BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025364
(254 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa
Hydrolase In Complex With Quercetin
Length = 363
Score = 167 bits (423), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 139/235 (59%), Gaps = 10/235 (4%)
Query: 12 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP 71
FFR Y +G+ KP+VA+++G+T GGG G+S+ G FRVA K +FA PET IG P
Sbjct: 87 FFREEYXLNNAVGSCQKPYVALIHGITXGGGVGLSVHGQFRVATEKCLFAXPETAIGLFP 146
Query: 72 DAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDD 131
D G ++L L G LG FLALTG +L G ++ G+ATH+ SEKL +EE+L L +
Sbjct: 147 DVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAXLEEDLLALKSPS 206
Query: 132 PSVIEACLEKY--SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEASLINDPWC 188
I + LE Y + DK+ ++ D ++ CF +TVEEII++L+ + S +
Sbjct: 207 KENIASVLENYHTESKIDRDKSFILEEHXDKINSCFSANTVEEIIENLQQDGS----SFA 262
Query: 189 GSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 243
L+++ + SP SLK++LR + EG +T E L EYR+S Q R DF+E
Sbjct: 263 LEQLKVINKXSPTSLKITLRQLXEGSSKTLQEVLTXEYRLS-QACXR--GHDFHE 314
>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Thermoresistibile
Length = 353
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 129/246 (52%), Gaps = 16/246 (6%)
Query: 8 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI 67
E + F+ Y +G + KP+V+I++G+ MGGG GV G RV T A PE I
Sbjct: 86 EARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGI 145
Query: 68 GFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKL 127
GF PD G ++ LS PG LG ALTGA +GA+ + G A HY +K+ +E +
Sbjct: 146 GFIPDVGGTYLLSRAPGKLGLHAALTGAPFSGADAIVMGFADHYVPHDKI----DEFTRA 201
Query: 128 VTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPW 187
V D ++A L ++ P + + + +D+C+ DTV +II +L + + P
Sbjct: 202 VIADG--VDAALAAHAQ--EPPASPLAEQRSWIDECYTGDTVADIIAALRAH----DAPA 253
Query: 188 CGSTLRLLKEASPLSLKVSLRSIRE-GRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 246
G L+ SP++L V+L S+R + Q+ ++ L +EYR+S + L S D E
Sbjct: 254 AGEAADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYRVS---CASLKSHDLVEGIR 310
Query: 247 FQILNK 252
Q+++K
Sbjct: 311 AQLVDK 316
>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
pdb|4J2U|B Chain B, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
Length = 365
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 109/248 (43%), Gaps = 29/248 (11%)
Query: 10 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF 69
+DF+R Y + KP V++ G T GGG G+ R+ + + PE IG
Sbjct: 104 QDFWRVEYRXNDRIAAFPKPIVSLXQGFTXGGGVGLGCHARHRIVGETSQISXPECAIGL 163
Query: 70 HPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVT 129
PD G + L+ PG +G +L LTGA+ + + G A + V E
Sbjct: 164 VPDVGGTHLLARAPGRIGVWLGLTGARXGPGDAIFAGFADRF-VPE-------------A 209
Query: 130 DDPSVIEACLEKYSDLVYPDKNSVIHRI----DIVDKCFGLDTVEEIIDSLESEASLIND 185
D P +I A LE DL PD + R+ D +D+ F T+ EI LE+ +
Sbjct: 210 DWPDLI-AALEG-GDLALPDHAAPEGRLPVLQDEIDRLFA-GTLAEIPARLEA----TDT 262
Query: 186 PWCGSTLRLLKEASPLSLKVSLRSI-REGRFQTFDECLVREYRMSLQGVSRLISGDFYEV 244
P L+ L+ +SPL+L +L + R G E L EYR + + + DF E
Sbjct: 263 PLAAEALKALRRSSPLALAATLEILQRLGPSAGIREALDLEYRFTYRAQGQ---ADFLEG 319
Query: 245 SNFQILNK 252
I++K
Sbjct: 320 IRAAIIDK 327
>pdb|3JU1|A Chain A, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY
PROTEIN
pdb|3JU1|B Chain B, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY
PROTEIN
Length = 407
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 105/248 (42%), Gaps = 21/248 (8%)
Query: 7 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL 66
E K FF Y YLL T+ KP + +G+ GGG G+ + +V + A PE
Sbjct: 122 EVAKVFFEEEYRLDYLLHTYGKPVLVWGDGIVXGGGLGLXAGASHKVVTETSRIAXPEVT 181
Query: 67 IGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK 126
IG +PD G S++L+ PG G FL LT N A+ GLA HY + L +
Sbjct: 182 IGLYPDVGGSYFLNRXPGKXGLFLGLTAYHXNAADACYVGLADHYLNRDDKELXFDAXAT 241
Query: 127 L-VTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLES------- 178
L +D P++ L+ N + +++DI L +E ID L +
Sbjct: 242 LDWSDSPALNHQRLDTXI-------NELSNQVDIPKGDSVLAESQEXIDRLXAGSLTDIV 294
Query: 179 --EASLIND-PWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSR 235
++L D W SP+S ++ + G + +C E +S+ ++
Sbjct: 295 TRXSTLSTDEAWLSKACATXLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCAK 354
Query: 236 LISGDFYE 243
GDF E
Sbjct: 355 ---GDFCE 359
>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|B Chain B, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|C Chain C, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|D Chain D, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|E Chain E, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|F Chain F, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
Length = 254
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-HL 86
KP V +NGV G G +++ G R+A F T IG PD+G SF L L G
Sbjct: 92 KPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAK 151
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE--ELGKLVTDDPSVIEACLEK 141
+ L L +L+ E +A GL +EK L+EE L K + P+ A +K
Sbjct: 152 AQELLLLSPRLSAEEALALGLVHRVVPAEK--LMEEALSLAKELAQGPTRAYALTKK 206
>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) From Geobacillus Kaustophilus Hta426
pdb|2QQ3|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|G Chain G, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|H Chain H, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|I Chain I, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|J Chain J, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|K Chain K, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|L Chain L, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
Length = 258
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 29 PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL--PGHL 86
P +A +NG+ +GGG +++ VA F PE +G P AG + L+ L P
Sbjct: 97 PMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRA 156
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL---GKLVTDDP---SVIEACLE 140
E+L TGA+++ E G+ VS +L L+EE + G+L P +I+ ++
Sbjct: 157 LEWL-WTGARMSAKEAEQLGIVNRV-VSPEL-LMEETMRLAGRLAEQPPLALRLIKEAVQ 213
Query: 141 KYSDLVYP 148
K D YP
Sbjct: 214 KAVD--YP 219
>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|B Chain B, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|C Chain C, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
Length = 273
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 18/113 (15%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYL-SHLPGHL 86
KP +A +NG +GGG+ +++ +AC F PE G AG F + LP +
Sbjct: 108 KPTIAAVNGTALGGGSELALASDLVIACESASFGLPEVKRGLIAGAGGVFRIVEQLPRKV 167
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACL 139
L LTG + ++ + GL ++E +P D +V+EA L
Sbjct: 168 ALELVLTGEPMTASDALRWGL-----INEVVP------------DGTVVEAAL 203
>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|B Chain B, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|C Chain C, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|D Chain D, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|E Chain E, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|F Chain F, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
Length = 286
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 13 FRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI 67
F+ YS +L L KP +A +NG GGG +++ A K FA PE LI
Sbjct: 104 FQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILI 163
Query: 68 GFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 124
G P AG + L+ G L + LTG +++ + GL + E L+EE +
Sbjct: 164 GTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVE--TLVEEAI 219
>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|E Chain E, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|F Chain F, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis
Length = 265
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-HL 86
+P +A +NG+ +GGG +S+ FR+A ET + P AG + L L G
Sbjct: 103 QPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGR 162
Query: 87 GEFLALTGAKLNGAEMMACGLATH----YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ L TG +++ E GL + + EK I E K+ ++ P + E
Sbjct: 163 AKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAE---KIASNGPIAVRLAKEAI 219
Query: 143 SDLVYPD 149
S+ + D
Sbjct: 220 SNGIQVD 226
>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|B Chain B, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|C Chain C, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|D Chain D, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|E Chain E, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|F Chain F, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
Length = 258
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-L 86
KP +A +NG +GGG +++ A K F PE L+G P AG + L+ G L
Sbjct: 96 KPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSL 155
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLP---LIEEEL 124
+ LTG +++ + GL VS+ P L+EE +
Sbjct: 156 AMEMVLTGDRISAQDAKQAGL-----VSKIFPVETLVEEAI 191
>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|B Chain B, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|C Chain C, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|D Chain D, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|E Chain E, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|F Chain F, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
Length = 260
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-L 86
KP +A +NG +GGG +++ A K F PE L+G P AG + L+ G L
Sbjct: 98 KPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSL 157
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLP---LIEEEL 124
+ LTG +++ + GL VS+ P L+EE +
Sbjct: 158 AMEMVLTGDRISAQDAKQAGL-----VSKIFPVETLVEEAI 193
>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|B Chain B, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|C Chain C, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|D Chain D, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|E Chain E, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|F Chain F, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|2DUB|A Chain A, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|B Chain B, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|C Chain C, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|D Chain D, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|E Chain E, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|F Chain F, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
Length = 261
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-L 86
KP +A +NG +GGG +++ A K F PE L+G P AG + L+ G L
Sbjct: 99 KPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSL 158
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLP---LIEEEL 124
+ LTG +++ + GL VS+ P L+EE +
Sbjct: 159 AMEMVLTGDRISAQDAKQAGL-----VSKIFPVETLVEEAI 194
>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|B Chain B, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|C Chain C, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
Length = 267
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLS-HLPGHL 86
KP +A +NG +GGG +++ VA + F PE G AG F ++ LP +
Sbjct: 102 KPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKV 161
Query: 87 GEFLALTGAKLNGAEMMACGL 107
L LTG L+ A GL
Sbjct: 162 AMRLLLTGEPLSAAAARDWGL 182
>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|B Chain B, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|C Chain C, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
Length = 267
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLS-HLPGHL 86
KP +A +NG +GGG +++ VA + F PE G AG F ++ LP +
Sbjct: 102 KPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKV 161
Query: 87 GEFLALTGAKLNGAEMMACGL 107
L LTG L+ A GL
Sbjct: 162 AMRLLLTGEPLSAAAARDWGL 182
>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
Length = 715
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%)
Query: 29 PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE 88
P VA +NG+ +GGG + + FRV PE +G +P G + L L G
Sbjct: 105 PTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNA 164
Query: 89 FLALTGAKLNGAE 101
+ K N AE
Sbjct: 165 VEWIASGKENRAE 177
>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
Length = 263
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 25 THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 84
T K VA++NG GGG + + R+A + F +G PD GAS++L + G
Sbjct: 99 TSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIG 158
Query: 85 HLGEF-LALTGAKLNGAEMMACGL 107
+ L L G E + GL
Sbjct: 159 YEQTMNLLLEGKLFTSEEALRLGL 182
>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 14/141 (9%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-HL 86
KP + +NG + GG +++ +A FA +G P G S L G L
Sbjct: 92 KPVIGAINGAAVTGGLELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGL 151
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDL 145
++LTG L+ A+ + GL T ++L + + +V ++ + + A L Y
Sbjct: 152 ARRMSLTGDYLSAADALRAGLVTEVVPHDQLLGAAQAVAASIVGNNQNAVRALLASY--- 208
Query: 146 VYPDKNSVIHRIDIVDKCFGL 166
HRID GL
Sbjct: 209 ---------HRIDDAQTSAGL 220
>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
Length = 255
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 86
KP +A ++G +G G +++ VA + F T +G PD GAS L L G
Sbjct: 93 KPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRAR 152
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSV 134
+A+T K++ A G+ +H + +++ + ++ + V+ P++
Sbjct: 153 TSRMAMTAEKISAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTL 200
>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium
Avium
Length = 270
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 14/141 (9%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-HL 86
KP + +NG + GG +++ +A FA +G P G S L G L
Sbjct: 109 KPVIGAINGAAVTGGLELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGL 168
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDL 145
++LTG L+ A+ + GL T ++L + +V ++ + + A L Y
Sbjct: 169 ARRMSLTGDYLSAADALRAGLVTEVVPHDQLLGAARAVAASIVGNNQNAVRALLTSY--- 225
Query: 146 VYPDKNSVIHRIDIVDKCFGL 166
HRID GL
Sbjct: 226 ---------HRIDDAQTSAGL 237
>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 256
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 14/133 (10%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-HL 86
KP + +NG + GG +++ +A FA +G P G S L G L
Sbjct: 93 KPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGL 152
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDL 145
++LTG L+ + + GL T + L + +V ++ + A L+ Y
Sbjct: 153 ARRMSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVRALLDSY--- 209
Query: 146 VYPDKNSVIHRID 158
HRID
Sbjct: 210 ---------HRID 213
>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycob Smegmatis
Length = 263
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 14/165 (8%)
Query: 14 RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDA 73
R L S L KP VA + G +GGG +++ +A F PE +G P
Sbjct: 87 RNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGL 146
Query: 74 GASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATH-----------YSVSEKLPLIE 121
G + L+ G L LTG L E GL + +V++++ +
Sbjct: 147 GGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMS 206
Query: 122 EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 166
G+ V D ++ EA S + ++++ D D+ G+
Sbjct: 207 RPAGRAVKD--AINEAFERPLSAGMRYERDAFYAMFDTHDQTEGM 249
>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
pdb|1NZY|C Chain C, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 5/132 (3%)
Query: 10 KDFFRT----LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 65
+D FR + I+ + +P +A +NGV GGG G+S+ + F
Sbjct: 79 RDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWH 138
Query: 66 LIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 124
IG D S+ L+ + G L LT L E GL + ++ + ++
Sbjct: 139 TIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKV 198
Query: 125 GKLVTDDPSVIE 136
+ + P+ ++
Sbjct: 199 ARELAAAPTHLQ 210
>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
Length = 258
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
Query: 11 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH 70
DFF T L P +A + G +GGG +++ +A F PE +G
Sbjct: 83 DFFATWGK----LAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVL 138
Query: 71 PDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKL 117
P G S L+ G L LTG ++ AE GL + ++ L
Sbjct: 139 PGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDL 186
>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3Q0G|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
Length = 257
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
Query: 11 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH 70
DFF T L P +A + G +GGG +++ +A F PE +G
Sbjct: 82 DFFATWGK----LAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVL 137
Query: 71 PDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKL 117
P G S L+ G L LTG ++ AE GL + ++ L
Sbjct: 138 PGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDL 185
>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 10 KDFFRT----LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 65
+D FR + I+ + +P +A +NGV GGG G+S+ + F
Sbjct: 79 RDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWH 138
Query: 66 LIGFHPDAGASFYLSHLPG 84
IG D S+ L+ + G
Sbjct: 139 TIGIGNDTATSYSLARIVG 157
>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 278
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
Query: 11 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH 70
DFF T L P +A + G +GGG +++ +A F PE +G
Sbjct: 103 DFFATWGK----LAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVL 158
Query: 71 PDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKL 117
P G S L+ G L LTG ++ AE GL + ++ L
Sbjct: 159 PGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDL 206
>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 22 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH 81
LL + KP +A++NG GGG + + + F E G P S ++
Sbjct: 101 LLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMAD 160
Query: 82 LPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK-LVTDDPSVIEAC 138
GH + +TG G + GL +L + EL + L+ +P V+ A
Sbjct: 161 TVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAA 219
>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|B Chain B, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|C Chain C, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 265
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 15 TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAG 74
T+ + L T KP +A +NG +GGG + RV+ F PE G P AG
Sbjct: 90 TIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAG 149
Query: 75 ASFYLS-HLPGHLGEFLALTGAKLNGAEMMACGLATH 110
+ L +P + LTG L E GL H
Sbjct: 150 SMVRLKRQIPYTKAMEMILTGEPLTAFEAYHFGLVGH 186
>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 275
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 22 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH 81
LL + KP +A++NG GGG + + + F E G P S ++
Sbjct: 101 LLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMAD 160
Query: 82 LPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK-LVTDDPSVIEAC 138
GH + +TG G + GL +L + EL + L+ +P V+ A
Sbjct: 161 TVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAA 219
>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|B Chain B, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|D Chain D, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 22 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH 81
LL + KP +A++NG GGG + + + F E G P S ++
Sbjct: 101 LLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMAD 160
Query: 82 LPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK-LVTDDPSVIEAC 138
GH + +TG G + GL +L + EL + L+ +P V+ A
Sbjct: 161 TVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAA 219
>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 22 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH 81
LL + KP +A++NG GGG + + + F E G P S ++
Sbjct: 101 LLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGLSEINYGIPPGNLVSKAMAD 160
Query: 82 LPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK-LVTDDPSVIEAC 138
GH + +TG G + GL +L + EL + L+ +P V+ A
Sbjct: 161 TVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAA 219
>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 22 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH 81
LL + KP +A++NG GGG + + + F E G P S ++
Sbjct: 101 LLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMAD 160
Query: 82 LPGHLGEFL-ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK-LVTDDPSVIEAC 138
GH + +TG G + GL +L + EL + L+ +P V+ A
Sbjct: 161 TVGHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAA 219
>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 22 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH 81
LL + KP +A++NG GGG + + + F E G P S ++
Sbjct: 101 LLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMAD 160
Query: 82 LPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK-LVTDDPSVIEAC 138
GH + +TG G + GL +L + EL + L+ +P V+ A
Sbjct: 161 TVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAA 219
>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 22 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH 81
LL + KP +A++NG GGG + + + F E G P S ++
Sbjct: 101 LLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMAD 160
Query: 82 LPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK-LVTDDPSVIEAC 138
GH + +TG G + GL +L + EL + L+ +P V+ A
Sbjct: 161 TVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAA 219
>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|B Chain B, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|C Chain C, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
Length = 269
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 10 KDFFRT----LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 65
+D FR I+ + +P +A +NGV GGG G+S+ + F
Sbjct: 79 RDHFRIAALWWQQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWH 138
Query: 66 LIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 124
IG D S+ L+ + G L LT L E GL + ++ + ++
Sbjct: 139 TIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKV 198
Query: 125 GKLVTDDPS 133
+ + P+
Sbjct: 199 ARELAAAPT 207
>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|C Chain C, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|D Chain D, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|E Chain E, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|F Chain F, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|G Chain G, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|H Chain H, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|J Chain J, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|K Chain K, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|L Chain L, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2VSS|A Chain A, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|B Chain B, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|C Chain C, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|D Chain D, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 22 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH 81
LL + KP +A++NG GGG + + + F E G P S ++
Sbjct: 101 LLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMAD 160
Query: 82 LPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK-LVTDDPSVIEAC 138
GH + +TG G + GL +L + EL + L+ +P V+ A
Sbjct: 161 TVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAA 219
>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|B Chain B, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 258
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-L 86
KP +A +NG +G G +++ VA F PE +G P AG + L G L
Sbjct: 96 KPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSL 155
Query: 87 GEFLALTGAKLNGAEMMACGLAT 109
+ L+G + + GL +
Sbjct: 156 ASKMVLSGESITAQQAQQAGLVS 178
>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 22 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH 81
LL + KP +A++NG GGG + + + F E G P S ++
Sbjct: 101 LLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINYGIPPGNLVSKAMAD 160
Query: 82 LPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK-LVTDDPSVIEAC 138
GH + +TG G + GL +L + EL + L+ +P V+ A
Sbjct: 161 TVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAA 219
>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 29 PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-HLG 87
P +A +NG +G G +++ R+ + +A P+ G PDA A + L L G +
Sbjct: 100 PVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVA 159
Query: 88 EFLALTGAKLNGAEMMACGLATH 110
L LTGA + + GLA
Sbjct: 160 AELLLTGASFSAQRAVETGLANR 182
>pdb|3G5U|A Chain A, Structure Of P-Glycoprotein Reveals A Molecular Basis For
Poly-Specific Drug Binding
pdb|3G5U|B Chain B, Structure Of P-Glycoprotein Reveals A Molecular Basis For
Poly-Specific Drug Binding
Length = 1284
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 72 DAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDD 131
+A A ++ LP + GA+L+G + +A + K+ L++E L T+
Sbjct: 502 EANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTES 561
Query: 132 PSVIEACLEKYSD----LVYPDKNSVIHRIDIVDKCFGLDTVEE 171
+V++A L+K + +V + S + D++ G VE+
Sbjct: 562 EAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQ 605
>pdb|3G60|A Chain A, Structure Of P-Glycoprotein Reveals A Molecular Basis For
Poly-Specific Drug Binding
pdb|3G60|B Chain B, Structure Of P-Glycoprotein Reveals A Molecular Basis For
Poly-Specific Drug Binding
pdb|3G61|A Chain A, Structure Of P-Glycoprotein Reveals A Molecular Basis For
Poly-Specific Drug Binding
pdb|3G61|B Chain B, Structure Of P-Glycoprotein Reveals A Molecular Basis For
Poly-Specific Drug Binding
Length = 1284
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 72 DAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDD 131
+A A ++ LP + GA+L+G + +A + K+ L++E L T+
Sbjct: 502 EANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTES 561
Query: 132 PSVIEACLEKYSD----LVYPDKNSVIHRIDIVDKCFGLDTVEE 171
+V++A L+K + +V + S + D++ G VE+
Sbjct: 562 EAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQ 605
>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|B Chain B, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|C Chain C, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
Length = 296
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 8/88 (9%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG 87
KP +A ++G +GGG + R F E +G D G L LP +G
Sbjct: 135 KPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGT---LQRLPKVIG 191
Query: 88 EF-----LALTGAKLNGAEMMACGLATH 110
LA T K+ E + GL +
Sbjct: 192 NQSLVNELAFTARKMMADEALGSGLVSR 219
>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|B Chain B, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|C Chain C, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|D Chain D, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|E Chain E, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|F Chain F, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|G Chain G, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|H Chain H, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|I Chain I, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
Length = 287
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 7 EECKDF----FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 62
E+ +D+ F+T + + H P +A++NG+ G + VA K+ FAT
Sbjct: 102 EQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFAT 161
Query: 63 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGL 107
P +G +P + + TG ++ E + GL
Sbjct: 162 PGVNVGLFCSTPGVALARAVPRKVALEMLFTGEPISAQEALLHGL 206
>pdb|3M6M|A Chain A, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|B Chain B, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|C Chain C, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6N|A Chain A, Crystal Structure Of Rpff
pdb|3M6N|B Chain B, Crystal Structure Of Rpff
pdb|3M6N|C Chain C, Crystal Structure Of Rpff
Length = 305
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 6 LEECKDFFRTLYSFIYLLGTHLKPH-VAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 64
L+ + R +++F LG + H +A++ G +GGG ++ +A + PE
Sbjct: 120 LDYAQRCVRGVHAFHVGLGA--RAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPE 177
Query: 65 TLIGFHPDAGA-SFYLSHLPGHLGEFLALTGAKLNGAEMMACGL 107
L P GA SF + HL + + L G + +++ GL
Sbjct: 178 VLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGL 221
>pdb|3INV|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Nadph, Dump And C-448 Antifolate
pdb|3INV|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Nadph, Dump And C-448 Antifolate
pdb|3IRM|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Cycloguanil
pdb|3IRM|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Cycloguanil
pdb|3IRM|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Cycloguanil
pdb|3IRM|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Cycloguanil
pdb|3IRN|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Nadph And Cycloguanil
pdb|3IRN|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Nadph And Cycloguanil
pdb|3IRN|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Nadph And Cycloguanil
pdb|3IRN|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Nadph And Cycloguanil
pdb|3IRO|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Nadph And Q-8 Antifolate
pdb|3IRO|B Chain B, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Nadph And Q-8 Antifolate
pdb|3IRO|C Chain C, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Nadph And Q-8 Antifolate
pdb|3IRO|D Chain D, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate
Synthase Complexed With Nadph And Q-8 Antifolate
Length = 521
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 8 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI 67
E FFR L + L G ++KP A N V MG SIP FR G+ TL
Sbjct: 47 EDMKFFRDLTT--KLRGKNVKPSPAKRNAVVMGRKTWDSIPPKFRPLPGRLNVVLSSTLT 104
Query: 68 GFH 70
H
Sbjct: 105 TQH 107
>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From
Mycobacterium Marinum
Length = 278
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYL-SHLPGHL 86
KP +A + G + GG + RVA F E +P G++ L +P +
Sbjct: 116 KPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTV 175
Query: 87 GEFLALTGAKLNGAEMMACGLATH 110
L LTG + AE GL H
Sbjct: 176 ACDLLLTGRHITAAEAKEMGLVGH 199
>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
Length = 261
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 16/122 (13%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG 87
KP +A ++G +GGG + R A PE +G P + LP ++G
Sbjct: 99 KPVIAAIHGAALGGGLEFAXSCHXRFATESAKLGLPELTLGLIPGFAGT---QRLPRYVG 155
Query: 88 EFLA----LTGAKLNGAEMMACGL-----ATHYSVSEKLPLIEEELGKLVTDDPSVIEAC 138
+ A LT + GAE + GL A + + L + ++ GK P+ A
Sbjct: 156 KAKACEXXLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGK----SPATARAV 211
Query: 139 LE 140
LE
Sbjct: 212 LE 213
>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
pdb|3HIN|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
Length = 275
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 29 PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG--HL 86
P +A L G +GGG ++ RVA +A PE G G S L L G +
Sbjct: 108 PVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARM 167
Query: 87 GEFLALTGAKLNGAEMMACGLATH 110
+ + LTG + AE + G + +
Sbjct: 168 ADMM-LTGRVYSAAEGVVHGFSQY 190
>pdb|3PF8|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
pdb|3PF8|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
Length = 270
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 29 PHVA--ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 86
PHV L G + GG + G + K V P + G + +++ P H+
Sbjct: 116 PHVRNIYLVGHSQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHI 175
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE--EELGKLV-----TDDPSVIEACL 139
+ L L G + ++++LP+ E + K V TDD V
Sbjct: 176 PDRLPFKDLTLGGF---------YLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNAS 226
Query: 140 EKYSDLVYPDKNSVIHRIDIVDKCF 164
+KY D +Y +NS +H I+ D CF
Sbjct: 227 KKY-DQIY--QNSTLHLIEGADHCF 248
>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus
Thermophilus Hb8
Length = 253
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 41/98 (41%)
Query: 15 TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAG 74
+L + + T+ KP VA +NG + GGAG+++ V + E IGF
Sbjct: 82 SLXRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVXDEEARLGYTEVKIGFVAALV 141
Query: 75 ASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYS 112
+ + + + L LTG + E A GL +
Sbjct: 142 SVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRIA 179
>pdb|2H2Q|A Chain A, Crystal Structure Of Trypanosoma Cruzi Dihydrofolate
Reductase- Thymidylate Synthase
pdb|2H2Q|B Chain B, Crystal Structure Of Trypanosoma Cruzi Dihydrofolate
Reductase- Thymidylate Synthase
pdb|3CL9|A Chain A, Structure Of Bifunctional Tcdhfr-Ts In Complex With Mtx
pdb|3CLB|A Chain A, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq
pdb|3CLB|B Chain B, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq
pdb|3CLB|C Chain C, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq
pdb|3CLB|D Chain D, Structure Of Bifunctional Tcdhfr-Ts In Complex With Tmq
pdb|3HBB|A Chain A, Structures Of Dihydrofolate Reductase-Thymidylate Synthase
Of Trypanosoma Cruzi In The Folate-Free State And In
Complex With Two Antifolate Drugs, Trimetrexate And
Methotrexate
pdb|3HBB|B Chain B, Structures Of Dihydrofolate Reductase-Thymidylate Synthase
Of Trypanosoma Cruzi In The Folate-Free State And In
Complex With Two Antifolate Drugs, Trimetrexate And
Methotrexate
pdb|3HBB|C Chain C, Structures Of Dihydrofolate Reductase-Thymidylate Synthase
Of Trypanosoma Cruzi In The Folate-Free State And In
Complex With Two Antifolate Drugs, Trimetrexate And
Methotrexate
pdb|3HBB|D Chain D, Structures Of Dihydrofolate Reductase-Thymidylate Synthase
Of Trypanosoma Cruzi In The Folate-Free State And In
Complex With Two Antifolate Drugs, Trimetrexate And
Methotrexate
pdb|3KJS|A Chain A, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity
D Inhibitors: Dq1 Inhibitor Complex
pdb|3KJS|B Chain B, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity
D Inhibitors: Dq1 Inhibitor Complex
pdb|3KJS|C Chain C, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity
D Inhibitors: Dq1 Inhibitor Complex
pdb|3KJS|D Chain D, Crystal Structure Of T. Cruzi Dhfr-Ts With 3 High Affinity
D Inhibitors: Dq1 Inhibitor Complex
Length = 521
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 5 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 64
+ E FFR + + L G ++KP A N V MG SIP FR G+
Sbjct: 44 NVPEDMKFFRDVTT--KLRGKNVKPSPAKRNAVVMGRKTWDSIPPKFRPLPGRLNVVLSS 101
Query: 65 TLIGFH 70
TL H
Sbjct: 102 TLTTQH 107
>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase
pdb|1DCI|B Chain B, Dienoyl-Coa Isomerase
pdb|1DCI|C Chain C, Dienoyl-Coa Isomerase
Length = 275
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 8/88 (9%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG 87
KP +A ++G +GGG + R F E +G D G L LP +G
Sbjct: 108 KPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGT---LQRLPKVIG 164
Query: 88 EF-----LALTGAKLNGAEMMACGLATH 110
L T K+ E + GL +
Sbjct: 165 NRSLVNELTFTARKMMADEALDSGLVSR 192
>pdb|4F4C|A Chain A, The Crystal Structure Of The Multi-Drug Transporter
Length = 1321
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 62 TPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE 121
T E ++ A A ++ LP + G +L+G + +A + K+ L++
Sbjct: 520 TREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLD 579
Query: 122 EELGKLVTDDPSVIEACLEKYSD----LVYPDKNSVIHRIDIVDKCFGLDTVE 170
E L + +++ L+K + ++ + S I D++ C VE
Sbjct: 580 EATSALDAESEGIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVE 632
>pdb|3QM1|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate, Form Ii
Length = 265
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 21/145 (14%)
Query: 29 PHVA--ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 86
PHV L G GG + G + K V P + G + +++ P H+
Sbjct: 116 PHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHI 175
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE--EELGKLV-----TDDPSVIEACL 139
+ L L G + ++++LP+ E + K V TDD V
Sbjct: 176 PDRLPFKDLTLGGF---------YLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNAS 226
Query: 140 EKYSDLVYPDKNSVIHRIDIVDKCF 164
+KY D +Y +NS +H I+ D CF
Sbjct: 227 KKY-DQIY--QNSTLHLIEGADHCF 248
>pdb|3PF9|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant
pdb|3PFB|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFB|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFC|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Ferulic
Acid
pdb|3S2Z|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
pdb|3S2Z|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
Length = 270
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 21/145 (14%)
Query: 29 PHVA--ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 86
PHV L G GG + G + K V P + G + +++ P H+
Sbjct: 116 PHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHI 175
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE--EELGKLV-----TDDPSVIEACL 139
+ L L G + ++++LP+ E + K V TDD V
Sbjct: 176 PDRLPFKDLTLGGF---------YLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNAS 226
Query: 140 EKYSDLVYPDKNSVIHRIDIVDKCF 164
+KY D +Y +NS +H I+ D CF
Sbjct: 227 KKY-DQIY--QNSTLHLIEGADHCF 248
>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 264
Score = 30.8 bits (68), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 6/151 (3%)
Query: 29 PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-LG 87
P V +NG +G G +++ RV F P + G D + LS L GH
Sbjct: 109 PVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRA 168
Query: 88 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY 147
+ L+ KL + G+A E+ +L P I+ +D
Sbjct: 169 RAMLLSAEKLTAEIALHTGMANRIGTLADAQAWAAEIARLA---PLAIQHAKRVLNDDGA 225
Query: 148 PDKNSVIHRIDIVDKCFG-LDTVEEIIDSLE 177
++ H+ ++ DK +G D +E + +E
Sbjct: 226 IEEAWPAHK-ELFDKAWGSQDVIEAQVARME 255
>pdb|4EQX|A Chain A, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQX|B Chain B, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 19/101 (18%)
Query: 152 SVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIR 211
++IHR D ++K D + I+D L+ K P L + +I
Sbjct: 174 TLIHRSDKINKLMDADMNQPILDELD------------------KREIPYRLNEEINAIN 215
Query: 212 EGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 252
G TF V Y M ++GV + F E SN ++ K
Sbjct: 216 -GNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRK 255
>pdb|4EMW|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
pdb|4EMW|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
Length = 436
Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 19/101 (18%)
Query: 152 SVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIR 211
++IHR D ++K D + I+D L+ K P L + +I
Sbjct: 174 TLIHRSDKINKLMDADMNQPILDELD------------------KREIPYRLNEEINAIN 215
Query: 212 EGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 252
G TF V Y M ++GV + F E SN ++ K
Sbjct: 216 -GNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRK 255
>pdb|4EM3|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM3|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM4|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
pdb|4EM4|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
Length = 437
Score = 30.4 bits (67), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 19/101 (18%)
Query: 152 SVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIR 211
++IHR D ++K D + I+D L+ K P L + +I
Sbjct: 174 TLIHRSDKINKLMDADMNQPILDELD------------------KREIPYRLNEEINAIN 215
Query: 212 EGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 252
G TF V Y M ++GV + F E SN ++ K
Sbjct: 216 -GNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRK 255
>pdb|1YQZ|A Chain A, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
pdb|1YQZ|B Chain B, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
Length = 438
Score = 30.4 bits (67), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 19/101 (18%)
Query: 152 SVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIR 211
++IHR D ++K D + I+D L+ K P L + +I
Sbjct: 175 TLIHRSDKINKLMDADMNQPILDELD------------------KREIPYRLNEEINAIN 216
Query: 212 EGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 252
G TF V Y M ++GV + F E SN ++ K
Sbjct: 217 -GNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRK 256
>pdb|4EQS|A Chain A, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQS|B Chain B, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 19/101 (18%)
Query: 152 SVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIR 211
++IHR D ++K D + I+D L+ K P L + +I
Sbjct: 174 TLIHRSDKINKLMDADMNQPILDELD------------------KREIPYRLNEEINAIN 215
Query: 212 EGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 252
G TF V Y M ++GV + F E SN ++ K
Sbjct: 216 -GNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRK 255
>pdb|4EQR|A Chain A, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQR|B Chain B, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 19/101 (18%)
Query: 152 SVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIR 211
++IHR D ++K D + I+D L+ K P L + +I
Sbjct: 174 TLIHRSDKINKLMDADMNQPILDELD------------------KREIPYRLNEEINAIN 215
Query: 212 EGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 252
G TF V Y M ++GV + F E SN ++ K
Sbjct: 216 -GNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRK 255
>pdb|4EQW|A Chain A, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
pdb|4EQW|B Chain B, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
Length = 437
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 19/101 (18%)
Query: 152 SVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIR 211
++IHR D ++K D + I+D L+ K P L + +I
Sbjct: 174 TLIHRSDKINKLMDADMNQPILDELD------------------KREIPYRLNEEINAIN 215
Query: 212 EGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 252
G TF V Y M ++GV + F E SN ++ K
Sbjct: 216 -GNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRK 255
>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
pdb|2EJ5|B Chain B, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
Length = 257
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 11 DFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF 69
D R+ Y+ + HL KP VA +NG G G +++ FR+ K FA +G
Sbjct: 77 DVLRSRYAPMMKALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGL 136
Query: 70 HPDAGASFYLSHLPGHLGEF-LALTGAKLN 98
PDAG +YL L G LA+ G K+
Sbjct: 137 VPDAGHLYYLPRLVGRAKALELAVLGEKVT 166
>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
pdb|2UZF|B Chain B, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
Length = 273
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 85
KP +A++ G +GGG +++ +A +F +G S YL+ + GH
Sbjct: 108 KPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGH 165
>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 276
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Query: 29 PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF-HPDAGASFYLSHLPGHLG 87
P VA +NG +G G + A P +G D G + H+ L
Sbjct: 124 PVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLA 183
Query: 88 EFLALTGAKLNGAEMMACGLATHYS 112
+ ALTG +++ + GLA H +
Sbjct: 184 KEYALTGTRISAQRAVELGLANHVA 208
>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 290
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG 87
+P +A +NG +GGG +++ RVA F G YL LP +G
Sbjct: 124 QPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYL--LPRAIG 181
Query: 88 EFLA----LTGAKLNGAEMMACGLATHYSVSEKL 117
A LTG ++ E GL + SE L
Sbjct: 182 TSRASDIMLTGRDVDADEAERIGLVSRKVASESL 215
>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|B Chain B, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|C Chain C, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|D Chain D, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|E Chain E, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|F Chain F, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 282
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 9/109 (8%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL----P 83
KP +A + G + GG + P +A +F+ P L+G G Y H P
Sbjct: 121 KPSIAAVQGRCISGGLLLCWPCDLILASDDALFSDPVALMGI----GGVEYHGHTWELGP 176
Query: 84 GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDP 132
E L TG L E G+ ++L EL + + P
Sbjct: 177 RKAKEIL-FTGRALTAEEAERTGMVNRVVARDELDAQTRELAEQIATMP 224
>pdb|1FXD|A Chain A, Refined Crystal Structure Of Ferredoxin Ii From
Desulfovibrio Gigas At 1.7 Angstroms
Length = 58
Score = 28.1 bits (61), Expect = 4.9, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 128 VTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 180
V DD EAC+E D+ + N + +++ LD VEE IDS +EA
Sbjct: 4 VNDDCMAXEACVEICPDVF--EMNEEGDKAVVINPDSDLDCVEEAIDSCPAEA 54
>pdb|1F2G|A Chain A, The Nmr Solution Structure Of The 3fe Ferredoxin Ii From
Desulfovibrio Gigas, 15 Structures
Length = 58
Score = 28.1 bits (61), Expect = 5.1, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 128 VTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 180
V DD EAC+E D+ + N + +++ LD VEE IDS +EA
Sbjct: 4 VNDDCMACEACVEICPDVF--EMNEEGDKAVVINPDSDLDCVEEAIDSCPAEA 54
>pdb|2Q35|A Chain A, Crystal Structure Of The Y82f Variant Of Ech2
Decarboxylase Domain Of Curf From Lyngbya Majuscula
Length = 243
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Query: 29 PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHLG 87
P +A + G + GGG + + F V ++V+AT GF P S L L L
Sbjct: 92 PIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELA 151
Query: 88 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ + TG G E+ G+ + + ++LG+ + P + L+++
Sbjct: 152 QEMIYTGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSLVALKQH 206
>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 256
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYL-SHLPGHL 86
KP +A + G + GG + + VA F PE G AG L + +P +
Sbjct: 94 KPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQV 153
Query: 87 GEFLALTG 94
LALTG
Sbjct: 154 AMELALTG 161
>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
Length = 261
Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG 87
KP +A ++G + GG +++ RVA VF G G + L L GH
Sbjct: 99 KPVIAAVSGYAVAGGLELALWCDLRVAEQDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSR 158
Query: 88 EF-LALTGAKLNGAEMMACGLATH 110
+ LTG + E +A GLA
Sbjct: 159 AMDMILTGRAVQADEALAIGLANR 182
>pdb|4ACR|A Chain A, Crystal Structure Of N-Glycosylated, C-Terminally
Truncated Human Glypican-1
pdb|4ACR|B Chain B, Crystal Structure Of N-Glycosylated, C-Terminally
Truncated Human Glypican-1
pdb|4ACR|C Chain C, Crystal Structure Of N-Glycosylated, C-Terminally
Truncated Human Glypican-1
pdb|4ACR|D Chain D, Crystal Structure Of N-Glycosylated, C-Terminally
Truncated Human Glypican-1
Length = 478
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 133 SVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLES 178
+V++ CL +DL +N + + I DK +G VE +I S+ +
Sbjct: 273 NVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSGVESVIGSVHT 318
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,742,472
Number of Sequences: 62578
Number of extensions: 326911
Number of successful extensions: 965
Number of sequences better than 100.0: 93
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 897
Number of HSP's gapped (non-prelim): 95
length of query: 254
length of database: 14,973,337
effective HSP length: 97
effective length of query: 157
effective length of database: 8,903,271
effective search space: 1397813547
effective search space used: 1397813547
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)