BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025364
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RXN4|HIBC5_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial
OS=Arabidopsis thaliana GN=At4g31810 PE=2 SV=1
Length = 409
Score = 344 bits (882), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 159/252 (63%), Positives = 207/252 (82%)
Query: 1 MNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 60
+N+G EE K FF LY F+YL GT+LKP++AI++GVTMG G G+S+PG FRVA KTV
Sbjct: 111 INEGNTEESKLFFENLYKFVYLQGTYLKPNIAIMDGVTMGCGGGISLPGMFRVATDKTVL 170
Query: 61 ATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI 120
A PE IGFHPDAGAS+YLS LPG+LGE+LALTG KLNG EM+ACGLATHY ++ +LPLI
Sbjct: 171 AHPEVQIGFHPDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLATHYCLNARLPLI 230
Query: 121 EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 180
EE +GKL+TDDP+VIE L +Y DLVYPD +SV+H+I+++DK FGLDTVEEII+++E+EA
Sbjct: 231 EERIGKLLTDDPAVIEDSLAQYGDLVYPDSSSVLHKIELIDKYFGLDTVEEIIEAMENEA 290
Query: 181 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 240
+ + WC TL+ +KEASPLSLK++L+SIREGRFQT D+CL EYR+S+ GVS+++SGD
Sbjct: 291 ANSCNEWCKKTLKQIKEASPLSLKITLQSIREGRFQTLDQCLTHEYRISICGVSKVVSGD 350
Query: 241 FYEVSNFQILNK 252
F E ++++K
Sbjct: 351 FCEGIRARLVDK 362
>sp|Q5XF59|HIBC4_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial
OS=Arabidopsis thaliana GN=At3g60510 PE=2 SV=1
Length = 401
Score = 335 bits (860), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 171/251 (68%), Positives = 211/251 (84%)
Query: 2 NQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 61
+G + ++FF +LYSFIYLLGT+LKPHVAILNGVTMGGG GVSIPGTFRVA +T+FA
Sbjct: 108 TRGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFA 167
Query: 62 TPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE 121
TPET+IGFHPDAGASF LSHLPG LGE+L LTG KL+GAEM+ACGLATHY SE++P++E
Sbjct: 168 TPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEMLACGLATHYIRSEEVPVME 227
Query: 122 EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 181
E+L KL+TDDPSV+E+CLEK +++ +P+K VI RID+++KCF DTVEEIIDSLE EAS
Sbjct: 228 EQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTVEEIIDSLEIEAS 287
Query: 182 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDF 241
D WC +TLR LKE+SPLSLKV+LRSIREGR QT D+CL+REYRMSLQG+ +SG+F
Sbjct: 288 RRKDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNF 347
Query: 242 YEVSNFQILNK 252
E ++++K
Sbjct: 348 CEGVRARLIDK 358
>sp|Q6NMB0|HIBC3_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis
thaliana GN=At2g30660 PE=2 SV=1
Length = 378
Score = 248 bits (633), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 162/243 (66%)
Query: 1 MNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 60
M QGK DFFR Y+ Y++ T+ KP V+ILNG+ MG GAGVSI G FR+A TVF
Sbjct: 75 MVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHGRFRIATENTVF 134
Query: 61 ATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI 120
A PET +G PD GAS++LS LPG GE++ LTGA+L+GAE++ACGLATH+ S +L +
Sbjct: 135 AMPETSLGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAELLACGLATHFVPSTRLTAL 194
Query: 121 EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 180
E +L K+ + DPS + L+ Y+ + + S HR+D++D+CF T+EEII +LE E
Sbjct: 195 ETDLCKVGSSDPSFVSTILDAYTQHPHLKQKSAYHRLDVIDRCFSKRTMEEIISALERET 254
Query: 181 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 240
+ D W +T+R LK++SP SLK+SLRSIREGR Q CL REYRM + +S D
Sbjct: 255 TQELDDWSLTTIRALKKSSPSSLKISLRSIREGRLQGVGHCLTREYRMVCHVMKGDLSKD 314
Query: 241 FYE 243
E
Sbjct: 315 LVE 317
>sp|Q9LKJ1|HIBC1_ARATH 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1
PE=1 SV=1
Length = 378
Score = 246 bits (627), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 162/243 (66%)
Query: 1 MNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 60
+NQG ++F + Y Y++ T+ K V+ILNG+ MGGGAGVS+ G FR+A TVF
Sbjct: 79 INQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVF 138
Query: 61 ATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI 120
A PET +G PD GAS++LS LPG GE++ LTGA+L+GAEM+ACGLATH+ S +L +
Sbjct: 139 AMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSTRLTAL 198
Query: 121 EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 180
E +L ++ ++DP+ L+ Y+ + S R+D++D+CF TVEEII +LE EA
Sbjct: 199 EADLCRINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDRCFSRRTVEEIISALEREA 258
Query: 181 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 240
+ D W +T++ LK+ SP SLK+SLRSIREGR Q +CL+REYRM + IS D
Sbjct: 259 TQEADGWISATIQALKKGSPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKD 318
Query: 241 FYE 243
F E
Sbjct: 319 FVE 321
>sp|Q1PEY5|HIBC2_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 2 OS=Arabidopsis
thaliana GN=At2g30650 PE=2 SV=1
Length = 378
Score = 239 bits (610), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/250 (47%), Positives = 167/250 (66%)
Query: 3 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 62
QGKL +F+ Y+ Y+L T+ KP V+ILNG+ MGGGAG+S G FR+A TVFA
Sbjct: 77 QGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAM 136
Query: 63 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 122
PET +G PD GAS++LS LPG GE++ LTGA+L+GAEM+ACGLATH+ S L +E
Sbjct: 137 PETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEA 196
Query: 123 ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 182
EL K+ + + + I L+ Y++ + +++S HR+D++D+CF TVEEI +LE E +
Sbjct: 197 ELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQ 256
Query: 183 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFY 242
+ W +T++ L++ASP LK+SLRSIREGR Q +CL+REYRM + IS DF
Sbjct: 257 KPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFV 316
Query: 243 EVSNFQILNK 252
E +++K
Sbjct: 317 EGCRAVLIDK 326
>sp|Q9SHJ8|HIBC8_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 OS=Arabidopsis
thaliana GN=At1g06550 PE=2 SV=2
Length = 387
Score = 215 bits (547), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/241 (43%), Positives = 159/241 (65%)
Query: 3 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 62
Q + C + +Y Y + T+ K V+++NG++MGGGA + +P F V KTVFAT
Sbjct: 81 QESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKFSVVTEKTVFAT 140
Query: 63 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 122
PE GFH D G S+ S LPGHLGEFLALTGA+LNG E++A G+ATH+ S KL +E
Sbjct: 141 PEASFGFHTDCGFSYIHSRLPGHLGEFLALTGARLNGKELVAIGMATHFVPSGKLMDLEA 200
Query: 123 ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 182
L L + D V+++ +E++S+ V DK+S++++ ++++CF ++V++II + E+EAS
Sbjct: 201 RLVSLDSGDADVVQSTIEEFSEKVNLDKDSILNKQSVINECFSKESVKQIIQAFEAEASK 260
Query: 183 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFY 242
+ W ++ LK +SP LK+ L+SIREGR QT +CL +E+R++L + + IS D Y
Sbjct: 261 DGNEWITPVIKGLKRSSPTGLKIVLQSIREGRKQTLSDCLKKEFRLTLNILRKTISPDMY 320
Query: 243 E 243
E
Sbjct: 321 E 321
>sp|Q6NVY1|HIBCH_HUMAN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens
GN=HIBCH PE=1 SV=2
Length = 386
Score = 171 bits (433), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 142/235 (60%), Gaps = 10/235 (4%)
Query: 12 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP 71
FFR Y +G+ KP+VA+++G+TMGGG G+S+ G FRVA K +FA PET IG P
Sbjct: 117 FFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFP 176
Query: 72 DAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDD 131
D G ++L L G LG FLALTG +L G ++ G+ATH+ SEKL ++EE+L L +
Sbjct: 177 DVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPS 236
Query: 132 PSVIEACLEKY--SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEASLINDPWC 188
I + LE Y + DK+ ++ +D ++ CF +TVEEII++L+ + S +
Sbjct: 237 KENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGS----SFA 292
Query: 189 GSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 243
L+++ + SP SLK++LR + EG +T E L EYR+S Q R DF+E
Sbjct: 293 LEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLS-QACMR--GHDFHE 344
>sp|Q8QZS1|HIBCH_MOUSE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus
GN=Hibch PE=1 SV=1
Length = 385
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 135/224 (60%), Gaps = 7/224 (3%)
Query: 9 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIG 68
+D FR Y + + KP+VA+++G+TMGGG G+S+ G FRVA +++FA PET IG
Sbjct: 113 TQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIG 172
Query: 69 FHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLV 128
PD G ++L L G LG FLALTG +L G ++ G+ATH+ SEKL ++EEEL L
Sbjct: 173 LFPDVGGGYFLPRLQGKLGYFLALTGYRLKGRDVHRAGIATHFVDSEKLRVLEEELLALK 232
Query: 129 TDDPSVIEACLEKYSDLVYPDKNSVI---HRIDIVDKCFGLDTVEEIIDSLESEASLIND 185
+ + LE Y D++ I +D ++ CF +TVE+II++L + S
Sbjct: 233 SPSAEDVAGVLESYHAKSKMDQDKSIIFEEHMDKINSCFSANTVEQIIENLRQDGS---- 288
Query: 186 PWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS 229
P+ ++++ + SP SLK++LR + EG +T E L+ EYR++
Sbjct: 289 PFAIEQMKVINKMSPTSLKITLRQLMEGSSKTLQEVLIMEYRIT 332
>sp|Q28FR6|HIBCH_XENTR 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus
tropicalis GN=hibch PE=2 SV=1
Length = 385
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 144/251 (57%), Gaps = 16/251 (6%)
Query: 9 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIG 68
+DFFR Y +GT+ KP+VA+++G+TMGGG G+S+ G FRVA T+FA PET IG
Sbjct: 113 AQDFFREEYILNNAIGTYKKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIG 172
Query: 69 FHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLV 128
PD G ++L LPG LG +LALTG +L G+++ G+ATH+ SEK+P +E++L +
Sbjct: 173 LFPDVGGGYFLPRLPGKLGLYLALTGFRLKGSDVQKAGIATHFVESEKIPSLEQDLVAMK 232
Query: 129 TDDPSVIEACLEKYSDLVYP--DKNSVI-HRIDIVDKCFGLDTVEEIIDSLESEASLIND 185
+ L+ Y + Y DK V+ +D ++ F +VE II++L + S
Sbjct: 233 CPSKENVADVLDSYHNKSYAAQDKPFVLAEHLDKINSLFSASSVEAIIENLRCDGS---- 288
Query: 186 PWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS---LQGVSRLISGDFY 242
+ L+ L SP SLK++ R ++EG + E L EYR+S ++G DFY
Sbjct: 289 SFALKQLQTLSTMSPTSLKITFRQLKEGSSMSLQEVLTMEYRLSQACMKGY------DFY 342
Query: 243 EVSNFQILNKH 253
E +++K+
Sbjct: 343 EGVRAVLIDKN 353
>sp|Q5XIE6|HIBCH_RAT 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus
norvegicus GN=Hibch PE=1 SV=2
Length = 385
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 135/223 (60%), Gaps = 7/223 (3%)
Query: 10 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF 69
+D FR Y + + KP+VA+++G+TMGGG G+S+ G FRVA +++FA PET IG
Sbjct: 114 QDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGL 173
Query: 70 HPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVT 129
PD G ++L L G LG FLALTG +L G ++ G+ATH+ SEKL ++EEEL L +
Sbjct: 174 FPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHRAGIATHFVDSEKLHVLEEELLALKS 233
Query: 130 DDPSVIEACLEKY--SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEASLINDP 186
+ LE Y + DK+ + +D ++ CF +TVE+I+++L + S P
Sbjct: 234 PSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKINSCFSANTVEQILENLRQDGS----P 289
Query: 187 WCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS 229
+ ++++ + SP SLK++LR + EG +T E L EYR++
Sbjct: 290 FAMEQIKVINKMSPTSLKITLRQLMEGSTKTLQEVLTMEYRLT 332
>sp|A2VDC2|HIBCH_XENLA 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis
GN=hibch PE=2 SV=1
Length = 385
Score = 164 bits (415), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 138/238 (57%), Gaps = 10/238 (4%)
Query: 9 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIG 68
+DFFR Y +GT KP+VA+++G+TMGGG G+S+ G FRVA KT+FA PET IG
Sbjct: 113 AQDFFREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAMPETAIG 172
Query: 69 FHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLV 128
PD G ++L L G LG +LALTG +L G+++ G+ATH+ SEKL +E++L +
Sbjct: 173 LFPDVGGGYFLPRLTGKLGLYLALTGFRLKGSDVQKAGIATHFVESEKLSSLEQDLVAMK 232
Query: 129 TDDPSVIEACLEKYSDLVYPDKNS---VIHRIDIVDKCFGLDTVEEIIDSLESEASLIND 185
+ + L+ Y Y ++ + +D ++ F +TVEEI+++L+ + S
Sbjct: 233 SPSKENVADVLDSYQKKSYAAQDKPFVLAENMDKINSLFSGNTVEEIMENLKCDGS---- 288
Query: 186 PWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 243
+ L+ L SP SLK++ R ++EG + E L EYR+S ++ DFYE
Sbjct: 289 SFAMKQLQTLSTMSPTSLKITFRQLKEGASMSLQEVLTMEYRLSQACMN---GHDFYE 343
>sp|Q5ZJ60|HIBCH_CHICK 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus
GN=HIBCH PE=2 SV=1
Length = 385
Score = 160 bits (406), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 134/238 (56%), Gaps = 10/238 (4%)
Query: 9 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIG 68
+D+FR Y +GT KP+VA+++G+TMGGG G+S+ G FRVA KTVFA PET IG
Sbjct: 113 TRDYFREEYRLDNAIGTCKKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIG 172
Query: 69 FHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLV 128
PD G ++L L G +G LALTG +L G +++ G+ATH+ S KLP +E++L L
Sbjct: 173 LFPDVGGGYFLPRLSGKIGHLLALTGFRLKGRDVLKAGIATHFVESGKLPELEKDLIALK 232
Query: 129 TDDPSVIEACLEKYSDLVYPDKNS---VIHRIDIVDKCFGLDTVEEIIDSLESEASLIND 185
+ I L Y D+ + ++ ++ F +++EEI+ L+ + S
Sbjct: 233 SPSKENIADLLNSYHMQTKIDQEKEFVLDEHMERINSIFSANSMEEIVQKLKQDGS---- 288
Query: 186 PWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 243
P+ L + + SP SLK++LR +REG + + EYR+S Q R DFYE
Sbjct: 289 PFATKQLEAINKMSPTSLKLTLRQLREGATMSLQDVFTMEYRLS-QACMR--GHDFYE 343
>sp|Q58EB4|HIBCH_DANRE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio
GN=hibch PE=2 SV=1
Length = 382
Score = 160 bits (406), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 135/235 (57%), Gaps = 10/235 (4%)
Query: 12 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP 71
FFR Y +GT+ KP+VA++NG+TMGGG G+S+ G FRVA KT+FA PET IG P
Sbjct: 113 FFREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQFRVATEKTLFAMPETGIGLFP 172
Query: 72 DAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDD 131
D G ++L L G LG FLALTG +L G ++ G+ATH+ SEK+ +E++L L +
Sbjct: 173 DVGGGYFLPRLQGKLGLFLALTGFRLKGRDVQRVGVATHFVQSEKIESLEKDLVDLKSPS 232
Query: 132 PSVIEACLEKYSDLVYPDKNS---VIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWC 188
S + L+ Y + + D + + + +D+ F +VEEI+++L+ + S +
Sbjct: 233 ISDVAQLLDSYQEQSHLDAEKPFVLQEQTEAIDRLFSAGSVEEIVENLKKDGS----AFA 288
Query: 189 GSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 243
L + SP SLK++ R I EG + E + EYR+S ++ DFYE
Sbjct: 289 LKQAETLAKMSPTSLKLTFRQIEEGARMSLQEVFMMEYRLSQACMN---GHDFYE 340
>sp|Q55GS6|HIBCH_DICDI 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Dictyostelium
discoideum GN=hibch PE=3 SV=1
Length = 381
Score = 154 bits (389), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 128/233 (54%), Gaps = 7/233 (3%)
Query: 12 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP 71
FFR Y L+GT+ V+I NG MGGG G+S+ G FRVA TVFA PET IGF
Sbjct: 112 FFREEYILNNLIGTNPIAQVSIYNGFAMGGGIGLSVHGKFRVATENTVFAMPETGIGFFC 171
Query: 72 DAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDD 131
D G S++L LP + G +LALTG+KL G + G+ATH+ +E + +E+E+ +
Sbjct: 172 DVGGSYFLPRLPNNYGMYLALTGSKLKGNNVYLAGVATHFVSNEHIQALEKEIEECENPT 231
Query: 132 PSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGST 191
I + L KY D N + +++ FG ++V+EI + LE L N W T
Sbjct: 232 SQTINSILTKYHDKSKSTSNEYNDNLGDIERIFGKNSVKEIFEQLE---LLENSEWAKQT 288
Query: 192 LRLLKEASPLSLKVSLRSIREG-RFQTFDECLVREYRMSLQGVSRLISGDFYE 243
L+ LK SP SL V +++G + + +CL E+R+S + + DF+E
Sbjct: 289 LKTLKSVSPSSLMVVFEQMKQGAKLPSLAKCLEMEFRISQHFLEK---PDFFE 338
>sp|Q2HJ73|HIBCH_BOVIN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus
GN=HIBCH PE=2 SV=1
Length = 386
Score = 147 bits (370), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 134/223 (60%), Gaps = 7/223 (3%)
Query: 10 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF 69
+D FR Y + + KP++A+++G+TMGGG GVS+ G FRVA K+VFA PET IG
Sbjct: 115 QDLFREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVATEKSVFAMPETAIGL 174
Query: 70 HPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVT 129
PD G ++L L G LG FLALTG +L G ++ G+ATH+ EKL ++EE+L L +
Sbjct: 175 FPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDFEKLGMLEEDLLALKS 234
Query: 130 DDPSVIEACLEKYSDLVYPDKNS---VIHRIDIVDKCFGLDTVEEIIDSLESEASLINDP 186
I LE Y D++ + +D ++ F +TVE+I+D+L+ + S
Sbjct: 235 PSKENIADVLETYHAKSKTDQDKPFILEEHMDKINSWFSANTVEQIVDNLQQDGS----S 290
Query: 187 WCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS 229
+ L+++K+ SP SLK++LR + EG +T E L+ EYR+S
Sbjct: 291 FALEQLKVIKKMSPTSLKITLRQLMEGSSKTLPEVLIMEYRLS 333
>sp|O74802|HIBCH_SCHPO 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ehd3 PE=3 SV=1
Length = 429
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 136/255 (53%), Gaps = 6/255 (2%)
Query: 1 MNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 60
+ GKL E + F Y + L T+ KP VA++NG+TMGGG+G+++ FR+AC T+F
Sbjct: 126 IQDGKLPEVRHAFAQEYRLSHTLATYQKPVVALMNGITMGGGSGLAMHVPFRIACEDTMF 185
Query: 61 ATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI 120
A PET IG+ D ASF+ S LPG+ G +L LT + G + + G+ATH+ P +
Sbjct: 186 AMPETGIGYFTDVAASFFFSRLPGYFGTYLGLTSQIVKGYDCLRTGIATHFVPKHMFPHL 245
Query: 121 EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRI-DIVDKCFGLDTVEEIIDSLESE 179
E+ L +L T D S I + ++++ + + D+++KCF + +II +L+
Sbjct: 246 EDRLAELNTSDISKINNTILEFAEFASSSPPTFTPDVMDVINKCFCKNDTVDIIRALKEY 305
Query: 180 ASLIN--DPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLI 237
AS + + ST++ L SP S+ V+ R I+ + E ++ +S L
Sbjct: 306 ASNTSALAEFAKSTVKTLYSKSPTSIAVTNRLIKSAAKWSISEAFYYDHIVSYY---MLK 362
Query: 238 SGDFYEVSNFQILNK 252
DF E N Q++ K
Sbjct: 363 QPDFVEGVNAQLITK 377
>sp|P28817|HIBCH_YEAST 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=EHD3 PE=1
SV=2
Length = 500
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 137/267 (51%), Gaps = 28/267 (10%)
Query: 12 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP 71
FF YS + + T+LKP V ++G+TMGGG G+SI FR+A T +A PE IGF P
Sbjct: 120 FFTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFRIATENTKWAMPEMDIGFFP 179
Query: 72 DAGASFYLSHL------PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG 125
D G++F L + + +L LTG + GA+ GLA+HY SE L +++ LG
Sbjct: 180 DVGSTFALPRIVTLANSNSQMALYLCLTGEVVTGADAYMLGLASHYVSSENLDALQKRLG 239
Query: 126 KL---VTDDPS------VIEACLEKY-----SDLVYPDKNSVIHRIDIVDKCFGLD---T 168
++ +DP ++ ++++ D V+ N ++++++ CF L T
Sbjct: 240 EISPPFNNDPQSAYFFGMVNESIDEFVSPLPKDYVFKYSN---EKLNVIEACFNLSKNGT 296
Query: 169 VEEIIDSL-ESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVRE-Y 226
+E+I+++L + E S + L SP SL+++LR ++E + + R+ Y
Sbjct: 297 IEDIMNNLRQYEGSAEGKAFAQEIKTKLLTKSPSSLQIALRLVQENSRDHIESAIKRDLY 356
Query: 227 RMSLQGVSRLISGDFYEVSNFQILNKH 253
+ +++ +F E + ++++K
Sbjct: 357 TAANMCMNQDSLVEFSEATKHKLIDKQ 383
>sp|Q9T0K7|HIBC6_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial
OS=Arabidopsis thaliana GN=At4g13360 PE=1 SV=2
Length = 421
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 137/256 (53%), Gaps = 28/256 (10%)
Query: 9 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIG 68
+ F Y+ I + + KP++++++G+TMG G G+S G +RV +TV A PE IG
Sbjct: 129 VQKVFTAEYTLICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIG 188
Query: 69 FHPDAGASFYLSHLP--GHLGEFLALTGAKLNG-AEMMACGLATHYSVSEKLPLIEEE-L 124
PD G S+ +H P G +G +L LTG +++ ++ + GL THY SEKL ++E L
Sbjct: 189 LFPDVGFSYIAAHSPGGGSVGAYLGLTGKRISAPSDALFVGLGTHYVPSEKLASLKEAIL 248
Query: 125 GKLVTDDPSV-IEACLEKYSDLVYPDKNSVIHR-IDIVDKCFGLD-TVEEIIDSLE---- 177
+++DP+ I+A L KYS P+ + + + ++ F + +++E I+ L+
Sbjct: 249 SANLSEDPNQDIQATLSKYSS--NPESEAHLKSLLPHIESAFSSNKSIKETIEELKKYQQ 306
Query: 178 -SEASLINDPWCGSTLRLLKEASPLSLKVS---------LRSIREGRFQTFDECLVREYR 227
+E+S++ W L+ L++ +P SL ++ +S E T + + EYR
Sbjct: 307 STESSVVE--WANEALKGLEKGAPFSLYLTQKYFSNVACAKSKPENELATLNGVMKTEYR 364
Query: 228 MSLQGVSRLISGDFYE 243
++L+ R GDF E
Sbjct: 365 IALRSALR---GDFAE 377
>sp|Q9LK08|HIBC7_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial
OS=Arabidopsis thaliana GN=At3g24360 PE=2 SV=1
Length = 418
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 28/256 (10%)
Query: 9 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIG 68
+ F YS I + + KP++++++G+TMG G G+S G +RV +TV A PE IG
Sbjct: 126 VQKVFTAEYSLICKIAGYRKPYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIG 185
Query: 69 FHPDAGASFYLSHLPGH--LGEFLALTGAKLNG-AEMMACGLATHYSVSEKLPLIEEEL- 124
PD G S+ +H PG +G +L +TG +++ ++ + GL THY S KL + E +
Sbjct: 186 LFPDVGFSYIAAHSPGEGSVGAYLGMTGRRISTPSDALFVGLGTHYVPSGKLGSLREAIL 245
Query: 125 -GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHR-IDIVDKCFGLD-TVEEIIDSLE---- 177
L D I+A L YS P+ S + + ++ F + +V+E I+ L+
Sbjct: 246 SADLSKDPQQHIQATLSNYSS--DPETESHLQMLLPQIESAFSVSKSVKETIEELKKFQQ 303
Query: 178 -SEASLINDPWCGSTLRLLKEASPLSLKVSLRSIRE---------GRFQTFDECLVREYR 227
SEAS+ W ++ +++ +P SL ++ + + T + ++ EYR
Sbjct: 304 SSEASVAE--WANEAVQGIEKGAPFSLYLTHKYFSKVACAKGKTNNAMATLNGVMITEYR 361
Query: 228 MSLQGVSRLISGDFYE 243
++L+ R DF E
Sbjct: 362 IALRSALR---SDFTE 374
>sp|P40939|ECHA_HUMAN Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens
GN=HADHA PE=1 SV=2
Length = 763
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 6 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG--KTVFATP 63
L+E + + L KP VA +NG +GGG V+I +R+A KTV TP
Sbjct: 113 LQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTP 172
Query: 64 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 122
E L+G P AG + LP +G AL +MM G + ++K+ L+++
Sbjct: 173 EVLLGALPGAGGT---QRLPKMVGVPAAL--------DMMLTGRSIRADRAKKMGLVDQ 220
>sp|A8ALR7|CAID_CITK8 Carnitinyl-CoA dehydratase OS=Citrobacter koseri (strain ATCC
BAA-895 / CDC 4225-83 / SGSC4696) GN=caiD PE=3 SV=1
Length = 261
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL--PGH 85
KP +A +NG GGG +++ F V FA PE +G PD+G L L P
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 86 LGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG-KLVTDDPSVIEACLEKY 142
+ E L +TG +++ E + G+ + L EL +LV P I A E Y
Sbjct: 155 VNEML-MTGRRMDAEEALRWGIVNRVVSQQALMDSARELAQQLVNSAPLAIAALKEIY 211
>sp|B5BL54|CAID_SALPK Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain
AKU_12601) GN=caiD PE=3 SV=1
Length = 261
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGIVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIY 211
>sp|C0Q4L2|CAID_SALPC Carnitinyl-CoA dehydratase OS=Salmonella paratyphi C (strain
RKS4594) GN=caiD PE=3 SV=1
Length = 261
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGIVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIY 211
>sp|Q5PIL1|CAID_SALPA Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=caiD PE=3 SV=1
Length = 261
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGIVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIY 211
>sp|Q57TJ1|CAID_SALCH Carnitinyl-CoA dehydratase OS=Salmonella choleraesuis (strain
SC-B67) GN=caiD PE=3 SV=1
Length = 261
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGIVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIY 211
>sp|B5F749|CAID_SALA4 Carnitinyl-CoA dehydratase OS=Salmonella agona (strain SL483)
GN=caiD PE=3 SV=1
Length = 261
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGIVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIY 211
>sp|Q8Z9L5|CAID_SALTI Carnitinyl-CoA dehydratase OS=Salmonella typhi GN=caiD PE=3 SV=3
Length = 261
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGIVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIY 211
>sp|B5RGA4|CAID_SALG2 Carnitinyl-CoA dehydratase OS=Salmonella gallinarum (strain 287/91
/ NCTC 13346) GN=caiD PE=3 SV=1
Length = 261
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGVVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIY 211
>sp|B5R1Q9|CAID_SALEP Carnitinyl-CoA dehydratase OS=Salmonella enteritidis PT4 (strain
P125109) GN=caiD PE=3 SV=1
Length = 261
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGVVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIY 211
>sp|Q8ZRX5|CAID_SALTY Carnitinyl-CoA dehydratase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=caiD PE=3 SV=3
Length = 261
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGVVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIY 211
>sp|B4TWR3|CAID_SALSV Carnitinyl-CoA dehydratase OS=Salmonella schwarzengrund (strain
CVM19633) GN=caiD PE=3 SV=1
Length = 261
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGVVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIY 211
>sp|A9MYJ5|CAID_SALPB Carnitinyl-CoA dehydratase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=caiD PE=3 SV=1
Length = 261
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGVVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIY 211
>sp|B4TIG9|CAID_SALHS Carnitinyl-CoA dehydratase OS=Salmonella heidelberg (strain SL476)
GN=caiD PE=3 SV=1
Length = 261
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGVVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIY 211
>sp|B5FHG4|CAID_SALDC Carnitinyl-CoA dehydratase OS=Salmonella dublin (strain
CT_02021853) GN=caiD PE=3 SV=1
Length = 261
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGVVNRVVSQSELMDSARELAQQLVNSAPLAIAALKEIY 211
>sp|B4T6J5|CAID_SALNS Carnitinyl-CoA dehydratase OS=Salmonella newport (strain SL254)
GN=caiD PE=3 SV=1
Length = 261
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG +++ E + G+ S SE + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMSAEEALRWGVVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIY 211
>sp|Q8GB17|CAID_PROSL Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD
PE=1 SV=3
Length = 261
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYL-SHLPGHL 86
KP +A +NG GGG +++ + FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAINGYAFGGGFELALAADMIICSDNASFALPEAQLGIVPDSGGVLRLPKRLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG ++N E + G+A S +E + E ++ P + A E Y
Sbjct: 155 VNEMLMTGRRMNAQEALRWGIANRVVSATELMDSARELADQIANSAPLAVAALKEIY 211
>sp|B4EY26|CAID_PROMH Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320)
GN=caiD PE=3 SV=1
Length = 261
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYL-SHLPGHL 86
KP +A +NG GGG +++ + FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAINGYAFGGGFELALAADMIICSDNASFALPEAQLGIVPDSGGVLRLPKRLPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG ++N E + G+A S +E + E ++ P + A E Y
Sbjct: 155 VNEMLMTGRRMNAQEALRWGIANRVVSATELMDSARELADQIANSAPLAVAALKEIY 211
>sp|P31551|CAID_ECOLI Carnitinyl-CoA dehydratase OS=Escherichia coli (strain K12) GN=caiD
PE=1 SV=4
Length = 261
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG ++ E + G+ S +E + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIY 211
>sp|B1IRE0|CAID_ECOLC Carnitinyl-CoA dehydratase OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=caiD PE=3 SV=1
Length = 261
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG ++ E + G+ S +E + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIY 211
>sp|Q8XA35|CAID_ECO57 Carnitinyl-CoA dehydratase OS=Escherichia coli O157:H7 GN=caiD PE=3
SV=3
Length = 261
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG ++ E + G+ S +E + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIY 211
>sp|P59395|CAID_SHIFL Carnitinyl-CoA dehydratase OS=Shigella flexneri GN=caiD PE=3 SV=2
Length = 261
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPTI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG ++ E + G+ S +E + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIY 211
>sp|B1LFW9|CAID_ECOSM Carnitinyl-CoA dehydratase OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=caiD PE=3 SV=1
Length = 261
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG ++ E + G+ S +E + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMGAEEALRWGVVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIY 211
>sp|Q8FLA6|CAID_ECOL6 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=caiD PE=3 SV=3
Length = 261
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG ++ E + G+ S +E + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMGAEEALRWGVVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIY 211
>sp|Q0TLV3|CAID_ECOL5 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=caiD PE=3 SV=1
Length = 261
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F V FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 142
+ +TG ++ E + G+ S +E + E +LV P I A E Y
Sbjct: 155 VNEMVMTGRRMGAEEALRWGVVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIY 211
>sp|Q2TBT3|ECHD2_BOVIN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Bos taurus GN=ECHDC2 PE=2 SV=1
Length = 296
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 12 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP 71
F + L + + P +A ++G +GGG +++ RVA V ET G P
Sbjct: 114 FVQRLRGLMTEIAAFPAPTIAAMDGFALGGGLELALACDLRVAASSAVMGLIETTRGLLP 173
Query: 72 DAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATH 110
AG + L G L + L TG +L+GA+ A GL H
Sbjct: 174 GAGGTQRLPRCLGVALAKELIFTGRRLSGAQAQALGLVNH 213
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-L 86
KP +A +NG +GGG +++ R+A F PE +G P G + LS L G +
Sbjct: 98 KPVIAAVNGFALGGGCEIAMSCDIRIASSNARFGQPEVGLGITPGFGGTQRLSRLVGMGM 157
Query: 87 GEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEEELGKLVTDDPSVIE 136
+ L T + E + GL SE + +E K+V++ P ++
Sbjct: 158 AKQLIFTAQNIKADEALRIGLVNKVVEPSELMNTAKEIANKIVSNAPVAVK 208
>sp|Q3TLP5|ECHD2_MOUSE Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Mus musculus GN=Echdc2 PE=2 SV=2
Length = 296
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 8 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI 67
E F + L + + P +A ++G +GGG +++ R+A V ET
Sbjct: 110 EVGTFVQRLRGLMSEIAAFPVPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTR 169
Query: 68 GFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATH 110
G P AG + L G L + L TG +LNGA+ GL H
Sbjct: 170 GLLPGAGGTQRLPRCLGVALAKELIFTGRRLNGAQARELGLVNH 213
>sp|Q29554|ECHA_PIG Trifunctional enzyme subunit alpha, mitochondrial OS=Sus scrofa
GN=HADHA PE=1 SV=1
Length = 763
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVAC--GKTVFATPETLIGFHPDAGASFYLSHLPGH 85
KP VA +NG +GGG ++I +R+A KTV PE L+G P AG + L + G
Sbjct: 135 KPIVAAINGTCLGGGLELAISCQYRIATKDKKTVLGAPEVLLGILPGAGGTQRLPKMVGV 194
Query: 86 LGEF-LALTGAKLNGAEMMACGL 107
F + LTG + + GL
Sbjct: 195 PAAFDMMLTGRGIRADKAKKMGL 217
>sp|Q54HG7|AUHM_DICDI Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium
discoideum GN=auh PE=3 SV=1
Length = 303
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 8 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI 67
E F +L S L T P +A + GV +GGG + + FRVA + PET +
Sbjct: 121 EASQFVHSLRSSFTELETLQMPTIAAIEGVAVGGGTEMVLACDFRVASKSSKMGLPETGL 180
Query: 68 GFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATH 110
P AG + L L G + L TGA L+ + GL +
Sbjct: 181 AIIPGAGGTQRLPRLIGIPRAKELIFTGAILDSKRALEIGLVQY 224
>sp|A9MR28|CAID_SALAR Carnitinyl-CoA dehydratase OS=Salmonella arizonae (strain ATCC
BAA-731 / CDC346-86 / RSK2980) GN=caiD PE=3 SV=1
Length = 261
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 28 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL 86
KP +A +NG GGG +++ F + FA PE +G PD+G L LP +
Sbjct: 95 KPVIAAVNGYAFGGGFELALAADFIICADHASFALPEAKLGIVPDSGGVLRLPKILPPAI 154
Query: 87 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK-LVTDDPSVIEACLE 140
+ +TG ++ E + G+ +L EL + LV P + A E
Sbjct: 155 VNDMVMTGRRMTAEEALRWGVVNRVVSPHELLDSARELARQLVQSAPLAVAALKE 209
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,445,696
Number of Sequences: 539616
Number of extensions: 4182549
Number of successful extensions: 11181
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 10921
Number of HSP's gapped (non-prelim): 349
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)