG~l~i 193 (254)
..++ +.+...++||..++-
T Consensus 79 ~~v~~~~~~l~~~l~~g~ivv~ 100 (303)
T 3g0o_A 79 RQVLFGEDGVAHLMKPGSAVMV 100 (303)
T ss_dssp HHHHC--CCCGGGSCTTCEEEE
T ss_pred HHHHhChhhHHhhCCCCCEEEe
Confidence 5565 667788888776543
No 415
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=56.03 E-value=82 Score=26.99 Aligned_cols=88 Identities=14% Similarity=0.114 Sum_probs=50.2
Q ss_pred CCeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCC---------------------CCCcEEEeCCCCCC
Q 025363 98 VKRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPS---------------------IPGVTHIGGDMFKS 153 (254)
Q Consensus 98 ~~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~---------------------~~~i~~~~~d~~~~ 153 (254)
..+|.=||+|. |. .+..+++ .+.. ++++|. ++.++.+.. .....+ ..|. +.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~--~G~~-V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~ 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR--VGIS-VVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KE 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCE-EEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GG
T ss_pred CCEEEEECcCHHHHHHHHHHHh--CCCe-EEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HH
Confidence 45788999886 22 3333333 3557 899998 554443221 011222 4444 33
Q ss_pred CCCccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 154 IPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 154 ~p~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
+.++|+|+..-. . ..+-...+++++...++|+..|+.
T Consensus 112 ~~~aDlVIeaVp-e--~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 LSTVDLVVEAVF-E--DMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp GTTCSEEEECCC-S--CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HCCCCEEEEcCC-C--CHHHHHHHHHHHHhhCCCCeEEEe
Confidence 455699887542 1 112345788899999998876543
No 416
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=55.74 E-value=21 Score=30.71 Aligned_cols=95 Identities=13% Similarity=-0.019 Sum_probs=49.1
Q ss_pred CeEEEecCcccH--HHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------------------CCcEEEeCCCCCCCCC
Q 025363 99 KRLVDVGGSAGD--CLRMILQKHRFICEGINFDL-PEVVAEAPSI-------------------PGVTHIGGDMFKSIPA 156 (254)
Q Consensus 99 ~~vlDvG~G~G~--~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------------------~~i~~~~~d~~~~~p~ 156 (254)
++|.=||+|.=. ++..|+++ +.+ ++++|. ++.++...+. .++.+. .|..+...+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~-V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea~~~ 78 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GAN-VRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQAVPE 78 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCE-EEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHHGGG
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCE-EEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHHHhc
Confidence 467778776322 22333333 446 899998 6555443221 123321 122111334
Q ss_pred ccEEEecccccc-----CCHHHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 157 ADAIFMKWVLTT-----WTDDECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 157 ~D~v~~~~vlh~-----~~~~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
+|+|++.---.. -+-.....+++.+.+.|++|. +++.....
T Consensus 79 aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~-iVV~~STv 124 (450)
T 3gg2_A 79 ADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYI-LIVTKSTV 124 (450)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCE-EEEECSCC
T ss_pred CCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCC-EEEEeeeC
Confidence 588886432110 001256788899999998764 44544443
No 417
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=55.39 E-value=59 Score=28.17 Aligned_cols=125 Identities=14% Similarity=0.071 Sum_probs=65.9
Q ss_pred CCeEEEec-CcccHH-HHHHHHHcCCCCeEEEeec--hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHH
Q 025363 98 VKRLVDVG-GSAGDC-LRMILQKHRFICEGINFDL--PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDE 173 (254)
Q Consensus 98 ~~~vlDvG-~G~G~~-~~~l~~~~~~~~~~~~~D~--~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~ 173 (254)
.++|+=|| ||+|.. +..++.+. +.+ +++.|. +...+..++ ..+.+..+.-.+.+...|+|+.+-.+..-+ +
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~-G~~-V~~~D~~~~~~~~~l~~-~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~-p- 96 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANE-GYQ-ISGSDLAPNSVTQHLTA-LGAQIYFHHRPENVLDASVVVVSTAISADN-P- 96 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT-TCE-EEEECSSCCHHHHHHHH-TTCEEESSCCGGGGTTCSEEEECTTSCTTC-H-
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhC-CCe-EEEEECCCCHHHHHHHH-CCCEEECCCCHHHcCCCCEEEECCCCCCCC-H-
Confidence 46788888 567875 24444443 567 899996 333333222 467777663322345569999887664311 1
Q ss_pred HHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCC
Q 025363 174 CKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFP 244 (254)
Q Consensus 174 ~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 244 (254)
.+.++++. |.-++.+.-+ ..+... .....++.-++|+.-|-+-+..+|+++|+.
T Consensus 97 ---~~~~a~~~----gi~v~~~~e~--------l~~~~~--~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~ 150 (494)
T 4hv4_A 97 ---EIVAAREA----RIPVIRRAEM--------LAELMR--YRHGIAVAGTHGKTTTTAMLSSIYAEAGLD 150 (494)
T ss_dssp ---HHHHHHHT----TCCEEEHHHH--------HHHHHT--TSEEEEEECSSSHHHHHHHHHHHHHHTTCC
T ss_pred ---HHHHHHHC----CCCEEcHHHH--------HHHHhc--CCCEEEEecCCChHHHHHHHHHHHHhcCCC
Confidence 23333332 2224433210 000000 000112123567777788888999999985
No 418
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=55.01 E-value=11 Score=30.87 Aligned_cols=123 Identities=14% Similarity=0.018 Sum_probs=71.2
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCCCeE-EEeec-hHHHhhCCCC-CCcEEEeCCCCCC----CC--CccEEEecccccc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFICEG-INFDL-PEVVAEAPSI-PGVTHIGGDMFKS----IP--AADAIFMKWVLTT 168 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~-~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~----~p--~~D~v~~~~vlh~ 168 (254)
..+++|+-||.|.+...+.++.-+.+.+ ..+|. +...+..+.+ +.. +..+|+.+- ++ ..|+++..---..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~ 88 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMSPPCQP 88 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEECCCCTT
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEecCCccC
Confidence 4689999999999999998874323414 57888 6555444333 222 556777654 23 2399887554333
Q ss_pred C-----------CHHHHHHHHHHHHH-hCCC---CCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHH
Q 025363 169 W-----------TDDECKLIMENCYK-ALPA---GGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQE 233 (254)
Q Consensus 169 ~-----------~~~~~~~il~~~~~-~L~p---gG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 233 (254)
| .|+. ..++.++.+ +++. --+++++|.+..-. .+ .+.+.
T Consensus 89 fs~S~ag~~~~~~d~r-~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~-----------------------~~--~~~~~ 142 (327)
T 3qv2_A 89 YNNSIMSKHKDINDPR-AKSVLHLYRDILPYLINKPKHIFIENVPLFK-----------------------ES--LVFKE 142 (327)
T ss_dssp CSHHHHTTTCTTTCGG-GHHHHHHHHTTGGGCSSCCSEEEEEECGGGG-----------------------GS--HHHHH
T ss_pred cccccCCCCCCCcccc-chhHHHHHHHHHHHhccCCCEEEEEchhhhc-----------------------Ch--HHHHH
Confidence 4 2222 245555555 4421 13567777653210 01 23456
Q ss_pred HHHHHHhCCCCeee
Q 025363 234 FKQLGFFAGFPHLR 247 (254)
Q Consensus 234 ~~~ll~~aGf~~~~ 247 (254)
+.+.|++.|+.+..
T Consensus 143 i~~~l~~~GY~v~~ 156 (327)
T 3qv2_A 143 IYNILIKNQYYIKD 156 (327)
T ss_dssp HHHHHHHTTCEEEE
T ss_pred HHHHHHhCCCEEEE
Confidence 77778888887543
No 419
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=54.54 E-value=7.9 Score=31.35 Aligned_cols=87 Identities=13% Similarity=0.075 Sum_probs=52.7
Q ss_pred eEEEecC--cccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEE---eCCCCCCC-CCc-cEEEeccccccCCH
Q 025363 100 RLVDVGG--SAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHI---GGDMFKSI-PAA-DAIFMKWVLTTWTD 171 (254)
Q Consensus 100 ~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~---~~d~~~~~-p~~-D~v~~~~vlh~~~~ 171 (254)
+||=+|+ |.|..+.++++.. +++ +++.+. ++-.+.+++..--.++ ..+....+ +.. |+++-. ...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~-----~g~ 221 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQ-VAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDT-----VGD 221 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCC-EEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEES-----SCH
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEEC-----CCc
Confidence 4888884 6899999999986 458 988886 5544444332111111 11111112 223 776542 122
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 172 DECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 172 ~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
..++.+.++|+|+|++++.-..
T Consensus 222 ----~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 222 ----KVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp ----HHHHHHHHTEEEEEEEEECCCT
T ss_pred ----HHHHHHHHHHhcCCEEEEEecC
Confidence 2688999999999999987543
No 420
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=54.54 E-value=29 Score=29.70 Aligned_cols=92 Identities=9% Similarity=0.058 Sum_probs=49.7
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-----------------CCcEEEeCCCCCCCCCccE
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-----------------PGVTHIGGDMFKSIPAADA 159 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-----------------~~i~~~~~d~~~~~p~~D~ 159 (254)
.++|.=||+|.=....+.+-+. +.+ ++++|. ++.++...+. .++.+. .|..+...++|+
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~-V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~t-td~~ea~~~aDv 112 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHE-VVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRAT-TDKHDAYRNADY 112 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSE-EEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEE-SCHHHHHTTCSE
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCe-EEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEE-cCHHHHHhCCCE
Confidence 4578888877433332222222 556 999998 7666554331 123322 222112344598
Q ss_pred EEecccccc------CCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 160 IFMKWVLTT------WTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 160 v~~~~vlh~------~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
|++.---.. .+-.....+++.+.+ |+||..++.
T Consensus 113 ViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~ 151 (432)
T 3pid_A 113 VIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMII 151 (432)
T ss_dssp EEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEE
T ss_pred EEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEE
Confidence 887432210 001356778888988 998766554
No 421
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=54.20 E-value=13 Score=30.57 Aligned_cols=84 Identities=18% Similarity=0.122 Sum_probs=48.0
Q ss_pred CCeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hH-HHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHH
Q 025363 98 VKRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PE-VVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDE 173 (254)
Q Consensus 98 ~~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~-~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~ 173 (254)
..+|.=||+|. |. ++..+.+. +.+ +++.|. ++ ..+.+.+ ..+... |..+....+|+|++.- ++..
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~--G~~-V~~~~~~~~~~~~~a~~-~G~~~~--~~~e~~~~aDvVilav-----p~~~ 84 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS--GVD-VTVGLRSGSATVAKAEA-HGLKVA--DVKTAVAAADVVMILT-----PDEF 84 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT--TCC-EEEECCTTCHHHHHHHH-TTCEEE--CHHHHHHTCSEEEECS-----CHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC--cCE-EEEEECChHHHHHHHHH-CCCEEc--cHHHHHhcCCEEEEeC-----CcHH
Confidence 35788888874 32 33333332 356 888886 32 2333322 234332 3222234469988743 4555
Q ss_pred HHHHHH-HHHHhCCCCCEEE
Q 025363 174 CKLIME-NCYKALPAGGKLI 192 (254)
Q Consensus 174 ~~~il~-~~~~~L~pgG~l~ 192 (254)
...+++ ++...|+||..|+
T Consensus 85 ~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 85 QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HHHHHHHHTGGGCCTTCEEE
T ss_pred HHHHHHHHHHhhCCCCCEEE
Confidence 577887 8888899887665
No 422
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=53.60 E-value=26 Score=28.68 Aligned_cols=90 Identities=18% Similarity=0.113 Sum_probs=55.1
Q ss_pred CCCCC--CeEEEecC--cccHHHHHHHHHcCCC-CeEEEeec-hHHHhhCCC-CCCcEEEeCCCCCC-C--------CCc
Q 025363 94 GFKGV--KRLVDVGG--SAGDCLRMILQKHRFI-CEGINFDL-PEVVAEAPS-IPGVTHIGGDMFKS-I--------PAA 157 (254)
Q Consensus 94 ~~~~~--~~vlDvG~--G~G~~~~~l~~~~~~~-~~~~~~D~-~~~~~~~~~-~~~i~~~~~d~~~~-~--------p~~ 157 (254)
...++ .+||-.|+ |.|..+..+++.. +. + +++.+. ++-.+.+++ ..--..+ |..+. . +..
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~-Vi~~~~~~~~~~~~~~~~g~~~~~--d~~~~~~~~~~~~~~~~~ 230 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSR-VVGICGTHEKCILLTSELGFDAAI--NYKKDNVAEQLRESCPAG 230 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSE-EEEEESCHHHHHHHHHTSCCSEEE--ETTTSCHHHHHHHHCTTC
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCe-EEEEeCCHHHHHHHHHHcCCceEE--ecCchHHHHHHHHhcCCC
Confidence 36677 89999986 6777888888775 45 6 888887 544444332 2111111 22111 1 112
Q ss_pred -cEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 158 -DAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 158 -D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
|+++-.-. ...++.+.++|++||++++.-.
T Consensus 231 ~d~vi~~~G---------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 231 VDVYFDNVG---------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp EEEEEESCC---------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCEEEECCC---------HHHHHHHHHHhccCcEEEEECC
Confidence 66664322 1467888999999999988654
No 423
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=53.15 E-value=20 Score=31.15 Aligned_cols=53 Identities=15% Similarity=0.054 Sum_probs=34.2
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC----CCcEEEeCCCCC
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFK 152 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~----~~i~~~~~d~~~ 152 (254)
..+++|+=||.|.+...+.++ +.+.+..+|. +...+..+.+ +...+..+|+.+
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~ 145 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRD 145 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhh
Confidence 468999999999999999876 3332466677 5444332211 345566677643
No 424
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=52.79 E-value=3.3 Score=34.95 Aligned_cols=40 Identities=18% Similarity=0.134 Sum_probs=28.6
Q ss_pred CCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCC
Q 025363 97 GVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAP 138 (254)
Q Consensus 97 ~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~ 138 (254)
++.+|+=+|+| .|..+..+++.+ +.+ ++++|. +...+.+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~-V~v~D~~~~~l~~~~ 224 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-GAK-TTGYDVRPEVAEQVR 224 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-TCE-EEEECSSGGGHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHHH
Confidence 46789999987 566666677766 457 999998 65554443
No 425
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=52.42 E-value=24 Score=27.96 Aligned_cols=87 Identities=11% Similarity=0.028 Sum_probs=50.1
Q ss_pred CeEEEecCcc--cHHHHHHHHHc-CCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHHH
Q 025363 99 KRLVDVGGSA--GDCLRMILQKH-RFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDEC 174 (254)
Q Consensus 99 ~~vlDvG~G~--G~~~~~l~~~~-~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~ 174 (254)
.+|.=||||. +.++..+++.. +..+ ++++|. ++..+...+.-++... .|..+....+|+|++.- ++...
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~-V~v~dr~~~~~~~l~~~~gi~~~-~~~~~~~~~aDvVilav-----~p~~~ 76 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNR-ICVTNRSLDKLDFFKEKCGVHTT-QDNRQGALNADVVVLAV-----KPHQI 76 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGG-EEEECSSSHHHHHHHHTTCCEEE-SCHHHHHSSCSEEEECS-----CGGGH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCe-EEEEeCCHHHHHHHHHHcCCEEe-CChHHHHhcCCeEEEEe-----CHHHH
Confidence 5788888873 22344444442 2226 888998 6655554432244432 22222234469988744 34556
Q ss_pred HHHHHHHHHh-CCCCCEEE
Q 025363 175 KLIMENCYKA-LPAGGKLI 192 (254)
Q Consensus 175 ~~il~~~~~~-L~pgG~l~ 192 (254)
..+++++... ++++..++
T Consensus 77 ~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 77 KMVCEELKDILSETKILVI 95 (280)
T ss_dssp HHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHhhccCCCeEEE
Confidence 7889999988 87665444
No 426
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=51.87 E-value=23 Score=30.65 Aligned_cols=99 Identities=10% Similarity=0.006 Sum_probs=52.9
Q ss_pred CCCCCeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------C-------------CcEEEeCCCCC
Q 025363 95 FKGVKRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSI------P-------------GVTHIGGDMFK 152 (254)
Q Consensus 95 ~~~~~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~-------------~i~~~~~d~~~ 152 (254)
..+.++|.=||+|. |. ++..|++. +.+ ++++|. ++.++..++. + ++.+. .|..+
T Consensus 5 ~~~~~~I~VIG~G~vG~~lA~~la~~--G~~-V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~t-td~~~ 80 (478)
T 2y0c_A 5 HHGSMNLTIIGSGSVGLVTGACLADI--GHD-VFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFS-TDIEA 80 (478)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHT--TCE-EEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-CCHHH
T ss_pred cCCCceEEEECcCHHHHHHHHHHHhC--CCE-EEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEE-CCHHH
Confidence 34568899998884 33 33334443 346 899998 6666554432 1 12221 11111
Q ss_pred CCCCccEEEecccc-----ccCCHHHHHHHHHHHHHhCCCCCEEEEEcccc
Q 025363 153 SIPAADAIFMKWVL-----TTWTDDECKLIMENCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 153 ~~p~~D~v~~~~vl-----h~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~ 198 (254)
....+|+|++.--- ...+......+++.+.+.|+||..+ +.....
T Consensus 81 a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iV-V~~STv 130 (478)
T 2y0c_A 81 AVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVI-VDKSTV 130 (478)
T ss_dssp HHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEE-EECSCC
T ss_pred HhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEE-EEeCCc
Confidence 12235888864311 0001156778889999999986544 544433
No 427
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=51.73 E-value=26 Score=29.75 Aligned_cols=92 Identities=10% Similarity=0.050 Sum_probs=55.7
Q ss_pred CCCCCCeEEEecC--cccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCC--C-cEEEeCCCCC---------------
Q 025363 94 GFKGVKRLVDVGG--SAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIP--G-VTHIGGDMFK--------------- 152 (254)
Q Consensus 94 ~~~~~~~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~--~-i~~~~~d~~~--------------- 152 (254)
...++.+||=.|+ |.|..+..+++.. +.+ +++.+. ++-++.+++.. . +.....|+.+
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~-vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNG-GGI-PVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT-TCE-EEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhH
Confidence 4677899999985 6788888888875 456 777765 55554443321 1 1111112110
Q ss_pred ---C----CCC-ccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 153 ---S----IPA-ADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 153 ---~----~p~-~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
. .+. .|+++-.-. . ..++...+.|++||+++++-.
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G-----~----~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTG-----R----VTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSC-----H----HHHHHHHHHSCTTCEEEESCC
T ss_pred HHHHHHHHhCCCceEEEECCC-----c----hHHHHHHHHHhcCCEEEEEec
Confidence 0 122 388775321 1 356788889999999998654
No 428
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=51.52 E-value=3.7 Score=34.54 Aligned_cols=36 Identities=14% Similarity=0.041 Sum_probs=25.8
Q ss_pred CCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHH
Q 025363 97 GVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVV 134 (254)
Q Consensus 97 ~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~ 134 (254)
++.+|+=+|+| .|..+..+++.+. .+ ++++|. +...
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~-V~~~d~~~~~~ 208 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG-AV-VMATDVRAATK 208 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CE-EEEECSCSTTH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CE-EEEEeCCHHHH
Confidence 46789999976 4666666777664 57 999997 5433
No 429
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=51.32 E-value=96 Score=27.07 Aligned_cols=127 Identities=15% Similarity=0.156 Sum_probs=66.5
Q ss_pred CCeEEEec-CcccHHH-HHHHHHcCCCCeEEEeec---hHHHhhCCCCCCcEEEeCCCCCCC-CCccEEEeccccccCCH
Q 025363 98 VKRLVDVG-GSAGDCL-RMILQKHRFICEGINFDL---PEVVAEAPSIPGVTHIGGDMFKSI-PAADAIFMKWVLTTWTD 171 (254)
Q Consensus 98 ~~~vlDvG-~G~G~~~-~~l~~~~~~~~~~~~~D~---~~~~~~~~~~~~i~~~~~d~~~~~-p~~D~v~~~~vlh~~~~ 171 (254)
.++|.=|| ||+|..+ ..++.+ -+.+ +++.|. +.+.+..++ ..|.+..|.-.+.+ ...|+|+.+-.+..- .
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~-~G~~-V~~sD~~~~~~~~~~L~~-~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~-~ 94 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARA-LGHT-VTGSDANIYPPMSTQLEQ-AGVTIEEGYLIAHLQPAPDLVVVGNAMKRG-M 94 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCE-EEEEESCCCTTHHHHHHH-TTCEEEESCCGGGGCSCCSEEEECTTCCTT-S
T ss_pred CCEEEEEEecHhhHHHHHHHHHh-CCCE-EEEECCCCCcHHHHHHHH-CCCEEECCCCHHHcCCCCCEEEECCCcCCC-C
Confidence 46777777 5777654 333433 3567 888886 233333222 46777776433334 345999988776421 1
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccCceecCHHHHHHHHHhCCCCe
Q 025363 172 DECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGNHRTEQEFKQLGFFAGFPH 245 (254)
Q Consensus 172 ~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 245 (254)
+ .++++++. |.=++.+.-+ ..... .-.....++.-++|+.-|-.-+..+|+++|++.
T Consensus 95 p----~l~~a~~~----gi~v~~~~e~--------l~~~~-~~~~~vIaVTGTnGKTTTt~li~~iL~~~G~~~ 151 (524)
T 3hn7_A 95 D----VIEYMLDT----GLRYTSGPQF--------LSEQV-LQSRHVIAVAGTHGKTTTTTMLAWILHYAGIDA 151 (524)
T ss_dssp H----HHHHHHHH----TCCEEEHHHH--------HHHHT-GGGSEEEEEECSSCHHHHHHHHHHHHHHTTCCC
T ss_pred H----HHHHHHHC----CCcEEEHHHH--------HHHHH-hccCcEEEEECCCCHHHHHHHHHHHHHHcCCCc
Confidence 2 23333332 2224433210 00000 001111222345678777788889999999864
No 430
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=50.93 E-value=22 Score=28.70 Aligned_cols=91 Identities=9% Similarity=0.009 Sum_probs=52.5
Q ss_pred CCCCC-eEEEecC--cccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEe-CC----CCCCC-CCc-cEEEec
Q 025363 95 FKGVK-RLVDVGG--SAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIG-GD----MFKSI-PAA-DAIFMK 163 (254)
Q Consensus 95 ~~~~~-~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~-~d----~~~~~-p~~-D~v~~~ 163 (254)
..++. +||-+|+ |.|..+..+++.. +.+ +++.+. ++-.+.+++..--.++. .+ ..... ... |+++-.
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~-vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~ 223 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKR-GYT-VEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDP 223 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHT-TCC-EEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEEC
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHC-CCE-EEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEEC
Confidence 55554 8999985 7888999999886 467 888876 44333333221111111 11 11111 123 877643
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 164 WVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
-. . ..++.+.++|+|+|++++.-.
T Consensus 224 ~g-----~----~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 224 VG-----G----RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp ST-----T----TTHHHHHHTEEEEEEEEECSC
T ss_pred Cc-----H----HHHHHHHHhhccCCEEEEEee
Confidence 21 1 236778889999999988654
No 431
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=50.68 E-value=13 Score=30.93 Aligned_cols=32 Identities=22% Similarity=0.197 Sum_probs=25.9
Q ss_pred CCeEEEecCcccHHHHH--HHHHcCCCCeEEEeec
Q 025363 98 VKRLVDVGGSAGDCLRM--ILQKHRFICEGINFDL 130 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~--l~~~~~~~~~~~~~D~ 130 (254)
+++|+=||+|.+.++.+ |.+..++.+ ++++|.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~-Vtlie~ 35 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIE-VTLIEP 35 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSE-EEEECS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCe-EEEEeC
Confidence 57899999999887655 667777888 998885
No 432
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=50.42 E-value=37 Score=28.10 Aligned_cols=88 Identities=10% Similarity=0.043 Sum_probs=50.5
Q ss_pred CCeEEEecCcccH--HHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------C------CcEEEeCCCCCCCCCccEEE
Q 025363 98 VKRLVDVGGSAGD--CLRMILQKHRFICEGINFDL-PEVVAEAPSI-------P------GVTHIGGDMFKSIPAADAIF 161 (254)
Q Consensus 98 ~~~vlDvG~G~G~--~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------~------~i~~~~~d~~~~~p~~D~v~ 161 (254)
.++|.=||+|.=. ++..|++. +.+ ++++|. ++.++..++. + ++.+. .|..+....+|+|+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~--G~~-V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea~~~aDvVi 104 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK--GQK-VRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKASLEGVTDIL 104 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT--TCC-EEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHHHTTCCEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCe-EEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHHHhcCCEEE
Confidence 3578889886422 33333333 346 888887 5554443221 1 12221 12211133459888
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 162 MKWVLTTWTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 162 ~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
+. .+......+++++...++|+..++..
T Consensus 105 la-----Vp~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 105 IV-----VPSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp EC-----CCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EC-----CCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 74 35567788999999999988766554
No 433
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=50.18 E-value=93 Score=25.10 Aligned_cols=94 Identities=13% Similarity=0.113 Sum_probs=45.4
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCC--CeEEEeec-hHHH-----hhCCC--C-CCcEEEeCCCCCCCCCccEEEecccc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFI--CEGINFDL-PEVV-----AEAPS--I-PGVTHIGGDMFKSIPAADAIFMKWVL 166 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~--~~~~~~D~-~~~~-----~~~~~--~-~~i~~~~~d~~~~~p~~D~v~~~~vl 166 (254)
..+|.=||+|.=..+..+.-...+. + ++++|+ ++.+ +.... . .++++...| .+.+.++|+|++.--.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~e-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~-~~a~~~aDvVii~~g~ 84 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANE-LVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-YSDVKDCDVIVVTAGA 84 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSE-EEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-GGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCE-EEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECC-HHHhCCCCEEEEcCCC
Confidence 4678889886433333222222233 5 888997 3221 11111 1 345555433 2335667998875433
Q ss_pred ccCCH-------HH----HHHHHHHHHHhCCCCCEEEEE
Q 025363 167 TTWTD-------DE----CKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 167 h~~~~-------~~----~~~il~~~~~~L~pgG~l~i~ 194 (254)
-.-+. .. ..++.+.+.+. .|++++++.
T Consensus 85 p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (318)
T 1y6j_A 85 NRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV 122 (318)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred CCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 21111 11 24555555555 699998884
No 434
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=49.76 E-value=25 Score=28.65 Aligned_cols=88 Identities=17% Similarity=0.164 Sum_probs=47.4
Q ss_pred CeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC--------C-CCCC----CCCccEEEe
Q 025363 99 KRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG--------D-MFKS----IPAADAIFM 162 (254)
Q Consensus 99 ~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~--------d-~~~~----~p~~D~v~~ 162 (254)
.+|.=||+|. |. ++..|++. +.+ ++++|. ++..+..++...+.+... + ..++ ...+|+|++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~ 81 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQS-VLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 81 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCE-EEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCE-EEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEE
Confidence 5788898874 33 23333333 346 888888 655544332111221110 0 1111 233598887
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 163 KWVLTTWTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 163 ~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
.--- .....+++.+...++||..++..
T Consensus 82 ~v~~-----~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 82 VVPA-----IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp CSCG-----GGHHHHHHHHGGGCCTTCEEEES
T ss_pred eCCc-----hHHHHHHHHHHHhCCCCCEEEEc
Confidence 4432 22357788898999987765543
No 435
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=49.59 E-value=57 Score=26.15 Aligned_cols=92 Identities=12% Similarity=0.041 Sum_probs=45.4
Q ss_pred eEEEecCcccHHHHHHHHHcCCC--CeEEEeec-hHHHhh-----CCCC---CCcEEEeCCCCCCCCCccEEEecccccc
Q 025363 100 RLVDVGGSAGDCLRMILQKHRFI--CEGINFDL-PEVVAE-----APSI---PGVTHIGGDMFKSIPAADAIFMKWVLTT 168 (254)
Q Consensus 100 ~vlDvG~G~G~~~~~l~~~~~~~--~~~~~~D~-~~~~~~-----~~~~---~~i~~~~~d~~~~~p~~D~v~~~~vlh~ 168 (254)
+|.=||+|.=..+....-...+. + ++++|. ++.++. .... ..+++...|. +.+.++|+|+..--...
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~e-V~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~-~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSE-LVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGH-SELADAQVVILTAGANQ 79 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSE-EEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECG-GGGTTCSEEEECC----
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCE-EEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCH-HHhCCCCEEEEcCCCCC
Confidence 67778876433333322222233 6 889998 442221 1111 2344443332 33566799887542211
Q ss_pred CCH-----------HHHHHHHHHHHHhCCCCCEEEEE
Q 025363 169 WTD-----------DECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 169 ~~~-----------~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
-+. +-..++.+++.+. .|++++++.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~ 115 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVT 115 (304)
T ss_dssp --------CHHHHHHHHHHHHHHHHHH-CSSSEEEEC
T ss_pred CCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence 100 1124566666666 589988773
No 436
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=49.40 E-value=42 Score=27.34 Aligned_cols=88 Identities=11% Similarity=0.164 Sum_probs=53.3
Q ss_pred CCCeEEEec--CcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeC--CCCCCC----CCc-cEEEecccc
Q 025363 97 GVKRLVDVG--GSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGG--DMFKSI----PAA-DAIFMKWVL 166 (254)
Q Consensus 97 ~~~~vlDvG--~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~--d~~~~~----p~~-D~v~~~~vl 166 (254)
++.+||=+| +|.|..+..+++.. +.+ +++.+. ++-.+.+++..--.++.. |+.+.+ +.. |+++-..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~-- 225 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLR-VITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTF-- 225 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCE-EEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESS--
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECC--
Confidence 678999884 45788888888876 457 998887 655554443211111111 110101 122 7776421
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 167 TTWTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 167 h~~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
.. ...++.+.++|+|+|+++..
T Consensus 226 ---g~---~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 226 ---NT---DMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ---CH---HHHHHHHHHHEEEEEEEEES
T ss_pred ---Cc---hHHHHHHHHHhccCCEEEEE
Confidence 11 34678888999999999765
No 437
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=49.08 E-value=23 Score=24.26 Aligned_cols=27 Identities=4% Similarity=-0.096 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHHHhCCCC--CEEEEEcc
Q 025363 170 TDDECKLIMENCYKALPAG--GKLIACEP 196 (254)
Q Consensus 170 ~~~~~~~il~~~~~~L~pg--G~l~i~d~ 196 (254)
+++.+.++++.+.+.+..| |++++.+.
T Consensus 82 ~de~ve~vv~~I~~~~~tg~~GkIFV~~V 110 (119)
T 2cz4_A 82 SEEVALRILQRLQEEYFPHYAVIAYVENV 110 (119)
T ss_dssp CHHHHHHHHHHHHHHTTTTSCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCCEEEEEEEe
Confidence 5788999999999888888 99888764
No 438
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=48.51 E-value=53 Score=21.28 Aligned_cols=63 Identities=19% Similarity=0.052 Sum_probs=37.1
Q ss_pred CCeEEEecCcccHHHHHHHH---HcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC------CCCccEEEecc
Q 025363 98 VKRLVDVGGSAGDCLRMILQ---KHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS------IPAADAIFMKW 164 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~---~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~------~p~~D~v~~~~ 164 (254)
..+|+=+|+ |..+..+++ ..+..+ ++++|. ++-.+... ..++.+...|..+. +...|+|+..-
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~-v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYS-VTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEE-EEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCce-EEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 457888887 444444443 333256 888887 55544433 24677788887653 12348877544
No 439
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=48.15 E-value=20 Score=28.96 Aligned_cols=91 Identities=11% Similarity=0.042 Sum_probs=53.0
Q ss_pred CCCCC-eEEEecC--cccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEE---eCC--CCCCC-CCc-cEEEec
Q 025363 95 FKGVK-RLVDVGG--SAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHI---GGD--MFKSI-PAA-DAIFMK 163 (254)
Q Consensus 95 ~~~~~-~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~---~~d--~~~~~-p~~-D~v~~~ 163 (254)
..++. +||-+|+ |.|..+..+++.. +.+ +++.+. ++-.+.+++..--..+ ..+ ..... ... |+++-.
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~-vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~ 224 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKR-GYD-VVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDP 224 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHH-TCC-EEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEEC
Confidence 55554 8999985 6888899998876 457 888776 4333333221110111 111 11111 222 777643
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 164 WVLTTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
- .. ..+....++|+|||++++.-.
T Consensus 225 ~-----g~----~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 225 V-----GG----KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp C-----CT----HHHHHHHTTEEEEEEEEECCC
T ss_pred C-----cH----HHHHHHHHhhcCCCEEEEEec
Confidence 2 11 257788899999999988654
No 440
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=47.95 E-value=31 Score=28.46 Aligned_cols=92 Identities=15% Similarity=0.047 Sum_probs=52.5
Q ss_pred CC-CCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCC-CCCCcEEEeCCC---CCCC-CCccEEEecccc
Q 025363 95 FK-GVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAP-SIPGVTHIGGDM---FKSI-PAADAIFMKWVL 166 (254)
Q Consensus 95 ~~-~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~-~~~~i~~~~~d~---~~~~-p~~D~v~~~~vl 166 (254)
.. ++.+||-+|+| .|..+..+++.. +.+ +++.+. ++-.+.+. +..--.++..+- .... ...|+|+-.-..
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~-Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAF-GSK-VTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCE-EEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence 55 77889888865 577888888876 457 888886 54444333 221111221110 0011 223887753321
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 167 TTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 167 h~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
- ..++...++|+|+|+++..-.
T Consensus 262 ~--------~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 262 V--------HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp C--------CCSHHHHHHEEEEEEEEECCC
T ss_pred H--------HHHHHHHHHHhcCCEEEEEcc
Confidence 1 124566788999999887654
No 441
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=47.52 E-value=42 Score=27.69 Aligned_cols=92 Identities=10% Similarity=-0.029 Sum_probs=53.4
Q ss_pred CCCCCeEEEec--CcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeC---CCCCCC---CCccEEEecccc
Q 025363 95 FKGVKRLVDVG--GSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGG---DMFKSI---PAADAIFMKWVL 166 (254)
Q Consensus 95 ~~~~~~vlDvG--~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~---d~~~~~---p~~D~v~~~~vl 166 (254)
..++.+||=.| +|.|..+..+++.. +.+ +++.+.++-.+.+++..--.++.. |+.+.+ ...|+++-.-.-
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~-Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~ 258 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAH-VTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG 258 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCE-EEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCE-EEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCC
Confidence 56778999998 56888999999886 457 877776443333332211111211 111111 123887743221
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 167 TTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 167 h~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
. ...++...++|++||+++..-
T Consensus 259 -----~--~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 259 -----S--TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp -----T--HHHHGGGGBCSSSCCEEEESC
T ss_pred -----h--hhhhHHHHHhhcCCcEEEEeC
Confidence 1 123566778899999998754
No 442
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=47.25 E-value=22 Score=28.76 Aligned_cols=95 Identities=16% Similarity=0.031 Sum_probs=55.5
Q ss_pred CeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC----CCCccEEEecccccc-----
Q 025363 99 KRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS----IPAADAIFMKWVLTT----- 168 (254)
Q Consensus 99 ~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~----~p~~D~v~~~~vlh~----- 168 (254)
++|+|+=||.|.+...+.++ +.+.+.+.|+ +...+..+.+..-.++.+|+.+- +|..|+++..---..
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag 78 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGG 78 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETT
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCC
Confidence 47999999999999998887 3442456676 54444333333345677887653 344588886332111
Q ss_pred ----CCHHHHHHHHH---HHHHhCCCCCEEEEEcccc
Q 025363 169 ----WTDDECKLIME---NCYKALPAGGKLIACEPVL 198 (254)
Q Consensus 169 ----~~~~~~~~il~---~~~~~L~pgG~l~i~d~~~ 198 (254)
..|+. -.++. ++.+.++| +++++|.+.
T Consensus 79 ~~~g~~d~R-~~L~~~~~r~i~~~~P--k~~~~ENV~ 112 (331)
T 3ubt_Y 79 SLRGIDDPR-GKLFYEYIRILKQKKP--IFFLAENVK 112 (331)
T ss_dssp EECCTTCGG-GHHHHHHHHHHHHHCC--SEEEEEECC
T ss_pred CccCCCCch-hHHHHHHHHHHhccCC--eEEEeeeec
Confidence 22321 12333 34445678 567777653
No 443
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=47.21 E-value=36 Score=28.41 Aligned_cols=33 Identities=6% Similarity=0.033 Sum_probs=22.4
Q ss_pred CccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 156 AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 156 ~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
.+|+|++.--- .....+++++...++|+..++.
T Consensus 82 ~aD~Vilav~~-----~~~~~v~~~l~~~l~~~~ivv~ 114 (404)
T 3c7a_A 82 GADVVILTVPA-----FAHEGYFQAMAPYVQDSALIVG 114 (404)
T ss_dssp TCSEEEECSCG-----GGHHHHHHHHTTTCCTTCEEEE
T ss_pred CCCEEEEeCch-----HHHHHHHHHHHhhCCCCcEEEE
Confidence 35988874432 3346788999999988765444
No 444
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=45.92 E-value=99 Score=23.70 Aligned_cols=97 Identities=11% Similarity=0.050 Sum_probs=54.0
Q ss_pred CCeEEEecCcc----cH-HHHHHHHHcCCCCeEEEeec-hHHHh---hC-CCC--CCcEEEeCCCCCC--CC--------
Q 025363 98 VKRLVDVGGSA----GD-CLRMILQKHRFICEGINFDL-PEVVA---EA-PSI--PGVTHIGGDMFKS--IP-------- 155 (254)
Q Consensus 98 ~~~vlDvG~G~----G~-~~~~l~~~~~~~~~~~~~D~-~~~~~---~~-~~~--~~i~~~~~d~~~~--~p-------- 155 (254)
++++|=.|++. |. ++..|+++ +.+ +++.+. +...+ .. ... .++.++..|+.+. +.
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~--G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEA--GAR-LIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT--TCE-EEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHC--CCE-EEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 45677777652 22 33444444 556 777765 32111 11 111 3789999999876 21
Q ss_pred ---CccEEEecccc----------ccCCHHHHH-----------HHHHHHHHhCCCCCEEEEEccc
Q 025363 156 ---AADAIFMKWVL----------TTWTDDECK-----------LIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 156 ---~~D~v~~~~vl----------h~~~~~~~~-----------~il~~~~~~L~pgG~l~i~d~~ 197 (254)
.-|+++..-.+ ...+.++.. .+++.+...|+++|+++.+-..
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 11776654322 223434333 3567777888888988876544
No 445
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=45.91 E-value=23 Score=29.10 Aligned_cols=92 Identities=17% Similarity=0.032 Sum_probs=53.5
Q ss_pred CC-CCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCC-CCCCcEEEeC-C--CCCCCCC-ccEEEecccc
Q 025363 95 FK-GVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAP-SIPGVTHIGG-D--MFKSIPA-ADAIFMKWVL 166 (254)
Q Consensus 95 ~~-~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~-~~~~i~~~~~-d--~~~~~p~-~D~v~~~~vl 166 (254)
.. ++.+||-+|+| .|..+..+++.. +.+ +++.+. ++-.+.++ +..--.++.. + ....... .|+|+-.-.-
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~-Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~ 254 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAM-GHH-VTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPV 254 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHH-TCE-EEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCe-EEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCC
Confidence 55 78899988865 578888888876 457 888887 55444433 2211111111 1 0001122 3887743321
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCEEEEEcc
Q 025363 167 TTWTDDECKLIMENCYKALPAGGKLIACEP 196 (254)
Q Consensus 167 h~~~~~~~~~il~~~~~~L~pgG~l~i~d~ 196 (254)
. ..++...++|+|+|++++.-.
T Consensus 255 ~--------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 255 H--------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp C--------CCSHHHHTTEEEEEEEEECSC
T ss_pred h--------HHHHHHHHHhccCCEEEEeCC
Confidence 1 124567789999999988654
No 446
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=45.81 E-value=6.3 Score=31.99 Aligned_cols=26 Identities=15% Similarity=0.309 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 172 DECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 172 ~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
++..+.|..+.+.|+|||+|+|+.+.
T Consensus 222 ~~l~~~l~~~~~~l~~ggr~~visfh 247 (301)
T 1m6y_A 222 ENLKEFLKKAEDLLNPGGRIVVISFH 247 (301)
T ss_dssp HHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEecC
Confidence 45678899999999999999998754
No 447
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=45.42 E-value=37 Score=26.64 Aligned_cols=83 Identities=17% Similarity=0.071 Sum_probs=45.0
Q ss_pred eEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC-CCCccEEEeccccccCCHHHHHH
Q 025363 100 RLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IPAADAIFMKWVLTTWTDDECKL 176 (254)
Q Consensus 100 ~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~-~p~~D~v~~~~vlh~~~~~~~~~ 176 (254)
+|.=||+|. |......+.+ +.+ ++++|. ++..+...+. .+... + ... ...+|+|++.-- ++.....
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~--g~~-V~~~~~~~~~~~~~~~~-g~~~~--~-~~~~~~~~D~vi~~v~----~~~~~~~ 71 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR--RFP-TLVWNRTFEKALRHQEE-FGSEA--V-PLERVAEARVIFTCLP----TTREVYE 71 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT--TSC-EEEECSSTHHHHHHHHH-HCCEE--C-CGGGGGGCSEEEECCS----SHHHHHH
T ss_pred eEEEEcccHHHHHHHHHHhC--CCe-EEEEeCCHHHHHHHHHC-CCccc--C-HHHHHhCCCEEEEeCC----ChHHHHH
Confidence 577788874 4333333333 457 888887 5544433221 12222 1 222 344598887432 1233566
Q ss_pred HHHHHHHhCCCCCEEEE
Q 025363 177 IMENCYKALPAGGKLIA 193 (254)
Q Consensus 177 il~~~~~~L~pgG~l~i 193 (254)
+++.+.+.++||..++.
T Consensus 72 v~~~l~~~l~~~~~vv~ 88 (289)
T 2cvz_A 72 VAEALYPYLREGTYWVD 88 (289)
T ss_dssp HHHHHTTTCCTTEEEEE
T ss_pred HHHHHHhhCCCCCEEEE
Confidence 77888888887765543
No 448
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=45.41 E-value=82 Score=26.96 Aligned_cols=94 Identities=11% Similarity=-0.001 Sum_probs=50.3
Q ss_pred CCCeEEEecCcccHH--HHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------------------CCcEEEeCCCCCCC
Q 025363 97 GVKRLVDVGGSAGDC--LRMILQKHRFICEGINFDL-PEVVAEAPSI-------------------PGVTHIGGDMFKSI 154 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~--~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------------------~~i~~~~~d~~~~~ 154 (254)
+.-+|-=||.|.=.. +..|+++ +.+ ++++|. ++.++...+. .++.+. .|..+..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~--G~~-V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t-td~~ea~ 82 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF--GHE-VVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT-TDLAEGV 82 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCE-EEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE-SCHHHHH
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC--CCE-EEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE-CCHHHHH
Confidence 445777787764222 2233333 446 999998 6665554432 122221 2221113
Q ss_pred CCccEEEecc--cc---ccCC-HHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 155 PAADAIFMKW--VL---TTWT-DDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 155 p~~D~v~~~~--vl---h~~~-~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
.++|+|++.- -. +.-+ -.....+++.+.+.|+||..++..
T Consensus 83 ~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ 128 (446)
T 4a7p_A 83 KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTK 128 (446)
T ss_dssp TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEEC
T ss_pred hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 3458888752 11 1001 124678889999999987655543
No 449
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=45.39 E-value=86 Score=25.35 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=47.7
Q ss_pred CCCeEEEecCcccHHHHH-HHHHcCCC-CeEEEeec-hHHHhh-CC---C----CCCcEEEeCCCCCCCCCccEEEeccc
Q 025363 97 GVKRLVDVGGSAGDCLRM-ILQKHRFI-CEGINFDL-PEVVAE-AP---S----IPGVTHIGGDMFKSIPAADAIFMKWV 165 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~-l~~~~~~~-~~~~~~D~-~~~~~~-~~---~----~~~i~~~~~d~~~~~p~~D~v~~~~v 165 (254)
+..+|.=||+|.=..+.. .+...+.. + ++++|+ ++.++. +. . ..++++..++ .+.+.++|+|++.--
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~e-l~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~-~~a~~~aDvVii~ag 81 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEE-FVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE-YSDCKDADLVVITAG 81 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSE-EEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC-GGGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCE-EEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECC-HHHhCCCCEEEECCC
Confidence 456899999864333222 22222222 4 888898 433321 11 0 1355565532 334666799887553
Q ss_pred cccCCH-------HHHHHHHHHHHHhC---CCCCEEEEE
Q 025363 166 LTTWTD-------DECKLIMENCYKAL---PAGGKLIAC 194 (254)
Q Consensus 166 lh~~~~-------~~~~~il~~~~~~L---~pgG~l~i~ 194 (254)
.-.-+. .....+++.+.+.+ .|++++++.
T Consensus 82 ~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 120 (318)
T 1ez4_A 82 APQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA 120 (318)
T ss_dssp C----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 322111 01223444444322 699999885
No 450
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=45.18 E-value=5.9 Score=32.88 Aligned_cols=88 Identities=11% Similarity=0.045 Sum_probs=52.8
Q ss_pred CCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-h---HHHhhCCCCCCcEEEeC-CCCCCC----CCccEEEeccccc
Q 025363 98 VKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-P---EVVAEAPSIPGVTHIGG-DMFKSI----PAADAIFMKWVLT 167 (254)
Q Consensus 98 ~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~---~~~~~~~~~~~i~~~~~-d~~~~~----p~~D~v~~~~vlh 167 (254)
+.+||-+|+| .|..+..+++... .+ +++.+. + +-.+.+++. ....+.. |+.+.+ ...|+++-.-..
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G-a~-Vi~~~~~~~~~~~~~~~~~~-ga~~v~~~~~~~~~~~~~~~~d~vid~~g~- 256 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG-LE-VWMANRREPTEVEQTVIEET-KTNYYNSSNGYDKLKDSVGKFDVIIDATGA- 256 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT-CE-EEEEESSCCCHHHHHHHHHH-TCEEEECTTCSHHHHHHHCCEEEEEECCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CE-EEEEeCCccchHHHHHHHHh-CCceechHHHHHHHHHhCCCCCEEEECCCC-
Confidence 7899999974 4777888887764 47 888887 5 544444322 1222211 111111 113877753321
Q ss_pred cCCHHHHHHHH-HHHHHhCCCCCEEEEEcc
Q 025363 168 TWTDDECKLIM-ENCYKALPAGGKLIACEP 196 (254)
Q Consensus 168 ~~~~~~~~~il-~~~~~~L~pgG~l~i~d~ 196 (254)
. ..+ +.+.+.|+|+|++++...
T Consensus 257 ----~---~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 257 ----D---VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp ----C---THHHHHHGGGEEEEEEEEECSC
T ss_pred ----h---HHHHHHHHHHHhcCCEEEEEec
Confidence 1 235 788899999999988754
No 451
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=45.06 E-value=2.9 Score=35.58 Aligned_cols=40 Identities=13% Similarity=0.083 Sum_probs=28.5
Q ss_pred CCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCC
Q 025363 97 GVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAP 138 (254)
Q Consensus 97 ~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~ 138 (254)
++.+|+=+|+| .|..+..+++.. +.+ ++++|. +...+.++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~-V~v~D~~~~~l~~~~ 230 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAV-VSATDVRPAAKEQVA 230 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCE-EEEECSSTTHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCE-EEEEcCCHHHHHHHH
Confidence 45799999988 466666677766 457 999998 65554443
No 452
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=44.67 E-value=47 Score=27.05 Aligned_cols=92 Identities=12% Similarity=0.090 Sum_probs=49.6
Q ss_pred CeEEEecCcccHHHHHHHHHcCCC-CeEEEeec-hHHHhhCC-C----------CCCcEEEeCCCCCCCCCccEEEeccc
Q 025363 99 KRLVDVGGSAGDCLRMILQKHRFI-CEGINFDL-PEVVAEAP-S----------IPGVTHIGGDMFKSIPAADAIFMKWV 165 (254)
Q Consensus 99 ~~vlDvG~G~G~~~~~l~~~~~~~-~~~~~~D~-~~~~~~~~-~----------~~~i~~~~~d~~~~~p~~D~v~~~~v 165 (254)
.+|.=||+|+=..+...+-...+. . ++++|. ++.++... . ..++... .|. +.+.++|+|+..--
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGD-VYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG-GGGTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH-HHHCCCCEEEEcCC
Confidence 589999986533333322222344 7 888997 54443211 0 1234432 454 44666799887541
Q ss_pred cc--------cC---CHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 166 LT--------TW---TDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 166 lh--------~~---~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
.- +. +-+-..++.+++.+.. |++.+++.
T Consensus 92 ~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~ 130 (328)
T 2hjr_A 92 VPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI 130 (328)
T ss_dssp CCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred CCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 11 00 0122445666677665 89988764
No 453
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=44.64 E-value=72 Score=26.23 Aligned_cols=91 Identities=14% Similarity=0.107 Sum_probs=53.6
Q ss_pred CCCCeEEEecC--cccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeC---CCCCC----CCC-ccEEEeccc
Q 025363 96 KGVKRLVDVGG--SAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGG---DMFKS----IPA-ADAIFMKWV 165 (254)
Q Consensus 96 ~~~~~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~---d~~~~----~p~-~D~v~~~~v 165 (254)
.++.+||=+|+ +.|.++..+++.. +.+ +++...++-.+.+++..--.++.. |+.+. .+. .|+|+-.-.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~-Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g 240 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYI-PIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCIT 240 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCE-EEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCE-EEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCC
Confidence 66789999987 4899999999886 456 766544544444443321122221 11111 112 377764221
Q ss_pred cccCCHHHHHHHHHHHHHhC-CCCCEEEEEcc
Q 025363 166 LTTWTDDECKLIMENCYKAL-PAGGKLIACEP 196 (254)
Q Consensus 166 lh~~~~~~~~~il~~~~~~L-~pgG~l~i~d~ 196 (254)
. ...++.+.++| ++||+++.+-.
T Consensus 241 -----~---~~~~~~~~~~l~~~~G~iv~~g~ 264 (371)
T 3gqv_A 241 -----N---VESTTFCFAAIGRAGGHYVSLNP 264 (371)
T ss_dssp -----S---HHHHHHHHHHSCTTCEEEEESSC
T ss_pred -----c---hHHHHHHHHHhhcCCCEEEEEec
Confidence 1 24577788888 69999988754
No 454
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=44.40 E-value=29 Score=28.24 Aligned_cols=91 Identities=9% Similarity=0.022 Sum_probs=50.1
Q ss_pred CCeEEEecCcc-c-HHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeC--------CCCCC---CCCccEEEecc
Q 025363 98 VKRLVDVGGSA-G-DCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGG--------DMFKS---IPAADAIFMKW 164 (254)
Q Consensus 98 ~~~vlDvG~G~-G-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~--------d~~~~---~p~~D~v~~~~ 164 (254)
.++|.=||+|. | .++..|++. +.. ++++|.++..+..++. .+..... ...++ ...+|+|++.-
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~--g~~-V~~~~r~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vilav 78 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA--GEA-INVLARGATLQALQTA-GLRLTEDGATHTLPVRATHDAAALGEQDVVIVAV 78 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT--TCC-EEEECCHHHHHHHHHT-CEEEEETTEEEEECCEEESCHHHHCCCSEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCE-EEEEEChHHHHHHHHC-CCEEecCCCeEEEeeeEECCHHHcCCCCEEEEeC
Confidence 35788898873 2 233344443 346 8888885444333321 2222110 00111 23358888743
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCEEEEEccc
Q 025363 165 VLTTWTDDECKLIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 165 vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d~~ 197 (254)
+......+++.+...++|+..++..-.-
T Consensus 79 -----k~~~~~~~~~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 79 -----KAPALESVAAGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp -----CHHHHHHHHGGGSSSCCTTCEEEECCSS
T ss_pred -----CchhHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3445667888888888888877764433
No 455
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=44.34 E-value=94 Score=22.96 Aligned_cols=135 Identities=10% Similarity=-0.003 Sum_probs=66.9
Q ss_pred eEEEecCcccHHHHHHHHHc---CCCCeEEEeec-hH-HHhhCC-CCCCcEEEeCCCCCC--C----CCccEEEeccccc
Q 025363 100 RLVDVGGSAGDCLRMILQKH---RFICEGINFDL-PE-VVAEAP-SIPGVTHIGGDMFKS--I----PAADAIFMKWVLT 167 (254)
Q Consensus 100 ~vlDvG~G~G~~~~~l~~~~---~~~~~~~~~D~-~~-~~~~~~-~~~~i~~~~~d~~~~--~----p~~D~v~~~~vlh 167 (254)
+||=.| |+|..+..+++.+ .+.+ +++++. ++ -++... ...++.++.+|+.+. + ...|+++..-...
T Consensus 7 ~vlVtG-asg~iG~~~~~~l~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 7 YITILG-AAGQIAQXLTATLLTYTDMH-ITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp EEEEES-TTSHHHHHHHHHHHHHCCCE-EEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEe-CCcHHHHHHHHHHHhcCCce-EEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 366665 4555555555432 3556 888887 44 333221 236799999999864 2 2238888655432
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEEccccCCCCCChhhhhhcccchHhhhhccccC-ceecCHHHHHHHHHhCCCCee
Q 025363 168 TWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAK-GNHRTEQEFKQLGFFAGFPHL 246 (254)
Q Consensus 168 ~~~~~~~~~il~~~~~~L~pgG~l~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~e~~~ll~~aGf~~~ 246 (254)
++ + ...+++.+.+. ..|+++..-.............. .... ... ....+......++++.|+...
T Consensus 85 n~--~-~~~~~~~~~~~--~~~~iv~iSs~~~~~~~~~~~~~---~~~~------~~~~~y~~~K~~~e~~~~~~~i~~~ 150 (221)
T 3r6d_A 85 GS--D-MASIVKALSRX--NIRRVIGVSMAGLSGEFPVALEK---WTFD------NLPISYVQGERQARNVLRESNLNYT 150 (221)
T ss_dssp HH--H-HHHHHHHHHHT--TCCEEEEEEETTTTSCSCHHHHH---HHHH------TSCHHHHHHHHHHHHHHHHSCSEEE
T ss_pred Ch--h-HHHHHHHHHhc--CCCeEEEEeeceecCCCCccccc---cccc------ccccHHHHHHHHHHHHHHhCCCCEE
Confidence 22 1 44444444432 23577655443322111111000 0000 000 111244566778888888766
Q ss_pred eEEE
Q 025363 247 RLYR 250 (254)
Q Consensus 247 ~~~~ 250 (254)
-+.+
T Consensus 151 ~vrp 154 (221)
T 3r6d_A 151 ILRL 154 (221)
T ss_dssp EEEE
T ss_pred EEec
Confidence 5554
No 456
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=44.32 E-value=32 Score=29.25 Aligned_cols=92 Identities=12% Similarity=0.051 Sum_probs=47.2
Q ss_pred eEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------------------CCcEEEeCCCCCCCCCc
Q 025363 100 RLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSI-------------------PGVTHIGGDMFKSIPAA 157 (254)
Q Consensus 100 ~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------------------~~i~~~~~d~~~~~p~~ 157 (254)
+|.=||+|. |. ++..|++. +.+ ++++|. ++.++...+. .++.+. .|..+...++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~--G~~-V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t-~~~~~~~~~a 77 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR--GHE-VIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGT-TDFKKAVLDS 77 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCE-EEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SCHHHHHHTC
T ss_pred EEEEECCCHHHHHHHHHHHHC--CCE-EEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEe-CCHHHHhccC
Confidence 567788774 33 33334443 346 899998 6665554331 123321 1211112335
Q ss_pred cEEEecccccc-----CCHHHHHHHHHHHHHhCCCC--CEEEEEc
Q 025363 158 DAIFMKWVLTT-----WTDDECKLIMENCYKALPAG--GKLIACE 195 (254)
Q Consensus 158 D~v~~~~vlh~-----~~~~~~~~il~~~~~~L~pg--G~l~i~d 195 (254)
|+|++.---.. .+-....++++.+.+.|+|. |.+++..
T Consensus 78 DvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~ 122 (436)
T 1mv8_A 78 DVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVR 122 (436)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEEC
T ss_pred CEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEe
Confidence 88886432111 00012567888999999882 4455544
No 457
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=44.15 E-value=44 Score=28.83 Aligned_cols=96 Identities=13% Similarity=-0.001 Sum_probs=52.8
Q ss_pred HHHHhhcCCCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEec
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMK 163 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~ 163 (254)
+.+.+..+..-.+++|+=+|.|. |......++.+ +.+ +++.|. |.....+.. ..+.+. ++.+-+..+|+|+..
T Consensus 235 dgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-Ga~-Viv~d~dp~~a~~A~~-~G~~vv--~LeElL~~ADIVv~a 309 (464)
T 3n58_A 235 DGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-GAR-VKVTEVDPICALQAAM-DGFEVV--TLDDAASTADIVVTT 309 (464)
T ss_dssp HHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-TCE-EEEECSSHHHHHHHHH-TTCEEC--CHHHHGGGCSEEEEC
T ss_pred HHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHC-CCE-EEEEeCCcchhhHHHh-cCceec--cHHHHHhhCCEEEEC
Confidence 34444433233578899998773 55555556555 567 999987 433222211 233332 332225567998863
Q ss_pred cc-cccCCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 164 WV-LTTWTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 164 ~v-lh~~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
-- -|.++ ++..+.||||+.|+-.
T Consensus 310 tgt~~lI~--------~e~l~~MK~GAILINv 333 (464)
T 3n58_A 310 TGNKDVIT--------IDHMRKMKDMCIVGNI 333 (464)
T ss_dssp CSSSSSBC--------HHHHHHSCTTEEEEEC
T ss_pred CCCccccC--------HHHHhcCCCCeEEEEc
Confidence 21 12222 4566779999877643
No 458
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=43.84 E-value=1.6 Score=36.75 Aligned_cols=95 Identities=13% Similarity=0.129 Sum_probs=49.1
Q ss_pred CCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC-C-CCcEEEeC---CCCCCCCCccEEEeccccccC
Q 025363 97 GVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPS-I-PGVTHIGG---DMFKSIPAADAIFMKWVLTTW 169 (254)
Q Consensus 97 ~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~-~-~~i~~~~~---d~~~~~p~~D~v~~~~vlh~~ 169 (254)
++.+|+=+|+| .|..+...++.+. .+ ++++|. ++-.+.+++ . ..+..... ++.+.+..+|+|+..--.-.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~G-a~-V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~- 243 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMG-AT-VTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG- 243 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CE-EEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CE-EEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC-
Confidence 36789999875 4555666666654 47 999997 554443322 1 22222111 11011223599886321110
Q ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 170 TDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 170 ~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
. +...-+.++..+.|||||.++-+-
T Consensus 244 ~-~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 244 A-KAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp S-CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred C-CCcceecHHHHhcCCCCcEEEEEe
Confidence 0 000112356667899999877543
No 459
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=43.82 E-value=63 Score=26.71 Aligned_cols=85 Identities=12% Similarity=0.121 Sum_probs=46.8
Q ss_pred CCeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCc---cEEEeccccccCCH
Q 025363 98 VKRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAA---DAIFMKWVLTTWTD 171 (254)
Q Consensus 98 ~~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~---D~v~~~~vlh~~~~ 171 (254)
..+|.=||+|. |. ++..|++. +.+ ++++|. ++..+...+. .+.. ..|..+....+ |+|++.- ++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~--G~~-V~v~dr~~~~~~~l~~~-g~~~-~~s~~e~~~~a~~~DvVi~~v-----p~ 91 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG--GHE-CVVYDLNVNAVQALERE-GIAG-ARSIEEFCAKLVKPRVVWLMV-----PA 91 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCE-EEEECSCHHHHHHHHTT-TCBC-CSSHHHHHHHSCSSCEEEECS-----CG
T ss_pred CCEEEEECchHHHHHHHHHHHhC--CCE-EEEEeCCHHHHHHHHHC-CCEE-eCCHHHHHhcCCCCCEEEEeC-----CH
Confidence 46788888762 22 23333333 356 899998 6665554432 2221 11111111223 8887633 33
Q ss_pred HHHHHHHHHHHHhCCCCCEEE
Q 025363 172 DECKLIMENCYKALPAGGKLI 192 (254)
Q Consensus 172 ~~~~~il~~~~~~L~pgG~l~ 192 (254)
.....+++.+...|+||..++
T Consensus 92 ~~v~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 92 AVVDSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp GGHHHHHHHHGGGCCTTCEEE
T ss_pred HHHHHHHHHHHhhCCCCCEEE
Confidence 356678889999998876544
No 460
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=42.95 E-value=1.1e+02 Score=24.72 Aligned_cols=94 Identities=14% Similarity=0.071 Sum_probs=48.1
Q ss_pred CCeEEEecCcccHHHHH--HHHHcCCCCeEEEeec-hHHHhh-CC------C-C-CCcEEEeCCCCCCCCCccEEEeccc
Q 025363 98 VKRLVDVGGSAGDCLRM--ILQKHRFICEGINFDL-PEVVAE-AP------S-I-PGVTHIGGDMFKSIPAADAIFMKWV 165 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~--l~~~~~~~~~~~~~D~-~~~~~~-~~------~-~-~~i~~~~~d~~~~~p~~D~v~~~~v 165 (254)
..+|.=||+|.-..+.. ++......+ ++++|+ ++.++. +. . . .++++.. |-.+.+.++|+|++.--
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~e-i~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDE-LVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-GEYSDCHDADLVVICAG 83 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSE-EEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-CCGGGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCE-EEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-CCHHHhCCCCEEEECCC
Confidence 46888899865443333 232211125 888997 432221 10 0 1 3455554 33333666799887553
Q ss_pred cccCCH-----------HHHHHHHHHHHHhCCCCCEEEEE
Q 025363 166 LTTWTD-----------DECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 166 lh~~~~-----------~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
.-.-+. .-..++.+.+.+. .|++++++.
T Consensus 84 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (317)
T 3d0o_A 84 AAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVA 122 (317)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEEC
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 322111 1123344444444 799998884
No 461
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=42.66 E-value=1.6e+02 Score=25.26 Aligned_cols=90 Identities=12% Similarity=-0.002 Sum_probs=53.0
Q ss_pred CCeEEEecCcc--cHHHHHHHHHcCCCCeEEEeec-hHH--------HhhCCCC------------CCcEEEeCCCCCCC
Q 025363 98 VKRLVDVGGSA--GDCLRMILQKHRFICEGINFDL-PEV--------VAEAPSI------------PGVTHIGGDMFKSI 154 (254)
Q Consensus 98 ~~~vlDvG~G~--G~~~~~l~~~~~~~~~~~~~D~-~~~--------~~~~~~~------------~~i~~~~~d~~~~~ 154 (254)
-.+|.=||+|. +..+..++++ +.+ ++++|. ++- ++...+. .++++. .|. +.+
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a--G~~-V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl-~al 128 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA--GIE-TFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDF-HKL 128 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCE-EEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCG-GGC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCe-EEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCH-HHH
Confidence 46788899885 3344444444 567 999998 541 1111010 355553 343 235
Q ss_pred CCccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 155 PAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 155 p~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
.++|+||..-.- ..+-...+++++.+.++|+..|+...
T Consensus 129 ~~aDlVIeAVpe---~~~vk~~v~~~l~~~~~~~aIlasnT 166 (460)
T 3k6j_A 129 SNCDLIVESVIE---DMKLKKELFANLENICKSTCIFGTNT 166 (460)
T ss_dssp TTCSEEEECCCS---CHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred ccCCEEEEcCCC---CHHHHHHHHHHHHhhCCCCCEEEecC
Confidence 557998874421 11334578899999999987765433
No 462
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=42.61 E-value=66 Score=25.97 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=51.8
Q ss_pred CCeEEEecCcccHHHHHHHHHcCC-CCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC--C-----CCccEEEecccccc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRF-ICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--I-----PAADAIFMKWVLTT 168 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~-~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~--~-----p~~D~v~~~~vlh~ 168 (254)
..+++=+|+ |..+..+++.... .. ++++|. ++.++ .++ ..+.++.||..++ + .++|.+++.- .
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~--~- 186 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDL--E- 186 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-TTCEEEESCTTSHHHHHHTCSTTEEEEEECC--S-
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-CCcEEEEeCCCCHHHHHhcChhhccEEEEcC--C-
Confidence 346777775 6777777776532 23 666787 66665 433 5788999999775 2 2247766532 1
Q ss_pred CCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 169 WTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 169 ~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
+|+.. .......+.+.|..+++.
T Consensus 187 -~d~~n-~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 187 -SDSET-IHCILGIRKIDESVRIIA 209 (336)
T ss_dssp -SHHHH-HHHHHHHHTTCTTSEEEE
T ss_pred -ccHHH-HHHHHHHHHHCCCCeEEE
Confidence 23333 334455556778777665
No 463
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=42.56 E-value=1.2e+02 Score=23.80 Aligned_cols=97 Identities=9% Similarity=-0.022 Sum_probs=55.1
Q ss_pred CCeEEEecCccc----H-HHHHHHHHcCCCCeEEEeec-hHHHhhCC----CCCCcEEEeCCCCCC--CC----------
Q 025363 98 VKRLVDVGGSAG----D-CLRMILQKHRFICEGINFDL-PEVVAEAP----SIPGVTHIGGDMFKS--IP---------- 155 (254)
Q Consensus 98 ~~~vlDvG~G~G----~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~----~~~~i~~~~~d~~~~--~p---------- 155 (254)
++++|=.|++.| . .+..|+++ +.+ +++.+. +...+..+ ...++.++..|+.+. +.
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~--G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREA--GAE-LAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHT--TCE-EEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHC--CCE-EEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 567887886533 2 34444444 456 777776 32222111 125688889998775 21
Q ss_pred Cc-cEEEecccc----------ccCCHHHHH-----------HHHHHHHHhCCCCCEEEEEccc
Q 025363 156 AA-DAIFMKWVL----------TTWTDDECK-----------LIMENCYKALPAGGKLIACEPV 197 (254)
Q Consensus 156 ~~-D~v~~~~vl----------h~~~~~~~~-----------~il~~~~~~L~pgG~l~i~d~~ 197 (254)
.. |+++..-.+ ...+.++.. .+++.+.+.|+.+|+++.+-..
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~ 171 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY 171 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence 12 777754332 233333322 3567777888888988876543
No 464
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=42.52 E-value=91 Score=25.49 Aligned_cols=95 Identities=14% Similarity=0.073 Sum_probs=48.4
Q ss_pred CCCeEEEecCcc-cHHHH-HHHHHcCCC-CeEEEeec-hHHHhh-------CCCC-CCcEEE-eCCCCCCCCCccEEEec
Q 025363 97 GVKRLVDVGGSA-GDCLR-MILQKHRFI-CEGINFDL-PEVVAE-------APSI-PGVTHI-GGDMFKSIPAADAIFMK 163 (254)
Q Consensus 97 ~~~~vlDvG~G~-G~~~~-~l~~~~~~~-~~~~~~D~-~~~~~~-------~~~~-~~i~~~-~~d~~~~~p~~D~v~~~ 163 (254)
+..+|.=||+|. |.... .++.. +-. + ++.+|. ++..+. .... ...... ..|.. ++.++|+|++.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-g~~~e-v~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-~~~daDiVIit 96 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-DLADE-VALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS-VSAGSKLVVIT 96 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-CCCSE-EEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC-SCSSCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCCCe-EEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH-HhCCCCEEEEe
Confidence 567899999864 32222 23333 222 5 888897 432221 1011 122222 34553 46667998864
Q ss_pred ccccc-----------CCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 164 WVLTT-----------WTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 164 ~vlh~-----------~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
.-.-. .+-+-...+.+++.+. .|++++++..
T Consensus 97 aG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvt 138 (330)
T 3ldh_A 97 AGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHP 138 (330)
T ss_dssp CSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred CCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCC
Confidence 22211 0112234455666666 7999888754
No 465
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=41.72 E-value=66 Score=25.46 Aligned_cols=85 Identities=14% Similarity=0.149 Sum_probs=46.8
Q ss_pred CeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHHHH
Q 025363 99 KRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECK 175 (254)
Q Consensus 99 ~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~~ 175 (254)
.+|.=||+|. |. ++..+++. +.+ ++++|. ++..+...+. .+... .|..+....+|+|++.-. .+....
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~--G~~-V~~~d~~~~~~~~~~~~-g~~~~-~~~~~~~~~aDvvi~~vp----~~~~~~ 74 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA--GYL-LNVFDLVQSAVDGLVAA-GASAA-RSARDAVQGADVVISMLP----ASQHVE 74 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCE-EEEECSSHHHHHHHHHT-TCEEC-SSHHHHHTTCSEEEECCS----CHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhC--CCe-EEEEcCCHHHHHHHHHC-CCeEc-CCHHHHHhCCCeEEEECC----CHHHHH
Confidence 4788888874 32 33334443 446 899998 6655544332 23321 111111334598886331 234556
Q ss_pred HHHH---HHHHhCCCCCEEE
Q 025363 176 LIME---NCYKALPAGGKLI 192 (254)
Q Consensus 176 ~il~---~~~~~L~pgG~l~ 192 (254)
.++. .+...++||..++
T Consensus 75 ~v~~~~~~~~~~l~~~~~vi 94 (302)
T 2h78_A 75 GLYLDDDGLLAHIAPGTLVL 94 (302)
T ss_dssp HHHHSSSCGGGSSCSSCEEE
T ss_pred HHHcCchhHHhcCCCCcEEE
Confidence 6776 7777888876543
No 466
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=41.55 E-value=64 Score=27.69 Aligned_cols=94 Identities=13% Similarity=0.048 Sum_probs=50.1
Q ss_pred CeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------------------CCcEEEeCCCCCCCCCc
Q 025363 99 KRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSI------------------PGVTHIGGDMFKSIPAA 157 (254)
Q Consensus 99 ~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------------------~~i~~~~~d~~~~~p~~ 157 (254)
++|.=||+|. |. ++..|++..++.+ ++++|. ++.++..++. .++.+ ..|..+...++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~-V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~~a 83 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIR-VTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIKEA 83 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSE-EEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHHHC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCE-EEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHhcC
Confidence 5788888874 33 4445666544567 999998 6666554321 11222 11111112235
Q ss_pred cEEEecc--cccc--------CCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 158 DAIFMKW--VLTT--------WTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 158 D~v~~~~--vlh~--------~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
|+|++.- -.+. .+-.....+++.+.+.|+||.. ++..
T Consensus 84 DvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~i-VV~~ 130 (467)
T 2q3e_A 84 DLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKI-VTEK 130 (467)
T ss_dssp SEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEE-EEEC
T ss_pred CEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCE-EEEC
Confidence 8888642 2211 1112245677888888887654 4443
No 467
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=41.37 E-value=1.2e+02 Score=24.48 Aligned_cols=92 Identities=14% Similarity=0.053 Sum_probs=46.7
Q ss_pred eEEEecCcccH--HHHHHHHHcCCCCeEEEeec-hHHHhhCCC--------CCCcEEEeCCCCCCCCCccEEEecccccc
Q 025363 100 RLVDVGGSAGD--CLRMILQKHRFICEGINFDL-PEVVAEAPS--------IPGVTHIGGDMFKSIPAADAIFMKWVLTT 168 (254)
Q Consensus 100 ~vlDvG~G~G~--~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~--------~~~i~~~~~d~~~~~p~~D~v~~~~vlh~ 168 (254)
+|.=||+|.=. ++..+++.....+ ++++|. ++.++.... .....+...| .+.+.++|+|++.--...
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~-V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFARE-MVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSE-EEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCe-EEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 57778876322 2333333322115 888998 544333211 0123333334 233555699887554432
Q ss_pred CC---HH--------HHHHHHHHHHHhCCCCCEEEEE
Q 025363 169 WT---DD--------ECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 169 ~~---~~--------~~~~il~~~~~~L~pgG~l~i~ 194 (254)
.+ .. -..++++.+.+. .|++.+++.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~~ 115 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVV 115 (319)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEe
Confidence 21 11 134566666666 488887774
No 468
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=41.17 E-value=46 Score=28.91 Aligned_cols=83 Identities=10% Similarity=-0.051 Sum_probs=46.2
Q ss_pred CCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEecc-ccccCCHHH
Q 025363 97 GVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKW-VLTTWTDDE 173 (254)
Q Consensus 97 ~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~-vlh~~~~~~ 173 (254)
.+++|.=||.| .|......++.+ +.+ ++++|. +.....+.. ..+.+ .++.+-+..+|+|++.- .-+.++
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~~-G~~-Viv~d~~~~~~~~a~~-~g~~~--~~l~ell~~aDiVi~~~~t~~lI~--- 327 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKGL-GAR-VYITEIDPICAIQAVM-EGFNV--VTLDEIVDKGDFFITCTGNVDVIK--- 327 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHH-TCE-EEEECSCHHHHHHHHT-TTCEE--CCHHHHTTTCSEEEECCSSSSSBC---
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-cCE-EEEEeCChhhHHHHHH-cCCEe--cCHHHHHhcCCEEEECCChhhhcC---
Confidence 46788888865 444444445555 567 999998 443212211 22332 23222256679988763 222222
Q ss_pred HHHHHHHHHHhCCCCCEEE
Q 025363 174 CKLIMENCYKALPAGGKLI 192 (254)
Q Consensus 174 ~~~il~~~~~~L~pgG~l~ 192 (254)
++..+.||||..|+
T Consensus 328 -----~~~l~~MK~gaili 341 (479)
T 1v8b_A 328 -----LEHLLKMKNNAVVG 341 (479)
T ss_dssp -----HHHHTTCCTTCEEE
T ss_pred -----HHHHhhcCCCcEEE
Confidence 24556799988665
No 469
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=39.97 E-value=84 Score=25.53 Aligned_cols=97 Identities=10% Similarity=0.074 Sum_probs=48.2
Q ss_pred CCCCeEEEecCcccHHH-HHHHHHcCCC-CeEEEeec-hHHHhh-CC---CC----CCcEEEeCCCCCCCCCccEEEecc
Q 025363 96 KGVKRLVDVGGSAGDCL-RMILQKHRFI-CEGINFDL-PEVVAE-AP---SI----PGVTHIGGDMFKSIPAADAIFMKW 164 (254)
Q Consensus 96 ~~~~~vlDvG~G~G~~~-~~l~~~~~~~-~~~~~~D~-~~~~~~-~~---~~----~~i~~~~~d~~~~~p~~D~v~~~~ 164 (254)
++..+|.=||+|.=..+ ...+...+.. + ++++|+ ++.++. +. .. .++++..++ .+.+.++|+|++.-
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~e-l~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~-~~a~~~aDvVii~a 84 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQE-IGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAE-YSDAKDADLVVITA 84 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSE-EEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-GGGGGGCSEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCE-EEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECC-HHHhCCCCEEEEcC
Confidence 44578999998643332 2223222322 4 888897 433221 11 11 355555532 33356679998765
Q ss_pred ccccCCHH-------HHHHHHHHHHHhC---CCCCEEEEE
Q 025363 165 VLTTWTDD-------ECKLIMENCYKAL---PAGGKLIAC 194 (254)
Q Consensus 165 vlh~~~~~-------~~~~il~~~~~~L---~pgG~l~i~ 194 (254)
-.-.-+.. ....+++.+.+.+ .|++++++.
T Consensus 85 g~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 124 (326)
T 2zqz_A 85 GAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA 124 (326)
T ss_dssp CCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 43221110 1123444443322 699999885
No 470
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=39.70 E-value=75 Score=25.88 Aligned_cols=92 Identities=10% Similarity=0.066 Sum_probs=49.9
Q ss_pred CCCCCCeEEEecC--cccHHHHHHHHHcCCCCeEEEeec-h---HHHhhCCCCCCcEEEeC------CCCCCCC---Ccc
Q 025363 94 GFKGVKRLVDVGG--SAGDCLRMILQKHRFICEGINFDL-P---EVVAEAPSIPGVTHIGG------DMFKSIP---AAD 158 (254)
Q Consensus 94 ~~~~~~~vlDvG~--G~G~~~~~l~~~~~~~~~~~~~D~-~---~~~~~~~~~~~i~~~~~------d~~~~~p---~~D 158 (254)
...++.+||=+|+ |.|.++..+++.. +++.++..+. + +-.+.+++..--.++.. ++.+... ..|
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~D 242 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPR 242 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCS
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCce
Confidence 4678899999985 6889999999886 4441334433 2 11222222211111111 1111111 237
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 159 AIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 159 ~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
+|+-.- ..+. +.+..++|+|||++++.-
T Consensus 243 vvid~~-----g~~~----~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 243 LALNCV-----GGKS----STELLRQLARGGTMVTYG 270 (357)
T ss_dssp EEEESS-----CHHH----HHHHHTTSCTTCEEEECC
T ss_pred EEEECC-----CcHH----HHHHHHhhCCCCEEEEEe
Confidence 776422 2221 245779999999998864
No 471
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=39.22 E-value=45 Score=26.85 Aligned_cols=90 Identities=13% Similarity=0.081 Sum_probs=47.8
Q ss_pred CCCeEEEecCcc-c-HHHHHHHHHcCCCCeEEEeechHHHhhCCCC------CCcEEE-----eCCCCCCCCCccEEEec
Q 025363 97 GVKRLVDVGGSA-G-DCLRMILQKHRFICEGINFDLPEVVAEAPSI------PGVTHI-----GGDMFKSIPAADAIFMK 163 (254)
Q Consensus 97 ~~~~vlDvG~G~-G-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~------~~i~~~-----~~d~~~~~p~~D~v~~~ 163 (254)
...+|.=||+|. | .++..|++. +.. ++++-.++..+..++. +...+. ..|. +....+|+|++.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~--G~~-V~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vila 93 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA--GHE-VILIARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLVLFC 93 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT--TCE-EEEECCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEEEEC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC--CCe-EEEEEcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEEEEE
Confidence 356899998873 2 333444443 335 6666225554444321 111110 1111 113345988874
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 164 WVLTTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 164 ~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
--- .....+++.+...++|+..++..-
T Consensus 94 vk~-----~~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 94 VKS-----TDTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp CCG-----GGHHHHHHHHTTTSCTTCEEEEEC
T ss_pred ccc-----ccHHHHHHHHHHhcCCCCEEEEeC
Confidence 422 345688899999999988776543
No 472
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=38.58 E-value=61 Score=26.29 Aligned_cols=89 Identities=10% Similarity=-0.006 Sum_probs=51.0
Q ss_pred CCeEEEecCcc--cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------------------------CCcEEEeCCC
Q 025363 98 VKRLVDVGGSA--GDCLRMILQKHRFICEGINFDL-PEVVAEAPSI------------------------PGVTHIGGDM 150 (254)
Q Consensus 98 ~~~vlDvG~G~--G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------------------------~~i~~~~~d~ 150 (254)
..+|.=||+|. +..+..++++ +.+ ++++|. ++.++.+.+. .++++. .|.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~--G~~-V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~ 81 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFR-VKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNL 81 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCC-EEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC--CCE-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCH
Confidence 35788888874 3344444444 567 999998 7665554210 134443 222
Q ss_pred CCCCCCccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 151 FKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 151 ~~~~p~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
.+...++|+|+..-.- ..+-...+++++.+.++|+..|+.
T Consensus 82 ~eav~~aDlVieavpe---~~~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 82 AEAVEGVVHIQECVPE---NLDLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp HHHTTTEEEEEECCCS---CHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred HHHHhcCCEEEEeccC---CHHHHHHHHHHHHhhCCCCeEEEE
Confidence 2124456988874321 112345788999999998875543
No 473
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=38.58 E-value=65 Score=29.87 Aligned_cols=90 Identities=11% Similarity=0.124 Sum_probs=54.6
Q ss_pred CCCCCCeEEEec--CcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEE---eCCCCCCC-----CCc-cEEEe
Q 025363 94 GFKGVKRLVDVG--GSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHI---GGDMFKSI-----PAA-DAIFM 162 (254)
Q Consensus 94 ~~~~~~~vlDvG--~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~---~~d~~~~~-----p~~-D~v~~ 162 (254)
..+++.+||=.| ||.|..+.++++.. +.+ +++.+.++-.+..+ ...-.+. ..|+.+.+ +.+ |+|+-
T Consensus 342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~-Ga~-V~~t~~~~k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld 418 (795)
T 3slk_A 342 GLRPGESLLVHSAAGGVGMAAIQLARHL-GAE-VYATASEDKWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLN 418 (795)
T ss_dssp CCCTTCCEEEESTTBHHHHHHHHHHHHT-TCC-EEEECCGGGGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEE
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHc-CCE-EEEEeChHHhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEE
Confidence 466788999998 57899999999886 457 88777644222222 1111111 11211111 123 88886
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 163 KWVLTTWTDDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 163 ~~vlh~~~~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
.-. . ..++...++|+|+|+++.+-
T Consensus 419 ~~g-----g----~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 419 SLA-----G----EFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp CCC-----T----TTTHHHHTSCTTCEEEEECC
T ss_pred CCC-----c----HHHHHHHHHhcCCCEEEEec
Confidence 321 1 24578889999999998864
No 474
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=38.18 E-value=1.1e+02 Score=24.72 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=46.1
Q ss_pred CCCeEEEec-Ccc-cHHHHHHHHHcCC-CCeEEEeec-hH---HHhhCCCC-C-CcEEEeC--CCCCCCCCccEEEeccc
Q 025363 97 GVKRLVDVG-GSA-GDCLRMILQKHRF-ICEGINFDL-PE---VVAEAPSI-P-GVTHIGG--DMFKSIPAADAIFMKWV 165 (254)
Q Consensus 97 ~~~~vlDvG-~G~-G~~~~~l~~~~~~-~~~~~~~D~-~~---~~~~~~~~-~-~i~~~~~--d~~~~~p~~D~v~~~~v 165 (254)
...+|+=+| +|. |......+...+. .+ ++++|+ ++ +.+..... + ++..+.+ |..+.+.++|+|+..-.
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~e-v~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSV-LHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEE-EEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCE-EEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 346899999 565 6655554444321 34 778886 43 11111111 1 3333222 22222445698887543
Q ss_pred cccCCH-----------HHHHHHHHHHHHhCCCCCEEEEE
Q 025363 166 LTTWTD-----------DECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 166 lh~~~~-----------~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
...-+. +-...+.+.+.+. .|.+++++.
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~ 124 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLI 124 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEE
Confidence 322110 1233444444444 478888884
No 475
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=37.83 E-value=64 Score=24.93 Aligned_cols=66 Identities=9% Similarity=-0.025 Sum_probs=41.0
Q ss_pred CCCeEEEecCc--ccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHHH
Q 025363 97 GVKRLVDVGGS--AGDCLRMILQKHRFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDEC 174 (254)
Q Consensus 97 ~~~~vlDvG~G--~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~ 174 (254)
+.++|.=||.| .+.++..|.++ +.+ ++++|.++ ....+| +++ .++...
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~--G~~-V~~~~~~~--------------------~~~~aD-ila------vP~~ai 54 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSV--GHY-VTVLHAPE--------------------DIRDFE-LVV------IDAHGV 54 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHT--TCE-EEECSSGG--------------------GGGGCS-EEE------ECSSCH
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHC--CCE-EEEecCHH--------------------HhccCC-EEE------EcHHHH
Confidence 34688888887 35566666665 446 88887631 122236 443 233455
Q ss_pred HHHHHHHHHhCCCCCEEE
Q 025363 175 KLIMENCYKALPAGGKLI 192 (254)
Q Consensus 175 ~~il~~~~~~L~pgG~l~ 192 (254)
..+++++...++||..++
T Consensus 55 ~~vl~~l~~~l~~g~ivv 72 (232)
T 3dfu_A 55 EGYVEKLSAFARRGQMFL 72 (232)
T ss_dssp HHHHHHHHTTCCTTCEEE
T ss_pred HHHHHHHHHhcCCCCEEE
Confidence 678888888888876543
No 476
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=37.79 E-value=68 Score=25.75 Aligned_cols=96 Identities=15% Similarity=0.117 Sum_probs=49.2
Q ss_pred eEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhh-CCC--------CCCcEEEeCCCCCCCCCccEEEecccccc
Q 025363 100 RLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAE-APS--------IPGVTHIGGDMFKSIPAADAIFMKWVLTT 168 (254)
Q Consensus 100 ~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~-~~~--------~~~i~~~~~d~~~~~p~~D~v~~~~vlh~ 168 (254)
+|.=||+| -|.....++...+-+..++++|+ +...+. +.+ .........+-.+.+.++|+|++..-.-.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~pr 81 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLAR 81 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCCC
Confidence 56667764 35555544444444433888998 432211 110 02233333322234566799888655443
Q ss_pred CC---HHH----HHHHHHHHHHhC---CCCCEEEEEc
Q 025363 169 WT---DDE----CKLIMENCYKAL---PAGGKLIACE 195 (254)
Q Consensus 169 ~~---~~~----~~~il~~~~~~L---~pgG~l~i~d 195 (254)
-+ ..+ ..++++.+.+.+ .|++.+++..
T Consensus 82 kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs 118 (294)
T 2x0j_A 82 KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 32 211 345555555544 4788887753
No 477
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=37.76 E-value=69 Score=25.40 Aligned_cols=86 Identities=14% Similarity=0.112 Sum_probs=47.3
Q ss_pred CCeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHHH
Q 025363 98 VKRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDEC 174 (254)
Q Consensus 98 ~~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~ 174 (254)
..+|.=||+|. |. .+..+++. +.+ ++++|. ++..+...+ ..+.+. .|..+-.. +|+|++.-. ++...
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~--G~~-V~~~dr~~~~~~~~~~-~g~~~~-~~~~~~~~-aDvvi~~vp----~~~~~ 84 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW--PGG-VTVYDIRIEAMTPLAE-AGATLA-DSVADVAA-ADLIHITVL----DDAQV 84 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS--TTC-EEEECSSTTTSHHHHH-TTCEEC-SSHHHHTT-SSEEEECCS----SHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHC--CCe-EEEEeCCHHHHHHHHH-CCCEEc-CCHHHHHh-CCEEEEECC----ChHHH
Confidence 35788888763 22 22223322 456 899997 554433322 233321 12211134 688886331 13456
Q ss_pred HHHHHHHHHhCCCCCEEEE
Q 025363 175 KLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 175 ~~il~~~~~~L~pgG~l~i 193 (254)
..+++.+...++||..++-
T Consensus 85 ~~v~~~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 85 REVVGELAGHAKPGTVIAI 103 (296)
T ss_dssp HHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHHhcCCCCEEEE
Confidence 7788999999998875544
No 478
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=37.64 E-value=59 Score=27.86 Aligned_cols=79 Identities=13% Similarity=-0.013 Sum_probs=45.4
Q ss_pred CCeEEEecCcccHHHHH-HHHHcCCCCeEEEeec---hHHHhhCCCCCCcEEEeCCCCCC-CCCccEEEeccccccCCHH
Q 025363 98 VKRLVDVGGSAGDCLRM-ILQKHRFICEGINFDL---PEVVAEAPSIPGVTHIGGDMFKS-IPAADAIFMKWVLTTWTDD 172 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~-l~~~~~~~~~~~~~D~---~~~~~~~~~~~~i~~~~~d~~~~-~p~~D~v~~~~vlh~~~~~ 172 (254)
+++||=||+|.-..... ++.. .+.+ ++++|. ++..+.. +..+++++.+.+... +.++|+|+..--. ++
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~-~ga~-V~vi~~~~~~~~~~l~-~~~~i~~~~~~~~~~~l~~~~lVi~at~~----~~ 84 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLE-AGAR-LTVNALTFIPQFTVWA-NEGMLTLVEGPFDETLLDSCWLAIAATDD----DT 84 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTBE-EEEEESSCCHHHHHHH-TTTSCEEEESSCCGGGGTTCSEEEECCSC----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CcCE-EEEEcCCCCHHHHHHH-hcCCEEEEECCCCccccCCccEEEEcCCC----HH
Confidence 67899999985444333 3333 2456 777774 3332222 225788988877654 5556888874321 12
Q ss_pred HHHHHHHHHHH
Q 025363 173 ECKLIMENCYK 183 (254)
Q Consensus 173 ~~~~il~~~~~ 183 (254)
-...+.+.+++
T Consensus 85 ~n~~i~~~a~~ 95 (457)
T 1pjq_A 85 VNQRVSDAAES 95 (457)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 24455555554
No 479
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=37.58 E-value=7.3 Score=30.28 Aligned_cols=87 Identities=16% Similarity=0.129 Sum_probs=44.2
Q ss_pred CeEEEecCcc--cHHHHHHHHHc--CCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHH
Q 025363 99 KRLVDVGGSA--GDCLRMILQKH--RFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDE 173 (254)
Q Consensus 99 ~~vlDvG~G~--G~~~~~l~~~~--~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~ 173 (254)
.+|.=||+|. +.++..+++.. +..+ ++++|. ++..+...+...+... .|..+....+|+|++.- ++..
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~-V~~~~r~~~~~~~~~~~~g~~~~-~~~~e~~~~aDvVilav-----~~~~ 75 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQ-IICSDLNTANLKNASEKYGLTTT-TDNNEVAKNADILILSI-----KPDL 75 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGG-EEEECSCHHHHHHHHHHHCCEEC-SCHHHHHHHCSEEEECS-----CTTT
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCe-EEEEeCCHHHHHHHHHHhCCEEe-CChHHHHHhCCEEEEEe-----CHHH
Confidence 4677788773 22344444431 1126 888998 6655544321123321 11111122359888744 3345
Q ss_pred HHHHHHHHHHhCCCCCEEE
Q 025363 174 CKLIMENCYKALPAGGKLI 192 (254)
Q Consensus 174 ~~~il~~~~~~L~pgG~l~ 192 (254)
...+++++...++||..++
T Consensus 76 ~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 76 YASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp HHHHC---CCSSCTTCEEE
T ss_pred HHHHHHHHHhhcCCCCEEE
Confidence 6678888888888776544
No 480
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=37.43 E-value=70 Score=27.73 Aligned_cols=65 Identities=11% Similarity=-0.041 Sum_probs=35.2
Q ss_pred CeEEEecCcc-cHHH---HHHHH--HcCCCCeEEEeec-hHHHhhCCC---------CCCcEEEe-CCCCCCCCCccEEE
Q 025363 99 KRLVDVGGSA-GDCL---RMILQ--KHRFICEGINFDL-PEVVAEAPS---------IPGVTHIG-GDMFKSIPAADAIF 161 (254)
Q Consensus 99 ~~vlDvG~G~-G~~~---~~l~~--~~~~~~~~~~~D~-~~~~~~~~~---------~~~i~~~~-~d~~~~~p~~D~v~ 161 (254)
.+|.=||+|+ |... ..+++ ..+..+ ++.+|+ ++.++.+.. ....++.. .|..+.+.++|+|+
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~~~l~~~e-V~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGST-VTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCGGGTTCE-EEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHhcCcCCCCE-EEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 5788999999 5332 23443 223456 899998 554333211 02333332 34323345569988
Q ss_pred ecc
Q 025363 162 MKW 164 (254)
Q Consensus 162 ~~~ 164 (254)
..-
T Consensus 83 iaa 85 (480)
T 1obb_A 83 NTA 85 (480)
T ss_dssp ECC
T ss_pred ECC
Confidence 754
No 481
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=37.37 E-value=1.8e+02 Score=25.16 Aligned_cols=86 Identities=10% Similarity=0.099 Sum_probs=46.2
Q ss_pred CeEEEecCcc--cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC--CCcEEE-eCCCCCC---CCCccEEEeccccccC
Q 025363 99 KRLVDVGGSA--GDCLRMILQKHRFICEGINFDL-PEVVAEAPSI--PGVTHI-GGDMFKS---IPAADAIFMKWVLTTW 169 (254)
Q Consensus 99 ~~vlDvG~G~--G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~--~~i~~~-~~d~~~~---~p~~D~v~~~~vlh~~ 169 (254)
.+|-=||.|. ..++..|+++ +.+ ++++|. ++..+...+. ....+. ..+..+. +..+|+|++.-
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~--G~~-V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~V----- 76 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH--GFV-VCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLV----- 76 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCC-EEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECS-----
T ss_pred CEEEEEChhHHHHHHHHHHHHC--CCE-EEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEec-----
Confidence 4677777652 2223333333 457 999998 6655543321 111221 1122111 12358887632
Q ss_pred CH-HHHHHHHHHHHHhCCCCCEEE
Q 025363 170 TD-DECKLIMENCYKALPAGGKLI 192 (254)
Q Consensus 170 ~~-~~~~~il~~~~~~L~pgG~l~ 192 (254)
++ .....+++++...|+||..++
T Consensus 77 p~~~~v~~vl~~l~~~L~~g~iII 100 (484)
T 4gwg_A 77 KAGQAVDDFIEKLVPLLDTGDIII 100 (484)
T ss_dssp CSSHHHHHHHHHHGGGCCTTCEEE
T ss_pred CChHHHHHHHHHHHHhcCCCCEEE
Confidence 33 456678899999999886543
No 482
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=36.81 E-value=1.5e+02 Score=23.39 Aligned_cols=82 Identities=16% Similarity=0.065 Sum_probs=44.7
Q ss_pred CCCeEEEecCcccHHHHH-HHHHcCCCCeEEEeec-h--HH---HhhCC----------------------CCCCc-EEE
Q 025363 97 GVKRLVDVGGSAGDCLRM-ILQKHRFICEGINFDL-P--EV---VAEAP----------------------SIPGV-THI 146 (254)
Q Consensus 97 ~~~~vlDvG~G~G~~~~~-l~~~~~~~~~~~~~D~-~--~~---~~~~~----------------------~~~~i-~~~ 146 (254)
.+++||=||||.-..... .+.. .+.+ +++++. . +. +.... ...++ .++
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~-~Ga~-VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~i 89 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMP-TGCK-LTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYEYI 89 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGG-GTCE-EEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHh-CCCE-EEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeEEE
Confidence 467899999886444333 2222 2456 777764 1 11 11111 22467 888
Q ss_pred eCCCCCC-CC------CccEEEeccccccCCHHHHHHHHHHHHHh
Q 025363 147 GGDMFKS-IP------AADAIFMKWVLTTWTDDECKLIMENCYKA 184 (254)
Q Consensus 147 ~~d~~~~-~p------~~D~v~~~~vlh~~~~~~~~~il~~~~~~ 184 (254)
.+++... +. .+|+|+..-- .++....+.+.+++.
T Consensus 90 ~~~~~~~dL~~l~~~~~adlViaat~----d~~~n~~I~~~Ar~~ 130 (274)
T 1kyq_A 90 RSDFKDEYLDLENENDAWYIIMTCIP----DHPESARIYHLCKER 130 (274)
T ss_dssp CSSCCGGGGCCSSTTCCEEEEEECCS----CHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHhhcccCCCeEEEEEcCC----ChHHHHHHHHHHHHh
Confidence 8776554 54 4588877542 123445556666554
No 483
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=36.81 E-value=62 Score=25.73 Aligned_cols=71 Identities=15% Similarity=-0.023 Sum_probs=39.6
Q ss_pred CeEEEec-Ccc--cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHHH
Q 025363 99 KRLVDVG-GSA--GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDEC 174 (254)
Q Consensus 99 ~~vlDvG-~G~--G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~ 174 (254)
.+|.=|| +|. +.++..+.+. +.+ ++++|. ++. +..+....+|+|++.- +....
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~--G~~-V~~~~~~~~~---------------~~~~~~~~aDvVilav-----p~~~~ 78 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS--GYP-ISILDREDWA---------------VAESILANADVVIVSV-----PINLT 78 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT--TCC-EEEECTTCGG---------------GHHHHHTTCSEEEECS-----CGGGH
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCe-EEEEECCccc---------------CHHHHhcCCCEEEEeC-----CHHHH
Confidence 4788887 652 2233333333 346 787875 220 1101123458888743 33446
Q ss_pred HHHHHHHHHhCCCCCEEE
Q 025363 175 KLIMENCYKALPAGGKLI 192 (254)
Q Consensus 175 ~~il~~~~~~L~pgG~l~ 192 (254)
..+++++...++|+..++
T Consensus 79 ~~vl~~l~~~l~~~~iv~ 96 (298)
T 2pv7_A 79 LETIERLKPYLTENMLLA 96 (298)
T ss_dssp HHHHHHHGGGCCTTSEEE
T ss_pred HHHHHHHHhhcCCCcEEE
Confidence 778888888888876443
No 484
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=35.42 E-value=47 Score=28.75 Aligned_cols=67 Identities=15% Similarity=0.133 Sum_probs=36.8
Q ss_pred CeEEEecCccc-HH--HHHHHHHcCCC---CeEEEeec-hHHHhhCCC---------CCCcEEEe-CCCCCCCCCccEEE
Q 025363 99 KRLVDVGGSAG-DC--LRMILQKHRFI---CEGINFDL-PEVVAEAPS---------IPGVTHIG-GDMFKSIPAADAIF 161 (254)
Q Consensus 99 ~~vlDvG~G~G-~~--~~~l~~~~~~~---~~~~~~D~-~~~~~~~~~---------~~~i~~~~-~d~~~~~p~~D~v~ 161 (254)
.+|.=||+|++ .. +..|++..+++ + ++.+|+ ++.++.... ....++.. .|..+.+.++|+|+
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~e-V~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRK-LKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEE-EEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCE-EEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 48999999997 22 22455542233 4 788898 544333211 12344443 34333355679988
Q ss_pred ecccc
Q 025363 162 MKWVL 166 (254)
Q Consensus 162 ~~~vl 166 (254)
+.--.
T Consensus 108 iaag~ 112 (472)
T 1u8x_X 108 AHIRV 112 (472)
T ss_dssp ECCCT
T ss_pred EcCCC
Confidence 75533
No 485
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=35.12 E-value=38 Score=29.07 Aligned_cols=100 Identities=12% Similarity=0.057 Sum_probs=54.5
Q ss_pred CCeEEEecCcccHH--HHHHHHHcCCCCeEEEeec-hHHHhhCCCC-------------------CCcEEEeCCCCCCCC
Q 025363 98 VKRLVDVGGSAGDC--LRMILQKHRFICEGINFDL-PEVVAEAPSI-------------------PGVTHIGGDMFKSIP 155 (254)
Q Consensus 98 ~~~vlDvG~G~G~~--~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-------------------~~i~~~~~d~~~~~p 155 (254)
-.+|.=||.|.=.+ +..|+++ +.+ ++++|. ++.++..+.. .+++|.. |..+...
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~--G~~-V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt-~~~~ai~ 96 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL--GHR-VVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAE-SAEEAVA 96 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCE-EEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECS-SHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCc-EEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEc-CHHHHHh
Confidence 35788887774332 3334444 446 999998 6666554331 2333311 1111122
Q ss_pred CccEEEeccc--c--ccCC-HHHHHHHHHHHHHhCCC--CCEEEEEccccCCC
Q 025363 156 AADAIFMKWV--L--TTWT-DDECKLIMENCYKALPA--GGKLIACEPVLPDD 201 (254)
Q Consensus 156 ~~D~v~~~~v--l--h~~~-~~~~~~il~~~~~~L~p--gG~l~i~d~~~~~~ 201 (254)
.+|++++.-- + +.-+ -.......+.+.+.|++ .|.++|.+.+.+..
T Consensus 97 ~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppG 149 (444)
T 3vtf_A 97 ATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPG 149 (444)
T ss_dssp TSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTT
T ss_pred cCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCc
Confidence 3477665321 1 1111 13456778888888886 46788888877644
No 486
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=34.95 E-value=26 Score=25.55 Aligned_cols=37 Identities=16% Similarity=-0.099 Sum_probs=25.5
Q ss_pred ecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCC
Q 025363 104 VGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIP 141 (254)
Q Consensus 104 vG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 141 (254)
+.||||.=..-.+.++|+++ +..+--+.....+++.+
T Consensus 67 liCGTGiG~siaANKv~GIR-AAl~~d~~sA~~ar~hN 103 (162)
T 2vvp_A 67 VLGGSGNGEQIAANKVPGAR-CALAWSVQTAALAREHN 103 (162)
T ss_dssp EEESSSHHHHHHHHTSTTCC-EEECCSHHHHHHHHHTT
T ss_pred EEeCCcHHHHHHHhcCCCeE-EEEeCCHHHHHHHHHhC
Confidence 45788887777899999999 76665455444554443
No 487
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=34.17 E-value=1.5e+02 Score=23.65 Aligned_cols=88 Identities=8% Similarity=0.041 Sum_probs=49.7
Q ss_pred CCCCCeEEEecCcc-c-HHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC------CCcEEEeCCCCCCCCCccEEEeccc
Q 025363 95 FKGVKRLVDVGGSA-G-DCLRMILQKHRFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPAADAIFMKWV 165 (254)
Q Consensus 95 ~~~~~~vlDvG~G~-G-~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~------~~i~~~~~d~~~~~p~~D~v~~~~v 165 (254)
...+++|-=||+|. | ..+..++ .+.+ ++++|. ++.++.+.+. .++++. .|.. ...++|+|+..-.
T Consensus 9 ~~~~~~V~vIG~G~MG~~iA~~la---aG~~-V~v~d~~~~~~~~~~~~l~~~~~~~i~~~-~~~~-~~~~aDlVieavp 82 (293)
T 1zej_A 9 HHHHMKVFVIGAGLMGRGIAIAIA---SKHE-VVLQDVSEKALEAAREQIPEELLSKIEFT-TTLE-KVKDCDIVMEAVF 82 (293)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHH---TTSE-EEEECSCHHHHHHHHHHSCGGGGGGEEEE-SSCT-TGGGCSEEEECCC
T ss_pred ccCCCeEEEEeeCHHHHHHHHHHH---cCCE-EEEEECCHHHHHHHHHHHHHHHhCCeEEe-CCHH-HHcCCCEEEEcCc
Confidence 34578999999985 3 3444444 3667 999998 7666654432 245543 3442 2444699887432
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCEEEE
Q 025363 166 LTTWTDDECKLIMENCYKALPAGGKLIA 193 (254)
Q Consensus 166 lh~~~~~~~~~il~~~~~~L~pgG~l~i 193 (254)
- +.+-...+++++... ||..+..
T Consensus 83 e---~~~vk~~l~~~l~~~--~~~Ilas 105 (293)
T 1zej_A 83 E---DLNTKVEVLREVERL--TNAPLCS 105 (293)
T ss_dssp S---CHHHHHHHHHHHHTT--CCSCEEE
T ss_pred C---CHHHHHHHHHHHhcC--CCCEEEE
Confidence 2 112234566776655 7765544
No 488
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=33.98 E-value=1.6e+02 Score=22.71 Aligned_cols=67 Identities=18% Similarity=0.126 Sum_probs=38.6
Q ss_pred CeEEEecCcccHHHHHHHHHc--CCCCeEEEeec-hHHHhh-CCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHHH
Q 025363 99 KRLVDVGGSAGDCLRMILQKH--RFICEGINFDL-PEVVAE-APSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDEC 174 (254)
Q Consensus 99 ~~vlDvG~G~G~~~~~l~~~~--~~~~~~~~~D~-~~~~~~-~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~ 174 (254)
++||=-|++ +....++++++ .+.+ +++.|+ ++..+. .++..++.++..|+. +.+++
T Consensus 3 K~vlVTGas-~GIG~aia~~la~~Ga~-V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~------------------~~~~v 62 (247)
T 3ged_A 3 RGVIVTGGG-HGIGKQICLDFLEAGDK-VCFIDIDEKRSADFAKERPNLFYFHGDVA------------------DPLTL 62 (247)
T ss_dssp CEEEEESTT-SHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHTTCTTEEEEECCTT------------------SHHHH
T ss_pred CEEEEecCC-CHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhcCCEEEEEecCC------------------CHHHH
Confidence 455555554 44444454443 2567 888888 544443 333356666666653 23566
Q ss_pred HHHHHHHHHhC
Q 025363 175 KLIMENCYKAL 185 (254)
Q Consensus 175 ~~il~~~~~~L 185 (254)
.++++++.+..
T Consensus 63 ~~~v~~~~~~~ 73 (247)
T 3ged_A 63 KKFVEYAMEKL 73 (247)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 77777777765
No 489
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=33.95 E-value=56 Score=25.98 Aligned_cols=88 Identities=13% Similarity=0.092 Sum_probs=48.9
Q ss_pred CCeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCC-----------C-----------------CCcEEE
Q 025363 98 VKRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPS-----------I-----------------PGVTHI 146 (254)
Q Consensus 98 ~~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~-----------~-----------------~~i~~~ 146 (254)
-.+|.=||+|. |. .+..++++ +.+ ++++|. ++.++.++. . .++.+.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~--G~~-V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 91 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT--GHT-VVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS 91 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCE-EEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCe-EEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe
Confidence 35788899875 22 34444443 457 999998 555443211 0 134432
Q ss_pred eCCCCCCCCCccEEEeccccccCCHHHHHHHHHHHHHhCCCCCEEE
Q 025363 147 GGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLI 192 (254)
Q Consensus 147 ~~d~~~~~p~~D~v~~~~vlh~~~~~~~~~il~~~~~~L~pgG~l~ 192 (254)
.|..+...++|+|+..-.- +.+....+++++.+.++|+..++
T Consensus 92 -~~~~~~~~~aD~Vi~avp~---~~~~~~~v~~~l~~~~~~~~iv~ 133 (302)
T 1f0y_A 92 -TDAASVVHSTDLVVEAIVE---NLKVKNELFKRLDKFAAEHTIFA 133 (302)
T ss_dssp -SCHHHHTTSCSEEEECCCS---CHHHHHHHHHHHTTTSCTTCEEE
T ss_pred -cCHHHhhcCCCEEEEcCcC---cHHHHHHHHHHHHhhCCCCeEEE
Confidence 2322124456998874321 11223577888888888877543
No 490
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=33.83 E-value=25 Score=28.87 Aligned_cols=66 Identities=11% Similarity=0.026 Sum_probs=42.9
Q ss_pred CeEEEecCcccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCC-CCcEEEeCCCCCC----CC--CccEEEecc
Q 025363 99 KRLVDVGGSAGDCLRMILQKHRFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS----IP--AADAIFMKW 164 (254)
Q Consensus 99 ~~vlDvG~G~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~-~~i~~~~~d~~~~----~p--~~D~v~~~~ 164 (254)
.+++|+=||.|.+...+.++.-+.+.+..+|. +...+..+.+ +...+..+|+.+- ++ ..|+++...
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecC
Confidence 47999999999999999988433342567787 5554443332 4455667777654 23 238888643
No 491
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=33.32 E-value=78 Score=26.09 Aligned_cols=98 Identities=9% Similarity=0.087 Sum_probs=51.7
Q ss_pred CCCeEEEec--CcccHHHHHHHHHcCCC------CeEEEeechHHHhhCC---------CCC-CcE-EEeCCCCCCCCCc
Q 025363 97 GVKRLVDVG--GSAGDCLRMILQKHRFI------CEGINFDLPEVVAEAP---------SIP-GVT-HIGGDMFKSIPAA 157 (254)
Q Consensus 97 ~~~~vlDvG--~G~G~~~~~l~~~~~~~------~~~~~~D~~~~~~~~~---------~~~-~i~-~~~~d~~~~~p~~ 157 (254)
...+|.=+| |+.|..+..++...+-. . ..++|+++..+.++ ..+ ... ....|..+.+.++
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~e-L~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~a 101 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVE-LRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGV 101 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEE-EEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTC
T ss_pred CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccE-EEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCC
Confidence 345888898 46787777766664321 4 78889854322111 011 112 2233322225566
Q ss_pred cEEEeccccccCCH-------HHHHHHHHHHH----HhCCCCCEEEEEc
Q 025363 158 DAIFMKWVLTTWTD-------DECKLIMENCY----KALPAGGKLIACE 195 (254)
Q Consensus 158 D~v~~~~vlh~~~~-------~~~~~il~~~~----~~L~pgG~l~i~d 195 (254)
|+|++....-.-+. ....++++.+. +.-+|+.++++..
T Consensus 102 dvVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs 150 (345)
T 4h7p_A 102 AIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG 150 (345)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred CEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence 99887654432221 12344555544 4446888877643
No 492
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=33.23 E-value=28 Score=24.97 Aligned_cols=37 Identities=11% Similarity=-0.114 Sum_probs=25.6
Q ss_pred ecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCC
Q 025363 104 VGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIP 141 (254)
Q Consensus 104 vG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 141 (254)
+.||||.=..-.+.++|+++ +..+--+.....+++.+
T Consensus 63 liCGTGiG~siaANKv~GIR-AAl~~d~~sA~~ar~hN 99 (149)
T 3he8_A 63 VICGTGLGISIAANKVPGIR-AAVCTNSYMARMSREHN 99 (149)
T ss_dssp EEESSSHHHHHHHHTSTTCC-EEECSSHHHHHHHHHTT
T ss_pred EEcCCcHHHHHHhhcCCCeE-EEEeCCHHHHHHHHHhC
Confidence 35788877777889999999 76665555555555443
No 493
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=33.18 E-value=1.2e+02 Score=24.32 Aligned_cols=88 Identities=13% Similarity=0.126 Sum_probs=49.6
Q ss_pred CCeEEEecCcc-cH-HHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEeccccccCCHHHH
Q 025363 98 VKRLVDVGGSA-GD-CLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDEC 174 (254)
Q Consensus 98 ~~~vlDvG~G~-G~-~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~ 174 (254)
..+|.=||+|. |. .+..+++. +.+ ++++|. ++..+...+. .+.+. .|..+...++|+|++.-. ++...
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~--G~~-V~~~dr~~~~~~~l~~~-g~~~~-~~~~e~~~~aDvVi~~vp----~~~~~ 101 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA--GYA-LQVWNRTPARAASLAAL-GATIH-EQARAAARDADIVVSMLE----NGAVV 101 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT--TCE-EEEECSCHHHHHHHHTT-TCEEE-SSHHHHHTTCSEEEECCS----SHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhC--CCe-EEEEcCCHHHHHHHHHC-CCEee-CCHHHHHhcCCEEEEECC----CHHHH
Confidence 46898898873 33 23333333 456 899998 6655554432 34332 122111334598886331 23455
Q ss_pred HHHHH--HHHHhCCCCCEEEEE
Q 025363 175 KLIME--NCYKALPAGGKLIAC 194 (254)
Q Consensus 175 ~~il~--~~~~~L~pgG~l~i~ 194 (254)
..++. .+...++||..++-.
T Consensus 102 ~~v~~~~~~~~~l~~~~~vi~~ 123 (320)
T 4dll_A 102 QDVLFAQGVAAAMKPGSLFLDM 123 (320)
T ss_dssp HHHHTTTCHHHHCCTTCEEEEC
T ss_pred HHHHcchhHHhhCCCCCEEEec
Confidence 66676 777888887665543
No 494
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=33.14 E-value=17 Score=30.27 Aligned_cols=94 Identities=13% Similarity=0.104 Sum_probs=47.6
Q ss_pred CCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCC-C-CCcEEEeCCCCC--C-CCCccEEEeccccccCC
Q 025363 98 VKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPS-I-PGVTHIGGDMFK--S-IPAADAIFMKWVLTTWT 170 (254)
Q Consensus 98 ~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~-~-~~i~~~~~d~~~--~-~p~~D~v~~~~vlh~~~ 170 (254)
+.+|+=+|+| .|..+...++.. +.+ ++++|. ++-.+.+.+ . ..+.....+..+ . +...|+++..-.....
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~-Ga~-V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~- 242 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM-GAQ-VTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGA- 242 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCE-EEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCE-EEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcc-
Confidence 4789999874 455555566555 447 999997 554433322 1 122211111100 0 1234988764322110
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 171 DDECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 171 ~~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
....-+.+...+.|||||.++..-
T Consensus 243 -~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 243 -KAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC
T ss_pred -ccchhHHHHHHHhhcCCCEEEEEe
Confidence 011113467778899999876543
No 495
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=33.00 E-value=30 Score=25.31 Aligned_cols=37 Identities=11% Similarity=-0.120 Sum_probs=25.5
Q ss_pred ecCcccHHHHHHHHHcCCCCeEEEeechHHHhhCCCCC
Q 025363 104 VGGSAGDCLRMILQKHRFICEGINFDLPEVVAEAPSIP 141 (254)
Q Consensus 104 vG~G~G~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 141 (254)
+.||||.=..-.+.++|+++ +..+--+.....+++.+
T Consensus 84 liCGTGiG~sIaANKv~GIR-AAlc~d~~sA~laR~hN 120 (166)
T 3s5p_A 84 LVCGTGIGISIAANKMKGIR-CALCSTEYDAEMARKHN 120 (166)
T ss_dssp EEESSSHHHHHHHHTSTTCC-EEECSSHHHHHHHHHTT
T ss_pred EEcCCcHHHHHHhhcCCCeE-EEEeCCHHHHHHHHHhC
Confidence 45788877777889999999 76665555555555443
No 496
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=32.94 E-value=1.1e+02 Score=23.58 Aligned_cols=63 Identities=14% Similarity=0.086 Sum_probs=37.0
Q ss_pred eEEEecCcccHHHHHHHHHcC----CCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC--C----CCccEEEeccc
Q 025363 100 RLVDVGGSAGDCLRMILQKHR----FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--I----PAADAIFMKWV 165 (254)
Q Consensus 100 ~vlDvG~G~G~~~~~l~~~~~----~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~--~----p~~D~v~~~~v 165 (254)
+||= =||+|..+..+++.+- +.+ +++++. +.-..... ..+++++.+|+.+. + .+.|+|+....
T Consensus 2 ~ilV-tGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 2 SIAV-TGATGQLGGLVIQHLLKKVPASQ-IIAIVRNVEKASTLA-DQGVEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CEEE-TTTTSHHHHHHHHHHTTTSCGGG-EEEEESCTTTTHHHH-HTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred eEEE-EcCCchHHHHHHHHHHHhCCCCe-EEEEEcCHHHHhHHh-hcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 3443 3568888888777653 456 888876 32111111 14688999999764 2 22387775433
No 497
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=32.83 E-value=1e+02 Score=26.29 Aligned_cols=96 Identities=13% Similarity=0.008 Sum_probs=52.9
Q ss_pred HHHHhhcCCCCCCCeEEEecCcc-cHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEec
Q 025363 86 TSVLEGYNGFKGVKRLVDVGGSA-GDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMK 163 (254)
Q Consensus 86 ~~i~~~~~~~~~~~~vlDvG~G~-G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~ 163 (254)
..+.+..+..-.+.+|+=+|+|. |......++.+ +.+ ++++|. |.....+.. ....+ .++.+-+..+|+|+..
T Consensus 208 ~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~-Ga~-Viv~D~dp~ra~~A~~-~G~~v--~~Leeal~~ADIVi~a 282 (435)
T 3gvp_A 208 DGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAM-GSI-VYVTEIDPICALQACM-DGFRL--VKLNEVIRQVDIVITC 282 (435)
T ss_dssp HHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-TCE-EEEECSCHHHHHHHHH-TTCEE--CCHHHHTTTCSEEEEC
T ss_pred HHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHC-CCE-EEEEeCChhhhHHHHH-cCCEe--ccHHHHHhcCCEEEEC
Confidence 34444432223578999998874 55555555555 567 999998 533222221 12222 2332225667998874
Q ss_pred cc-cccCCHHHHHHHHHHHHHhCCCCCEEEEE
Q 025363 164 WV-LTTWTDDECKLIMENCYKALPAGGKLIAC 194 (254)
Q Consensus 164 ~v-lh~~~~~~~~~il~~~~~~L~pgG~l~i~ 194 (254)
.. -|.++ ++..+.||||+.|+-+
T Consensus 283 tgt~~lI~--------~e~l~~MK~gailINv 306 (435)
T 3gvp_A 283 TGNKNVVT--------REHLDRMKNSCIVCNM 306 (435)
T ss_dssp SSCSCSBC--------HHHHHHSCTTEEEEEC
T ss_pred CCCcccCC--------HHHHHhcCCCcEEEEe
Confidence 22 22222 2556779999876654
No 498
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=32.70 E-value=1.5e+02 Score=24.02 Aligned_cols=95 Identities=11% Similarity=0.030 Sum_probs=47.1
Q ss_pred CCeEEEecCcccHHHHHHHHHcCCC-CeEEEeec-hHHHhh-C---CC-----CCCcEEE-eCCCCCCCCCccEEEeccc
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHRFI-CEGINFDL-PEVVAE-A---PS-----IPGVTHI-GGDMFKSIPAADAIFMKWV 165 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~~~-~~~~~~D~-~~~~~~-~---~~-----~~~i~~~-~~d~~~~~p~~D~v~~~~v 165 (254)
..+|.=||+|.=..+...+-...+. + ++.+|. ++.++. + .. ..+.++. ..|. +.+.++|+|++.--
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaag 84 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGD-VVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTAG 84 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEccC
Confidence 4578888886433332222222233 7 899997 433221 0 00 0133443 3454 44666799887543
Q ss_pred cccCCH-----------HHHHHHHHHHHHhCCCCCEEEEEc
Q 025363 166 LTTWTD-----------DECKLIMENCYKALPAGGKLIACE 195 (254)
Q Consensus 166 lh~~~~-----------~~~~~il~~~~~~L~pgG~l~i~d 195 (254)
.-.-+. .-...+.+.+.+. .|++++++..
T Consensus 85 ~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvt 124 (324)
T 3gvi_A 85 VPRKPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFVICIT 124 (324)
T ss_dssp CCCC-----CHHHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred cCCCCCCCHHHHHHhhHHHHHHHHHHHHHH-CCCeEEEecC
Confidence 211111 1123344444454 4899888854
No 499
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=32.67 E-value=2e+02 Score=23.41 Aligned_cols=61 Identities=11% Similarity=-0.011 Sum_probs=36.1
Q ss_pred CCeEEEecCcccHHHHHHHHHcC-CCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCC--C----CCccEEEec
Q 025363 98 VKRLVDVGGSAGDCLRMILQKHR-FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--I----PAADAIFMK 163 (254)
Q Consensus 98 ~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~--~----p~~D~v~~~ 163 (254)
.++|+=+||| ..+..+++... +.. +++.|. .+-++.+++ .+..+..|..+. + .+.|+|+..
T Consensus 16 ~mkilvlGaG--~vG~~~~~~L~~~~~-v~~~~~~~~~~~~~~~--~~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 16 HMKVLILGAG--NIGRAIAWDLKDEFD-VYIGDVNNENLEKVKE--FATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp CCEEEEECCS--HHHHHHHHHHTTTSE-EEEEESCHHHHHHHTT--TSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred ccEEEEECCC--HHHHHHHHHHhcCCC-eEEEEcCHHHHHHHhc--cCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 4689999984 44444443332 234 777787 666655543 456666777553 2 334888853
No 500
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=32.64 E-value=77 Score=27.61 Aligned_cols=83 Identities=16% Similarity=0.014 Sum_probs=45.0
Q ss_pred CCCeEEEecCc-ccHHHHHHHHHcCCCCeEEEeec-hHHHhhCCCCCCcEEEeCCCCCCCCCccEEEecc-ccccCCHHH
Q 025363 97 GVKRLVDVGGS-AGDCLRMILQKHRFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKW-VLTTWTDDE 173 (254)
Q Consensus 97 ~~~~vlDvG~G-~G~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~d~~~~~p~~D~v~~~~-vlh~~~~~~ 173 (254)
.+++|.=||.| .|......++.+ +.+ ++++|. +.-...+.. ..+.+ .++.+-+..+|+|++.- .-+.++
T Consensus 276 ~GktVgIIG~G~IG~~vA~~l~~~-G~~-V~v~d~~~~~~~~a~~-~G~~~--~~l~ell~~aDiVi~~~~t~~lI~--- 347 (494)
T 3d64_A 276 AGKIAVVAGYGDVGKGCAQSLRGL-GAT-VWVTEIDPICALQAAM-EGYRV--VTMEYAADKADIFVTATGNYHVIN--- 347 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-TCE-EEEECSCHHHHHHHHT-TTCEE--CCHHHHTTTCSEEEECSSSSCSBC---
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC-CCE-EEEEeCChHhHHHHHH-cCCEe--CCHHHHHhcCCEEEECCCcccccC---
Confidence 46788888765 344444444444 567 999998 443212111 12332 23222256679988753 222232
Q ss_pred HHHHHHHHHHhCCCCCEEE
Q 025363 174 CKLIMENCYKALPAGGKLI 192 (254)
Q Consensus 174 ~~~il~~~~~~L~pgG~l~ 192 (254)
++..+.||||..|+
T Consensus 348 -----~~~l~~MK~gAilI 361 (494)
T 3d64_A 348 -----HDHMKAMRHNAIVC 361 (494)
T ss_dssp -----HHHHHHCCTTEEEE
T ss_pred -----HHHHhhCCCCcEEE
Confidence 34556789987655
Done!