BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025366
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UTC5|YIDE_SCHPO Putative uridine kinase C227.14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC227.14 PE=3 SV=1
Length = 235
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 91/148 (61%), Gaps = 14/148 (9%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
++GLAG PG+GKSTL A + K W ++ S ++ ++PMDGFH L +LD
Sbjct: 31 LIGLAGGPGSGKSTLCAILA----KAWNERFGS--------EIVKIIPMDGFHYSLEELD 78
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLR--NQGSVYAPSFDHGVGDPVEDDILVGLQ 226
++P++A A RGA WTF+ L + ++ ++ +YAPSFDH +GDPV DDI V +
Sbjct: 79 RFDNPEKARALRGAEWTFDADLFYSLVRLMKKITDRELYAPSFDHAIGDPVVDDICVEPK 138
Query: 227 HKVVIVDGNYLFLDGGVWKDVSSMFDEK 254
++++I +GNYL L+ W D ++D K
Sbjct: 139 NRILIFEGNYLLLNKPPWSDACKLYDIK 166
>sp|C5DNG5|YFH7_LACTC ATP-dependent kinase YFH7 OS=Lachancea thermotolerans (strain ATCC
56472 / CBS 6340 / NRRL Y-8284) GN=YFH7 PE=3 SV=1
Length = 347
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 51/215 (23%)
Query: 75 IPVVEARCMDEVYDAL-----AQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVR 129
IP E + + +V + Q P + N + +VG+ G P +
Sbjct: 81 IPKFEEKSLHDVQNGFFNHVQDQDFQPKKFVDKNDGSEVVVGIGGLPNS----------I 130
Query: 130 RINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFN-- 187
R+ + P + S+ D ++ A ++PMDGFHL LD +DP EAH RRG+P TF+
Sbjct: 131 RVENVAPLEPSNHDYKI-----AKIVPMDGFHLSRRHLDHFDDPVEAHRRRGSPPTFDSN 185
Query: 188 ------PLLLLNCL--------KNLRNQG---------------SVYAPSFDHGVGDPVE 218
LL C K + G S+Y P FDH + DP
Sbjct: 186 NCLQLCKLLAKTCTIKPTLPVNKTTADTGTLFDKISDTFSESVPSIYVPGFDHALKDPST 245
Query: 219 DDILVGLQHKVVIVDGNYLFLDGGVWKDVSSMFDE 253
V ++++++G YL LD W+D+ F +
Sbjct: 246 GQHCVDAFTRIIVLEGLYLLLDEDNWRDIYPTFKD 280
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 85 EVYDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIW 135
E + LA ++L + N + V + GPPG+GKST++ ++ IN +
Sbjct: 4 ETAEGLADQVLKFLSDKLETNYRVAVIVVGPPGSGKSTISEKLCHEINSRY 54
>sp|P11664|YGGC_ECOLI Uncharacterized protein YggC OS=Escherichia coli (strain K12)
GN=yggC PE=4 SV=2
Length = 237
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 88/179 (49%), Gaps = 25/179 (13%)
Query: 78 VEARCMDEVYDALAQRLLPTSALASNVNVKH--IVGLAGPPGAGKSTLAAEVVRRINKIW 135
++A+ +E + + + LL A VN + +V L PPG GKSTL W
Sbjct: 12 IQAQYQNEEIENVHKPLLHMLAALQTVNPQRRTVVFLCAPPGTGKSTLTT--------FW 63
Query: 136 PQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCL 195
A D ++ P + T LPMDGFH Y S LDA + +GAP TF+ +
Sbjct: 64 EYLAQQ-DPEL--PAIQT-LPMDGFHHYNSWLDA----HQLRPFKGAPETFD---VAKLT 112
Query: 196 KNLRN--QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDVSSMFD 252
+NLR +G P +D DPVED + V +VIV+GN+L LD W +++S D
Sbjct: 113 ENLRQVVEGDCTWPQYDRQKHDPVEDALHVTA--PLVIVEGNWLLLDDEKWLELASFCD 169
>sp|C7GYB3|YFH7_YEAS2 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
JAY291) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 202
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 203 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 240
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQKIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 241 GGVWKDV 247
WK +
Sbjct: 274 QENWKKI 280
>sp|P43591|YFH7_YEAST ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YFH7 PE=1 SV=1
Length = 353
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 202
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 203 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 240
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 241 GGVWKDV 247
WK +
Sbjct: 274 QENWKKI 280
>sp|A7A245|YFH7_YEAS7 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
YJM789) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 202
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 203 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 240
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 241 GGVWKDV 247
WK +
Sbjct: 274 QENWKKI 280
>sp|B5VI33|YFH7_YEAS6 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
AWRI1631) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 202
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 203 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 240
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 241 GGVWKDV 247
WK +
Sbjct: 274 QENWKKI 280
>sp|B3LUL5|YFH7_YEAS1 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 202
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 203 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 240
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 241 GGVWKDV 247
WK +
Sbjct: 274 QENWKKI 280
>sp|C8Z7U0|YFH7_YEAS8 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
Lalvin EC1118 / Prise de mousse) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 202
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 203 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 240
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 241 GGVWKDV 247
WK +
Sbjct: 274 QENWKKI 280
>sp|C5DXG0|YFH7_ZYGRC ATP-dependent kinase YFH7 OS=Zygosaccharomyces rouxii (strain ATCC
2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229)
GN=YFH7 PE=3 SV=1
Length = 375
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 43/168 (25%)
Query: 108 HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQL 167
I+G G P A + N + P + SSF A ++PMDGFHL L
Sbjct: 156 QILGRGGLPNAFTIS---------NDVEPDEESSF---------AQIVPMDGFHLSRQCL 197
Query: 168 DAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGS------------------------ 203
+ ++P+EAH RRG+P TF+ K L +
Sbjct: 198 SSFQNPQEAHKRRGSPPTFDSNNFAQLCKTLAQTCTIKPGSCDAKSCFEFMAKTYDPHFP 257
Query: 204 -VYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDVSSM 250
+ P FDH + DP D + ++VI++G YL D W+ V +
Sbjct: 258 CIKIPGFDHSLKDPTPDQFCLNGHTRIVILEGLYLLYDKENWQRVHEI 305
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 88 DALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWP-------QKAS 140
DALA + + N + + + GPPG+GKST+A ++ R+IN + QK++
Sbjct: 40 DALANEAIGLLDQCKDDNYRVCILIVGPPGSGKSTVAQDLSRQINHRFDEYRLQGNQKSA 99
Query: 141 SFDSQVKPPDVA 152
++ + DVA
Sbjct: 100 HGGTRSRASDVA 111
>sp|Q750K6|YFH7_ASHGO ATP-dependent kinase YFH7 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YFH7 PE=3 SV=1
Length = 334
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 56/124 (45%), Gaps = 27/124 (21%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNL----------R 199
++A V+PMDGFHL + LD D AH RRGAPWTF+ L K L R
Sbjct: 139 NIAEVVPMDGFHLSRAHLDHFADAAAAHKRRGAPWTFDSNNYLQLCKLLAATCKWKPAKR 198
Query: 200 NQGS---------------VYAPSFDHGVGDPVEDD-ILVGLQHKVVIVDGNYLFLDGGV 243
+G + P FDH DPV D +L G +V+I DG YL D
Sbjct: 199 PKGETLMETICDTFAQCPVISYPGFDHAAKDPVRDQHVLTGFT-RVLIFDGLYLLYDQEN 257
Query: 244 WKDV 247
W +
Sbjct: 258 WAHI 261
>sp|A7TQF3|YFH7_VANPO ATP-dependent kinase YFH7 OS=Vanderwaltozyma polyspora (strain ATCC
22028 / DSM 70294) GN=YFH7 PE=3 SV=1
Length = 359
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 33/131 (25%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNL----------- 198
++A ++PMDGFHL LD +DP AH RRG+P TF+ L K L
Sbjct: 156 NIAQIIPMDGFHLTRKCLDNFKDPVNAHRRRGSPSTFDSNNFLQLCKLLAETSNTKIPLS 215
Query: 199 RNQGS----------------------VYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 236
R Q S +Y P FDH + DP + + +++I +G Y
Sbjct: 216 RFQNSDNDDVDAVWEKLAKTFTSDVQDIYIPGFDHSLKDPTSNQYCINGFTRIMIFEGLY 275
Query: 237 LFLDGGVWKDV 247
L D W +
Sbjct: 276 LLYDQENWSKI 286
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 100 LASNVNVKHIVGLA--GPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPM 157
LA V+ + + L GPPG+GKST+A E+ R+N ++ + ++ V+ LP+
Sbjct: 15 LADRVDKNYRISLVIVGPPGSGKSTIANELCERLNSMFHEYLKEHGGNIEISGVSEPLPV 74
Query: 158 D 158
D
Sbjct: 75 D 75
>sp|Q6CNA8|YFH7_KLULA ATP-dependent kinase YFH7 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=YFH7 PE=3 SV=1
Length = 353
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 34/105 (32%)
Query: 149 PDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLK------------ 196
PD+A ++PMDGFHL LD +DP AH RRG+P+TF+ L K
Sbjct: 143 PDIAQIVPMDGFHLSRKHLDHFKDPTVAHLRRGSPFTFDSNNFLQLCKVLSKTCSLDPNY 202
Query: 197 --------NLRNQGSVYA--------------PSFDHGVGDPVED 219
N N S++ P FDH + DPV D
Sbjct: 203 HSTGPETVNEDNTNSLFDNVTNSFIDLPEISFPGFDHAIKDPVAD 247
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 87 YDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIW 135
YDAL + L N N + +G+ GPPG+GKST+A ++ +IN +
Sbjct: 4 YDALVDQALQLLEQNINKNYRVCIGIIGPPGSGKSTVAEKLKEKINSRY 52
>sp|Q6FUM2|YFH7_CANGA ATP-dependent kinase YFH7 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YFH7 PE=3
SV=1
Length = 345
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 28/128 (21%)
Query: 151 VATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG-------- 202
+A VLPMDGFHL LD DP+ AH RRG+ TF+ L + +
Sbjct: 148 IAEVLPMDGFHLSRECLDHFSDPQWAHLRRGSSLTFDSNNFLKLCEIMAKTSRIFPSIGY 207
Query: 203 --------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGG 242
SV P FDH + DP + + ++VI +G YL +
Sbjct: 208 DGDDFTAFDAISSSFDCSVPSVEVPGFDHSLKDPQPSQHTISFKSRIVIFEGLYLLYNKE 267
Query: 243 VWKDVSSM 250
W + ++
Sbjct: 268 NWSKIYNI 275
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 90 LAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPP 149
L + ++ + N + +V + GPPG+GKST+A ++ IN +S+ +K
Sbjct: 7 LKEEVIASYREICKENYRLLVFIVGPPGSGKSTIAEKLKDAIN-------TSYLDYLKEI 59
Query: 150 DVATVLPMDGFHLYLSQL 167
D T+ + H+ + Q
Sbjct: 60 DRKTLRCENYNHINIDQF 77
>sp|A1SF33|COAA_NOCSJ Pantothenate kinase OS=Nocardioides sp. (strain BAA-499 / JS614)
GN=coaA PE=3 SV=1
Length = 329
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 17/127 (13%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
++GLAG GKST A V++ + WPQ P+VA V DGF ++L+
Sbjct: 102 VIGLAGSVAVGKST-TARVLQEMLAHWPQH----------PNVALVT-TDGFLYPNAELE 149
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQH 227
+ R+G P +++ LL + ++++ + V AP++ H V D V D+ +V +
Sbjct: 150 R----RGLLERKGFPESYDRRALLKFVVDIKSGKDEVLAPTYSHLVYDVVPDEKVVIRRP 205
Query: 228 KVVIVDG 234
+VIV+G
Sbjct: 206 DIVIVEG 212
>sp|B2G996|COAA_LACRJ Pantothenate kinase OS=Lactobacillus reuteri (strain JCM 1112)
GN=coaA PE=3 SV=1
Length = 307
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 102 SNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFH 161
S + + +I+G+AG GKST+A + +NK+ P K ++ DGF
Sbjct: 78 STMRIPYIIGIAGSVAVGKSTIARLISILLNKMLPDKR------------VELMTTDGFL 125
Query: 162 LYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDD 220
++L + R+G P +++ LL L +++ + V AP++ H V D D
Sbjct: 126 YPNAELKR----RGIMDRKGFPESYDMERLLKFLNDVKAGEPVVKAPTYSHQVYDVQLDK 181
Query: 221 ILVGLQHKVVIVDG-NYLFLDGGVWKDVSSMFD 252
LV ++IV+G N L L VS FD
Sbjct: 182 PLVIDSPDILIVEGINTLQLPSNQQLYVSDYFD 214
>sp|A5VLY5|COAA_LACRD Pantothenate kinase OS=Lactobacillus reuteri (strain DSM 20016)
GN=coaA PE=3 SV=1
Length = 307
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 102 SNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFH 161
S + + +I+G+AG GKST+A + +NK+ P K ++ DGF
Sbjct: 78 STMRIPYIIGIAGSVAVGKSTIARLISILLNKMLPDKR------------VELMTTDGFL 125
Query: 162 LYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDD 220
++L + R+G P +++ LL L +++ + V AP++ H V D D
Sbjct: 126 YPNAELKR----RGIMDRKGFPESYDMERLLKFLNDVKAGEPVVKAPTYSHQVYDVQLDK 181
Query: 221 ILVGLQHKVVIVDG-NYLFLDGGVWKDVSSMFD 252
LV ++IV+G N L L VS FD
Sbjct: 182 PLVIDSPDILIVEGINTLQLPSNQQLYVSDYFD 214
>sp|P54556|COAA_BACSU Pantothenate kinase OS=Bacillus subtilis (strain 168) GN=coaA PE=3
SV=2
Length = 319
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 25/141 (17%)
Query: 103 NVNVKH--------IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATV 154
NV +KH I+G+AG GKST A +++++ P + P V ++
Sbjct: 77 NVFLKHPHSAKIPFIIGIAGSVAVGKST-TARILQKLLSRLPDR----------PKV-SL 124
Query: 155 LPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGV 213
+ DGF ++L K +R+G P +++ LL L +L++ + SV AP + H
Sbjct: 125 ITTDGFLFPTAELKK----KNMMSRKGFPESYDVKALLEFLNDLKSGKDSVKAPVYSHLT 180
Query: 214 GDPVEDDILVGLQHKVVIVDG 234
D E V Q +VI++G
Sbjct: 181 YDREEGVFEVVEQADIVIIEG 201
>sp|Q1WRY7|COAA_LACS1 Pantothenate kinase OS=Lactobacillus salivarius (strain UCC118)
GN=coaA PE=3 SV=1
Length = 306
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 25/152 (16%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLY-- 163
V I+G+AG GKST A + +++++P K ++ DGF LY
Sbjct: 82 VPFILGIAGSVAVGKSTTARLLQSLLSEVYPDKK------------VQLITTDGF-LYPN 128
Query: 164 --LSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDI 221
L + + ME R+G P +++ LL + +++N AP + H V D V+
Sbjct: 129 QELKRRNLME-------RKGFPESYDMRRLLRFVNDVKNNLPAKAPVYSHKVYDIVKGQY 181
Query: 222 LVGLQHKVVIVDG-NYLFLDGGVWKDVSSMFD 252
+ ++IV+G N L L VS FD
Sbjct: 182 EIVESPDILIVEGINVLQLPTNQQIYVSDFFD 213
>sp|B3W953|COAA_LACCB Pantothenate kinase OS=Lactobacillus casei (strain BL23) GN=coaA
PE=3 SV=1
Length = 308
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 99 ALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMD 158
+ N + I+G+AG GKST A + +++ +P+K + D
Sbjct: 76 GMQRNPHTPFIIGIAGSVAVGKSTTARLLQLLLSRAYPEKR------------VQQMTTD 123
Query: 159 GFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPV 217
GF LY +A + + R+G P +++ LL++ + N++N G++ AP + H + D V
Sbjct: 124 GF-LY---PNAELERRGILDRKGFPESYDMELLIHFMNNVKNASGALRAPKYSHQIYDIV 179
Query: 218 EDDILVGLQHKVVIVDG 234
+ + + ++IV+G
Sbjct: 180 PGEYELIDRPDILIVEG 196
>sp|Q036Y4|COAA_LACC3 Pantothenate kinase OS=Lactobacillus casei (strain ATCC 334)
GN=coaA PE=3 SV=1
Length = 308
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 99 ALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMD 158
+ N + I+G+AG GKST A + +++ +P+K + D
Sbjct: 76 GMQRNPHTPFIIGIAGSVAVGKSTTARLLQLLLSRAYPEKR------------VQQMTTD 123
Query: 159 GFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPV 217
GF LY +A + + R+G P +++ LL++ + N++N G++ AP + H + D V
Sbjct: 124 GF-LY---PNAELERRGILDRKGFPESYDMELLIHFMNNVKNASGALRAPKYSHQIYDIV 179
Query: 218 EDDILVGLQHKVVIVDG 234
+ + + ++IV+G
Sbjct: 180 PGEYELIDRPDILIVEG 196
>sp|O86779|COAA_STRCO Pantothenate kinase OS=Streptomyces coelicolor (strain ATCC BAA-471
/ A3(2) / M145) GN=coaA PE=3 SV=1
Length = 329
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Query: 101 ASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGF 160
S ++G+AG GKST+A +++ + WP+ P V V DGF
Sbjct: 94 GSQSGTPFVIGVAGSVAVGKSTVA-RLLQALLSRWPEH----------PRVELVT-TDGF 141
Query: 161 HLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVED 219
L +L+A + +R+G P +++ L + +++ + V AP + H + D V D
Sbjct: 142 LLPTRELEA----RGLMSRKGFPESYDRRALTRFVADIKAGKAEVTAPVYSHLIYDIVPD 197
Query: 220 DILVGLQHKVVIVDG 234
LV + ++IV+G
Sbjct: 198 QRLVVRRPDILIVEG 212
>sp|Q83EV9|COAA_COXBU Pantothenate kinase OS=Coxiella burnetii (strain RSA 493 / Nine
Mile phase I) GN=coaA PE=1 SV=1
Length = 318
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Query: 72 QREIPVVEARCMDEVYDALAQRLLPTSALASNV--------------NVKHIVGLAGPPG 117
Q +I +V + + E+Y L+ RLL A V +I+G+AG
Sbjct: 41 QGQIEIVSLKEVTEIYLPLS-RLLSFYVTARQTLQQATYQFLGKPEPKVPYIIGIAGSVA 99
Query: 118 AGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAH 177
GKST + V++ + WP P+V V+ DGF LY +A + +
Sbjct: 100 VGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---SNAKLEKQGLM 143
Query: 178 ARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 236
R+G P +++ LL L +++ Q +V P + H D V + Q +VI++G
Sbjct: 144 KRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQPDIVILEGLN 203
Query: 237 LFLDGGVWKDVSSM 250
+ L GV K + +
Sbjct: 204 I-LQTGVRKTLQQL 216
>sp|A9KD67|COAA_COXBN Pantothenate kinase OS=Coxiella burnetii (strain Dugway 5J108-111)
GN=coaA PE=3 SV=1
Length = 318
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Query: 72 QREIPVVEARCMDEVYDALAQRLLPTSALASNV--------------NVKHIVGLAGPPG 117
Q +I +V + + E+Y L+ RLL A V +I+G+AG
Sbjct: 41 QGQIEIVSLKEVTEIYLPLS-RLLSFYVTARQTLQQATYQFLGKPEPKVPYIIGIAGSVA 99
Query: 118 AGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAH 177
GKST + V++ + WP P+V V+ DGF LY +A + +
Sbjct: 100 VGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---SNAKLEKQGLM 143
Query: 178 ARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 236
R+G P +++ LL L +++ Q +V P + H D V + Q +VI++G
Sbjct: 144 KRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQPDIVILEGLN 203
Query: 237 LFLDGGVWKDVSSM 250
+ L GV K + +
Sbjct: 204 I-LQTGVRKTLQQL 216
>sp|A9NAJ3|COAA_COXBR Pantothenate kinase OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=coaA PE=3 SV=1
Length = 318
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Query: 72 QREIPVVEARCMDEVYDALAQRLLPTSALASNV--------------NVKHIVGLAGPPG 117
Q +I +V + + E+Y L+ RLL A V +I+G+AG
Sbjct: 41 QGQIEIVSLKEVTEIYLPLS-RLLSFYVTARQTLQQATYQFLGKPEPKVPYIIGIAGSVA 99
Query: 118 AGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAH 177
GKST + V++ + WP P+V V+ DGF LY +A + +
Sbjct: 100 VGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---SNAKLEKQGLM 143
Query: 178 ARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 236
R+G P +++ LL L +++ Q +V P + H D V + Q +VI++G
Sbjct: 144 KRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQPDIVILEGLN 203
Query: 237 LFLDGGVWKDVSSM 250
+ L GV K + +
Sbjct: 204 I-LQTGVRKTLQQL 216
>sp|B6J2J7|COAA_COXB2 Pantothenate kinase OS=Coxiella burnetii (strain CbuG_Q212) GN=coaA
PE=3 SV=1
Length = 318
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Query: 72 QREIPVVEARCMDEVYDALAQRLLPTSALASNV--------------NVKHIVGLAGPPG 117
Q +I +V + + E+Y L+ RLL A V +I+G+AG
Sbjct: 41 QGQIEIVSLKEVTEIYLPLS-RLLSFYVTARQTLQQATYQFLGKPEPKVPYIIGIAGSVA 99
Query: 118 AGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAH 177
GKST + V++ + WP P+V V+ DGF LY +A + +
Sbjct: 100 VGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---SNAKLEKQGLM 143
Query: 178 ARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 236
R+G P +++ LL L +++ Q +V P + H D V + Q +VI++G
Sbjct: 144 KRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQPDIVILEGLN 203
Query: 237 LFLDGGVWKDVSSM 250
+ L GV K + +
Sbjct: 204 I-LQTGVRKTLQQL 216
>sp|B6J596|COAA_COXB1 Pantothenate kinase OS=Coxiella burnetii (strain CbuK_Q154) GN=coaA
PE=3 SV=1
Length = 318
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Query: 72 QREIPVVEARCMDEVYDALAQRLLPTSALASNV--------------NVKHIVGLAGPPG 117
Q +I +V + + E+Y L+ RLL A V +I+G+AG
Sbjct: 41 QGQIEIVSLKEVTEIYLPLS-RLLSFYVTARQTLQQATYQFLGKPEPKVPYIIGIAGSVA 99
Query: 118 AGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAH 177
GKST + V++ + WP P+V V+ DGF LY +A + +
Sbjct: 100 VGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---SNAKLEKQGLM 143
Query: 178 ARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 236
R+G P +++ LL L +++ Q +V P + H D V + Q +VI++G
Sbjct: 144 KRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQPDIVILEGLN 203
Query: 237 LFLDGGVWKDVSSM 250
+ L GV K + +
Sbjct: 204 I-LQTGVRKTLQQL 216
>sp|Q38ZE2|COAA_LACSS Pantothenate kinase OS=Lactobacillus sakei subsp. sakei (strain
23K) GN=coaA PE=3 SV=1
Length = 309
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
I+G+AG GKST A + +++++P K ++ DGF S+L
Sbjct: 87 IIGIAGSVAVGKSTTARLLQLLLSRVYPDKT------------VQMITTDGFLYSTSELK 134
Query: 169 AMEDPKEAHARRGAPWTFN-PLLL--LNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGL 225
K ++G P +++ P L+ LN +KN N V AP + H + D + D+ +
Sbjct: 135 Q----KGILDKKGFPESYDMPQLISFLNAVKN--NVAPVKAPKYSHQIYDIIPDEFDIID 188
Query: 226 QHKVVIVDG-NYLFLDGGVWKDVSSMFD 252
++IV+G N L L VS FD
Sbjct: 189 DPDILIVEGINVLQLPTTEQIYVSDFFD 216
>sp|Q1D9X8|COAA_MYXXD Pantothenate kinase OS=Myxococcus xanthus (strain DK 1622) GN=coaA
PE=3 SV=1
Length = 317
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 26/153 (16%)
Query: 89 ALAQRLLPTSAL---ASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQ 145
A AQRL S V +I+ +AG GKST A +++ + K WP
Sbjct: 67 AAAQRLWAEQQAFLGGSTQKVPYIIAIAGSVAVGKST-TARILQALLKRWPDH------- 118
Query: 146 VKPPDVATVLPMDGFHL---YLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQ 201
P V V DGF L++ D M+ R+G P +++ L+ L L+ +
Sbjct: 119 ---PRVELV-TTDGFLFPNDVLTERDLMK-------RKGFPESYDRRALVRFLAELKAGR 167
Query: 202 GSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG 234
V AP + H V D V + V Q ++I++G
Sbjct: 168 AEVAAPVYSHLVYDVVPGEAQVVRQPDILILEG 200
>sp|Q839J7|COAA_ENTFA Pantothenate kinase OS=Enterococcus faecalis (strain ATCC 700802 /
V583) GN=coaA PE=3 SV=1
Length = 307
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 18/146 (12%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
I+G+AG GKST A + R + + + ++ ++ DGF LY +++
Sbjct: 85 IIGIAGSVAVGKSTTARLLQRILARTFKRRN------------VQLITTDGF-LYPNKV- 130
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQH 227
+E+ + R+G P +++ L+N L +++ + + AP + H V D +E + + Q
Sbjct: 131 -LEE-QGIMDRKGFPESYDMEKLINFLNEVKSGKDEIKAPVYSHSVYDVIEGEYELIQQP 188
Query: 228 KVVIVDG-NYLFLDGGVWKDVSSMFD 252
++IV+G N L L VS FD
Sbjct: 189 DILIVEGINTLQLPANQQIYVSDFFD 214
>sp|C0Z7P4|COAA_BREBN Pantothenate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 /
NBRC 100599) GN=coaA PE=3 SV=1
Length = 320
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 17/130 (13%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLS 165
V I+G+AG GKST A +++ + WP P V V DGF LY +
Sbjct: 88 VPFIIGIAGSVAVGKST-TARILQTLLSRWPNH----------PKVDLV-TTDGF-LYPN 134
Query: 166 QLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVG 224
++ +ED + R+G P +++ +N L ++++ V AP + H V D V D+
Sbjct: 135 KV--LED-RGIMKRKGFPESYDLRRFINFLSDVKSGLPEVKAPVYSHLVYDIVPDEWQTV 191
Query: 225 LQHKVVIVDG 234
Q ++IV+G
Sbjct: 192 RQPDILIVEG 201
>sp|P57967|COAA_PASMU Pantothenate kinase OS=Pasteurella multocida (strain Pm70) GN=coaA
PE=3 SV=1
Length = 316
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLS 165
V +I+ +AG GKST +A +++ + WP++ + D+ T DGF L
Sbjct: 91 VPYIISIAGSVAVGKST-SARILQSLLSQWPER--------RKVDLITT---DGF---LY 135
Query: 166 QLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVG 224
L ++ H ++G P +++ L+ L ++++ + V AP + H + D V D V
Sbjct: 136 PLAKLQQDNLLH-KKGFPVSYDTARLVRFLADIKSGKPKVSAPVYSHLIYDIVPDQFDVV 194
Query: 225 LQHKVVIVDG 234
Q ++I++G
Sbjct: 195 DQPDILILEG 204
>sp|A3Q967|COAA_SHELP Pantothenate kinase OS=Shewanella loihica (strain ATCC BAA-1088 /
PV-4) GN=coaA PE=3 SV=1
Length = 316
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 80 ARCMDEVYDALAQRLLPTSALASNVNVK--HIVGLAGPPGAGKSTLAAEVVRRINKIWPQ 137
+R ++ + A QR L + V K +I+ +AG GKST A +++ + + WP+
Sbjct: 59 SRLLNLIVGAKQQRGLVLNQFLGRVPPKRPYIISIAGSVAVGKST-TARILQALLRQWPE 117
Query: 138 KASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKN 197
P V V DGF LS+L + R+G P +++ LL+ +
Sbjct: 118 H----------PKVDLV-TTDGFLYPLSELKR----RGLLQRKGFPESYDMKLLVEFISK 162
Query: 198 LR-NQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG 234
++ + V+AP + H D V D Q ++I++G
Sbjct: 163 IKAGESLVHAPIYSHISYDRVADTQQAIEQPDILIIEG 200
>sp|B2GEA0|COAA_LACF3 Pantothenate kinase OS=Lactobacillus fermentum (strain NBRC 3956 /
LMG 18251) GN=coaA PE=3 SV=1
Length = 307
Score = 38.9 bits (89), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 102 SNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFH 161
S+ + +I+G+AG GKST A + + ++ P + ++ DGF
Sbjct: 78 SSRRIPYIIGIAGSVAVGKSTTARLLQILLKRLMPDRR------------IEMITTDGF- 124
Query: 162 LYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDD 220
LY + A + AR+G P +++ LL + ++ + V AP++ H V D +ED
Sbjct: 125 LYPN---AELKRRGIMARKGFPESYDMDRLLTFMNDVNAGEDQVTAPTYSHSVYDVMEDH 181
Query: 221 ILVGLQHKVVIVDG 234
+ ++IV+G
Sbjct: 182 PQTIYKPDILIVEG 195
>sp|Q7VPK9|COAA_HAEDU Pantothenate kinase OS=Haemophilus ducreyi (strain 35000HP / ATCC
700724) GN=coaA PE=3 SV=1
Length = 316
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLS 165
V +I+ LAG GKST +A +++ + WP + + D+ T DGF L+
Sbjct: 87 VPYIISLAGSVSVGKST-SARILQALLCQWPVE--------RKVDLITT---DGFLYPLA 134
Query: 166 QLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVG 224
L A K R+G P +++ L+ + +L++ + ++ AP + H D + D V
Sbjct: 135 ILQA----KNLLNRKGFPESYDIHRLIKFVSDLKSGERNIKAPIYSHLTYDIIPDRYSVV 190
Query: 225 LQHKVVIVDG 234
Q ++VI++G
Sbjct: 191 DQPEIVILEG 200
>sp|Q5M4T8|COAA_STRT2 Pantothenate kinase OS=Streptococcus thermophilus (strain ATCC
BAA-250 / LMG 18311) GN=coaA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
I+G++G GKST + + + + +P+ D+ T DGF L+ +Q+
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLQRTFPKAKV---------DMVTT---DGF-LFPNQVL 132
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHK 228
K R+G P +++ LLLN L ++N G V P + H + DI+ GL K
Sbjct: 133 I---DKGILNRKGFPESYDMPLLLNFLDTVKNGGDVNIPVYSHEIY-----DIVPGLTQK 184
Query: 229 VVIVDGNYLFLDG 241
I N+L ++G
Sbjct: 185 --ISQPNFLIVEG 195
>sp|Q5M079|COAA_STRT1 Pantothenate kinase OS=Streptococcus thermophilus (strain CNRZ
1066) GN=coaA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
I+G++G GKST + + + + +P+ D+ T DGF L+ +Q+
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLQRTFPKAKV---------DMVTT---DGF-LFPNQVL 132
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHK 228
K R+G P +++ LLLN L ++N G V P + H + DI+ GL K
Sbjct: 133 I---DKGILNRKGFPESYDMPLLLNFLDTVKNGGDVNIPVYSHEIY-----DIVPGLTQK 184
Query: 229 VVIVDGNYLFLDG 241
I N+L ++G
Sbjct: 185 --ISQPNFLIVEG 195
>sp|Q03L30|COAA_STRTD Pantothenate kinase OS=Streptococcus thermophilus (strain ATCC
BAA-491 / LMD-9) GN=coaA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
I+G++G GKST + + + + +P+ D+ T DGF L+ +Q+
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLQRTFPKAKV---------DMVTT---DGF-LFPNQVL 132
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHK 228
K R+G P +++ LLLN L ++N G V P + H + DI+ GL K
Sbjct: 133 I---DKGILNRKGFPESYDMPLLLNFLDTVKNGGDVNIPVYSHEIY-----DIVPGLTQK 184
Query: 229 VVIVDGNYLFLDG 241
I N+L ++G
Sbjct: 185 --ISQPNFLIVEG 195
>sp|A8AX56|COAA_STRGC Pantothenate kinase OS=Streptococcus gordonii (strain Challis /
ATCC 35105 / CH1 / DL1 / V288) GN=coaA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 24/134 (17%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLY----L 164
I+G++G GKST + R+ +I + +++V+ ++ DGF LY L
Sbjct: 86 IIGVSGSVAVGKSTTS-----RLLQILLSRTFE-NAKVE------LVTTDGF-LYPNSVL 132
Query: 165 SQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVG 224
+ D + R+G P ++N LLLN L +L+N + P + H + D V D
Sbjct: 133 QEHDLLN-------RKGFPESYNMELLLNFLDHLKNGQNYQVPVYSHEIYDIVPDQTQTI 185
Query: 225 LQHKVVIVDGNYLF 238
VIV+G +F
Sbjct: 186 QVADFVIVEGINVF 199
>sp|Q2NWS4|COAA_SODGM Pantothenate kinase OS=Sodalis glossinidius (strain morsitans)
GN=coaA PE=3 SV=1
Length = 316
Score = 38.5 bits (88), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGF---HL 162
+ +I+G+AG GKST A V++ + WP+ + ++ DGF +
Sbjct: 87 IPYIIGIAGSVAVGKST-TARVLQALLSRWPEHRT-----------VELVTTDGFLHPNS 134
Query: 163 YLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDI 221
L Q D M+ ++G P +++ L+N + +++ V AP + H + D V D+
Sbjct: 135 VLKQRDLMK-------KKGFPESYDIRSLVNFVSKVKSGTPRVTAPVYSHLIYDVVPDEQ 187
Query: 222 LVGLQHKVVIVDG 234
V Q ++I++G
Sbjct: 188 KVISQPDILILEG 200
>sp|A1R8P8|COAA_ARTAT Pantothenate kinase OS=Arthrobacter aurescens (strain TC1) GN=coaA
PE=3 SV=1
Length = 323
Score = 38.5 bits (88), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 27/153 (17%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
++G+AG GKST+ A V+R + + WP P+V ++ DGF L++L
Sbjct: 96 VIGVAGSVAVGKSTI-ARVLREMLRRWPGT----------PNVE-LITTDGFLYPLAEL- 142
Query: 169 AMEDPKEAH--ARRGAPWTFNPLLLLNCLKNLRNQG-SVYAPSFDHGVGDPVEDDILVGL 225
K H R+G P +++ LL + ++ V AP + H D V +V
Sbjct: 143 -----KRRHLLERKGFPESYDRRGLLRFVSEVKGGAEEVRAPWYSHVTYDIVPGKEVVVR 197
Query: 226 QHKVVIVDGNYLF------LDGGVWKDVSSMFD 252
+ V+IV+G + +DG VS FD
Sbjct: 198 RPDVLIVEGLNVLAPARPRMDGKQGLAVSDFFD 230
>sp|A1T0P0|COAA_PSYIN Pantothenate kinase OS=Psychromonas ingrahamii (strain 37) GN=coaA
PE=3 SV=1
Length = 322
Score = 38.5 bits (88), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 101 ASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGF 160
+ N NV +I+G+AG GKST A +++ I WP+ P VA V DGF
Sbjct: 88 SKNENVPYIIGIAGSVAVGKST-TARILQAILSHWPEH----------PRVALV-TTDGF 135
Query: 161 HLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVED 219
+L A + ++G P +F+ L++ + +++ + + AP + H D + D
Sbjct: 136 LRPNRELVA----RNIMHKKGFPESFDTKALIDFVAAIKSGKELISAPIYSHLTYDILPD 191
Query: 220 DILVGLQHKVVIVDG 234
L + +VI++G
Sbjct: 192 KKLHLEKPDIVILEG 206
>sp|Q9Z7H0|URK_CHLPN Uridine kinase OS=Chlamydia pneumoniae GN=udk PE=3 SV=1
Length = 222
Score = 38.1 bits (87), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 20/128 (15%)
Query: 111 GLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAM 170
G+ G GAGK+TL + I +I+ + S V+ D ++ S
Sbjct: 10 GITGGSGAGKTTLT----QNIKEIFGEDVS-------------VICQDNYYKDRSHYTPE 52
Query: 171 EDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVV 230
E A+ P F+ LL++ +K L+N V AP FD +G+ + +I KV+
Sbjct: 53 E---RANLIWDHPDAFDNDLLISDIKRLKNNEIVQAPVFDFVLGNRSKTEIETIYPSKVI 109
Query: 231 IVDGNYLF 238
+V+G +F
Sbjct: 110 LVEGILVF 117
>sp|Q9K8X7|COAA_BACHD Pantothenate kinase OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=coaA PE=3
SV=1
Length = 316
Score = 38.1 bits (87), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
I+GLAG GKST A +++++ K WP+ D+ T DGF L+
Sbjct: 90 IIGLAGSVAVGKST-TARLLQKLLKAWPEHHHV--------DLVTT---DGFLYPNETLE 137
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQH 227
A + ++G P +++ L+ L +++ + V AP + H + VE D V +
Sbjct: 138 A----RGLMDKKGFPESYDLPALIRFLSDVKAGEPYVKAPVYSHLTYNIVEGDYQVVHEP 193
Query: 228 KVVIVDG 234
+VIV+G
Sbjct: 194 DIVIVEG 200
>sp|B9JXX1|COAA_AGRVS Pantothenate kinase OS=Agrobacterium vitis (strain S4 / ATCC
BAA-846) GN=coaA PE=3 SV=1
Length = 330
Score = 38.1 bits (87), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 100 LASNVN-VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMD 158
L++NV I+G+AG GKST A V++ + WP P V V D
Sbjct: 93 LSTNVTKTPFIIGIAGSVAVGKST-TARVLKELLARWPSS----------PKVDLV-TTD 140
Query: 159 GFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPV 217
GF LY S + D K R+G P +++ LL L ++ Q +V AP + H D +
Sbjct: 141 GF-LY-SNATLVRDNK--LNRKGFPESYDTAALLRFLSAIKAGQQNVKAPRYSHLTYDVL 196
Query: 218 EDDILVGLQHKVVIVDGNYLF------LDGGVWKDVSSMFD 252
D + + ++I +G + DG + VS FD
Sbjct: 197 PDQHTIIDRPDILIFEGINVLQSRDLPRDGKIVPMVSDFFD 237
>sp|B4YNE3|V3_SPTNK Uncharacterized protein V3 OS=Sputnik virophage GN=ORF3 PE=4 SV=1
Length = 245
Score = 37.7 bits (86), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 107 KHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVL-----PMDGFH 161
+ ++ +AG G+GKST AA+ + K++P+ S++K ++ L P+D
Sbjct: 56 REVIYIAGQSGSGKSTYAAQYIYHYKKLFPKNKVFVFSRLKMAEILVSLGCIEIPIDD-- 113
Query: 162 LYLSQLDAMEDPKEA 176
L +DA+ D K+A
Sbjct: 114 -ELQDMDAIRDIKDA 127
>sp|P25697|KPPR_ARATH Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana
GN=At1g32060 PE=1 SV=1
Length = 395
Score = 37.7 bits (86), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIW-----PQKASSFDSQVKPPDVATVLPMDGFHLY 163
++GLA G GKST +RR+ ++ P K + DS D TV+ +D +H
Sbjct: 52 VIGLAADSGCGKSTF----MRRLTSVFGGAAKPPKGGNPDSNTLISDTTTVICLDDYH-- 105
Query: 164 LSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDH--GVGDPVE 218
LD KE P + L+ +K L+N +V P ++H G+ DP E
Sbjct: 106 --SLDRY-GRKEQKVTALDPRANDFDLMYEQVKALKNGIAVEKPIYNHVTGLLDPPE 159
>sp|B3GYJ4|COAA_ACTP7 Pantothenate kinase OS=Actinobacillus pleuropneumoniae serotype 7
(strain AP76) GN=coaA PE=3 SV=1
Length = 316
Score = 37.7 bits (86), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 17/130 (13%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLS 165
V +I+ +AG GKST +A +++ + WP + + D+ T DGF L+
Sbjct: 87 VPYIISIAGSVSVGKST-SARILQALLSQWPSE--------RKVDLITT---DGFLYPLT 134
Query: 166 QLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVG 224
L K+ R+G P +++ L+ + ++++ + + AP + H D + D V
Sbjct: 135 TLQE----KDLLKRKGFPESYDIHRLIQFVSDIKSGKRHIQAPIYSHLTYDIIPDQYNVV 190
Query: 225 LQHKVVIVDG 234
Q +VI++G
Sbjct: 191 DQPDIVILEG 200
>sp|B0BRA6|COAA_ACTPJ Pantothenate kinase OS=Actinobacillus pleuropneumoniae serotype 3
(strain JL03) GN=coaA PE=3 SV=1
Length = 316
Score = 37.7 bits (86), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 17/130 (13%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLS 165
V +I+ +AG GKST +A +++ + WP + + D+ T DGF L+
Sbjct: 87 VPYIISIAGSVSVGKST-SARILQALLSQWPSE--------RKVDLITT---DGFLYPLT 134
Query: 166 QLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVG 224
L K+ R+G P +++ L+ + ++++ + + AP + H D + D V
Sbjct: 135 TLQE----KDLLKRKGFPESYDIHRLIQFVSDIKSGKRHIQAPIYSHLTYDIIPDQYNVV 190
Query: 225 LQHKVVIVDG 234
Q +VI++G
Sbjct: 191 DQPDIVILEG 200
>sp|A3N2G1|COAA_ACTP2 Pantothenate kinase OS=Actinobacillus pleuropneumoniae serotype 5b
(strain L20) GN=coaA PE=3 SV=1
Length = 316
Score = 37.7 bits (86), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 17/130 (13%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLS 165
V +I+ +AG GKST +A +++ + WP + + D+ T DGF L+
Sbjct: 87 VPYIISIAGSVSVGKST-SARILQALLSQWPSE--------RKVDLITT---DGFLYPLT 134
Query: 166 QLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVG 224
L K+ R+G P +++ L+ + ++++ + + AP + H D + D V
Sbjct: 135 TLQE----KDLLKRKGFPESYDIHRLIQFVSDIKSGKRHIQAPIYSHLTYDIIPDQYNVV 190
Query: 225 LQHKVVIVDG 234
Q +VI++G
Sbjct: 191 DQPDIVILEG 200
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,498,460
Number of Sequences: 539616
Number of extensions: 4168600
Number of successful extensions: 24262
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 352
Number of HSP's that attempted gapping in prelim test: 24059
Number of HSP's gapped (non-prelim): 502
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)