Query 025368
Match_columns 254
No_of_seqs 161 out of 1526
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:55:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025368.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025368hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cmc_O GAPDH, glyceraldehyde-3 100.0 6.5E-56 2.2E-60 389.3 26.7 249 3-254 1-261 (334)
2 3v1y_O PP38, glyceraldehyde-3- 100.0 4.7E-56 1.6E-60 385.6 24.2 253 1-254 1-265 (337)
3 1gad_O D-glyceraldehyde-3-phos 100.0 8.7E-56 3E-60 388.2 25.9 249 3-254 1-260 (330)
4 1u8f_O GAPDH, glyceraldehyde-3 100.0 7.7E-56 2.6E-60 390.2 25.7 252 1-254 1-263 (335)
5 3pym_A GAPDH 3, glyceraldehyde 100.0 1.7E-55 5.7E-60 381.4 26.9 250 3-254 1-261 (332)
6 1hdg_O Holo-D-glyceraldehyde-3 100.0 2.1E-55 7.2E-60 385.8 26.0 248 4-254 1-261 (332)
7 3lvf_P GAPDH 1, glyceraldehyde 100.0 4.2E-55 1.4E-59 379.3 26.5 250 3-254 4-266 (338)
8 3doc_A Glyceraldehyde 3-phosph 100.0 1.8E-54 6.1E-59 375.4 25.5 249 3-254 2-263 (335)
9 4dib_A GAPDH, glyceraldehyde 3 100.0 1.6E-54 5.4E-59 376.2 24.2 249 3-254 4-264 (345)
10 3e5r_O PP38, glyceraldehyde-3- 100.0 5.4E-54 1.9E-58 378.0 26.6 254 1-254 1-265 (337)
11 3cps_A Glyceraldehyde 3-phosph 100.0 3.1E-54 1.1E-58 380.1 24.9 252 1-254 15-281 (354)
12 3ids_C GAPDH, glyceraldehyde-3 100.0 4.3E-54 1.5E-58 375.2 23.6 251 3-254 2-278 (359)
13 3h9e_O Glyceraldehyde-3-phosph 100.0 1.3E-53 4.5E-58 371.5 26.5 249 3-254 7-267 (346)
14 1rm4_O Glyceraldehyde 3-phosph 100.0 2.1E-53 7.2E-58 372.9 25.9 249 3-254 1-263 (337)
15 1obf_O Glyceraldehyde 3-phosph 100.0 3.4E-53 1.2E-57 369.5 26.7 249 3-254 1-264 (335)
16 2x5j_O E4PDH, D-erythrose-4-ph 100.0 2.3E-53 7.9E-58 374.1 25.6 249 3-254 2-265 (339)
17 2g82_O GAPDH, glyceraldehyde-3 100.0 4.9E-53 1.7E-57 370.0 26.2 247 4-254 1-259 (331)
18 2ep7_A GAPDH, glyceraldehyde-3 100.0 2.1E-53 7.1E-58 371.4 23.4 249 3-254 2-263 (342)
19 2b4r_O Glyceraldehyde-3-phosph 100.0 3E-53 1E-57 370.4 24.1 252 1-254 9-274 (345)
20 2d2i_A Glyceraldehyde 3-phosph 100.0 6.3E-53 2.2E-57 373.9 25.8 249 3-254 2-265 (380)
21 3b1j_A Glyceraldehyde 3-phosph 100.0 1.4E-52 4.7E-57 368.9 27.5 249 3-254 2-265 (339)
22 3hja_A GAPDH, glyceraldehyde-3 100.0 3.2E-53 1.1E-57 369.3 22.1 248 3-254 21-285 (356)
23 2r00_A Aspartate-semialdehyde 100.0 6E-45 2.1E-49 321.4 21.5 234 1-254 1-266 (336)
24 3pwk_A Aspartate-semialdehyde 100.0 2.9E-44 9.9E-49 318.7 19.8 232 3-254 2-274 (366)
25 3tz6_A Aspartate-semialdehyde 100.0 4E-44 1.4E-48 315.6 20.4 231 4-254 2-277 (344)
26 2yv3_A Aspartate-semialdehyde 100.0 9.7E-44 3.3E-48 312.9 22.2 228 4-254 1-260 (331)
27 2hjs_A USG-1 protein homolog; 100.0 8E-44 2.7E-48 314.7 19.9 232 2-254 5-268 (340)
28 4dpk_A Malonyl-COA/succinyl-CO 100.0 1.6E-44 5.4E-49 320.5 13.7 235 3-254 7-270 (359)
29 4dpl_A Malonyl-COA/succinyl-CO 100.0 1.6E-44 5.4E-49 320.5 12.0 235 3-254 7-270 (359)
30 3hsk_A Aspartate-semialdehyde 100.0 6.1E-44 2.1E-48 318.1 15.1 240 1-254 17-296 (381)
31 3uw3_A Aspartate-semialdehyde 100.0 3E-44 1E-48 319.5 11.1 233 3-254 4-304 (377)
32 3pzr_A Aspartate-semialdehyde 100.0 3.9E-44 1.3E-48 318.0 10.9 232 4-254 1-296 (370)
33 1t4b_A Aspartate-semialdehyde 100.0 8.2E-43 2.8E-47 310.5 12.9 234 4-254 2-296 (367)
34 2yyy_A Glyceraldehyde-3-phosph 100.0 3.6E-42 1.2E-46 303.7 14.5 226 2-254 1-248 (343)
35 3dr3_A N-acetyl-gamma-glutamyl 100.0 3.7E-42 1.3E-46 302.5 12.4 230 3-254 4-264 (337)
36 1vkn_A N-acetyl-gamma-glutamyl 100.0 2.5E-42 8.4E-47 304.3 9.0 227 3-254 13-269 (351)
37 1cf2_P Protein (glyceraldehyde 100.0 1.3E-41 4.5E-46 300.1 13.1 229 3-254 1-241 (337)
38 2ep5_A 350AA long hypothetical 100.0 9.6E-42 3.3E-46 302.7 11.1 235 2-254 3-266 (350)
39 2ozp_A N-acetyl-gamma-glutamyl 100.0 1E-40 3.5E-45 295.4 13.3 228 1-254 1-259 (345)
40 2nqt_A N-acetyl-gamma-glutamyl 100.0 3.1E-41 1.1E-45 298.6 9.4 234 1-254 7-270 (352)
41 1xyg_A Putative N-acetyl-gamma 100.0 1.6E-40 5.6E-45 295.3 8.8 229 1-254 14-277 (359)
42 1ys4_A Aspartate-semialdehyde 100.0 1E-39 3.4E-44 290.3 12.7 238 2-254 7-272 (354)
43 1b7g_O Protein (glyceraldehyde 100.0 4.3E-36 1.5E-40 265.1 14.3 222 3-254 1-241 (340)
44 2czc_A Glyceraldehyde-3-phosph 100.0 5.1E-33 1.7E-37 245.3 18.5 223 2-253 1-238 (334)
45 1nvm_B Acetaldehyde dehydrogen 99.1 1.5E-11 5.3E-16 106.9 3.6 213 1-251 1-225 (312)
46 4f3y_A DHPR, dihydrodipicolina 99.1 3.1E-11 1.1E-15 102.9 2.4 208 1-237 5-225 (272)
47 3qy9_A DHPR, dihydrodipicolina 98.9 6.5E-09 2.2E-13 87.1 9.9 186 1-237 1-200 (243)
48 1dih_A Dihydrodipicolinate red 98.8 5.6E-08 1.9E-12 82.8 11.2 204 1-237 3-224 (273)
49 3ijp_A DHPR, dihydrodipicolina 98.7 6.5E-09 2.2E-13 89.0 2.8 207 3-237 21-240 (288)
50 1p9l_A Dihydrodipicolinate red 98.5 6.1E-07 2.1E-11 75.1 10.4 184 4-236 1-197 (245)
51 1f06_A MESO-diaminopimelate D- 98.4 5.9E-07 2E-11 78.2 9.0 88 1-113 1-88 (320)
52 3bio_A Oxidoreductase, GFO/IDH 98.4 2.2E-07 7.5E-12 80.3 5.9 84 1-107 7-90 (304)
53 2ejw_A HDH, homoserine dehydro 98.3 3E-06 1E-10 74.0 9.2 84 1-108 1-93 (332)
54 3uuw_A Putative oxidoreductase 98.2 2.7E-07 9.4E-12 79.5 2.0 91 1-112 4-95 (308)
55 3fhl_A Putative oxidoreductase 98.2 1.1E-06 3.9E-11 77.5 5.8 91 1-112 3-94 (362)
56 3gdo_A Uncharacterized oxidore 98.2 8.5E-07 2.9E-11 78.2 4.8 91 1-112 3-94 (358)
57 3evn_A Oxidoreductase, GFO/IDH 98.2 7.8E-07 2.7E-11 77.5 4.5 94 1-112 3-96 (329)
58 3euw_A MYO-inositol dehydrogen 98.2 1.3E-06 4.4E-11 76.5 5.2 93 1-112 1-94 (344)
59 4ew6_A D-galactose-1-dehydroge 98.2 1.2E-06 4.2E-11 76.4 4.8 86 1-112 23-110 (330)
60 3rc1_A Sugar 3-ketoreductase; 98.1 8.6E-07 3E-11 77.9 3.0 93 1-112 25-118 (350)
61 3e18_A Oxidoreductase; dehydro 98.1 1.3E-06 4.3E-11 77.2 3.6 92 1-112 3-94 (359)
62 3kux_A Putative oxidoreductase 98.1 2.3E-06 7.8E-11 75.2 5.3 91 1-112 4-96 (352)
63 3e9m_A Oxidoreductase, GFO/IDH 98.1 7.7E-07 2.6E-11 77.6 2.1 94 1-112 3-96 (330)
64 3ec7_A Putative dehydrogenase; 98.1 1.1E-06 3.7E-11 77.5 2.8 95 1-112 21-116 (357)
65 3db2_A Putative NADPH-dependen 98.1 9.9E-07 3.4E-11 77.6 2.5 92 2-112 4-95 (354)
66 4hkt_A Inositol 2-dehydrogenas 98.1 1.8E-06 6.1E-11 75.2 3.6 91 2-112 2-92 (331)
67 3e82_A Putative oxidoreductase 98.1 3E-06 1E-10 74.9 4.7 85 3-107 7-92 (364)
68 3m2t_A Probable dehydrogenase; 98.0 2E-06 6.7E-11 75.9 3.5 90 1-107 3-93 (359)
69 4had_A Probable oxidoreductase 98.0 2.1E-06 7.4E-11 75.1 3.4 93 2-112 22-115 (350)
70 3ezy_A Dehydrogenase; structur 98.0 1.5E-06 5.2E-11 76.1 2.4 92 3-112 2-93 (344)
71 3ing_A Homoserine dehydrogenas 98.0 1.4E-05 4.7E-10 69.6 8.2 98 1-113 2-115 (325)
72 3f4l_A Putative oxidoreductase 98.0 6.1E-06 2.1E-10 72.2 5.8 91 3-112 2-94 (345)
73 1j5p_A Aspartate dehydrogenase 98.0 6.6E-06 2.3E-10 68.8 5.6 79 4-113 13-91 (253)
74 3ic5_A Putative saccharopine d 98.0 2.5E-06 8.4E-11 62.2 2.6 98 3-115 5-102 (118)
75 1tlt_A Putative oxidoreductase 98.0 2.5E-06 8.7E-11 73.8 3.0 87 1-107 3-90 (319)
76 3mz0_A Inositol 2-dehydrogenas 98.0 3.3E-06 1.1E-10 73.9 3.3 93 3-112 2-95 (344)
77 3i23_A Oxidoreductase, GFO/IDH 98.0 5.5E-06 1.9E-10 72.7 4.7 92 3-112 2-94 (349)
78 3q2i_A Dehydrogenase; rossmann 98.0 2.9E-06 1E-10 74.5 2.9 91 3-112 13-104 (354)
79 2ho3_A Oxidoreductase, GFO/IDH 97.9 8.6E-06 2.9E-10 70.6 4.7 87 3-107 1-87 (325)
80 3c1a_A Putative oxidoreductase 97.9 7.3E-06 2.5E-10 70.8 4.2 85 3-107 10-94 (315)
81 1h6d_A Precursor form of gluco 97.9 7.8E-06 2.7E-10 73.9 4.6 98 1-112 81-179 (433)
82 1vm6_A DHPR, dihydrodipicolina 97.9 0.00012 4E-09 60.1 10.8 135 4-190 13-155 (228)
83 3cea_A MYO-inositol 2-dehydrog 97.9 1.1E-05 3.8E-10 70.4 4.7 89 2-107 7-96 (346)
84 3mtj_A Homoserine dehydrogenas 97.8 2E-05 6.7E-10 71.4 6.2 89 2-112 9-107 (444)
85 4ina_A Saccharopine dehydrogen 97.8 1.5E-05 5.1E-10 71.5 5.2 146 4-158 2-157 (405)
86 1ydw_A AX110P-like protein; st 97.8 9.1E-06 3.1E-10 71.6 3.6 97 1-112 4-100 (362)
87 4fb5_A Probable oxidoreductase 97.8 1.3E-05 4.3E-10 70.9 4.5 90 1-107 23-119 (393)
88 3c8m_A Homoserine dehydrogenas 97.8 1.2E-05 4.1E-10 70.2 4.2 102 1-113 4-119 (331)
89 2ixa_A Alpha-N-acetylgalactosa 97.8 1.8E-05 6.3E-10 71.7 5.5 97 1-107 18-116 (444)
90 1lc0_A Biliverdin reductase A; 97.8 2.3E-05 7.9E-10 67.1 5.7 86 2-112 6-94 (294)
91 2dc1_A L-aspartate dehydrogena 97.8 2.5E-05 8.7E-10 64.6 5.5 75 4-107 1-75 (236)
92 4h3v_A Oxidoreductase domain p 97.8 4.1E-06 1.4E-10 74.0 0.7 94 1-112 4-104 (390)
93 3do5_A HOM, homoserine dehydro 97.8 1.8E-05 6.2E-10 68.9 4.5 101 3-114 2-114 (327)
94 3abi_A Putative uncharacterize 97.7 3.3E-05 1.1E-09 68.1 5.8 95 3-115 16-110 (365)
95 1xea_A Oxidoreductase, GFO/IDH 97.7 2.9E-05 1E-09 67.2 5.1 86 3-108 2-89 (323)
96 3ohs_X Trans-1,2-dihydrobenzen 97.7 1.4E-05 4.7E-10 69.6 3.0 92 3-112 2-95 (334)
97 3moi_A Probable dehydrogenase; 97.6 1.2E-05 4.2E-10 71.5 1.7 91 3-112 2-93 (387)
98 2vt3_A REX, redox-sensing tran 97.6 6.5E-05 2.2E-09 61.5 5.4 90 3-112 85-175 (215)
99 2p2s_A Putative oxidoreductase 97.6 3.6E-05 1.2E-09 67.0 3.7 93 1-112 2-95 (336)
100 3o9z_A Lipopolysaccaride biosy 97.6 8.9E-05 3E-09 64.0 6.1 91 3-112 3-101 (312)
101 3oa2_A WBPB; oxidoreductase, s 97.5 0.0001 3.5E-09 63.8 6.0 91 3-112 3-102 (318)
102 3upl_A Oxidoreductase; rossman 97.5 6.6E-05 2.3E-09 67.8 4.4 100 2-107 22-133 (446)
103 3u3x_A Oxidoreductase; structu 97.5 2.1E-05 7.1E-10 69.4 1.1 93 1-112 24-117 (361)
104 2dt5_A AT-rich DNA-binding pro 97.4 0.00011 3.8E-09 59.9 4.7 90 3-112 80-170 (211)
105 1zh8_A Oxidoreductase; TM0312, 97.4 6.4E-05 2.2E-09 65.6 3.4 92 3-112 18-111 (340)
106 4gqa_A NAD binding oxidoreduct 97.4 3E-05 1E-09 69.4 1.2 94 1-112 23-125 (412)
107 3dty_A Oxidoreductase, GFO/IDH 97.4 3.5E-05 1.2E-09 68.8 0.8 93 1-107 10-110 (398)
108 4gmf_A Yersiniabactin biosynth 97.4 0.00015 5.2E-09 64.2 4.8 84 3-107 7-95 (372)
109 3qvo_A NMRA family protein; st 97.3 0.00026 9E-09 58.1 5.8 98 1-115 21-126 (236)
110 2nvw_A Galactose/lactose metab 97.3 4.3E-05 1.5E-09 70.0 1.1 91 1-106 37-132 (479)
111 3ip3_A Oxidoreductase, putativ 97.3 2.7E-05 9.1E-10 67.9 -0.4 95 3-112 2-96 (337)
112 2nu8_A Succinyl-COA ligase [AD 97.3 0.00048 1.6E-08 58.8 7.4 85 3-112 7-94 (288)
113 3btv_A Galactose/lactose metab 97.3 2.5E-05 8.5E-10 70.7 -0.8 89 3-106 20-113 (438)
114 3keo_A Redox-sensing transcrip 97.3 0.00015 5E-09 59.2 3.7 92 3-111 84-177 (212)
115 3v5n_A Oxidoreductase; structu 97.3 4.9E-05 1.7E-09 68.3 1.0 92 1-107 35-135 (417)
116 1ebf_A Homoserine dehydrogenas 97.2 0.00014 4.8E-09 64.1 3.2 34 2-35 3-39 (358)
117 4huj_A Uncharacterized protein 97.2 4.8E-05 1.6E-09 62.3 -0.7 35 1-36 21-55 (220)
118 3dhn_A NAD-dependent epimerase 97.1 0.00067 2.3E-08 54.9 6.2 96 1-115 1-113 (227)
119 1y81_A Conserved hypothetical 97.1 0.0016 5.6E-08 49.2 7.4 82 3-112 14-99 (138)
120 2glx_A 1,5-anhydro-D-fructose 97.1 0.00024 8.2E-09 61.5 2.7 86 4-107 1-87 (332)
121 1oi7_A Succinyl-COA synthetase 97.0 0.0012 4.1E-08 56.3 6.9 85 3-112 7-94 (288)
122 3ius_A Uncharacterized conserv 97.0 0.0039 1.3E-07 52.2 9.9 90 2-112 4-100 (286)
123 3e48_A Putative nucleoside-dip 97.0 0.00056 1.9E-08 57.6 4.6 93 5-112 2-103 (289)
124 1hdo_A Biliverdin IX beta redu 97.0 0.001 3.5E-08 52.7 5.6 32 1-33 1-33 (206)
125 3gpi_A NAD-dependent epimerase 96.9 0.00083 2.8E-08 56.5 5.1 33 1-34 1-33 (286)
126 3slg_A PBGP3 protein; structur 96.9 0.0013 4.6E-08 57.3 6.6 34 1-34 22-56 (372)
127 3dqp_A Oxidoreductase YLBE; al 96.9 0.0021 7.2E-08 51.8 7.1 91 5-115 2-107 (219)
128 3oqb_A Oxidoreductase; structu 96.9 0.00025 8.5E-09 62.7 1.4 90 1-107 4-108 (383)
129 3d1l_A Putative NADP oxidoredu 96.9 0.00081 2.8E-08 56.2 4.3 87 3-112 10-99 (266)
130 3b1f_A Putative prephenate deh 96.9 0.00068 2.3E-08 57.5 3.8 84 1-104 4-88 (290)
131 3r6d_A NAD-dependent epimerase 96.8 0.00089 3.1E-08 54.1 4.1 97 1-112 3-105 (221)
132 2i76_A Hypothetical protein; N 96.8 0.00013 4.5E-09 61.7 -1.0 77 3-102 2-78 (276)
133 3ggo_A Prephenate dehydrogenas 96.8 0.0031 1.1E-07 54.3 7.6 89 2-112 32-125 (314)
134 2duw_A Putative COA-binding pr 96.8 0.0037 1.3E-07 47.6 7.2 84 3-112 13-100 (145)
135 2d59_A Hypothetical protein PH 96.8 0.0043 1.5E-07 47.2 7.5 82 3-112 22-107 (144)
136 3i6i_A Putative leucoanthocyan 96.8 0.0013 4.3E-08 57.0 4.8 103 1-115 8-120 (346)
137 3tri_A Pyrroline-5-carboxylate 96.7 0.00099 3.4E-08 56.5 4.0 26 1-26 1-26 (280)
138 2yv1_A Succinyl-COA ligase [AD 96.7 0.003 1E-07 54.0 6.8 85 3-112 13-100 (294)
139 3m2p_A UDP-N-acetylglucosamine 96.7 0.005 1.7E-07 52.3 8.1 89 2-112 1-106 (311)
140 2yv2_A Succinyl-COA synthetase 96.7 0.0046 1.6E-07 52.9 7.7 85 3-112 13-101 (297)
141 3nkl_A UDP-D-quinovosamine 4-d 96.7 0.0035 1.2E-07 47.0 6.2 93 2-112 3-98 (141)
142 3ff4_A Uncharacterized protein 96.6 0.0059 2E-07 45.2 7.0 84 3-115 4-92 (122)
143 1qyc_A Phenylcoumaran benzylic 96.6 0.0016 5.5E-08 55.1 4.4 102 1-115 1-114 (308)
144 1qyd_A Pinoresinol-lariciresin 96.6 0.0027 9.3E-08 53.8 5.7 102 1-115 1-117 (313)
145 4egb_A DTDP-glucose 4,6-dehydr 96.4 0.0041 1.4E-07 53.5 5.8 31 3-33 24-56 (346)
146 1iuk_A Hypothetical protein TT 96.4 0.0064 2.2E-07 46.0 6.1 84 3-112 13-100 (140)
147 3ruf_A WBGU; rossmann fold, UD 96.4 0.0062 2.1E-07 52.5 6.7 32 2-34 24-56 (351)
148 2rcy_A Pyrroline carboxylate r 96.3 0.0023 7.8E-08 53.2 3.3 75 1-103 2-79 (262)
149 2r6j_A Eugenol synthase 1; phe 96.2 0.0011 3.9E-08 56.5 1.3 98 4-115 12-116 (318)
150 3c1o_A Eugenol synthase; pheny 96.2 0.006 2E-07 52.0 5.4 101 3-115 4-114 (321)
151 3ew7_A LMO0794 protein; Q8Y8U8 96.2 0.0092 3.2E-07 47.6 6.2 90 4-112 1-100 (221)
152 2ph5_A Homospermidine synthase 96.1 0.0033 1.1E-07 57.0 3.7 95 3-112 13-111 (480)
153 3e8x_A Putative NAD-dependent 96.1 0.027 9.4E-07 45.6 9.1 95 2-115 20-132 (236)
154 1oc2_A DTDP-glucose 4,6-dehydr 96.1 0.006 2E-07 52.5 5.1 33 1-33 1-36 (348)
155 2z2v_A Hypothetical protein PH 96.1 0.0071 2.4E-07 53.2 5.6 94 3-114 16-109 (365)
156 3g79_A NDP-N-acetyl-D-galactos 96.1 0.012 3.9E-07 53.8 7.0 32 2-33 17-49 (478)
157 2bka_A CC3, TAT-interacting pr 96.0 0.012 4.2E-07 47.7 6.3 31 3-33 18-50 (242)
158 2wm3_A NMRA-like family domain 96.0 0.0014 4.9E-08 55.3 0.6 31 3-33 5-36 (299)
159 3c24_A Putative oxidoreductase 95.9 0.006 2E-07 51.5 4.3 84 3-112 11-98 (286)
160 1ur5_A Malate dehydrogenase; o 95.9 0.0039 1.3E-07 53.6 3.1 27 3-29 2-28 (309)
161 3ego_A Probable 2-dehydropanto 95.9 0.017 5.8E-07 49.4 6.9 86 3-103 2-88 (307)
162 2gas_A Isoflavone reductase; N 95.7 0.0089 3E-07 50.4 4.5 101 3-115 2-113 (307)
163 2x4g_A Nucleoside-diphosphate- 95.6 0.009 3.1E-07 51.2 4.0 30 3-33 13-43 (342)
164 3qsg_A NAD-binding phosphogluc 95.5 0.0054 1.8E-07 52.7 2.4 81 3-104 24-105 (312)
165 2b69_A UDP-glucuronate decarbo 95.5 0.095 3.2E-06 44.8 10.4 31 2-33 26-57 (343)
166 2c5a_A GDP-mannose-3', 5'-epim 95.5 0.035 1.2E-06 48.5 7.7 30 3-33 29-59 (379)
167 2axq_A Saccharopine dehydrogen 95.2 0.0073 2.5E-07 54.9 2.3 92 3-108 23-114 (467)
168 2zcu_A Uncharacterized oxidore 95.2 0.0088 3E-07 49.8 2.6 91 5-112 1-101 (286)
169 2g5c_A Prephenate dehydrogenas 95.2 0.017 5.7E-07 48.5 4.3 80 4-103 2-83 (281)
170 3g0o_A 3-hydroxyisobutyrate de 95.2 0.016 5.6E-07 49.3 4.2 28 3-31 7-34 (303)
171 2jl1_A Triphenylmethane reduct 95.1 0.0084 2.9E-07 50.0 2.3 93 5-112 2-104 (287)
172 2q1w_A Putative nucleotide sug 95.0 0.044 1.5E-06 46.9 6.7 31 2-33 20-51 (333)
173 3ehe_A UDP-glucose 4-epimerase 95.0 0.07 2.4E-06 45.0 7.9 28 4-33 2-30 (313)
174 2g1u_A Hypothetical protein TM 95.0 0.043 1.5E-06 41.7 5.8 30 3-33 19-48 (155)
175 2pv7_A T-protein [includes: ch 94.9 0.018 6.2E-07 49.0 3.9 64 4-103 22-86 (298)
176 1r0k_A 1-deoxy-D-xylulose 5-ph 94.9 0.021 7.1E-07 50.5 4.3 35 1-35 1-38 (388)
177 2x0j_A Malate dehydrogenase; o 94.9 0.0086 3E-07 51.1 1.7 25 4-28 1-25 (294)
178 4id9_A Short-chain dehydrogena 94.9 0.045 1.6E-06 46.9 6.3 30 3-33 19-49 (347)
179 3i83_A 2-dehydropantoate 2-red 94.9 0.04 1.4E-06 47.2 5.9 85 3-103 2-92 (320)
180 1ff9_A Saccharopine reductase; 94.8 0.022 7.6E-07 51.5 4.4 93 1-107 1-93 (450)
181 1t2d_A LDH-P, L-lactate dehydr 94.8 0.007 2.4E-07 52.3 1.0 29 1-29 1-30 (322)
182 1yqg_A Pyrroline-5-carboxylate 94.8 0.013 4.5E-07 48.5 2.6 23 4-26 1-23 (263)
183 3oh8_A Nucleoside-diphosphate 94.7 0.18 6.1E-06 46.1 10.2 30 3-33 147-177 (516)
184 1y6j_A L-lactate dehydrogenase 94.7 0.051 1.7E-06 46.8 6.1 25 3-27 7-31 (318)
185 2gn4_A FLAA1 protein, UDP-GLCN 94.7 0.027 9.2E-07 48.8 4.4 31 3-33 21-53 (344)
186 3hwr_A 2-dehydropantoate 2-red 94.6 0.041 1.4E-06 47.2 5.3 88 3-103 19-107 (318)
187 2fp4_A Succinyl-COA ligase [GD 94.6 0.059 2E-06 46.1 6.3 84 4-112 14-101 (305)
188 2raf_A Putative dinucleotide-b 94.6 0.075 2.6E-06 42.6 6.5 27 3-30 19-45 (209)
189 1xgk_A Nitrogen metabolite rep 94.6 0.037 1.3E-06 48.1 5.0 30 3-33 5-35 (352)
190 3a06_A 1-deoxy-D-xylulose 5-ph 94.5 0.039 1.3E-06 48.3 4.8 95 1-107 1-110 (376)
191 4gbj_A 6-phosphogluconate dehy 94.4 0.06 2.1E-06 45.8 5.8 29 1-31 4-32 (297)
192 3hn2_A 2-dehydropantoate 2-red 94.4 0.022 7.5E-07 48.7 3.1 84 3-103 2-90 (312)
193 1lld_A L-lactate dehydrogenase 94.3 0.027 9.3E-07 48.1 3.6 29 3-31 7-36 (319)
194 1r6d_A TDP-glucose-4,6-dehydra 94.3 0.16 5.4E-06 43.2 8.3 29 5-33 2-36 (337)
195 1ks9_A KPA reductase;, 2-dehyd 94.2 0.11 3.7E-06 43.3 7.0 81 5-103 2-84 (291)
196 3oj0_A Glutr, glutamyl-tRNA re 94.0 0.0077 2.6E-07 45.3 -0.5 31 4-36 22-52 (144)
197 3ko8_A NAD-dependent epimerase 94.0 0.2 6.9E-06 42.0 8.3 29 4-33 1-30 (312)
198 3g17_A Similar to 2-dehydropan 93.9 0.043 1.5E-06 46.5 4.0 23 3-25 2-24 (294)
199 2v6b_A L-LDH, L-lactate dehydr 93.9 0.057 2E-06 46.1 4.8 24 4-27 1-24 (304)
200 2ew2_A 2-dehydropantoate 2-red 93.8 0.06 2E-06 45.5 4.6 31 1-32 1-31 (316)
201 1id1_A Putative potassium chan 93.6 0.073 2.5E-06 40.2 4.5 33 1-34 1-33 (153)
202 4b8w_A GDP-L-fucose synthase; 93.6 0.057 1.9E-06 45.2 4.2 27 1-27 4-31 (319)
203 1np3_A Ketol-acid reductoisome 93.5 0.017 5.7E-07 50.2 0.7 75 3-100 16-90 (338)
204 3llv_A Exopolyphosphatase-rela 93.5 0.069 2.4E-06 39.6 4.1 30 3-33 6-35 (141)
205 2csu_A 457AA long hypothetical 93.4 0.29 9.8E-06 44.3 8.6 83 3-112 8-94 (457)
206 4f6c_A AUSA reductase domain p 93.4 0.63 2.2E-05 41.1 10.8 30 3-33 69-99 (427)
207 3nep_X Malate dehydrogenase; h 93.3 0.015 5.3E-07 50.0 0.1 25 4-28 1-25 (314)
208 3evt_A Phosphoglycerate dehydr 93.3 0.056 1.9E-06 46.7 3.6 28 4-32 138-165 (324)
209 1xq6_A Unknown protein; struct 93.2 0.12 4E-06 41.8 5.3 33 1-33 2-36 (253)
210 1bg6_A N-(1-D-carboxylethyl)-L 93.2 0.088 3E-06 45.4 4.7 30 1-31 2-31 (359)
211 3hg7_A D-isomer specific 2-hyd 93.1 0.056 1.9E-06 46.7 3.3 28 4-32 141-168 (324)
212 3ghy_A Ketopantoate reductase 92.9 0.09 3.1E-06 45.3 4.4 31 1-32 1-31 (335)
213 2hun_A 336AA long hypothetical 92.7 0.096 3.3E-06 44.5 4.3 33 1-33 1-35 (336)
214 2y1e_A 1-deoxy-D-xylulose 5-ph 92.6 0.13 4.5E-06 45.1 4.8 33 3-35 21-55 (398)
215 4e12_A Diketoreductase; oxidor 92.5 0.14 4.8E-06 43.0 5.0 30 2-32 3-32 (283)
216 3d4o_A Dipicolinate synthase s 92.5 0.089 3E-06 44.5 3.7 28 4-32 156-183 (293)
217 4b4o_A Epimerase family protei 92.4 0.14 4.6E-06 43.0 4.8 29 4-33 1-30 (298)
218 1lss_A TRK system potassium up 92.4 0.16 5.3E-06 37.1 4.6 30 3-33 4-33 (140)
219 1q0q_A 1-deoxy-D-xylulose 5-ph 92.3 0.14 4.9E-06 45.0 4.8 34 3-36 9-44 (406)
220 2o3j_A UDP-glucose 6-dehydroge 92.3 0.1 3.4E-06 47.6 4.0 33 1-33 7-40 (481)
221 1e6u_A GDP-fucose synthetase; 92.3 0.12 4.1E-06 43.6 4.2 31 1-32 1-32 (321)
222 3vku_A L-LDH, L-lactate dehydr 92.1 0.073 2.5E-06 46.0 2.7 26 3-28 9-34 (326)
223 2rir_A Dipicolinate synthase, 91.9 0.084 2.9E-06 44.8 2.9 28 4-32 158-185 (300)
224 2q3e_A UDP-glucose 6-dehydroge 91.9 0.12 4.1E-06 46.8 4.0 33 1-33 2-36 (467)
225 2a35_A Hypothetical protein PA 91.8 0.16 5.6E-06 40.0 4.4 31 3-33 5-37 (215)
226 3ldh_A Lactate dehydrogenase; 91.8 0.088 3E-06 45.6 2.9 26 3-28 21-46 (330)
227 3vps_A TUNA, NAD-dependent epi 91.8 0.16 5.5E-06 42.6 4.5 30 3-33 7-37 (321)
228 3au8_A 1-deoxy-D-xylulose 5-ph 91.7 0.15 5.1E-06 45.7 4.2 34 2-35 76-114 (488)
229 1evy_A Glycerol-3-phosphate de 91.7 0.098 3.3E-06 45.5 3.1 26 4-30 16-41 (366)
230 3mwd_B ATP-citrate synthase; A 91.5 0.57 2E-05 40.5 7.7 95 3-112 10-110 (334)
231 3p7m_A Malate dehydrogenase; p 91.5 0.23 7.7E-06 42.8 5.1 26 1-26 3-28 (321)
232 2izz_A Pyrroline-5-carboxylate 91.5 0.11 3.8E-06 44.5 3.1 26 1-26 20-45 (322)
233 2hmt_A YUAA protein; RCK, KTN, 91.4 0.17 5.7E-06 37.1 3.8 30 3-33 6-35 (144)
234 3doj_A AT3G25530, dehydrogenas 91.4 0.21 7.2E-06 42.5 4.8 29 2-31 20-48 (310)
235 4e21_A 6-phosphogluconate dehy 91.4 0.2 6.8E-06 43.8 4.7 28 3-31 22-49 (358)
236 3gg2_A Sugar dehydrogenase, UD 91.1 0.21 7.2E-06 45.0 4.7 30 1-32 1-30 (450)
237 3h2s_A Putative NADH-flavin re 90.9 0.26 9.1E-06 39.0 4.8 28 5-33 2-30 (224)
238 3d0o_A L-LDH 1, L-lactate dehy 90.9 0.22 7.4E-06 42.7 4.4 26 1-26 4-29 (317)
239 3gvi_A Malate dehydrogenase; N 90.8 0.23 7.9E-06 42.8 4.6 26 1-26 5-30 (324)
240 1x0v_A GPD-C, GPDH-C, glycerol 90.8 0.14 4.9E-06 44.1 3.3 25 1-25 6-30 (354)
241 3eag_A UDP-N-acetylmuramate:L- 90.8 0.59 2E-05 40.0 7.2 87 3-108 4-92 (326)
242 3pid_A UDP-glucose 6-dehydroge 90.8 0.25 8.6E-06 44.3 4.9 29 3-33 36-64 (432)
243 2vns_A Metalloreductase steap3 90.8 0.21 7.3E-06 40.0 4.1 28 3-31 28-55 (215)
244 4ezb_A Uncharacterized conserv 90.8 0.26 8.9E-06 42.1 4.8 84 3-103 24-108 (317)
245 3gt0_A Pyrroline-5-carboxylate 90.7 0.16 5.4E-06 41.6 3.3 24 3-26 2-25 (247)
246 3sxp_A ADP-L-glycero-D-mannohe 90.5 0.26 8.9E-06 42.4 4.7 32 3-34 10-43 (362)
247 1vpd_A Tartronate semialdehyde 90.4 0.22 7.6E-06 41.8 4.1 26 4-30 6-31 (299)
248 3dtt_A NADP oxidoreductase; st 90.4 0.28 9.6E-06 40.2 4.5 29 2-31 18-46 (245)
249 1sb8_A WBPP; epimerase, 4-epim 90.3 0.26 8.9E-06 42.2 4.4 31 2-33 26-57 (352)
250 3kkj_A Amine oxidase, flavin-c 90.3 0.26 8.8E-06 39.1 4.2 29 3-32 2-30 (336)
251 1f0y_A HCDH, L-3-hydroxyacyl-C 90.3 0.33 1.1E-05 41.0 5.0 29 3-32 15-43 (302)
252 3fwz_A Inner membrane protein 90.2 0.31 1.1E-05 36.1 4.3 30 4-34 8-37 (140)
253 4gwg_A 6-phosphogluconate dehy 90.2 0.22 7.5E-06 45.4 4.0 30 1-31 2-31 (484)
254 2iz1_A 6-phosphogluconate dehy 89.9 0.26 8.9E-06 44.7 4.3 29 1-30 3-31 (474)
255 3c7a_A Octopine dehydrogenase; 89.9 0.27 9.3E-06 43.3 4.3 30 3-32 2-31 (404)
256 2ahr_A Putative pyrroline carb 89.9 0.21 7.3E-06 41.0 3.4 27 3-30 3-29 (259)
257 2h78_A Hibadh, 3-hydroxyisobut 89.6 0.3 1E-05 41.1 4.2 28 3-31 3-30 (302)
258 3sc6_A DTDP-4-dehydrorhamnose 89.6 0.22 7.4E-06 41.3 3.2 29 4-33 6-35 (287)
259 3qha_A Putative oxidoreductase 89.5 0.24 8.1E-06 41.9 3.5 28 3-31 15-42 (296)
260 2hjr_A Malate dehydrogenase; m 89.5 0.35 1.2E-05 41.7 4.6 27 3-29 14-40 (328)
261 2uyy_A N-PAC protein; long-cha 89.4 0.34 1.2E-05 41.0 4.5 27 3-30 30-56 (316)
262 3dfz_A SIRC, precorrin-2 dehyd 89.4 0.44 1.5E-05 38.8 4.8 93 3-117 31-124 (223)
263 2dpo_A L-gulonate 3-dehydrogen 89.4 0.3 1E-05 42.0 4.0 30 2-32 5-34 (319)
264 4fgw_A Glycerol-3-phosphate de 89.3 0.63 2.2E-05 41.1 6.2 92 3-103 34-138 (391)
265 2z1m_A GDP-D-mannose dehydrata 89.3 0.38 1.3E-05 40.7 4.7 32 1-33 1-33 (345)
266 2zyd_A 6-phosphogluconate dehy 89.3 0.29 9.8E-06 44.5 4.0 30 1-31 13-42 (480)
267 4dll_A 2-hydroxy-3-oxopropiona 89.1 0.37 1.3E-05 41.1 4.5 28 3-31 31-58 (320)
268 1y7t_A Malate dehydrogenase; N 89.1 0.34 1.2E-05 41.5 4.2 28 1-28 1-30 (327)
269 2cvz_A Dehydrogenase, 3-hydrox 89.0 0.28 9.6E-06 40.8 3.6 26 4-31 2-27 (289)
270 3k96_A Glycerol-3-phosphate de 88.9 0.28 9.5E-06 42.8 3.6 28 3-31 29-56 (356)
271 2q1s_A Putative nucleotide sug 88.9 0.42 1.4E-05 41.4 4.8 31 3-33 32-63 (377)
272 1yb4_A Tartronic semialdehyde 88.8 0.24 8.4E-06 41.4 3.1 28 3-31 3-30 (295)
273 2bll_A Protein YFBG; decarboxy 88.7 0.49 1.7E-05 40.1 4.9 30 4-33 1-31 (345)
274 3st7_A Capsular polysaccharide 88.6 0.35 1.2E-05 41.8 4.0 30 4-33 1-31 (369)
275 2c20_A UDP-glucose 4-epimerase 88.5 0.48 1.6E-05 39.9 4.8 29 4-33 2-31 (330)
276 3cky_A 2-hydroxymethyl glutara 88.3 0.43 1.5E-05 40.0 4.2 28 3-31 4-31 (301)
277 2yy7_A L-threonine dehydrogena 88.2 0.34 1.2E-05 40.5 3.6 32 1-33 1-34 (312)
278 3l6d_A Putative oxidoreductase 87.9 0.45 1.5E-05 40.4 4.2 28 3-31 9-36 (306)
279 2ydy_A Methionine adenosyltran 87.9 0.58 2E-05 39.2 4.8 30 3-33 2-32 (315)
280 4h7p_A Malate dehydrogenase; s 87.8 0.41 1.4E-05 41.6 3.9 28 1-28 22-50 (345)
281 3tl2_A Malate dehydrogenase; c 87.8 0.62 2.1E-05 39.9 5.0 23 4-26 9-31 (315)
282 2ewd_A Lactate dehydrogenase,; 87.8 0.53 1.8E-05 40.1 4.5 29 1-29 1-30 (317)
283 3l4b_C TRKA K+ channel protien 87.8 0.37 1.3E-05 38.5 3.4 29 4-33 1-29 (218)
284 2hrz_A AGR_C_4963P, nucleoside 87.7 0.42 1.4E-05 40.6 3.9 26 1-26 12-38 (342)
285 1orr_A CDP-tyvelose-2-epimeras 87.7 0.55 1.9E-05 39.8 4.6 29 4-33 2-31 (347)
286 1rkx_A CDP-glucose-4,6-dehydra 87.6 0.51 1.7E-05 40.4 4.4 31 2-33 8-39 (357)
287 3pdu_A 3-hydroxyisobutyrate de 87.6 0.32 1.1E-05 40.7 3.1 27 4-31 2-28 (287)
288 1x7d_A Ornithine cyclodeaminas 87.6 0.18 6.1E-06 44.0 1.4 97 4-116 130-229 (350)
289 3pef_A 6-phosphogluconate dehy 87.3 0.63 2.2E-05 38.8 4.7 27 4-31 2-28 (287)
290 1b8p_A Protein (malate dehydro 87.3 0.49 1.7E-05 40.7 4.1 25 3-27 5-30 (329)
291 1i36_A Conserved hypothetical 87.1 0.6 2.1E-05 38.3 4.4 78 5-105 2-79 (264)
292 2x6t_A ADP-L-glycero-D-manno-h 87.1 0.55 1.9E-05 40.2 4.3 30 4-33 47-77 (357)
293 3rft_A Uronate dehydrogenase; 87.1 0.32 1.1E-05 40.1 2.6 31 1-32 1-32 (267)
294 1zcj_A Peroxisomal bifunctiona 86.9 0.73 2.5E-05 41.6 5.1 30 2-32 36-65 (463)
295 1y1p_A ARII, aldehyde reductas 86.8 0.81 2.8E-05 38.6 5.1 30 3-33 11-41 (342)
296 3c85_A Putative glutathione-re 86.7 0.55 1.9E-05 36.2 3.8 29 4-33 40-69 (183)
297 3fi9_A Malate dehydrogenase; s 86.6 0.52 1.8E-05 40.9 3.8 26 1-26 6-32 (343)
298 2f1k_A Prephenate dehydrogenas 86.5 0.73 2.5E-05 38.1 4.6 78 4-103 1-78 (279)
299 1jay_A Coenzyme F420H2:NADP+ o 86.4 0.83 2.8E-05 36.0 4.7 28 4-32 1-29 (212)
300 4hb9_A Similarities with proba 86.3 0.73 2.5E-05 39.8 4.7 28 4-32 2-29 (412)
301 3pqe_A L-LDH, L-lactate dehydr 86.1 0.75 2.6E-05 39.6 4.6 26 3-28 5-30 (326)
302 1ek6_A UDP-galactose 4-epimera 86.0 0.77 2.6E-05 38.9 4.6 31 2-33 1-32 (348)
303 3lk7_A UDP-N-acetylmuramoylala 86.0 1.5 5E-05 39.3 6.7 88 4-108 10-98 (451)
304 1yj8_A Glycerol-3-phosphate de 86.0 0.45 1.5E-05 41.5 3.2 23 3-25 21-43 (375)
305 3pp8_A Glyoxylate/hydroxypyruv 85.8 0.67 2.3E-05 39.7 4.0 28 4-32 140-167 (315)
306 1kew_A RMLB;, DTDP-D-glucose 4 85.7 0.67 2.3E-05 39.6 4.1 29 5-33 2-31 (361)
307 3enk_A UDP-glucose 4-epimerase 85.7 0.93 3.2E-05 38.3 5.0 30 3-33 5-35 (341)
308 1pzg_A LDH, lactate dehydrogen 85.7 0.65 2.2E-05 40.0 4.0 26 4-29 10-35 (331)
309 1z7e_A Protein aRNA; rossmann 85.6 0.76 2.6E-05 43.2 4.7 32 2-33 314-346 (660)
310 3mog_A Probable 3-hydroxybutyr 85.5 0.61 2.1E-05 42.4 3.9 29 3-32 5-33 (483)
311 1mv8_A GMD, GDP-mannose 6-dehy 85.5 0.66 2.2E-05 41.4 4.1 27 5-32 2-28 (436)
312 2gcg_A Glyoxylate reductase/hy 85.5 0.86 2.9E-05 39.1 4.7 28 4-32 156-183 (330)
313 4a9w_A Monooxygenase; baeyer-v 85.4 0.67 2.3E-05 39.1 4.0 32 1-33 1-32 (357)
314 3dfu_A Uncharacterized protein 85.3 0.3 1E-05 40.0 1.6 29 3-32 6-34 (232)
315 1t2a_A GDP-mannose 4,6 dehydra 85.3 0.94 3.2E-05 39.0 4.9 29 4-33 25-54 (375)
316 2pzm_A Putative nucleotide sug 85.1 1 3.5E-05 38.0 5.0 30 3-33 20-50 (330)
317 2dbq_A Glyoxylate reductase; D 85.1 0.9 3.1E-05 39.1 4.6 28 4-32 151-178 (334)
318 4g2n_A D-isomer specific 2-hyd 85.1 0.89 3.1E-05 39.4 4.6 28 4-32 174-201 (345)
319 1n7h_A GDP-D-mannose-4,6-dehyd 85.1 0.97 3.3E-05 39.0 4.9 29 4-33 29-58 (381)
320 2pi1_A D-lactate dehydrogenase 85.0 0.86 2.9E-05 39.3 4.4 28 4-32 142-169 (334)
321 1rpn_A GDP-mannose 4,6-dehydra 85.0 0.98 3.3E-05 38.1 4.8 31 3-34 14-45 (335)
322 1hyh_A L-hicdh, L-2-hydroxyiso 85.0 0.59 2E-05 39.6 3.4 23 4-26 2-24 (309)
323 3kd9_A Coenzyme A disulfide re 84.9 0.81 2.8E-05 40.7 4.4 33 1-33 1-34 (449)
324 4dgs_A Dehydrogenase; structur 84.9 0.93 3.2E-05 39.3 4.6 28 4-32 172-199 (340)
325 2y0c_A BCEC, UDP-glucose dehyd 84.8 0.92 3.1E-05 41.1 4.7 30 3-33 8-37 (478)
326 3ay3_A NAD-dependent epimerase 84.8 0.36 1.2E-05 39.5 1.9 30 3-33 2-32 (267)
327 3ba1_A HPPR, hydroxyphenylpyru 84.5 0.81 2.8E-05 39.5 4.0 28 4-32 165-192 (333)
328 3hhp_A Malate dehydrogenase; M 84.5 0.55 1.9E-05 40.2 2.9 22 4-25 1-23 (312)
329 2qyt_A 2-dehydropantoate 2-red 84.4 0.63 2.2E-05 39.1 3.3 23 3-25 8-30 (317)
330 1dlj_A UDP-glucose dehydrogena 84.4 0.88 3E-05 40.2 4.3 27 5-33 2-28 (402)
331 2d0i_A Dehydrogenase; structur 84.3 0.99 3.4E-05 38.9 4.5 28 4-32 147-174 (333)
332 1qp8_A Formate dehydrogenase; 84.2 0.92 3.2E-05 38.5 4.2 28 4-32 125-152 (303)
333 2w2k_A D-mandelate dehydrogena 84.2 1 3.5E-05 39.0 4.6 28 4-32 164-192 (348)
334 1ldn_A L-lactate dehydrogenase 84.1 1 3.5E-05 38.4 4.5 24 3-26 6-29 (316)
335 3gg9_A D-3-phosphoglycerate de 84.0 1 3.5E-05 39.2 4.4 28 4-32 161-188 (352)
336 1xdw_A NAD+-dependent (R)-2-hy 83.9 1.1 3.8E-05 38.5 4.6 28 4-32 147-174 (331)
337 3k6j_A Protein F01G10.3, confi 83.9 1 3.5E-05 40.6 4.6 30 2-32 53-82 (460)
338 3nzo_A UDP-N-acetylglucosamine 83.8 0.85 2.9E-05 40.1 4.0 31 3-33 35-66 (399)
339 2rh8_A Anthocyanidin reductase 83.7 1.2 4.3E-05 37.5 4.9 30 3-33 9-39 (338)
340 2cuk_A Glycerate dehydrogenase 83.7 1.1 3.9E-05 38.1 4.6 27 4-31 145-171 (311)
341 3iwa_A FAD-dependent pyridine 83.7 0.79 2.7E-05 41.1 3.8 33 1-33 1-34 (472)
342 3gvx_A Glycerate dehydrogenase 83.6 0.89 3E-05 38.4 3.8 28 4-32 123-150 (290)
343 1z82_A Glycerol-3-phosphate de 83.6 1.2 4.1E-05 38.1 4.7 27 3-30 14-40 (335)
344 3jtm_A Formate dehydrogenase, 83.5 1 3.6E-05 39.1 4.3 28 4-32 165-192 (351)
345 1ez4_A Lactate dehydrogenase; 83.5 1 3.4E-05 38.6 4.2 25 4-28 6-30 (318)
346 1oju_A MDH, malate dehydrogena 83.5 0.87 3E-05 38.6 3.7 25 4-28 1-25 (294)
347 1mx3_A CTBP1, C-terminal bindi 83.3 1.2 4E-05 38.7 4.6 28 4-32 169-196 (347)
348 1dxy_A D-2-hydroxyisocaproate 83.3 1.2 4.1E-05 38.3 4.6 28 4-32 146-173 (333)
349 2ywl_A Thioredoxin reductase r 83.2 1.3 4.4E-05 33.8 4.4 30 3-33 1-30 (180)
350 2yq5_A D-isomer specific 2-hyd 83.2 1.1 3.9E-05 38.7 4.4 28 4-32 149-176 (343)
351 1gdh_A D-glycerate dehydrogena 83.1 1.3 4.5E-05 37.9 4.8 28 4-32 147-174 (320)
352 2cul_A Glucose-inhibited divis 83.1 1.1 3.9E-05 35.9 4.2 32 1-33 1-32 (232)
353 2ekl_A D-3-phosphoglycerate de 83.0 1.3 4.3E-05 37.8 4.6 28 4-32 143-170 (313)
354 3oet_A Erythronate-4-phosphate 83.0 1.2 4E-05 39.3 4.4 28 4-32 120-147 (381)
355 1smk_A Malate dehydrogenase, g 83.0 0.67 2.3E-05 39.8 2.9 24 3-26 8-32 (326)
356 1wwk_A Phosphoglycerate dehydr 82.9 1.3 4.4E-05 37.7 4.6 28 4-32 143-170 (307)
357 2gf2_A Hibadh, 3-hydroxyisobut 82.9 0.88 3E-05 37.9 3.5 26 5-31 2-27 (296)
358 4e5n_A Thermostable phosphite 82.8 0.96 3.3E-05 38.9 3.8 28 4-32 146-173 (330)
359 2g76_A 3-PGDH, D-3-phosphoglyc 82.7 1.4 4.7E-05 38.1 4.8 28 4-32 166-193 (335)
360 1yo6_A Putative carbonyl reduc 82.6 1.4 4.9E-05 35.2 4.6 33 1-33 1-35 (250)
361 3vtf_A UDP-glucose 6-dehydroge 82.6 1.1 3.7E-05 40.3 4.1 30 3-33 21-50 (444)
362 2o4c_A Erythronate-4-phosphate 82.5 1.2 4.2E-05 39.1 4.4 28 4-32 117-144 (380)
363 4hy3_A Phosphoglycerate oxidor 82.5 1.2 4.1E-05 38.9 4.3 28 4-32 177-204 (365)
364 1j4a_A D-LDH, D-lactate dehydr 82.5 1.4 4.6E-05 38.0 4.6 28 4-32 147-174 (333)
365 3d1c_A Flavin-containing putat 82.4 1.2 4.2E-05 37.9 4.3 26 1-26 2-27 (369)
366 1db3_A GDP-mannose 4,6-dehydra 82.4 1.4 4.7E-05 37.7 4.7 29 4-33 2-31 (372)
367 2yjz_A Metalloreductase steap4 82.9 0.27 9.1E-06 39.2 0.0 27 3-30 19-45 (201)
368 3kb6_A D-lactate dehydrogenase 82.2 1.3 4.5E-05 38.1 4.4 28 4-32 142-169 (334)
369 2pk3_A GDP-6-deoxy-D-LYXO-4-he 82.0 1.5 5.3E-05 36.5 4.8 30 3-33 12-42 (321)
370 3fbs_A Oxidoreductase; structu 82.0 1.4 4.9E-05 36.0 4.5 30 3-33 2-31 (297)
371 1guz_A Malate dehydrogenase; o 81.9 1.6 5.3E-05 37.1 4.8 28 4-31 1-29 (310)
372 1txg_A Glycerol-3-phosphate de 81.8 1.2 4.2E-05 37.7 4.1 27 5-32 2-28 (335)
373 1i24_A Sulfolipid biosynthesis 81.6 1.4 5E-05 38.1 4.6 30 3-33 11-41 (404)
374 2zqz_A L-LDH, L-lactate dehydr 81.6 1.4 4.9E-05 37.7 4.5 26 3-28 9-34 (326)
375 3phh_A Shikimate dehydrogenase 81.4 4.5 0.00015 33.7 7.3 26 4-30 119-144 (269)
376 2vou_A 2,6-dihydroxypyridine h 81.4 1.7 5.9E-05 37.7 5.0 31 2-33 4-34 (397)
377 2dkn_A 3-alpha-hydroxysteroid 81.4 1.8 6.1E-05 34.7 4.8 29 4-33 2-31 (255)
378 2xdo_A TETX2 protein; tetracyc 81.4 1.8 6.2E-05 37.6 5.1 30 3-33 26-55 (398)
379 4ea9_A Perosamine N-acetyltran 81.3 1.8 6.1E-05 34.5 4.7 32 2-34 11-42 (220)
380 1vl0_A DTDP-4-dehydrorhamnose 80.9 1.4 4.8E-05 36.3 4.1 30 3-33 12-42 (292)
381 3obb_A Probable 3-hydroxyisobu 80.9 1.4 4.6E-05 37.4 4.0 28 3-31 3-30 (300)
382 3u62_A Shikimate dehydrogenase 80.8 0.63 2.1E-05 38.5 1.8 31 5-36 110-140 (253)
383 1kyq_A Met8P, siroheme biosynt 80.8 1.4 4.9E-05 36.9 4.0 29 4-33 14-42 (274)
384 1sc6_A PGDH, D-3-phosphoglycer 80.7 1.5 5.3E-05 38.8 4.4 28 4-32 146-173 (404)
385 3ado_A Lambda-crystallin; L-gu 80.6 1.4 4.7E-05 37.8 3.9 28 4-32 7-34 (319)
386 2bi7_A UDP-galactopyranose mut 80.5 1.9 6.6E-05 37.6 5.0 32 1-33 1-32 (384)
387 1eq2_A ADP-L-glycero-D-mannohe 80.4 1.7 5.8E-05 36.0 4.4 29 5-33 1-30 (310)
388 3alj_A 2-methyl-3-hydroxypyrid 80.4 1.8 6.1E-05 37.3 4.7 32 1-33 9-40 (379)
389 2p5y_A UDP-glucose 4-epimerase 80.4 1.9 6.4E-05 35.9 4.7 28 5-33 2-30 (311)
390 1n2s_A DTDP-4-, DTDP-glucose o 80.4 1.4 4.8E-05 36.4 3.9 27 5-33 2-29 (299)
391 2bma_A Glutamate dehydrogenase 80.3 7.8 0.00027 34.9 8.9 92 4-112 253-365 (470)
392 2v6g_A Progesterone 5-beta-red 80.1 1.4 4.8E-05 37.5 3.9 30 4-33 2-36 (364)
393 2nac_A NAD-dependent formate d 80.1 1.6 5.5E-05 38.5 4.3 28 4-32 192-219 (393)
394 1yvv_A Amine oxidase, flavin-c 80.0 1.6 5.5E-05 36.6 4.2 30 3-33 2-31 (336)
395 3d7l_A LIN1944 protein; APC893 80.0 2.2 7.5E-05 33.0 4.7 29 3-33 3-32 (202)
396 4aj2_A L-lactate dehydrogenase 79.6 2.3 7.9E-05 36.6 5.1 26 2-27 18-43 (331)
397 3ngx_A Bifunctional protein fo 79.4 1.5 5.1E-05 36.8 3.7 27 4-31 151-178 (276)
398 3fef_A Putative glucosidase LP 79.1 1.1 3.8E-05 40.3 3.0 28 1-28 3-32 (450)
399 1mld_A Malate dehydrogenase; o 79.1 1.2 4.1E-05 38.0 3.1 23 4-26 1-24 (314)
400 1pjq_A CYSG, siroheme synthase 79.1 4.3 0.00015 36.4 6.9 85 4-108 13-99 (457)
401 3k5p_A D-3-phosphoglycerate de 79.0 1.9 6.5E-05 38.4 4.4 28 4-32 157-184 (416)
402 3bfp_A Acetyltransferase; LEFT 79.0 1.7 5.7E-05 34.1 3.7 31 1-32 1-31 (194)
403 1a5z_A L-lactate dehydrogenase 78.9 1.7 5.8E-05 37.0 4.0 23 4-26 1-23 (319)
404 2pgd_A 6-phosphogluconate dehy 78.8 1.6 5.6E-05 39.4 4.1 27 3-30 2-28 (482)
405 1gy8_A UDP-galactose 4-epimera 78.8 2.4 8.2E-05 36.6 5.0 29 4-33 3-33 (397)
406 1z45_A GAL10 bifunctional prot 78.8 2 7E-05 40.5 4.9 30 3-33 11-41 (699)
407 4dqv_A Probable peptide synthe 78.7 1.9 6.6E-05 38.7 4.5 31 3-33 73-106 (478)
408 3don_A Shikimate dehydrogenase 78.6 0.96 3.3E-05 38.0 2.3 23 4-26 118-140 (277)
409 1o6z_A MDH, malate dehydrogena 78.6 1.5 5E-05 37.2 3.5 24 4-27 1-25 (303)
410 2j6i_A Formate dehydrogenase; 78.6 1.8 6.1E-05 37.8 4.1 28 4-32 165-193 (364)
411 4g65_A TRK system potassium up 78.4 1.4 4.8E-05 39.7 3.5 30 3-33 3-32 (461)
412 1obb_A Maltase, alpha-glucosid 78.3 1.4 4.7E-05 40.1 3.3 25 1-25 1-27 (480)
413 2gv8_A Monooxygenase; FMO, FAD 78.2 2.6 8.9E-05 37.3 5.2 24 3-26 6-29 (447)
414 4a26_A Putative C-1-tetrahydro 78.2 3 0.0001 35.4 5.2 26 4-30 166-192 (300)
415 3ics_A Coenzyme A-disulfide re 78.1 2 6.7E-05 39.7 4.5 33 1-33 34-67 (588)
416 3two_A Mannitol dehydrogenase; 78.1 1.1 3.9E-05 38.3 2.7 81 4-106 178-258 (348)
417 3ktd_A Prephenate dehydrogenas 77.9 1.9 6.6E-05 37.2 4.0 28 3-31 8-35 (341)
418 1pgj_A 6PGDH, 6-PGDH, 6-phosph 77.6 1.8 6.2E-05 39.2 4.0 27 4-31 2-28 (478)
419 1udb_A Epimerase, UDP-galactos 77.6 2.4 8.2E-05 35.7 4.6 28 5-33 2-30 (338)
420 2wtb_A MFP2, fatty acid multif 77.3 2.2 7.5E-05 40.8 4.6 29 3-32 312-340 (725)
421 3c96_A Flavin-containing monoo 77.3 2.3 7.8E-05 37.1 4.5 30 3-33 4-34 (410)
422 2p4h_X Vestitone reductase; NA 77.3 2.5 8.7E-05 35.2 4.6 29 4-33 2-31 (322)
423 4fcc_A Glutamate dehydrogenase 77.1 11 0.00038 33.8 8.8 92 4-112 236-347 (450)
424 3ouz_A Biotin carboxylase; str 77.0 2 6.9E-05 38.1 4.1 35 1-36 4-38 (446)
425 3hyw_A Sulfide-quinone reducta 76.9 2.7 9.2E-05 37.1 4.8 32 1-33 1-33 (430)
426 2c29_D Dihydroflavonol 4-reduc 76.8 2 6.7E-05 36.3 3.8 30 3-33 5-35 (337)
427 3l9w_A Glutathione-regulated p 76.8 2.1 7.1E-05 38.0 4.1 30 4-34 5-34 (413)
428 3l6e_A Oxidoreductase, short-c 76.8 3 0.0001 33.5 4.7 31 1-32 1-32 (235)
429 1rp0_A ARA6, thiazole biosynth 76.6 2.1 7.3E-05 35.5 3.9 31 3-33 39-69 (284)
430 2p4q_A 6-phosphogluconate dehy 76.6 2.1 7E-05 39.0 4.0 28 3-31 10-37 (497)
431 2ggs_A 273AA long hypothetical 76.5 2.3 7.9E-05 34.5 4.0 27 5-33 2-29 (273)
432 3oz2_A Digeranylgeranylglycero 76.3 1.8 6.1E-05 36.9 3.4 32 1-33 2-33 (397)
433 3lov_A Protoporphyrinogen oxid 76.2 2.3 7.9E-05 37.8 4.2 33 1-33 2-35 (475)
434 1zej_A HBD-9, 3-hydroxyacyl-CO 76.1 2.6 9E-05 35.5 4.3 27 4-32 13-39 (293)
435 3qj4_A Renalase; FAD/NAD(P)-bi 76.0 2.8 9.5E-05 35.5 4.5 29 4-32 2-32 (342)
436 3l07_A Bifunctional protein fo 75.9 4.2 0.00014 34.2 5.4 26 4-30 162-188 (285)
437 2xxj_A L-LDH, L-lactate dehydr 75.7 3 0.0001 35.4 4.7 23 4-26 1-23 (310)
438 2zbw_A Thioredoxin reductase; 75.7 2.7 9.1E-05 35.2 4.3 29 3-32 5-33 (335)
439 3cgv_A Geranylgeranyl reductas 75.7 1.9 6.5E-05 37.1 3.4 32 1-33 2-33 (397)
440 1cyd_A Carbonyl reductase; sho 75.5 3.7 0.00013 32.7 5.0 30 3-33 7-37 (244)
441 3f8d_A Thioredoxin reductase ( 75.4 2.8 9.5E-05 34.7 4.3 29 3-32 15-43 (323)
442 1ygy_A PGDH, D-3-phosphoglycer 75.3 3.1 0.00011 38.1 4.9 28 4-32 143-170 (529)
443 1hye_A L-lactate/malate dehydr 75.1 3.5 0.00012 35.0 4.9 24 4-27 1-25 (313)
444 3d3w_A L-xylulose reductase; u 75.1 3.9 0.00013 32.6 5.0 29 4-33 8-37 (244)
445 3ihm_A Styrene monooxygenase A 75.0 2.4 8E-05 37.5 3.9 29 4-33 23-51 (430)
446 3rp8_A Flavoprotein monooxygen 74.8 3.2 0.00011 36.0 4.7 29 3-32 23-51 (407)
447 1u8x_X Maltose-6'-phosphate gl 74.8 2.9 9.8E-05 37.8 4.4 32 3-34 28-61 (472)
448 1ooe_A Dihydropteridine reduct 74.8 3.3 0.00011 33.1 4.5 32 1-33 1-33 (236)
449 2i99_A MU-crystallin homolog; 74.4 2.9 9.8E-05 35.5 4.1 34 3-36 135-168 (312)
450 4a7p_A UDP-glucose dehydrogena 74.3 3.3 0.00011 37.1 4.7 30 3-33 8-37 (446)
451 1trb_A Thioredoxin reductase; 73.9 1.7 5.7E-05 36.2 2.5 28 2-30 4-31 (320)
452 1gtm_A Glutamate dehydrogenase 73.7 3.4 0.00012 36.7 4.6 29 4-33 213-242 (419)
453 3lzw_A Ferredoxin--NADP reduct 73.6 2.4 8.1E-05 35.3 3.4 30 3-33 7-36 (332)
454 3nks_A Protoporphyrinogen oxid 73.5 3.4 0.00012 36.5 4.7 24 3-26 2-25 (477)
455 3k5i_A Phosphoribosyl-aminoimi 73.3 3.3 0.00011 36.4 4.4 32 2-34 23-54 (403)
456 1vdc_A NTR, NADPH dependent th 72.9 2.3 7.8E-05 35.6 3.2 27 4-31 9-35 (333)
457 2bc0_A NADH oxidase; flavoprot 72.5 2.9 9.8E-05 37.6 3.9 30 3-32 35-66 (490)
458 3itj_A Thioredoxin reductase 1 72.2 3.1 0.00011 34.6 3.9 30 3-33 22-51 (338)
459 3sx6_A Sulfide-quinone reducta 72.1 2.9 9.9E-05 36.9 3.8 33 1-33 1-36 (437)
460 3h28_A Sulfide-quinone reducta 71.9 3.5 0.00012 36.3 4.3 31 3-33 2-33 (430)
461 2xve_A Flavin-containing monoo 71.9 14 0.00047 32.9 8.3 28 4-32 198-225 (464)
462 3i3l_A Alkylhalidase CMLS; fla 71.8 4.3 0.00015 37.7 5.0 32 1-33 21-52 (591)
463 3orq_A N5-carboxyaminoimidazol 71.8 4.6 0.00016 35.0 5.0 30 3-33 12-41 (377)
464 3ab1_A Ferredoxin--NADP reduct 71.5 4 0.00014 34.6 4.5 29 3-32 14-42 (360)
465 1bgv_A Glutamate dehydrogenase 71.2 21 0.0007 32.0 9.0 93 3-112 230-343 (449)
466 3oc4_A Oxidoreductase, pyridin 71.1 3.5 0.00012 36.6 4.1 32 1-33 1-33 (452)
467 4hv4_A UDP-N-acetylmuramate--L 71.1 5.5 0.00019 36.1 5.4 83 4-107 23-106 (494)
468 1sny_A Sniffer CG10964-PA; alp 71.0 4.4 0.00015 32.8 4.5 32 2-33 20-54 (267)
469 1wdk_A Fatty oxidation complex 71.0 2.9 9.8E-05 39.9 3.7 29 3-32 314-342 (715)
470 1h5q_A NADP-dependent mannitol 70.8 5.1 0.00018 32.2 4.8 30 3-33 14-44 (265)
471 1lqt_A FPRA; NADP+ derivative, 70.5 2.8 9.5E-05 37.5 3.3 24 1-24 1-24 (456)
472 3ajr_A NDP-sugar epimerase; L- 69.9 2.3 8E-05 35.3 2.5 29 5-33 1-31 (317)
473 2wsb_A Galactitol dehydrogenas 69.7 6.4 0.00022 31.4 5.1 29 4-33 12-41 (254)
474 1fmc_A 7 alpha-hydroxysteroid 69.7 4.4 0.00015 32.4 4.1 30 3-33 11-41 (255)
475 1uay_A Type II 3-hydroxyacyl-C 69.5 4.8 0.00016 31.9 4.3 29 4-33 3-32 (242)
476 3d64_A Adenosylhomocysteinase; 69.4 5.1 0.00017 36.4 4.8 28 4-32 278-305 (494)
477 2pd6_A Estradiol 17-beta-dehyd 69.1 6.2 0.00021 31.7 5.0 30 3-33 7-37 (264)
478 2xve_A Flavin-containing monoo 69.1 4.6 0.00016 36.1 4.4 23 1-24 1-23 (464)
479 1y56_B Sarcosine oxidase; dehy 69.0 4.3 0.00015 34.7 4.1 29 3-32 5-33 (382)
480 3h9u_A Adenosylhomocysteinase; 69.0 4.8 0.00016 36.0 4.4 28 4-32 212-239 (436)
481 3awd_A GOX2181, putative polyo 68.9 6.3 0.00022 31.6 5.0 29 4-33 14-43 (260)
482 1omo_A Alanine dehydrogenase; 68.8 4.6 0.00016 34.4 4.2 34 4-37 126-159 (322)
483 1c0p_A D-amino acid oxidase; a 68.6 6.1 0.00021 33.5 5.0 30 3-33 6-35 (363)
484 3q2o_A Phosphoribosylaminoimid 68.6 6 0.0002 34.3 5.0 29 4-33 15-43 (389)
485 3c4a_A Probable tryptophan hyd 68.4 4.5 0.00015 34.8 4.1 30 4-33 1-31 (381)
486 3h8l_A NADH oxidase; membrane 68.4 4.4 0.00015 35.2 4.1 30 4-33 2-33 (409)
487 3gwf_A Cyclohexanone monooxyge 68.3 4.3 0.00015 37.2 4.1 30 4-33 9-38 (540)
488 7mdh_A Protein (malate dehydro 68.1 4.1 0.00014 35.7 3.7 26 3-28 32-58 (375)
489 2i6t_A Ubiquitin-conjugating e 68.1 4.9 0.00017 34.0 4.2 24 3-26 14-37 (303)
490 3nix_A Flavoprotein/dehydrogen 67.9 5 0.00017 34.8 4.3 29 4-33 6-34 (421)
491 5mdh_A Malate dehydrogenase; o 67.7 2.3 7.9E-05 36.6 2.0 24 3-26 3-27 (333)
492 3n58_A Adenosylhomocysteinase; 67.6 5.4 0.00018 35.9 4.4 28 4-32 248-275 (464)
493 2d5c_A AROE, shikimate 5-dehyd 67.5 5 0.00017 32.8 4.0 25 5-30 118-142 (263)
494 2o23_A HADH2 protein; HSD17B10 67.3 7.2 0.00024 31.4 5.0 30 3-33 12-42 (265)
495 2hk9_A Shikimate dehydrogenase 67.1 5.2 0.00018 33.1 4.1 26 4-30 130-155 (275)
496 2bgk_A Rhizome secoisolaricire 67.0 7.2 0.00025 31.6 4.9 30 3-33 16-46 (278)
497 1ja9_A 4HNR, 1,3,6,8-tetrahydr 66.9 5.4 0.00018 32.3 4.1 30 3-33 21-51 (274)
498 2aqj_A Tryptophan halogenase, 66.9 6.2 0.00021 35.8 4.9 31 3-33 5-37 (538)
499 3afn_B Carbonyl reductase; alp 66.7 5 0.00017 32.1 3.8 30 3-33 7-37 (258)
500 2a8x_A Dihydrolipoyl dehydroge 66.6 4.7 0.00016 35.8 4.0 31 1-32 1-31 (464)
No 1
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=6.5e-56 Score=389.28 Aligned_cols=249 Identities=56% Similarity=0.888 Sum_probs=225.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeee----------eeccccccccccceeecCCeeEEECCEEEEEeecCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMF----------KYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 72 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~----------~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~ 72 (254)
|+||||+|+||+|++++|+|.+||+++++++..+ +||+.+|++. +.+....+ .+.++|+.+.++++.+
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLD-AEVSVNGN-NLVVNGKEIIVKAERD 78 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCSS
T ss_pred CeEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcC-ceEEEccC-cEEECCEEEEEEecCC
Confidence 3799999999999999999999999999988654 5688999987 66665444 7878888888876668
Q ss_pred CCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCC-CCeEEeeeCcccccC-CCCeEEcCChhhHhHHH
Q 025368 73 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 150 (254)
Q Consensus 73 ~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~-~~~~v~~vn~~~i~~-~~~iVa~p~C~~t~~~l 150 (254)
+++++|...++|+||+|+|++.+++.++.++++|+|++|||+..++ .|++|||+|+++|++ ..++|+||||++|++++
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap 158 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAP 158 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHH
Confidence 8889996558999999999999999999999999999999776444 689999999999984 37899999999999999
Q ss_pred HHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEceeCc
Q 025368 151 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 230 (254)
Q Consensus 151 ~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~~r 230 (254)
+|+||+++++|+++.++|+|++||+++..|++ +.+++++|++++|++|+.+||++|+.++||+++++++++|+|||++|
T Consensus 159 ~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~-~~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~ 237 (334)
T 3cmc_O 159 FAKVLHEQFGIVRGMMTTVHSYTNDQRILDLP-HKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPN 237 (334)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHhcCceeeeEEEEEeccchhhhcccc-ccccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCCC
Confidence 99999999999999999999999999999987 47899999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEecCCCCHHHHHHHhC
Q 025368 231 VSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 231 G~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
||+.++|++++++++.||++++|+
T Consensus 238 gs~~~l~~~l~k~~t~eei~~~lk 261 (334)
T 3cmc_O 238 VSVVDLVAELEKEVTVEEVNAALK 261 (334)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHH
T ss_pred EEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999874
No 2
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=4.7e-56 Score=385.59 Aligned_cols=253 Identities=87% Similarity=1.338 Sum_probs=235.5
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEe-----------eeeeecccccccccc-ceeecCCeeEEECCEEEEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAT-----------YMFKYDSVHGQWKHH-ELKVKDDKTLLFGEKPVTVF 68 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~-----------~~~~~~s~~g~~~~~-~v~~~~g~~l~~~~~~~~~~ 68 (254)
|.++||||+|+|++|+.++|++.++++++++++ ++++|||+||+|. + .+..+.++.+.++|+.+.++
T Consensus 1 m~~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~~v~~~~~~~l~i~Gk~I~v~ 79 (337)
T 3v1y_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWK-HSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCC-SSCEEEEETTEEEETTEEEEEE
T ss_pred CCceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCccc-CceEEEcCCcEEEECCEEEEEE
Confidence 778999999999999999999999999999885 4567999999998 6 77765543688999999999
Q ss_pred ecCCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCCCCeEEeeeCcccccCCCCeEEcCChhhHhH
Q 025368 69 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCL 148 (254)
Q Consensus 69 ~~~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~~~~~v~~vn~~~i~~~~~iVa~p~C~~t~~ 148 (254)
++.+|++++|...++|+||+||+.+.+++.++.++++|+|++|||++++|+|++|||+|++.++++.++|+||+|+++++
T Consensus 80 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~L 159 (337)
T 3v1y_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 159 (337)
T ss_dssp CCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred EecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhH
Confidence 88899999997679999999999999999999999999999999999888999999999999986678999999999999
Q ss_pred HHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEcee
Q 025368 149 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT 228 (254)
Q Consensus 149 ~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~ 228 (254)
+++|+||+++|||+++.++|+|++||+|+.+|++++++++++|++++|++|+.+|.++++.+++|+++++++.+|+|||+
T Consensus 160 ap~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 239 (337)
T 3v1y_O 160 APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPT 239 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEECSC
T ss_pred HHHHHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEEcCC
Confidence 99999999999999999999999999999999987789999999999999999999999999999999999999999999
Q ss_pred CceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 229 VDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 229 ~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
++||+.+++++|+++++.||++++|+
T Consensus 240 ~~~s~~dlt~~lek~~t~eei~~~lk 265 (337)
T 3v1y_O 240 VDVSVVDLTVRIEKAASYDAIKSAIK 265 (337)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CCcEEEEEEEEECCCCcHHHHHHHHH
Confidence 99999999999999999999999874
No 3
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=8.7e-56 Score=388.18 Aligned_cols=249 Identities=64% Similarity=1.012 Sum_probs=227.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeee----------eeccccccccccceeecCCeeEEECCEEEEEeecCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMF----------KYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 72 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~----------~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~ 72 (254)
|+||||+|+||+|++++|+|.+||+++++++..+ +||+.+|++. +.+....+ .+.++|+.+.+++..|
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFD-GTVEVKDG-HLIVNGKKIRVTAERD 78 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCSS
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCC-CeEEEcCC-EEEECCEEEEEEEcCC
Confidence 4799999999999999999999999999998664 4688899987 66654443 7888999999987778
Q ss_pred CCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCC-CCCeEEeeeCcccccCCCCeEEcCChhhHhHHHH
Q 025368 73 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKPELNIVSNASCTTNCLAPL 151 (254)
Q Consensus 73 ~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~-~~~~~v~~vn~~~i~~~~~iVa~p~C~~t~~~l~ 151 (254)
+++++|...++|+||+|+|++.+++.++.++++|+|++++|++.+ +.|++|||+|+++++ +.++|+||||++|+++++
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~ 157 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPL 157 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHH
Confidence 889999666899999999999999999999999999888899853 478999999999998 489999999999999999
Q ss_pred HHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEceeCce
Q 025368 152 AKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 231 (254)
Q Consensus 152 l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~~rG 231 (254)
|+||+++++|+++.++++|++||++..+|++..++++++|++++|++|+..||++|+.+++|+++++++++|+|||++||
T Consensus 158 lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g 237 (330)
T 1gad_O 158 AKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 237 (330)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCSSC
T ss_pred HHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEeccccE
Confidence 99999999999999999999999988889876567999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEecCCCCHHHHHHHhC
Q 025368 232 SVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 232 ~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
|+.++|++++++++.||++++|+
T Consensus 238 ~~~~l~~~l~k~~t~eei~~~~k 260 (330)
T 1gad_O 238 SVVDLTVRLEKAATYEQIKAAVK 260 (330)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999874
No 4
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=7.7e-56 Score=390.24 Aligned_cols=252 Identities=68% Similarity=1.071 Sum_probs=227.2
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeee-----------eeccccccccccceeecCCeeEEECCEEEEEee
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMF-----------KYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 69 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~-----------~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~ 69 (254)
|||+||||+|+|++|++++|+|.+||+++++++... +||+.+|++. +.+....+ .+.++|+.+.++.
T Consensus 1 mM~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~-~~~~~~~~-~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFH-GTVKAENG-KLVINGNPITIFQ 78 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEEC
T ss_pred CCceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCC-CceEEcCC-eEEECCeEEEEEe
Confidence 777899999999999999999999999999998763 4678888886 55554333 6888888888887
Q ss_pred cCCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCCCCeEEeeeCcccccCCCCeEEcCChhhHhHH
Q 025368 70 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLA 149 (254)
Q Consensus 70 ~~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~~~~~v~~vn~~~i~~~~~iVa~p~C~~t~~~ 149 (254)
..|+++++|...++|+||+|+|++.+++.++.++++|+|++++|+++++.|++|||+|++++++..++|+||||++|+++
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~ 158 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLA 158 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHH
Confidence 67888999965689999999999999999999999999988889997778999999999999844789999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEceeC
Q 025368 150 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 229 (254)
Q Consensus 150 l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~~ 229 (254)
++|+||+++|+|++..++++|++||+++.+|++...+++++|++++|++|+..||++|+.+++|+++++++++|+|||++
T Consensus 159 ~~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 238 (335)
T 1u8f_O 159 PLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTA 238 (335)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEESCS
T ss_pred HHHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEeccC
Confidence 99999999999999999999999999988898753588999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 230 DVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 230 rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
|||+.++|++++++++.|||+++|+
T Consensus 239 ~g~~~~l~~~l~~~~t~eei~~~~~ 263 (335)
T 1u8f_O 239 NVSVVDLTCRLEKPAKYDDIKKVVK 263 (335)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CEEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999874
No 5
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=1.7e-55 Score=381.45 Aligned_cols=250 Identities=66% Similarity=1.060 Sum_probs=234.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe-----------eeeeeccccccccccceeecCCeeEEECCEEEEEeecC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT-----------YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 71 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~-----------~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~ 71 (254)
|+||||+|+|++|+.++|++.++++++++++ ++++|||+||+|. +.+..+.+ .+.++|+.+.++++.
T Consensus 1 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~ 78 (332)
T 3pym_A 1 MVRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYA-GEVSHDDK-HIIVDGKKIATYQER 78 (332)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred CeEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEEeec
Confidence 3799999999999999999999999999885 4577999999998 88876555 899999999999888
Q ss_pred CCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCCCCeEEeeeCcccccCCCCeEEcCChhhHhHHHH
Q 025368 72 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLAPL 151 (254)
Q Consensus 72 ~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~~~~~v~~vn~~~i~~~~~iVa~p~C~~t~~~l~ 151 (254)
||++++|...++|+||+||+.+.+++.++.++++|+|++|||++++|.|++|||+|++.+++..++|+||+|++++++++
T Consensus 79 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~ 158 (332)
T 3pym_A 79 DPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPL 158 (332)
T ss_dssp SGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHH
T ss_pred ccccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHH
Confidence 99999997779999999999999999999999999999999999878899999999999986678999999999999999
Q ss_pred HHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEceeCce
Q 025368 152 AKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 231 (254)
Q Consensus 152 l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~~rG 231 (254)
++||+++|||+++.++|+|++||+|+.+|++++++++++|++++|++|+.+|.++++.+++|+++++++.+++|||+++|
T Consensus 159 lkvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~ 238 (332)
T 3pym_A 159 AKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDV 238 (332)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSC
T ss_pred HHHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCCCCc
Confidence 99999999999999999999999999999988789999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEecCCCCHHHHHHHhC
Q 025368 232 SVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 232 ~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
|+.+++++|+++++.||++++|+
T Consensus 239 s~~dlt~~lek~~t~eei~~~lk 261 (332)
T 3pym_A 239 SVVDLTVKLNKETTYDEIKKVVK 261 (332)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHH
T ss_pred EeeEEEEEECCcCCHHHHHHHHH
Confidence 99999999999999999999874
No 6
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.1e-55 Score=385.75 Aligned_cols=248 Identities=52% Similarity=0.872 Sum_probs=224.9
Q ss_pred cEEEEEccCHHHHHHHHHHHcC--CCceeEEeee----------eeeccccccccccceeecCCeeEEECCEEEEEeecC
Q 025368 4 VKIGINGFGRIGRLVARVILQR--DDVELVATYM----------FKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 71 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~--p~~~v~~~~~----------~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~ 71 (254)
+||||+|+||+|++++|+|.+| |+++++++.. ++||+.+|++. +.+....+ .+.++|+.+.++++.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~~ 78 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFP-GKVEYTEN-SLIVDGKEIKVFAEP 78 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcC-CcEEEcCC-EEEECCeEEEEEecC
Confidence 5999999999999999999999 9999998865 44688899987 67765443 788888888887666
Q ss_pred CCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCCCC-eEEeeeCcccccCCCCeEEcCChhhHhHHH
Q 025368 72 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNENEYKPELNIVSNASCTTNCLAP 150 (254)
Q Consensus 72 ~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~~~-~~v~~vn~~~i~~~~~iVa~p~C~~t~~~l 150 (254)
|+++++|...++|+||+|+|++.+++.++.++++|+|++|||+..++.| ++|||+|+++|+.++++|+||||++|++++
T Consensus 79 dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~lap 158 (332)
T 1hdg_O 79 DPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIAP 158 (332)
T ss_dssp SGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHHH
T ss_pred ChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHHH
Confidence 8888998544899999999999999999999999999999977765678 999999999998437899999999999999
Q ss_pred HHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEceeCc
Q 025368 151 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 230 (254)
Q Consensus 151 ~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~~r 230 (254)
+|+||+++++|+++.++++|++||+++..|+++ .+++++|++++|++|+.+||++|+.++||+++++++++|+|||++|
T Consensus 159 ~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~-~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~~ 237 (332)
T 1hdg_O 159 IVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPH-KDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPD 237 (332)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHhcCeeEeEEEEEEeccchhhhhcCcc-cccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEccccC
Confidence 999999999999999999999999999889874 6889999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEecCCCCHHHHHHHhC
Q 025368 231 VSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 231 G~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
||+.++|++++++++.|||+++|+
T Consensus 238 g~l~~l~~~l~k~~t~eei~~~lk 261 (332)
T 1hdg_O 238 GSITDLTVLVEKETTVEEVNAVMK 261 (332)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999874
No 7
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=4.2e-55 Score=379.30 Aligned_cols=250 Identities=49% Similarity=0.772 Sum_probs=233.9
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe----------eeeeeccccccccccceeecCCeeEEECCEEEEEeecCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT----------YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 72 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~----------~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~ 72 (254)
++||||+|+|++|+.++|++.++++++++++ ++++|||+||+|. +.+..+.+ .+.++|+.+.++++.+
T Consensus 4 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~d 81 (338)
T 3lvf_P 4 AVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFT-GEVEVVDG-GFRVNGKEVKSFSEPD 81 (338)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHCCTTTCCCS-SCEEEETT-EEEETTEEEEEECCSC
T ss_pred cEEEEEECCCcHHHHHHHHHHHCCCceEEEEecCCCHHHHHHHhccCCCCCCcC-CeEEEcCC-EEEECCEEEEEEEecc
Confidence 4799999999999999999999999999885 5688999999998 88887665 8999999999998889
Q ss_pred CCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCC-CCCeEEeeeCcccccCCCCeEEcCChhhHhHHHH
Q 025368 73 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKPELNIVSNASCTTNCLAPL 151 (254)
Q Consensus 73 ~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~-~~~~~v~~vn~~~i~~~~~iVa~p~C~~t~~~l~ 151 (254)
|++++|...++|+||+|++.+.+++.++.++++|+|++|||++++ ++|++|||+|++.+++..++|+||+|++++++++
T Consensus 82 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~Lap~ 161 (338)
T 3lvf_P 82 ASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPV 161 (338)
T ss_dssp GGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHHHH
T ss_pred cccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhHHH
Confidence 999999777999999999999999999999999999999998865 6899999999999986678999999999999999
Q ss_pred HHHHhhhcCeeEEEEEeeeeccccccccCCCCCC-CccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEceeCc
Q 025368 152 AKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSK-DWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 230 (254)
Q Consensus 152 l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~-~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~~r 230 (254)
|+||+++|||+++.++|+|++||+|+.+|+++.+ +++++|++++|++|+..|.++++.+++|+++++++.+|+|||+++
T Consensus 162 lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~ 241 (338)
T 3lvf_P 162 AKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 241 (338)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEEESCSS
T ss_pred HHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEEcCCCc
Confidence 9999999999999999999999999999988755 899999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEecC-CCCHHHHHHHhC
Q 025368 231 VSVVDLTVRLEK-DASYDEIKAAIK 254 (254)
Q Consensus 231 G~~~~~~~~~~~-~~~~~~v~~~~~ 254 (254)
||+.+++++|++ +++.||++++|+
T Consensus 242 ~s~~dlt~~lek~~~t~eei~~~lk 266 (338)
T 3lvf_P 242 GSLTELTVVLEKQDVTVEQVNEAMK 266 (338)
T ss_dssp CEEEEEEEEESSSSCCHHHHHHHHH
T ss_pred eEEEEEEEEEccCCCCHHHHHHHHH
Confidence 999999999999 999999999874
No 8
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=1.8e-54 Score=375.45 Aligned_cols=249 Identities=50% Similarity=0.836 Sum_probs=231.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC--CCceeEEe----------eeeeeccccccccccceeecCCeeEEECCEEEEEeec
Q 025368 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAT----------YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 70 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~--p~~~v~~~----------~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~ 70 (254)
++||||+|+|++|+.++|++.++ ++++++++ ++++|||+||+|. +.+..+.+ .+.++|+.+.++++
T Consensus 2 ~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e 79 (335)
T 3doc_A 2 AVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFP-KEVEVAGD-TIDVGYGPIKVHAV 79 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECS-SCCEECSS-EEESSSSEEEEECC
T ss_pred CEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCC-CeEEEecC-EEEECCEEEEEEee
Confidence 58999999999999999999987 68999884 5688999999998 88876554 89999999999988
Q ss_pred CCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCC-CCeEEeeeCcccccCCCCeEEcCChhhHhHH
Q 025368 71 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCLA 149 (254)
Q Consensus 71 ~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~-~~~~v~~vn~~~i~~~~~iVa~p~C~~t~~~ 149 (254)
.+|++++|...++|+||+||+.+.++++++.++++|+|++|||+++.| +|++|||+|++.+++..++|+||+|++++++
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~La 159 (335)
T 3doc_A 80 RNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCLA 159 (335)
T ss_dssp SSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhhhH
Confidence 899999997779999999999999999999999999999999988655 6999999999999866789999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEceeC
Q 025368 150 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 229 (254)
Q Consensus 150 l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~~ 229 (254)
++++||+++|||+++.++|+|++||+|+.+|++. ++++++|++++|++|+..|.++++.+++|+++++++.+|+|||++
T Consensus 160 p~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~-kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~ 238 (335)
T 3doc_A 160 PVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMH-KDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPTP 238 (335)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEESCS
T ss_pred HhHHHHHHHcCEEEEEEEeeeeccchhhhhcCcc-ccccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEeccc
Confidence 9999999999999999999999999999999874 789999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 230 DVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 230 rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+||+.+++++|+++++.||++++|+
T Consensus 239 ~~s~~dlt~~lek~~t~eei~~~lk 263 (335)
T 3doc_A 239 NVSVVDLTFIAKRETTVEEVNNAIR 263 (335)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cccceEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999874
No 9
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=1.6e-54 Score=376.19 Aligned_cols=249 Identities=50% Similarity=0.843 Sum_probs=221.5
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe----------eeeeeccccccccccceeecCCeeEEECCEEEEEeecCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT----------YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 72 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~----------~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~ 72 (254)
|+||||+|+|++|+.++|++.++++++++++ ++++|||+||+|. +.+..+.+ .+.++|+.+.++++.+
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~~d~~~~a~llkyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~d 81 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVAINASYPSETLAHLIKYDTVHGKFD-GTVEAFED-HLLVDGKMIRLLNNRD 81 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECSSCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCSC
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCCCCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEeecCC
Confidence 5799999999999999999999999999985 5788999999998 88876555 8999999999998889
Q ss_pred CCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCC-CCCeEEeeeCcccccC-CCCeEEcCChhhHhHHH
Q 025368 73 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 150 (254)
Q Consensus 73 ~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~-~~~~~v~~vn~~~i~~-~~~iVa~p~C~~t~~~l 150 (254)
|++++|...++|+||+|++.+.+++.++.++++|+|++|||++++ ++|++|||+|++.+++ ..++|+||+|+++++++
T Consensus 82 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~Lap 161 (345)
T 4dib_A 82 PKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLAP 161 (345)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred hhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhHH
Confidence 999999777999999999999999999999999999999998865 5899999999999985 57899999999999999
Q ss_pred HHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEceeCc
Q 025368 151 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 230 (254)
Q Consensus 151 ~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~~r 230 (254)
+|+||+++|||+++.++|+|++||+|+.+|+++ ++++++|++++|++|+.+|.++++.+++|+++++++.+|+|||+++
T Consensus 162 ~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~~ 240 (345)
T 4dib_A 162 VVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPN 240 (345)
T ss_dssp HHHHHHHHHCEEEEEEEEEECC--------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCSS
T ss_pred HHHHHHHhcCeEEEEEEeeeeccCCceeccccc-cccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCcc
Confidence 999999999999999999999999999999876 7899999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEecCCCCHHHHHHHhC
Q 025368 231 VSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 231 G~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
||+.+++++|+++++.||++++|+
T Consensus 241 ~s~~dlt~~lek~~t~eei~~~lk 264 (345)
T 4dib_A 241 VSLVDLVVDVKRDVTVEAINDAFK 264 (345)
T ss_dssp EEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999874
No 10
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=5.4e-54 Score=378.04 Aligned_cols=254 Identities=85% Similarity=1.297 Sum_probs=223.0
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeee-----------eeccccccccccceeecCCeeEEECCEEEEEee
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMF-----------KYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 69 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~-----------~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~ 69 (254)
|||+||||+|+|++|++++|+|.+||+++++++... +||+.+|+|..+.+....+..+.++|+.+.++.
T Consensus 1 mm~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEEC
T ss_pred CCceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEe
Confidence 667899999999999999999999999999998762 247778875301222102336778888888876
Q ss_pred cCCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCCCCeEEeeeCcccccCCCCeEEcCChhhHhHH
Q 025368 70 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLA 149 (254)
Q Consensus 70 ~~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~~~~~v~~vn~~~i~~~~~iVa~p~C~~t~~~ 149 (254)
..|+++++|...++|+||+|||++.+++.++.++++|+|++|||+..++.|++|||+|++++++..++|+||||++|+++
T Consensus 81 ~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~la 160 (337)
T 3e5r_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLA 160 (337)
T ss_dssp CSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHHH
Confidence 66888998865689999999999999999999999999989998876678899999999999844789999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEceeC
Q 025368 150 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 229 (254)
Q Consensus 150 l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~~ 229 (254)
++|+||+++|+|++..++++|++||++..+|++..++++.+|.+++|++|+..||++|+.+++|+++++++++|+|||++
T Consensus 161 ~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 240 (337)
T 3e5r_O 161 PLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTV 240 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEEeccC
Confidence 99999999999999999999999999888898754578888999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 230 DVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 230 rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
|||+.++|++++++++.|||+++|+
T Consensus 241 ~g~~~~l~~~l~k~~t~eei~~~~~ 265 (337)
T 3e5r_O 241 DVSVVDLTVRIEKAASYDAIKSAIK 265 (337)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CeEEEEEEEEECCCccHHHHHHHHH
Confidence 9999999999999999999999874
No 11
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=3.1e-54 Score=380.09 Aligned_cols=252 Identities=66% Similarity=1.023 Sum_probs=222.0
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeee-----------eeeccccccccccceeecCCeeEEECCEEEEEee
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYM-----------FKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 69 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~-----------~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~ 69 (254)
|+|+||||+|+||+|++++|+|.+||+++++++.. ++||+.+|+|. +.+....+ .+.++|+.+.+++
T Consensus 15 ~~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~-~~v~~~~~-~l~v~g~~i~v~~ 92 (354)
T 3cps_A 15 YFQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFN-GTVEVSGK-DLCINGKVVKVFQ 92 (354)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCS-SCEEECC--CEEETTEEEEEEC
T ss_pred CcceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCC-CcEEEeCC-EEEECCeEEEEEe
Confidence 34689999999999999999999999999999876 24678899987 66654433 6888888888887
Q ss_pred cCCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCC-CCeEEeeeCcccccCC-CCeEEcCChhhHh
Q 025368 70 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPE-LNIVSNASCTTNC 147 (254)
Q Consensus 70 ~~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~-~~~~v~~vn~~~i~~~-~~iVa~p~C~~t~ 147 (254)
..|+++++|...++|+||+|+|++.+++.++.++++|+|++|||+..++ .|++|||+|++++++. .++|+||||++|+
T Consensus 93 ~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~ 172 (354)
T 3cps_A 93 AKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNC 172 (354)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred cCChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHH
Confidence 6688889885468999999999999999999999999999999776444 6899999999999853 6899999999999
Q ss_pred HHHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCC--CCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEE
Q 025368 148 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSS--KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFR 225 (254)
Q Consensus 148 ~~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~--~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~ 225 (254)
++++|+||+++|+|+++.++++|++||++..+|++.. .+++.+|.+++|++|+..||++|+.+++|+++++++++|+|
T Consensus 173 lap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a~r 252 (354)
T 3cps_A 173 LAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIR 252 (354)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEEEE
T ss_pred HHHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEEEE
Confidence 9999999999999999999999999999888888741 45677888999999999999999999999999999999999
Q ss_pred ceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 226 VPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 226 vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
||++|||+.++|++++++++.|||+++|+
T Consensus 253 VP~~~gs~~dl~~~l~k~~t~eeI~~~~k 281 (354)
T 3cps_A 253 VPTPDVSVVDLTCKLAKPASIEEIYQAVK 281 (354)
T ss_dssp ESCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred eccCCEEEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999874
No 12
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=4.3e-54 Score=375.22 Aligned_cols=251 Identities=58% Similarity=0.964 Sum_probs=232.2
Q ss_pred CcEEEEEccCHHHHHHHHH----HHcCCCceeEEe-----------eeeeeccccccccccceeec-------CCeeEEE
Q 025368 3 KVKIGINGFGRIGRLVARV----ILQRDDVELVAT-----------YMFKYDSVHGQWKHHELKVK-------DDKTLLF 60 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~----L~~~p~~~v~~~-----------~~~~~~s~~g~~~~~~v~~~-------~g~~l~~ 60 (254)
++||||+|+|++|+.++|+ +.++++++++++ ++++|||+||+|. +.+... .++.+.+
T Consensus 2 ~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~-~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 2 PIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFK-YEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECS-SCEEEECSCTTSSSCCEEEE
T ss_pred ceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEe-eEEEecccccccCCCCEEEE
Confidence 5899999999999999999 677888999885 4578999999998 888761 3448999
Q ss_pred CCEEEEEee-cCCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCC-CCCeEEeeeCcccccC-CCCe
Q 025368 61 GEKPVTVFG-VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELNI 137 (254)
Q Consensus 61 ~~~~~~~~~-~~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~-~~~~~v~~vn~~~i~~-~~~i 137 (254)
+|+.+.+++ +.+|++++|...++|+||+||+.+.+++.++.++++|+|++|||++++ ++|++|||+|++.+++ ..++
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~I 160 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHV 160 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCSE
T ss_pred CCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCCE
Confidence 999999997 789999999767999999999999999999999999999999999865 7899999999999986 5789
Q ss_pred EEcCChhhHhHHHHHHHH-hhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCC
Q 025368 138 VSNASCTTNCLAPLAKVI-HDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALN 216 (254)
Q Consensus 138 Va~p~C~~t~~~l~l~pL-~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~ 216 (254)
|+||+|++++++++++|| +++|||+++.++|+|++||+|+.+|+++.++++++|++++|++|+.+|.++++.+++|+++
T Consensus 161 ISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~ 240 (359)
T 3ids_C 161 VSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQ 240 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSGGGT
T ss_pred EECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhchhhc
Confidence 999999999999999999 9999999999999999999999999987678999999999999999999999999999999
Q ss_pred CceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 217 GKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 217 ~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
++++.+|+|||+++||+.+++++|+++++.||++++|+
T Consensus 241 gkltg~avRVPv~~vs~~dlt~~lek~~t~eei~~~lk 278 (359)
T 3ids_C 241 GKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALK 278 (359)
T ss_dssp TSEEEEEEEESCSSCEEEEEEEECSSCCCHHHHHHHHH
T ss_pred CceEEEEEEcCCCCcEEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999874
No 13
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=1.3e-53 Score=371.47 Aligned_cols=249 Identities=64% Similarity=1.056 Sum_probs=233.0
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe-----------eeeeeccccccccccceeecCCeeEEECCEEEEEeecC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT-----------YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 71 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~-----------~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~ 71 (254)
|+||||+|+|++|+.++|.+.+++ ++++++ ++++|||+||+|. +.+..+.+ .+.++|+.+.++++.
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNG-QLVVDNHEISVYQCK 83 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred eeEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCC-CcEEEcCC-EEEECCEEEEEEecC
Confidence 589999999999999999999887 999885 4577899999998 88887655 899999999999878
Q ss_pred CCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCCCCeEEeeeCcccccC-CCCeEEcCChhhHhHHH
Q 025368 72 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 150 (254)
Q Consensus 72 ~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~~~~~v~~vn~~~i~~-~~~iVa~p~C~~t~~~l 150 (254)
+|++++|...++|+||+||+.+.++++++.++++|+|++|||++++|+|++|||+|++.+++ +.++|+||+|+++++++
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap 163 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAP 163 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHH
Confidence 89999997669999999999999999999999999999999999888999999999999985 57899999999999999
Q ss_pred HHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEceeCc
Q 025368 151 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 230 (254)
Q Consensus 151 ~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~~r 230 (254)
+++||+++|||+++.++|+|++||+|+..|++++++++++|++++|++|+.+|..+++.+++|+++++++.+|+|||+++
T Consensus 164 ~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv~~ 243 (346)
T 3h9e_O 164 LAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPD 243 (346)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEccccc
Confidence 99999999999999999999999999999998778999999999999999999899999999999999999999999999
Q ss_pred eeEEEEEEEecCCCCHHHHHHHhC
Q 025368 231 VSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 231 G~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
||+.+++++++++++.||++++|+
T Consensus 244 ~s~~dlt~~lek~~t~eei~~~lk 267 (346)
T 3h9e_O 244 VSVVDLTCRLAQPAPYSAIKEAVK 267 (346)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ceeEEEEEEECCcCCHHHHHHHHH
Confidence 999999999999999999999874
No 14
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=2.1e-53 Score=372.89 Aligned_cols=249 Identities=50% Similarity=0.832 Sum_probs=224.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC--CCceeEEee----------eeeecccccccccccee-ecCCeeEEECCEEEEEee
Q 025368 3 KVKIGINGFGRIGRLVARVILQR--DDVELVATY----------MFKYDSVHGQWKHHELK-VKDDKTLLFGEKPVTVFG 69 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~--p~~~v~~~~----------~~~~~s~~g~~~~~~v~-~~~g~~l~~~~~~~~~~~ 69 (254)
|+||||+|+|++|++++|+|.+| |+++++++. +++||+.+|++. +.+. ..++ .+.++|+.+.++.
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~-~~v~~~~~~-~l~v~g~~i~v~~ 78 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFD-ADVKTAGDS-AISVDGKVIKVVS 78 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCS-SCEEECTTS-EEEETTEEEEEEC
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCcc-ceeEEecCC-eEEECCeEEEEEe
Confidence 47999999999999999999999 999998874 455789999988 6665 3343 6778898888888
Q ss_pred cCCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCC-CCeEEeeeCcccccCCCCeEEcCChhhHhH
Q 025368 70 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCL 148 (254)
Q Consensus 70 ~~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~-~~~~v~~vn~~~i~~~~~iVa~p~C~~t~~ 148 (254)
..|+++++|...++|+||+|+|++.+++.++.++++|+|++++|++..+ .|++|||+|++++++..++|+||||++|++
T Consensus 79 ~~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~l 158 (337)
T 1rm4_O 79 DRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCL 158 (337)
T ss_dssp CSCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHH
T ss_pred cCChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHH
Confidence 7788889995348999999999999999999999999998888988444 689999999999984478999999999999
Q ss_pred HHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEcee
Q 025368 149 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT 228 (254)
Q Consensus 149 ~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~ 228 (254)
+++|+||+++|+|+++.++|+|++||+++..|.+ +.+++.+|++++|++|+..+..+.+.+++||++++++++|+|||+
T Consensus 159 ap~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~-~~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP~ 237 (337)
T 1rm4_O 159 APFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDAS-HRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPT 237 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCC-CSSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEESC
T ss_pred HHHHHHHHHhcCeeEEEEEEEEecCCccchhhcc-hhhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEecC
Confidence 9999999999999999999999999998888876 478898999999999999998888999999999999999999999
Q ss_pred CceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 229 VDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 229 ~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+|||+.+++++++++++.|||+++|+
T Consensus 238 ~~gs~~dl~~~l~k~~t~eei~~~lk 263 (337)
T 1rm4_O 238 PNVSVVDLVVQVSKKTFAEEVNAAFR 263 (337)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CCEEEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999874
No 15
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=3.4e-53 Score=369.52 Aligned_cols=249 Identities=45% Similarity=0.772 Sum_probs=229.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC---CCceeEEe----------eeeeeccccccccccceeecCCeeEEECCEEEEEee
Q 025368 3 KVKIGINGFGRIGRLVARVILQR---DDVELVAT----------YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 69 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~---p~~~v~~~----------~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~ 69 (254)
|+||||+|+|++|+.++|+|.++ |+|+++++ ++++|||.+|+|. +.+..+.+ .+.++|+.+.+++
T Consensus 1 ~ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~-~~v~~~~~-~l~v~g~~i~v~~ 78 (335)
T 1obf_O 1 TIRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFP-GTVSVNGS-YMVVNGDKIRVDA 78 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEEC
T ss_pred CcEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCC-CCEEEeCC-EEEECCEEEEEEE
Confidence 36999999999999999999999 89999876 4567899999998 77776544 8889999999987
Q ss_pred cCCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCC-CCC-eEEeeeCcccccCCCCeEEcCChhhHh
Q 025368 70 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAP-MFVVGVNENEYKPELNIVSNASCTTNC 147 (254)
Q Consensus 70 ~~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~-~~~-~~v~~vn~~~i~~~~~iVa~p~C~~t~ 147 (254)
+.||++++|...++|+||+|+|.+.+++.++.++++|+|++|||++++ |.| ++|||+|++.++...++|+||+|++++
T Consensus 79 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~ 158 (335)
T 1obf_O 79 NRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNC 158 (335)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHH
T ss_pred cCCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHH
Confidence 778999999666999999999999999999999999999999998865 688 999999999998546899999999999
Q ss_pred HHHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEce
Q 025368 148 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 227 (254)
Q Consensus 148 ~~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP 227 (254)
++++|+||+++|||+++.++|+|++||+++.+|++. .+++++|++++|++|+.+|.++++.+++|+++++++.+|+|||
T Consensus 159 Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVP 237 (335)
T 1obf_O 159 LAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYH-EDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVP 237 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEES
T ss_pred HHHHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccc-cccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEee
Confidence 999999999999999999999999999999999874 6889999999999999999999999999999999999999999
Q ss_pred eCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 228 TVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 228 ~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+++||+.+++++|+++++.||++++|+
T Consensus 238 v~~~s~~dl~v~lek~~t~eei~~~lk 264 (335)
T 1obf_O 238 TINVSIVDLSFVAKRNTTVEEVNGILK 264 (335)
T ss_dssp CSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999999874
No 16
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=2.3e-53 Score=374.06 Aligned_cols=249 Identities=39% Similarity=0.716 Sum_probs=214.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHc---CCCceeEEeeee----------eeccccccccccceeecCCeeEEECCEEEEEee
Q 025368 3 KVKIGINGFGRIGRLVARVILQ---RDDVELVATYMF----------KYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 69 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~---~p~~~v~~~~~~----------~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~ 69 (254)
|+||||+|+|++|++++|+|.+ ||+++++++..+ +||+.+|++. +.+....+ .+.++|+.+.++.
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~ 79 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFA-WEVRQERD-QLFVGDDAIRVLH 79 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEEC
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCC-ceEEEcCC-eeEECCEEEEEEe
Confidence 4899999999999999999999 999999988664 5688999987 66654433 7778888888876
Q ss_pred cCCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCC-CCCC-eEEeeeCcccccCCCCeEEcCChhhHh
Q 025368 70 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAP-MFVVGVNENEYKPELNIVSNASCTTNC 147 (254)
Q Consensus 70 ~~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~-~~~~-~~v~~vn~~~i~~~~~iVa~p~C~~t~ 147 (254)
..|+++++|...++|+||+|+|++.+++.++.++++|+|++|||+.. .+.| ++|||+|++.+++..++|+||||++|+
T Consensus 80 ~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCttn~ 159 (339)
T 2x5j_O 80 ERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNC 159 (339)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHH
T ss_pred cCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHHHH
Confidence 66788888853489999999999999999999999999988896664 4677 999999999998546899999999999
Q ss_pred HHHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEce
Q 025368 148 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 227 (254)
Q Consensus 148 ~~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP 227 (254)
++++|+||+++|+|++..++++|++||+++..|+++ .+++++|.+++|++|+.+|+++|+.+++|+++++++++|+|||
T Consensus 160 lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~-~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP 238 (339)
T 2x5j_O 160 IIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYH-PDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVP 238 (339)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEECCC------------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEEECS
T ss_pred HHHHHHHHHHccCcceeeEEEEEecccccccccccc-ccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEEEec
Confidence 999999999999999999999999999988888764 6788999999999999999999999999999999999999999
Q ss_pred eCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 228 TVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 228 ~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
++|||+.++|++++++++.|||+++|+
T Consensus 239 ~~~g~~~~l~v~l~k~~t~eei~~~lk 265 (339)
T 2x5j_O 239 TINVTAIDLSVTVKKPVKANEVNLLLQ 265 (339)
T ss_dssp SCSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ccCcEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999999874
No 17
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=4.9e-53 Score=370.01 Aligned_cols=247 Identities=52% Similarity=0.831 Sum_probs=224.4
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEe----------eeeeeccccccccccceeecCCeeEEECCEEEEEeecCCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVAT----------YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNP 73 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~----------~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~ 73 (254)
+||||+|+|++|++++|+|.+| +|+++++ ++++||+.+|+|. +.+.... +.+.++|+.+.++...++
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~~~~~~~a~ll~~ds~~G~~~-~~v~~~~-~~l~v~g~~i~v~~~~dp 77 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDLTDNKTLAHLLKYDSIYHRFP-GEVAYDD-QYLYVDGKAIRATAVKDP 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSCHHHHHHHHHCCTTTCSCS-SCEEECS-SEEEETTEEEEEECCSSG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhHhhhccccCCCCC-ceEEEcC-CEEEECCEEEEEEecCCh
Confidence 4999999999999999999999 8999875 4467889999988 7777543 378888988888866688
Q ss_pred CCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCC-CCeEEeeeCcccccC-CCCeEEcCChhhHhHHHH
Q 025368 74 EEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKP-ELNIVSNASCTTNCLAPL 151 (254)
Q Consensus 74 ~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~-~~~~v~~vn~~~i~~-~~~iVa~p~C~~t~~~l~ 151 (254)
++++|...++|+||+|+|++.+++.++.++++|+|++|||+.+++ .|++|||+|++.++. ..++|+||||++++++++
T Consensus 78 ~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap~ 157 (331)
T 2g82_O 78 KEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPV 157 (331)
T ss_dssp GGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHHH
T ss_pred hhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHHH
Confidence 889996558999999999999999999999999999999888555 689999999999985 368999999999999999
Q ss_pred HHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEceeCce
Q 025368 152 AKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 231 (254)
Q Consensus 152 l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~~rG 231 (254)
|+||+++|+|+++.++|+|++||+++..|++ +.+++++|++++|++|+..|+.+++.+++|+++++++++|+|||+++|
T Consensus 158 lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~-~~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~g 236 (331)
T 2g82_O 158 MKVLEEAFGVEKALMTTVHSYTNDQRLLDLP-HKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATG 236 (331)
T ss_dssp HHHHHHHTCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSSC
T ss_pred HHHHHHhcCccEEEEEEEeecccccchhccc-cccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCCE
Confidence 9999999999999999999999999988976 478899999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEecCCCCHHHHHHHhC
Q 025368 232 SVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 232 ~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
|+.+++++++++++.||++++|+
T Consensus 237 s~~dl~v~l~k~~t~eei~~~lk 259 (331)
T 2g82_O 237 SISDITALLKREVTAEEVNAALK 259 (331)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999874
No 18
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=2.1e-53 Score=371.43 Aligned_cols=249 Identities=51% Similarity=0.888 Sum_probs=228.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe----------eeeeeccccccccccceeecCCeeEEECCEEEEEeecCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT----------YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 72 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~----------~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~ 72 (254)
++||||+|+|++|+.++|+|.++|+|+++++ ++++|||.+|+|. +.+.... +.+.++|+.+.++++.+
T Consensus 2 ~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~~~~~~~a~ll~yDs~hG~~~-~~v~~~~-~~l~v~Gk~i~v~~~~d 79 (342)
T 2ep7_A 2 AIKVGINGFGRIGRSFFRASWGREEIEIVAINDLTDAKHLAHLLKYDSVHGIFK-GSVEAKD-DSIVVDGKEIKVFAQKD 79 (342)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECSSCHHHHHHHHHEETTTEECS-SCEEECS-SEEEETTEEEEEECCSS
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHhhhhhcccccccCC-CcEEEcC-CEEEECCEEEEEEEcCC
Confidence 4799999999999999999999999999886 4456789999987 7777654 48899999999987778
Q ss_pred CCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCCCC-eEEeeeCcccccC-CCCeEEcCChhhHhHHH
Q 025368 73 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNENEYKP-ELNIVSNASCTTNCLAP 150 (254)
Q Consensus 73 ~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~~~-~~v~~vn~~~i~~-~~~iVa~p~C~~t~~~l 150 (254)
|++++|...++|+||+|+|.+.+++.++.++++|+|++|||+.+++.| ++|||+|++.++. ..++|+||+|+++++++
T Consensus 80 p~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~Lap 159 (342)
T 2ep7_A 80 PSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLAP 159 (342)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHHH
Confidence 889999655899999999999999999999999999899999887899 9999999999985 46899999999999999
Q ss_pred HHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEceeCc
Q 025368 151 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 230 (254)
Q Consensus 151 ~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP~~r 230 (254)
+|+||+++|||+++.++|+|++||+++..|++ +.+++++|++++|++|+.+|.++++.+++|+++++++.+|+|||+++
T Consensus 160 ~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p-~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~ 238 (342)
T 2ep7_A 160 CVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLP-HKDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPD 238 (342)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHHcCeeEEEEEEEeecccchhhhcCC-cchhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEecccc
Confidence 99999999999999999999999999999987 47889999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEecC-CCCHHHHHHHhC
Q 025368 231 VSVVDLTVRLEK-DASYDEIKAAIK 254 (254)
Q Consensus 231 G~~~~~~~~~~~-~~~~~~v~~~~~ 254 (254)
||+.+++++|++ +++.||++++|+
T Consensus 239 ~s~~dltv~lek~~~t~eei~~~lk 263 (342)
T 2ep7_A 239 GSLIDLTVVVNKAPSSVEEVNEKFR 263 (342)
T ss_dssp CEEEEEEEEESSCCSCHHHHHHHHH
T ss_pred eEEEEEEEEEcCCCCCHHHHHHHHH
Confidence 999999999999 999999999874
No 19
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=3e-53 Score=370.36 Aligned_cols=252 Identities=64% Similarity=1.006 Sum_probs=229.3
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEee-----------eeeeccccccccccceeecCCeeEEECCEEEEEee
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATY-----------MFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 69 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~-----------~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~ 69 (254)
|..+||||+|+|++|+.++|++.+||+++++++. +++|||.+|+|. +.+..+.+ .+.++|+.+.+++
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~-~~v~~~~~-~l~v~Gk~i~v~~ 86 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFP-CEVTHADG-FLLIGEKKVSVFA 86 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEESSCEEEEEC
T ss_pred hhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCC-CCEEEcCC-EEEECCEEEEEEE
Confidence 6678999999999999999999999999999864 355789999998 77776544 7889999999987
Q ss_pred cCCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCC-CCeEEeeeCcccccCCCCeEEcCChhhHhH
Q 025368 70 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCL 148 (254)
Q Consensus 70 ~~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~-~~~~v~~vn~~~i~~~~~iVa~p~C~~t~~ 148 (254)
+.+|++++|...++|+||+|+|.+.+++.++.++++|+|++|||+++++ +|++|||+|++.++...++|+||+|+++++
T Consensus 87 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~L 166 (345)
T 2b4r_O 87 EKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCL 166 (345)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred cCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHH
Confidence 6788899996558999999999999999999999999999999888654 799999999999985468999999999999
Q ss_pred HHHHHHHhhhcCeeEEEEEeeeeccccccccCCCC--CCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEc
Q 025368 149 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS--SKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 226 (254)
Q Consensus 149 ~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~--~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~v 226 (254)
+++|+||+++|||+++.++|+|++||+++.+|+++ +.+++++|++++|++|+.+|.++++.+++|+++++++.+|+||
T Consensus 167 ap~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRV 246 (345)
T 2b4r_O 167 APLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRV 246 (345)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEEC
T ss_pred HHHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEEe
Confidence 99999999999999999999999999999999875 2678999999999999999999999999999999999999999
Q ss_pred eeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 227 PTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 227 P~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
|+++||+.+++++|+++++.||++++|+
T Consensus 247 Pv~~gs~~dltv~lek~~t~eei~~~lk 274 (345)
T 2b4r_O 247 PIGTVSVVDLVCRLQKPAKYEEVALEIK 274 (345)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999999874
No 20
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=6.3e-53 Score=373.88 Aligned_cols=249 Identities=47% Similarity=0.827 Sum_probs=225.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC--CCceeEEee----------eeeeccccccccccceeecCCeeEEECCEEEEEeec
Q 025368 3 KVKIGINGFGRIGRLVARVILQR--DDVELVATY----------MFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 70 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~--p~~~v~~~~----------~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~ 70 (254)
|+||||+|+|++|++++|+|.+| |+++++++. +++||+.+|++. +.+....+ .+.++|+.+.++..
T Consensus 2 ~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~ 79 (380)
T 2d2i_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIVCD 79 (380)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEECC
T ss_pred CcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCC-CcEEEeCC-eEEECCeEEEEEec
Confidence 48999999999999999999999 999998874 456789999988 77765444 68788888888877
Q ss_pred CCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCC-CC-eEEeeeCcccccC-CCCeEEcCChhhHh
Q 025368 71 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNENEYKP-ELNIVSNASCTTNC 147 (254)
Q Consensus 71 ~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~-~~-~~v~~vn~~~i~~-~~~iVa~p~C~~t~ 147 (254)
.|+++++|...++|+||+|+|++.+++.++.++++|+|+||||+..++ .| ++|||+|++.|++ ..++|+||||++|+
T Consensus 80 ~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn~ 159 (380)
T 2d2i_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNC 159 (380)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHHHH
Confidence 788899995458999999999999999999999999999999777544 67 9999999999985 36899999999999
Q ss_pred HHHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEce
Q 025368 148 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 227 (254)
Q Consensus 148 ~~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP 227 (254)
++++|+||+++|+|+++.++|+|++||+++.+|+++ .+++.+|.+++|++|+.+++.+.+.+++|+++++++++++|||
T Consensus 160 lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~-~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avRVP 238 (380)
T 2d2i_A 160 LAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVP 238 (380)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHhcCeeEEEEEEEeeccccchhhccch-hhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEEec
Confidence 999999999999999999999999999998899875 6889999999999999999999999999999999999999999
Q ss_pred eCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 228 TVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 228 ~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+++||+.+++++++++++.|||+++|+
T Consensus 239 t~~gs~~dlt~~l~k~~t~eeI~~~lk 265 (380)
T 2d2i_A 239 TPNVSVVDLVVQVEKPTITEQVNEVLQ 265 (380)
T ss_dssp CSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cCCEEEEEEEEEECCcCCHHHHHHHHH
Confidence 999999999999999999999999874
No 21
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=1.4e-52 Score=368.88 Aligned_cols=249 Identities=47% Similarity=0.827 Sum_probs=225.5
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC--CCceeEEee----------eeeeccccccccccceeecCCeeEEECCEEEEEeec
Q 025368 3 KVKIGINGFGRIGRLVARVILQR--DDVELVATY----------MFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 70 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~--p~~~v~~~~----------~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~ 70 (254)
|+||||+|+|++|++++|+|.+| |+++++++. +++||+.+|++. +.+....+ .+.++|+.+.++..
T Consensus 2 ~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~ 79 (339)
T 3b1j_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIVCD 79 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEECC
T ss_pred ceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCC-CcEEEcCC-eeeecCceEEEEec
Confidence 48999999999999999999999 999998874 345789999988 77765444 68888888888877
Q ss_pred CCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCC-CC-eEEeeeCcccccC-CCCeEEcCChhhHh
Q 025368 71 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNENEYKP-ELNIVSNASCTTNC 147 (254)
Q Consensus 71 ~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~-~~-~~v~~vn~~~i~~-~~~iVa~p~C~~t~ 147 (254)
.|+++++|...++|+||+|+|++.+++.++.++++|++++|||+..++ .| ++|||+|++.+++ ..++|+||||++|+
T Consensus 80 ~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtTn~ 159 (339)
T 3b1j_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTNC 159 (339)
T ss_dssp SCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchhhH
Confidence 788899996458999999999999999999999999998899777544 67 9999999999985 36899999999999
Q ss_pred HHHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEce
Q 025368 148 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 227 (254)
Q Consensus 148 ~~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~vP 227 (254)
++++|+||+++|+|+++.++++|++||+++.+|+++ .+++.+|..++|++|+.+++.+.+.+++|+++++++++|+|||
T Consensus 160 lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~-~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~rVP 238 (339)
T 3b1j_A 160 LAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVP 238 (339)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccch-hhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEEec
Confidence 999999999999999999999999999988889875 6889999999999999999999999999999999999999999
Q ss_pred eCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 228 TVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 228 ~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+++||+.+++++++++++.|||+++|+
T Consensus 239 ~~~g~~~dl~v~l~k~~t~eeI~~~lk 265 (339)
T 3b1j_A 239 TPNVSVVDLVVQVEKPTITEQVNEVLQ 265 (339)
T ss_dssp CSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cCCEEEEEEEEEEcCcCCHHHHHHHHH
Confidence 999999999999999999999999874
No 22
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=3.2e-53 Score=369.35 Aligned_cols=248 Identities=48% Similarity=0.846 Sum_probs=229.4
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEee----------eeeeccccccccccceeecCCeeEEECCEEEEEeecCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATY----------MFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 72 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~----------~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~ 72 (254)
++||||+|+|++|+.++|+|.++ +|+++++. +++|||++|+|. +.+....+ .+.++|+.+.++++.|
T Consensus 21 ~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl~d~~~~a~llkydS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~~~d 97 (356)
T 3hja_A 21 SMKLAINGFGRIGRNVFKIAFER-GIDIVAINDLTDPKTLAHLLKYDSTFGVYN-KKVESRDG-AIVVDGREIKIIAERD 97 (356)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCSS
T ss_pred CeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCHHHhhhhhccccCCCCCC-CCEEEcCC-EEEECCEEEEEEEcCC
Confidence 47999999999999999999998 79988753 778899999998 77775544 8999999999998778
Q ss_pred CCCCCcccCCCcEEEEecCCccC----HHHHHHHHH-CCCCeEEecCCCCC-CCeEEeeeCcccccCCCCeEEcCChhhH
Q 025368 73 PEEIPWAETGAEYVVESTGVFTD----KDKAAAHLK-GGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTN 146 (254)
Q Consensus 73 ~~~~~~~~~~~Dvv~~a~~~~~s----~~~~~~~~~-~G~~~~viS~~~~~-~~~~v~~vn~~~i~~~~~iVa~p~C~~t 146 (254)
|++++|...++|+||+||+.+.+ ++.++.+++ +|+|++|||+++.| +|++|||+|++.+++..++|+||+|+++
T Consensus 98 p~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCTTn 177 (356)
T 3hja_A 98 PKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTN 177 (356)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHHHH
T ss_pred hhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccchh
Confidence 99999977799999999999999 999999999 99999999888554 6999999999999866789999999999
Q ss_pred hHHHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccCCCceeEEEEEc
Q 025368 147 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 226 (254)
Q Consensus 147 ~~~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~~~~v~~~~~~v 226 (254)
+++++|+||+++|||+++.++|+|++||+|+.+|+++ ++++++|.+++|++|+.+|.++++.+++|+++++++.+|+||
T Consensus 178 ~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRV 256 (356)
T 3hja_A 178 CLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRV 256 (356)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEEEEE
T ss_pred hhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcc-cccccccccccEEEcCCCchHHHHHHhccccCCcEEEEEEEc
Confidence 9999999999999999999999999999999999876 799999999999999999999999999999999999999999
Q ss_pred eeCceeEEEEEEEe-cCCCCHHHHHHHhC
Q 025368 227 PTVDVSVVDLTVRL-EKDASYDEIKAAIK 254 (254)
Q Consensus 227 P~~rG~~~~~~~~~-~~~~~~~~v~~~~~ 254 (254)
|+++||+.+++++| +++++.||++++|+
T Consensus 257 Pv~~~s~~dlt~~l~ek~~t~eeI~~~lk 285 (356)
T 3hja_A 257 PVPTGSIVDLTVQLKKKDVTKEEINSVLR 285 (356)
T ss_dssp SCSSCEEEEEEEEESCTTCCHHHHHHHHH
T ss_pred CCCccEeEEEEEEEccCCCCHHHHHHHHH
Confidence 99999999999999 99999999999874
No 23
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=6e-45 Score=321.37 Aligned_cols=234 Identities=21% Similarity=0.236 Sum_probs=178.2
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcC--CCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCC
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQR--DDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIP 77 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~--p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~ 77 (254)
|+|+||+|+|+ |++|++++|+|.+| |+++++.+.+.+ . .|+.+.+++..+.+.. .+++ +
T Consensus 1 ~~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~---~------------~G~~~~~~~~~i~~~~-~~~~--~ 62 (336)
T 2r00_A 1 SQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER---S------------EGKTYRFNGKTVRVQN-VEEF--D 62 (336)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT---T------------TTCEEEETTEEEEEEE-GGGC--C
T ss_pred CCccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC---C------------CCCceeecCceeEEec-CChH--H
Confidence 45789999998 99999999999999 889988886532 1 2223445565555532 3333 4
Q ss_pred cccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC---CCCCCeEEeeeCcccccC--CCCeEEcCChhhHhHHHHH
Q 025368 78 WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKP--ELNIVSNASCTTNCLAPLA 152 (254)
Q Consensus 78 ~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~---~~~~~~~v~~vn~~~i~~--~~~iVa~p~C~~t~~~l~l 152 (254)
| .++|+||+|+|++.++++++.++++|++++++|++ +++.|.++||+|++.|++ .+++|+|||||+|+++++|
T Consensus 63 ~--~~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp~C~tt~~~~~l 140 (336)
T 2r00_A 63 W--SQVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANPNCSTIQMLVAL 140 (336)
T ss_dssp G--GGCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECCCHHHHHHHHHH
T ss_pred h--cCCCEEEECCCchHHHHHHHHHHHcCCEEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECCChHHHHHHHHH
Confidence 5 57999999999999999999999999954445776 346789999999999984 2679999999999999999
Q ss_pred HHHhhhcCeeEEEEEeeeecccccc-ccCCCCC-----------CCccccccccceeeccCC-----Chhhhhh------
Q 025368 153 KVIHDKFGIVEGLMTTVHSITATQK-TVDGPSS-----------KDWRGGRAASFNIIPSST-----GAAKAVG------ 209 (254)
Q Consensus 153 ~pL~~~~~i~~~~v~~~~~~sg~~~-~~d~~~~-----------~~~~~~~~~~~n~~p~~~-----~~~~e~~------ 209 (254)
+||+++++|++..++++|++||+++ ..+++.. .++++++.+++|++|+.. +|++|+.
T Consensus 141 ~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~Ee~k~~~e~ 220 (336)
T 2r00_A 141 KPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGYTKEEMKMVWET 220 (336)
T ss_dssp HHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCSSCBHHHHHHHHHH
T ss_pred HHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccCCccHHHHHHHHHH
Confidence 9999999999999999999999965 5555421 246777788999999974 7877743
Q ss_pred -hhcccCCCceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 210 -KVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 210 -~~l~~~~~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+++|+.+++++|+|+|||++|||+.++|++++++++.+|++++|+
T Consensus 221 ~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l~~~~t~~ei~~~~~ 266 (336)
T 2r00_A 221 QKIFNDPSIMVNPTCVRVPVFYGHAEAVHVETRAPIDAEQVMDMLE 266 (336)
T ss_dssp HHHTTCTTCEEEEEEEEESSCBSEEEEEEEEESSCCCHHHHHHHHH
T ss_pred HHHhCCCCCcEEEEeEEeccCcEEEEEEEEEeCCCCCHHHHHHHHH
Confidence 455666778999999999999999999999999999999999874
No 24
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=2.9e-44 Score=318.70 Aligned_cols=232 Identities=16% Similarity=0.206 Sum_probs=183.7
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcC--CCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 3 KVKIGINGF-GRIGRLVARVILQR--DDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~--p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
++||||+|+ ||+|++|+|+|.+| |.+++..+.+.+ +.|+.+.+++..+.+. +.+++.+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~---------------saG~~~~~~~~~~~~~-~~~~~~~--- 62 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASAR---------------SAGKSLKFKDQDITIE-ETTETAF--- 62 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTT---------------TTTCEEEETTEEEEEE-ECCTTTT---
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccc---------------cCCCcceecCCCceEe-eCCHHHh---
Confidence 589999999 99999999999998 767777665432 2333455666544442 2333333
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC---CCCCCeEEeeeCcccccCCCCeEEcCChhhHhHHHHHHHHh
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKPELNIVSNASCTTNCLAPLAKVIH 156 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~---~~~~~~~v~~vn~~~i~~~~~iVa~p~C~~t~~~l~l~pL~ 156 (254)
.++|+||+|+|++.++++++.++++|++++++|++ +++.|+++||+|++.|+...++|+|||||+|+++++|+||+
T Consensus 63 -~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpgC~tt~~~l~l~pL~ 141 (366)
T 3pwk_A 63 -EGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCSTIQMMVALEPVR 141 (366)
T ss_dssp -TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCCHHHHHHHHHHHHHH
T ss_pred -cCCCEEEECCChHhHHHHHHHHHHCCCEEEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCCcHHHHHHHHHHHHH
Confidence 58999999999999999999999999965556776 35678999999999998547899999999999999999999
Q ss_pred hhcCeeEEEEEeeeeccccccccCC-C---------------CCCCcccc-------ccccceeeccC-----CChhhhh
Q 025368 157 DKFGIVEGLMTTVHSITATQKTVDG-P---------------SSKDWRGG-------RAASFNIIPSS-----TGAAKAV 208 (254)
Q Consensus 157 ~~~~i~~~~v~~~~~~sg~~~~~d~-~---------------~~~~~~~~-------~~~~~n~~p~~-----~~~~~e~ 208 (254)
++++|++..++++|++||+++.... . ......++ .++++|++|++ +||++|+
T Consensus 142 ~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP~I~~~~~~g~t~EE 221 (366)
T 3pwk_A 142 QKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQIDVFTDNDYTYEE 221 (366)
T ss_dssp HHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBCCSSCBCTTSSBHHH
T ss_pred HhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhccccceecccccCCCcHHH
Confidence 9999999999999999998553210 0 00011223 67999999998 3788888
Q ss_pred hhhccc-------CCCceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 209 GKVLPA-------LNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 209 ~~~l~~-------~~~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+++..| ...+++|||+|||++|||++++|++++++++.+|++++|+
T Consensus 222 ~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~~~tv~v~l~~~~s~eei~~~l~ 274 (366)
T 3pwk_A 222 MKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEVAPIEEVKAAIA 274 (366)
T ss_dssp HHHHHHHHHHTTCTTSEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCeEEEEEEechhccEEEEEEEEECCCCCHHHHHHHHH
Confidence 765433 3457999999999999999999999999999999999874
No 25
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=4e-44 Score=315.64 Aligned_cols=231 Identities=19% Similarity=0.283 Sum_probs=181.8
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcC--CCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 4 VKIGINGF-GRIGRLVARVILQR--DDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~--p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
+||||+|+ ||+|++|+|+|.+| |.+++..+.+. +. .|+.+.+++..+.+. ..+++.+
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~---~~------------aG~~~~~~~~~~~~~-~~~~~~~---- 61 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA---RS------------QGRKLAFRGQEIEVE-DAETADP---- 61 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT---TT------------SSCEEEETTEEEEEE-ETTTSCC----
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc---cc------------CCCceeecCCceEEE-eCCHHHh----
Confidence 69999999 99999999999999 66666666543 22 333455666555443 2333333
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC---CCCCCeEEeeeCc-ccccCC-CCeEEcCChhhHhHHHHHHHH
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNE-NEYKPE-LNIVSNASCTTNCLAPLAKVI 155 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~---~~~~~~~v~~vn~-~~i~~~-~~iVa~p~C~~t~~~l~l~pL 155 (254)
.++|+||+|+|++.++++++.++++|+++++.|++ +++.|+++||+|+ +.|+.. .++|+|||||+|+++++|+||
T Consensus 62 ~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~tt~~~l~l~pL 141 (344)
T 3tz6_A 62 SGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKVL 141 (344)
T ss_dssp TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHHHHHHHHHHHHH
T ss_pred ccCCEEEECCChHHHHHHHHHHHhCCCEEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcHHHHHHHHHHHH
Confidence 68999999999999999999999999955545776 3567999999999 999752 489999999999999999999
Q ss_pred hhhcCeeEEEEEeeeeccccccccC--------------------CCCC---CCccccccccceeeccC-------CChh
Q 025368 156 HDKFGIVEGLMTTVHSITATQKTVD--------------------GPSS---KDWRGGRAASFNIIPSS-------TGAA 205 (254)
Q Consensus 156 ~~~~~i~~~~v~~~~~~sg~~~~~d--------------------~~~~---~~~~~~~~~~~n~~p~~-------~~~~ 205 (254)
+++++|++..++++|++||+++..- +... ....++.+.+||++||+ |.|+
T Consensus 142 ~~~~~i~~i~v~t~~~~SGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p~i~~~~~~ghrHt 221 (344)
T 3tz6_A 142 HDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGSLVDDGSGET 221 (344)
T ss_dssp HHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBCCCSCBCSSSSCCB
T ss_pred HHhCCCceEEEEeccCCCccChhhhHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccCCCcCC
Confidence 9999999999999999999855321 1100 12356778999999985 3568
Q ss_pred hhhhhhccc-------CCCceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 206 KAVGKVLPA-------LNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 206 ~e~~~~l~~-------~~~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+|++++..| -..+++|||+|||++|||++++|++++++++.+|++++|+
T Consensus 222 ~EE~k~~~e~~kilg~~~~~v~ft~vrvPv~rGh~~tv~v~l~~~~s~eei~~~l~ 277 (344)
T 3tz6_A 222 DEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLD 277 (344)
T ss_dssp HHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEEEEeceeceEEEEEEEEECCCCCHHHHHHHHh
Confidence 885544322 1246999999999999999999999999999999999884
No 26
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=9.7e-44 Score=312.92 Aligned_cols=228 Identities=22% Similarity=0.321 Sum_probs=187.2
Q ss_pred cEEEEEcc-CHHHHHHHHHHH--cCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 4 VKIGINGF-GRIGRLVARVIL--QRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~--~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
+||+|+|+ |++|++|+|+|. +||.+++..+.+.+ ..|+.+.++++.+.++.. +++ +|
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~---------------~~g~~l~~~g~~i~v~~~-~~~--~~-- 60 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPR---------------SAGVRLAFRGEEIPVEPL-PEG--PL-- 60 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGG---------------GSSCEEEETTEEEEEEEC-CSS--CC--
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccc---------------cCCCEEEEcCceEEEEeC-Chh--hc--
Confidence 48999998 999999999999 77877765443221 123356677766776543 443 46
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC---CCCCCeEEeeeCcccccCCCCeEEcCChhhHhHHHHHHHHhh
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKPELNIVSNASCTTNCLAPLAKVIHD 157 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~---~~~~~~~v~~vn~~~i~~~~~iVa~p~C~~t~~~l~l~pL~~ 157 (254)
++|+||+|+|++.++++++.++++|+++++.|++ +++.|+++||+|+++|++..++|+|||||+|+++++|+||++
T Consensus 61 -~~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt~~~~~l~pL~~ 139 (331)
T 2yv3_A 61 -PVDLVLASAGGGISRAKALVWAEGGALVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTAILAMALWPLHR 139 (331)
T ss_dssp -CCSEEEECSHHHHHHHHHHHHHHTTCEEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHHHHHHHHHHHHH
T ss_pred -CCCEEEECCCccchHHHHHHHHHCCCEEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999954445766 346789999999999985357999999999999999999999
Q ss_pred hcCeeEEEEEeeeecccc------------ccccCCCCCCCccccccccceeeccC-----CChhhh---h----hhhc-
Q 025368 158 KFGIVEGLMTTVHSITAT------------QKTVDGPSSKDWRGGRAASFNIIPSS-----TGAAKA---V----GKVL- 212 (254)
Q Consensus 158 ~~~i~~~~v~~~~~~sg~------------~~~~d~~~~~~~~~~~~~~~n~~p~~-----~~~~~e---~----~~~l- 212 (254)
+++|++..++++|++||+ +...+++...++++++++++|++|+. |+|++| + .+++
T Consensus 140 ~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~~i~~e~~kil~ 219 (331)
T 2yv3_A 140 AFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEMKVVWETHKIFG 219 (331)
T ss_dssp HHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHHHHHHHHHHHTT
T ss_pred hCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHHHHHHHHHHHhC
Confidence 999999999999999998 33355544457788889999999997 567777 5 4455
Q ss_pred -ccCCCceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 213 -PALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 213 -~~~~~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
|++ +++|+|+|||++|||+.++|++++++++.+|++++|+
T Consensus 220 ~~~l--~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~ 260 (331)
T 2yv3_A 220 DDTI--RISATAVRVPTLRAHAEAVSVEFARPVTPEAAREVLK 260 (331)
T ss_dssp CTTC--EEEEECCBCSCSSEEEEEEEEEESSCCCHHHHHHHHT
T ss_pred CCCc--eEEEEEEEeccCceEEEEEEEEECCCCCHHHHHHHHH
Confidence 554 5999999999999999999999999999999999985
No 27
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=8e-44 Score=314.68 Aligned_cols=232 Identities=13% Similarity=0.157 Sum_probs=187.6
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHH--cCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCc
Q 025368 2 GKVKIGINGF-GRIGRLVARVIL--QRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPW 78 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~--~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 78 (254)
|++||+|+|+ |++|++++|+|. +||.++++.+.+++ ..|+ .+.+++..+.+.. .+++. |
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~---~~g~------------~~~~~g~~i~~~~-~~~~~--~ 66 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE---SAGQ------------RMGFAESSLRVGD-VDSFD--F 66 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT---TTTC------------EEEETTEEEECEE-GGGCC--G
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC---CCCC------------ccccCCcceEEec-CCHHH--h
Confidence 3479999998 999999999999 88999998876542 1122 3335554444432 23333 5
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC-C-CCCCeEEeeeCcccccCCC---CeEEcCChhhHhHHHHHH
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-S-KDAPMFVVGVNENEYKPEL---NIVSNASCTTNCLAPLAK 153 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~-~-~~~~~~v~~vn~~~i~~~~---~iVa~p~C~~t~~~l~l~ 153 (254)
.++|+||+|+|++.++++++.++++|++++++|++ + ++.|..+||+|+++|++ + ++|+|||||+|+++++|+
T Consensus 67 --~~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~-~~~~~iIanp~C~tt~~~~~l~ 143 (340)
T 2hjs_A 67 --SSVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLAS-QAAPFLLSSPCAVAAELCEVLA 143 (340)
T ss_dssp --GGCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGG-SCSSCEEECCCHHHHHHHHHHH
T ss_pred --cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhc-CcCCCEEEcCCHHHHHHHHHHH
Confidence 57999999999999999999999999976556776 3 34688999999999985 4 799999999999999999
Q ss_pred HHhhhcCeeEEEEEeeeeccccccc-cCCCC-----------CCCccccccccceeeccCC-----Chhhhhh-------
Q 025368 154 VIHDKFGIVEGLMTTVHSITATQKT-VDGPS-----------SKDWRGGRAASFNIIPSST-----GAAKAVG------- 209 (254)
Q Consensus 154 pL~~~~~i~~~~v~~~~~~sg~~~~-~d~~~-----------~~~~~~~~~~~~n~~p~~~-----~~~~e~~------- 209 (254)
||+++++|++..++++|++||+++. .+.+. .....|++++++|++||.. +|++|++
T Consensus 144 pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~Ee~k~~~~~~ 223 (340)
T 2hjs_A 144 PLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSAIERRIFAEVQ 223 (340)
T ss_dssp HHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBHHHHHHHHHHH
T ss_pred HHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCccHHHHHHHHHHH
Confidence 9999999999999999999999753 44310 1234667778999999975 8888843
Q ss_pred hhcccCCCceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 210 KVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 210 ~~l~~~~~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+++|+.+++++|+|+|||++|||+.++|++++++++.||++++|+
T Consensus 224 kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~ 268 (340)
T 2hjs_A 224 ALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLD 268 (340)
T ss_dssp HHTGGGBCCEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred HHhCCCCCcEEEEeEEcCcCceEEEEEEEEECCCCCHHHHHHHHh
Confidence 456666778999999999999999999999999999999999874
No 28
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=1.6e-44 Score=320.53 Aligned_cols=235 Identities=17% Similarity=0.192 Sum_probs=182.7
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCC-eeEEECCEEEEEeecCCCCCCCccc
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDD-KTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g-~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
++||||+|+ ||+|++|+|+|.+||++++..+.+.+ ..|+.. .++..... ..+.-+.....+ ...+++++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~---saGk~~-~~~~p~~~~~~~~~~~~~~~v-~~~~~~~~---- 77 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKG---SVGKPY-GEVVRWQTVGQVPKEIADMEI-KPTDPKLM---- 77 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEEST---TTTSBH-HHHCCCCSSSCCCHHHHTCBC-EECCGGGC----
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECch---hcCCCh-hHhcccccccccccccccceE-EeCCHHHh----
Confidence 479999999 99999999999999999999987653 346543 21110000 000000001122 11233332
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC---CCCCCeEEeeeCcccccC--C--------CCeEEcCChhhHh
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKP--E--------LNIVSNASCTTNC 147 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~---~~~~~~~v~~vn~~~i~~--~--------~~iVa~p~C~~t~ 147 (254)
.++|+||+|+|++.++++++.++++|++++++|++ +++.|..+||+|+++++. . +++|+|||||+|+
T Consensus 78 ~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~iIanPgC~tt~ 157 (359)
T 4dpk_A 78 DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFIVTTPLCTAQG 157 (359)
T ss_dssp TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEEEECCCHHHHH
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccEEECCCcHHHH
Confidence 58999999999999999999999999976666777 356789999999999842 1 3699999999999
Q ss_pred HHHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCC----hhhhhhhhcccCCC------
Q 025368 148 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKVLPALNG------ 217 (254)
Q Consensus 148 ~~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~----~~~e~~~~l~~~~~------ 217 (254)
++++|+||+++++|+++.++++|++||+++. ... ..++++|++||..+ |.+|+.++++++.+
T Consensus 158 ~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~~l~g~~~~~~ 229 (359)
T 4dpk_A 158 AAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILSEVKRNVDEPK 229 (359)
T ss_dssp HHHHHHHHHHHSCEEEEEEEEEECSGGGCSS--CSB------GGGTTTCCEECCHHHHHHHHHHHHHHHHTSCCSCCCSC
T ss_pred HHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHhhccccccccc
Confidence 9999999999999999999999999998765 111 13689999999843 56788899987654
Q ss_pred ----ceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 218 ----KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 218 ----~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+++|+|+|||++|||++++|++++++++.+|++++|+
T Consensus 230 ~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~ 270 (359)
T 4dpk_A 230 LEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLE 270 (359)
T ss_dssp GGGCEEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHH
Confidence 7999999999999999999999999999999999874
No 29
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=1.6e-44 Score=320.53 Aligned_cols=235 Identities=17% Similarity=0.192 Sum_probs=182.6
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCC-eeEEECCEEEEEeecCCCCCCCccc
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDD-KTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g-~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
++||||+|+ ||+|++|+|+|.+||++++..+.+.+ ..|+.. .++..... ..+.-+.....+ ...+++++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~---saGk~~-~~~~p~~~~~~~~~~~~~~~v-~~~~~~~~---- 77 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKG---SVGKPY-GEVVRWQTVGQVPKEIADMEI-KPTDPKLM---- 77 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEEST---TTTSBH-HHHCCCCSSSCCCHHHHTCBC-EECCGGGC----
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECch---hcCCCh-hHhcccccccccccccccceE-EeCCHHHh----
Confidence 479999999 99999999999999999999987653 346543 21110000 000000001122 11233332
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC---CCCCCeEEeeeCcccccC--C--------CCeEEcCChhhHh
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKP--E--------LNIVSNASCTTNC 147 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~---~~~~~~~v~~vn~~~i~~--~--------~~iVa~p~C~~t~ 147 (254)
.++|+||+|+|++.++++++.++++|++++++|++ +++.|..+||+|+++++. . +++|+|||||+|+
T Consensus 78 ~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~iIanPgC~tt~ 157 (359)
T 4dpl_A 78 DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFIVTTPLCTAQG 157 (359)
T ss_dssp TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEEEECCCHHHHH
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccEEECCCcHHHH
Confidence 58999999999999999999999999976666777 356789999999999842 1 3699999999999
Q ss_pred HHHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCC----hhhhhhhhcccCCC------
Q 025368 148 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKVLPALNG------ 217 (254)
Q Consensus 148 ~~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~----~~~e~~~~l~~~~~------ 217 (254)
++++|+||+++++|+++.++++|++||+++. ... ..++++|++||..+ |.+|+.++++++.+
T Consensus 158 ~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~~l~g~~~~~~ 229 (359)
T 4dpl_A 158 AAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILSEVKRNVDEPK 229 (359)
T ss_dssp HHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS--CSB------HHHHTTCCEECCHHHHHHHHHHHHHHHTTSCCSSCCSC
T ss_pred HHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHhhccccccccc
Confidence 9999999999999999999999999998765 111 13688999999843 56788999987654
Q ss_pred ----ceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 218 ----KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 218 ----~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+++|+|+|||++|||++++|++++++++.+|++++|+
T Consensus 230 ~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~ 270 (359)
T 4dpl_A 230 LEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLE 270 (359)
T ss_dssp GGGCEEEEECEECSCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHH
Confidence 7999999999999999999999999999999999874
No 30
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=100.00 E-value=6.1e-44 Score=318.14 Aligned_cols=240 Identities=22% Similarity=0.276 Sum_probs=178.2
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCC-eeEEECCEEEEEeecCCCCCCCc
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDD-KTLLFGEKPVTVFGVRNPEEIPW 78 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g-~~l~~~~~~~~~~~~~~~~~~~~ 78 (254)
|+|+||||+|+ ||+|++|+|+|.+||++++..+...+ +..|+.. .++....+ ..+..+...+.+ ++.++++ +|
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~--~saGk~~-~~~~~~~~~~~~p~~~~~~~v-~~~~~~~-~~ 91 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASS--RSAGKKY-KDAASWKQTETLPETEQDIVV-QECKPEG-NF 91 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECT--TTTTSBH-HHHCCCCCSSCCCHHHHTCBC-EESSSCT-TG
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccc--cccCCCH-HHhcccccccccccccccceE-EeCchhh-hc
Confidence 77899999999 99999999999999999998876322 3346643 21110000 000000011222 2223331 22
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC---CCCCCeEEeeeCccccc---------------CCCCeEEc
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYK---------------PELNIVSN 140 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~---~~~~~~~v~~vn~~~i~---------------~~~~iVa~ 140 (254)
.++|+||+|+|++.++++++.++++|++++++|++ +++.|+++|++|.+.+. +++++|+|
T Consensus 92 --~~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~~~~i~~~~iIaN 169 (381)
T 3hsk_A 92 --LECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVSKGGKKPGFIICI 169 (381)
T ss_dssp --GGCSEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHHTTCCCCCEEEEE
T ss_pred --ccCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhcccccccCCcEEEC
Confidence 57999999999999999999999999966556776 35678999999987663 24679999
Q ss_pred CChhhHhHHHHHHHHhhhcC-eeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCC----hhhhhhhhcccC
Q 025368 141 ASCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKVLPAL 215 (254)
Q Consensus 141 p~C~~t~~~l~l~pL~~~~~-i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~----~~~e~~~~l~~~ 215 (254)
||||+|+++++|+||+++++ |++..+++++++||+++.... . ..++++|++||..+ |.+|+.++++.+
T Consensus 170 PgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~~----~---~~~~~~N~~Py~~~~e~k~~~Ei~kiL~~l 242 (381)
T 3hsk_A 170 SNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPGV----S---GMDILDNIVPYISGEEDKLEWETKKILGGV 242 (381)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC------C----C---HHHHTTCCBCCCTTHHHHHHHHHHHHTCEE
T ss_pred CCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCCc----c---hhhhhcChhhcccchHHHHHHHHHHHhhhc
Confidence 99999999999999999877 888888999999998763111 1 13689999999964 567888888764
Q ss_pred CC-------------ceeEEEEEceeCceeEEEEEEEecC--CCCHHHHHHHhC
Q 025368 216 NG-------------KLTGMAFRVPTVDVSVVDLTVRLEK--DASYDEIKAAIK 254 (254)
Q Consensus 216 ~~-------------~v~~~~~~vP~~rG~~~~~~~~~~~--~~~~~~v~~~~~ 254 (254)
.+ +++|+|+|||++|||++++|+++++ +++.||++++|+
T Consensus 243 ~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~~~tv~v~l~~~~~~t~eei~~~l~ 296 (381)
T 3hsk_A 243 NAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISLRFANRPAPSVEDVKQCLR 296 (381)
T ss_dssp CTTSSSEECCCTTTCEEEEECCBCSCSSCCEEEEEEEESSSSCCCHHHHHHHHH
T ss_pred ccccccccccccCCCceEEEEEEeceeccEEEEEEEEeCCCCCCCHHHHHHHHH
Confidence 33 7999999999999999999999998 899999999874
No 31
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=3e-44 Score=319.50 Aligned_cols=233 Identities=17% Similarity=0.194 Sum_probs=176.8
Q ss_pred CcEEEEEcc-CHHHHHHHH-HHHcCC--CceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCc
Q 025368 3 KVKIGINGF-GRIGRLVAR-VILQRD--DVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPW 78 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~-~L~~~p--~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 78 (254)
++||||+|+ ||+|++|+| +|.+|| .+++..+.+. ..|+.. .. +++..+.+....+++. |
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~----~aG~~~-~~----------~~~~~~~v~~~~~~~~--~ 66 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS----NAGGKA-PS----------FAKNETTLKDATSIDD--L 66 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS----CTTSBC-CT----------TCCSCCBCEETTCHHH--H
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech----hcCCCH-HH----------cCCCceEEEeCCChhH--h
Confidence 579999999 999999999 999998 4566665442 235432 11 1222222211112222 2
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe--cCC---CCCCCeEEeeeCcccccCC----CCeEEcCChhhHhHH
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAP---SKDAPMFVVGVNENEYKPE----LNIVSNASCTTNCLA 149 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi--S~~---~~~~~~~v~~vn~~~i~~~----~~iVa~p~C~~t~~~ 149 (254)
.++|+||+|+|++.++++++.++++|++++|| |++ +++.|+++||+|+++++.. .++|+|||||+|+++
T Consensus 67 --~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ianp~C~tt~~~ 144 (377)
T 3uw3_A 67 --KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNFIGGNCTVSLML 144 (377)
T ss_dssp --HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEECCHHHHHHH
T ss_pred --cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEEEcCCHHHHHHH
Confidence 58999999999999999999999999865666 554 3457899999999998641 245999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEeeeeccccccccC-------------------CC------------------CCCCcccccc
Q 025368 150 PLAKVIHDKFGIVEGLMTTVHSITATQKTVD-------------------GP------------------SSKDWRGGRA 192 (254)
Q Consensus 150 l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d-------------------~~------------------~~~~~~~~~~ 192 (254)
++|+||+++++|++..++++|++||+++... .+ +.....|+++
T Consensus 145 l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~~~~~~~~~f~~~ 224 (377)
T 3uw3_A 145 MALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMNGDAMPTSQFGVP 224 (377)
T ss_dssp HHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHHSTTSCCTTTSSC
T ss_pred HHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhcccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999855320 01 1123467778
Q ss_pred ccceeeccC-----CChhhhhhh-------hcccC------CCceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 193 ASFNIIPSS-----TGAAKAVGK-------VLPAL------NGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 193 ~~~n~~p~~-----~~~~~e~~~-------~l~~~------~~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+++|++||+ +||++|+.+ +++.. ..+++|||||||++|||++++|++|+++++.+|++++|+
T Consensus 225 ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVPv~rGh~~tv~v~~~~~~~~eei~~~l~ 304 (377)
T 3uw3_A 225 LAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIGAMRCHSQALTIKLKKDVPLDEINGILA 304 (377)
T ss_dssp CTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCSBSSEEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEecccceEEEEEEEEeCCCCCHHHHHHHHH
Confidence 999999997 467777544 44432 346999999999999999999999999999999999873
No 32
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=3.9e-44 Score=318.00 Aligned_cols=232 Identities=18% Similarity=0.178 Sum_probs=176.1
Q ss_pred cEEEEEcc-CHHHHHHHH-HHHcCC--CceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 4 VKIGINGF-GRIGRLVAR-VILQRD--DVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~-~L~~~p--~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|||||+|+ ||+|++|+| +|.+|| .+++..+.+. + .|+.. .. +.+..+.+....+++.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~---~-aG~~~-~~----------~~~~~~~~~~~~~~~~---- 61 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS---Q-IGVPA-PN----------FGKDAGMLHDAFDIES---- 61 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS---S-TTSBC-CC----------SSSCCCBCEETTCHHH----
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc---c-cCcCH-HH----------hCCCceEEEecCChhH----
Confidence 49999999 999999999 999998 4566666543 2 45532 11 1222222211112222
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe--cCC---CCCCCeEEeeeCcccccC---C-CCeEEcCChhhHhHHH
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAP---SKDAPMFVVGVNENEYKP---E-LNIVSNASCTTNCLAP 150 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi--S~~---~~~~~~~v~~vn~~~i~~---~-~~iVa~p~C~~t~~~l 150 (254)
+.++|+||+|+|++.++++++.++++|++++|| |++ +++.|+++||+|+++++. + .++|+|||||+|++++
T Consensus 62 ~~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ianp~C~tt~~~l 141 (370)
T 3pzr_A 62 LKQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFVGGNCTVSLMLM 141 (370)
T ss_dssp HTTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEECCHHHHHHHH
T ss_pred hccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEEcCChHHHHHHH
Confidence 258999999999999999999999999865677 544 345789999999999864 1 2469999999999999
Q ss_pred HHHHHhhhcCeeEEEEEeeeeccccccccC-------------------------------------CCCCCCccccccc
Q 025368 151 LAKVIHDKFGIVEGLMTTVHSITATQKTVD-------------------------------------GPSSKDWRGGRAA 193 (254)
Q Consensus 151 ~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d-------------------------------------~~~~~~~~~~~~~ 193 (254)
+|+||+++++|++..++++|++||+++... ..+.....|++++
T Consensus 142 ~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~~~~~~~~f~~~i 221 (370)
T 3pzr_A 142 ALGGLYERGLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDIDKKVAETMRSGSFPTDNFGVPL 221 (370)
T ss_dssp HHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSTTSCCTTTSSCC
T ss_pred HHHHHHHhCCCcEEEEEeEEeccccChhhHHHHHHHHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999865320 0011234577789
Q ss_pred cceeeccC-----CChhhhhhh-------hccc--CCCceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 194 SFNIIPSS-----TGAAKAVGK-------VLPA--LNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 194 ~~n~~p~~-----~~~~~e~~~-------~l~~--~~~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
++|++||+ +||++|+.+ +++. -..+++|||||||++|||++++|++++++++.+|++++|+
T Consensus 222 a~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vrVPv~rGh~~tv~v~~~~~~~~~ei~~~l~ 296 (370)
T 3pzr_A 222 AGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQNIPLDEIEEMIA 296 (370)
T ss_dssp TTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCEESCSSEEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEEecccceEEEEEEEEeCCCCCHHHHHHHHH
Confidence 99999997 456676544 3432 1346999999999999999999999999999999999873
No 33
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=8.2e-43 Score=310.51 Aligned_cols=234 Identities=17% Similarity=0.201 Sum_probs=179.6
Q ss_pred cEEEEEcc-CHHHHHHHH-HHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 4 VKIGINGF-GRIGRLVAR-VILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~-~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
+||||+|+ ||+|++|+| +|.+|+ ++++.++.+.+++ +|+.. . .++|..+.+....++++ | .
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~-~~~v~i~~~~~~s-~G~~v----~-------~~~g~~i~~~~~~~~~~--~--~ 64 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERD-FDAIRPVFFSTSQ-LGQAA----P-------SFGGTTGTLQDAFDLEA--L--K 64 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTG-GGGSEEEEEESSS-TTSBC----C-------GGGTCCCBCEETTCHHH--H--H
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCC-CCeEEEEEEEeCC-CCCCc----c-------ccCCCceEEEecCChHH--h--c
Confidence 69999998 999999999 777774 6555555555444 56632 1 01222333332222222 5 5
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCCCeEEe--cCC---CCCCCeEEeeeCcccccCC---C-CeEEcCChhhHhHHHHH
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAP---SKDAPMFVVGVNENEYKPE---L-NIVSNASCTTNCLAPLA 152 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi--S~~---~~~~~~~v~~vn~~~i~~~---~-~iVa~p~C~~t~~~l~l 152 (254)
++|+||+|+|++.++++++.++++|+|++|| |++ +++.|+++||+|++++++. . ++|+|||||+|+++++|
T Consensus 65 ~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp~Cttt~~~~al 144 (367)
T 1t4b_A 65 ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSL 144 (367)
T ss_dssp TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEECCHHHHHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeCCHHHHHHHHHH
Confidence 8999999999999999999999999976777 433 3467899999999999741 1 69999999999999999
Q ss_pred HHHhhhcCeeEEEEEeeeeccccccc-------------------cCCCC------------------CCCccccccccc
Q 025368 153 KVIHDKFGIVEGLMTTVHSITATQKT-------------------VDGPS------------------SKDWRGGRAASF 195 (254)
Q Consensus 153 ~pL~~~~~i~~~~v~~~~~~sg~~~~-------------------~d~~~------------------~~~~~~~~~~~~ 195 (254)
+||+++++|++..++++|++||+++. ++.+. .....|++++++
T Consensus 145 ~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~~~~~~~~f~~~~a~ 224 (367)
T 1t4b_A 145 GGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNFGVPLAG 224 (367)
T ss_dssp HHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHHTCSCCTTTSSCCTT
T ss_pred HHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhccccccccccCcccccchhhhC
Confidence 99999999999999999999998542 12221 123566788999
Q ss_pred eeeccCC-----Chhhhhh-------hhccc-CCCceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 196 NIIPSST-----GAAKAVG-------KVLPA-LNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 196 n~~p~~~-----~~~~e~~-------~~l~~-~~~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
|++||.. +|++|++ +++++ .+.+++++|+|||++|||+.++|++++++++.||++++|+
T Consensus 225 NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~~~v~v~l~~~~t~eei~~~l~ 296 (367)
T 1t4b_A 225 SLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEELLA 296 (367)
T ss_dssp CEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999995 4666644 45543 3447999999999999999999999999999999999874
No 34
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=3.6e-42 Score=303.66 Aligned_cols=226 Identities=23% Similarity=0.247 Sum_probs=185.0
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeee---------eec--cccccc--cccce-eecCCeeEEECCEEEEE
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVATYMF---------KYD--SVHGQW--KHHEL-KVKDDKTLLFGEKPVTV 67 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~---------~~~--s~~g~~--~~~~v-~~~~g~~l~~~~~~~~~ 67 (254)
||+||||+|+|++|+.++|+|.+||+++++++..+ +|+ +.+|+| . ..+ ....+ .+.++
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~-~~v~~~~~~-~l~v~------ 72 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDN-ERVKLFEDA-GIPVE------ 72 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCH-HHHHHHHHT-TCCCC------
T ss_pred CceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCC-ceeecccCC-eEEEC------
Confidence 15899999999999999999999999999888542 234 455654 1 111 00011 11111
Q ss_pred eecCCCCCCCcccCCCcEEEEecCCccCHHHHH-HHHHCCCCeEEecCCCC-C-CC-eEEeeeCcccccCCCCeEEcCCh
Q 025368 68 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAA-AHLKGGAKKVIISAPSK-D-AP-MFVVGVNENEYKPELNIVSNASC 143 (254)
Q Consensus 68 ~~~~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~-~~~~~G~~~~viS~~~~-~-~~-~~v~~vn~~~i~~~~~iVa~p~C 143 (254)
.+++++. .++|+||+|+|++.+.++++ .++++|++ +++|++.. + .| ++|||+|++++++ .++|+||||
T Consensus 73 ---~~~~~~~---~~vDiV~eatg~~~s~~~a~~~~l~aG~~-VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn~sC 144 (343)
T 2yyy_A 73 ---GTILDII---EDADIVVDGAPKKIGKQNLENIYKPHKVK-AILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRVVSC 144 (343)
T ss_dssp ---CBGGGTG---GGCSEEEECCCTTHHHHHHHHTTTTTTCE-EEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEECCH
T ss_pred ---CchHHhc---cCCCEEEECCCccccHHHHHHHHHHCCCE-EEECCCccccCCCceEEcccCHHHhcc-CCEEeccch
Confidence 1233442 37999999999999999996 89999963 55677754 4 78 9999999999985 789999999
Q ss_pred hhHhHHHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeecc----CCChhhhhhhhcccCCCce
Q 025368 144 TTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNGKL 219 (254)
Q Consensus 144 ~~t~~~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~----~~~~~~e~~~~l~~~~~~v 219 (254)
++++++++|+||+++|||+++.++|+|++||.+ +.+++.++|++|+ ..|+++++.+++|++++++
T Consensus 145 tT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~~-----------~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~gkl 213 (343)
T 2yyy_A 145 NTTGLCRILYAINSIADIKKARIVLVRRAADPN-----------DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEGKI 213 (343)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEEEEEEESSCTT-----------CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTTSE
T ss_pred hhHHHHHHHHHHHHHcCceEEEEEeeeeccCcC-----------cchhhHHhcccCCCCCCCCcchHHHHHhhhccccce
Confidence 999999999999999999999999999999821 3356789999999 7889999999999999999
Q ss_pred eEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 220 TGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 220 ~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+.+|+|||+++||+.+++++|+++++.||++++|+
T Consensus 214 ~~~avRVPv~~gh~~~l~v~l~~~~t~eei~~~l~ 248 (343)
T 2yyy_A 214 LTSAVIVPTTLMHMHTLMVEVDGDVSRDDILEAIK 248 (343)
T ss_dssp EEEEEEESCSSCEEEEEEEEEESCCCHHHHHHHHH
T ss_pred eeEEEEecccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999874
No 35
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=100.00 E-value=3.7e-42 Score=302.51 Aligned_cols=230 Identities=13% Similarity=0.128 Sum_probs=173.1
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCE-EEEEeecC-CCCCCCcc
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEK-PVTVFGVR-NPEEIPWA 79 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~-~~~~~~~~-~~~~~~~~ 79 (254)
|+||+|+|+ ||+|++|+++|.+||++++..+.+.+.....|+.. .++... +++. .+.+. +. +.+++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~-~~~~p~------~~~~~~~~v~-~~~~~~~~--- 72 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI-SDLHPQ------LKGIVELPLQ-PMSDISEF--- 72 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH-HHHCGG------GTTTCCCBEE-EESSGGGT---
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch-HHhCcc------ccCccceeEe-ccCCHHHH---
Confidence 579999999 99999999999999999999988764111346643 221110 1121 12221 11 23332
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC-C-CC--CC---------------e---EEeeeCcccccCCCCe
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-S-KD--AP---------------M---FVVGVNENEYKPELNI 137 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~-~-~~--~~---------------~---~v~~vn~~~i~~~~~i 137 (254)
..++|+||+|+|++.++++++.++++|++++++|++ + ++ .+ . .+||+|+++|++ +++
T Consensus 73 ~~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn~~~i~~-~~i 151 (337)
T 3dr3_A 73 SPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKE-ANL 151 (337)
T ss_dssp CTTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTCCHHHHT-CSE
T ss_pred hcCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEccccCHHHhCC-CCE
Confidence 257999999999999999999999999976666776 2 12 21 2 346779999985 899
Q ss_pred EEcCChhhHhHHHHHHHHhhh--cCeeEE-EEEeeeeccccccccCCCCCCCccccccccceeeccCC---Chhhhhhhh
Q 025368 138 VSNASCTTNCLAPLAKVIHDK--FGIVEG-LMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSST---GAAKAVGKV 211 (254)
Q Consensus 138 Va~p~C~~t~~~l~l~pL~~~--~~i~~~-~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~---~~~~e~~~~ 211 (254)
|+|||||+|+++++|+||+++ +++++. .++++|++||+++......+ +. ++ |++||.. .|.+|+.+.
T Consensus 152 IanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~----~~-~~--n~~py~~~~h~h~Pei~~~ 224 (337)
T 3dr3_A 152 IAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNS----FC-EV--SLQPYGVFTHRHQPEIATH 224 (337)
T ss_dssp EECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTS----GG-GC--SEEECSTTTCTHHHHHHHH
T ss_pred EecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccc----cc-cc--ceEccCcccceechhHHhh
Confidence 999999999999999999984 677777 88999999998654332222 22 22 8899884 467777766
Q ss_pred cccCCCceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 212 LPALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 212 l~~~~~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+.. +++|+|||||++|||++++|++++++++.+|++++|+
T Consensus 225 l~~---~v~ft~~rvPv~rG~~~ti~~~l~~~~t~eev~~~l~ 264 (337)
T 3dr3_A 225 LGA---DVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQ 264 (337)
T ss_dssp HTS---CCEEEEEEESSSSCEEEEEEEEBCTTCCHHHHHHHHH
T ss_pred hcC---CEEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHH
Confidence 543 7999999999999999999999999999999999874
No 36
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.5e-42 Score=304.25 Aligned_cols=227 Identities=13% Similarity=0.134 Sum_probs=171.6
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
|+||||+|+ ||+|++|+|+|.+||++++..+.+. +..|+.. .++. + .+ + ..+.+ ...+++++ ..
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~---~~aG~~~-~~~~--p--~~--~-~~l~~-~~~~~~~~---~~ 77 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR---TYAGKKL-EEIF--P--ST--L-ENSIL-SEFDPEKV---SK 77 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS---TTTTSBH-HHHC--G--GG--C-CCCBC-BCCCHHHH---HH
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCc---ccccCCh-HHhC--h--hh--c-cCceE-EeCCHHHh---hc
Confidence 689999999 9999999999999999999988764 3346644 2221 1 11 1 11222 11122222 25
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC-C--C-C-----------C------CeEEeeeCcccccCCCCeEEc
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-S--K-D-----------A------PMFVVGVNENEYKPELNIVSN 140 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~-~--~-~-----------~------~~~v~~vn~~~i~~~~~iVa~ 140 (254)
++|+||+|+|++.++++++.+ +|+++++.|++ + + + . +..+||+|+++|++ +++|+|
T Consensus 78 ~~Dvvf~alp~~~s~~~~~~~--~g~~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n~e~i~~-a~iIAN 154 (351)
T 1vkn_A 78 NCDVLFTALPAGASYDLVREL--KGVKIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHREEIKN-AQVVGN 154 (351)
T ss_dssp HCSEEEECCSTTHHHHHHTTC--CSCEEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHHHHHHTT-CSEEEC
T ss_pred CCCEEEECCCcHHHHHHHHHh--CCCEEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccCHHHhcc-CCEEeC
Confidence 799999999999999999988 89854444765 2 1 1 1 55668899999996 899999
Q ss_pred CChhhHhHHHHHHHHhhhcCee--EEEEEeeeeccccccccCCCCCCCccccccccceeeccC---CChhhhhhhhcccC
Q 025368 141 ASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSS---TGAAKAVGKVLPAL 215 (254)
Q Consensus 141 p~C~~t~~~l~l~pL~~~~~i~--~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~---~~~~~e~~~~l~~~ 215 (254)
||||+|+++++|+||+++++|+ +..+++++++||+++.... .+.+. +...|+.||. |.|.+|+.+.+..+
T Consensus 155 PgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~----~~~~~-e~~~n~~~y~~~~h~h~pEi~~el~~i 229 (351)
T 1vkn_A 155 PGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKV----DYLFS-EVNESLRPYNVAKHRHVPEMEQELGKI 229 (351)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSG----GGBHH-HHTTCCEECSCSCCTHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCccccc----ccchh-HHhcccccCCccccccHHHHHHHHHHh
Confidence 9999999999999999999998 8888899999998764321 11222 4566777777 55888887766533
Q ss_pred ---CCceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 216 ---NGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 216 ---~~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
..+++|||+|||++|||++++|++++ ++.+|++++|+
T Consensus 230 ~~~~~~v~ftp~rvPv~rG~~~tv~v~l~--~~~eei~~~l~ 269 (351)
T 1vkn_A 230 SGKKVNVVFTPHLVPMTRGILSTIYVKTD--KSLEEIHEAYL 269 (351)
T ss_dssp HTSCCEEEEEEEEESSSSCEEEEEEEECS--SCHHHHHHHHH
T ss_pred hCCCCCEEEEEEEeccccEEEEEEEEEEc--CCHHHHHHHHH
Confidence 34799999999999999999999997 89999999874
No 37
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.3e-41 Score=300.05 Aligned_cols=229 Identities=23% Similarity=0.301 Sum_probs=173.9
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeecc---ccccccccceeec-CCeeE-EECCEEEEEeecCCCCCCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDS---VHGQWKHHELKVK-DDKTL-LFGEKPVTVFGVRNPEEIP 77 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s---~~g~~~~~~v~~~-~g~~l-~~~~~~~~~~~~~~~~~~~ 77 (254)
|+||||+|+|++|++++|+|.+||+++++++..+.... ..|+.. ..+... ++ .+ .+.+..+.+. .+++++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g-~~~~~~~~~-~v~~~~~~~l~v~--~~~~~~- 75 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKG-YDLYVAIPE-RVKLFEKAGIEVA--GTVDDM- 75 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTT-CCEEESSGG-GHHHHHHTTCCCC--EEHHHH-
T ss_pred CeEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcc-hhhcccccc-ceeeecCCceEEc--CCHHHH-
Confidence 47999999999999999999999999999986543110 001100 000000 00 00 0000001110 011222
Q ss_pred cccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe-cCCCCCC--CeEEeeeCcccccCCCCeEEcCChhhHhHHHHHHH
Q 025368 78 WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII-SAPSKDA--PMFVVGVNENEYKPELNIVSNASCTTNCLAPLAKV 154 (254)
Q Consensus 78 ~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi-S~~~~~~--~~~v~~vn~~~i~~~~~iVa~p~C~~t~~~l~l~p 154 (254)
..++|+||+|+|++.+.++++.++++|++ ++. |++.++. |++|||+|++++++ .++|+|||||+|+++++|+|
T Consensus 76 --~~~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~tt~l~~~l~p 151 (337)
T 1cf2_P 76 --LDEADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNTTGLCRTLKP 151 (337)
T ss_dssp --HHTCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHHHHHHHHHHH
T ss_pred --hcCCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHHHHHHHHHHH
Confidence 14799999999999999999999999985 444 4443233 89999999999985 79999999999999999999
Q ss_pred HhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeecc----CCChhhhhhhhcccCCCceeEEEEEceeCc
Q 025368 155 IHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNGKLTGMAFRVPTVD 230 (254)
Q Consensus 155 L~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~----~~~~~~e~~~~l~~~~~~v~~~~~~vP~~r 230 (254)
|+++++|+++.++++|+.|| ++ .+++.+++|++|| .++|.+|+.+++ ++ +++++|||||++|
T Consensus 152 L~~~~gI~~~~vtt~~a~s~-------p~----~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l--~v~~t~~rVPv~~ 217 (337)
T 1cf2_P 152 LHDSFGIKKVRAVIVRRGAD-------PA----QVSKGPINAIIPNPPKLPSHHGPDVKTVL-DI--NIDTMAVIVPTTL 217 (337)
T ss_dssp HHHHHCEEEEEEEEEEESSC-------TT----CTTCCCSSCCEESSSSSSCTHHHHHHTTS-CC--CEEEEEEEESCCS
T ss_pred HHHhcCcceeEEEEEEEeec-------CC----ccccchhcCEEeccCCCCCcchHHHHhhh-ee--EEEEEEEEcCccC
Confidence 99999999999999998876 21 3345789999999 467899999999 76 4999999999999
Q ss_pred eeEEEEEEEecCCCCHHHHHHHhC
Q 025368 231 VSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 231 G~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
||+.++|++|+++++.+|++++|+
T Consensus 218 g~~~~~~v~l~~~~t~eei~~~~~ 241 (337)
T 1cf2_P 218 MHQHNVMVEVEETPTVDDIIDVFE 241 (337)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHH
T ss_pred eEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999874
No 38
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=9.6e-42 Score=302.68 Aligned_cols=235 Identities=20% Similarity=0.198 Sum_probs=179.8
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEee-eeeeccccccccccceeec--CCeeEEECCEEEEEeecCCCCCCC
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVATY-MFKYDSVHGQWKHHELKVK--DDKTLLFGEKPVTVFGVRNPEEIP 77 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~-~~~~~s~~g~~~~~~v~~~--~g~~l~~~~~~~~~~~~~~~~~~~ 77 (254)
+|+||||+|+ |++|++++|+|.+||+++++.+. +.+ ..|+.. .++... .+ .+..++..+.+ .+.+++.
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~---~~g~~~-~~~~~~~~~~-~~~~~~~~~~~-~~~d~~~-- 74 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPS---KIGKKY-KDAVKWIEQG-DIPEEVQDLPI-VSTNYED-- 74 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGG---GTTSBH-HHHCCCCSSS-SCCHHHHTCBE-ECSSGGG--
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChh---hcCCCH-HHhcCccccc-ccccCCceeEE-eeCCHHH--
Confidence 4689999998 99999999999999999999886 332 123321 110000 00 00001111222 2123332
Q ss_pred cccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC---CCCCCeEEeeeCcccccC----------CCCeEEcCChh
Q 025368 78 WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKP----------ELNIVSNASCT 144 (254)
Q Consensus 78 ~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~---~~~~~~~v~~vn~~~i~~----------~~~iVa~p~C~ 144 (254)
| .++|+||+|+|++.+.++++.++++|++++..|++ +++.|.++||+|++.+.. ++++|+|||||
T Consensus 75 ~--~~vDvVf~atp~~~s~~~a~~~~~aG~~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~~iIanpgC~ 152 (350)
T 2ep5_A 75 H--KDVDVVLSALPNELAESIELELVKNGKIVVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKGILVKNPNCT 152 (350)
T ss_dssp G--TTCSEEEECCCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSSEEEECCCHH
T ss_pred h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCceEEEcCchH
Confidence 3 58999999999999999999999999963334655 345789999999876651 35799999999
Q ss_pred hHhHHHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCC----hhhhhhhhcccCCC---
Q 025368 145 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKVLPALNG--- 217 (254)
Q Consensus 145 ~t~~~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~----~~~e~~~~l~~~~~--- 217 (254)
+|+++++|+||++++++++..++++|++||+++.. . + .+.+++|++||..+ |.+|+.++|+++.+
T Consensus 153 tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~~--~-~-----~~~~~~ni~py~~~~e~k~~~E~~~~l~~~~g~~~ 224 (350)
T 2ep5_A 153 AAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYNG--I-S-----FMAIEGNIIPYIKGEEDKIAKELTKLNGKLENNQI 224 (350)
T ss_dssp HHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSSS--S-B-----HHHHTTCCBCCCTTHHHHHHHHHHHHTCEECSSSE
T ss_pred HHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCCC--C-C-----ChHHhCCEEeccCCcchHHHHHHHHHHhhcccccc
Confidence 99999999999998899999999999999987651 1 1 24688999999965 67788899987644
Q ss_pred -----ceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 218 -----KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 218 -----~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+++|+|||||++|||++++|++++++++.+|++++|+
T Consensus 225 ~~~~~~v~~t~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~ 266 (350)
T 2ep5_A 225 IPANLDSTVTSIRVPTRVGHMGVINIVTNERINIEEIKKTLK 266 (350)
T ss_dssp ECCCCEEEEEEEECSCSSCEEEEEEEECCSCCCHHHHHHHHH
T ss_pred ccccccEEEEeEEecccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 7999999999999999999999999999999999874
No 39
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=1e-40 Score=295.36 Aligned_cols=228 Identities=14% Similarity=0.041 Sum_probs=174.9
Q ss_pred CC-CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECC-EEEEEeecCCCCCCC
Q 025368 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGE-KPVTVFGVRNPEEIP 77 (254)
Q Consensus 1 M~-~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~-~~~~~~~~~~~~~~~ 77 (254)
|+ |+||+|+|+ |++|++++|+|.+||+++++.+.+.+ ..|+.. .++. + . +.+ ..+.+. +.+ +
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~---~~g~~~-~~~~---~-~--~~g~~~~~~~---~~~--~ 65 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRR---FAGEPV-HFVH---P-N--LRGRTNLKFV---PPE--K 65 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCST---TTTSBG-GGTC---G-G--GTTTCCCBCB---CGG--G
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECch---hhCchh-HHhC---c-h--hcCccccccc---chh--H
Confidence 54 689999998 99999999999999999999887642 123322 1110 0 0 112 112221 222 3
Q ss_pred cccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC-CC--------------------CCCeEEeeeCcccccCCCC
Q 025368 78 WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-SK--------------------DAPMFVVGVNENEYKPELN 136 (254)
Q Consensus 78 ~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~-~~--------------------~~~~~v~~vn~~~i~~~~~ 136 (254)
| .++|+||+|+|++.+.+.++.++++|++++++|++ +- +.+..+||+|++++++ ++
T Consensus 66 ~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~~i~~-~~ 142 (345)
T 2ozp_A 66 L--EPADILVLALPHGVFAREFDRYSALAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYREALKG-AD 142 (345)
T ss_dssp C--CCCSEEEECCCTTHHHHTHHHHHTTCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHHHHHT-CS
T ss_pred h--cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHHHhhc-CC
Confidence 5 58999999999999999999999999965445775 21 2344557779999996 89
Q ss_pred eEEcCChhhHhHHHHHHHHhhhcCee--EEEEEeeeeccccccc-cCCCCCCCccccccccceeeccCC---Chhhhhhh
Q 025368 137 IVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSSKDWRGGRAASFNIIPSST---GAAKAVGK 210 (254)
Q Consensus 137 iVa~p~C~~t~~~l~l~pL~~~~~i~--~~~v~~~~~~sg~~~~-~d~~~~~~~~~~~~~~~n~~p~~~---~~~~e~~~ 210 (254)
+|+|||||+|+++++|+||+++++|+ +..++++|++||+++. .+.. ++. ....|++||.. .|.+|+.+
T Consensus 143 iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~-----~~~-~~~~n~~py~~~~h~~~pei~~ 216 (345)
T 2ozp_A 143 WIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPAS-----HHP-ERAGSIRVYKPTGHRHTAEVVE 216 (345)
T ss_dssp EEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGG-----CHH-HHTTCCEEEECSCCTHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCccccccc-----cch-hhccccccCCCCCccChHhHHH
Confidence 99999999999999999999999999 8899999999998754 3322 222 46778889884 47888887
Q ss_pred hcccCCC-ceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 211 VLPALNG-KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 211 ~l~~~~~-~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
.++ .+ +++|+|+|||++|||+.++|++++++++.+|++++|+
T Consensus 217 ~l~--~~~~v~~~~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~ 259 (345)
T 2ozp_A 217 NLP--GRPEVHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYR 259 (345)
T ss_dssp TSS--SCCCEEEEEEECSCSSCEEEEEEEEBCTTCCHHHHHHHHH
T ss_pred HhC--CCCCeEEEEEEeccccEEEEEEEEEeCCCCCHHHHHHHHH
Confidence 776 23 7999999999999999999999999999999999874
No 40
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=100.00 E-value=3.1e-41 Score=298.65 Aligned_cols=234 Identities=14% Similarity=0.070 Sum_probs=175.0
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCC-----CceeEEeeeeeeccccccccccceeecCCeeEEECC-EEEEEeecCCC
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRD-----DVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGE-KPVTVFGVRNP 73 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p-----~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~-~~~~~~~~~~~ 73 (254)
|+|+||+|+|+ |++|++|+|+|.+|| +++++.+.+.+ ..|+.. ..+. + .+ .+ ..+.+.. .++
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~---~agk~~-~~~~--~--~l--~~~~~~~~~~-~~~ 75 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAAT---SAGSTL-GEHH--P--HL--TPLAHRVVEP-TEA 75 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESS---CTTSBG-GGTC--T--TC--GGGTTCBCEE-CCH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCC---cCCCch-hhhc--c--cc--cccceeeecc-CCH
Confidence 66789999999 999999999999999 89998886543 123322 1110 0 01 11 0111111 122
Q ss_pred CCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC-C-CC-C--------------CeEEeee--CcccccCC
Q 025368 74 EEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-S-KD-A--------------PMFVVGV--NENEYKPE 134 (254)
Q Consensus 74 ~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~-~-~~-~--------------~~~v~~v--n~~~i~~~ 134 (254)
++ | .++|+||+|+|++.++++++.+ ++|++++++|++ + .+ . +..+||+ |+++|+.
T Consensus 76 ~~--~--~~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~~~i~~- 149 (352)
T 2nqt_A 76 AV--L--GGHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGARDQLRG- 149 (352)
T ss_dssp HH--H--TTCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHHHHHTT-
T ss_pred HH--h--cCCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCHHHHhc-
Confidence 22 3 4799999999999999999999 999865556776 3 12 2 6777899 9999985
Q ss_pred CCeEEcCChhhHhHHHHHHHHhhhcCee-EEEEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcc
Q 025368 135 LNIVSNASCTTNCLAPLAKVIHDKFGIV-EGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLP 213 (254)
Q Consensus 135 ~~iVa~p~C~~t~~~l~l~pL~~~~~i~-~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~ 213 (254)
+++|+|||||+|+++++|+||+++++|+ +..+++++++||+++.....++.+...++..++|+.|. |.|.+|+.+.+.
T Consensus 150 ~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~~~~~~~~~~ay~~~~~-h~h~pEi~~e~~ 228 (352)
T 2nqt_A 150 TRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGV-HRHTPEIAQGLR 228 (352)
T ss_dssp CSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGSHHHHTTCCEECSTTTT-STTHHHHHHHHH
T ss_pred CCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCccccccccHHHHhhhcccccCCCc-ceecHHHHHHHH
Confidence 8999999999999999999999999998 88889999999985543222233445555567777661 458898876655
Q ss_pred cC---CCceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 214 AL---NGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 214 ~~---~~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
.+ +.+++|+|||||++|||++++|++++++ .+|++++|+
T Consensus 229 ki~~~~~~v~ft~~rvP~~rG~~~ti~~~l~~~--~~ei~~~~~ 270 (352)
T 2nqt_A 229 AVTDRDVSVSFTPVLIPASRGILATCTARTRSP--LSQLRAAYE 270 (352)
T ss_dssp TTCSSCCEEEEEEEECSCSSCEEEEEEEECCSC--HHHHHHHHH
T ss_pred HHhCCCCCEEEEEEEEccccEEEEEEEEEECCC--HHHHHHHHH
Confidence 44 4579999999999999999999999877 899998873
No 41
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=1.6e-40 Score=295.34 Aligned_cols=229 Identities=10% Similarity=0.104 Sum_probs=173.0
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCE---EEEEeecCCCCCC
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEK---PVTVFGVRNPEEI 76 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~---~~~~~~~~~~~~~ 76 (254)
|+++||+|+|+ |++|++++|+|.+||+++++.+.+++ ..|+.. .++. + . +.+. .+.+ . + ++
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~---~~g~~~-~~~~---~-~--~~~~v~~dl~~-~--~-~~- 78 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR---KAGQSM-ESVF---P-H--LRAQKLPTLVS-V--K-DA- 78 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST---TTTSCH-HHHC---G-G--GTTSCCCCCBC-G--G-GC-
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch---hcCCCH-HHhC---c-h--hcCccccccee-c--c-hh-
Confidence 44589999998 99999999999999999999987643 122211 1100 0 0 1110 1111 1 1 23
Q ss_pred CcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC-CC---------------------CCCeEEeeeCcccccCC
Q 025368 77 PWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-SK---------------------DAPMFVVGVNENEYKPE 134 (254)
Q Consensus 77 ~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~-~~---------------------~~~~~v~~vn~~~i~~~ 134 (254)
.| .++|+||+|+|++.++++++.+ ++|+++++.|++ +- +.+..+||+|++++++
T Consensus 79 ~~--~~vDvVf~atp~~~s~~~a~~~-~aG~~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~n~~~i~~- 154 (359)
T 1xyg_A 79 DF--STVDAVFCCLPHGTTQEIIKEL-PTALKIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEILREDIKK- 154 (359)
T ss_dssp CG--GGCSEEEECCCTTTHHHHHHTS-CTTCEEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHHHHHHHHT-
T ss_pred Hh--cCCCEEEEcCCchhHHHHHHHH-hCCCEEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCccCHHHhcc-
Confidence 35 4799999999999999999999 999954445775 21 1233446679999996
Q ss_pred CCeEEcCChhhHhHHHHHHHHhhhcCee--EEEEEeeeeccccccc-cCCCCCCCccccccccceeeccC---CChhhhh
Q 025368 135 LNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSSKDWRGGRAASFNIIPSS---TGAAKAV 208 (254)
Q Consensus 135 ~~iVa~p~C~~t~~~l~l~pL~~~~~i~--~~~v~~~~~~sg~~~~-~d~~~~~~~~~~~~~~~n~~p~~---~~~~~e~ 208 (254)
+++|+|||||+|+++++|+||+++++|+ +..++++|++||+++. .+.. ++. ....|++||. |.|.+|+
T Consensus 155 ~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~-----~~~-~~~~ni~py~~~~h~h~pEi 228 (359)
T 1xyg_A 155 ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEAN-----LYS-EIAEGISSYGVTRHRHVPEI 228 (359)
T ss_dssp CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGG-----BHH-HHTTCCEECSCSCCTHHHHH
T ss_pred CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhh-----hhH-HHhcCeecccccccccHHHH
Confidence 8999999999999999999999999999 8889999999998764 3321 222 3667888888 5588888
Q ss_pred hhhcccC---CCceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 209 GKVLPAL---NGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 209 ~~~l~~~---~~~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
.+.+..+ +.+++|+|+|||++|||+.++|++++++++.||++++|+
T Consensus 229 ~~~l~~~~~~~~~v~~t~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~ 277 (359)
T 1xyg_A 229 EQGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVRTEDLHQQLK 277 (359)
T ss_dssp HHHHHHHHTSCCCCEEECEEESSSSCEEEEEEEEBCTTCCHHHHHHHHH
T ss_pred HHHHHHhcCCCCCEEEEEEEecccceEEEEEEEEeCCCCCHHHHHHHHH
Confidence 7665532 237999999999999999999999999999999999874
No 42
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1e-39 Score=290.29 Aligned_cols=238 Identities=21% Similarity=0.257 Sum_probs=176.5
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecC-CeeEEECCEEEEEeecCCCCCCCcc
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~-g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
||+||+|+|+ |++|++++|+|.+||+++++.+.... +..|+.. .++.... ...+..++..+.+ ...++++ |.
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~--~~~g~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~ 80 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASE--RSAGKKY-KDACYWFQDRDIPENIKDMVV-IPTDPKH--EE 80 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECT--TTTTSBH-HHHSCCCCSSCCCHHHHTCBC-EESCTTS--GG
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccc--ccccccH-HHhcccccccccccCceeeEE-EeCCHHH--Hh
Confidence 3589999998 99999999999999999998886311 1123321 1100000 0000000111122 1123443 42
Q ss_pred cC-CCcEEEEecCCccCHHHHHHHHHCCCCeEEecCC---CCCCCeEEeeeCcccccC----------CCCeEEcCChhh
Q 025368 80 ET-GAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNENEYKP----------ELNIVSNASCTT 145 (254)
Q Consensus 80 ~~-~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~---~~~~~~~v~~vn~~~i~~----------~~~iVa~p~C~~ 145 (254)
+ ++|+||+|+|++.+.+.++.++++|++++..|++ +++.|.++||+|++.+.. ++++|+|||||+
T Consensus 81 -~~~~DvV~~atp~~~~~~~a~~~~~aG~~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~~iIanpgC~t 159 (354)
T 1ys4_A 81 -FEDVDIVFSALPSDLAKKFEPEFAKEGKLIFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWDGAIITNPNCST 159 (354)
T ss_dssp -GTTCCEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCCSSEEEECCCHHH
T ss_pred -cCCCCEEEECCCchHHHHHHHHHHHCCCEEEECCchhcCCCCCCccCcccCHHHhcChhhhhhhcccCCeEEECCCHHH
Confidence 4 8999999999999999999999999953223554 345788899999876651 256999999999
Q ss_pred HhHHHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeeccCCC----hhhhhhhhcccCCC----
Q 025368 146 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKVLPALNG---- 217 (254)
Q Consensus 146 t~~~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~----~~~e~~~~l~~~~~---- 217 (254)
|+++++|+||+++++|++..++++|++||+++.. . + .+.+++|++||..+ |.+|+.++|+++.+
T Consensus 160 t~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~~--~-~-----~~~~~~ni~py~~~~~~k~~~Ei~~~l~~~~g~~~~ 231 (354)
T 1ys4_A 160 ICAVITLKPIMDKFGLEAVFIATMQAVSGAGYNG--V-P-----SMAILDNLIPFIKNEEEKMQTESLKLLGTLKDGKVE 231 (354)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTTT--S-C-----HHHHTTCCBSCCTTHHHHHHHHHHHHTSEEETTEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCccc--c-c-----chHHhCCEEeccCchhhHHHHHHHHHHhcccccccc
Confidence 9999999999998789999999999999987651 1 1 23578999999955 67788888876532
Q ss_pred ----ceeEEEEEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 218 ----KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 218 ----~v~~~~~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+++|+|||||++|||++++|++++++++.||++++|+
T Consensus 232 ~~~~~v~~~~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~ 272 (354)
T 1ys4_A 232 LANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVMD 272 (354)
T ss_dssp CCCCEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHH
T ss_pred CCCceEEEEEEEecccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 7999999999999999999999999999999999874
No 43
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=4.3e-36 Score=265.10 Aligned_cols=222 Identities=18% Similarity=0.222 Sum_probs=170.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc---
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA--- 79 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--- 79 (254)
|+||||+|+|++|++++|+|.+||+++++++..+..+...... . ..| ++++...+++++ |.
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a-----~-~~g---------~~~~~~~~~~~~-~~~~~ 64 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIA-----H-RRG---------IRIYVPQQSIKK-FEESG 64 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHH-----H-HTT---------CCEECCGGGHHH-HHTTT
T ss_pred CeEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHH-----H-hcC---------cceecCcCHHHH-hcccc
Confidence 3799999999999999999999999999998764311100000 0 001 111110011111 11
Q ss_pred ----------cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCCC--CCeEEeeeCcccccCCCCeEEcCChhhHh
Q 025368 80 ----------ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD--APMFVVGVNENEYKPELNIVSNASCTTNC 147 (254)
Q Consensus 80 ----------~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~~--~~~~v~~vn~~~i~~~~~iVa~p~C~~t~ 147 (254)
..++|+||+|||++.+++.++.++++|++++++|++..+ .+++++++|.+++.+ .++|+||||++|+
T Consensus 65 v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~iIsnpsCtt~~ 143 (340)
T 1b7g_O 65 IPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKYIRVVSCNTTA 143 (340)
T ss_dssp CCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSEEEECCHHHHH
T ss_pred cccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCCcccCCcHHHH
Confidence 136899999999999999999999999976666887432 368999999777654 5799999999999
Q ss_pred HHHHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeecc----CCChhhhhhhhcccCCCceeEEE
Q 025368 148 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNGKLTGMA 223 (254)
Q Consensus 148 ~~l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~----~~~~~~e~~~~l~~~~~~v~~~~ 223 (254)
++++|+||+++|+|+++.++++|+.. + + +.. .+....|++|. ..++.+|+.+++|+++ ++++|
T Consensus 144 l~~~lk~L~~~~gI~~~~~tt~~~~~------~-~-~~~---~~~~~~niip~~~~i~t~~a~ev~~vlp~l~--l~~~a 210 (340)
T 1b7g_O 144 LLRTICTVNKVSKVEKVRATIVRRAA------D-Q-KEV---KKGPINSLVPDPATVPSHHAKDVNSVIRNLD--IATMA 210 (340)
T ss_dssp HHHHHHHHHTTSCEEEEEEEEEEESS------C-T-TCC---SCCCSSCCEESSSSSSCTHHHHHHTTSTTCE--EEEEE
T ss_pred HHHHHHHHHHhCCeEEEEEEEEeccC------C-c-ccc---hHHHHcCCCCCCcCCCCCchhHHHHhCCCCc--EEEEE
Confidence 99999999999999999999999753 2 2 122 23567788864 3568899999999874 99999
Q ss_pred EEceeCceeEEEEEEEecCCCCHHHHHHHhC
Q 025368 224 FRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 254 (254)
Q Consensus 224 ~~vP~~rG~~~~~~~~~~~~~~~~~v~~~~~ 254 (254)
+|||+++||+.+++++++++++.|||+++|+
T Consensus 211 ~rVPv~~gh~~~l~v~l~~~~t~eei~~~l~ 241 (340)
T 1b7g_O 211 VIAPTTLMHMHFINITLKDKVEKKDILSVLE 241 (340)
T ss_dssp EEESCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred EEeccCCeEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999999999874
No 44
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=5.1e-33 Score=245.29 Aligned_cols=223 Identities=26% Similarity=0.297 Sum_probs=173.3
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEE--ECCE-------EEEEeecCC
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLL--FGEK-------PVTVFGVRN 72 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~--~~~~-------~~~~~~~~~ 72 (254)
||+||||+|+|++|++++|+|.+||+++++++..+..+ ..+.+. . ..|-.+. +.+. .+.+. .+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~-~~~~~~----~-~~g~~~~~~~~~~v~~~~~~~~~v~--~d 72 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPD-FEAYRA----K-ELGIPVYAASEEFIPRFEKEGFEVA--GT 72 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCS-HHHHHH----H-HTTCCEEESSGGGHHHHHHHTCCCS--CB
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHH-HHHHHH----H-hcCccccccccccceeccCCceEEc--Cc
Confidence 15899999999999999999999999999998765311 111110 0 0000000 0000 00111 12
Q ss_pred CCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCC-C-C-CeEEeeeCcccccCCCCeEEcCChhhHhHH
Q 025368 73 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-D-A-PMFVVGVNENEYKPELNIVSNASCTTNCLA 149 (254)
Q Consensus 73 ~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~-~-~-~~~v~~vn~~~i~~~~~iVa~p~C~~t~~~ 149 (254)
++++ ..++|+||+|||++.+.+.++.++++|+ ++++|++.+ + . +.+||++|.+++++ .++|+||+|++++++
T Consensus 73 ~~~l---~~~vDvV~~aTp~~~h~~~a~~~l~aGk-~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~t~~l~ 147 (334)
T 2czc_A 73 LNDL---LEKVDIIVDATPGGIGAKNKPLYEKAGV-KAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCNTTGLV 147 (334)
T ss_dssp HHHH---HTTCSEEEECCSTTHHHHHHHHHHHHTC-EEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHHHHHHH
T ss_pred HHHh---ccCCCEEEECCCccccHHHHHHHHHcCC-ceEeecccccccccceEEeccCHHHHhh-CCcEEecCcHHHHHH
Confidence 3333 2379999999999999999999999996 355677743 4 3 58999999999985 789999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceeecc---CCChhhhhhhhcccCCCceeEEEEEc
Q 025368 150 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS---STGAAKAVGKVLPALNGKLTGMAFRV 226 (254)
Q Consensus 150 l~l~pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~---~~~~~~e~~~~l~~~~~~v~~~~~~v 226 (254)
+++++|++. |+++.++++|++||.+ ++++..++|++|+ .+++.+++.+++| +. ++.+++||
T Consensus 148 P~~~~l~~~--I~~g~i~ti~a~s~~~-----------~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~--l~~~~~rV 211 (334)
T 2czc_A 148 RTLSAIREY--ADYVYAVMIRRAADPN-----------DTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN--IETMAFVV 211 (334)
T ss_dssp HHHHHHGGG--EEEEEEEEEEESSCTT-----------CCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC--EEEEEEEE
T ss_pred HHHHHHHHH--hccccEEEEEEecCcc-----------ccccChhhcEEeccCCCCchhhhhheEEE-EE--EEEEEEEc
Confidence 999999876 9999889999998742 3456788999999 6789999999998 65 99999999
Q ss_pred eeCceeEEEEEEEecCCCCHHHHHHHh
Q 025368 227 PTVDVSVVDLTVRLEKDASYDEIKAAI 253 (254)
Q Consensus 227 P~~rG~~~~~~~~~~~~~~~~~v~~~~ 253 (254)
|+++||+.+++++++++++.||++++|
T Consensus 212 Pv~~~~~~~~~~~~~~~~~~e~i~~~~ 238 (334)
T 2czc_A 212 PTTLMHVHSVMVELKKPLTKDDVIDIF 238 (334)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHH
T ss_pred CCCceEEEEEEEEECCCCCHHHHHHHH
Confidence 999999999999999999999999976
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=99.14 E-value=1.5e-11 Score=106.89 Aligned_cols=213 Identities=18% Similarity=0.181 Sum_probs=119.2
Q ss_pred CC-CcEEEEEccCHHHHHHHHHHHc-CCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCC-C
Q 025368 1 MG-KVKIGINGFGRIGRLVARVILQ-RDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEI-P 77 (254)
Q Consensus 1 M~-~~~V~IvG~G~~G~~l~~~L~~-~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~-~ 77 (254)
|+ ++||||+|+|++|+.+++.|.+ +|+++++.+.....++ .++.. ...-| . .... .+.+++ +
T Consensus 1 M~~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~-~~~~~----a~~~g------~---~~~~-~~~e~ll~ 65 (312)
T 1nvm_B 1 MNQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS-DGLAR----AQRMG------V---TTTY-AGVEGLIK 65 (312)
T ss_dssp CCSCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTC-HHHHH----HHHTT------C---CEES-SHHHHHHH
T ss_pred CCCCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhh-hHHHH----HHHcC------C---Cccc-CCHHHHHh
Confidence 53 6899999999999999999977 8999999887653111 01100 00111 1 0111 111222 0
Q ss_pred c-ccCCCcEEEEecCCccCHHHHHHHHHC--CCCeEEecCCCCCCCeEEeeeCcccccC--CCCeEEcCChhhHhHHHHH
Q 025368 78 W-AETGAEYVVESTGVFTDKDKAAAHLKG--GAKKVIISAPSKDAPMFVVGVNENEYKP--ELNIVSNASCTTNCLAPLA 152 (254)
Q Consensus 78 ~-~~~~~Dvv~~a~~~~~s~~~~~~~~~~--G~~~~viS~~~~~~~~~v~~vn~~~i~~--~~~iVa~p~C~~t~~~l~l 152 (254)
. ...++|+||+|+|+....+++..++++ |+.+++.+... -.|..+|++|.+++.. ..+++++|||...-+..++
T Consensus 66 ~~~~~~iDvV~~atp~~~h~~~a~~al~a~~Gk~Vi~ekp~~-~g~~~~p~v~~~~~~~~~~~~lva~~g~~~ipl~~a~ 144 (312)
T 1nvm_B 66 LPEFADIDFVFDATSASAHVQNEALLRQAKPGIRLIDLTPAA-IGPYCVPVVNLEEHLGKLNVNMVTCGGQATIPMVAAV 144 (312)
T ss_dssp SGGGGGEEEEEECSCHHHHHHHHHHHHHHCTTCEEEECSTTC-SSCBCCHHHHTTTTTTCSEEECCCHHHHHHHHHHHHH
T ss_pred ccCCCCCcEEEECCChHHHHHHHHHHHHhCCCCEEEEcCccc-ccccccCccCHHHHHhccCCcEEEeCCcccchHHHHh
Confidence 0 014689999999999999999999999 98322223221 1355567788777642 1357888899765555555
Q ss_pred HHHhhhcCeeEE-EEEeeeeccccccccCCCCCCCccccccccceeeccCCChhhhhhhhcccC-CC--ceeEEEEEcee
Q 025368 153 KVIHDKFGIVEG-LMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPAL-NG--KLTGMAFRVPT 228 (254)
Q Consensus 153 ~pL~~~~~i~~~-~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~p~~~~~~~e~~~~l~~~-~~--~v~~~~~~vP~ 228 (254)
.+++ ..... .+.++++.|. +.... ...+-++.. ....+ +.+... .+ .+.|+|+..|+
T Consensus 145 ~~~~---~~~~~~iv~~i~sgs~-G~~~~------------~~l~e~~~~--~~~ai-~~~gg~~~~k~il~~~p~~~p~ 205 (312)
T 1nvm_B 145 SRVA---KVHYAEIVASISSKSA-GPGTR------------ANIDEFTET--TSKAI-EVIGGAAKGKAIIIMNPAEPPL 205 (312)
T ss_dssp HTTS---CEEEEEEEEEEEGGGS-CHHHH------------TCHHHHHHH--HHHHH-HHTTCCSSEEEEEEEECCSSCC
T ss_pred hhhc---cchhHhHhhhhhcccc-CCCcc------------cchhhHHHH--HHHHH-HHhhhccCCCcEEEEecCCCCc
Confidence 4444 33322 1223333220 00000 000000100 00111 222211 11 36799999999
Q ss_pred CceeEEEEEEEecCCCCHHHHHH
Q 025368 229 VDVSVVDLTVRLEKDASYDEIKA 251 (254)
Q Consensus 229 ~rG~~~~~~~~~~~~~~~~~v~~ 251 (254)
+ +..++|+.++ +++.+++.+
T Consensus 206 ~--~~~tv~~~~~-~~~~~~~~~ 225 (312)
T 1nvm_B 206 I--MRDTVYVLSA-AADQAAVAA 225 (312)
T ss_dssp C--EEEEEEEEES-SCCHHHHHH
T ss_pred c--cceeEEEEeC-CCCHHHHHH
Confidence 9 8899999997 777766554
No 46
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=99.07 E-value=3.1e-11 Score=102.85 Aligned_cols=208 Identities=19% Similarity=0.186 Sum_probs=113.6
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|.|+||+|+|+ |++|+++++.+.++|+++++++..+......|+-. +++ .| + +..+.++ .|.+++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~-gel---~g--~---~~gv~v~--~dl~~l--- 70 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDA-GAF---LG--K---QTGVALT--DDIERV--- 70 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBT-TTT---TT--C---CCSCBCB--CCHHHH---
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccH-HHH---hC--C---CCCceec--CCHHHH---
Confidence 77899999997 99999999999999999999987653211122211 110 01 0 0012222 233333
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe--cCCCCCCCeEEeeeCcccccCCCCeEEcCChhhHh-HHH-HHHHH
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNC-LAP-LAKVI 155 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi--S~~~~~~~~~v~~vn~~~i~~~~~iVa~p~C~~t~-~~l-~l~pL 155 (254)
..++|+||++|++....++++.++++|++ +|+ ++++++.. .++ +++.++..++-.||.+.-. +.. .+.-+
T Consensus 71 l~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVigTTG~s~~~~---~~L--~~aa~~~~vv~a~N~s~Gv~l~~~~~~~a 144 (272)
T 4f3y_A 71 CAEADYLIDFTLPEGTLVHLDAALRHDVK-LVIGTTGFSEPQK---AQL--RAAGEKIALVFSANMSVGVNVTMKLLEFA 144 (272)
T ss_dssp HHHCSEEEECSCHHHHHHHHHHHHHHTCE-EEECCCCCCHHHH---HHH--HHHTTTSEEEECSCCCHHHHHHHHHHHHH
T ss_pred hcCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEECCCCCHHHH---HHH--HHHhccCCEEEECCCCHHHHHHHHHHHHH
Confidence 24689999999999999999999999985 445 33321100 011 1111246788888877532 222 22222
Q ss_pred hhh----cCeeEEEEEeeeeccccccccCCCCCCCccccccccceee---ccCCChhhhhhhhccc-CCCceeEEEEEce
Q 025368 156 HDK----FGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNII---PSSTGAAKAVGKVLPA-LNGKLTGMAFRVP 227 (254)
Q Consensus 156 ~~~----~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~---p~~~~~~~e~~~~l~~-~~~~v~~~~~~vP 227 (254)
.+. |.++ .+..+|. .+.|.||++....++.++.+.- .+...+.++ .+..+ -...+.++.+|.|
T Consensus 145 a~~l~~~~die--i~E~HH~-----~K~DaPSGTA~~la~~i~~~~~~~~~~~~~~~r~--g~~g~r~~~~i~i~s~R~g 215 (272)
T 4f3y_A 145 AKQFAQGYDIE--IIEAHHR-----HKVDAPSGTALMMGETIAAATGRSLDDCAVYGRH--GVTGERDPSTIGFSAIRGG 215 (272)
T ss_dssp HHHTSSSCEEE--EEEEECT-----TCCSSSCHHHHHHHHHHHHTTTCCHHHHEEECCC--SCCCSCCTTCEEEEEEECT
T ss_pred HHhcCcCCCEE--EEEecCC-----CCCCCCCHHHHHHHHHHHHHhCcccccccccccc--cccCCCCCCccCEEEEECC
Confidence 222 2333 2235555 3678888765544433332210 000000000 01111 0235788999999
Q ss_pred eCceeEEEEE
Q 025368 228 TVDVSVVDLT 237 (254)
Q Consensus 228 ~~rG~~~~~~ 237 (254)
-.-|+-..++
T Consensus 216 ~ivg~h~v~f 225 (272)
T 4f3y_A 216 DIVGDHTVLF 225 (272)
T ss_dssp TCCEEEEEEE
T ss_pred CCceEEEEEE
Confidence 8888665443
No 47
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.90 E-value=6.5e-09 Score=87.06 Aligned_cols=186 Identities=15% Similarity=0.129 Sum_probs=104.2
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
|+|+||+|+|+|.+|+.+++++.++++ +++++..+..+ . .. + +.++ .|.+++ .
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~~-----------~-~~-------g--v~v~--~dl~~l---~ 53 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTPK-----------A-TT-------P--YQQY--QHIADV---K 53 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSCC--------------C-------C--SCBC--SCTTTC---T
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCcc-----------c-cC-------C--Ccee--CCHHHH---h
Confidence 778999999999999999999999999 99887654210 0 00 1 2222 345555 3
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEe--cCCCCCCCeEEeeeCcccccCCCCeEEcCChhhHh--HHHHH---H
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNC--LAPLA---K 153 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi--S~~~~~~~~~v~~vn~~~i~~~~~iVa~p~C~~t~--~~l~l---~ 153 (254)
++|+|++++.+....+.++ +++|+. +|+ ++++++.- -++ +++.++..++-.||.+.-. +.-.+ +
T Consensus 54 -~~DVvIDft~p~a~~~~~~--l~~g~~-vVigTTG~s~e~~---~~l--~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa 124 (243)
T 3qy9_A 54 -GADVAIDFSNPNLLFPLLD--EDFHLP-LVVATTGEKEKLL---NKL--DELSQNMPVFFSANMSYGVHALTKILAAAV 124 (243)
T ss_dssp -TCSEEEECSCHHHHHHHHT--SCCCCC-EEECCCSSHHHHH---HHH--HHHTTTSEEEECSSCCHHHHHHHHHHHHHH
T ss_pred -CCCEEEEeCChHHHHHHHH--HhcCCc-eEeCCCCCCHHHH---HHH--HHHHhcCCEEEECCccHHHHHHHHHHHHHH
Confidence 7999999998877777776 778875 444 33321100 001 1111246788888877422 22222 2
Q ss_pred HHhhhcCeeEEEEEeeeeccccccccCCCCCCCccccccccce------eeccCCChhhhhhhhccc-CCCceeEEEEEc
Q 025368 154 VIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFN------IIPSSTGAAKAVGKVLPA-LNGKLTGMAFRV 226 (254)
Q Consensus 154 pL~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n------~~p~~~~~~~e~~~~l~~-~~~~v~~~~~~v 226 (254)
.++..+.++- +...|. .+.|.||++....++.+ .+ ....+++ ...+ -...+.++.+|.
T Consensus 125 ~~l~~~dieI--~E~HH~-----~K~DaPSGTA~~la~~i-~~~~~~~~~~~~r~~-------~~~~r~~~~i~i~s~R~ 189 (243)
T 3qy9_A 125 PLLDDFDIEL--TEAHHN-----KKVDAPSGTLEKLYDVI-VSLKENVTPVYDRHE-------LNEKRQPQDIGIHSIRG 189 (243)
T ss_dssp HHTTTSEEEE--EEEECT-----TCCSSSCHHHHHHHHHH-HHHSTTCEEECCCTT-------TCCCCCTTEEEEEEEEC
T ss_pred HhcCCCCEEE--EEcCCC-----CCCCCCCHHHHHHHHHH-HhcCccccccccccc-------ccCCccCCcceEEEEEC
Confidence 2222234442 235555 36788887654444332 21 1111111 0011 123578899999
Q ss_pred eeCceeEEEEE
Q 025368 227 PTVDVSVVDLT 237 (254)
Q Consensus 227 P~~rG~~~~~~ 237 (254)
|-.-|+-..++
T Consensus 190 g~ivg~h~v~f 200 (243)
T 3qy9_A 190 GTIVGEHEVLF 200 (243)
T ss_dssp TTCCEEEEEEE
T ss_pred CCCcEEEEEEE
Confidence 98888665443
No 48
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=98.75 E-value=5.6e-08 Score=82.79 Aligned_cols=204 Identities=19% Similarity=0.221 Sum_probs=109.3
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|.++||+|+|+ |++|+.+++.+.++|+++++++.....+...|+-. +.. .| +....+.+. .+.+++
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~-~~~---~g----~~~~~v~~~--~dl~~~--- 69 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDA-GEL---AG----AGKTGVTVQ--SSLDAV--- 69 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCT-TCS---SS----SSCCSCCEE--SCSTTT---
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhH-HHH---cC----CCcCCceec--CCHHHH---
Confidence 34589999999 99999999999999999998876542111011110 000 00 000012232 344444
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe--cCCCCCCCeEEeeeCcccccCCCCeEEcCChhh--HhHHHHHH--
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAPSKDAPMFVVGVNENEYKPELNIVSNASCTT--NCLAPLAK-- 153 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi--S~~~~~~~~~v~~vn~~~i~~~~~iVa~p~C~~--t~~~l~l~-- 153 (254)
..++|+|++++.+....+.+..++++|++ +|+ ++++.+. ..++ .++.++..++-.||-+. +.+.-.+.
T Consensus 70 l~~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTtG~~~e~---~~~L--~~~a~~~~vv~a~N~siGvn~~~~l~~~a 143 (273)
T 1dih_A 70 KDDFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTTGFDEAG---KQAI--RDAAADIAIVFAANFSVGVNVMLKLLEKA 143 (273)
T ss_dssp TTSCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCCCCCHHH---HHHH--HHHTTTSCEEECSCCCHHHHHHHHHHHHH
T ss_pred hcCCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECCCCCHHH---HHHH--HHhcCCCCEEEEecCcHHHHHHHHHHHHH
Confidence 35799999999988889999999999985 445 2222110 0001 11112356777776443 22221222
Q ss_pred -HHh-hhcCeeEEEEEeeeeccccccccCCCCCCCccccccccceee-------cc-CCChhhhhhhhccc-CCCceeEE
Q 025368 154 -VIH-DKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNII-------PS-STGAAKAVGKVLPA-LNGKLTGM 222 (254)
Q Consensus 154 -pL~-~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~-------p~-~~~~~~e~~~~l~~-~~~~v~~~ 222 (254)
..+ +.|.|+- +..+|. .+.|.||++....++.++.+.- .+ .++. ..+ -...+.++
T Consensus 144 a~~~~~~~diei--iE~Hh~-----~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~-------~~~r~~~~i~i~ 209 (273)
T 1dih_A 144 AKVMGDYTDIEI--IEAHHR-----HKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGH-------TGERVPGTIGFA 209 (273)
T ss_dssp HHHHTTTSEEEE--EEEECT-----TCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSC-------CCSCCTTCEEEE
T ss_pred HHhcCCCCCEEE--EEeecC-----CCCCCCCHHHHHHHHHHHHhhCCCccccccccccCc-------cCCCCCCcceEE
Confidence 222 2334442 235555 3578888655444433322110 01 0111 011 01357889
Q ss_pred EEEceeCceeEEEEE
Q 025368 223 AFRVPTVDVSVVDLT 237 (254)
Q Consensus 223 ~~~vP~~rG~~~~~~ 237 (254)
.+|.|-..|+-..+.
T Consensus 210 s~R~g~vvg~h~v~f 224 (273)
T 1dih_A 210 TVRAGDIVGEHTAMF 224 (273)
T ss_dssp EEECTTCCEEEEEEE
T ss_pred EEeCCCCCccEEEEE
Confidence 999999999766444
No 49
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=98.67 E-value=6.5e-09 Score=88.96 Aligned_cols=207 Identities=22% Similarity=0.132 Sum_probs=113.9
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
|+||+|+|+ |.+|+.+++.+.++|+++++++..+...+..|+-. +++ .| +....+.++ .|.+++ ..
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~-gel---~G----~~~~gv~v~--~dl~~l---l~ 87 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDA-SIL---IG----SDFLGVRIT--DDPESA---FS 87 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBG-GGG---TT----CSCCSCBCB--SCHHHH---TT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccch-HHh---hc----cCcCCceee--CCHHHH---hc
Confidence 589999997 99999999999999999999987653211123211 110 11 000113332 344443 35
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCCCeEEe--cCCCCCCCeEEeeeCcccccCCCCeEEcCChhhHh-H-HHHHHHHhh
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNC-L-APLAKVIHD 157 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi--S~~~~~~~~~v~~vn~~~i~~~~~iVa~p~C~~t~-~-~l~l~pL~~ 157 (254)
++|+|++++++....+.+..++++|++ +|+ ++++++.. .++. +..+ +..++-.||.+.-. + .-.+.-+.+
T Consensus 88 ~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vViGTTG~~~e~~---~~L~-~aa~-~~~~~~a~N~SiGv~ll~~l~~~aa~ 161 (288)
T 3ijp_A 88 NTEGILDFSQPQASVLYANYAAQKSLI-HIIGTTGFSKTEE---AQIA-DFAK-YTTIVKSGNMSLGVNLLANLVKRAAK 161 (288)
T ss_dssp SCSEEEECSCHHHHHHHHHHHHHHTCE-EEECCCCCCHHHH---HHHH-HHHT-TSEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEECCCCCHHHH---HHHH-HHhC-cCCEEEECCCcHHHHHHHHHHHHHHH
Confidence 799999999999889999999999985 444 33322110 0111 1122 46788888877433 2 112222222
Q ss_pred ----hcCeeEEEEEeeeeccccccccCCCCCCCccccccccceee-ccC--CChhhhhhhhccc-CCCceeEEEEEceeC
Q 025368 158 ----KFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNII-PSS--TGAAKAVGKVLPA-LNGKLTGMAFRVPTV 229 (254)
Q Consensus 158 ----~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~-p~~--~~~~~e~~~~l~~-~~~~v~~~~~~vP~~ 229 (254)
.|.++- +...|. .+.|.||++....++.++.+.- .+. ..+.++ .+..+ -...+.++.+|.|-.
T Consensus 162 ~l~~~~dieI--iE~HH~-----~K~DaPSGTA~~la~~i~~~~~~~~~~~~~~~r~--g~~g~r~~~~i~i~s~R~g~i 232 (288)
T 3ijp_A 162 ALDDDFDIEI--YEMHHA-----NKVDSPSGTALLLGQAAAEGRNIMLKNVSVNGRS--GHTGKREKGTIGFACSRGGTV 232 (288)
T ss_dssp HSCTTSEEEE--EEEECT-----TCCCSSCHHHHHHHHHHHHHTTSCHHHHEEECGG--GCCSCCCTTCEEEEEEECTTC
T ss_pred hcCCCCCEEE--EEccCC-----CCCCCCCHHHHHHHHHHHHHhCCCcccccccccc--cccCCcCCCCccEEEEECCCC
Confidence 233442 234555 3678888765544433332210 000 000011 01111 123588899999988
Q ss_pred ceeEEEEE
Q 025368 230 DVSVVDLT 237 (254)
Q Consensus 230 rG~~~~~~ 237 (254)
-|+-..++
T Consensus 233 vg~h~V~f 240 (288)
T 3ijp_A 233 IGDHSITF 240 (288)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEe
Confidence 88654443
No 50
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=98.51 E-value=6.1e-07 Score=75.10 Aligned_cols=184 Identities=15% Similarity=0.150 Sum_probs=101.4
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
|||+|+|+ |.+|+.+++.+.++|+++++++.... .+++++. ..+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------------------------~dl~~~~--~~~ 45 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------------------------DPLSLLT--DGN 45 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------------------------CCTHHHH--HTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------------------------CCHHHHh--ccC
Confidence 49999999 99999999999989899988764210 0111110 125
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCCCeEEe--cCCCCCCCeEEeeeCccccc-C-CCCeEEcCChhh--HhHHHHHHHHh
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAPSKDAPMFVVGVNENEYK-P-ELNIVSNASCTT--NCLAPLAKVIH 156 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi--S~~~~~~~~~v~~vn~~~i~-~-~~~iVa~p~C~~--t~~~l~l~pL~ 156 (254)
+|+|+|++++....+++..++++|++ +|+ ++++.+.. ..+. +..+ . +..++-.||-+. +.+.-.+.-+.
T Consensus 46 ~DvvIDfT~p~a~~~~~~~a~~~g~~-~VigTTG~~~e~~---~~l~-~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa 120 (245)
T 1p9l_A 46 TEVVIDFTHPDVVMGNLEFLIDNGIH-AVVGTTGFTAERF---QQVE-SWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAA 120 (245)
T ss_dssp CCEEEECSCTTTHHHHHHHHHHTTCE-EEECCCCCCHHHH---HHHH-HHHHTSTTCEEEECSCCCHHHHHHHHHHHHHG
T ss_pred CcEEEEccChHHHHHHHHHHHHcCCC-EEEcCCCCCHHHH---HHHH-HHHHhCCCCCEEEECCccHHHHHHHHHHHHHH
Confidence 89999999999999999999999985 444 33321100 0010 1111 0 245666666543 22222233333
Q ss_pred hhcCeeEEEEE-eeeeccccccccCCCCCCCccccccccceee--ccCCChhhhhhhhcccC---CCceeEEEEEceeCc
Q 025368 157 DKFGIVEGLMT-TVHSITATQKTVDGPSSKDWRGGRAASFNII--PSSTGAAKAVGKVLPAL---NGKLTGMAFRVPTVD 230 (254)
Q Consensus 157 ~~~~i~~~~v~-~~~~~sg~~~~~d~~~~~~~~~~~~~~~n~~--p~~~~~~~e~~~~l~~~---~~~v~~~~~~vP~~r 230 (254)
+.+ .+..|+ .+|. .+.|.||++....++.++.+.- .......++ .+...- ...+.++++|.|-.-
T Consensus 121 ~~~--~dieIiE~HH~-----~K~DaPSGTA~~lae~i~~~~~~~~~~~~~~~~--~~~g~r~~~~~~i~i~s~R~g~iv 191 (245)
T 1p9l_A 121 RFF--DSAEVIELHHP-----HKADAPSGTAARTAKLIAEARKGLPPNPDATST--SLPGARGADVDGIPVHAVRLAGLV 191 (245)
T ss_dssp GGC--SEEEEEEEECT-----TCCSSSCHHHHHHHHHHHHHTTTSCCCCCCCCS--CCTTTTCEEETTEEEEEEECTTCC
T ss_pred hhc--CCEEEEECccc-----CCCCCCCHHHHHHHHHHHHhhcccccccccccc--cccCCCCCCCCcceEEEEECCCCC
Confidence 333 233333 4555 3678888765544433322110 000000000 000000 125788999999999
Q ss_pred eeEEEE
Q 025368 231 VSVVDL 236 (254)
Q Consensus 231 G~~~~~ 236 (254)
|+-..+
T Consensus 192 g~h~V~ 197 (245)
T 1p9l_A 192 AHQEVL 197 (245)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 875444
No 51
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.44 E-value=5.9e-07 Score=78.17 Aligned_cols=88 Identities=19% Similarity=0.310 Sum_probs=64.7
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
|+++||+|+|+|++|+.+++.|.++|+++++++.....+. + . . .+ +..+ .|.+++ .
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~---~---------~--~---~g--v~~~--~d~~~l---l 56 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL---D---------T--K---TP--VFDV--ADVDKH---A 56 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC---S---------S--S---SC--EEEG--GGGGGT---T
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH---h---------h--c---CC--Ccee--CCHHHH---h
Confidence 8889999999999999999999999999999887542110 0 0 0 12 3332 233444 2
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEec
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 113 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS 113 (254)
.++|+||+|+|+....+.+..++++|+. ++++
T Consensus 57 ~~~DvViiatp~~~h~~~~~~al~aG~~-Vv~e 88 (320)
T 1f06_A 57 DDVDVLFLCMGSATDIPEQAPKFAQFAC-TVDT 88 (320)
T ss_dssp TTCSEEEECSCTTTHHHHHHHHHTTTSE-EECC
T ss_pred cCCCEEEEcCCcHHHHHHHHHHHHCCCE-EEEC
Confidence 5799999999998888889999999973 4443
No 52
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.43 E-value=2.2e-07 Score=80.33 Aligned_cols=84 Identities=19% Similarity=0.254 Sum_probs=58.8
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
|+++||||+|+|.+|+.+++.|.++|++++++++....+. .. . . |.....+ .+..+.
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~---------~~-----~--~-g~~~~~~--~~l~~~---- 63 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAE---------VP-----F--E-LQPFRVV--SDIEQL---- 63 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-----------------------C-CTTSCEE--SSGGGS----
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHH---------HH-----H--c-CCCcCCH--HHHHhC----
Confidence 4468999999999999999999999999999887542110 00 0 0 1001111 122221
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCC
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
.++|+||.|+|+....+.+..++++|+
T Consensus 64 ~~~DvViiatp~~~h~~~~~~al~aG~ 90 (304)
T 3bio_A 64 ESVDVALVCSPSREVERTALEILKKGI 90 (304)
T ss_dssp SSCCEEEECSCHHHHHHHHHHHHTTTC
T ss_pred CCCCEEEECCCchhhHHHHHHHHHcCC
Confidence 479999999999999999999999997
No 53
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=98.26 E-value=3e-06 Score=73.99 Aligned_cols=84 Identities=19% Similarity=0.268 Sum_probs=60.0
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCC--------CceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCC
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRD--------DVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 72 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p--------~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~ 72 (254)
|+++||||+|+|.+|+.+++.|.+++ +++++++..+..+ + ..+ + .. . ..+ .|
T Consensus 1 Mk~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~----~--------~~~--~--~~-~-~~~--~d 60 (332)
T 2ejw_A 1 MEALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPR----K--------PRA--I--PQ-E-LLR--AE 60 (332)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTT----S--------CCS--S--CG-G-GEE--SS
T ss_pred CCeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHH----H--------hhc--c--Cc-c-ccc--CC
Confidence 77799999999999999999999887 6788887654311 0 001 1 00 0 111 35
Q ss_pred CCCCCcccCCCcEEEEecCCc-cCHHHHHHHHHCCCC
Q 025368 73 PEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAK 108 (254)
Q Consensus 73 ~~~~~~~~~~~Dvv~~a~~~~-~s~~~~~~~~~~G~~ 108 (254)
.+++ . ++|+|++|+|+. ...+++.+++++|+.
T Consensus 61 ~~~l---l-~iDvVve~t~~~~~a~~~~~~AL~aGKh 93 (332)
T 2ejw_A 61 PFDL---L-EADLVVEAMGGVEAPLRLVLPALEAGIP 93 (332)
T ss_dssp CCCC---T-TCSEEEECCCCSHHHHHHHHHHHHTTCC
T ss_pred HHHH---h-CCCEEEECCCCcHHHHHHHHHHHHcCCe
Confidence 6666 3 799999999987 456788889999973
No 54
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.24 E-value=2.7e-07 Score=79.55 Aligned_cols=91 Identities=15% Similarity=0.274 Sum_probs=63.0
Q ss_pred CCCcEEEEEccCHHHHH-HHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~-l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|+++||||+|+|.+|+. +++.|.++|++++++++....+. ...+ .. . + + +..+ .+.+++
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~-----a~----~--~-~--~~~~--~~~~~l--- 63 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVK-REKI-----CS----D--Y-R--IMPF--DSIESL--- 63 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHH-HHHH-----HH----H--H-T--CCBC--SCHHHH---
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHH-HHHH-----HH----H--c-C--CCCc--CCHHHH---
Confidence 66789999999999996 99999999999999987653211 0000 00 0 0 1 1111 233333
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
.+++|+|+.|+|+....+.+..++++|+. +++
T Consensus 64 l~~~D~V~i~tp~~~h~~~~~~al~~gk~-vl~ 95 (308)
T 3uuw_A 64 AKKCDCIFLHSSTETHYEIIKILLNLGVH-VYV 95 (308)
T ss_dssp HTTCSEEEECCCGGGHHHHHHHHHHTTCE-EEE
T ss_pred HhcCCEEEEeCCcHhHHHHHHHHHHCCCc-EEE
Confidence 24799999999999999999999999973 444
No 55
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.23 E-value=1.1e-06 Score=77.46 Aligned_cols=91 Identities=21% Similarity=0.316 Sum_probs=63.5
Q ss_pred CCCcEEEEEccCHHHHH-HHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~-l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|.|+||||+|+|.+|+. .++.|.++|+++++++.....+. . . . . +++ ...+ .|.+++- .
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~----~-----~--~--~--~~~--~~~~--~~~~~ll-~ 62 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL----S-----K--E--R--YPQ--ASIV--RSFKELT-E 62 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG----G-----G--T--T--CTT--SEEE--SCSHHHH-T
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH----H-----H--H--h--CCC--CceE--CCHHHHh-c
Confidence 34689999999999997 78899999999999987653211 1 0 0 0 111 2233 2344431 1
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
..++|+|+.|+|+....+++..++++|+ .+++
T Consensus 63 ~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 94 (362)
T 3fhl_A 63 DPEIDLIVVNTPDNTHYEYAGMALEAGK-NVVV 94 (362)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEE
Confidence 1359999999999999999999999996 3444
No 56
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.22 E-value=8.5e-07 Score=78.20 Aligned_cols=91 Identities=21% Similarity=0.352 Sum_probs=63.5
Q ss_pred CCCcEEEEEccCHHHHH-HHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~-l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|.++||||+|+|.+|+. .++.+.++|+++++++.....+. . ... +.+ ...+ .|.+++- .
T Consensus 3 m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~----~-----~~~------~~~--~~~~--~~~~~ll-~ 62 (358)
T 3gdo_A 3 LDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEE----V-----KRD------FPD--AEVV--HELEEIT-N 62 (358)
T ss_dssp TTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHH----H-----HHH------CTT--SEEE--SSTHHHH-T
T ss_pred CCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH----H-----Hhh------CCC--CceE--CCHHHHh-c
Confidence 34689999999999997 78889999999999987653211 0 000 011 2233 2344331 1
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
..++|+|+.|+|+....+++..++++|+ .+++
T Consensus 63 ~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 94 (358)
T 3gdo_A 63 DPAIELVIVTTPSGLHYEHTMACIQAGK-HVVM 94 (358)
T ss_dssp CTTCCEEEECSCTTTHHHHHHHHHHTTC-EEEE
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHcCC-eEEE
Confidence 1369999999999999999999999996 3444
No 57
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.22 E-value=7.8e-07 Score=77.47 Aligned_cols=94 Identities=16% Similarity=0.214 Sum_probs=62.1
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
|+|+||||+|+|.+|+..++.|.++++++++++..+..+. ..++ . . . + +. ...+ .+.+++- ..
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~-~~~~-----a--~--~--~-~~-~~~~--~~~~~ll-~~ 65 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLES-AQAF-----A--N--K--Y-HL-PKAY--DKLEDML-AD 65 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSST-TCC------------C--C-CC-SCEE--SCHHHHH-TC
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHH-HHHH-----H--H--H--c-CC-Cccc--CCHHHHh-cC
Confidence 3468999999999999999999999999999987653211 0000 0 0 0 0 10 0122 2333331 11
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
.++|+|+.|+|+....+.+..++++|+. +++
T Consensus 66 ~~~D~V~i~tp~~~h~~~~~~al~aGk~-Vl~ 96 (329)
T 3evn_A 66 ESIDVIYVATINQDHYKVAKAALLAGKH-VLV 96 (329)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTCE-EEE
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCCCe-EEE
Confidence 3689999999999999999999999973 444
No 58
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.19 E-value=1.3e-06 Score=76.47 Aligned_cols=93 Identities=22% Similarity=0.258 Sum_probs=63.1
Q ss_pred CC-CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~-~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|+ |+||||+|+|.+|+..++.|.++|++++++++.+..+. ...+ . .. + + ...+ .+.+++- .
T Consensus 1 M~~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~-~~~~-----a-~~-----~-g--~~~~--~~~~~~l-~ 62 (344)
T 3euw_A 1 MSLTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEG-AQRL-----A-EA-----N-G--AEAV--ASPDEVF-A 62 (344)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHH-HHHH-----H-HT-----T-T--CEEE--SSHHHHT-T
T ss_pred CCCceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHH-HHHH-----H-HH-----c-C--Ccee--CCHHHHh-c
Confidence 54 58999999999999999999999999999887653211 0000 0 00 0 1 2222 2333331 1
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
..++|+|+.|+|+....+.+..++++|+. +++
T Consensus 63 ~~~~D~V~i~tp~~~h~~~~~~al~~gk~-v~~ 94 (344)
T 3euw_A 63 RDDIDGIVIGSPTSTHVDLITRAVERGIP-ALC 94 (344)
T ss_dssp CSCCCEEEECSCGGGHHHHHHHHHHTTCC-EEE
T ss_pred CCCCCEEEEeCCchhhHHHHHHHHHcCCc-EEE
Confidence 13799999999999999999999999964 444
No 59
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=98.18 E-value=1.2e-06 Score=76.39 Aligned_cols=86 Identities=21% Similarity=0.212 Sum_probs=63.0
Q ss_pred CCCcEEEEEccCHHHH-HHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~-~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|+++||||+|+|.+|+ ..++.|.++|+++++++.....+ .. + ++.+ .+.+++- .
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~-------------~~-------g--~~~~--~~~~~ll-~ 77 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGT-------------VE-------G--VNSY--TTIEAML-D 77 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCC-------------CT-------T--SEEE--SSHHHHH-H
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChh-------------hc-------C--CCcc--CCHHHHH-h
Confidence 5678999999999998 79999999999999998754210 01 1 2222 2333331 1
Q ss_pred c-CCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 80 E-TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 80 ~-~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
. .++|+|+.|+|+....+++.+++++|+ .+++
T Consensus 78 ~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 110 (330)
T 4ew6_A 78 AEPSIDAVSLCMPPQYRYEAAYKALVAGK-HVFL 110 (330)
T ss_dssp HCTTCCEEEECSCHHHHHHHHHHHHHTTC-EEEE
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHcCC-cEEE
Confidence 1 368999999999999999999999996 3444
No 60
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.14 E-value=8.6e-07 Score=77.95 Aligned_cols=93 Identities=12% Similarity=0.165 Sum_probs=62.8
Q ss_pred CCCcEEEEEccCHHHH-HHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~-~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|.++||||+|+|.+|+ ..++.|.++|+++++++.....+. ...+ . . . + | +..+ .+.+++- .
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~-----a--~--~--~-g--~~~~--~~~~~ll-~ 86 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDR-AKRF-----T--E--R--F-G--GEPV--EGYPALL-E 86 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHH-HHHH-----H--H--H--H-C--SEEE--ESHHHHH-T
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHH-HHHH-----H--H--H--c-C--CCCc--CCHHHHh-c
Confidence 5678999999999998 799999999999999987653211 0000 0 0 0 0 1 1222 1233330 1
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
..++|+|+.|+|+....+.+..++++|+. +++
T Consensus 87 ~~~~D~V~i~tp~~~h~~~~~~al~aGk~-Vl~ 118 (350)
T 3rc1_A 87 RDDVDAVYVPLPAVLHAEWIDRALRAGKH-VLA 118 (350)
T ss_dssp CTTCSEEEECCCGGGHHHHHHHHHHTTCE-EEE
T ss_pred CCCCCEEEECCCcHHHHHHHHHHHHCCCc-EEE
Confidence 13689999999999999999999999973 444
No 61
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.12 E-value=1.3e-06 Score=77.18 Aligned_cols=92 Identities=17% Similarity=0.299 Sum_probs=63.3
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
|+++||||+|+|.+|+..++.|.++|+++++++.....+.. +. .... | +..+ .|.+++ ...
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~--~~-----a~~~-------g--~~~~--~~~~~l-l~~ 63 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKR--EA-----AAQK-------G--LKIY--ESYEAV-LAD 63 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHH--HH-----HHTT-------T--CCBC--SCHHHH-HHC
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHH--HH-----HHhc-------C--Ccee--CCHHHH-hcC
Confidence 34589999999999999999999999999999876532110 00 0001 1 1222 233333 111
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
.++|+|+.|+|+....+++..++++|+. +++
T Consensus 64 ~~~D~V~i~tp~~~h~~~~~~al~aGkh-Vl~ 94 (359)
T 3e18_A 64 EKVDAVLIATPNDSHKELAISALEAGKH-VVC 94 (359)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTCE-EEE
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHCCCC-EEe
Confidence 3789999999999999999999999963 444
No 62
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.12 E-value=2.3e-06 Score=75.19 Aligned_cols=91 Identities=23% Similarity=0.363 Sum_probs=63.2
Q ss_pred CC-CcEEEEEccCHHHHH-HHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCc
Q 025368 1 MG-KVKIGINGFGRIGRL-VARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPW 78 (254)
Q Consensus 1 M~-~~~V~IvG~G~~G~~-l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 78 (254)
|+ ++||||+|+|.+|+. .++.+.++|+++++++.....+.. . .. +.+ ..++ .|.+++-
T Consensus 4 M~~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~---------~--~~----~~~--~~~~--~~~~~ll- 63 (352)
T 3kux_A 4 MADKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKV---------H--AD----WPA--IPVV--SDPQMLF- 63 (352)
T ss_dssp TTCCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHH---------H--TT----CSS--CCEE--SCHHHHH-
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHH---------H--hh----CCC--CceE--CCHHHHh-
Confidence 54 589999999999997 889999999999999876532110 0 00 011 1222 2333331
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
...++|+|+.|+|+....+++..++++|+ .+++
T Consensus 64 ~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hV~~ 96 (352)
T 3kux_A 64 NDPSIDLIVIPTPNDTHFPLAQSALAAGK-HVVV 96 (352)
T ss_dssp HCSSCCEEEECSCTTTHHHHHHHHHHTTC-EEEE
T ss_pred cCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEE
Confidence 11369999999999999999999999996 3444
No 63
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.11 E-value=7.7e-07 Score=77.59 Aligned_cols=94 Identities=13% Similarity=0.104 Sum_probs=63.2
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
|+++||||+|+|.+|+..++.|.++|+++++++.....+. ...+ ...- +. ...+ .+.+++- ..
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~-~~~~-----~~~~-------~~-~~~~--~~~~~ll-~~ 65 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLEN-AQKM-----AKEL-------AI-PVAY--GSYEELC-KD 65 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHH-HHHH-----HHHT-------TC-CCCB--SSHHHHH-HC
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHH-HHHH-----HHHc-------CC-Ccee--CCHHHHh-cC
Confidence 4468999999999999999999999999999887653211 0000 0000 10 0111 2233330 11
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
.++|+|+.|+|+....+.+..++++|+. +++
T Consensus 66 ~~~D~V~i~tp~~~h~~~~~~al~~gk~-vl~ 96 (330)
T 3e9m_A 66 ETIDIIYIPTYNQGHYSAAKLALSQGKP-VLL 96 (330)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHHHTTCC-EEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHHCCCe-EEE
Confidence 3689999999999999999999999964 444
No 64
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.10 E-value=1.1e-06 Score=77.53 Aligned_cols=95 Identities=20% Similarity=0.186 Sum_probs=63.4
Q ss_pred CCCcEEEEEccCHHHHHHHHHHH-cCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGFGRIGRLVARVIL-QRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~-~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|+++||||+|+|.+|+..++.|. ++|+++++++.....+. ..++. . . + +.....+ .+.+++- .
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~-~~~~a----~-----~--~-g~~~~~~--~~~~~ll-~ 84 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGR-AQAAL----D-----K--Y-AIEAKDY--NDYHDLI-N 84 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTH-HHHHH----H-----H--H-TCCCEEE--SSHHHHH-H
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHH-HHHHH----H-----H--h-CCCCeee--CCHHHHh-c
Confidence 67789999999999999999998 78999999987653111 00000 0 0 0 1002222 2333331 1
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
..++|+|+.|+|+....+.+..++++|+ .+++
T Consensus 85 ~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~ 116 (357)
T 3ec7_A 85 DKDVEVVIITASNEAHADVAVAALNANK-YVFC 116 (357)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHCCC-CEEe
Confidence 1368999999999999999999999996 3444
No 65
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.09 E-value=9.9e-07 Score=77.57 Aligned_cols=92 Identities=16% Similarity=0.224 Sum_probs=62.7
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
+++||||+|+|.+|+..++.|.++|++++++++....+. ...+. . .. + +..+ .+.+++- ...
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~-~~~~~----~-----~~---g--~~~~--~~~~~~l-~~~ 65 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDK-REKFG----K-----RY---N--CAGD--ATMEALL-ARE 65 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHH-HHHHH----H-----HH---T--CCCC--SSHHHHH-HCS
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHH-HHHHH----H-----Hc---C--CCCc--CCHHHHh-cCC
Confidence 458999999999999999999999999999887653211 00000 0 00 1 1111 2333330 114
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
++|+|+.|+|+....+.+..++++|+. +++
T Consensus 66 ~~D~V~i~tp~~~h~~~~~~al~~gk~-vl~ 95 (354)
T 3db2_A 66 DVEMVIITVPNDKHAEVIEQCARSGKH-IYV 95 (354)
T ss_dssp SCCEEEECSCTTSHHHHHHHHHHTTCE-EEE
T ss_pred CCCEEEEeCChHHHHHHHHHHHHcCCE-EEE
Confidence 689999999999999999999999963 444
No 66
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.07 E-value=1.8e-06 Score=75.18 Aligned_cols=91 Identities=23% Similarity=0.226 Sum_probs=62.4
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
||+||||+|+|.+|+..++.|.++|++++++++....+. ..++ ...- + +. + .+.+++- ...
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~-~~~~-----~~~~-------~--~~-~--~~~~~~l-~~~ 62 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAA-AEAI-----AGAY-------G--CE-V--RTIDAIE-AAA 62 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHH-HHHH-----HHHT-------T--CE-E--CCHHHHH-HCT
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHH-HHHH-----HHHh-------C--CC-c--CCHHHHh-cCC
Confidence 358999999999999999999999999999887653211 0000 0000 1 12 2 2333331 113
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
++|+|+.|+|+....+.+..++++|+ .+++
T Consensus 63 ~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~ 92 (331)
T 4hkt_A 63 DIDAVVICTPTDTHADLIERFARAGK-AIFC 92 (331)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCEEEEeCCchhHHHHHHHHHHcCC-cEEE
Confidence 79999999999999999999999996 3444
No 67
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.05 E-value=3e-06 Score=74.88 Aligned_cols=85 Identities=22% Similarity=0.276 Sum_probs=60.2
Q ss_pred CcEEEEEccCHHHHH-HHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGFGRIGRL-VARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~-l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
|+||||+|+|.+|+. .++.+.++|+++++++.....+. . ... +.+ ...+ .|.+++- ...
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~----~-----~~~------~~~--~~~~--~~~~~ll-~~~ 66 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEK----V-----KRD------LPD--VTVI--ASPEAAV-QHP 66 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHH----H-----HHH------CTT--SEEE--SCHHHHH-TCT
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH----H-----Hhh------CCC--CcEE--CCHHHHh-cCC
Confidence 589999999999997 88899999999999987653211 0 000 011 1222 2333331 113
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCC
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
++|+|+.|+|+....+++..++++|+
T Consensus 67 ~~D~V~i~tp~~~H~~~~~~al~aGk 92 (364)
T 3e82_A 67 DVDLVVIASPNATHAPLARLALNAGK 92 (364)
T ss_dssp TCSEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCCC
Confidence 68999999999999999999999996
No 68
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.05 E-value=2e-06 Score=75.90 Aligned_cols=90 Identities=16% Similarity=0.221 Sum_probs=61.5
Q ss_pred CCCcEEEEEccCHHHHH-HHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~-l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|+++||||+|+|.+|+. .++.|.++|++++++++....+. ...+. . . +++ ...+ .+.+++- .
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~a------~---~--~~~--~~~~--~~~~~ll-~ 65 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLER-ARRVH------R---F--ISD--IPVL--DNVPAML-N 65 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHH-HGGGG------G---T--SCS--CCEE--SSHHHHH-H
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHH-HHHHH------H---h--cCC--Cccc--CCHHHHh-c
Confidence 44589999999999996 89999999999999987653211 01110 0 0 011 1222 2333331 1
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCC
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
..++|+|+.|+|+....+++..++++|+
T Consensus 66 ~~~vD~V~i~tp~~~H~~~~~~al~aGk 93 (359)
T 3m2t_A 66 QVPLDAVVMAGPPQLHFEMGLLAMSKGV 93 (359)
T ss_dssp HSCCSEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHCCC
Confidence 1368999999999999999999999997
No 69
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.03 E-value=2.1e-06 Score=75.14 Aligned_cols=93 Identities=18% Similarity=0.187 Sum_probs=62.9
Q ss_pred CCcEEEEEccCHHHHH-HHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~-l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
+|+||||||+|.+|+. .++.+.++|+++++++.....+. ...+ . . . ++. ...+ .|.+++ ...
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~-a~~~-----a--~--~--~g~--~~~y--~d~~el-l~~ 84 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTR-AREM-----A--D--R--FSV--PHAF--GSYEEM-LAS 84 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHH-HHHH-----H--H--H--HTC--SEEE--SSHHHH-HHC
T ss_pred CccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHH-HHHH-----H--H--H--cCC--Ceee--CCHHHH-hcC
Confidence 4789999999999985 68899999999999987653211 0000 0 0 0 111 1222 233333 112
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
.++|+|+-|||+....+++.+++++|+ .|.+
T Consensus 85 ~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~ 115 (350)
T 4had_A 85 DVIDAVYIPLPTSQHIEWSIKAADAGK-HVVC 115 (350)
T ss_dssp SSCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCCEEEEeCCCchhHHHHHHHHhcCC-EEEE
Confidence 468999999999999999999999997 3444
No 70
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.03 E-value=1.5e-06 Score=76.08 Aligned_cols=92 Identities=23% Similarity=0.337 Sum_probs=62.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
|+||||+|+|.+|+..++.|.++|++++++++....+. ...+ . . . + +. ...+ .+.+++- ...+
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~-~~~~-----~-~---~--~-~~-~~~~--~~~~~ll-~~~~ 64 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDR-LREM-----K-E---K--L-GV-EKAY--KDPHELI-EDPN 64 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHH-HHHH-----H-H---H--H-TC-SEEE--SSHHHHH-HCTT
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHH-HHHH-----H-H---H--h-CC-Ccee--CCHHHHh-cCCC
Confidence 58999999999999999999999999999987653211 0000 0 0 0 0 10 1122 2333331 1137
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
+|+|+.|+|+....+.+..++++|+. +++
T Consensus 65 ~D~V~i~tp~~~h~~~~~~al~~gk~-v~~ 93 (344)
T 3ezy_A 65 VDAVLVCSSTNTHSELVIACAKAKKH-VFC 93 (344)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCE-EEE
T ss_pred CCEEEEcCCCcchHHHHHHHHhcCCe-EEE
Confidence 99999999999999999999999963 444
No 71
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=98.02 E-value=1.4e-05 Score=69.63 Aligned_cols=98 Identities=19% Similarity=0.245 Sum_probs=59.0
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcC------CCceeEEeeeeeeccccc------cccccceeecCCeeEEECCEEEEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQR------DDVELVATYMFKYDSVHG------QWKHHELKVKDDKTLLFGEKPVTVF 68 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~------p~~~v~~~~~~~~~s~~g------~~~~~~v~~~~g~~l~~~~~~~~~~ 68 (254)
|+++||+|+|+|.+|+.+++.|.++ ++++++++..+.... .. ++. .. ....+ .+ .. . .+
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~-~~~~idl~~~~-~~-~~~~g-~~--~~--~-~~ 72 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYA-SGRNLDISSII-SN-KEKTG-RI--SD--R-AF 72 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEE-ECSSCCHHHHH-HH-HHHHS-CS--CS--S-BC
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhh-cccccCHHHHH-HH-hhhcC-CC--Cc--c-cC
Confidence 7789999999999999999999876 688999887543110 00 000 00 00000 00 00 0 00
Q ss_pred ecCCCCCCCcccCCCcEEEEecCCccC----HHHHHHHHHCCCCeEEec
Q 025368 69 GVRNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVIIS 113 (254)
Q Consensus 69 ~~~~~~~~~~~~~~~Dvv~~a~~~~~s----~~~~~~~~~~G~~~~viS 113 (254)
+.+++ ....++|+|++|+|+... .+++..++++|+ -|++
T Consensus 73 ---d~~e~-l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGk--hVVt 115 (325)
T 3ing_A 73 ---SGPED-LMGEAADLLVDCTPASRDGVREYSLYRMAFESGM--NVVT 115 (325)
T ss_dssp ---CSGGG-GTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTC--EEEE
T ss_pred ---CHHHH-hcCCCCCEEEECCCCccccchHHHHHHHHHHCCC--eEEE
Confidence 22222 012468999999998543 578899999998 4443
No 72
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.01 E-value=6.1e-06 Score=72.25 Aligned_cols=91 Identities=14% Similarity=0.239 Sum_probs=61.9
Q ss_pred CcEEEEEccCHHHHH-HHH-HHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 3 KVKIGINGFGRIGRL-VAR-VILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~-l~~-~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
|+||||+|+|.+|+. .++ ++..+|++++++++....+. .+.. .. +.+ +..+ .|.+++- ..
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~--~~~~----~~-------~~~--~~~~--~~~~~ll-~~ 63 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKP--EEQA----PI-------YSH--IHFT--SDLDEVL-ND 63 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCG--GGGS----GG-------GTT--CEEE--SCTHHHH-TC
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhH--HHHH----Hh-------cCC--CceE--CCHHHHh-cC
Confidence 589999999999986 677 66888999999988653211 0110 00 011 2333 3444431 11
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
.++|+|+.|+|+....+.+..++++|+ .+++
T Consensus 64 ~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~ 94 (345)
T 3f4l_A 64 PDVKLVVVCTHADSHFEYAKRALEAGK-NVLV 94 (345)
T ss_dssp TTEEEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCCEEEEcCChHHHHHHHHHHHHcCC-cEEE
Confidence 358999999999999999999999996 3444
No 73
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.00 E-value=6.6e-06 Score=68.85 Aligned_cols=79 Identities=22% Similarity=0.276 Sum_probs=58.7
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGA 83 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (254)
|||+++|+|.+|+.+++. + ++++++++. . . .+ .+ + +... .|.+++ ..++
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~-~leLv~v~~-~--k-------------~g-el---g--v~a~--~d~d~l---la~p 61 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G-NFEKIYAYD-R--I-------------SK-DI---P--GVVR--LDEFQV---PSDV 61 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S-CCSEEEEEC-S--S-------------CC-CC---S--SSEE--CSSCCC---CTTC
T ss_pred ceEEEECcCHHHHHHHhc---C-CcEEEEEEe-c--c-------------cc-cc---C--ceee--CCHHHH---hhCC
Confidence 699999999999999998 5 899998865 1 0 11 12 2 1121 456666 2479
Q ss_pred cEEEEecCCccCHHHHHHHHHCCCCeEEec
Q 025368 84 EYVVESTGVFTDKDKAAAHLKGGAKKVIIS 113 (254)
Q Consensus 84 Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS 113 (254)
|+|++|+++..-.+++++++++|+..++.|
T Consensus 62 D~VVe~A~~~av~e~~~~iL~aG~dvv~~S 91 (253)
T 1j5p_A 62 STVVECASPEAVKEYSLQILKNPVNYIIIS 91 (253)
T ss_dssp CEEEECSCHHHHHHHHHHHTTSSSEEEECC
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCEEEcC
Confidence 999999999988888999999998644444
No 74
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.00 E-value=2.5e-06 Score=62.20 Aligned_cols=98 Identities=15% Similarity=0.211 Sum_probs=59.0
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
++||.|+|+|++|+.+++.|.++...++..+ .+..+ +.. ... ..+ .........+.+.+.-...+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~-~r~~~----~~~--~~~-~~~-------~~~~~~d~~~~~~~~~~~~~ 69 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVA-DHDLA----ALA--VLN-RMG-------VATKQVDAKDEAGLAKALGG 69 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEE-ESCHH----HHH--HHH-TTT-------CEEEECCTTCHHHHHHHTTT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEE-eCCHH----HHH--HHH-hCC-------CcEEEecCCCHHHHHHHHcC
Confidence 4799999999999999999998864565443 22111 000 000 111 11111111111111111357
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCCCeEEecCC
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 115 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~ 115 (254)
+|+||.|+|..........+.+.|++.+++|.+
T Consensus 70 ~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 102 (118)
T 3ic5_A 70 FDAVISAAPFFLTPIIAKAAKAAGAHYFDLTED 102 (118)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEECCCSC
T ss_pred CCEEEECCCchhhHHHHHHHHHhCCCEEEecCc
Confidence 999999999888888888999999865555544
No 75
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.99 E-value=2.5e-06 Score=73.80 Aligned_cols=87 Identities=15% Similarity=0.249 Sum_probs=59.2
Q ss_pred CCCcEEEEEccCHHHHH-HHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~-l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|.++||||+|+|.+|+. +++.|.++|+++++++.....+. .+ ... . . + | +..+ .+.+++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~--~~----~~~-~---~--~-g--~~~~--~~~~~l--- 62 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAK--AL----PIC-E---S--W-R--IPYA--DSLSSL--- 62 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTT--HH----HHH-H---H--H-T--CCBC--SSHHHH---
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHH--HH----HHH-H---H--c-C--CCcc--CcHHHh---
Confidence 34589999999999996 89999988999998887543111 00 000 0 0 0 1 1121 223333
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCC
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
..++|+|+.|+|+....+.+..++++|+
T Consensus 63 ~~~~D~V~i~tp~~~h~~~~~~al~~G~ 90 (319)
T 1tlt_A 63 AASCDAVFVHSSTASHFDVVSTLLNAGV 90 (319)
T ss_dssp HTTCSEEEECSCTTHHHHHHHHHHHTTC
T ss_pred hcCCCEEEEeCCchhHHHHHHHHHHcCC
Confidence 2579999999999988899999999997
No 76
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.96 E-value=3.3e-06 Score=73.90 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=62.4
Q ss_pred CcEEEEEccCHHHHHHHHHHH-cCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGFGRIGRLVARVIL-QRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~-~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
|+||||+|+|.+|+..++.|. ++|+++++++..+..+. ..++ . . . + +.....+ .+.+++- ...
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~-~~~~-----~-~---~--~-g~~~~~~--~~~~~ll-~~~ 65 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEA-AQKV-----V-E---Q--Y-QLNATVY--PNDDSLL-ADE 65 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHH-HHHH-----H-H---H--T-TCCCEEE--SSHHHHH-HCT
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHH-HHHH-----H-H---H--h-CCCCeee--CCHHHHh-cCC
Confidence 589999999999999999999 78999999887653211 0000 0 0 0 0 1011222 2333331 113
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
++|+|+.|+|+....+.+..++++|+ .+++
T Consensus 66 ~~D~V~i~tp~~~h~~~~~~al~~Gk-~vl~ 95 (344)
T 3mz0_A 66 NVDAVLVTSWGPAHESSVLKAIKAQK-YVFC 95 (344)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCEEEECCCchhHHHHHHHHHHCCC-cEEE
Confidence 58999999999999999999999996 3444
No 77
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.96 E-value=5.5e-06 Score=72.70 Aligned_cols=92 Identities=21% Similarity=0.300 Sum_probs=62.1
Q ss_pred CcEEEEEccCHHHH-HHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGFGRIGR-LVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G~~G~-~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
|+||||+|+|.+|+ ..++.+.++|+++++++.... ...++ ... ....+ +..+ .+.+++- ...
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~---~~~~~-----a~~----~~~~~--~~~~--~~~~~ll-~~~ 64 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH---VNEKA-----AAP----FKEKG--VNFT--ADLNELL-TDP 64 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT---CCHHH-----HHH----HHTTT--CEEE--SCTHHHH-SCT
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC---HHHHH-----HHh----hCCCC--CeEE--CCHHHHh-cCC
Confidence 58999999999998 688888899999999987642 10111 000 00011 2233 2344431 113
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
++|+|+.|+|+....+++..++++|+ .+++
T Consensus 65 ~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~ 94 (349)
T 3i23_A 65 EIELITICTPAHTHYDLAKQAILAGK-SVIV 94 (349)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHcCC-EEEE
Confidence 68999999999999999999999996 3444
No 78
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.96 E-value=2.9e-06 Score=74.52 Aligned_cols=91 Identities=16% Similarity=0.173 Sum_probs=62.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC-CCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGFGRIGRLVARVILQR-DDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~-p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
|+||||+|+|.+|+..++.|.++ |++++++++....+. ...+ . . .. + +..+ .+.+++ ....
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~-~~~~-----~-~---~~---~--~~~~--~~~~~l-l~~~ 74 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAA-LKAA-----V-E---RT---G--ARGH--ASLTDM-LAQT 74 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHH-HHHH-----H-H---HH---C--CEEE--SCHHHH-HHHC
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHH-HHHH-----H-H---Hc---C--Ccee--CCHHHH-hcCC
Confidence 58999999999999999999998 889999887653211 0000 0 0 00 1 2333 233333 1113
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
++|+|+.|+|+....+.+..++++|+ .+++
T Consensus 75 ~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~ 104 (354)
T 3q2i_A 75 DADIVILTTPSGLHPTQSIECSEAGF-HVMT 104 (354)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCCC-CEEE
Confidence 79999999999999999999999996 3444
No 79
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.90 E-value=8.6e-06 Score=70.60 Aligned_cols=87 Identities=20% Similarity=0.269 Sum_probs=60.2
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
|+||||+|+|.+|+.+++.|.++++++++++.....+. ...+ ...-| . ...+ .+.+++- ..+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~-~~~~-----~~~~~------~--~~~~--~~~~~~l--~~~ 62 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLET-AATF-----ASRYQ------N--IQLF--DQLEVFF--KSS 62 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHH-HHHH-----GGGSS------S--CEEE--SCHHHHH--TSS
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHH-HHHH-----HHHcC------C--CeEe--CCHHHHh--CCC
Confidence 47999999999999999999999989998887543211 0000 00001 1 1222 2333331 147
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCC
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
+|+|+.|+|+....+.+..++++|+
T Consensus 63 ~D~V~i~tp~~~h~~~~~~al~~gk 87 (325)
T 2ho3_A 63 FDLVYIASPNSLHFAQAKAALSAGK 87 (325)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCEEEEeCChHHHHHHHHHHHHcCC
Confidence 9999999999998999999999996
No 80
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.90 E-value=7.3e-06 Score=70.79 Aligned_cols=85 Identities=19% Similarity=0.159 Sum_probs=60.5
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
++||||+|+|.+|+.+++.|.+++++++++++....+. ...+ . .. +..+ .+.+++- ...+
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~-~~~~--------~-------~~-~~~~--~~~~~~l-~~~~ 69 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDN-LALV--------P-------PG-CVIE--SDWRSVV-SAPE 69 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHH-HTTC--------C-------TT-CEEE--SSTHHHH-TCTT
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHH-HHHH--------H-------hh-Cccc--CCHHHHh-hCCC
Confidence 58999999999999999999999889998887653211 0000 0 11 2232 2333331 0137
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCC
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
+|+|+.|+|+....+.+..++++|+
T Consensus 70 ~D~V~i~tp~~~h~~~~~~al~~Gk 94 (315)
T 3c1a_A 70 VEAVIIATPPATHAEITLAAIASGK 94 (315)
T ss_dssp CCEEEEESCGGGHHHHHHHHHHTTC
T ss_pred CCEEEEeCChHHHHHHHHHHHHCCC
Confidence 9999999999998999999999996
No 81
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.89 E-value=7.8e-06 Score=73.95 Aligned_cols=98 Identities=11% Similarity=0.055 Sum_probs=63.6
Q ss_pred CCCcEEEEEccCHHHH-HHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~-~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|.++||||+|+|.+|+ .+++.|.++++++++++.....+. ...+ ...-| .....+.++ .|.+++- .
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~-~~~~-----a~~~g----~~~~~~~~~--~~~~~ll-~ 147 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEK-AKIV-----AAEYG----VDPRKIYDY--SNFDKIA-K 147 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHH-HHHH-----HHHTT----CCGGGEECS--SSGGGGG-G
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHH-HHHH-----HHHhC----CCccccccc--CCHHHHh-c
Confidence 5568999999999997 899999998899998887643211 0000 00001 000002222 2344441 1
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
..++|+|+.|+|+....+.+..++++|+ .+++
T Consensus 148 ~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~ 179 (433)
T 1h6d_A 148 DPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMC 179 (433)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEE
Confidence 1379999999999999999999999996 3444
No 82
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=97.88 E-value=0.00012 Score=60.10 Aligned_cols=135 Identities=19% Similarity=0.247 Sum_probs=81.7
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
+|-+|+|+ |++|+++.++. +.+++++++.... .+ . +++ .+
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~-----------------~~--------~---------~~l----~~ 53 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDV-----------------NG--------V---------EEL----DS 53 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEET-----------------TE--------E---------EEC----SC
T ss_pred ceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcC-----------------CC--------c---------ccc----cC
Confidence 68999999 99999998865 6677998875321 00 0 111 25
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCCCeEEe--cCCCCCCCeEEeeeCcccccCCCCeEEcCChhhHh-H----HHHHHHH
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNC-L----APLAKVI 155 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi--S~~~~~~~~~v~~vn~~~i~~~~~iVa~p~C~~t~-~----~l~l~pL 155 (254)
+|+|+|.|.+..+.+.++.+++.|++ +|+ ++++++.... + +.+..+..++-.||.+--. + +--++.+
T Consensus 54 ~DVvIDFT~P~a~~~~~~~~~~~g~~-~ViGTTG~~~~~~~~---l--~~~a~~~~vv~apNfSlGvnll~~l~~~aA~~ 127 (228)
T 1vm6_A 54 PDVVIDFSSPEALPKTVDLCKKYRAG-LVLGTTALKEEHLQM---L--RELSKEVPVVQAYNFSIGINVLKRFLSELVKV 127 (228)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHHTCE-EEECCCSCCHHHHHH---H--HHHTTTSEEEECSCCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHHcCCC-EEEeCCCCCHHHHHH---H--HHHHhhCCEEEeccccHHHHHHHHHHHHHHHh
Confidence 79999999999999999999999985 445 4443221000 0 1122236788888877422 2 2222223
Q ss_pred hhhcCeeEEEEEeeeeccccccccCCCCCCCcccc
Q 025368 156 HDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGG 190 (254)
Q Consensus 156 ~~~~~i~~~~v~~~~~~sg~~~~~d~~~~~~~~~~ 190 (254)
++.|.|+- +...|. .+.|.||+++...+
T Consensus 128 l~~ydiEI--iE~HH~-----~K~DAPSGTAl~la 155 (228)
T 1vm6_A 128 LEDWDVEI--VETHHR-----FKKDAPSGTAILLE 155 (228)
T ss_dssp TTTSEEEE--EEEECT-----TCCCSSCHHHHHHH
T ss_pred cCCCCEEE--EEcCCC-----CCCCCCCHHHHHHH
Confidence 33333442 234555 35788876544333
No 83
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.85 E-value=1.1e-05 Score=70.41 Aligned_cols=89 Identities=17% Similarity=0.199 Sum_probs=59.7
Q ss_pred CCcEEEEEccCHHHHHHHHHHH-cCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 2 GKVKIGINGFGRIGRLVARVIL-QRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~-~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
.++||||+|+|.+|+..++.|. ++++++++++.....+. ...+ ...-| . ..++ .+.+++- ..
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~-~~~~-----a~~~g------~--~~~~--~~~~~~l-~~ 69 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQ-LEWA-----KNELG------V--ETTY--TNYKDMI-DT 69 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHH-HHHH-----HHTTC------C--SEEE--SCHHHHH-TT
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHH-HHHH-----HHHhC------C--Cccc--CCHHHHh-cC
Confidence 4689999999999999999998 78889998887543111 0000 00001 0 0222 2222220 01
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCC
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
.++|+|+.|+|+....+.+..++++|+
T Consensus 70 ~~~D~V~i~tp~~~h~~~~~~al~~G~ 96 (346)
T 3cea_A 70 ENIDAIFIVAPTPFHPEMTIYAMNAGL 96 (346)
T ss_dssp SCCSEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCChHhHHHHHHHHHHCCC
Confidence 369999999999998999999999996
No 84
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.84 E-value=2e-05 Score=71.37 Aligned_cols=89 Identities=18% Similarity=0.346 Sum_probs=59.6
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcC---------CCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCC
Q 025368 2 GKVKIGINGFGRIGRLVARVILQR---------DDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 72 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~---------p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~ 72 (254)
+++||||+|+|.+|+.+++.|.+| ++++++++..+... +. . .+ ..+ ...+ .|
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~----~~-----~-----~~-~~~--~~~~--~d 69 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLD----KA-----E-----AL-AGG--LPLT--TN 69 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHH----HH-----H-----HH-HTT--CCEE--SC
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHH----Hh-----h-----hh-ccc--Cccc--CC
Confidence 458999999999999999988754 67899888765311 00 0 00 011 1111 23
Q ss_pred CCCCCcccCCCcEEEEecCC-ccCHHHHHHHHHCCCCeEEe
Q 025368 73 PEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 73 ~~~~~~~~~~~Dvv~~a~~~-~~s~~~~~~~~~~G~~~~vi 112 (254)
.+++ ....++|+|++|+|+ ....+++..++++|+ -|+
T Consensus 70 ~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK--hVv 107 (444)
T 3mtj_A 70 PFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK--HVV 107 (444)
T ss_dssp THHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC--EEE
T ss_pred HHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC--EEE
Confidence 3333 111468999999997 788899999999997 444
No 85
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.83 E-value=1.5e-05 Score=71.51 Aligned_cols=146 Identities=13% Similarity=0.110 Sum_probs=81.8
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCc-eeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEee--cCCCCCCCccc
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDV-ELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG--VRNPEEIPWAE 80 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~-~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~--~~~~~~~~~~~ 80 (254)
+||+|+|+|++|+.+++.|.+++++ ..+.+..+..+. ..+.. ..+. ..+ +..+.... ..+.+++.-..
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~-~~~la-~~l~-~~~------~~~~~~~~~D~~d~~~l~~~l 72 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSK-CQEIA-QSIK-AKG------YGEIDITTVDADSIEELVALI 72 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHH-HHHHH-HHHH-HTT------CCCCEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHH-HHHHH-HHhh-hhc------CCceEEEEecCCCHHHHHHHH
Confidence 6999999999999999999999875 333444332110 00000 0000 000 00011111 11111121001
Q ss_pred C--CCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCC-CCCCeEEeee---Cccccc-CCCCeEEcCChhhHhHHHHHH
Q 025368 81 T--GAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAPMFVVGV---NENEYK-PELNIVSNASCTTNCLAPLAK 153 (254)
Q Consensus 81 ~--~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~-~~~~~~v~~v---n~~~i~-~~~~iVa~p~C~~t~~~l~l~ 153 (254)
. ++|+||.|+|+......++.++++|+..+++|... ++...+.+.. -.+..+ ....++.+.||.+....+.+.
T Consensus 73 ~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~PG~~~l~a~ 152 (405)
T 4ina_A 73 NEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDPGVTNVFCA 152 (405)
T ss_dssp HHHCCSEEEECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTTTBHHHHHHH
T ss_pred HhhCCCEEEECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCCccHHHHHHH
Confidence 2 38999999999888888889999998644444332 2111111111 112222 146789999999988888888
Q ss_pred HHhhh
Q 025368 154 VIHDK 158 (254)
Q Consensus 154 pL~~~ 158 (254)
++.++
T Consensus 153 ~~~~~ 157 (405)
T 4ina_A 153 YAQKH 157 (405)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88775
No 86
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.82 E-value=9.1e-06 Score=71.56 Aligned_cols=97 Identities=12% Similarity=0.218 Sum_probs=62.2
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
|.++||||+|+|.+|+.+++.|.++|+++++++.....+. ...+ ...-| +.. ....+ .+.+++ ...
T Consensus 4 ~~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~-~~~~-----a~~~~----~~~-~~~~~--~~~~~l-l~~ 69 (362)
T 1ydw_A 4 ETQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEK-AKAF-----ATANN----YPE-STKIH--GSYESL-LED 69 (362)
T ss_dssp --CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHH-HHHH-----HHHTT----CCT-TCEEE--SSHHHH-HHC
T ss_pred CCceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHH-HHHH-----HHHhC----CCC-CCeee--CCHHHH-hcC
Confidence 3468999999999999999999999999998887653211 0000 00000 000 01222 233333 011
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
.++|+|+.|+|+....+++..++++|+ .+++
T Consensus 70 ~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~ 100 (362)
T 1ydw_A 70 PEIDALYVPLPTSLHVEWAIKAAEKGK-HILL 100 (362)
T ss_dssp TTCCEEEECCCGGGHHHHHHHHHTTTC-EEEE
T ss_pred CCCCEEEEcCChHHHHHHHHHHHHCCC-eEEE
Confidence 368999999999999999999999997 3444
No 87
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.82 E-value=1.3e-05 Score=70.85 Aligned_cols=90 Identities=20% Similarity=0.152 Sum_probs=57.8
Q ss_pred CCCcEEEEEccCHHHHHHHHHHH-------cCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCC
Q 025368 1 MGKVKIGINGFGRIGRLVARVIL-------QRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNP 73 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~-------~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~ 73 (254)
|.++||||||+|++|+.-++.+. +.|+++++++.....+. ..++ . . . ++. ..++ .|.
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~-a~~~-----a--~--~--~g~--~~~y--~d~ 86 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGL-AEAR-----A--G--E--FGF--EKAT--ADW 86 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TT-HHHH-----H--H--H--HTC--SEEE--SCH
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHH-HHHH-----H--H--H--hCC--Ceec--CCH
Confidence 66789999999999987666543 35778999988653211 0000 0 0 0 111 1222 233
Q ss_pred CCCCcccCCCcEEEEecCCccCHHHHHHHHHCCC
Q 025368 74 EEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 74 ~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
+++ ....++|+|+-|||+....+++.+++++|+
T Consensus 87 ~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk 119 (393)
T 4fb5_A 87 RAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK 119 (393)
T ss_dssp HHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred HHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC
Confidence 333 112468999999999999999999999997
No 88
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.81 E-value=1.2e-05 Score=70.22 Aligned_cols=102 Identities=13% Similarity=0.123 Sum_probs=58.9
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCC-------CceeEEeeeeeeccccccccccceeecC-CeeEEECCEEEE-Eee-c
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRD-------DVELVATYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVT-VFG-V 70 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p-------~~~v~~~~~~~~~s~~g~~~~~~v~~~~-g~~l~~~~~~~~-~~~-~ 70 (254)
|+++||||+|+|.+|+.+++.|.+++ +++++++..+..+. ... .+..+. .+.+. .+ .+. ++. .
T Consensus 4 M~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~-~~~----~~~~~~~~~~~~-~~-~~~~~~~~~ 76 (331)
T 3c8m_A 4 MKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSY-YNE----RIDIGKVISYKE-KG-SLDSLEYES 76 (331)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEE-ECT----TCCHHHHHHHHH-TT-CGGGCCSEE
T ss_pred CcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHH-hhc----ccChHHHhhhhc-cC-CcccccCCC
Confidence 33589999999999999999998876 58888876543110 000 000000 00000 00 000 000 0
Q ss_pred CCCCCCCcccCCCcEEEEecCCc----cCHHHHHHHHHCCCCeEEec
Q 025368 71 RNPEEIPWAETGAEYVVESTGVF----TDKDKAAAHLKGGAKKVIIS 113 (254)
Q Consensus 71 ~~~~~~~~~~~~~Dvv~~a~~~~----~s~~~~~~~~~~G~~~~viS 113 (254)
.|.+++- ..++|+|++|+|+. ...+++.+++++|+ -|++
T Consensus 77 ~d~~~ll--~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGk--hVvt 119 (331)
T 3c8m_A 77 ISASEAL--ARDFDIVVDATPASADGKKELAFYKETFENGK--DVVT 119 (331)
T ss_dssp CCHHHHH--HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTC--EEEE
T ss_pred CCHHHHh--CCCCCEEEECCCCCCccchHHHHHHHHHHCCC--eEEe
Confidence 1233321 14689999999995 56678899999997 4553
No 89
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.81 E-value=1.8e-05 Score=71.65 Aligned_cols=97 Identities=26% Similarity=0.269 Sum_probs=62.4
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEee--cCCCCCCCc
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG--VRNPEEIPW 78 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~--~~~~~~~~~ 78 (254)
|+++||||+|+|.+|+..++.|.++|+++++++.....+. ...+. .... .-| +. ...++. ..|.+++-
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~-~~~~a-~~~~-~~g----~~--~~~~~~~~~~~~~~ll- 87 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYM-VGRAQ-EILK-KNG----KK--PAKVFGNGNDDYKNML- 87 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHH-HHHHH-HHHH-HTT----CC--CCEEECSSTTTHHHHT-
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHH-HHHHH-HHHH-hcC----CC--CCceeccCCCCHHHHh-
Confidence 5578999999999999999999999999999987653211 00000 0000 001 00 012221 01333331
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCC
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
...++|+|+.|+|+....+++.+++++|+
T Consensus 88 ~~~~vD~V~i~tp~~~h~~~~~~al~aGk 116 (444)
T 2ixa_A 88 KDKNIDAVFVSSPWEWHHEHGVAAMKAGK 116 (444)
T ss_dssp TCTTCCEEEECCCGGGHHHHHHHHHHTTC
T ss_pred cCCCCCEEEEcCCcHHHHHHHHHHHHCCC
Confidence 11369999999999999999999999997
No 90
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.80 E-value=2.3e-05 Score=67.13 Aligned_cols=86 Identities=19% Similarity=0.245 Sum_probs=60.4
Q ss_pred CCcEEEEEccCHHHHHHHHHHHc---CCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCc
Q 025368 2 GKVKIGINGFGRIGRLVARVILQ---RDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPW 78 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~---~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 78 (254)
.|+||||+|+|.+|+..++.+.. +++++++++..+. . .. . . .+ +. + .+.+++ .
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~--~-~a-------~-----~---~g--~~-~--~~~~el-l 61 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR--E-LG-------S-----L---DE--VR-Q--ISLEDA-L 61 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSS--C-CC-------E-----E---TT--EE-B--CCHHHH-H
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECch--H-HH-------H-----H---cC--CC-C--CCHHHH-h
Confidence 36899999999999999999887 6789998887542 1 00 0 0 12 11 1 233333 1
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
...++|+|+.|+|+....+++..++++|+ .+++
T Consensus 62 ~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 94 (294)
T 1lc0_A 62 RSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLV 94 (294)
T ss_dssp HCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred cCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEE
Confidence 11368999999999999999999999997 3444
No 91
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.78 E-value=2.5e-05 Score=64.61 Aligned_cols=75 Identities=25% Similarity=0.437 Sum_probs=55.2
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGA 83 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (254)
|||||+|+|.+|+.+++.|. +++++++.++.+. . . .. . .+ .+++++. ..++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~-~~g~~lv~v~d~~--~----------~--~~------~----~~--~~~~~l~--~~~~ 51 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLE-RNGFEIAAILDVR--G----------E--HE------K----MV--RGIDEFL--QREM 51 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEECSS--C----------C--CT------T----EE--SSHHHHT--TSCC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCCEEEEEEecC--c----------c--hh------h----hc--CCHHHHh--cCCC
Confidence 39999999999999999988 5789987765431 0 0 00 0 11 2333331 1479
Q ss_pred cEEEEecCCccCHHHHHHHHHCCC
Q 025368 84 EYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 84 Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
|+||+|+|+....+.+..++++|+
T Consensus 52 DvVv~~~~~~~~~~~~~~~l~~G~ 75 (236)
T 2dc1_A 52 DVAVEAASQQAVKDYAEKILKAGI 75 (236)
T ss_dssp SEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CEEEECCCHHHHHHHHHHHHHCCC
Confidence 999999999988899999999997
No 92
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.78 E-value=4.1e-06 Score=73.97 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=62.0
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCc-------eeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCC
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDV-------ELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNP 73 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~-------~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~ 73 (254)
|+++||||||+|.+|+.-++.+.+.|++ +++++.....+. .-.+ . . . ++. ..++ .|.
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~-a~~~-----a--~--~--~g~--~~~~--~d~ 67 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEA-VRAA-----A--G--K--LGW--STTE--TDW 67 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHH-HHHH-----H--H--H--HTC--SEEE--SCH
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHH-HHHH-----H--H--H--cCC--Cccc--CCH
Confidence 7789999999999999999988887754 788877543111 0000 0 0 0 111 1222 233
Q ss_pred CCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 74 EEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 74 ~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
+++- ...++|+|+-|||+....+++.+++++|+ .|.+
T Consensus 68 ~~ll-~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~ 104 (390)
T 4h3v_A 68 RTLL-ERDDVQLVDVCTPGDSHAEIAIAALEAGK-HVLC 104 (390)
T ss_dssp HHHT-TCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred HHHh-cCCCCCEEEEeCChHHHHHHHHHHHHcCC-Ccee
Confidence 3331 12468999999999999999999999996 3444
No 93
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.76 E-value=1.8e-05 Score=68.91 Aligned_cols=101 Identities=19% Similarity=0.293 Sum_probs=58.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC--------CCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQR--------DDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPE 74 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~--------p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~ 74 (254)
|+||||+|+|.+|+.+++.|.++ ++++++++..+.... ... +.. .+.+........++...|.+
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~-~~~-----id~--~~~~~~~~~~~~~~~~~d~~ 73 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSI-SGD-----FSL--VEALRMKRETGMLRDDAKAI 73 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEE-ESS-----CCH--HHHHHHHHHHSSCSBCCCHH
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHh-ccc-----cCH--HHHHhhhccCccccCCCCHH
Confidence 58999999999999999999988 889999987543110 000 000 00000000000010001222
Q ss_pred CCCcccCCCcEEEEecCCccC----HHHHHHHHHCCCCeEEecC
Q 025368 75 EIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVIISA 114 (254)
Q Consensus 75 ~~~~~~~~~Dvv~~a~~~~~s----~~~~~~~~~~G~~~~viS~ 114 (254)
++ ....++|+|++|+|+... .+++..++++|+ -|+++
T Consensus 74 ~l-l~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGk--hVv~~ 114 (327)
T 3do5_A 74 EV-VRSADYDVLIEASVTRVDGGEGVNYIREALKRGK--HVVTS 114 (327)
T ss_dssp HH-HHHSCCSEEEECCCCC----CHHHHHHHHHTTTC--EEEEC
T ss_pred HH-hcCCCCCEEEECCCCcccchhHHHHHHHHHHCCC--eEEec
Confidence 22 011468999999998654 788899999997 45533
No 94
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.73 E-value=3.3e-05 Score=68.11 Aligned_cols=95 Identities=22% Similarity=0.183 Sum_probs=58.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
+|||.|+|+|++|+.+++.|.++.++.+........ . .+ ... ...+.+ ...|.+++.-...+
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~~~~----~-----~~--~~~------~~~~~~-d~~d~~~l~~~~~~ 77 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNNENL----E-----KV--KEF------ATPLKV-DASNFDKLVEVMKE 77 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHH----H-----HH--TTT------SEEEEC-CTTCHHHHHHHHTT
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCHHHH----H-----HH--hcc------CCcEEE-ecCCHHHHHHHHhC
Confidence 479999999999999999998775544333211100 0 00 010 111111 11222222111368
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCCCeEEecCC
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 115 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~ 115 (254)
+|+|+.|+|+......++.++++|+..+.+|..
T Consensus 78 ~DvVi~~~p~~~~~~v~~~~~~~g~~yvD~s~~ 110 (365)
T 3abi_A 78 FELVIGALPGFLGFKSIKAAIKSKVDMVDVSFM 110 (365)
T ss_dssp CSEEEECCCGGGHHHHHHHHHHHTCEEEECCCC
T ss_pred CCEEEEecCCcccchHHHHHHhcCcceEeeecc
Confidence 999999999998888999999999965555544
No 95
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.72 E-value=2.9e-05 Score=67.20 Aligned_cols=86 Identities=22% Similarity=0.237 Sum_probs=57.6
Q ss_pred CcEEEEEccCHHHHH-HHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEE-eecCCCCCCCccc
Q 025368 3 KVKIGINGFGRIGRL-VARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV-FGVRNPEEIPWAE 80 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~-l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~-~~~~~~~~~~~~~ 80 (254)
|+||||+|+|.+|+. +++.|.++|+++++ +.....+. ..++ ...- + +.. +. .+.+.+ .
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~~~~~-~~~~-----a~~~-------g--~~~~~~-~~~~~l---~ 61 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTRNPKV-LGTL-----ATRY-------R--VSATCT-DYRDVL---Q 61 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECSCHHH-HHHH-----HHHT-------T--CCCCCS-STTGGG---G
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeCCHHH-HHHH-----HHHc-------C--CCcccc-CHHHHh---h
Confidence 589999999999984 99999988889988 76543111 0000 0000 1 111 11 112222 2
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCC
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAK 108 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~ 108 (254)
.++|+|+.|+|+....+.+..++++|+.
T Consensus 62 ~~~D~V~i~tp~~~h~~~~~~al~~Gk~ 89 (323)
T 1xea_A 62 YGVDAVMIHAATDVHSTLAAFFLHLGIP 89 (323)
T ss_dssp GCCSEEEECSCGGGHHHHHHHHHHTTCC
T ss_pred cCCCEEEEECCchhHHHHHHHHHHCCCe
Confidence 5799999999999989999999999974
No 96
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.72 E-value=1.4e-05 Score=69.61 Aligned_cols=92 Identities=16% Similarity=0.188 Sum_probs=60.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCC--CceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 3 KVKIGINGFGRIGRLVARVILQRD--DVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p--~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
|+||||+|+|.+|+..++.|.+.| ++++++++.+..+. ...+. . . + +. ...+ .+.+++- ..
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~-a~~~a----~-----~--~-~~-~~~~--~~~~~ll-~~ 64 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSR-AKEFA----Q-----K--H-DI-PKAY--GSYEELA-KD 64 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHH-HHHHH----H-----H--H-TC-SCEE--SSHHHHH-HC
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHH-HHHHH----H-----H--c-CC-Cccc--CCHHHHh-cC
Confidence 589999999999999999999887 47888887653211 00000 0 0 0 10 0122 2333331 11
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
.++|+|+.|+|+....+++..++++|+ .+++
T Consensus 65 ~~vD~V~i~tp~~~H~~~~~~al~~Gk-hVl~ 95 (334)
T 3ohs_X 65 PNVEVAYVGTQHPQHKAAVMLCLAAGK-AVLC 95 (334)
T ss_dssp TTCCEEEECCCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCCEEEECCCcHHHHHHHHHHHhcCC-EEEE
Confidence 369999999999999999999999996 3444
No 97
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.65 E-value=1.2e-05 Score=71.46 Aligned_cols=91 Identities=19% Similarity=0.264 Sum_probs=62.4
Q ss_pred CcEEEEEccC-HHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGFG-RIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G-~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
++||||+|+| .+|...++.|.++|+++++++.....+. ..++ . . .. + +..+ .|.+++- ...
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~-----a--~--~~---g--~~~~--~~~~ell-~~~ 63 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDV-RERF-----G--K--EY---G--IPVF--ATLAEMM-QHV 63 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHH-HHHH-----H--H--HH---T--CCEE--SSHHHHH-HHS
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHH-HHHH-----H--H--Hc---C--CCeE--CCHHHHH-cCC
Confidence 5899999998 9999999999999999999987653110 0000 0 0 00 1 1222 2333331 113
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
++|+|+.|+|+....+.+..++++|+ .+++
T Consensus 64 ~vD~V~i~tp~~~H~~~~~~al~aGk-~Vl~ 93 (387)
T 3moi_A 64 QMDAVYIASPHQFHCEHVVQASEQGL-HIIV 93 (387)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHCCC-ceee
Confidence 69999999999999999999999996 3444
No 98
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.61 E-value=6.5e-05 Score=61.47 Aligned_cols=90 Identities=10% Similarity=0.197 Sum_probs=55.1
Q ss_pred CcEEEEEccCHHHHHHHHH-HHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGFGRIGRLVARV-ILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~-L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
.+||+|+|+|.+|+.+++. ...++.++++++.....+ + .|+. ..+ +.+....+.+++ ..
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~----k---------~g~~--i~g--v~V~~~~dl~el---i~ 144 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINES----K---------IGTE--VGG--VPVYNLDDLEQH---VK 144 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTT----T---------TTCE--ETT--EEEEEGGGHHHH---CS
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHH----H---------HHhH--hcC--CeeechhhHHHH---HH
Confidence 3689999999999999994 445567889888753211 1 1111 233 233322333333 12
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
..|+|+.|+|+....+.+..+.++|++.++.
T Consensus 145 ~~D~ViIAvPs~~~~ei~~~l~~aGi~~Iln 175 (215)
T 2vt3_A 145 DESVAILTVPAVAAQSITDRLVALGIKGILN 175 (215)
T ss_dssp SCCEEEECSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred hCCEEEEecCchhHHHHHHHHHHcCCCEEEE
Confidence 2399999999988888999999999874443
No 99
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.59 E-value=3.6e-05 Score=66.97 Aligned_cols=93 Identities=13% Similarity=0.220 Sum_probs=58.2
Q ss_pred CCCcEEEEEccCHHHH-HHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~-~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|+++||||+|+|.+|. .+++.|. +++++++++.....+. ...+. . . +++ ...+ .|.+++ ..
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~-~~~~~lvav~d~~~~~-~~~~a----~-----~--~~~--~~~~--~~~~~l-l~ 63 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLI-DAGAELAGVFESDSDN-RAKFT----S-----L--FPS--VPFA--ASAEQL-IT 63 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHH-HTTCEEEEEECSCTTS-CHHHH----H-----H--STT--CCBC--SCHHHH-HT
T ss_pred CCccEEEEECCChHHHHHhhhhhc-CCCcEEEEEeCCCHHH-HHHHH----H-----h--cCC--Cccc--CCHHHH-hh
Confidence 7789999999998886 5777775 5789999987653211 00000 0 0 011 1122 223332 01
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
..++|+|+.|+|+....+++..++++|+ .+++
T Consensus 64 ~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~ 95 (336)
T 2p2s_A 64 DASIDLIACAVIPCDRAELALRTLDAGK-DFFT 95 (336)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEE
Confidence 1369999999999999999999999996 2444
No 100
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.58 E-value=8.9e-05 Score=64.01 Aligned_cols=91 Identities=20% Similarity=0.248 Sum_probs=61.2
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCC----
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIP---- 77 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~---- 77 (254)
|+||||+|+ |++|+..++.+.+. +++++++.....+. .... .. +.+ ...+ .+.+++.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~--~~~~------~~-----~~~--~~~~--~~~~~ll~~~~ 64 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNV--GLVD------SF-----FPE--AEFF--TEPEAFEAYLE 64 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCC--GGGG------GT-----CTT--CEEE--SCHHHHHHHHH
T ss_pred ceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHH--HHHH------hh-----CCC--Ccee--CCHHHHHHHhh
Confidence 589999999 89999999999987 58999887653211 1110 00 011 2233 1222220
Q ss_pred -c--ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 78 -W--AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 78 -~--~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
| ...++|+|+.|||+....+++.+++++|+ .+++
T Consensus 65 ~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~ 101 (312)
T 3o9z_A 65 DLRDRGEGVDYLSIASPNHLHYPQIRMALRLGA-NALS 101 (312)
T ss_dssp HHHHTTCCCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred hhcccCCCCcEEEECCCchhhHHHHHHHHHCCC-eEEE
Confidence 0 12579999999999999999999999996 3444
No 101
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.54 E-value=0.0001 Score=63.77 Aligned_cols=91 Identities=22% Similarity=0.182 Sum_probs=61.2
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCC----
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIP---- 77 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~---- 77 (254)
|+||||+|+ |++|...++.+.+. +.+++++.....+ ...+. .. +.+ ..++. +.+++.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~--~~~~~------~~-----~~~--~~~~~--~~~~ll~~~~ 64 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDS--VGIID------SI-----SPQ--SEFFT--EFEFFLDHAS 64 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCC--CGGGG------GT-----CTT--CEEES--SHHHHHHHHH
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHH--HHHHH------hh-----CCC--CcEEC--CHHHHHHhhh
Confidence 589999999 89999999999987 6899988765311 11110 00 011 22332 222220
Q ss_pred -c---ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 78 -W---AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 78 -~---~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
| ...++|+|+.|||+....+++.+++++|+ .+++
T Consensus 65 ~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~ 102 (318)
T 3oa2_A 65 NLKRDSATALDYVSICSPNYLHYPHIAAGLRLGC-DVIC 102 (318)
T ss_dssp HHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred hhhhccCCCCcEEEECCCcHHHHHHHHHHHHCCC-eEEE
Confidence 0 02579999999999999999999999997 3444
No 102
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.51 E-value=6.6e-05 Score=67.83 Aligned_cols=100 Identities=14% Similarity=0.271 Sum_probs=60.8
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccc------c-ccccccceeecCC-eeEE---ECCEEEEEeec
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSV------H-GQWKHHELKVKDD-KTLL---FGEKPVTVFGV 70 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~------~-g~~~~~~v~~~~g-~~l~---~~~~~~~~~~~ 70 (254)
.++||||+|+|.+|+.+++.+.+.|+++++++..+..+.. + |.. ..+..... ..+. ..+ ...++
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~--~~~~~~~~~~~i~~a~~~g-~~~v~-- 96 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDE--ENAREATTESAMTRAIEAG-KIAVT-- 96 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSS--TTEEECSSHHHHHHHHHTT-CEEEE--
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCc--cccccccchhhhhhhhccC-CceEE--
Confidence 4689999999999999999999999999999986542110 0 100 00000000 0000 001 12333
Q ss_pred CCCCCCCcccCCCcEEEEecCCc-cCHHHHHHHHHCCC
Q 025368 71 RNPEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGA 107 (254)
Q Consensus 71 ~~~~~~~~~~~~~Dvv~~a~~~~-~s~~~~~~~~~~G~ 107 (254)
.|.+++ ....++|+|+.|||+- ...+++..++++|+
T Consensus 97 ~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK 133 (446)
T 3upl_A 97 DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK 133 (446)
T ss_dssp SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC
T ss_pred CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC
Confidence 233333 1124689999999874 55788899999997
No 103
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.51 E-value=2.1e-05 Score=69.37 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=58.0
Q ss_pred CCCcEEEEEccCHHHH-HHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~-~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|.++||||+|+|.+|. .++..+. +|+++++++.....+. ...+. . . ++. ...+ .|.+++- .
T Consensus 24 m~~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~~~~~-a~~~a----~-----~--~~~--~~~~--~~~~~ll-~ 85 (361)
T 3u3x_A 24 MDELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEKDDAL-AAEFS----A-----V--YAD--ARRI--ATAEEIL-E 85 (361)
T ss_dssp --CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECSCHHH-HHHHH----H-----H--SSS--CCEE--SCHHHHH-T
T ss_pred ccCcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcCCHHH-HHHHH----H-----H--cCC--Cccc--CCHHHHh-c
Confidence 4468999999998885 4666665 5889999988653211 00000 0 0 011 1222 2333331 1
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
..++|+|+.|+|+....+++..++++|+ .+++
T Consensus 86 ~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~ 117 (361)
T 3u3x_A 86 DENIGLIVSAAVSSERAELAIRAMQHGK-DVLV 117 (361)
T ss_dssp CTTCCEEEECCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred CCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEE
Confidence 1368999999999999999999999997 3444
No 104
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.45 E-value=0.00011 Score=59.92 Aligned_cols=90 Identities=16% Similarity=0.130 Sum_probs=58.6
Q ss_pred CcEEEEEccCHHHHHHHHHH-HcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGFGRIGRLVARVI-LQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L-~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
..||+|+|+|.+|+.+++.+ .++ .++++++.... . .+ .|+. ..+ +.+....+.+++- ..
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~d--p--~k---------~g~~--i~g--v~V~~~~dl~ell-~~- 139 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVD--P--EK---------VGRP--VRG--GVIEHVDLLPQRV-PG- 139 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESC--T--TT---------TTCE--ETT--EEEEEGGGHHHHS-TT-
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCC--H--HH---------Hhhh--hcC--CeeecHHhHHHHH-Hc-
Confidence 46999999999999999963 334 68888876432 1 00 1111 233 2333223333331 12
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
++|+|+.|+|+....+.+..+.++|++.++.
T Consensus 140 ~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Iln 170 (211)
T 2dt5_A 140 RIEIALLTVPREAAQKAADLLVAAGIKGILN 170 (211)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEeCCchhHHHHHHHHHHcCCCEEEE
Confidence 6899999999988888899999999864443
No 105
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.44 E-value=6.4e-05 Score=65.61 Aligned_cols=92 Identities=21% Similarity=0.209 Sum_probs=61.9
Q ss_pred CcEEEEEccC-HHHHHHHHHHHcC-CCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 3 KVKIGINGFG-RIGRLVARVILQR-DDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 3 ~~~V~IvG~G-~~G~~l~~~L~~~-p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
++||||+|+| .+|+..++.|.+. |+++++++.....+. ...+ . . . ++. ..++ .|.+++ ...
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~-~~~~-----a--~--~--~~~--~~~~--~~~~~l-l~~ 80 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSH-AEEF-----A--K--M--VGN--PAVF--DSYEEL-LES 80 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHH-HHHH-----H--H--H--HSS--CEEE--SCHHHH-HHS
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHH-HHHH-----H--H--H--hCC--Cccc--CCHHHH-hcC
Confidence 5899999998 8999999999998 889999987653211 0000 0 0 0 011 1222 233333 111
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
.++|+|+.|+|+....+++..++++|+ .+++
T Consensus 81 ~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 111 (340)
T 1zh8_A 81 GLVDAVDLTLPVELNLPFIEKALRKGV-HVIC 111 (340)
T ss_dssp SCCSEEEECCCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHCCC-cEEE
Confidence 369999999999999999999999996 3444
No 106
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.44 E-value=3e-05 Score=69.43 Aligned_cols=94 Identities=17% Similarity=0.171 Sum_probs=59.6
Q ss_pred CC-CcEEEEEccCHHHHHHHHHHHcCC--------CceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecC
Q 025368 1 MG-KVKIGINGFGRIGRLVARVILQRD--------DVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 71 (254)
Q Consensus 1 M~-~~~V~IvG~G~~G~~l~~~L~~~p--------~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~ 71 (254)
|+ ++||||||+|.+|+.-++.+.+.+ +++++++.....+. .-++. . . ++. ..++ .
T Consensus 23 Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~-a~~~a----~-----~--~~~--~~~y--~ 86 (412)
T 4gqa_A 23 MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAM-AERHA----A-----K--LGA--EKAY--G 86 (412)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHH-HHHHH----H-----H--HTC--SEEE--S
T ss_pred ccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHH-HHHHH----H-----H--cCC--CeEE--C
Confidence 44 479999999999999888887653 56888887543110 00000 0 0 111 1222 2
Q ss_pred CCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 72 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 72 ~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
|.+++ ....++|+|+-|||+....+++.+++++|+ .|.+
T Consensus 87 d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~ 125 (412)
T 4gqa_A 87 DWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAGK-HVYC 125 (412)
T ss_dssp SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcCC-CeEe
Confidence 33333 112468999999999999999999999997 3444
No 107
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.37 E-value=3.5e-05 Score=68.79 Aligned_cols=93 Identities=16% Similarity=0.103 Sum_probs=59.1
Q ss_pred CCCcEEEEEccCH---HHHHHHHHHHcCCCceeEE-eeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCC
Q 025368 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-TYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEI 76 (254)
Q Consensus 1 M~~~~V~IvG~G~---~G~~l~~~L~~~p~~~v~~-~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~ 76 (254)
|.++||||+|+|. +|+.-++.+..++++++++ +.....+. ...+ ...-| -.....+ .|.+++
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~-a~~~-----a~~~g------~~~~~~~--~~~~~l 75 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIR-GSAF-----GEQLG------VDSERCY--ADYLSM 75 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHH-HHHH-----HHHTT------CCGGGBC--SSHHHH
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHH-HHHH-----HHHhC------CCcceee--CCHHHH
Confidence 4568999999998 9999999999888899987 55442110 0000 00001 0000111 122222
Q ss_pred Ccc----cCCCcEEEEecCCccCHHHHHHHHHCCC
Q 025368 77 PWA----ETGAEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 77 ~~~----~~~~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
--. ..++|+|+.|+|+....+.+..++++|+
T Consensus 76 l~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGk 110 (398)
T 3dty_A 76 FEQEARRADGIQAVSIATPNGTHYSITKAALEAGL 110 (398)
T ss_dssp HHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTC
T ss_pred HhcccccCCCCCEEEECCCcHHHHHHHHHHHHCCC
Confidence 000 0258999999999999999999999997
No 108
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.36 E-value=0.00015 Score=64.18 Aligned_cols=84 Identities=18% Similarity=0.214 Sum_probs=57.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCC-CceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRD-DVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p-~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
++||+|+|+|+ |+.-++.+.+.| .++++++..+..+. ..++ .. . + | ++.+ .|.+++ .+
T Consensus 7 ~~rv~VvG~G~-g~~h~~a~~~~~~~~elvav~~~~~~~-a~~~-----a~----~--~-g--v~~~--~~~~~l---~~ 65 (372)
T 4gmf_A 7 KQRVLIVGAKF-GEMYLNAFMQPPEGLELVGLLAQGSAR-SREL-----AH----A--F-G--IPLY--TSPEQI---TG 65 (372)
T ss_dssp CEEEEEECSTT-THHHHHTTSSCCTTEEEEEEECCSSHH-HHHH-----HH----H--T-T--CCEE--SSGGGC---CS
T ss_pred CCEEEEEehHH-HHHHHHHHHhCCCCeEEEEEECCCHHH-HHHH-----HH----H--h-C--CCEE--CCHHHH---hc
Confidence 58999999995 999899888876 59999998754211 0000 00 1 1 2 2334 345555 36
Q ss_pred CCcEEEEecCCccC----HHHHHHHHHCCC
Q 025368 82 GAEYVVESTGVFTD----KDKAAAHLKGGA 107 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s----~~~~~~~~~~G~ 107 (254)
++|+|+-|+|+... .+++.+++++|+
T Consensus 66 ~~D~v~i~~p~~~h~~~~~~~a~~al~aGk 95 (372)
T 4gmf_A 66 MPDIACIVVRSTVAGGAGTQLARHFLARGV 95 (372)
T ss_dssp CCSEEEECCC--CTTSHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCcccchhHHHHHHHHHHcCC
Confidence 79999999998765 688899999997
No 109
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.34 E-value=0.00026 Score=58.08 Aligned_cols=98 Identities=15% Similarity=0.055 Sum_probs=56.0
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEee--cCCCCCCC
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG--VRNPEEIP 77 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~--~~~~~~~~ 77 (254)
|+|++|.|.|+ |.+|+.+++.|+++.+.++..+. +..+. .... . .. + +.++. ..|++++.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~-R~~~~-~~~~-----~-~~-------~--~~~~~~Dl~d~~~~~ 83 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFA-RQPAK-IHKP-----Y-PT-------N--SQIIMGDVLNHAALK 83 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEE-SSGGG-SCSS-----C-CT-------T--EEEEECCTTCHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEE-cChhh-hccc-----c-cC-------C--cEEEEecCCCHHHHH
Confidence 56789999999 99999999999988645655543 22110 0000 0 01 1 22222 12222221
Q ss_pred cccCCCcEEEEecCCcc----CHHHHHHHHHCCCCeEEe-cCC
Q 025368 78 WAETGAEYVVESTGVFT----DKDKAAAHLKGGAKKVII-SAP 115 (254)
Q Consensus 78 ~~~~~~Dvv~~a~~~~~----s~~~~~~~~~~G~~~~vi-S~~ 115 (254)
-..+++|+||.+.+... +...++.+.+.|.+++|. |..
T Consensus 84 ~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~ 126 (236)
T 3qvo_A 84 QAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSL 126 (236)
T ss_dssp HHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecc
Confidence 12367999998887632 234556667788776664 443
No 110
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.34 E-value=4.3e-05 Score=69.96 Aligned_cols=91 Identities=19% Similarity=0.142 Sum_probs=60.6
Q ss_pred CCCcEEEEEcc----CHHHHHHHHHHHcC-CCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCC
Q 025368 1 MGKVKIGINGF----GRIGRLVARVILQR-DDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEE 75 (254)
Q Consensus 1 M~~~~V~IvG~----G~~G~~l~~~L~~~-p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~ 75 (254)
|.++||||+|+ |.+|+..++.|.++ |+++++++.....+. ...+ ...-| ......+ .+.++
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~-a~~~-----a~~~g------~~~~~~~--~d~~e 102 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKS-SLQT-----IEQLQ------LKHATGF--DSLES 102 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHH-HHHH-----HHHTT------CTTCEEE--SCHHH
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHH-HHHH-----HHHcC------CCcceee--CCHHH
Confidence 34589999999 99999999999998 899999987653211 0000 00001 0001222 23333
Q ss_pred CCcccCCCcEEEEecCCccCHHHHHHHHHCC
Q 025368 76 IPWAETGAEYVVESTGVFTDKDKAAAHLKGG 106 (254)
Q Consensus 76 ~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G 106 (254)
+- ...++|+|+.|+|+....+++..++++|
T Consensus 103 ll-~~~~vD~V~I~tp~~~H~~~~~~al~aG 132 (479)
T 2nvw_A 103 FA-QYKDIDMIVVSVKVPEHYEVVKNILEHS 132 (479)
T ss_dssp HH-HCTTCSEEEECSCHHHHHHHHHHHHHHS
T ss_pred Hh-cCCCCCEEEEcCCcHHHHHHHHHHHHCC
Confidence 31 1136999999999998899999999999
No 111
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.33 E-value=2.7e-05 Score=67.91 Aligned_cols=95 Identities=9% Similarity=0.028 Sum_probs=59.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
|+||||+|+|.+|+..++.| +|+++++++.....+....++. ... .. + +.....+ .|.+++ ....+
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~--~~~-~~-----~-~~~~~~~--~~~~~l-l~~~~ 67 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLE--KAI-SE-----M-NIKPKKY--NNWWEM-LEKEK 67 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHH--HHH-HT-----T-TCCCEEC--SSHHHH-HHHHC
T ss_pred ceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHH--HHH-HH-----c-CCCCccc--CCHHHH-hcCCC
Confidence 58999999976777888877 8899999998653211101110 000 00 0 1011233 233333 11146
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
+|+|+-|||+....+++.+++++|+. +++
T Consensus 68 vD~V~I~tp~~~H~~~~~~al~aGkh-Vl~ 96 (337)
T 3ip3_A 68 PDILVINTVFSLNGKILLEALERKIH-AFV 96 (337)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHTTCE-EEE
T ss_pred CCEEEEeCCcchHHHHHHHHHHCCCc-EEE
Confidence 99999999999989999999999973 444
No 112
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.32 E-value=0.00048 Score=58.81 Aligned_cols=85 Identities=21% Similarity=0.227 Sum_probs=59.7
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
++||+|+|+ |.+|+.+++.+.++ ++++++... .. + .++. ..| ++++. +.+++ .+
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~----p~--~---------~g~~--~~G--~~vy~--sl~el---~~ 61 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVT----PG--K---------GGTT--HLG--LPVFN--TVREA---VA 61 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEEC----TT--C---------TTCE--ETT--EEEES--SHHHH---HH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeC----CC--c---------ccce--eCC--eeccC--CHHHH---hh
Confidence 579999999 99999999999887 477554321 10 0 0111 123 44442 33333 23
Q ss_pred --CCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 --GAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 --~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
++|+++.|+|+....+.+.+++++|++.+|+
T Consensus 62 ~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 62 ATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 7999999999999999999999999986554
No 113
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.31 E-value=2.5e-05 Score=70.69 Aligned_cols=89 Identities=17% Similarity=0.174 Sum_probs=60.0
Q ss_pred CcEEEEEcc----CHHHHHHHHHHHcC-CCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCC
Q 025368 3 KVKIGINGF----GRIGRLVARVILQR-DDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIP 77 (254)
Q Consensus 3 ~~~V~IvG~----G~~G~~l~~~L~~~-p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~ 77 (254)
++||||+|+ |.+|...++.|.++ |+++++++.....+. ...+ ...-| ...+..+ .+.+++-
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~-~~~~-----a~~~g------~~~~~~~--~~~~~ll 85 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIET-SIAT-----IQRLK------LSNATAF--PTLESFA 85 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHH-HHHH-----HHHTT------CTTCEEE--SSHHHHH
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHH-HHHH-----HHHcC------CCcceee--CCHHHHh
Confidence 589999999 99999999999999 899999987653211 0000 00001 0001232 2333331
Q ss_pred cccCCCcEEEEecCCccCHHHHHHHHHCC
Q 025368 78 WAETGAEYVVESTGVFTDKDKAAAHLKGG 106 (254)
Q Consensus 78 ~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G 106 (254)
...++|+|+.|+|+....+.+..++++|
T Consensus 86 -~~~~vD~V~i~tp~~~H~~~~~~al~aG 113 (438)
T 3btv_A 86 -SSSTIDMIVIAIQVASHYEVVMPLLEFS 113 (438)
T ss_dssp -HCSSCSEEEECSCHHHHHHHHHHHHHHG
T ss_pred -cCCCCCEEEEeCCcHHHHHHHHHHHHCC
Confidence 1136899999999998899999999999
No 114
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.30 E-value=0.00015 Score=59.16 Aligned_cols=92 Identities=15% Similarity=0.315 Sum_probs=59.0
Q ss_pred CcEEEEEccCHHHHHHHHHHH-cCCCceeEEeeeeeecccccc-ccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 3 KVKIGINGFGRIGRLVARVIL-QRDDVELVATYMFKYDSVHGQ-WKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~-~~p~~~v~~~~~~~~~s~~g~-~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
+.||+|+|+|..|+.|++.+. ++.+++++++.........|+ . ++| ++++...+.+++- ..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~--------------i~G--vpV~~~~dL~~~v-~~ 146 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTT--------------EDG--IPVYGISTINDHL-ID 146 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBC--------------TTC--CBEEEGGGHHHHC--C
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCcee--------------ECC--eEEeCHHHHHHHH-HH
Confidence 469999999999999999743 345688888764310001111 1 123 3333222222220 12
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCCeEE
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVI 111 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~v 111 (254)
.++|+++.|+|+....+.++.+.++|++.++
T Consensus 147 ~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~ 177 (212)
T 3keo_A 147 SDIETAILTVPSTEAQEVADILVKAGIKGIL 177 (212)
T ss_dssp CSCCEEEECSCGGGHHHHHHHHHHHTCCEEE
T ss_pred cCCCEEEEecCchhHHHHHHHHHHcCCCEEE
Confidence 4699999999998888889999999997554
No 115
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.30 E-value=4.9e-05 Score=68.28 Aligned_cols=92 Identities=25% Similarity=0.282 Sum_probs=58.2
Q ss_pred CCCcEEEEEccCH---HHHHHHHHHHcCCCceeEE-eeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCC
Q 025368 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-TYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEI 76 (254)
Q Consensus 1 M~~~~V~IvG~G~---~G~~l~~~L~~~p~~~v~~-~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~ 76 (254)
|.++||||+|+|. +|+..++.+...+++++++ +.....+. ...+ .. .+ +-....++ .|.+++
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~-a~~~-----a~----~~--g~~~~~~~--~~~~~l 100 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEK-AEAS-----GR----EL--GLDPSRVY--SDFKEM 100 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHH-HHHH-----HH----HH--TCCGGGBC--SCHHHH
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHH-HHHH-----HH----Hc--CCCccccc--CCHHHH
Confidence 4468999999998 9999999998888899986 65442110 0000 00 00 00000111 222333
Q ss_pred Cccc-----CCCcEEEEecCCccCHHHHHHHHHCCC
Q 025368 77 PWAE-----TGAEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 77 ~~~~-----~~~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
- .. .++|+|+.|+|+....+++.+++++|+
T Consensus 101 l-~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGk 135 (417)
T 3v5n_A 101 A-IREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGI 135 (417)
T ss_dssp H-HHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTC
T ss_pred H-hcccccCCCCcEEEECCCcHHHHHHHHHHHhCCC
Confidence 0 11 358999999999999999999999997
No 116
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=97.24 E-value=0.00014 Score=64.10 Aligned_cols=34 Identities=21% Similarity=0.252 Sum_probs=29.5
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCC---CceeEEeee
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRD---DVELVATYM 35 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p---~~~v~~~~~ 35 (254)
+++||||+|+|.+|+.+++.|.+++ +++++++..
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d 39 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAE 39 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEEC
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEE
Confidence 4589999999999999999999886 578888764
No 117
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.15 E-value=4.8e-05 Score=62.30 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=28.0
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeee
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMF 36 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~ 36 (254)
|+|+||+|+|+|++|..+++.|.+.. +++..++.+
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g-~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQ-IPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTT-CCEEEECTT
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECC
Confidence 55789999999999999999998874 666554433
No 118
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.15 E-value=0.00067 Score=54.89 Aligned_cols=96 Identities=19% Similarity=0.152 Sum_probs=54.8
Q ss_pred CC-CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeec--CCCCCC
Q 025368 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV--RNPEEI 76 (254)
Q Consensus 1 M~-~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~--~~~~~~ 76 (254)
|+ |+||.|.|+ |++|+.+++.|.++. .++..+.-.. . +. . .+. .+ +.++.. .|++++
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~-~----~~-----~-----~~~-~~--~~~~~~Dl~d~~~~ 61 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHP-E----KI-----K-----IEN-EH--LKVKKADVSSLDEV 61 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCG-G----GC-----C-----CCC-TT--EEEECCCTTCHHHH
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCc-c----cc-----h-----hcc-Cc--eEEEEecCCCHHHH
Confidence 54 579999999 999999999999885 6665543211 1 00 0 000 11 222221 122222
Q ss_pred CcccCCCcEEEEecCCcc------------CHHHHHHHHHCCCCeEEe-cCC
Q 025368 77 PWAETGAEYVVESTGVFT------------DKDKAAAHLKGGAKKVII-SAP 115 (254)
Q Consensus 77 ~~~~~~~Dvv~~a~~~~~------------s~~~~~~~~~~G~~~~vi-S~~ 115 (254)
.-..+++|+||.|++... +...++.+.+.|.+++|. |..
T Consensus 62 ~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 113 (227)
T 3dhn_A 62 CEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA 113 (227)
T ss_dssp HHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred HHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence 112357999999987642 233456677788877775 543
No 119
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.09 E-value=0.0016 Score=49.22 Aligned_cols=82 Identities=17% Similarity=0.270 Sum_probs=57.8
Q ss_pred CcEEEEEcc----CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCc
Q 025368 3 KVKIGINGF----GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPW 78 (254)
Q Consensus 3 ~~~V~IvG~----G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 78 (254)
..+|+|+|+ |.+|..+++.|.+.. +++..+. .. .. .+ .| .+++ .+++++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G-~~V~~vn-----p~------------~~-~i--~G--~~~~--~s~~el-- 66 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVN-----PN------------YD-EI--EG--LKCY--RSVREL-- 66 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEEC-----TT------------CS-EE--TT--EECB--SSGGGS--
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCC-CEEEEeC-----CC------------CC-eE--CC--eeec--CCHHHh--
Confidence 469999999 999999999998874 6632221 10 00 11 23 3343 244555
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
.+.+|+|+.|+|.....+.+..+.++|++.+++
T Consensus 67 -~~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~ 99 (138)
T 1y81_A 67 -PKDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWF 99 (138)
T ss_dssp -CTTCCEEEECSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred -CCCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 257999999999887888888888999987766
No 120
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.05 E-value=0.00024 Score=61.45 Aligned_cols=86 Identities=16% Similarity=0.168 Sum_probs=56.1
Q ss_pred cEEEEEccCHHHHHH-HHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 4 VKIGINGFGRIGRLV-ARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l-~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
+||||+|+|.+|+.. ++.|.+ ++++++++.....+. ...+ ...-| . ...+ .+.+++ ....+
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~-~~~~-----~~~~g------~--~~~~--~~~~~~-l~~~~ 62 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAER-GAAY-----ATENG------I--GKSV--TSVEEL-VGDPD 62 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHH-HHHH-----HHHTT------C--SCCB--SCHHHH-HTCTT
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHH-HHHH-----HHHcC------C--Cccc--CCHHHH-hcCCC
Confidence 499999999999998 888888 889998887643211 0000 00001 0 0111 222222 00136
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCC
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
+|+|+.|+|+....+.+..++++|+
T Consensus 63 ~D~V~i~tp~~~h~~~~~~al~~Gk 87 (332)
T 2glx_A 63 VDAVYVSTTNELHREQTLAAIRAGK 87 (332)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCEEEEeCChhHhHHHHHHHHHCCC
Confidence 8999999999988899999999996
No 121
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.03 E-value=0.0012 Score=56.30 Aligned_cols=85 Identities=15% Similarity=0.225 Sum_probs=59.5
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
.+||+|+|+ |..|+.+++.+.++ ++++++..- +.. .++. ..| ++++. +.+++ .+
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~Vn----P~~-----------~g~~--i~G--~~vy~--sl~el---~~ 61 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVT----PGK-----------GGME--VLG--VPVYD--TVKEA---VA 61 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEEC----TTC-----------TTCE--ETT--EEEES--SHHHH---HH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEEC----CCC-----------CCce--ECC--EEeeC--CHHHH---hh
Confidence 479999999 99999999998887 577543221 100 0111 123 45542 23333 13
Q ss_pred --CCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 --GAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 --~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
++|+++.++|+....+.+.++.++|++.+|+
T Consensus 62 ~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 62 HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 7999999999999999999999999985554
No 122
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.02 E-value=0.0039 Score=52.17 Aligned_cols=90 Identities=12% Similarity=-0.016 Sum_probs=53.2
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
||+||.|.|+|++|+.|++.|.++. .++..+. +.. +....+ . .. + +..+. .|..+++ ..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~-r~~-~~~~~~-----~-~~-------~--~~~~~-~D~~d~~--~~ 62 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQG-WRIIGTS-RNP-DQMEAI-----R-AS-------G--AEPLL-WPGEEPS--LD 62 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGT-CEEEEEE-SCG-GGHHHH-----H-HT-------T--EEEEE-SSSSCCC--CT
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCC-CEEEEEE-cCh-hhhhhH-----h-hC-------C--CeEEE-ecccccc--cC
Confidence 3579999999999999999999884 6766653 211 100000 0 11 1 22222 2333333 36
Q ss_pred CCcEEEEecCCcc-----CHHHHHHHHH--CCCCeEEe
Q 025368 82 GAEYVVESTGVFT-----DKDKAAAHLK--GGAKKVII 112 (254)
Q Consensus 82 ~~Dvv~~a~~~~~-----s~~~~~~~~~--~G~~~~vi 112 (254)
++|+||.|++... ....++.+.+ .|++++|.
T Consensus 63 ~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~ 100 (286)
T 3ius_A 63 GVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGY 100 (286)
T ss_dssp TCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEE
T ss_pred CCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEE
Confidence 8999999987642 2334555556 57776664
No 123
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=97.00 E-value=0.00056 Score=57.56 Aligned_cols=93 Identities=15% Similarity=0.117 Sum_probs=54.7
Q ss_pred EEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCCC
Q 025368 5 KIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGA 83 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (254)
||.|.|+ |++|+.+++.|.+.+..++..+. +.. +....+ . .. +.........|++.+.-...++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~-R~~-~~~~~~-----~-~~-------~v~~~~~D~~d~~~l~~~~~~~ 66 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGV-RNV-EKVPDD-----W-RG-------KVSVRQLDYFNQESMVEAFKGM 66 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEE-SSG-GGSCGG-----G-BT-------TBEEEECCTTCHHHHHHHTTTC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEE-CCH-HHHHHh-----h-hC-------CCEEEEcCCCCHHHHHHHHhCC
Confidence 8999999 99999999999887567776653 211 110000 0 11 1111111112333232224689
Q ss_pred cEEEEecCCcc--------CHHHHHHHHHCCCCeEEe
Q 025368 84 EYVVESTGVFT--------DKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 84 Dvv~~a~~~~~--------s~~~~~~~~~~G~~~~vi 112 (254)
|+||.+++... +...++.+.++|++++|.
T Consensus 67 d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~ 103 (289)
T 3e48_A 67 DTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIF 103 (289)
T ss_dssp SEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEE
Confidence 99999988632 244567777889877775
No 124
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.96 E-value=0.001 Score=52.66 Aligned_cols=32 Identities=28% Similarity=0.292 Sum_probs=27.1
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|+.++|.|.|+ |++|+.+++.|.++. .++..+
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~ 33 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAG-YEVTVL 33 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEE
Confidence 66679999999 999999999999885 666554
No 125
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.95 E-value=0.00083 Score=56.47 Aligned_cols=33 Identities=30% Similarity=0.357 Sum_probs=27.4
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEee
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATY 34 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~ 34 (254)
|+|+||.|.|+|++|+.|++.|.++. .++..+.
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~ 33 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQG-HEVTGLR 33 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 77889999999999999999999884 5766553
No 126
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.95 E-value=0.0013 Score=57.30 Aligned_cols=34 Identities=32% Similarity=0.405 Sum_probs=28.3
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEee
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVATY 34 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~ 34 (254)
|+|+||.|.|+ |++|+.|++.|++.+..+|..+.
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~ 56 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMD 56 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEe
Confidence 56789999999 99999999999988557776654
No 127
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.91 E-value=0.0021 Score=51.76 Aligned_cols=91 Identities=25% Similarity=0.283 Sum_probs=54.8
Q ss_pred EEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEee--cCC-CCCCCccc
Q 025368 5 KIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG--VRN-PEEIPWAE 80 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~--~~~-~~~~~~~~ 80 (254)
||.|.|+ |++|+.+++.|.++. .++..+. +..+ +. . .+ .+ +.++. ..| ++++.-..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~-R~~~----~~-----~-----~~--~~--~~~~~~D~~d~~~~~~~~~ 61 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD-YQIYAGA-RKVE----QV-----P-----QY--NN--VKAVHFDVDWTPEEMAKQL 61 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS-CEEEEEE-SSGG----GS-----C-----CC--TT--EEEEECCTTSCHHHHHTTT
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEE-CCcc----ch-----h-----hc--CC--ceEEEecccCCHHHHHHHH
Confidence 8999999 999999999999884 6765543 2111 00 0 00 11 22222 122 22221123
Q ss_pred CCCcEEEEecCCcc----------CHHHHHHHHHCCCCeEEe-cCC
Q 025368 81 TGAEYVVESTGVFT----------DKDKAAAHLKGGAKKVII-SAP 115 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~----------s~~~~~~~~~~G~~~~vi-S~~ 115 (254)
+++|+||.+++... +...++.+.+.|.+++|. |..
T Consensus 62 ~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 107 (219)
T 3dqp_A 62 HGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTI 107 (219)
T ss_dssp TTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred cCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence 68999999998643 345667777888876664 543
No 128
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.89 E-value=0.00025 Score=62.73 Aligned_cols=90 Identities=11% Similarity=0.077 Sum_probs=55.6
Q ss_pred CCCcEEEEEc-cCHHHHH-HH----HHHHcCCCceeE---------EeeeeeeccccccccccceeecCCeeEEECCEEE
Q 025368 1 MGKVKIGING-FGRIGRL-VA----RVILQRDDVELV---------ATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 65 (254)
Q Consensus 1 M~~~~V~IvG-~G~~G~~-l~----~~L~~~p~~~v~---------~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~ 65 (254)
|+++||||+| +|.+|.. .+ +.+.+.+.++++ ++..+..+. ...+ ...- +. .
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~-a~~~-----a~~~-------~~-~ 69 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEK-VEAL-----AKRF-------NI-A 69 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHH-HHHH-----HHHT-------TC-C
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHH-HHHH-----HHHh-------CC-C
Confidence 4458999999 5999997 66 788887766654 243321110 0000 0000 10 0
Q ss_pred EEeecCCCCCCCcccCCCcEEEEecCCccCHHHHHHHHHCCC
Q 025368 66 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
.++ .|.+++- ...++|+|+.|+|+....+++.+++++|+
T Consensus 70 ~~~--~~~~~ll-~~~~iD~V~i~tp~~~h~~~~~~al~~Gk 108 (383)
T 3oqb_A 70 RWT--TDLDAAL-ADKNDTMFFDAATTQARPGLLTQAINAGK 108 (383)
T ss_dssp CEE--SCHHHHH-HCSSCCEEEECSCSSSSHHHHHHHHTTTC
T ss_pred ccc--CCHHHHh-cCCCCCEEEECCCchHHHHHHHHHHHCCC
Confidence 122 2333331 11468999999999999999999999997
No 129
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.86 E-value=0.00081 Score=56.21 Aligned_cols=87 Identities=15% Similarity=0.161 Sum_probs=51.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
++||+|+|+|.+|..+.+.|.+.. ++++.++.+..+. ..++ ...- + +... .++++. ..+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g-~~~v~~~~~~~~~-~~~~-----~~~~-------g--~~~~--~~~~~~---~~~ 68 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKG-FRIVQVYSRTEES-AREL-----AQKV-------E--AEYT--TDLAEV---NPY 68 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHT-CCEEEEECSSHHH-HHHH-----HHHT-------T--CEEE--SCGGGS---CSC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCC-CeEEEEEeCCHHH-HHHH-----HHHc-------C--Ccee--CCHHHH---hcC
Confidence 369999999999999999998774 6655555432110 0000 0000 1 1222 233333 357
Q ss_pred CcEEEEecCCccCHHHHHHHHH---CCCCeEEe
Q 025368 83 AEYVVESTGVFTDKDKAAAHLK---GGAKKVII 112 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~---~G~~~~vi 112 (254)
+|+||.|+|.....+.++.+.+ .|. +++
T Consensus 69 ~Dvvi~av~~~~~~~v~~~l~~~~~~~~--ivv 99 (266)
T 3d1l_A 69 AKLYIVSLKDSAFAELLQGIVEGKREEA--LMV 99 (266)
T ss_dssp CSEEEECCCHHHHHHHHHHHHTTCCTTC--EEE
T ss_pred CCEEEEecCHHHHHHHHHHHHhhcCCCc--EEE
Confidence 9999999998765666655543 454 555
No 130
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=96.85 E-value=0.00068 Score=57.46 Aligned_cols=84 Identities=15% Similarity=0.071 Sum_probs=49.2
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCC-CceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcc
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRD-DVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 79 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p-~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 79 (254)
|+++||+|+|+|++|..+.+.|.++. ..++.. +.+..+ +. .... ..| ...... .++++.
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~~~~----~~--~~~~-~~g-------~~~~~~--~~~~~~--- 63 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVG-YNRSDR----SR--DIAL-ERG-------IVDEAT--ADFKVF--- 63 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEE-ECSSHH----HH--HHHH-HTT-------SCSEEE--SCTTTT---
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEE-EcCCHH----HH--HHHH-HcC-------Cccccc--CCHHHh---
Confidence 66789999999999999999988663 355432 222100 00 0000 111 000111 234333
Q ss_pred cCCCcEEEEecCCccCHHHHHHHHH
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHLK 104 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~~ 104 (254)
..++|+||.|+|.....+.++.+..
T Consensus 64 ~~~aDvVilavp~~~~~~v~~~l~~ 88 (290)
T 3b1f_A 64 AALADVIILAVPIKKTIDFIKILAD 88 (290)
T ss_dssp GGGCSEEEECSCHHHHHHHHHHHHT
T ss_pred hcCCCEEEEcCCHHHHHHHHHHHHh
Confidence 3579999999998776666666543
No 131
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.82 E-value=0.00089 Score=54.09 Aligned_cols=97 Identities=22% Similarity=0.154 Sum_probs=53.4
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHH-cCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEee--cCCCCCC
Q 025368 1 MGKVKIGINGF-GRIGRLVARVIL-QRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG--VRNPEEI 76 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~-~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~--~~~~~~~ 76 (254)
|||.+|.|.|+ |.+|+.+++.|+ +. ..++..+. +..+ .+.. .+. ..+ .+ +..+. ..|++++
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~-r~~~---~~~~--~~~-~~~-----~~--~~~~~~D~~d~~~~ 67 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYT-DMHITLYG-RQLK---TRIP--PEI-IDH-----ER--VTVIEGSFQNPGXL 67 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHC-CCEEEEEE-SSHH---HHSC--HHH-HTS-----TT--EEEEECCTTCHHHH
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcC-CceEEEEe-cCcc---ccch--hhc-cCC-----Cc--eEEEECCCCCHHHH
Confidence 34456999999 999999999999 55 46765543 2111 0100 000 011 01 22221 1222222
Q ss_pred CcccCCCcEEEEecCCc--cCHHHHHHHHHCCCCeEEe
Q 025368 77 PWAETGAEYVVESTGVF--TDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 77 ~~~~~~~Dvv~~a~~~~--~s~~~~~~~~~~G~~~~vi 112 (254)
.-..+++|+||.+++.. .++..++.+.+.|.+++|.
T Consensus 68 ~~~~~~~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~ 105 (221)
T 3r6d_A 68 EQAVTNAEVVFVGAMESGSDMASIVKALSRXNIRRVIG 105 (221)
T ss_dssp HHHHTTCSEEEESCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHcCCCEEEEcCCCCChhHHHHHHHHHhcCCCeEEE
Confidence 11236899999998752 1455566677788766664
No 132
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=96.81 E-value=0.00013 Score=61.71 Aligned_cols=77 Identities=13% Similarity=-0.012 Sum_probs=40.0
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
|+||+|+|+|.+|..+.+.|.++ +++..++.+..+. ..++ . . .+ + . .. .+++++ ..+
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~~~~~-~~~~-----~-~---~~---g--~-~~--~~~~~~---~~~ 58 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR--YEIGYILSRSIDR-ARNL-----A-E---VY---G--G-KA--ATLEKH---PEL 58 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC------CCCEECSSHHH-HHHH-----H-H---HT---C--C-CC--CSSCCC---CC-
T ss_pred CceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeCCHHH-HHHH-----H-H---Hc---C--C-cc--CCHHHH---Hhc
Confidence 46999999999999999988766 5654444332110 0000 0 0 00 1 1 11 234443 257
Q ss_pred CcEEEEecCCccCHHHHHHH
Q 025368 83 AEYVVESTGVFTDKDKAAAH 102 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~ 102 (254)
+|+||.|+|.....+.++.+
T Consensus 59 ~DvVilav~~~~~~~v~~~l 78 (276)
T 2i76_A 59 NGVVFVIVPDRYIKTVANHL 78 (276)
T ss_dssp --CEEECSCTTTHHHHHTTT
T ss_pred CCEEEEeCChHHHHHHHHHh
Confidence 99999999998765555443
No 133
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.80 E-value=0.0031 Score=54.31 Aligned_cols=89 Identities=15% Similarity=0.092 Sum_probs=51.4
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCc-eeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCC-CCcc
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDV-ELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEE-IPWA 79 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~-~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~-~~~~ 79 (254)
+++||+|+|+|.+|..+.+.|.+.... ++.. +.+..+ +.. . ....| ...... .++++ .
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~-~dr~~~----~~~--~-a~~~G-------~~~~~~--~~~~~~~--- 91 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-YDINPE----SIS--K-AVDLG-------IIDEGT--TSIAKVE--- 91 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEE-ECSCHH----HHH--H-HHHTT-------SCSEEE--SCTTGGG---
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEE-EECCHH----HHH--H-HHHCC-------Ccchhc--CCHHHHh---
Confidence 347999999999999999999877421 4432 222110 000 0 00111 000111 34444 2
Q ss_pred cCCCcEEEEecCCccCHHHHHHHH---HCCCCeEEe
Q 025368 80 ETGAEYVVESTGVFTDKDKAAAHL---KGGAKKVII 112 (254)
Q Consensus 80 ~~~~Dvv~~a~~~~~s~~~~~~~~---~~G~~~~vi 112 (254)
..++|+||.|+|.....+.++.+. ..|+ +|+
T Consensus 92 ~~~aDvVilavp~~~~~~vl~~l~~~l~~~~--iv~ 125 (314)
T 3ggo_A 92 DFSPDFVMLSSPVRTFREIAKKLSYILSEDA--TVT 125 (314)
T ss_dssp GGCCSEEEECSCGGGHHHHHHHHHHHSCTTC--EEE
T ss_pred hccCCEEEEeCCHHHHHHHHHHHhhccCCCc--EEE
Confidence 368999999999987666665544 3455 555
No 134
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=96.79 E-value=0.0037 Score=47.63 Aligned_cols=84 Identities=17% Similarity=0.157 Sum_probs=57.8
Q ss_pred CcEEEEEcc----CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCc
Q 025368 3 KVKIGINGF----GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPW 78 (254)
Q Consensus 3 ~~~V~IvG~----G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 78 (254)
+.+|+|+|+ |.+|..+++.|.+.. +++..+ . .. ..|+.+ .| .+++ .++++++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~v---n--p~-----------~~g~~i--~G--~~~~--~sl~el~- 68 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPV---S--PK-----------VAGKTL--LG--QQGY--ATLADVP- 68 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEE---C--SS-----------STTSEE--TT--EECC--SSTTTCS-
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEe---C--Cc-----------cccccc--CC--eecc--CCHHHcC-
Confidence 468999999 789999999998875 663222 1 10 001121 23 3443 3455663
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
+.+|+|+.|+|.....+.+..+.++|++.+++
T Consensus 69 --~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i 100 (145)
T 2duw_A 69 --EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWL 100 (145)
T ss_dssp --SCCSEEECCSCSTHHHHHHHHHHHHTCCEEEC
T ss_pred --CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 57999999999888888888888899887766
No 135
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.78 E-value=0.0043 Score=47.21 Aligned_cols=82 Identities=18% Similarity=0.157 Sum_probs=58.0
Q ss_pred CcEEEEEcc----CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCc
Q 025368 3 KVKIGINGF----GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPW 78 (254)
Q Consensus 3 ~~~V~IvG~----G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 78 (254)
..+|+|+|+ |..|..+++.|.++. +++..+. .. ++.+ .| ++++ .+.++++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vn-----p~-------------~~~i--~G--~~~y--~sl~~l~- 75 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHG-YDVYPVN-----PK-------------YEEV--LG--RKCY--PSVLDIP- 75 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEEC-----TT-------------CSEE--TT--EECB--SSGGGCS-
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEEC-----CC-------------CCeE--CC--eecc--CCHHHcC-
Confidence 468999999 689999999998875 6632221 10 0011 23 3443 2345552
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
+.+|+++.|+|.....+.++.+.++|++.+++
T Consensus 76 --~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~ 107 (144)
T 2d59_A 76 --DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWF 107 (144)
T ss_dssp --SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred --CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 47999999999988888999999999987766
No 136
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.75 E-value=0.0013 Score=57.03 Aligned_cols=103 Identities=18% Similarity=0.100 Sum_probs=56.5
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccc-cceeecCCeeEEECCEEEEEee--cCCCCCC
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKH-HELKVKDDKTLLFGEKPVTVFG--VRNPEEI 76 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~-~~v~~~~g~~l~~~~~~~~~~~--~~~~~~~ 76 (254)
|++++|.|.|+ |++|+.|++.|++++ .++..+. +...+...+... .... ..+ +.++. ..|.+++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~-R~~~~~~~~~~~~~~l~-~~~---------v~~~~~Dl~d~~~l 75 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILA-RPGPRSPSKAKIFKALE-DKG---------AIIVYGLINEQEAM 75 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEE-CSSCCCHHHHHHHHHHH-HTT---------CEEEECCTTCHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEE-CCCCCChhHHHHHHHHH-hCC---------cEEEEeecCCHHHH
Confidence 44579999999 999999999999886 6665543 211000000000 0000 011 11211 1122222
Q ss_pred CcccC--CCcEEEEecCCc---cCHHHHHHHHHCC-CCeEEecCC
Q 025368 77 PWAET--GAEYVVESTGVF---TDKDKAAAHLKGG-AKKVIISAP 115 (254)
Q Consensus 77 ~~~~~--~~Dvv~~a~~~~---~s~~~~~~~~~~G-~~~~viS~~ 115 (254)
..... ++|+||.+++.. .+...++.+.++| +++++.|..
T Consensus 76 ~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~ 120 (346)
T 3i6i_A 76 EKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEF 120 (346)
T ss_dssp HHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSCC
T ss_pred HHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeeccc
Confidence 21234 899999998862 3456677778888 887776543
No 137
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=96.75 E-value=0.00099 Score=56.49 Aligned_cols=26 Identities=19% Similarity=0.289 Sum_probs=23.0
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCC
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
|+++||+|+|+|.+|..+++.|.++.
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g 26 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANG 26 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCC
Confidence 77789999999999999999998774
No 138
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.70 E-value=0.003 Score=53.96 Aligned_cols=85 Identities=19% Similarity=0.257 Sum_probs=58.9
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
..+++|+|+ |..|+.+++.+.++ ++++++... +. + .++. +.| ++++. +.+++ .+
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~-g~~~V~~Vn----P~--~---------~g~~--i~G--~~vy~--sl~el---~~ 67 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLEC-GTKIVGGVT----PG--K---------GGQN--VHG--VPVFD--TVKEA---VK 67 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHT-TCCEEEEEC----TT--C---------TTCE--ETT--EEEES--SHHHH---HH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCeEEEEeC----CC--C---------CCce--ECC--EeeeC--CHHHH---hh
Confidence 368899999 99999999999987 476443221 10 0 0111 123 45542 33333 23
Q ss_pred --CCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 --GAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 --~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
++|+++.++|+....+.+.++.++|++.+|+
T Consensus 68 ~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 68 ETDANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 7999999999999999999999999985554
No 139
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.69 E-value=0.005 Score=52.26 Aligned_cols=89 Identities=13% Similarity=0.109 Sum_probs=52.2
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCC--CCCCc
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNP--EEIPW 78 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~--~~~~~ 78 (254)
||+||.|.|+ |++|+.|++.|.++. .++..+.-. .+ . . .+ .+ +.++. .|. +.+.-
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~--~~---~------~-----~~--~~--~~~~~-~Dl~~~~~~~ 58 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDG-NTPIILTRS--IG---N------K-----AI--ND--YEYRV-SDYTLEDLIN 58 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC--CC---------------------C--CEEEE-CCCCHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCC--CC---c------c-----cC--Cc--eEEEE-ccccHHHHHH
Confidence 2479999999 999999999999885 566554311 10 0 0 00 01 11111 111 11111
Q ss_pred ccCCCcEEEEecCCcc--------------CHHHHHHHHHCCCCeEEe
Q 025368 79 AETGAEYVVESTGVFT--------------DKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~--------------s~~~~~~~~~~G~~~~vi 112 (254)
...++|+||.|++... +...++.+.+.|++++|.
T Consensus 59 ~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~ 106 (311)
T 3m2p_A 59 QLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVY 106 (311)
T ss_dssp HTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 1358999999987532 245567777889886664
No 140
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=96.68 E-value=0.0046 Score=52.93 Aligned_cols=85 Identities=16% Similarity=0.244 Sum_probs=58.5
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
..+|+|+|+ |..|+.+++.|.++ ++++++... +.. .++. +.| ++++. +.++++ +
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~Vn----P~~-----------~g~~--i~G--~~vy~--sl~el~---~ 67 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVT----PGK-----------GGSE--VHG--VPVYD--SVKEAL---A 67 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEEC----TTC-----------TTCE--ETT--EEEES--SHHHHH---H
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeC----CCC-----------CCce--ECC--EeeeC--CHHHHh---h
Confidence 468999999 99999999999887 577443221 100 0111 123 45542 333331 2
Q ss_pred --C-CcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 --G-AEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 --~-~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
+ +|+++.++|+....+.+.++.++|++.+|+
T Consensus 68 ~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi 101 (297)
T 2yv2_A 68 EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVV 101 (297)
T ss_dssp HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 4 899999999999999999999999985554
No 141
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=96.67 E-value=0.0035 Score=47.01 Aligned_cols=93 Identities=18% Similarity=0.143 Sum_probs=57.8
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
.+.|+.|+|+|..|+++++.|.+++.++++++.... . . ..|+. +.| ++++...+..++ ....
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~--~--~---------~~g~~--i~g--~pV~g~~~l~~~-~~~~ 64 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDD--R--K---------KHKTT--MQG--ITIYRPKYLERL-IKKH 64 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSC--G--G---------GTTCE--ETT--EEEECGGGHHHH-HHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECC--c--c---------cCCCE--ecC--eEEECHHHHHHH-HHHC
Confidence 357999999999999999999988888888775421 1 0 01111 233 344321111111 0113
Q ss_pred CCcEEEEecCCccC---HHHHHHHHHCCCCeEEe
Q 025368 82 GAEYVVESTGVFTD---KDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s---~~~~~~~~~~G~~~~vi 112 (254)
++|.|+.|.|.... .+.+..+.+.|++..++
T Consensus 65 ~id~viia~~~~~~~~~~~i~~~l~~~gv~v~~v 98 (141)
T 3nkl_A 65 CISTVLLAVPSASQVQKKVIIESLAKLHVEVLTI 98 (141)
T ss_dssp TCCEEEECCTTSCHHHHHHHHHHHHTTTCEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHHHHHcCCeEEEC
Confidence 68999999986543 45667788889854444
No 142
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.62 E-value=0.0059 Score=45.17 Aligned_cols=84 Identities=17% Similarity=0.050 Sum_probs=59.9
Q ss_pred CcEEEEEcc----CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCc
Q 025368 3 KVKIGINGF----GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPW 78 (254)
Q Consensus 3 ~~~V~IvG~----G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 78 (254)
+.+|+|+|+ +..|..+++.|.++. +++..+.-. .+ . +.| .+.+ .+..+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~-----------------~~-~--i~G--~~~y--~sl~dlp- 57 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRK-----------------KG-E--VLG--KTII--NERPVIE- 57 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSS-----------------CS-E--ETT--EECB--CSCCCCT-
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCC-----------------CC-c--CCC--eecc--CChHHCC-
Confidence 468999998 568999999999885 565444211 00 1 123 2333 3456663
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe-cCC
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII-SAP 115 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi-S~~ 115 (254)
+ +|+|+.++|+....+.++++.+.|+|.+++ +++
T Consensus 58 --~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G~ 92 (122)
T 3ff4_A 58 --G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPGT 92 (122)
T ss_dssp --T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTTC
T ss_pred --C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 5 999999999999999999999999997666 444
No 143
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.62 E-value=0.0016 Score=55.13 Aligned_cols=102 Identities=18% Similarity=0.191 Sum_probs=57.4
Q ss_pred CC-CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccc--cccc--cccceeecCCeeEEECCEEEEEee--cCC
Q 025368 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSV--HGQW--KHHELKVKDDKTLLFGEKPVTVFG--VRN 72 (254)
Q Consensus 1 M~-~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~--~g~~--~~~~v~~~~g~~l~~~~~~~~~~~--~~~ 72 (254)
|+ |++|.|.|+ |.+|+.+++.|+++. .++..+. +...+. ..+. . ... ... + +.++. ..|
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~-R~~~~~~~~~~~~~~-~~l-~~~-------~--v~~v~~D~~d 67 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLG-HPTFLLV-RESTASSNSEKAQLL-ESF-KAS-------G--ANIVHGSIDD 67 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEEC-CCCCTTTTHHHHHHH-HHH-HTT-------T--CEEECCCTTC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEE-CCcccccCHHHHHHH-HHH-HhC-------C--CEEEEeccCC
Confidence 65 679999999 999999999999885 5655432 210000 0000 0 000 011 1 12221 112
Q ss_pred CCCCCcccCCCcEEEEecCCc---cCHHHHHHHHHCC-CCeEEecCC
Q 025368 73 PEEIPWAETGAEYVVESTGVF---TDKDKAAAHLKGG-AKKVIISAP 115 (254)
Q Consensus 73 ~~~~~~~~~~~Dvv~~a~~~~---~s~~~~~~~~~~G-~~~~viS~~ 115 (254)
++.+.-...++|+||.+++.. .....++.+.++| ++++|.|..
T Consensus 68 ~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~ 114 (308)
T 1qyc_A 68 HASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEF 114 (308)
T ss_dssp HHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCC
T ss_pred HHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceEeeccc
Confidence 222221235799999998853 3566677788888 887766544
No 144
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.59 E-value=0.0027 Score=53.80 Aligned_cols=102 Identities=14% Similarity=0.068 Sum_probs=57.1
Q ss_pred CC-CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccc-ccccccccee--ecCCeeEEECCEEEEEee--cCCC
Q 025368 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSV-HGQWKHHELK--VKDDKTLLFGEKPVTVFG--VRNP 73 (254)
Q Consensus 1 M~-~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~-~g~~~~~~v~--~~~g~~l~~~~~~~~~~~--~~~~ 73 (254)
|+ |++|.|.|+ |.+|+.+++.|+++. .++..+. +...+. ..+. ..+. ...+ +.++. ..|+
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~-R~~~~~~~~~~--~~~~~~~~~~---------~~~~~~D~~d~ 67 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLG-HPTYVLF-RPEVVSNIDKV--QMLLYFKQLG---------AKLIEASLDDH 67 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEEC-CSCCSSCHHHH--HHHHHHHTTT---------CEEECCCSSCH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEE-CCCcccchhHH--HHHHHHHhCC---------eEEEeCCCCCH
Confidence 65 679999999 999999999999875 6665543 210000 0000 0000 0111 11211 1222
Q ss_pred CCCCcccCCCcEEEEecCCc-------cCHHHHHHHHHCC-CCeEEecCC
Q 025368 74 EEIPWAETGAEYVVESTGVF-------TDKDKAAAHLKGG-AKKVIISAP 115 (254)
Q Consensus 74 ~~~~~~~~~~Dvv~~a~~~~-------~s~~~~~~~~~~G-~~~~viS~~ 115 (254)
+.+.-...++|+||.+++.. .+...++.+.++| ++++|.|..
T Consensus 68 ~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S~~ 117 (313)
T 1qyd_A 68 QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEF 117 (313)
T ss_dssp HHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCC
T ss_pred HHHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEecCC
Confidence 22221236899999998753 3455667778888 887765543
No 145
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=96.40 E-value=0.0041 Score=53.51 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=25.6
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCC-CceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRD-DVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p-~~~v~~~ 33 (254)
++||.|.|+ |++|+.|++.|+++. ++++..+
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~ 56 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINF 56 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEE
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEE
Confidence 579999999 999999999998763 4666554
No 146
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.39 E-value=0.0064 Score=46.00 Aligned_cols=84 Identities=11% Similarity=0.015 Sum_probs=58.1
Q ss_pred CcEEEEEcc----CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCc
Q 025368 3 KVKIGINGF----GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPW 78 (254)
Q Consensus 3 ~~~V~IvG~----G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 78 (254)
..+|+|+|+ |..|..+++.|.++. +++-.+. .. + .++.+ .| ++++ .+.++++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G-~~v~~vn-----p~--~---------~~~~i--~G--~~~~--~sl~el~- 68 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVN-----PR--F---------QGEEL--FG--EEAV--ASLLDLK- 68 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEEC-----GG--G---------TTSEE--TT--EECB--SSGGGCC-
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCC-CEEEEeC-----CC--c---------ccCcC--CC--EEec--CCHHHCC-
Confidence 368999999 789999999998885 6632221 10 0 01122 23 3443 2344552
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
+.+|+++.|+|.....+.++++.+.|++.+++
T Consensus 69 --~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~ 100 (140)
T 1iuk_A 69 --EPVDILDVFRPPSALMDHLPEVLALRPGLVWL 100 (140)
T ss_dssp --SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEE
T ss_pred --CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 57999999999988888888999999987777
No 147
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.36 E-value=0.0062 Score=52.47 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=26.8
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEee
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVATY 34 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~ 34 (254)
+++||.|.|+ |++|+.|++.|+++. .++..+.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 56 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLD 56 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEe
Confidence 4579999999 999999999999885 6766553
No 148
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=96.29 E-value=0.0023 Score=53.21 Aligned_cols=75 Identities=17% Similarity=0.211 Sum_probs=45.8
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCC---ceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCC
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDD---VELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIP 77 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~---~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~ 77 (254)
|+++||+|+|+|.+|..+.+.|.+... .++ .++.+. +. . .| +.+. .++++.
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v-~~~~~~----------------~~-~---~g--~~~~--~~~~~~- 55 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANANIIKKENL-FYYGPS----------------KK-N---TT--LNYM--SSNEEL- 55 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHTSSCGGGE-EEECSS----------------CC-S---SS--SEEC--SCHHHH-
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCCCCCeE-EEEeCC----------------cc-c---Cc--eEEe--CCHHHH-
Confidence 667899999999999999999886642 233 232221 00 0 01 1121 122221
Q ss_pred cccCCCcEEEEecCCccCHHHHHHHH
Q 025368 78 WAETGAEYVVESTGVFTDKDKAAAHL 103 (254)
Q Consensus 78 ~~~~~~Dvv~~a~~~~~s~~~~~~~~ 103 (254)
..++|+||.|+|.....+.++.+.
T Consensus 56 --~~~~D~vi~~v~~~~~~~v~~~l~ 79 (262)
T 2rcy_A 56 --ARHCDIIVCAVKPDIAGSVLNNIK 79 (262)
T ss_dssp --HHHCSEEEECSCTTTHHHHHHHSG
T ss_pred --HhcCCEEEEEeCHHHHHHHHHHHH
Confidence 246899999999876666665443
No 149
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.24 E-value=0.0011 Score=56.49 Aligned_cols=98 Identities=16% Similarity=0.061 Sum_probs=55.7
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEee--cCCCCCCCccc
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG--VRNPEEIPWAE 80 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~--~~~~~~~~~~~ 80 (254)
.+|.|.|+ |.+|+.+++.|+++. .++..+. +...+. .+.. ... ...+ +.++. ..|++++.-..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~-R~~~~~-~~~~-~~l-~~~~---------v~~v~~Dl~d~~~l~~a~ 77 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG-HPTYVFT-RPNSSK-TTLL-DEF-QSLG---------AIIVKGELDEHEKLVELM 77 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEE-CTTCSC-HHHH-HHH-HHTT---------CEEEECCTTCHHHHHHHH
T ss_pred CeEEEECCCchHHHHHHHHHHHCC-CcEEEEE-CCCCch-hhHH-HHh-hcCC---------CEEEEecCCCHHHHHHHH
Confidence 48999999 999999999999885 6665543 210000 0000 000 0111 11111 12222232223
Q ss_pred CCCcEEEEecCC---ccCHHHHHHHHHCC-CCeEEecCC
Q 025368 81 TGAEYVVESTGV---FTDKDKAAAHLKGG-AKKVIISAP 115 (254)
Q Consensus 81 ~~~Dvv~~a~~~---~~s~~~~~~~~~~G-~~~~viS~~ 115 (254)
.++|+||.+++. ..+...++.+.++| ++++|.|..
T Consensus 78 ~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~ 116 (318)
T 2r6j_A 78 KKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDF 116 (318)
T ss_dssp TTCSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSCC
T ss_pred cCCCEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeecc
Confidence 679999999874 23456677777788 887766543
No 150
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.16 E-value=0.006 Score=51.96 Aligned_cols=101 Identities=17% Similarity=0.071 Sum_probs=57.0
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeee-cccccccccccee--ecCCeeEEECCEEEEEee--cCCCCCC
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKY-DSVHGQWKHHELK--VKDDKTLLFGEKPVTVFG--VRNPEEI 76 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~-~s~~g~~~~~~v~--~~~g~~l~~~~~~~~~~~--~~~~~~~ 76 (254)
|++|.|.|+ |.+|+.+++.|+++. .++..+. +.. .+...... ..+. ... + +.++. ..|++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~-R~~~~~~~~~~~-~~l~~~~~~-------~--v~~v~~D~~d~~~l 71 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYA-RPLTPDSTPSSV-QLREEFRSM-------G--VTIIEGEMEEHEKM 71 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEE-CCCCTTCCHHHH-HHHHHHHHT-------T--CEEEECCTTCHHHH
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEE-CCcccccChHHH-HHHHHhhcC-------C--cEEEEecCCCHHHH
Confidence 468999999 999999999999875 6665543 211 00000000 0000 011 1 11111 1222223
Q ss_pred CcccCCCcEEEEecCC---ccCHHHHHHHHHCC-CCeEEecCC
Q 025368 77 PWAETGAEYVVESTGV---FTDKDKAAAHLKGG-AKKVIISAP 115 (254)
Q Consensus 77 ~~~~~~~Dvv~~a~~~---~~s~~~~~~~~~~G-~~~~viS~~ 115 (254)
.-...++|+||.|++. ..+...++.+.++| ++++|.|..
T Consensus 72 ~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~ 114 (321)
T 3c1o_A 72 VSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDF 114 (321)
T ss_dssp HHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECSCC
T ss_pred HHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEEecccc
Confidence 2223679999999875 34566777788888 887776543
No 151
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.16 E-value=0.0092 Score=47.61 Aligned_cols=90 Identities=17% Similarity=0.172 Sum_probs=51.1
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
|||.|.|+ |.+|+.+++.|+++. .++..+. +..+ +. .... .+ + ........|++. -...+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~-R~~~----~~--~~~~--~~--~-----~~~~~D~~d~~~--~~~~~ 61 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIV-RNAG----KI--TQTH--KD--I-----NILQKDIFDLTL--SDLSD 61 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-SCSH----HH--HHHC--SS--S-----EEEECCGGGCCH--HHHTT
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEE-cCch----hh--hhcc--CC--C-----eEEeccccChhh--hhhcC
Confidence 38999999 999999999999885 6766543 2111 00 0000 11 0 111111122222 12368
Q ss_pred CcEEEEecCCcc---------CHHHHHHHHHCCCCeEEe
Q 025368 83 AEYVVESTGVFT---------DKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 83 ~Dvv~~a~~~~~---------s~~~~~~~~~~G~~~~vi 112 (254)
+|+||.|++... +...++.+.+.|.+++|+
T Consensus 62 ~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~ 100 (221)
T 3ew7_A 62 QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLV 100 (221)
T ss_dssp CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEE
T ss_pred CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEE
Confidence 999999998632 244555666676666664
No 152
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.13 E-value=0.0033 Score=57.05 Aligned_cols=95 Identities=15% Similarity=0.192 Sum_probs=59.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCC---C-CCc
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPE---E-IPW 78 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~---~-~~~ 78 (254)
++||.|+|+|-+|+.++++|++|++++++.+.....+. .+.-. . +.+ |......+ .|.+ + +.-
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~-~~~~~----~----~~~---g~~~~~~~-Vdadnv~~~l~a 79 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEG-TKVDV----A----QQY---GVSFKLQQ-ITPQNYLEVIGS 79 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSC-CSCCH----H----HHH---TCEEEECC-CCTTTHHHHTGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccch-hhhhH----H----hhc---CCceeEEe-ccchhHHHHHHH
Confidence 36999999999999999999999988655544432211 11100 0 000 11122111 1122 1 210
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
.+.+.|+|+.+++...+...++.++++|+ -.+
T Consensus 80 Ll~~~DvVIN~s~~~~~l~Im~acleaGv--~Yl 111 (480)
T 2ph5_A 80 TLEENDFLIDVSIGISSLALIILCNQKGA--LYI 111 (480)
T ss_dssp GCCTTCEEEECCSSSCHHHHHHHHHHHTC--EEE
T ss_pred HhcCCCEEEECCccccCHHHHHHHHHcCC--CEE
Confidence 12345999999999999999999999999 555
No 153
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.13 E-value=0.027 Score=45.59 Aligned_cols=95 Identities=21% Similarity=0.226 Sum_probs=54.3
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEE-EEeecCCC-CCCCc
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV-TVFGVRNP-EEIPW 78 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~-~~~~~~~~-~~~~~ 78 (254)
+.++|.|.|+ |.+|+.+++.|+++. .++..+. +..+ +. ..+. ..+ + .++. .|. +.+.-
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~-R~~~----~~--~~~~-~~~---------~~~~~~-~Dl~~~~~~ 80 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG-HEPVAMV-RNEE----QG--PELR-ERG---------ASDIVV-ANLEEDFSH 80 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-SSGG----GH--HHHH-HTT---------CSEEEE-CCTTSCCGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC-CeEEEEE-CChH----HH--HHHH-hCC---------CceEEE-cccHHHHHH
Confidence 3579999999 999999999999885 6665543 2111 00 0000 111 1 1111 111 23322
Q ss_pred ccCCCcEEEEecCCcc--------------CHHHHHHHHHCCCCeEEe-cCC
Q 025368 79 AETGAEYVVESTGVFT--------------DKDKAAAHLKGGAKKVII-SAP 115 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~--------------s~~~~~~~~~~G~~~~vi-S~~ 115 (254)
...++|+||.+++... +...++.+.+.|.+++|. |..
T Consensus 81 ~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 132 (236)
T 3e8x_A 81 AFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV 132 (236)
T ss_dssp GGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred HHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 2468999999998642 233456666677766664 543
No 154
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=96.10 E-value=0.006 Score=52.48 Aligned_cols=33 Identities=24% Similarity=0.295 Sum_probs=25.7
Q ss_pred CC-CcEEEEEcc-CHHHHHHHHHHHcCC-CceeEEe
Q 025368 1 MG-KVKIGINGF-GRIGRLVARVILQRD-DVELVAT 33 (254)
Q Consensus 1 M~-~~~V~IvG~-G~~G~~l~~~L~~~p-~~~v~~~ 33 (254)
|+ |++|.|.|+ |++|+.|++.|+++. ..++..+
T Consensus 1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~ 36 (348)
T 1oc2_A 1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL 36 (348)
T ss_dssp --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 65 579999999 999999999998763 4676654
No 155
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.08 E-value=0.0071 Score=53.24 Aligned_cols=94 Identities=20% Similarity=0.182 Sum_probs=55.5
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
.+||+|+|+|++|+.+++.|.++ .++ .+..+..+. ...+ . .. ...+.+ ...+.+++.-...+
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~--~~V-~V~~R~~~~-a~~l-----a-~~-------~~~~~~-d~~~~~~l~~ll~~ 77 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDV-YIGDVNNEN-LEKV-----K-EF-------ATPLKV-DASNFDKLVEVMKE 77 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEE-EEEESCHHH-HHHH-----T-TT-------SEEEEC-CTTCHHHHHHHHTT
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC--CeE-EEEECCHHH-HHHH-----H-hh-------CCeEEE-ecCCHHHHHHHHhC
Confidence 36999999999999999999887 554 344332110 0000 0 00 111111 00111111111357
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCCCeEEecC
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 114 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~ 114 (254)
+|+|+.|+|.....+.+..++++|+..+++|.
T Consensus 78 ~DvVIn~~P~~~~~~v~~a~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 78 FELVIGALPGFLGFKSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp CSCEEECCCHHHHHHHHHHHHHTTCCEEECCC
T ss_pred CCEEEECCChhhhHHHHHHHHHhCCeEEEccC
Confidence 99999999987777778889999985444443
No 156
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.05 E-value=0.012 Score=53.77 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=26.8
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCc-eeEEe
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDV-ELVAT 33 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~-~v~~~ 33 (254)
+++||+|+|+||+|..+...|+++|.+ ++...
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~ 49 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGF 49 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEE
Confidence 457999999999999999999988556 76554
No 157
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.99 E-value=0.012 Score=47.75 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=25.5
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCc-eeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDV-ELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~-~v~~~ 33 (254)
.++|.|.|+ |.+|+.+++.|+++..+ ++..+
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~ 50 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLI 50 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEE
Confidence 468999999 99999999999988643 65544
No 158
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.98 E-value=0.0014 Score=55.34 Aligned_cols=31 Identities=26% Similarity=0.305 Sum_probs=25.9
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|.|+ |.+|+.+++.|.+++..++..+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~ 36 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVV 36 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEE
Confidence 479999999 9999999999998754666554
No 159
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=95.94 E-value=0.006 Score=51.53 Aligned_cols=84 Identities=15% Similarity=0.196 Sum_probs=49.9
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
|+||+|+|+ |.+|..+.+.|.++. +++. ++.+..+. ... +. .. | +.. .+..+. ..
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g-~~V~-~~~r~~~~-~~~-----~~-~~-------g--~~~---~~~~~~---~~ 66 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSA-HHLA-AIEIAPEG-RDR-----LQ-GM-------G--IPL---TDGDGW---ID 66 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSS-SEEE-EECCSHHH-HHH-----HH-HT-------T--CCC---CCSSGG---GG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEE-EEECCHHH-HHH-----HH-hc-------C--CCc---CCHHHH---hc
Confidence 469999999 999999999998874 5654 33221110 000 00 01 1 111 122222 35
Q ss_pred CCcEEEEecCCccCHHHHHHHHH---CCCCeEEe
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLK---GGAKKVII 112 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~---~G~~~~vi 112 (254)
++|+||.|+|.....+.++.+.. .|. +++
T Consensus 67 ~aDvVi~av~~~~~~~v~~~l~~~l~~~~--ivv 98 (286)
T 3c24_A 67 EADVVVLALPDNIIEKVAEDIVPRVRPGT--IVL 98 (286)
T ss_dssp TCSEEEECSCHHHHHHHHHHHGGGSCTTC--EEE
T ss_pred CCCEEEEcCCchHHHHHHHHHHHhCCCCC--EEE
Confidence 79999999998776666655442 354 555
No 160
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.92 E-value=0.0039 Score=53.59 Aligned_cols=27 Identities=26% Similarity=0.351 Sum_probs=23.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCce
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVE 29 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~ 29 (254)
++||+|+|+|++|..++..|...+.++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~ 28 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGD 28 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCe
Confidence 369999999999999999998876556
No 161
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.87 E-value=0.017 Score=49.40 Aligned_cols=86 Identities=14% Similarity=0.138 Sum_probs=46.2
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEE-EEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP-VTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~-~~~~~~~~~~~~~~~~~ 81 (254)
+|||+|+|+|.+|..+...|. . ..++..+ .+... ... .+. ..|-.+...+.. ..... .+.+. ..
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~-g~~V~~~-~r~~~-~~~-----~l~-~~G~~~~~~~~~~~~~~~-~~~~~----~~ 66 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L-YHDVTVV-TRRQE-QAA-----AIQ-SEGIRLYKGGEEFRADCS-ADTSI----NS 66 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEEEE-CSCHH-HHH-----HHH-HHCEEEEETTEEEEECCE-EESSC----CS
T ss_pred CCEEEEECCCHHHHHHHHHHh-c-CCceEEE-ECCHH-HHH-----HHH-hCCceEecCCCeeccccc-ccccc----cC
Confidence 479999999999999999988 4 3565443 22110 000 001 111111112211 11111 01111 25
Q ss_pred CCcEEEEecCCccCHHHHHHHH
Q 025368 82 GAEYVVESTGVFTDKDKAAAHL 103 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~ 103 (254)
.+|+||.|+++....+.++.+.
T Consensus 67 ~~D~vilavK~~~~~~~l~~l~ 88 (307)
T 3ego_A 67 DFDLLVVTVKQHQLQSVFSSLE 88 (307)
T ss_dssp CCSEEEECCCGGGHHHHHHHTT
T ss_pred CCCEEEEEeCHHHHHHHHHHhh
Confidence 7899999999887766666543
No 162
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.71 E-value=0.0089 Score=50.40 Aligned_cols=101 Identities=20% Similarity=0.140 Sum_probs=55.3
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccc-cc-ccee--ecCCeeEEECCEEEEEee--cCCCCC
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQW-KH-HELK--VKDDKTLLFGEKPVTVFG--VRNPEE 75 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~-~~-~~v~--~~~g~~l~~~~~~~~~~~--~~~~~~ 75 (254)
|++|.|.|+ |.+|+.+++.|+++. .++..+. +.. +..... .+ ..+. ...+ +.++. ..|++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~-R~~-~~~~~~~~~~~~~~~l~~~~---------v~~v~~D~~d~~~ 69 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG-NPTYALV-RKT-ITAANPETKEELIDNYQSLG---------VILLEGDINDHET 69 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT-CCEEEEE-CCS-CCSSCHHHHHHHHHHHHHTT---------CEEEECCTTCHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC-CcEEEEE-CCC-cccCChHHHHHHHHHHHhCC---------CEEEEeCCCCHHH
Confidence 468999999 999999999998875 5655442 211 000000 00 0000 0111 11111 122222
Q ss_pred CCcccCCCcEEEEecCCc---cCHHHHHHHHHCC-CCeEEecCC
Q 025368 76 IPWAETGAEYVVESTGVF---TDKDKAAAHLKGG-AKKVIISAP 115 (254)
Q Consensus 76 ~~~~~~~~Dvv~~a~~~~---~s~~~~~~~~~~G-~~~~viS~~ 115 (254)
+.-...++|+||.+++.. .....++.+.++| ++++|.|..
T Consensus 70 l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~ 113 (307)
T 2gas_A 70 LVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEF 113 (307)
T ss_dssp HHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEECSCC
T ss_pred HHHHHhCCCEEEECCcccccccHHHHHHHHHhcCCceEEeeccc
Confidence 222235799999998853 3455667777788 887765543
No 163
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.58 E-value=0.009 Score=51.15 Aligned_cols=30 Identities=33% Similarity=0.430 Sum_probs=25.4
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+|||.|.|+ |++|+.|++.|.++. .++..+
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~ 43 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAG-HDLVLI 43 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CEEEEE
Confidence 359999999 999999999999874 666554
No 164
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.54 E-value=0.0054 Score=52.69 Aligned_cols=81 Identities=14% Similarity=0.133 Sum_probs=46.5
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCc-eeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~-~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
|+||+|+|+|++|..+.+.|.++. + ++. ++.+..+. .+. .. .... | +... .++++. ..
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G-~~~V~-~~dr~~~~--~~~--~~-~~~~-------g--~~~~--~~~~e~---~~ 82 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG-AIDMA-AYDAASAE--SWR--PR-AEEL-------G--VSCK--ASVAEV---AG 82 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS-CCEEE-EECSSCHH--HHH--HH-HHHT-------T--CEEC--SCHHHH---HH
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CCeEE-EEcCCCCH--HHH--HH-HHHC-------C--CEEe--CCHHHH---Hh
Confidence 579999999999999999998874 4 433 33221000 000 00 0011 1 1121 223222 25
Q ss_pred CCcEEEEecCCccCHHHHHHHHH
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLK 104 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~ 104 (254)
++|+||.|+|.....+.+..+.+
T Consensus 83 ~aDvVi~~vp~~~~~~~~~~l~~ 105 (312)
T 3qsg_A 83 ECDVIFSLVTAQAALEVAQQAGP 105 (312)
T ss_dssp HCSEEEECSCTTTHHHHHHHHGG
T ss_pred cCCEEEEecCchhHHHHHHhhHh
Confidence 68999999999877666655543
No 165
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=95.52 E-value=0.095 Score=44.84 Aligned_cols=31 Identities=19% Similarity=0.309 Sum_probs=25.7
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.+++|.|.|+ |++|+.|++.|++.. .++..+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~ 57 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDG-HEVTVV 57 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCC-CEEEEE
Confidence 4579999999 999999999999874 676554
No 166
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.51 E-value=0.035 Score=48.53 Aligned_cols=30 Identities=30% Similarity=0.440 Sum_probs=25.5
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|++|.|.|+ |++|+.|++.|++.. .++..+
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~ 59 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG-HYVIAS 59 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC-CeEEEE
Confidence 579999999 999999999999874 666554
No 167
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.22 E-value=0.0073 Score=54.94 Aligned_cols=92 Identities=8% Similarity=0.071 Sum_probs=52.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
++||.|+|+|.+|+.+++.|.+++.+++. +..+..+. ...+ .... +.........+.+++.-...+
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~-v~~R~~~k-a~~l-----a~~~-------~~~~~~~D~~d~~~l~~~l~~ 88 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVT-VACRTLAN-AQAL-----AKPS-------GSKAISLDVTDDSALDKVLAD 88 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEE-EEESSHHH-HHHH-----HGGG-------TCEEEECCTTCHHHHHHHHHT
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEE-EEECCHHH-HHHH-----HHhc-------CCcEEEEecCCHHHHHHHHcC
Confidence 56999999999999999999998667643 33332110 0000 0000 100111110111111111247
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCCC
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGAK 108 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~~ 108 (254)
+|+||.|+|.+........++++|..
T Consensus 89 ~DvVIn~tp~~~~~~v~~a~l~~g~~ 114 (467)
T 2axq_A 89 NDVVISLIPYTFHPNVVKSAIRTKTD 114 (467)
T ss_dssp SSEEEECSCGGGHHHHHHHHHHHTCE
T ss_pred CCEEEECCchhhhHHHHHHHHhcCCE
Confidence 99999999987666667777888873
No 168
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.18 E-value=0.0088 Score=49.83 Aligned_cols=91 Identities=19% Similarity=0.239 Sum_probs=50.3
Q ss_pred EEEEEcc-CHHHHHHHHHHHcC-CCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEee--cCCCCCCCccc
Q 025368 5 KIGINGF-GRIGRLVARVILQR-DDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG--VRNPEEIPWAE 80 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~-p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~--~~~~~~~~~~~ 80 (254)
||.|.|+ |.+|+.+++.|.++ +..++..+. +. .+ +. ..+. ..+ +.++. ..|++.+.-..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~-r~-~~---~~--~~~~-~~~---------~~~~~~D~~d~~~~~~~~ 63 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIV-RN-PA---KA--QALA-AQG---------ITVRQADYGDEAALTSAL 63 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEE-SC-TT---TC--HHHH-HTT---------CEEEECCTTCHHHHHHHT
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEE-cC-hH---hh--hhhh-cCC---------CeEEEcCCCCHHHHHHHH
Confidence 5889999 99999999999886 456766553 21 11 00 0000 011 11111 11222221123
Q ss_pred CCCcEEEEecCCc------cCHHHHHHHHHCCCCeEEe
Q 025368 81 TGAEYVVESTGVF------TDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 81 ~~~Dvv~~a~~~~------~s~~~~~~~~~~G~~~~vi 112 (254)
.++|+||.+++.. .+...++.+.+.|++++|.
T Consensus 64 ~~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~ 101 (286)
T 2zcu_A 64 QGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAY 101 (286)
T ss_dssp TTCSEEEECC--------CHHHHHHHHHHHHTCCEEEE
T ss_pred hCCCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5799999988742 2445566777778876765
No 169
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=95.16 E-value=0.017 Score=48.46 Aligned_cols=80 Identities=15% Similarity=0.093 Sum_probs=45.2
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCC-ceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC-
Q 025368 4 VKIGINGFGRIGRLVARVILQRDD-VELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET- 81 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~-~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~- 81 (254)
+||+|+|+|.+|..+.+.|.+... .++.. +.+..+ +. .... ..| ...... .++++. ..
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~~~~----~~--~~~~-~~g-------~~~~~~--~~~~~~---~~~ 61 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-YDINPE----SI--SKAV-DLG-------IIDEGT--TSIAKV---EDF 61 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEE-ECSCHH----HH--HHHH-HTT-------SCSEEE--SCGGGG---GGT
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEE-EeCCHH----HH--HHHH-HCC-------Cccccc--CCHHHH---hcC
Confidence 599999999999999999987641 24432 222100 00 0000 111 100111 233222 35
Q ss_pred CCcEEEEecCCccCHHHHHHHH
Q 025368 82 GAEYVVESTGVFTDKDKAAAHL 103 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~ 103 (254)
++|+||.|+|.....+.+..+.
T Consensus 62 ~aDvVilavp~~~~~~v~~~l~ 83 (281)
T 2g5c_A 62 SPDFVMLSSPVRTFREIAKKLS 83 (281)
T ss_dssp CCSEEEECSCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCHHHHHHHHHHHH
Confidence 7999999999886666655443
No 170
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.16 E-value=0.016 Score=49.29 Aligned_cols=28 Identities=29% Similarity=0.464 Sum_probs=24.0
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
++||+|+|+|++|..+.+.|.+.. +++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~ 34 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG-LSTW 34 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CeEE
Confidence 479999999999999999999874 5654
No 171
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.12 E-value=0.0084 Score=50.03 Aligned_cols=93 Identities=19% Similarity=0.264 Sum_probs=51.7
Q ss_pred EEEEEcc-CHHHHHHHHHHHcC-CCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 5 KIGINGF-GRIGRLVARVILQR-DDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~-p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
+|.|.|+ |++|+.+++.|.++ +..++..+. +. .+ +. ..+. ..+ .........|++.+.-..++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~-r~-~~---~~--~~l~-~~~-------~~~~~~D~~d~~~l~~~~~~ 66 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIV-RN-VE---KA--STLA-DQG-------VEVRHGDYNQPESLQKAFAG 66 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEE-SC-TT---TT--HHHH-HTT-------CEEEECCTTCHHHHHHHTTT
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEE-cC-HH---HH--hHHh-hcC-------CeEEEeccCCHHHHHHHHhc
Confidence 7999999 99999999999886 456766553 21 11 00 0000 011 01111011222222111357
Q ss_pred CcEEEEecCCcc--------CHHHHHHHHHCCCCeEEe
Q 025368 83 AEYVVESTGVFT--------DKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 83 ~Dvv~~a~~~~~--------s~~~~~~~~~~G~~~~vi 112 (254)
+|+||.+++... +...++.+.+.|++++|.
T Consensus 67 ~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~ 104 (287)
T 2jl1_A 67 VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAY 104 (287)
T ss_dssp CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 999999987532 233456677788877765
No 172
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=95.03 E-value=0.044 Score=46.86 Aligned_cols=31 Identities=32% Similarity=0.535 Sum_probs=25.7
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+|++|.|.|+ |++|+.|++.|++.. .++..+
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~ 51 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERG-DKVVGI 51 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEE
Confidence 3579999999 999999999999875 666655
No 173
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=95.02 E-value=0.07 Score=45.00 Aligned_cols=28 Identities=29% Similarity=0.355 Sum_probs=23.1
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|.|.|+ |++|+.|++.|.++. .++.+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~ 30 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVI 30 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEE
Confidence 59999999 999999999999886 44444
No 174
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.00 E-value=0.043 Score=41.69 Aligned_cols=30 Identities=30% Similarity=0.407 Sum_probs=24.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
..+|.|+|+|.+|..+++.|.+.. .++..+
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g-~~V~vi 48 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG-HSVVVV 48 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEE
Confidence 369999999999999999998874 565544
No 175
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.95 E-value=0.018 Score=48.98 Aligned_cols=64 Identities=23% Similarity=0.233 Sum_probs=42.5
Q ss_pred cEEEEEc-cCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 4 VKIGING-FGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 4 ~~V~IvG-~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
+||+|+| +|++|..+.+.|.+.. .++... .+ + +. .+.++. ..+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~-~~--~--------------~~---------------~~~~~~---~~~ 65 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASG-YPISIL-DR--E--------------DW---------------AVAESI---LAN 65 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTT-CCEEEE-CT--T--------------CG---------------GGHHHH---HTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC-CeEEEE-EC--C--------------cc---------------cCHHHH---hcC
Confidence 5999999 7999999999998764 443321 11 0 00 011111 257
Q ss_pred CcEEEEecCCccCHHHHHHHH
Q 025368 83 AEYVVESTGVFTDKDKAAAHL 103 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~ 103 (254)
+|+||.|+|.....+.++.+.
T Consensus 66 aDvVilavp~~~~~~vl~~l~ 86 (298)
T 2pv7_A 66 ADVVIVSVPINLTLETIERLK 86 (298)
T ss_dssp CSEEEECSCGGGHHHHHHHHG
T ss_pred CCEEEEeCCHHHHHHHHHHHH
Confidence 899999999988777776553
No 176
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=94.93 E-value=0.021 Score=50.54 Aligned_cols=35 Identities=23% Similarity=0.307 Sum_probs=30.0
Q ss_pred CC-CcEEEEEcc-CHHHHHHHHHHHcCCC-ceeEEeee
Q 025368 1 MG-KVKIGINGF-GRIGRLVARVILQRDD-VELVATYM 35 (254)
Q Consensus 1 M~-~~~V~IvG~-G~~G~~l~~~L~~~p~-~~v~~~~~ 35 (254)
|+ |+||+|+|+ |.+|...++.+.+||+ |+++++..
T Consensus 1 m~~m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~a 38 (388)
T 1r0k_A 1 MSQPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTA 38 (388)
T ss_dssp -CCCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEE
T ss_pred CCCceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEc
Confidence 54 489999999 9999999999999997 99887743
No 177
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=94.89 E-value=0.0086 Score=51.12 Aligned_cols=25 Identities=40% Similarity=0.543 Sum_probs=22.0
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCc
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDV 28 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~ 28 (254)
|||+|+|+|.+|+.+.-+|..++.+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~ 25 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV 25 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC
Confidence 4999999999999999988877655
No 178
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.87 E-value=0.045 Score=46.86 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=24.5
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|.|+ |++|+.|++.|+++. .+|..+
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~ 49 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG-RTVRGF 49 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC-CEEEEE
Confidence 479999999 999999999999885 666554
No 179
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.85 E-value=0.04 Score=47.22 Aligned_cols=85 Identities=15% Similarity=0.153 Sum_probs=47.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEE--CC-EE---EEEeecCCCCCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLF--GE-KP---VTVFGVRNPEEI 76 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~--~~-~~---~~~~~~~~~~~~ 76 (254)
++||+|+|+|.+|..+...|.+.. .++..+ .+. . ... +. ..|-.+.- .+ .. +.+. .+++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~-~r~--~-~~~-----i~-~~Gl~~~~~~~g~~~~~~~~~~--~~~~~~ 68 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTG-HCVSVV-SRS--D-YET-----VK-AKGIRIRSATLGDYTFRPAAVV--RSAAEL 68 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTT-CEEEEE-CST--T-HHH-----HH-HHCEEEEETTTCCEEECCSCEE--SCGGGC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC-CeEEEE-eCC--h-HHH-----HH-hCCcEEeecCCCcEEEeeeeeE--CCHHHc
Confidence 379999999999999999998764 455433 221 1 100 00 01100100 01 11 1121 234333
Q ss_pred CcccCCCcEEEEecCCccCHHHHHHHH
Q 025368 77 PWAETGAEYVVESTGVFTDKDKAAAHL 103 (254)
Q Consensus 77 ~~~~~~~Dvv~~a~~~~~s~~~~~~~~ 103 (254)
..++|+||.|++.....+.++.+.
T Consensus 69 ---~~~~DlVilavK~~~~~~~l~~l~ 92 (320)
T 3i83_A 69 ---ETKPDCTLLCIKVVEGADRVGLLR 92 (320)
T ss_dssp ---SSCCSEEEECCCCCTTCCHHHHHT
T ss_pred ---CCCCCEEEEecCCCChHHHHHHHH
Confidence 237899999999988777666554
No 180
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=94.84 E-value=0.022 Score=51.47 Aligned_cols=93 Identities=9% Similarity=0.075 Sum_probs=49.0
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 80 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
|++++|.|+|+|.+|+.+++.|.+.. .++. +..+..+. .... . . .+ ++.........+.+++.-..
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~G-~~V~-v~~R~~~~-a~~l-----a--~--~~--~~~~~~~~Dv~d~~~l~~~l 66 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDSG-IKVT-VACRTLES-AKKL-----S--A--GV--QHSTPISLDVNDDAALDAEV 66 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTTT-CEEE-EEESSHHH-HHHT-----T--T--TC--TTEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCc-CEEE-EEECCHHH-HHHH-----H--H--hc--CCceEEEeecCCHHHHHHHH
Confidence 77789999999999999999999764 6643 33332110 0000 0 0 00 11101010111111111112
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCC
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
.++|+|+.|+|..........++++|.
T Consensus 67 ~~~DvVIn~a~~~~~~~i~~a~l~~g~ 93 (450)
T 1ff9_A 67 AKHDLVISLIPYTFHATVIKSAIRQKK 93 (450)
T ss_dssp TTSSEEEECCC--CHHHHHHHHHHHTC
T ss_pred cCCcEEEECCccccchHHHHHHHhCCC
Confidence 579999999998765555666677775
No 181
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.84 E-value=0.007 Score=52.34 Aligned_cols=29 Identities=38% Similarity=0.542 Sum_probs=23.9
Q ss_pred CC-CcEEEEEccCHHHHHHHHHHHcCCCce
Q 025368 1 MG-KVKIGINGFGRIGRLVARVILQRDDVE 29 (254)
Q Consensus 1 M~-~~~V~IvG~G~~G~~l~~~L~~~p~~~ 29 (254)
|+ ++||+|+|+|++|..+...|.....++
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~ 30 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGD 30 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCe
Confidence 53 569999999999999999998876446
No 182
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=94.82 E-value=0.013 Score=48.55 Aligned_cols=23 Identities=17% Similarity=0.265 Sum_probs=20.4
Q ss_pred cEEEEEccCHHHHHHHHHHHcCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
|||+|+|+|.+|..+.+.|.+..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g 23 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQG 23 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC
T ss_pred CEEEEECchHHHHHHHHHHHHCC
Confidence 38999999999999999988763
No 183
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.69 E-value=0.18 Score=46.11 Aligned_cols=30 Identities=20% Similarity=0.406 Sum_probs=25.8
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+|||.|.|+ |++|+.|++.|++.. .+|..+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l 177 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG-HEVIQL 177 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEE
Confidence 579999999 999999999999885 576554
No 184
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.68 E-value=0.051 Score=46.78 Aligned_cols=25 Identities=28% Similarity=0.388 Sum_probs=22.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDD 27 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~ 27 (254)
++||+|+|+|++|..++-.|...+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~ 31 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQT 31 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC
Confidence 4799999999999999999988753
No 185
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=94.68 E-value=0.027 Score=48.75 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=24.9
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcC-CCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
.++|.|.|+ |.+|+.+++.|+++ ...++..+
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~ 53 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVY 53 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEE
Confidence 479999999 99999999999887 42365543
No 186
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.62 E-value=0.041 Score=47.22 Aligned_cols=88 Identities=15% Similarity=0.123 Sum_probs=47.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccc-cceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKH-HELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~-~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
++||+|+|+|.+|..+...|.+.. .++..+ .+. .......+ +.....++..+.. .+... .+++.+ .
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~-~~~--~~~~~i~~~g~~~~~~~~~~~~---~~~~~--~~~~~~----~ 85 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG-HEVILI-ARP--QHVQAIEATGLRLETQSFDEQV---KVSAS--SDPSAV----Q 85 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT-CEEEEE-CCH--HHHHHHHHHCEEEECSSCEEEE---CCEEE--SCGGGG----T
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC-CeEEEE-EcH--hHHHHHHhCCeEEEcCCCcEEE---eeeee--CCHHHc----C
Confidence 479999999999999999998764 565444 221 11000000 0000011101111 11221 233332 5
Q ss_pred CCcEEEEecCCccCHHHHHHHH
Q 025368 82 GAEYVVESTGVFTDKDKAAAHL 103 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~ 103 (254)
++|+||.|++.....+.++.+.
T Consensus 86 ~~D~vilavk~~~~~~~l~~l~ 107 (318)
T 3hwr_A 86 GADLVLFCVKSTDTQSAALAMK 107 (318)
T ss_dssp TCSEEEECCCGGGHHHHHHHHT
T ss_pred CCCEEEEEcccccHHHHHHHHH
Confidence 7999999999986666665543
No 187
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=94.62 E-value=0.059 Score=46.12 Aligned_cols=84 Identities=21% Similarity=0.189 Sum_probs=57.6
Q ss_pred cEEEEE-cc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccC
Q 025368 4 VKIGIN-GF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET 81 (254)
Q Consensus 4 ~~V~Iv-G~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
.+++|+ |+ |..|..+++.|.++. +++++.. ++. ..|+. +.| ++++. +.+++ .+
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G-~~~v~~V----nP~-----------~~g~~--i~G--~~vy~--sl~el---~~ 68 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYG-TNLVGGT----TPG-----------KGGKT--HLG--LPVFN--TVKEA---KE 68 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEE----CTT-----------CTTCE--ETT--EEEES--SHHHH---HH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCC-CcEEEEe----CCC-----------cCcce--ECC--eeeec--hHHHh---hh
Confidence 568888 99 999999999998874 6644321 110 00111 223 45542 23333 13
Q ss_pred --CCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 82 --GAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 82 --~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
.+|+++.++|.....+.+.++.++|++.+|+
T Consensus 69 ~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 69 QTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 6999999999999999999999999987554
No 188
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.57 E-value=0.075 Score=42.62 Aligned_cols=27 Identities=22% Similarity=0.326 Sum_probs=22.2
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
++||+|+|+|.+|..+.+.|.+.. .++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g-~~V 45 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG-HEV 45 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEE
Confidence 469999999999999999998763 443
No 189
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.56 E-value=0.037 Score=48.07 Aligned_cols=30 Identities=30% Similarity=0.337 Sum_probs=25.2
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|.|+ |.+|+.|++.|.++. .++..+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~ 35 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQ 35 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEE
Confidence 478999999 999999999998864 666554
No 190
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=94.50 E-value=0.039 Score=48.32 Aligned_cols=95 Identities=19% Similarity=0.179 Sum_probs=56.1
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCC------
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNP------ 73 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~------ 73 (254)
|.++||+|+|+ |.+|..-++.+.+|+.|+++++...+. ..... ..+. .|+-+.+.+..+.+.
T Consensus 1 M~~k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n---~~~l~-~q~~-------~f~p~~v~v~~~~~~~~~l~~ 69 (376)
T 3a06_A 1 MEERTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSN---LELAF-KIVK-------EFNVKNVAITGDVEFEDSSIN 69 (376)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSC---HHHHH-HHHH-------HHTCCEEEECSSCCCCCSSSE
T ss_pred CCcceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCC---HHHHH-HHHH-------HcCCCEEEEccHHHHHHHHHH
Confidence 66689999998 999999999999997799998854221 01100 0000 011111111100111
Q ss_pred --------CCCCcccCCCcEEEEecCCccCHHHHHHHHHCCC
Q 025368 74 --------EEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 74 --------~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
.++. ...++|+|+.|++.....+..-.++++|.
T Consensus 70 ~~~G~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aGK 110 (376)
T 3a06_A 70 VWKGSHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHSK 110 (376)
T ss_dssp EEESTTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHCS
T ss_pred HccCHHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCCC
Confidence 1110 01468999999998877777777888886
No 191
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=94.38 E-value=0.06 Score=45.80 Aligned_cols=29 Identities=38% Similarity=0.665 Sum_probs=24.7
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
|+ .|||++|.|++|..+.+.|.++. +++.
T Consensus 4 Ms-~kIgfIGLG~MG~~mA~~L~~~G-~~V~ 32 (297)
T 4gbj_A 4 MS-EKIAFLGLGNLGTPIAEILLEAG-YELV 32 (297)
T ss_dssp CC-CEEEEECCSTTHHHHHHHHHHTT-CEEE
T ss_pred CC-CcEEEEecHHHHHHHHHHHHHCC-CeEE
Confidence 43 59999999999999999999884 7754
No 192
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.38 E-value=0.022 Score=48.72 Aligned_cols=84 Identities=15% Similarity=0.214 Sum_probs=46.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEEC-C-EE---EEEeecCCCCCCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFG-E-KP---VTVFGVRNPEEIP 77 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~-~-~~---~~~~~~~~~~~~~ 77 (254)
++||+|+|+|.+|..+...|.+.. .++..+ .+. . .. .+. ..|..+... + .. +.+. .+++.+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~-~r~--~-~~-----~i~-~~g~~~~~~~g~~~~~~~~~~--~~~~~~- 67 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSG-EDVHFL-LRR--D-YE-----AIA-GNGLKVFSINGDFTLPHVKGY--RAPEEI- 67 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTS-CCEEEE-CST--T-HH-----HHH-HTCEEEEETTCCEEESCCCEE--SCHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CeEEEE-EcC--c-HH-----HHH-hCCCEEEcCCCeEEEeeceee--cCHHHc-
Confidence 379999999999999999998764 454332 221 1 10 111 112111110 1 11 1111 222222
Q ss_pred cccCCCcEEEEecCCccCHHHHHHHH
Q 025368 78 WAETGAEYVVESTGVFTDKDKAAAHL 103 (254)
Q Consensus 78 ~~~~~~Dvv~~a~~~~~s~~~~~~~~ 103 (254)
..+|+||.|+++....+.++.+.
T Consensus 68 ---~~~D~vilavk~~~~~~~l~~l~ 90 (312)
T 3hn2_A 68 ---GPMDLVLVGLKTFANSRYEELIR 90 (312)
T ss_dssp ---CCCSEEEECCCGGGGGGHHHHHG
T ss_pred ---CCCCEEEEecCCCCcHHHHHHHH
Confidence 47899999999988777776654
No 193
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.33 E-value=0.027 Score=48.10 Aligned_cols=29 Identities=31% Similarity=0.431 Sum_probs=23.5
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCc-eeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDV-ELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~-~v~ 31 (254)
++||+|+|+|.+|..+...|.....+ ++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~ 36 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIV 36 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEE
Confidence 36999999999999999998877533 543
No 194
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=94.29 E-value=0.16 Score=43.22 Aligned_cols=29 Identities=28% Similarity=0.408 Sum_probs=23.9
Q ss_pred EEEEEcc-CHHHHHHHHHHHcC--CC---ceeEEe
Q 025368 5 KIGINGF-GRIGRLVARVILQR--DD---VELVAT 33 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~--p~---~~v~~~ 33 (254)
||.|.|+ |++|+.|++.|+++ +. .++..+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~ 36 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVL 36 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEE
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEE
Confidence 8999999 99999999999874 24 566654
No 195
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.19 E-value=0.11 Score=43.31 Aligned_cols=81 Identities=11% Similarity=0.195 Sum_probs=45.2
Q ss_pred EEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCE--EEEEeecCCCCCCCcccCC
Q 025368 5 KIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEK--PVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 5 ~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~--~~~~~~~~~~~~~~~~~~~ 82 (254)
||+|+|+|.+|..+...|.+.. .++..+ .+. . .+. ..+.... ..+. ...+.. .+.+. ..+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~-~r~--~--~~~--~~l~~~~-----~~~~~~~~~~~~-~~~~~----~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQG-HEVQGW-LRV--P--QPY--CSVNLVE-----TDGSIFNESLTA-NDPDF----LAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEE-CSS--C--CSE--EEEEEEC-----TTSCEEEEEEEE-SCHHH----HHT
T ss_pred eEEEECcCHHHHHHHHHHHhCC-CCEEEE-EcC--c--cce--eeEEEEc-----CCCceeeeeeee-cCccc----cCC
Confidence 8999999999999999998774 454432 221 1 000 0011000 0011 111111 22222 257
Q ss_pred CcEEEEecCCccCHHHHHHHH
Q 025368 83 AEYVVESTGVFTDKDKAAAHL 103 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~ 103 (254)
+|+||.|++.....+.++.+.
T Consensus 64 ~d~vi~~v~~~~~~~v~~~l~ 84 (291)
T 1ks9_A 64 SDLLLVTLKAWQVSDAVKSLA 84 (291)
T ss_dssp CSEEEECSCGGGHHHHHHHHH
T ss_pred CCEEEEEecHHhHHHHHHHHH
Confidence 999999999987666665544
No 196
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.04 E-value=0.0077 Score=45.34 Aligned_cols=31 Identities=19% Similarity=0.065 Sum_probs=25.2
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEeeee
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATYMF 36 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~ 36 (254)
.||+|+|+|.+|+.+++.|... .++ +.++.+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~-g~~-v~v~~r 52 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP-QYK-VTVAGR 52 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT-TCE-EEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCE-EEEEcC
Confidence 5999999999999999988875 477 555544
No 197
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=93.98 E-value=0.2 Score=41.97 Aligned_cols=29 Identities=24% Similarity=0.390 Sum_probs=24.8
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|||.|.|+ |++|+.|++.|.++. .++..+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~ 30 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG-YEVVVV 30 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEE
Confidence 38999999 999999999999885 576554
No 198
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.95 E-value=0.043 Score=46.47 Aligned_cols=23 Identities=26% Similarity=0.426 Sum_probs=20.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC
Q 025368 3 KVKIGINGFGRIGRLVARVILQR 25 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~ 25 (254)
++||+|+|+|.+|..+...|.+.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~ 24 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQS 24 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHC
Confidence 36999999999999999988765
No 199
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.92 E-value=0.057 Score=46.07 Aligned_cols=24 Identities=29% Similarity=0.544 Sum_probs=21.2
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRDD 27 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~ 27 (254)
+||+|+|+|.+|..++..|.....
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~ 24 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGS 24 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC
Confidence 399999999999999999987753
No 200
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.78 E-value=0.06 Score=45.45 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=23.7
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
|+|+||+|+|+|.+|..+...|.+.. .++..
T Consensus 1 ~~~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~ 31 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMGSRLGIMLHQGG-NDVTL 31 (316)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhCC-CcEEE
Confidence 45679999999999999999998774 45543
No 201
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.64 E-value=0.073 Score=40.19 Aligned_cols=33 Identities=12% Similarity=0.007 Sum_probs=27.5
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEee
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATY 34 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~ 34 (254)
|...+|.|+|+|++|+.+++.|.+.. .+++.+.
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g-~~V~vid 33 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRG-QNVTVIS 33 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CCEEEEE
Confidence 77789999999999999999998774 6666553
No 202
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=93.63 E-value=0.057 Score=45.18 Aligned_cols=27 Identities=19% Similarity=0.443 Sum_probs=24.4
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCC
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDD 27 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~ 27 (254)
|+|+||.|.|+ |++|+.|++.|.++..
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~ 31 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG 31 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence 67789999999 9999999999998764
No 203
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=93.53 E-value=0.017 Score=50.24 Aligned_cols=75 Identities=15% Similarity=0.069 Sum_probs=44.2
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
.+||+|+|+|.+|..+.+.|.+.. +++. ++.+. . .+.. .. .... | +.+. +.++. ..+
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G-~~V~-~~~~~--~--~~~~-~~-a~~~-------G--~~~~---~~~e~---~~~ 72 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSG-VDVT-VGLRS--G--SATV-AK-AEAH-------G--LKVA---DVKTA---VAA 72 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTT-CCEE-EECCT--T--CHHH-HH-HHHT-------T--CEEE---CHHHH---HHT
T ss_pred CCEEEEECchHHHHHHHHHHHHCc-CEEE-EEECC--h--HHHH-HH-HHHC-------C--CEEc---cHHHH---Hhc
Confidence 368999999999999999998774 5543 22221 0 0000 00 0011 2 1121 22222 257
Q ss_pred CcEEEEecCCccCHHHHH
Q 025368 83 AEYVVESTGVFTDKDKAA 100 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~ 100 (254)
+|+||.|+|.....+.+.
T Consensus 73 aDvVilavp~~~~~~v~~ 90 (338)
T 1np3_A 73 ADVVMILTPDEFQGRLYK 90 (338)
T ss_dssp CSEEEECSCHHHHHHHHH
T ss_pred CCEEEEeCCcHHHHHHHH
Confidence 999999999877666665
No 204
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.52 E-value=0.069 Score=39.61 Aligned_cols=30 Identities=13% Similarity=0.121 Sum_probs=25.2
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|.+|.|+|+|++|+.+++.|.++. .++..+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g-~~V~~i 35 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG-KKVLAV 35 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CeEEEE
Confidence 468999999999999999999874 566554
No 205
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=93.39 E-value=0.29 Score=44.26 Aligned_cols=83 Identities=16% Similarity=0.210 Sum_probs=58.2
Q ss_pred CcEEEEEcc-C---HHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCc
Q 025368 3 KVKIGINGF-G---RIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPW 78 (254)
Q Consensus 3 ~~~V~IvG~-G---~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 78 (254)
..+|+|+|+ + ..|..+++.|.++....+..+.-. +..+ .| ++++ .+.++++
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~------------------~~~i--~G--~~~y--~sl~~lp- 62 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIK------------------EEEV--QG--VKAY--KSVKDIP- 62 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSS------------------CSEE--TT--EECB--SSTTSCS-
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCC------------------CCeE--CC--Eecc--CCHHHcC-
Confidence 468999999 4 679999999987752333333210 0011 23 4454 3455553
Q ss_pred ccCCCcEEEEecCCccCHHHHHHHHHCCCCeEEe
Q 025368 79 AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 79 ~~~~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~vi 112 (254)
+.+|+++.++|+....+.++++.++|+|.+|+
T Consensus 63 --~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 63 --DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp --SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred --CCCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 47999999999999999999999999987665
No 206
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=93.38 E-value=0.63 Score=41.06 Aligned_cols=30 Identities=10% Similarity=0.102 Sum_probs=24.5
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|.|+ |++|+.|++.|.+.. .++..+
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~ 99 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYS-HRIYCF 99 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTE-EEEEEE
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCC-CEEEEE
Confidence 569999999 999999999996653 566554
No 207
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.33 E-value=0.015 Score=50.03 Aligned_cols=25 Identities=28% Similarity=0.522 Sum_probs=21.9
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCc
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDV 28 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~ 28 (254)
|||+|+|+|.+|..++..|..++-+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~ 25 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVA 25 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC
Confidence 3999999999999999999887643
No 208
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=93.29 E-value=0.056 Score=46.69 Aligned_cols=28 Identities=21% Similarity=0.330 Sum_probs=24.1
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.|... .+++.+
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~-G~~V~~ 165 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL-GMHVIG 165 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCEEEE
Confidence 6899999999999999999876 477654
No 209
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=93.18 E-value=0.12 Score=41.76 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=27.7
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCC-CceeEEe
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRD-DVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p-~~~v~~~ 33 (254)
|++++|.|.|+ |.+|+.+++.|.+++ ..++..+
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~ 36 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGL 36 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEE
Confidence 55689999999 999999999999885 5676654
No 210
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.15 E-value=0.088 Score=45.41 Aligned_cols=30 Identities=13% Similarity=0.257 Sum_probs=23.8
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
|+++||+|+|+|.+|..+...|.++. .++.
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g-~~V~ 31 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKG-QSVL 31 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEE
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCC-CEEE
Confidence 34579999999999999999998764 5654
No 211
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=93.08 E-value=0.056 Score=46.70 Aligned_cols=28 Identities=21% Similarity=0.275 Sum_probs=24.0
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.|... .+++.+
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~ 168 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHF-GMKVLG 168 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred ceEEEEEECHHHHHHHHHHHhC-CCEEEE
Confidence 6999999999999999999877 466554
No 212
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.90 E-value=0.09 Score=45.32 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=24.9
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
|+++||+|+|+|.+|..+...|.+.. .++..
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g-~~V~~ 31 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAG-EAINV 31 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTT-CCEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC-CEEEE
Confidence 77789999999999999999998764 45433
No 213
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=92.70 E-value=0.096 Score=44.50 Aligned_cols=33 Identities=33% Similarity=0.480 Sum_probs=26.0
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCC-CceeEEe
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRD-DVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p-~~~v~~~ 33 (254)
|+.|||.|.|+ |++|+.|++.|+++. +.++..+
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~ 35 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINI 35 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEE
Confidence 76689999999 999999999998764 4676654
No 214
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=92.55 E-value=0.13 Score=45.08 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=30.3
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCC-ceeEEeee
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDD-VELVATYM 35 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~-~~v~~~~~ 35 (254)
|.||.|+|+ |.+|.+-++.+.+||+ |+++++..
T Consensus 21 mk~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa 55 (398)
T 2y1e_A 21 RLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAA 55 (398)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred ceEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEe
Confidence 468999999 9999999999999987 99999876
No 215
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.54 E-value=0.14 Score=42.98 Aligned_cols=30 Identities=20% Similarity=0.284 Sum_probs=24.9
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+.||+|+|+|.+|..+.+.+.++. +++..
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G-~~V~l 32 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHG-FAVTA 32 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CeEEE
Confidence 3569999999999999999999884 66544
No 216
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=92.45 E-value=0.089 Score=44.52 Aligned_cols=28 Identities=25% Similarity=0.456 Sum_probs=23.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+|+|+|+|.+|+.+++.|.... +++..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~ 183 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG-AKVKV 183 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEE
Confidence 68999999999999999998774 56533
No 217
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=92.41 E-value=0.14 Score=42.95 Aligned_cols=29 Identities=21% Similarity=0.378 Sum_probs=24.9
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|||.|.|+ |++|+.|++.|.+.. .+|..+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l 30 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLV 30 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEE
Confidence 48999999 999999999999874 676665
No 218
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.41 E-value=0.16 Score=37.13 Aligned_cols=30 Identities=27% Similarity=0.482 Sum_probs=24.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.++|.|+|+|++|..+++.|.+.. .++..+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g-~~v~~~ 33 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG-HDIVLI 33 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CeEEEE
Confidence 369999999999999999998874 565543
No 219
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=92.34 E-value=0.14 Score=45.00 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=30.6
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCC-ceeEEeeee
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDD-VELVATYMF 36 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~-~~v~~~~~~ 36 (254)
|++|.|+|+ |.||.+-++.+.+||+ |+++++...
T Consensus 9 ~k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag 44 (406)
T 1q0q_A 9 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG 44 (406)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred ceeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcC
Confidence 579999999 9999999999999987 999997653
No 220
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.29 E-value=0.1 Score=47.55 Aligned_cols=33 Identities=15% Similarity=0.211 Sum_probs=26.4
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcC-CCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
|+|+||+|+|+||+|..+...|.++ +.+++..+
T Consensus 7 ~~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~ 40 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVV 40 (481)
T ss_dssp CCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEE
Confidence 3457999999999999999999876 35676554
No 221
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=92.26 E-value=0.12 Score=43.61 Aligned_cols=31 Identities=29% Similarity=0.410 Sum_probs=25.5
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEE
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~ 32 (254)
|+++||.|.|+ |++|+.|++.|.++. .++..
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~g-~~v~~ 32 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQRG-DVELV 32 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEE
Confidence 77789999999 999999999999874 55544
No 222
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.12 E-value=0.073 Score=46.02 Aligned_cols=26 Identities=19% Similarity=0.222 Sum_probs=23.0
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCc
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDV 28 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~ 28 (254)
.+||+|+|+|.+|..++..|...+-+
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~ 34 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIA 34 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC
Confidence 47999999999999999999887644
No 223
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.93 E-value=0.084 Score=44.81 Aligned_cols=28 Identities=21% Similarity=0.430 Sum_probs=23.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+|+|+|+|.+|+.+++.|.... +++..
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~ 185 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG-ANVKV 185 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCC-CEEEE
Confidence 68999999999999999998774 55443
No 224
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.87 E-value=0.12 Score=46.78 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=26.1
Q ss_pred CC-CcEEEEEccCHHHHHHHHHHHcCC-CceeEEe
Q 025368 1 MG-KVKIGINGFGRIGRLVARVILQRD-DVELVAT 33 (254)
Q Consensus 1 M~-~~~V~IvG~G~~G~~l~~~L~~~p-~~~v~~~ 33 (254)
|+ |+||+|+|+|++|..+...|.++. .+++..+
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~ 36 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVV 36 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEE
Confidence 54 479999999999999999998762 4665543
No 225
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=91.85 E-value=0.16 Score=39.95 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=25.6
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCc-eeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDV-ELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~-~v~~~ 33 (254)
+++|.|.|+ |++|+.+++.|.++..+ ++..+
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~ 37 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAP 37 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECC
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEE
Confidence 469999999 99999999999998653 65443
No 226
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.78 E-value=0.088 Score=45.57 Aligned_cols=26 Identities=27% Similarity=0.264 Sum_probs=22.5
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCc
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDV 28 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~ 28 (254)
.+||+|+|+|++|..++..|+..+-+
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~ 46 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLA 46 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC
Confidence 36999999999999999998887643
No 227
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=91.77 E-value=0.16 Score=42.59 Aligned_cols=30 Identities=33% Similarity=0.402 Sum_probs=26.0
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++||.|.|+ |++|+.|++.|+++. .++..+
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~ 37 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASG-EEVTVL 37 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CEEEEE
Confidence 689999999 999999999999885 566554
No 228
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=91.71 E-value=0.15 Score=45.68 Aligned_cols=34 Identities=24% Similarity=0.434 Sum_probs=29.1
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHc---CCC-ceeEEeee
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQ---RDD-VELVATYM 35 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~---~p~-~~v~~~~~ 35 (254)
.|.||.|+|+ |.+|.+-++.+.+ ||+ |+++++..
T Consensus 76 ~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaA 114 (488)
T 3au8_A 76 KPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYV 114 (488)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEE
T ss_pred cceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEc
Confidence 4679999999 9999999999998 555 99998765
No 229
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.69 E-value=0.098 Score=45.53 Aligned_cols=26 Identities=27% Similarity=0.308 Sum_probs=21.9
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
+||+|+|+|.+|..+...|.+.. .++
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~G-~~V 41 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKKC-REV 41 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTTE-EEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCC-CEE
Confidence 49999999999999999998653 454
No 230
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=91.51 E-value=0.57 Score=40.50 Aligned_cols=95 Identities=14% Similarity=0.198 Sum_probs=57.8
Q ss_pred CcEEEEEcc-CHHHHHHHHH--HHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCE--EEEEeecCCCCCCC
Q 025368 3 KVKIGINGF-GRIGRLVARV--ILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEK--PVTVFGVRNPEEIP 77 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~--L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~--~~~~~~~~~~~~~~ 77 (254)
..||-|.|+ |..++.++.. +.++++.++++......+ |. |+.+.++.. .++++. +.+++.
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~---g~----------~~~v~~G~~~~Gvpvy~--sv~ea~ 74 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTG---DH----------KQKFYWGHKEILIPVFK--NMADAM 74 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSC---SE----------EEEEEETTEEEEEEEES--SHHHHH
T ss_pred CCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCC---Cc----------cceEeccCccCCceeeC--CHHHHh
Confidence 369999999 9988888876 566778888876532110 10 012222222 256653 333321
Q ss_pred cccCCCcEEEEecCCccCHHHHHHHHH-CCCCeEEe
Q 025368 78 WAETGAEYVVESTGVFTDKDKAAAHLK-GGAKKVII 112 (254)
Q Consensus 78 ~~~~~~Dvv~~a~~~~~s~~~~~~~~~-~G~~~~vi 112 (254)
-...++|+++.++|+....+.+.+++. +|++.+|+
T Consensus 75 ~~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vVi 110 (334)
T 3mwd_B 75 RKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAI 110 (334)
T ss_dssp HHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEE
T ss_pred hcCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEE
Confidence 000158999999999776665555555 89987776
No 231
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.48 E-value=0.23 Score=42.77 Aligned_cols=26 Identities=35% Similarity=0.558 Sum_probs=23.6
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCC
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
|.++||+|+|+|.+|..++..|..++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~ 28 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQ 28 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC
Confidence 66789999999999999999988875
No 232
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.45 E-value=0.11 Score=44.54 Aligned_cols=26 Identities=15% Similarity=0.312 Sum_probs=21.6
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCC
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
|++|||+|+|+|.+|..+.+.|.+..
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G 45 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAG 45 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC
Confidence 34579999999999999999998764
No 233
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.43 E-value=0.17 Score=37.12 Aligned_cols=30 Identities=20% Similarity=0.437 Sum_probs=24.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+.+|.|+|+|.+|+.+++.|.+.. .++..+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g-~~v~~~ 35 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG-HEVLAV 35 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 458999999999999999998774 555443
No 234
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.35 E-value=0.21 Score=42.45 Aligned_cols=29 Identities=17% Similarity=0.480 Sum_probs=24.6
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
.|+||+|+|+|++|..+.+.|.+.. +++.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G-~~V~ 48 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNG-FKVT 48 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTT-CEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHCC-CeEE
Confidence 3579999999999999999999874 5654
No 235
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.35 E-value=0.2 Score=43.79 Aligned_cols=28 Identities=32% Similarity=0.560 Sum_probs=24.4
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
++||+|+|.|++|..+.+.|.++. +++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G-~~V~ 49 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG-HECV 49 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEE
T ss_pred CCEEEEECchHHHHHHHHHHHhCC-CEEE
Confidence 579999999999999999999885 6654
No 236
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.07 E-value=0.21 Score=45.03 Aligned_cols=30 Identities=20% Similarity=0.401 Sum_probs=24.7
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
|+ |||+|+|+||+|..+...|.+.. +++..
T Consensus 1 M~-mkI~VIG~G~vG~~lA~~La~~G-~~V~~ 30 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVGLVSATCFAELG-ANVRC 30 (450)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CC-CEEEEECcCHHHHHHHHHHHhcC-CEEEE
Confidence 54 69999999999999999999874 66654
No 237
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.92 E-value=0.26 Score=39.04 Aligned_cols=28 Identities=32% Similarity=0.470 Sum_probs=24.4
Q ss_pred EEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 5 KIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
||.|.|+ |.+|+.+++.|+++. .++..+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g-~~V~~~ 30 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRG-HEVLAV 30 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCC-CEEEEE
Confidence 8999999 999999999999885 676554
No 238
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.90 E-value=0.22 Score=42.73 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=22.4
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCC
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
|+++||+|+|+|++|..++..|..++
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~ 29 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQS 29 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC
Confidence 34579999999999999999888775
No 239
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.84 E-value=0.23 Score=42.78 Aligned_cols=26 Identities=31% Similarity=0.452 Sum_probs=22.7
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCC
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
|.++||+|+|+|.+|..+...|..++
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~ 30 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKE 30 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTT
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCC
Confidence 66789999999999999999988775
No 240
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=90.83 E-value=0.14 Score=44.10 Aligned_cols=25 Identities=28% Similarity=0.437 Sum_probs=21.5
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcC
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQR 25 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~ 25 (254)
|+++||+|+|+|.+|..+...|.+.
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhc
Confidence 5567999999999999999988765
No 241
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.82 E-value=0.59 Score=40.00 Aligned_cols=87 Identities=16% Similarity=0.035 Sum_probs=49.6
Q ss_pred CcEEEEEccCHHHHH-HHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCccc-
Q 025368 3 KVKIGINGFGRIGRL-VARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE- 80 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~-l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~- 80 (254)
|+||.++|.|-+|.. +.++|.++. .++...-... . .... . .|.-.| +.++...+++.+ .
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G-~~V~~~D~~~--~--~~~~-~--------~L~~~g--i~v~~g~~~~~l---~~ 64 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAG-FEVSGCDAKM--Y--PPMS-T--------QLEALG--IDVYEGFDAAQL---DE 64 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTT-CEEEEEESSC--C--TTHH-H--------HHHHTT--CEEEESCCGGGG---GS
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCC-CEEEEEcCCC--C--cHHH-H--------HHHhCC--CEEECCCCHHHc---CC
Confidence 469999999999996 888888874 6654421110 0 0000 0 011012 233222334443 2
Q ss_pred CCCcEEEEecCCccCHHHHHHHHHCCCC
Q 025368 81 TGAEYVVESTGVFTDKDKAAAHLKGGAK 108 (254)
Q Consensus 81 ~~~Dvv~~a~~~~~s~~~~~~~~~~G~~ 108 (254)
.++|+|+-+.+-......+.++.++|++
T Consensus 65 ~~~d~vV~Spgi~~~~p~~~~a~~~gi~ 92 (326)
T 3eag_A 65 FKADVYVIGNVAKRGMDVVEAILNLGLP 92 (326)
T ss_dssp CCCSEEEECTTCCTTCHHHHHHHHTTCC
T ss_pred CCCCEEEECCCcCCCCHHHHHHHHcCCc
Confidence 3689999866555555566778899983
No 242
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.77 E-value=0.25 Score=44.31 Aligned_cols=29 Identities=38% Similarity=0.433 Sum_probs=24.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++||+|+|+||+|..+...|.+ .+++...
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G~~V~~~ 64 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--NHEVVAL 64 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TSEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHc--CCeEEEE
Confidence 5799999999999999998886 4776553
No 243
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.76 E-value=0.21 Score=40.05 Aligned_cols=28 Identities=29% Similarity=0.452 Sum_probs=23.2
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
++||+|+|+|.+|+.+++.|.++. .++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g-~~V~ 55 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG-FKVV 55 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT-CCEE
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC-CEEE
Confidence 469999999999999999998774 4543
No 244
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.76 E-value=0.26 Score=42.13 Aligned_cols=84 Identities=17% Similarity=0.081 Sum_probs=47.2
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecC-CCCCCCcccC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR-NPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~-~~~~~~~~~~ 81 (254)
++||+|+|+|++|..+.+.|.++..+++.. +.+..+. ..+.. . ... .+.-.|. . . ++++. ..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~-~dr~~~~-~~~~~--~-~~~---~~~~~g~---~---~~s~~e~---~~ 86 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAA-YDLRFND-PAASG--A-LRA---RAAELGV---E---PLDDVAG---IA 86 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEE-ECGGGGC-TTTHH--H-HHH---HHHHTTC---E---EESSGGG---GG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEE-EeCCCcc-ccchH--H-HHH---HHHHCCC---C---CCCHHHH---Hh
Confidence 479999999999999999999874145443 2221100 00000 0 000 0000121 1 2 33333 36
Q ss_pred CCcEEEEecCCccCHHHHHHHH
Q 025368 82 GAEYVVESTGVFTDKDKAAAHL 103 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~ 103 (254)
++|+||.|+|.....+.+..+.
T Consensus 87 ~aDvVi~avp~~~~~~~~~~i~ 108 (317)
T 4ezb_A 87 CADVVLSLVVGAATKAVAASAA 108 (317)
T ss_dssp GCSEEEECCCGGGHHHHHHHHG
T ss_pred cCCEEEEecCCHHHHHHHHHHH
Confidence 7999999999987766665544
No 245
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.66 E-value=0.16 Score=41.64 Aligned_cols=24 Identities=21% Similarity=0.493 Sum_probs=21.7
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
++||+|+|+|.+|..+.+.|.+..
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g 25 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKN 25 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT
T ss_pred CCeEEEECccHHHHHHHHHHHhCC
Confidence 479999999999999999998874
No 246
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=90.54 E-value=0.26 Score=42.42 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=26.3
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcC-CCceeEEee
Q 025368 3 KVKIGINGF-GRIGRLVARVILQR-DDVELVATY 34 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~-p~~~v~~~~ 34 (254)
+++|.|.|+ |++|+.|++.|+++ ...+|..+.
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~ 43 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLD 43 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEE
Confidence 479999999 99999999999983 257776653
No 247
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.44 E-value=0.22 Score=41.76 Aligned_cols=26 Identities=27% Similarity=0.630 Sum_probs=23.0
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
+||+|+|+|.+|..+.+.|.++. +++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g-~~V 31 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAG-YSL 31 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEE
T ss_pred ceEEEECchHHHHHHHHHHHhCC-CEE
Confidence 69999999999999999998874 565
No 248
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.39 E-value=0.28 Score=40.18 Aligned_cols=29 Identities=28% Similarity=0.439 Sum_probs=24.1
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
..+||+|+|+|.+|..+.+.|.++. .++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G-~~V~ 46 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLG-HEVT 46 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CEEE
Confidence 3579999999999999999999874 5653
No 249
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=90.28 E-value=0.26 Score=42.20 Aligned_cols=31 Identities=26% Similarity=0.289 Sum_probs=26.2
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+|++|.|.|+ |++|+.|++.|++.. .++..+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~ 57 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLD-QKVVGL 57 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEE
Confidence 4579999999 999999999999874 566554
No 250
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.28 E-value=0.26 Score=39.05 Aligned_cols=29 Identities=24% Similarity=0.253 Sum_probs=24.5
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
+..|+|||+|.+|..+...|.++. +++.-
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G-~~V~v 30 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAG-HQVHL 30 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC-CCEEE
Confidence 478999999999999999999884 66544
No 251
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=90.27 E-value=0.33 Score=41.00 Aligned_cols=29 Identities=21% Similarity=0.225 Sum_probs=24.2
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
|+||+|+|+|.+|..+...|.++. +++..
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G-~~V~~ 43 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATG-HTVVL 43 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CeEEE
Confidence 468999999999999999998874 66543
No 252
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.23 E-value=0.31 Score=36.11 Aligned_cols=30 Identities=30% Similarity=0.547 Sum_probs=25.1
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEee
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATY 34 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~ 34 (254)
.+|.|+|+|.+|+.+++.|.++. .++..+.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g-~~v~vid 37 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASD-IPLVVIE 37 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCC-CCEEEEE
Confidence 58999999999999999998874 6666553
No 253
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.20 E-value=0.22 Score=45.39 Aligned_cols=30 Identities=10% Similarity=0.194 Sum_probs=25.2
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
|.|+||||+|.|.+|..+.+.|.++. +++.
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G-~~V~ 31 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHG-FVVC 31 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTT-CCEE
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCC-CEEE
Confidence 56789999999999999999999885 5654
No 254
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=89.95 E-value=0.26 Score=44.67 Aligned_cols=29 Identities=21% Similarity=0.425 Sum_probs=25.1
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
|+++||+|+|+|.+|..+.+.|.++. +++
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G-~~V 31 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRG-YTV 31 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTT-CCE
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCC-CEE
Confidence 65679999999999999999999874 564
No 255
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.89 E-value=0.27 Score=43.30 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=23.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
||||+|+|+|++|..+...|......++..
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~ 31 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRV 31 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 369999999999999999987643456543
No 256
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.88 E-value=0.21 Score=41.00 Aligned_cols=27 Identities=33% Similarity=0.539 Sum_probs=23.0
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
|+||+|+|+|.+|..+++.|.+.. .++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g-~~v 29 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTP-HEL 29 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSS-CEE
T ss_pred ccEEEEECCCHHHHHHHHHHHhCC-CeE
Confidence 469999999999999999998775 443
No 257
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=89.59 E-value=0.3 Score=41.15 Aligned_cols=28 Identities=25% Similarity=0.363 Sum_probs=24.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
|+||+|+|+|++|..+.+.|.++. +++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G-~~V~ 30 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAG-YLLN 30 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT-CEEE
T ss_pred CCEEEEEeecHHHHHHHHHHHhCC-CeEE
Confidence 579999999999999999999874 5653
No 258
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=89.55 E-value=0.22 Score=41.27 Aligned_cols=29 Identities=14% Similarity=0.358 Sum_probs=24.5
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|||.|.|+ |++|+.+++.|.++. .++..+
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g-~~V~~~ 35 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEE-YDIYPF 35 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTT-EEEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCC-CEEEEe
Confidence 59999999 999999999999874 565554
No 259
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.54 E-value=0.24 Score=41.86 Aligned_cols=28 Identities=21% Similarity=0.408 Sum_probs=23.9
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
++||+|+|+|++|..+.+.|.++. +++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G-~~V~ 42 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP-GGVT 42 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST-TCEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC-CeEE
Confidence 469999999999999999998874 5654
No 260
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.49 E-value=0.35 Score=41.65 Aligned_cols=27 Identities=37% Similarity=0.498 Sum_probs=23.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCce
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVE 29 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~ 29 (254)
++||+|+|+|++|..+...|.....++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~ 40 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGD 40 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe
Confidence 469999999999999999998875446
No 261
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=89.43 E-value=0.34 Score=41.04 Aligned_cols=27 Identities=26% Similarity=0.437 Sum_probs=23.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
++||+|+|+|.+|..+.+.|.+.. +++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g-~~V 56 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG-HTV 56 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCE
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CEE
Confidence 379999999999999999998764 564
No 262
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=89.36 E-value=0.44 Score=38.77 Aligned_cols=93 Identities=15% Similarity=0.119 Sum_probs=48.2
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEee-cCCCCCCCcccC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG-VRNPEEIPWAET 81 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~-~~~~~~~~~~~~ 81 (254)
..+|-|+|+|.+|...++.|++.. .++.-+. .... .... ... ..+ . +.... ..+++++ +
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~G-A~VtVva-p~~~---~~l~--~l~-~~~-~-------i~~i~~~~~~~dL----~ 90 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEG-AAITVVA-PTVS---AEIN--EWE-AKG-Q-------LRVKRKKVGEEDL----L 90 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGC-CCEEEEC-SSCC---HHHH--HHH-HTT-S-------CEEECSCCCGGGS----S
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEC-CCCC---HHHH--HHH-HcC-C-------cEEEECCCCHhHh----C
Confidence 369999999999999999999874 4444332 1100 0000 000 111 1 11111 1223333 6
Q ss_pred CCcEEEEecCCccCHHHHHHHHHCCCCeEEecCCCC
Q 025368 82 GAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK 117 (254)
Q Consensus 82 ~~Dvv~~a~~~~~s~~~~~~~~~~G~~~~viS~~~~ 117 (254)
++|+||-||+....-..+....+.|+ .|-.+|++
T Consensus 91 ~adLVIaAT~d~~~N~~I~~~ak~gi--~VNvvD~p 124 (223)
T 3dfz_A 91 NVFFIVVATNDQAVNKFVKQHIKNDQ--LVNMASSF 124 (223)
T ss_dssp SCSEEEECCCCTHHHHHHHHHSCTTC--EEEC----
T ss_pred CCCEEEECCCCHHHHHHHHHHHhCCC--EEEEeCCc
Confidence 79999999987654444444334565 44345543
No 263
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.35 E-value=0.3 Score=41.96 Aligned_cols=30 Identities=20% Similarity=0.187 Sum_probs=23.8
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+.||+|+|+|.+|..+...|+++. +++..
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G-~~V~l 34 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGG-FRVKL 34 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT-CCEEE
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCC-CEEEE
Confidence 3479999999999999999998874 66543
No 264
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=89.29 E-value=0.63 Score=41.11 Aligned_cols=92 Identities=13% Similarity=0.178 Sum_probs=48.5
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC----CCc-e-eEEeeeeeeccccccccccce-------eecCCeeEEECCEEEEEee
Q 025368 3 KVKIGINGFGRIGRLVARVILQR----DDV-E-LVATYMFKYDSVHGQWKHHEL-------KVKDDKTLLFGEKPVTVFG 69 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~----p~~-~-v~~~~~~~~~s~~g~~~~~~v-------~~~~g~~l~~~~~~~~~~~ 69 (254)
+.||+|+|+|..|..|...|.++ +.. . -+.+..+..+ ..++..-..+ .+-+| +.+. ..+...
T Consensus 34 p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e-~~~~~~~e~in~~~~N~~YLpg--v~Lp-~~i~~t- 108 (391)
T 4fgw_A 34 PFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEE-INGEKLTEIINTRHQNVKYLPG--ITLP-DNLVAN- 108 (391)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCB-SSSCBHHHHHTTTCCBTTTBTT--CCCC-SSEEEE-
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchH-hhhHHHHHHHHhcCcCcccCCC--CcCC-CCcEEe-
Confidence 36999999999999999999753 211 1 1333333211 0000000000 00011 1111 124432
Q ss_pred cCCCCCCCcccCCCcEEEEecCCccCHHHHHHHH
Q 025368 70 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHL 103 (254)
Q Consensus 70 ~~~~~~~~~~~~~~Dvv~~a~~~~~s~~~~~~~~ 103 (254)
.|.++. ..++|+||++.|+..-++.++.+.
T Consensus 109 -~dl~~a---l~~ad~ii~avPs~~~r~~l~~l~ 138 (391)
T 4fgw_A 109 -PDLIDS---VKDVDIIVFNIPHQFLPRICSQLK 138 (391)
T ss_dssp -SCHHHH---HTTCSEEEECSCGGGHHHHHHHHT
T ss_pred -CCHHHH---HhcCCEEEEECChhhhHHHHHHhc
Confidence 333222 368999999999987777776654
No 265
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=89.27 E-value=0.38 Score=40.67 Aligned_cols=32 Identities=25% Similarity=0.481 Sum_probs=25.7
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|+.++|.|.|+ |++|+.|++.|+++. .++..+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~ 33 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKG-YEVYGA 33 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEE
Confidence 66679999999 999999999999874 676554
No 266
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.26 E-value=0.29 Score=44.53 Aligned_cols=30 Identities=33% Similarity=0.473 Sum_probs=24.6
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
|+++||+|+|+|.+|..+.+.|.++. +++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G-~~V~ 42 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRG-YTVS 42 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTT-CCEE
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCC-CeEE
Confidence 77899999999999999999999874 5653
No 267
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=89.13 E-value=0.37 Score=41.14 Aligned_cols=28 Identities=29% Similarity=0.331 Sum_probs=23.9
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
++||+|+|+|++|..+.+.|.+.. +++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~ 58 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAG-YALQ 58 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTT-CEEE
T ss_pred CCEEEEECccHHHHHHHHHHHhCC-CeEE
Confidence 469999999999999999999874 6654
No 268
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=89.08 E-value=0.34 Score=41.45 Aligned_cols=28 Identities=25% Similarity=0.400 Sum_probs=23.5
Q ss_pred CC-CcEEEEEcc-CHHHHHHHHHHHcCCCc
Q 025368 1 MG-KVKIGINGF-GRIGRLVARVILQRDDV 28 (254)
Q Consensus 1 M~-~~~V~IvG~-G~~G~~l~~~L~~~p~~ 28 (254)
|. ++||.|+|+ |++|..+++.|.....+
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~ 30 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEML 30 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCC
Confidence 54 369999999 99999999999887543
No 269
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.03 E-value=0.28 Score=40.82 Aligned_cols=26 Identities=19% Similarity=0.342 Sum_probs=22.3
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
+||+|+|+|.+|..+.+.|.+ .+++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~--g~~V~ 27 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR--RFPTL 27 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT--TSCEE
T ss_pred CeEEEEcccHHHHHHHHHHhC--CCeEE
Confidence 599999999999999999887 46653
No 270
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.92 E-value=0.28 Score=42.81 Aligned_cols=28 Identities=29% Similarity=0.370 Sum_probs=23.4
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
++||+|+|+|++|..+...|.+.. .++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G-~~V~ 56 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG-QKVR 56 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT-CCEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCC-CeEE
Confidence 579999999999999999998764 4543
No 271
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=88.92 E-value=0.42 Score=41.40 Aligned_cols=31 Identities=13% Similarity=0.205 Sum_probs=25.6
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|.|+ |++|+.|++.|+++...+|..+
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~ 63 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVV 63 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEE
Confidence 468999999 9999999999998742566554
No 272
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=88.83 E-value=0.24 Score=41.36 Aligned_cols=28 Identities=25% Similarity=0.419 Sum_probs=23.4
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
|+||+|+|+|.+|..+.+.|.+.. +++.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g-~~V~ 30 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAG-HQLH 30 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTT-CEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC-CEEE
Confidence 469999999999999999998774 6654
No 273
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=88.66 E-value=0.49 Score=40.05 Aligned_cols=30 Identities=27% Similarity=0.447 Sum_probs=25.4
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|||.|.|+ |++|+.|++.|++++..++..+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~ 31 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGL 31 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEE
Confidence 38999999 9999999999998755676654
No 274
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=88.58 E-value=0.35 Score=41.78 Aligned_cols=30 Identities=20% Similarity=0.336 Sum_probs=25.4
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|||.|.|+ |++|+.|++.|.+++.+++..+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~ 31 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEV 31 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence 38999999 9999999999998875566554
No 275
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=88.54 E-value=0.48 Score=39.94 Aligned_cols=29 Identities=24% Similarity=0.334 Sum_probs=24.9
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|.|.|+ |++|+.|++.|.++. .++..+
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~ 31 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-LSVVVV 31 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CEEEEE
Confidence 59999999 999999999999874 666554
No 276
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=88.25 E-value=0.43 Score=40.01 Aligned_cols=28 Identities=32% Similarity=0.613 Sum_probs=23.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
++||+|+|+|.+|..+.+.|.+.. +++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g-~~V~ 31 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEG-VTVY 31 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTT-CEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CeEE
Confidence 479999999999999999998774 5653
No 277
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=88.17 E-value=0.34 Score=40.45 Aligned_cols=32 Identities=28% Similarity=0.386 Sum_probs=25.9
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcC-CCceeEEe
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
|+ ++|.|.|+ |++|+.|++.|.++ +..++..+
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~ 34 (312)
T 2yy7_A 1 MN-PKILIIGACGQIGTELTQKLRKLYGTENVIAS 34 (312)
T ss_dssp CC-CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEE
T ss_pred CC-ceEEEECCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 53 68999999 99999999999876 34666554
No 278
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=87.95 E-value=0.45 Score=40.35 Aligned_cols=28 Identities=21% Similarity=0.611 Sum_probs=23.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
++||+|+|+|++|..+.+.|.+.. +++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G-~~V~ 36 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG-KRVA 36 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT-CCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEE
Confidence 469999999999999999998874 5653
No 279
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=87.92 E-value=0.58 Score=39.20 Aligned_cols=30 Identities=23% Similarity=0.372 Sum_probs=25.3
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.++|.|.|+ |++|+.|++.|.++. .++..+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~ 32 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN-WHAVGC 32 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC-CeEEEE
Confidence 369999999 999999999999875 666554
No 280
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=87.83 E-value=0.41 Score=41.60 Aligned_cols=28 Identities=29% Similarity=0.497 Sum_probs=23.9
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCc
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDV 28 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~ 28 (254)
|+.+||+|+|| |.+|+.|.-+|...+-+
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l~ 50 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGALL 50 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTTT
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhcccc
Confidence 55689999999 99999999988877643
No 281
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=87.81 E-value=0.62 Score=39.89 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=21.1
Q ss_pred cEEEEEccCHHHHHHHHHHHcCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
.||+|+|+|.+|..++..|...+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g 31 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKE 31 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 59999999999999999998775
No 282
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=87.78 E-value=0.53 Score=40.13 Aligned_cols=29 Identities=28% Similarity=0.400 Sum_probs=23.7
Q ss_pred CC-CcEEEEEccCHHHHHHHHHHHcCCCce
Q 025368 1 MG-KVKIGINGFGRIGRLVARVILQRDDVE 29 (254)
Q Consensus 1 M~-~~~V~IvG~G~~G~~l~~~L~~~p~~~ 29 (254)
|. ++||+|+|+|.+|..++..|......+
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~ 30 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLAD 30 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCce
Confidence 54 369999999999999999998775335
No 283
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.75 E-value=0.37 Score=38.47 Aligned_cols=29 Identities=28% Similarity=0.287 Sum_probs=24.3
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|||.|+|+|.+|+.+++.|.+.. .++..+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g-~~v~vi 29 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK-YGVVII 29 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT-CCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEE
Confidence 38999999999999999998773 566554
No 284
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=87.66 E-value=0.42 Score=40.56 Aligned_cols=26 Identities=23% Similarity=0.471 Sum_probs=22.8
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCC
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRD 26 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p 26 (254)
|++++|.|.|+ |++|+.|++.|+++.
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g 38 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDG 38 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHC
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcC
Confidence 34579999999 999999999998875
No 285
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=87.66 E-value=0.55 Score=39.79 Aligned_cols=29 Identities=28% Similarity=0.427 Sum_probs=24.8
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|.|.|+ |++|+.|++.|++.. .++..+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~ 31 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG-IDLIVF 31 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC-CEEEEE
Confidence 59999999 999999999999874 666554
No 286
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=87.64 E-value=0.51 Score=40.36 Aligned_cols=31 Identities=10% Similarity=0.104 Sum_probs=25.8
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
..++|.|.|+ |++|+.|++.|.++. .++..+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~ 39 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGY 39 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCC-CeEEEE
Confidence 3479999999 999999999999875 566554
No 287
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=87.63 E-value=0.32 Score=40.67 Aligned_cols=27 Identities=19% Similarity=0.421 Sum_probs=22.9
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
+||+|+|+|++|..+.+.|.++. +++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~ 28 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG-FDVT 28 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT-CCEE
T ss_pred CeEEEEccCHHHHHHHHHHHHCC-CeEE
Confidence 59999999999999999998774 5543
No 288
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=87.55 E-value=0.18 Score=43.96 Aligned_cols=97 Identities=13% Similarity=0.119 Sum_probs=50.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGA 83 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (254)
.+++|+|+|.+|+..++.|.....++-+.++.+..+. ..++. ... .. ..+..+..+ .++++. ..++
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~-a~~la-~~~--~~-----~~g~~~~~~--~~~~ea---v~~a 195 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLA-TAKLI-ANL--KE-----YSGLTIRRA--SSVAEA---VKGV 195 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHH-HHHHH-HHH--TT-----CTTCEEEEC--SSHHHH---HTTC
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHH-HHHHH-HHH--Hh-----ccCceEEEe--CCHHHH---HhcC
Confidence 6899999999999998887644345555665543211 01110 000 00 002112222 233322 3579
Q ss_pred cEEEEecCCccCHHHH-HHHHHCCCCeEEe--cCCC
Q 025368 84 EYVVESTGVFTDKDKA-AAHLKGGAKKVII--SAPS 116 (254)
Q Consensus 84 Dvv~~a~~~~~s~~~~-~~~~~~G~~~~vi--S~~~ 116 (254)
|+|+.|||.......+ ...++.|. .|+ +++.
T Consensus 196 DiVi~aTps~~~~pvl~~~~l~~G~--~V~~vgs~~ 229 (350)
T 1x7d_A 196 DIITTVTADKAYATIITPDMLEPGM--HLNAVGGDC 229 (350)
T ss_dssp SEEEECCCCSSEEEEECGGGCCTTC--EEEECSCCB
T ss_pred CEEEEeccCCCCCceecHHHcCCCC--EEEECCCCC
Confidence 9999999986311111 23456776 443 5543
No 289
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.34 E-value=0.63 Score=38.84 Aligned_cols=27 Identities=22% Similarity=0.496 Sum_probs=23.7
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
+||+|+|+|++|..+.+.|.++. +++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G-~~V~ 28 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG-CSVT 28 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CeEE
Confidence 59999999999999999999884 6654
No 290
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=87.33 E-value=0.49 Score=40.65 Aligned_cols=25 Identities=20% Similarity=0.282 Sum_probs=22.2
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCC
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDD 27 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~ 27 (254)
++||+|+|+ |.+|..++..|...+.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~ 30 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDM 30 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCC
Confidence 479999999 9999999999988764
No 291
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=87.15 E-value=0.6 Score=38.30 Aligned_cols=78 Identities=17% Similarity=0.174 Sum_probs=45.2
Q ss_pred EEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCCCc
Q 025368 5 KIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAE 84 (254)
Q Consensus 5 ~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~D 84 (254)
||+|+|+|.+|..+.+.|.++. +++.. +.+.... .. . ..+. .. |.. .++++. ..++|
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g-~~V~~-~~~~~~~--~~-~-~~~~-~~-------g~~------~~~~~~---~~~aD 58 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRG-VEVVT-SLEGRSP--ST-I-ERAR-TV-------GVT------ETSEED---VYSCP 58 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT-CEEEE-CCTTCCH--HH-H-HHHH-HH-------TCE------ECCHHH---HHTSS
T ss_pred eEEEEechHHHHHHHHHHHHCC-CeEEE-eCCccCH--HH-H-HHHH-HC-------CCc------CCHHHH---HhcCC
Confidence 8999999999999999998774 56543 2210000 00 0 0000 01 111 122222 25799
Q ss_pred EEEEecCCccCHHHHHHHHHC
Q 025368 85 YVVESTGVFTDKDKAAAHLKG 105 (254)
Q Consensus 85 vv~~a~~~~~s~~~~~~~~~~ 105 (254)
+||.|+|.....+.+..+.+.
T Consensus 59 vvi~~v~~~~~~~~~~~~~~~ 79 (264)
T 1i36_A 59 VVISAVTPGVALGAARRAGRH 79 (264)
T ss_dssp EEEECSCGGGHHHHHHHHHTT
T ss_pred EEEEECCCHHHHHHHHHHHHh
Confidence 999999997655656555543
No 292
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=87.07 E-value=0.55 Score=40.18 Aligned_cols=30 Identities=17% Similarity=0.279 Sum_probs=24.4
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|.|.|+ |++|+.|++.|.+....++..+
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~ 77 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVV 77 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEE
Confidence 68999999 9999999999998753566554
No 293
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=87.06 E-value=0.32 Score=40.11 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=25.7
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEE
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~ 32 (254)
|+|++|-|.|+ |.+|+.+++.|.++. .++..
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G-~~V~~ 32 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMA-EILRL 32 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGE-EEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcC-CEEEE
Confidence 77789999999 999999999999874 45443
No 294
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=86.90 E-value=0.73 Score=41.59 Aligned_cols=30 Identities=27% Similarity=0.472 Sum_probs=24.8
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.++||+|+|+|.+|..+...|.++. +++..
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G-~~V~l 65 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVG-ISVVA 65 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTT-CEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC-CeEEE
Confidence 4569999999999999999998874 66543
No 295
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=86.77 E-value=0.81 Score=38.56 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=25.2
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.++|.|.|+ |++|+.|++.|+++. .++..+
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~ 41 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHG-YKVRGT 41 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-CEEEEE
Confidence 479999999 999999999999874 566554
No 296
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.73 E-value=0.55 Score=36.24 Aligned_cols=29 Identities=24% Similarity=0.265 Sum_probs=23.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcC-CCceeEEe
Q 025368 4 VKIGINGFGRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
.+|.|+|+|.+|..+++.|.++ . .++..+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vi 69 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG-KISLGI 69 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC-SCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhccC-CeEEEE
Confidence 5899999999999999999865 4 455544
No 297
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=86.62 E-value=0.52 Score=40.92 Aligned_cols=26 Identities=27% Similarity=0.319 Sum_probs=22.2
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCC
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRD 26 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p 26 (254)
|+++||+|+|+ |++|..++..++...
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g 32 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMR 32 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcC
Confidence 55789999998 999999998777664
No 298
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=86.48 E-value=0.73 Score=38.13 Aligned_cols=78 Identities=15% Similarity=0.119 Sum_probs=44.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGA 83 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (254)
|||+|+|+|.+|..+.+.|.+.. +++... .+..+. .. .+. ..| ...... .+.+++ .++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~-~~~~~~-~~-----~~~-~~g-------~~~~~~--~~~~~~----~~~ 58 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG-HYLIGV-SRQQST-CE-----KAV-ERQ-------LVDEAG--QDLSLL----QTA 58 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CSCHHH-HH-----HHH-HTT-------SCSEEE--SCGGGG----TTC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC-CEEEEE-ECCHHH-HH-----HHH-hCC-------CCcccc--CCHHHh----CCC
Confidence 38999999999999999998774 454332 221110 00 000 111 000111 223322 468
Q ss_pred cEEEEecCCccCHHHHHHHH
Q 025368 84 EYVVESTGVFTDKDKAAAHL 103 (254)
Q Consensus 84 Dvv~~a~~~~~s~~~~~~~~ 103 (254)
|+||.|+|+....+.++.+.
T Consensus 59 D~vi~av~~~~~~~~~~~l~ 78 (279)
T 2f1k_A 59 KIIFLCTPIQLILPTLEKLI 78 (279)
T ss_dssp SEEEECSCHHHHHHHHHHHG
T ss_pred CEEEEECCHHHHHHHHHHHH
Confidence 99999999876666665543
No 299
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.41 E-value=0.83 Score=36.04 Aligned_cols=28 Identities=21% Similarity=0.407 Sum_probs=23.0
Q ss_pred cEEEEEc-cCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGING-FGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG-~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
|||+|+| +|++|..+++.|.++. .++..
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~ 29 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG-HEIVV 29 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CEEEE
Confidence 3899999 5999999999998874 56543
No 300
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=86.34 E-value=0.73 Score=39.81 Aligned_cols=28 Identities=21% Similarity=0.377 Sum_probs=24.0
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
|||.|||+|.+|..+...|.++. +++.-
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G-~~v~v 29 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG-IKVTI 29 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CCEEE
Confidence 69999999999999999999884 66543
No 301
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=86.13 E-value=0.75 Score=39.59 Aligned_cols=26 Identities=19% Similarity=0.262 Sum_probs=22.7
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCc
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDV 28 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~ 28 (254)
.+||+|+|+|++|..++..|...+.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~ 30 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGIT 30 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC
Confidence 36999999999999999999887644
No 302
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=86.00 E-value=0.77 Score=38.94 Aligned_cols=31 Identities=23% Similarity=0.164 Sum_probs=25.4
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|+++|.|.|+ |++|+.|++.|+++. .++..+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~ 32 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG-YLPVVI 32 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEE
Confidence 1369999999 999999999999874 566554
No 303
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=85.99 E-value=1.5 Score=39.31 Aligned_cols=88 Identities=16% Similarity=0.177 Sum_probs=50.2
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC-
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG- 82 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~- 82 (254)
.||.|+|.|.+|..++++|.++. .++...-...+ ...... . .|.-.| +.+....+++++ ..+
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G-~~V~~~D~~~~--~~~~~~-~--------~L~~~g--i~~~~g~~~~~~---~~~~ 72 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG-AIVTVNDGKPF--DENPTA-Q--------SLLEEG--IKVVCGSHPLEL---LDED 72 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT-CEEEEEESSCG--GGCHHH-H--------HHHHTT--CEEEESCCCGGG---GGSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEEeCCcc--cCChHH-H--------HHHhCC--CEEEECCChHHh---hcCC
Confidence 69999999999999999999884 66544211100 000000 0 111012 233222333332 244
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCCC
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGAK 108 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~~ 108 (254)
+|+|+-+.+-..+...+.++.+.|++
T Consensus 73 ~d~vv~spgi~~~~p~~~~a~~~gi~ 98 (451)
T 3lk7_A 73 FCYMIKNPGIPYNNPMVKKALEKQIP 98 (451)
T ss_dssp EEEEEECTTSCTTSHHHHHHHHTTCC
T ss_pred CCEEEECCcCCCCChhHHHHHHCCCc
Confidence 89999876655555566778889983
No 304
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=85.96 E-value=0.45 Score=41.47 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=20.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC
Q 025368 3 KVKIGINGFGRIGRLVARVILQR 25 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~ 25 (254)
|+||+|+|+|.+|..+...|.+.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHc
Confidence 46999999999999999988754
No 305
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=85.75 E-value=0.67 Score=39.70 Aligned_cols=28 Identities=29% Similarity=0.407 Sum_probs=24.0
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.|... .+++..
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~-G~~V~~ 167 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAW-GFPLRC 167 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEE
Confidence 6899999999999999999877 466654
No 306
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=85.75 E-value=0.67 Score=39.56 Aligned_cols=29 Identities=38% Similarity=0.441 Sum_probs=24.7
Q ss_pred EEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 5 KIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
||.|.|+ |++|+.|++.|++++..++..+
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~ 31 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNI 31 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEE
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEE
Confidence 8999999 9999999999998645676654
No 307
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=85.73 E-value=0.93 Score=38.30 Aligned_cols=30 Identities=30% Similarity=0.338 Sum_probs=25.4
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|.|+ |.+|+.+++.|+++. .++..+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~ 35 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG-YDVVIA 35 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC-CcEEEE
Confidence 469999999 999999999999884 666554
No 308
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=85.67 E-value=0.65 Score=39.97 Aligned_cols=26 Identities=23% Similarity=0.337 Sum_probs=22.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCce
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVE 29 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~ 29 (254)
+||+|+|+|++|..+...|.....++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~ 35 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELAD 35 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe
Confidence 69999999999999999998775446
No 309
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=85.60 E-value=0.76 Score=43.22 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=26.5
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++++|.|.|+ |++|+.|++.|++.+..++..+
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~ 346 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGL 346 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEE
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEE
Confidence 3579999999 9999999999998754676554
No 310
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=85.51 E-value=0.61 Score=42.39 Aligned_cols=29 Identities=17% Similarity=0.293 Sum_probs=24.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
+.||+|+|+|.+|..+...|++.. +++..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG-~~V~l 33 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHG-HQVLL 33 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CeEEE
Confidence 469999999999999999998774 56543
No 311
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=85.51 E-value=0.66 Score=41.44 Aligned_cols=27 Identities=30% Similarity=0.569 Sum_probs=23.2
Q ss_pred EEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 5 KIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 5 ~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
||+|+|+||+|..+...|.++. .++..
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G-~~V~~ 28 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARG-HEVIG 28 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT-CEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEE
Confidence 8999999999999999998874 56544
No 312
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=85.51 E-value=0.86 Score=39.14 Aligned_cols=28 Identities=36% Similarity=0.574 Sum_probs=23.5
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|++|+.+++.|.... +++..
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~ 183 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFG-VQRFL 183 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEE
Confidence 68999999999999999998763 66543
No 313
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=85.41 E-value=0.67 Score=39.09 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=26.6
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|++++|.|+|+|..|..++..|.++ .+++.-+
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vi 32 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRS-GLSYVIL 32 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHS-SCCEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCCEEEE
Confidence 7778999999999999999999887 3665443
No 314
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=85.35 E-value=0.3 Score=39.99 Aligned_cols=29 Identities=14% Similarity=0.105 Sum_probs=24.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+||+|+|+|.+|..|.+.|.+.. +++..
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G-~~V~~ 34 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVG-HYVTV 34 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTT-CEEEE
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCC-CEEEE
Confidence 479999999999999999998874 55544
No 315
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=85.31 E-value=0.94 Score=39.00 Aligned_cols=29 Identities=24% Similarity=0.368 Sum_probs=25.0
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|.|.|+ |++|+.|++.|+++. .++..+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~ 54 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG-YEVHGI 54 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-CEEEEE
Confidence 68999999 999999999999874 666554
No 316
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=85.15 E-value=1 Score=38.05 Aligned_cols=30 Identities=23% Similarity=0.331 Sum_probs=25.5
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.++|.|.|+ |.+|+.|++.|+++. .++..+
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~ 50 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQG-HEILVI 50 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGT-CEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEE
Confidence 469999999 999999999999875 676554
No 317
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=85.10 E-value=0.9 Score=39.11 Aligned_cols=28 Identities=32% Similarity=0.557 Sum_probs=23.7
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|++|+.+++.|.... +++..
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~ 178 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFN-MRILY 178 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCC-CEEEE
Confidence 68999999999999999998764 66543
No 318
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=85.09 E-value=0.89 Score=39.44 Aligned_cols=28 Identities=32% Similarity=0.491 Sum_probs=23.9
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+++.|... .+++.+
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~ 201 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF-GLAIHY 201 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT-TCEEEE
T ss_pred CEEEEEEeChhHHHHHHHHHHC-CCEEEE
Confidence 5899999999999999999876 466544
No 319
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=85.08 E-value=0.97 Score=38.99 Aligned_cols=29 Identities=21% Similarity=0.310 Sum_probs=24.9
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|.|.|+ |++|+.|++.|.++. .+|..+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~ 58 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG-YEVHGL 58 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC-CEEEEE
Confidence 68999999 999999999999875 566554
No 320
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=85.01 E-value=0.86 Score=39.32 Aligned_cols=28 Identities=32% Similarity=0.496 Sum_probs=24.0
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.|... .+++.+
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~-G~~V~~ 169 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLC 169 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred ceEEEECcCHHHHHHHHHHHHC-cCEEEE
Confidence 5899999999999999999877 466544
No 321
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=85.00 E-value=0.98 Score=38.07 Aligned_cols=31 Identities=16% Similarity=0.342 Sum_probs=25.5
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEee
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVATY 34 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~~ 34 (254)
++||.|.|+ |++|+.|++.|.++. .++..+.
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~ 45 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKG-YRVHGLV 45 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CeEEEEe
Confidence 479999999 999999999999874 6765543
No 322
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=84.97 E-value=0.59 Score=39.63 Aligned_cols=23 Identities=39% Similarity=0.674 Sum_probs=20.9
Q ss_pred cEEEEEccCHHHHHHHHHHHcCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
+||+|+|+|.+|..++..|....
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g 24 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQG 24 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 59999999999999999988764
No 323
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=84.93 E-value=0.81 Score=40.72 Aligned_cols=33 Identities=21% Similarity=0.156 Sum_probs=26.0
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcC-CCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
|++++|.|||+|..|...+..|.+. ++.++.-+
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vi 34 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVF 34 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEE
Confidence 7788999999999999999988765 45665443
No 324
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=84.88 E-value=0.93 Score=39.25 Aligned_cols=28 Identities=29% Similarity=0.442 Sum_probs=23.7
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+++.|... .+++.+
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~-G~~V~~ 199 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAF-GMSVRY 199 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEE
Confidence 6999999999999999999876 366543
No 325
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=84.82 E-value=0.92 Score=41.14 Aligned_cols=30 Identities=13% Similarity=0.299 Sum_probs=24.7
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.|||+|+|+||+|..+...|++.. .++..+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G-~~V~~~ 37 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG-HDVFCL 37 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CceEEEECcCHHHHHHHHHHHhCC-CEEEEE
Confidence 479999999999999999998874 565543
No 326
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=84.76 E-value=0.36 Score=39.55 Aligned_cols=30 Identities=13% Similarity=0.177 Sum_probs=24.7
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|++|.|.|+ |.+|+.|++.|.++. .++..+
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~ 32 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLA-HEVRLS 32 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTE-EEEEEC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCC-CEEEEE
Confidence 469999999 999999999998874 555443
No 327
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=84.54 E-value=0.81 Score=39.47 Aligned_cols=28 Identities=36% Similarity=0.477 Sum_probs=23.4
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+++.|.... +++..
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G-~~V~~ 192 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFD-CPISY 192 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEE
Confidence 58999999999999999998763 66543
No 328
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=84.52 E-value=0.55 Score=40.19 Aligned_cols=22 Identities=27% Similarity=0.536 Sum_probs=19.9
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcC
Q 025368 4 VKIGINGF-GRIGRLVARVILQR 25 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~ 25 (254)
|||+|+|| |++|..++.+|..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~ 23 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ 23 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 39999997 99999999999876
No 329
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=84.44 E-value=0.63 Score=39.12 Aligned_cols=23 Identities=26% Similarity=0.554 Sum_probs=20.5
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC
Q 025368 3 KVKIGINGFGRIGRLVARVILQR 25 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~ 25 (254)
+|||+|+|+|.+|..+...|.+.
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~ 30 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALR 30 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhC
Confidence 36999999999999999988765
No 330
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=84.36 E-value=0.88 Score=40.19 Aligned_cols=27 Identities=22% Similarity=0.359 Sum_probs=22.8
Q ss_pred EEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 5 KIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 5 ~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
||+|+|+||+|..+...|.+ ..++..+
T Consensus 2 kI~VIG~G~vG~~~A~~La~--G~~V~~~ 28 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL--QNEVTIV 28 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT--TSEEEEE
T ss_pred EEEEECCCHHHHHHHHHHhC--CCEEEEE
Confidence 89999999999999999887 3665543
No 331
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=84.29 E-value=0.99 Score=38.87 Aligned_cols=28 Identities=39% Similarity=0.647 Sum_probs=23.5
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+++.|.... +++..
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G-~~V~~ 174 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFG-VKLYY 174 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEE
Confidence 68999999999999999998763 66543
No 332
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=84.20 E-value=0.92 Score=38.54 Aligned_cols=28 Identities=21% Similarity=0.476 Sum_probs=23.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.|.... +++..
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~ 152 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALG-AQVRG 152 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTT-CEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEE
Confidence 68999999999999999998763 66543
No 333
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=84.16 E-value=1 Score=38.98 Aligned_cols=28 Identities=29% Similarity=0.413 Sum_probs=23.4
Q ss_pred cEEEEEccCHHHHHHHHHHH-cCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVIL-QRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~-~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+++.+. ... +++..
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G-~~V~~ 192 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLG-MKLVY 192 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEE
T ss_pred CEEEEEEECHHHHHHHHHHHHhcC-CEEEE
Confidence 58999999999999999998 663 66543
No 334
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=84.13 E-value=1 Score=38.44 Aligned_cols=24 Identities=13% Similarity=0.284 Sum_probs=21.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
++||+|+|+|.+|..++..|...+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~ 29 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQG 29 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC
Confidence 479999999999999999887764
No 335
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=83.96 E-value=1 Score=39.20 Aligned_cols=28 Identities=32% Similarity=0.547 Sum_probs=24.1
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.|... .+++.+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~ 188 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAF-GMNVLV 188 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHhC-CCEEEE
Confidence 6999999999999999999877 477654
No 336
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=83.89 E-value=1.1 Score=38.54 Aligned_cols=28 Identities=29% Similarity=0.675 Sum_probs=23.7
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+++.|... .+++..
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~ 174 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM-GATVIG 174 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEE
Confidence 5899999999999999999876 466543
No 337
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=83.86 E-value=1 Score=40.63 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=25.0
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+.||+|+|+|.+|..+...+++. .++|..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~a-G~~V~l 82 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLA-GIETFL 82 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC-CCeEEE
Confidence 346999999999999999999887 466544
No 338
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=83.80 E-value=0.85 Score=40.07 Aligned_cols=31 Identities=26% Similarity=0.419 Sum_probs=25.2
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.++|.|.|+ |.+|++|++.|+++...++..+
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~ 66 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVV 66 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEEEE
Confidence 469999999 9999999999998853455444
No 339
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=83.70 E-value=1.2 Score=37.49 Aligned_cols=30 Identities=23% Similarity=0.359 Sum_probs=24.9
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|.|+ |++|+.|++.|++.. .++..+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~ 39 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKG-YAVNTT 39 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC-CEEEEE
Confidence 368999999 999999999999874 566543
No 340
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=83.70 E-value=1.1 Score=38.08 Aligned_cols=27 Identities=37% Similarity=0.690 Sum_probs=23.2
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
++|||+|+|.+|+.+.+.|.... +++.
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~ 171 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFG-MRVV 171 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE
T ss_pred CEEEEEEECHHHHHHHHHHHHCC-CEEE
Confidence 68999999999999999998774 6653
No 341
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=83.69 E-value=0.79 Score=41.07 Aligned_cols=33 Identities=12% Similarity=0.082 Sum_probs=24.4
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcC-CCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
|++++|.|||+|..|...+..|.+. +..++.-+
T Consensus 1 M~~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvi 34 (472)
T 3iwa_A 1 MSLKHVVVIGAVALGPKAACRFKRLDPEAHVTMI 34 (472)
T ss_dssp ---CEEEEECCSSHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhCcCCCEEEE
Confidence 7778999999999999999988765 45665543
No 342
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=83.62 E-value=0.89 Score=38.43 Aligned_cols=28 Identities=36% Similarity=0.596 Sum_probs=23.9
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.|... .+++..
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~ 150 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF-GMRVIA 150 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEE
T ss_pred chheeeccCchhHHHHHHHHhh-CcEEEE
Confidence 6999999999999999999876 466554
No 343
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=83.57 E-value=1.2 Score=38.06 Aligned_cols=27 Identities=19% Similarity=0.379 Sum_probs=22.9
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
.+||+|+|+|.+|..+.+.|.+.. .++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G-~~V 40 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENG-EEV 40 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCC-CeE
Confidence 479999999999999999988763 454
No 344
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=83.54 E-value=1 Score=39.10 Aligned_cols=28 Identities=32% Similarity=0.490 Sum_probs=23.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+++.|... .+++.+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~-G~~V~~ 192 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF-GCNLLY 192 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-CCEEEE
T ss_pred CEEeEEEeCHHHHHHHHHHHHC-CCEEEE
Confidence 5999999999999999999876 466543
No 345
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=83.54 E-value=1 Score=38.56 Aligned_cols=25 Identities=24% Similarity=0.238 Sum_probs=22.1
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCc
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDV 28 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~ 28 (254)
+||+|+|+|.+|..++-.|..++.+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~ 30 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIA 30 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCC
Confidence 6999999999999999998877644
No 346
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=83.49 E-value=0.87 Score=38.56 Aligned_cols=25 Identities=40% Similarity=0.543 Sum_probs=21.8
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCc
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDV 28 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~ 28 (254)
|||+|+|+|.+|..++..|..++.+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~ 25 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV 25 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC
Confidence 3999999999999999998877644
No 347
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=83.32 E-value=1.2 Score=38.69 Aligned_cols=28 Identities=29% Similarity=0.434 Sum_probs=23.7
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+++.|... .+++..
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~-G~~V~~ 196 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAF-GFNVLF 196 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEE
Confidence 6899999999999999999876 466543
No 348
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=83.30 E-value=1.2 Score=38.34 Aligned_cols=28 Identities=21% Similarity=0.500 Sum_probs=23.7
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+++.|... .+++..
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~ 173 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGF-GAKVIA 173 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEE
Confidence 5899999999999999999876 367543
No 349
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=83.21 E-value=1.3 Score=33.77 Aligned_cols=30 Identities=13% Similarity=0.135 Sum_probs=24.2
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|++|.|+|+|.+|.++...|.+.. .++.-+
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g-~~v~li 30 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAG-LKVLVL 30 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CcEEEE
Confidence 369999999999999999998773 554433
No 350
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=83.19 E-value=1.1 Score=38.72 Aligned_cols=28 Identities=29% Similarity=0.592 Sum_probs=24.0
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.|... .+++.+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~-G~~V~~ 176 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM-GAKVIA 176 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred CeEEEEecCHHHHHHHHHHhhC-CCEEEE
Confidence 5899999999999999999877 466554
No 351
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=83.10 E-value=1.3 Score=37.85 Aligned_cols=28 Identities=32% Similarity=0.552 Sum_probs=23.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+++.|.... +++..
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~ 174 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFD-MDIDY 174 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEE
Confidence 58999999999999999998764 66543
No 352
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=83.07 E-value=1.1 Score=35.92 Aligned_cols=32 Identities=25% Similarity=0.188 Sum_probs=25.8
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|+..+|.|+|+|.+|.++...|.++. .++.-+
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g-~~v~li 32 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKG-VRVGLL 32 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC-CCEEEE
Confidence 77789999999999999999998873 555443
No 353
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=83.05 E-value=1.3 Score=37.84 Aligned_cols=28 Identities=39% Similarity=0.617 Sum_probs=23.8
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.|.... +++..
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~ 170 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMG-MKVLA 170 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEE
Confidence 69999999999999999998774 66543
No 354
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=83.03 E-value=1.2 Score=39.29 Aligned_cols=28 Identities=21% Similarity=0.374 Sum_probs=24.0
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|.|.+|+.+.+.|... .+++..
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~-G~~V~~ 147 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL-GIRTLL 147 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEE
Confidence 5899999999999999999877 466554
No 355
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=82.96 E-value=0.67 Score=39.76 Aligned_cols=24 Identities=29% Similarity=0.415 Sum_probs=21.2
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCC
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRD 26 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p 26 (254)
++||+|+|+ |++|..++..|...+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g 32 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNP 32 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC
Confidence 479999997 999999999998764
No 356
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=82.94 E-value=1.3 Score=37.68 Aligned_cols=28 Identities=39% Similarity=0.640 Sum_probs=23.7
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.|.... +++..
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~ 170 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALG-MNILL 170 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred ceEEEEccCHHHHHHHHHHHHCC-CEEEE
Confidence 68999999999999999998774 66543
No 357
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=82.89 E-value=0.88 Score=37.92 Aligned_cols=26 Identities=23% Similarity=0.612 Sum_probs=22.3
Q ss_pred EEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 5 KIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 5 ~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
||+|+|+|.+|..+.+.|.+.. +++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g-~~V~ 27 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHG-YPLI 27 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTT-CCEE
T ss_pred eEEEEeccHHHHHHHHHHHHCC-CEEE
Confidence 8999999999999999998774 5543
No 358
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=82.81 E-value=0.96 Score=38.94 Aligned_cols=28 Identities=25% Similarity=0.359 Sum_probs=23.3
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.|... .+++.+
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~-G~~V~~ 173 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGW-GATLQY 173 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTS-CCEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEE
Confidence 6999999999999999998766 366543
No 359
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=82.74 E-value=1.4 Score=38.05 Aligned_cols=28 Identities=36% Similarity=0.571 Sum_probs=23.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|.|.+|+.+++.|... .+++.+
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~-G~~V~~ 193 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSF-GMKTIG 193 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEE
Confidence 5899999999999999999876 366543
No 360
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.60 E-value=1.4 Score=35.15 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=26.8
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCC-ceeEEe
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDD-VELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~-~~v~~~ 33 (254)
|++++|-|.|+ |.+|+++++.|+++.. ..+..+
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~ 35 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIAT 35 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEE
Confidence 66779999999 9999999999998853 555443
No 361
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=82.56 E-value=1.1 Score=40.30 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=24.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|.+|+|+|.||+|.-+.-.+++. .+++..+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~-G~~V~g~ 50 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL-GHRVVGY 50 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCcEEEE
Confidence 56999999999999999888866 3677664
No 362
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=82.52 E-value=1.2 Score=39.09 Aligned_cols=28 Identities=18% Similarity=0.350 Sum_probs=23.7
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|.|.+|+.+.+.|... .+++..
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~ 144 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGL-GWKVLV 144 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHC-CCEEEE
Confidence 6899999999999999999876 466543
No 363
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=82.46 E-value=1.2 Score=38.94 Aligned_cols=28 Identities=32% Similarity=0.599 Sum_probs=23.4
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+|||+|+|.+|+.+++.|... .+++.+
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f-G~~V~~ 204 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF-RARIRV 204 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS-CCEEEE
T ss_pred CEEEEecCCcccHHHHHhhhhC-CCEEEE
Confidence 5999999999999999998766 366544
No 364
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=82.46 E-value=1.4 Score=37.99 Aligned_cols=28 Identities=18% Similarity=0.469 Sum_probs=23.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+++.+.... +++..
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~ 174 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFG-AKVIT 174 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEE
Confidence 58999999999999999998763 66543
No 365
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=82.38 E-value=1.2 Score=37.91 Aligned_cols=26 Identities=27% Similarity=0.249 Sum_probs=23.0
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCC
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
|++++|.|||+|..|..++..|.+..
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g 27 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFG 27 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTT
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcC
Confidence 66689999999999999999998763
No 366
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=82.36 E-value=1.4 Score=37.70 Aligned_cols=29 Identities=24% Similarity=0.363 Sum_probs=24.7
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|.|.|+ |++|+.+++.|+++. .++..+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~ 31 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGI 31 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEE
Confidence 59999999 999999999999875 566554
No 367
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=82.94 E-value=0.27 Score=39.20 Aligned_cols=27 Identities=22% Similarity=0.295 Sum_probs=22.5
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
.+||+|+|+|.+|..+.+.|.+.. .++
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G-~~V 45 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCG-YSV 45 (201)
Confidence 469999999999999999988663 444
No 368
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=82.18 E-value=1.3 Score=38.13 Aligned_cols=28 Identities=32% Similarity=0.496 Sum_probs=23.9
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+|||+|+|.+|+++.+.+..- .+++.+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f-g~~v~~ 169 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLC 169 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred cEEEEECcchHHHHHHHhhccc-Cceeee
Confidence 5899999999999999999877 477654
No 369
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=82.00 E-value=1.5 Score=36.54 Aligned_cols=30 Identities=27% Similarity=0.529 Sum_probs=24.9
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|.|+ |++|+.|++.|++.. .++..+
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~ 42 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQN-VEVFGT 42 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred cceEEEECCCChHHHHHHHHHHHCC-CEEEEE
Confidence 479999999 999999999999874 566554
No 370
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=81.96 E-value=1.4 Score=36.04 Aligned_cols=30 Identities=17% Similarity=0.063 Sum_probs=24.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|++|.|+|+|..|...+..|.++. +++.-+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g-~~v~li 31 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRAR-KNILLV 31 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC-CCEEEE
Confidence 479999999999999999998774 555443
No 371
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=81.94 E-value=1.6 Score=37.10 Aligned_cols=28 Identities=32% Similarity=0.475 Sum_probs=22.4
Q ss_pred cEEEEEccCHHHHHHHHHHHcCC-CceeE
Q 025368 4 VKIGINGFGRIGRLVARVILQRD-DVELV 31 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p-~~~v~ 31 (254)
|||+|+|+|++|..+...|...+ ..++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~ 29 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELV 29 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE
Confidence 39999999999999999988753 23443
No 372
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=81.82 E-value=1.2 Score=37.67 Aligned_cols=27 Identities=19% Similarity=0.320 Sum_probs=22.3
Q ss_pred EEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 5 KIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 5 ~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
||+|+|+|.+|..+.+.|.+.. .++..
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g-~~V~~ 28 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNG-NEVRI 28 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHC-CEEEE
T ss_pred EEEEECcCHHHHHHHHHHHhCC-CeEEE
Confidence 8999999999999999988764 45443
No 373
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=81.64 E-value=1.4 Score=38.06 Aligned_cols=30 Identities=17% Similarity=0.204 Sum_probs=25.1
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|.|+ |++|+.|++.|+++. .+|..+
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~ 41 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKN-YEVCIV 41 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCC-CeEEEE
Confidence 469999999 999999999999874 576655
No 374
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=81.63 E-value=1.4 Score=37.72 Aligned_cols=26 Identities=19% Similarity=0.222 Sum_probs=22.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCc
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDV 28 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~ 28 (254)
++||+|+|+|.+|..++-.|..++.+
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~ 34 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIA 34 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCC
Confidence 47999999999999999998877643
No 375
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=81.38 E-value=4.5 Score=33.67 Aligned_cols=26 Identities=15% Similarity=0.187 Sum_probs=22.5
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
.|+.|+|+|-+|+.++..|.+.. .++
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v 144 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQV 144 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEE
Confidence 58999999999999999999875 554
No 376
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=81.38 E-value=1.7 Score=37.73 Aligned_cols=31 Identities=16% Similarity=0.120 Sum_probs=25.1
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++++|.|||+|.+|..+...|.++ .+++.-+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~ 34 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-GVDVDVY 34 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCCEEEE
Confidence 347999999999999999999887 3665443
No 377
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=81.37 E-value=1.8 Score=34.71 Aligned_cols=29 Identities=17% Similarity=0.314 Sum_probs=24.3
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|.|.|+ |.+|+.+++.|+++. .++..+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g-~~V~~~ 31 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAG-HTVIGI 31 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCC-CEEEEE
Confidence 58999999 999999999999874 565544
No 378
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=81.35 E-value=1.8 Score=37.60 Aligned_cols=30 Identities=20% Similarity=0.393 Sum_probs=24.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|||+|.+|..+...|.++ .+++.-+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~ 55 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQN-GIDVSVY 55 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCCEEEE
Confidence 46999999999999999999887 4665443
No 379
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=81.30 E-value=1.8 Score=34.55 Aligned_cols=32 Identities=16% Similarity=0.062 Sum_probs=26.3
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEEee
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVATY 34 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~ 34 (254)
.+.|+.|+|+|-.|+++++.|.+. .+++.++.
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~-~~~~vgfi 42 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRAC-GETVAAIV 42 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhC-CCEEEEEE
Confidence 356999999988999999999874 57776654
No 380
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=80.93 E-value=1.4 Score=36.31 Aligned_cols=30 Identities=33% Similarity=0.629 Sum_probs=24.8
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.+||.|.|+ |++|+.|++.|.++. .++..+
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~ 42 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKN-VEVIPT 42 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEE
T ss_pred cceEEEECCCChHHHHHHHHHHhCC-CeEEec
Confidence 369999999 999999999999874 565543
No 381
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=80.92 E-value=1.4 Score=37.39 Aligned_cols=28 Identities=25% Similarity=0.363 Sum_probs=23.9
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
|.|||++|.|.+|..+.+.|.+.. +++.
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G-~~v~ 30 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAG-YLLN 30 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT-CEEE
T ss_pred cCEEEEeeehHHHHHHHHHHHhCC-CeEE
Confidence 469999999999999999998874 6653
No 382
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=80.81 E-value=0.63 Score=38.52 Aligned_cols=31 Identities=23% Similarity=0.170 Sum_probs=23.6
Q ss_pred EEEEEccCHHHHHHHHHHHcCCCceeEEeeee
Q 025368 5 KIGINGFGRIGRLVARVILQRDDVELVATYMF 36 (254)
Q Consensus 5 ~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~ 36 (254)
|+.|+|+|-+|+.++..|.+.. ++-..++.+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G-~~~I~v~nR 140 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMG-VKDIWVVNR 140 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT-CCCEEEEES
T ss_pred eEEEECcHHHHHHHHHHHHHcC-CCEEEEEeC
Confidence 7999999999999999998874 522334433
No 383
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=80.78 E-value=1.4 Score=36.88 Aligned_cols=29 Identities=17% Similarity=0.206 Sum_probs=24.3
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|.|+|+|.+|...++.|.+.. .+++.+
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~G-a~VtVi 42 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTG-CKLTLV 42 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGT-CEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCC-CEEEEE
Confidence 69999999999999999999875 555443
No 384
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=80.71 E-value=1.5 Score=38.78 Aligned_cols=28 Identities=25% Similarity=0.398 Sum_probs=23.8
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
+++||+|+|.+|+.+.+.+... .+++.+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~-G~~V~~ 173 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL-GMYVYF 173 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEE
Confidence 5899999999999999999876 467543
No 385
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=80.63 E-value=1.4 Score=37.84 Aligned_cols=28 Identities=21% Similarity=0.200 Sum_probs=23.8
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.||+|+|+|.+|..+...++.+. +++.-
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G-~~V~l 34 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGG-FRVKL 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEE
T ss_pred CeEEEECCcHHHHHHHHHHHhCC-CeEEE
Confidence 48999999999999999988884 66544
No 386
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=80.51 E-value=1.9 Score=37.57 Aligned_cols=32 Identities=25% Similarity=0.323 Sum_probs=25.3
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|++++|+|||+|..|......|.++. .++.-+
T Consensus 1 m~~~~v~iiG~G~~Gl~~A~~l~~~g-~~v~v~ 32 (384)
T 2bi7_A 1 MKSKKILIVGAGFSGAVIGRQLAEKG-HQVHII 32 (384)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHTTT-CEEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCC-CcEEEE
Confidence 76789999999999999999998773 554443
No 387
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=80.45 E-value=1.7 Score=35.98 Aligned_cols=29 Identities=17% Similarity=0.312 Sum_probs=24.0
Q ss_pred EEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 5 KIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
||.|.|+ |++|+.|++.|+++...++..+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~ 30 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVV 30 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEE
Confidence 5889999 9999999999998853566554
No 388
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=80.44 E-value=1.8 Score=37.34 Aligned_cols=32 Identities=16% Similarity=0.074 Sum_probs=24.6
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|++++|.|||+|.+|..+...|.++. +++.-+
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G-~~v~vi 40 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNG-WDVRLH 40 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCC-CCEEEE
Confidence 33479999999999999999998874 665443
No 389
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=80.41 E-value=1.9 Score=35.92 Aligned_cols=28 Identities=25% Similarity=0.436 Sum_probs=24.0
Q ss_pred EEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 5 KIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
||.|.|+ |.+|+.+++.|+++. .++..+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~ 30 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARG-LEVAVL 30 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT-CEEEEE
T ss_pred EEEEEeCCcHHHHHHHHHHHHCC-CEEEEE
Confidence 8999999 999999999999874 566554
No 390
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=80.41 E-value=1.4 Score=36.42 Aligned_cols=27 Identities=26% Similarity=0.319 Sum_probs=23.1
Q ss_pred EEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 5 KIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
||.|.|+ |++|+.|++.|. . ..++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-g~~V~~~ 29 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-VGNLIAL 29 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-TSEEEEE
T ss_pred eEEEECCCCHHHHHHHHHhh-c-CCeEEEe
Confidence 8999999 999999999998 5 4676554
No 391
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=80.33 E-value=7.8 Score=34.93 Aligned_cols=92 Identities=13% Similarity=0.154 Sum_probs=56.0
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCe-----------------eEE-ECC--E
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDK-----------------TLL-FGE--K 63 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~-----------------~l~-~~~--~ 63 (254)
.+|+|-|+|.+|..+++.|.+. ...++++.... +.+..+.|- .+. +.. .
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~----------G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~ 321 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHL-NVKVLTLSDSN----------GYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSS 321 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHT-TCEECEEEETT----------EEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCS
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEEeCC----------ceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcC
Confidence 6999999999999999999887 47777765321 111111110 000 000 0
Q ss_pred EEEEeecCCCCCCCcccCCCcEEEEecCC-ccCHHHHHHHHHCCCCeEEe
Q 025368 64 PVTVFGVRNPEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~Dvv~~a~~~-~~s~~~~~~~~~~G~~~~vi 112 (254)
....+ +.+++ |. .++|+.+-|+-. ..+.+.++.+.+.+|| +|+
T Consensus 322 ~a~~v---~~~~~-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 365 (470)
T 2bma_A 322 TAKYF---PNEKP-WG-VPCTLAFPCATQNDVDLDQAKLLQKNGCI-LVG 365 (470)
T ss_dssp SCEEC---SSCCT-TS-SCCSEEEECSSTTCBCSHHHHHHHHTTCC-EEE
T ss_pred CcEEe---cCcCe-ee-cCccEEEeccccCcCCHHHHHHHHhcCcE-EEE
Confidence 01121 22344 63 589999998754 4678889998888996 444
No 392
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=80.11 E-value=1.4 Score=37.52 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=24.7
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCC----ceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDD----VELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~----~~v~~~ 33 (254)
+||.|.|+ |++|+.|++.|.++.. .++..+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~ 36 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGV 36 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEE
Confidence 58999999 9999999999988752 566554
No 393
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=80.08 E-value=1.6 Score=38.52 Aligned_cols=28 Identities=36% Similarity=0.444 Sum_probs=23.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+++.|.... +++..
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G-~~V~~ 219 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFD-VHLHY 219 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHhCC-CEEEE
Confidence 68999999999999999998763 66543
No 394
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=80.02 E-value=1.6 Score=36.61 Aligned_cols=30 Identities=23% Similarity=0.221 Sum_probs=24.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+.+|.|||+|.+|..+...|.++. +++.-+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G-~~V~vl 31 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAG-HQVHLF 31 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCC-CcEEEE
Confidence 469999999999999999998874 565443
No 395
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=79.96 E-value=2.2 Score=33.05 Aligned_cols=29 Identities=24% Similarity=0.428 Sum_probs=24.0
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+|||.|.|+ |.+|+++++.|. + ..++..+
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~-g~~V~~~ 32 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-K-KAEVITA 32 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-T-TSEEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-C-CCeEEEE
Confidence 458999999 999999999998 6 4665543
No 396
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=79.63 E-value=2.3 Score=36.57 Aligned_cols=26 Identities=35% Similarity=0.432 Sum_probs=22.2
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCC
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDD 27 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~ 27 (254)
..+||+|+|+|.+|..++..|+..+.
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~ 43 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDL 43 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC
Confidence 35799999999999999988887753
No 397
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=79.44 E-value=1.5 Score=36.78 Aligned_cols=27 Identities=19% Similarity=0.300 Sum_probs=22.1
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeE
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~ 31 (254)
.++.|+|+ +.+|+-+.++|.+. +..+.
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~-gAtVt 178 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNR-NYTVS 178 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-TCEEE
T ss_pred CEEEEEcCChHHHHHHHHHHHHC-CCeEE
Confidence 58999999 67999999999887 35543
No 398
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=79.14 E-value=1.1 Score=40.30 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=21.9
Q ss_pred CCCcEEEEEccCHH--HHHHHHHHHcCCCc
Q 025368 1 MGKVKIGINGFGRI--GRLVARVILQRDDV 28 (254)
Q Consensus 1 M~~~~V~IvG~G~~--G~~l~~~L~~~p~~ 28 (254)
|+++||+|+|+|.+ |..|+..|+..+.+
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~ 32 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSIDERM 32 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHCSSC
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhcccc
Confidence 44579999999885 78899888876544
No 399
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=79.12 E-value=1.2 Score=37.97 Aligned_cols=23 Identities=22% Similarity=0.431 Sum_probs=20.8
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCC
Q 025368 4 VKIGINGF-GRIGRLVARVILQRD 26 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p 26 (254)
|||+|+|+ |++|..++..|...+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~ 24 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSP 24 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCT
T ss_pred CEEEEECCCChHHHHHHHHHHhCC
Confidence 39999999 999999999998775
No 400
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=79.11 E-value=4.3 Score=36.40 Aligned_cols=85 Identities=13% Similarity=0.102 Sum_probs=50.3
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEee-cCCCCCCCcccCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG-VRNPEEIPWAETG 82 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 82 (254)
++|.|+|+|.+|...++.|.+.. .++.-+.. .... ... ... ..+ + +.... ..+++++ ++
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~~-~~~~---~~~--~l~-~~~------~--i~~~~~~~~~~~l----~~ 72 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG-ARLTVNAL-TFIP---QFT--VWA-NEG------M--LTLVEGPFDETLL----DS 72 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BEEEEEES-SCCH---HHH--HHH-TTT------S--CEEEESSCCGGGG----TT
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEcC-CCCH---HHH--HHH-hcC------C--EEEEECCCCcccc----CC
Confidence 69999999999999999999884 55443321 1000 000 000 011 1 22211 1222333 57
Q ss_pred CcEEEEecCCc-cCHHHHHHHHHCCCC
Q 025368 83 AEYVVESTGVF-TDKDKAAAHLKGGAK 108 (254)
Q Consensus 83 ~Dvv~~a~~~~-~s~~~~~~~~~~G~~ 108 (254)
+|+||-|++.. ........+.+.|+.
T Consensus 73 ~~lVi~at~~~~~n~~i~~~a~~~~i~ 99 (457)
T 1pjq_A 73 CWLAIAATDDDTVNQRVSDAAESRRIF 99 (457)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHTTCE
T ss_pred ccEEEEcCCCHHHHHHHHHHHHHcCCE
Confidence 99999988876 466667778888883
No 401
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=79.05 E-value=1.9 Score=38.38 Aligned_cols=28 Identities=25% Similarity=0.437 Sum_probs=23.8
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.+... .+++.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~ 184 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL-GMTVRY 184 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEE
Confidence 5899999999999999999877 466544
No 402
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=78.98 E-value=1.7 Score=34.08 Aligned_cols=31 Identities=19% Similarity=0.065 Sum_probs=21.9
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
|+|.|+.|+|+|--|+++++.+.... +++.+
T Consensus 1 ~~m~~~~I~Gagg~gk~v~~~~~~~~-~~v~~ 31 (194)
T 3bfp_A 1 ARTEKIYIYGASGHGLVCEDVAKNMG-YKECI 31 (194)
T ss_dssp CCCSEEEEEC--CHHHHHHHHHHHHT-CSEEE
T ss_pred CCCccEEEEeCCHHHHHHHHHHHhCC-CeEEE
Confidence 45679999999667999999886543 55544
No 403
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=78.93 E-value=1.7 Score=37.00 Aligned_cols=23 Identities=43% Similarity=0.759 Sum_probs=20.5
Q ss_pred cEEEEEccCHHHHHHHHHHHcCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
+||+|+|+|.+|..++..|....
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g 23 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG 23 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 38999999999999999988764
No 404
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=78.82 E-value=1.6 Score=39.44 Aligned_cols=27 Identities=11% Similarity=0.236 Sum_probs=23.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
++||+|+|+|.+|..+.+.|.++. +++
T Consensus 2 ~m~IgvIG~G~mG~~lA~~La~~G-~~V 28 (482)
T 2pgd_A 2 QADIALIGLAVMGQNLILNMNDHG-FVV 28 (482)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT-CCE
T ss_pred CCeEEEEChHHHHHHHHHHHHHCC-CeE
Confidence 368999999999999999999874 564
No 405
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=78.78 E-value=2.4 Score=36.58 Aligned_cols=29 Identities=24% Similarity=0.418 Sum_probs=24.5
Q ss_pred cEEEEEcc-CHHHHHHHHHHH-cCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVIL-QRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~-~~p~~~v~~~ 33 (254)
|+|.|.|+ |++|+.|++.|+ ++. .+|..+
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g-~~V~~~ 33 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN-HSVVIV 33 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-CEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC-CEEEEE
Confidence 59999999 999999999998 764 566554
No 406
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=78.78 E-value=2 Score=40.45 Aligned_cols=30 Identities=17% Similarity=0.239 Sum_probs=25.4
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|.|+ |.+|+.|++.|+++. .+|..+
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G-~~V~~~ 41 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENG-YDCVVA 41 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCc-CEEEEE
Confidence 479999999 999999999999875 566554
No 407
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=78.69 E-value=1.9 Score=38.70 Aligned_cols=31 Identities=26% Similarity=0.374 Sum_probs=25.5
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCC--CceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRD--DVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p--~~~v~~~ 33 (254)
+++|-|.|+ |++|++|++.|++.+ ..++..+
T Consensus 73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l 106 (478)
T 4dqv_A 73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICL 106 (478)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEE
Confidence 579999999 999999999998874 3566554
No 408
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=78.65 E-value=0.96 Score=37.97 Aligned_cols=23 Identities=22% Similarity=0.137 Sum_probs=20.7
Q ss_pred cEEEEEccCHHHHHHHHHHHcCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
.++.|+|+|-+|+.+++.|.+..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G 140 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIV 140 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTC
T ss_pred CEEEEECCcHHHHHHHHHHHHCC
Confidence 58999999999999999998774
No 409
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=78.59 E-value=1.5 Score=37.16 Aligned_cols=24 Identities=29% Similarity=0.412 Sum_probs=20.7
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCC
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDD 27 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~ 27 (254)
+||+|+|+ |.+|..++..|...+.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~ 25 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI 25 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC
Confidence 39999996 9999999998887653
No 410
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=78.57 E-value=1.8 Score=37.78 Aligned_cols=28 Identities=29% Similarity=0.343 Sum_probs=23.2
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCce-eEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVE-LVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~-v~~ 32 (254)
++|||+|+|.+|+.+++.|.... ++ +..
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G-~~~V~~ 193 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFN-PKELLY 193 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC-CSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CcEEEE
Confidence 68999999999999999998763 64 543
No 411
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=78.38 E-value=1.4 Score=39.68 Aligned_cols=30 Identities=23% Similarity=0.399 Sum_probs=24.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.|||-|+|+|.+|..|++.|.++ +.+++-+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~-~~~v~vI 32 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE-NNDITIV 32 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST-TEEEEEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCCEEEE
Confidence 47999999999999999999766 3566554
No 412
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=78.28 E-value=1.4 Score=40.08 Aligned_cols=25 Identities=32% Similarity=0.381 Sum_probs=19.0
Q ss_pred CCCcEEEEEccCHH--HHHHHHHHHcC
Q 025368 1 MGKVKIGINGFGRI--GRLVARVILQR 25 (254)
Q Consensus 1 M~~~~V~IvG~G~~--G~~l~~~L~~~ 25 (254)
|+++||+|+|+|.+ |..|+..|+..
T Consensus 1 m~~~KIaVIGAGsVg~g~ala~~La~~ 27 (480)
T 1obb_A 1 MPSVKIGIIGAGSAVFSLRLVSDLCKT 27 (480)
T ss_dssp -CCCEEEEETTTCHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHhc
Confidence 77789999999885 67777777643
No 413
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=78.20 E-value=2.6 Score=37.33 Aligned_cols=24 Identities=33% Similarity=0.444 Sum_probs=21.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
.++|+|||+|..|..+++.|.++.
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G 29 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEK 29 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT
T ss_pred CCEEEEECccHHHHHHHHHHHhcC
Confidence 469999999999999999999874
No 414
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=78.19 E-value=3 Score=35.38 Aligned_cols=26 Identities=15% Similarity=0.305 Sum_probs=21.5
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCcee
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v 30 (254)
.++.|+|+ |.+|+-+.++|.+. +..+
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~-gAtV 192 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKE-NATV 192 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-TCEE
T ss_pred CEEEEECCCchHHHHHHHHHHHC-CCeE
Confidence 58999999 67899999999887 3554
No 415
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=78.15 E-value=2 Score=39.66 Aligned_cols=33 Identities=24% Similarity=0.202 Sum_probs=26.3
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcC-CCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
|++++|.|||+|..|...+..|.+. +..+++-+
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vi 67 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMV 67 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEE
Confidence 5578999999999999999888865 45666544
No 416
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=78.13 E-value=1.1 Score=38.34 Aligned_cols=81 Identities=12% Similarity=0.270 Sum_probs=46.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGA 83 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (254)
-+|.|+|+|.+|...+.++.... .++..+.... .+. .. -.+-| . ..++ .+.+.+ ..++
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~-----~~~--~~-~~~lG------a--~~v~--~~~~~~---~~~~ 235 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNE-----HKK--QD-ALSMG------V--KHFY--TDPKQC---KEEL 235 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSS-----TTH--HH-HHHTT------C--SEEE--SSGGGC---CSCE
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCH-----HHH--HH-HHhcC------C--Ceec--CCHHHH---hcCC
Confidence 48999999999999999887764 5665543211 110 00 01111 1 1122 223333 2489
Q ss_pred cEEEEecCCccCHHHHHHHHHCC
Q 025368 84 EYVVESTGVFTDKDKAAAHLKGG 106 (254)
Q Consensus 84 Dvv~~a~~~~~s~~~~~~~~~~G 106 (254)
|+||+|++...+.+.+-.++..|
T Consensus 236 D~vid~~g~~~~~~~~~~~l~~~ 258 (348)
T 3two_A 236 DFIISTIPTHYDLKDYLKLLTYN 258 (348)
T ss_dssp EEEEECCCSCCCHHHHHTTEEEE
T ss_pred CEEEECCCcHHHHHHHHHHHhcC
Confidence 99999999875555554444444
No 417
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=77.86 E-value=1.9 Score=37.23 Aligned_cols=28 Identities=21% Similarity=0.298 Sum_probs=23.7
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
++||+|+|+|.+|..+.+.|.+.. .++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G-~~V~ 35 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN-HSVF 35 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEE
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC-CEEE
Confidence 369999999999999999998874 5543
No 418
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=77.63 E-value=1.8 Score=39.15 Aligned_cols=27 Identities=22% Similarity=0.516 Sum_probs=23.1
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
|||+|+|+|.+|..+.+.|.++. +++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G-~~V~ 28 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG-FKVA 28 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEE
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CEEE
Confidence 48999999999999999998874 5643
No 419
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=77.59 E-value=2.4 Score=35.66 Aligned_cols=28 Identities=21% Similarity=0.360 Sum_probs=24.0
Q ss_pred EEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 5 KIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+|.|.|+ |.+|+.+++.|+++. .++..+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~ 30 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNG-HDVIIL 30 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CEEEEE
Confidence 8999999 999999999999874 566554
No 420
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=77.30 E-value=2.2 Score=40.77 Aligned_cols=29 Identities=21% Similarity=0.323 Sum_probs=24.2
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++||+|+|+|.+|..+...+.+.. +++..
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG-~~V~l 340 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSN-YPVIL 340 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTT-CCEEE
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCC-CEEEE
Confidence 468999999999999999998874 66544
No 421
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=77.28 E-value=2.3 Score=37.12 Aligned_cols=30 Identities=23% Similarity=0.197 Sum_probs=24.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCce-eEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVE-LVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~-v~~~ 33 (254)
.++|.|||+|.+|..+...|.++. ++ +.-+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G-~~~v~v~ 34 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAG-IGKVTLL 34 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CSEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC-CCeEEEE
Confidence 479999999999999999998873 55 5443
No 422
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=77.27 E-value=2.5 Score=35.15 Aligned_cols=29 Identities=17% Similarity=0.370 Sum_probs=24.3
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|.|.|+ |++|+.|++.|+++. .++..+
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G-~~V~~~ 31 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENG-YSVNTT 31 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999 999999999998874 566543
No 423
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=77.07 E-value=11 Score=33.77 Aligned_cols=92 Identities=11% Similarity=0.204 Sum_probs=55.5
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCee------E-----EECCE--------E
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKT------L-----LFGEK--------P 64 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~------l-----~~~~~--------~ 64 (254)
.+|+|=|+|.+|..+++.|.+. ...++.+.... +.+..+.|-. + ..++. .
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~-GakvVavsD~~----------G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g 304 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEF-GARVITASDSS----------GTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFG 304 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEEETT----------EEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHT
T ss_pred CEEEEeCCChHHHHHHHHHHhc-CCeEEEEecCC----------ceEEeCCCCCHHHHHHHHHHhcccCCccccccccCC
Confidence 6999999999999999999987 47777654211 1111111100 0 00000 0
Q ss_pred EEEeecCCCCCCCcccCCCcEEEEecCC-ccCHHHHHHHHHCCCCeEEe
Q 025368 65 VTVFGVRNPEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~Dvv~~a~~~-~~s~~~~~~~~~~G~~~~vi 112 (254)
...+ +.+++ |. .+||+.+=|+-. ..+.+.++.+...||+ .|+
T Consensus 305 ~~~~---~~~~i-~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k-~Ia 347 (450)
T 4fcc_A 305 LVYL---EGQQP-WS-VPVDIALPCATQNELDVDAAHQLIANGVK-AVA 347 (450)
T ss_dssp CEEE---ETCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred cEEe---cCccc-cc-CCccEEeeccccccccHHHHHHHHhcCce-EEe
Confidence 1111 23344 54 579999988654 5688889999999996 444
No 424
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=76.97 E-value=2 Score=38.14 Aligned_cols=35 Identities=23% Similarity=0.168 Sum_probs=30.1
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEeeee
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVATYMF 36 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~ 36 (254)
|||.||.|+|.|.+|..+++.+.+. .++++.+++.
T Consensus 4 m~~~kiLI~g~g~~a~~i~~aa~~~-G~~~v~v~~~ 38 (446)
T 3ouz_A 4 MEIKSILIANRGEIALRALRTIKEM-GKKAICVYSE 38 (446)
T ss_dssp TCCCEEEECCCHHHHHHHHHHHHHT-TCEEEEEEEG
T ss_pred cccceEEEECCCHHHHHHHHHHHHc-CCEEEEEEcC
Confidence 7788999999999999999999888 4888777643
No 425
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=76.94 E-value=2.7 Score=37.13 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=25.1
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcC-CCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
|+ +||.|+|+|+.|...++.|.+. ++++|+-+
T Consensus 1 M~-K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI 33 (430)
T 3hyw_A 1 MA-KHVVVIGGGVGGIATAYNLRNLMPDLKITLI 33 (430)
T ss_dssp -C-CEEEEECSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CC-CcEEEECCCHHHHHHHHHHhccCcCCeEEEE
Confidence 55 5999999999999999988764 56776554
No 426
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=76.82 E-value=2 Score=36.26 Aligned_cols=30 Identities=27% Similarity=0.395 Sum_probs=24.5
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|.|+ |++|+.|++.|+++. .++..+
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~ 35 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERG-YTVRAT 35 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC-CEEEEE
Confidence 468999999 999999999999874 566543
No 427
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=76.81 E-value=2.1 Score=37.99 Aligned_cols=30 Identities=33% Similarity=0.712 Sum_probs=25.4
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEee
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATY 34 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~ 34 (254)
++|.|+|+|++|+.+++.|.++. ++++.+-
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g-~~vvvId 34 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG-VKMVVLD 34 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCC-CCEEEEE
Confidence 58999999999999999999874 6766653
No 428
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=76.76 E-value=3 Score=33.50 Aligned_cols=31 Identities=19% Similarity=0.294 Sum_probs=24.9
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEE
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~ 32 (254)
|+++++-|.|+ |-+|+++++.|+++. ..+..
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G-~~V~~ 32 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERG-HQVSM 32 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTT-CEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEE
Confidence 77788999999 999999999999885 56544
No 429
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=76.64 E-value=2.1 Score=35.45 Aligned_cols=31 Identities=19% Similarity=0.262 Sum_probs=25.4
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+.+|.|||+|.+|..+...|.+++.+++.-+
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~vi 69 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAII 69 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEE
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEE
Confidence 3589999999999999999998655665544
No 430
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=76.62 E-value=2.1 Score=39.04 Aligned_cols=28 Identities=11% Similarity=0.252 Sum_probs=24.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
..||||+|+|.+|..+.+.|.++. ++|.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G-~~V~ 37 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHG-FTVC 37 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEE
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCC-CEEE
Confidence 479999999999999999999884 6653
No 431
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=76.53 E-value=2.3 Score=34.45 Aligned_cols=27 Identities=22% Similarity=0.450 Sum_probs=22.4
Q ss_pred EEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 5 KIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
||.|.|+ |++|+.+++.|.+ ..++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~--g~~V~~~ 29 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE--RHEVIKV 29 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT--TSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHhc--CCeEEEe
Confidence 8999999 9999999999984 3565544
No 432
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=76.34 E-value=1.8 Score=36.93 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=26.0
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|.++-|.|||+|.+|..+...|.++. +++.-+
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G-~~V~v~ 33 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYG-LKTLMI 33 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC-CcEEEE
Confidence 55577999999999999999999884 665443
No 433
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=76.17 E-value=2.3 Score=37.76 Aligned_cols=33 Identities=21% Similarity=0.196 Sum_probs=26.4
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcC-CCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
|++.+|.|||+|.+|......|.++ |+.++.-+
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~ 35 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLL 35 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEE
Confidence 7778999999999999999988875 33555443
No 434
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=76.10 E-value=2.6 Score=35.55 Aligned_cols=27 Identities=33% Similarity=0.408 Sum_probs=23.2
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
+||+|+|+|.+|..+.+.|+ . .+++..
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-G~~V~v 39 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-KHEVVL 39 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEE
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-CCEEEE
Confidence 69999999999999999999 6 477544
No 435
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=75.96 E-value=2.8 Score=35.47 Aligned_cols=29 Identities=24% Similarity=0.358 Sum_probs=23.2
Q ss_pred cEEEEEccCHHHHHHHHHHHcC--CCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQR--DDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~--p~~~v~~ 32 (254)
.+|.|||+|.+|..+...|.+. ..+++.-
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v 32 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAV 32 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEE
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEE
Confidence 6999999999999999999881 2455443
No 436
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=75.90 E-value=4.2 Score=34.21 Aligned_cols=26 Identities=15% Similarity=0.317 Sum_probs=21.6
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCcee
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v 30 (254)
.++.|+|+ |.+|+-+.++|.+. +..+
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~-gAtV 188 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNA-KATV 188 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-TCEE
T ss_pred CEEEEECCCchhHHHHHHHHHHC-CCeE
Confidence 58999999 66899999999887 3554
No 437
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=75.74 E-value=3 Score=35.35 Aligned_cols=23 Identities=30% Similarity=0.463 Sum_probs=20.8
Q ss_pred cEEEEEccCHHHHHHHHHHHcCC
Q 025368 4 VKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
+||+|+|+|++|..++-.|..++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~ 23 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLG 23 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 49999999999999999888775
No 438
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=75.73 E-value=2.7 Score=35.23 Aligned_cols=29 Identities=17% Similarity=0.185 Sum_probs=23.0
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
+++|.|||+|..|...+..|.+. .+++.-
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~l 33 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR-GLSFRF 33 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCCEEE
Confidence 36899999999999999988765 355433
No 439
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=75.73 E-value=1.9 Score=37.05 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=26.0
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|++.+|.|||+|.+|..+...|.++. +++.-+
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G-~~V~l~ 33 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYG-LKTLMI 33 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCC-CCEEEE
Confidence 55679999999999999999998874 565443
No 440
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=75.46 E-value=3.7 Score=32.70 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=24.9
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.++|-|.|+ |.+|+++++.|.++. .++..+
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G-~~V~~~ 37 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASG-AKVVAV 37 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEE
Confidence 468999999 999999999999885 565443
No 441
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=75.41 E-value=2.8 Score=34.66 Aligned_cols=29 Identities=17% Similarity=0.100 Sum_probs=23.7
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
+++|.|||+|..|...+..|.++. +++.-
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g-~~v~l 43 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYM-LKTLV 43 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT-CCEEE
T ss_pred ccCEEEECccHHHHHHHHHHHHCC-CcEEE
Confidence 469999999999999999998873 55433
No 442
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=75.30 E-value=3.1 Score=38.08 Aligned_cols=28 Identities=43% Similarity=0.653 Sum_probs=23.7
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
++|||+|+|.+|+.+.+.|... .+++..
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~-G~~V~~ 170 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAF-GAYVVA 170 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEE
Confidence 6999999999999999999877 366543
No 443
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=75.11 E-value=3.5 Score=34.98 Aligned_cols=24 Identities=29% Similarity=0.448 Sum_probs=21.2
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCC
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDD 27 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~ 27 (254)
+||+|+|+ |.+|..++..|...+.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~ 25 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF 25 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC
Confidence 39999999 9999999999987753
No 444
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=75.06 E-value=3.9 Score=32.64 Aligned_cols=29 Identities=21% Similarity=0.306 Sum_probs=24.1
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.+|-|.|+ |.+|+++++.|.++. .++..+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G-~~V~~~ 37 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATG-ARVVAV 37 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999 999999999999875 565443
No 445
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=75.01 E-value=2.4 Score=37.51 Aligned_cols=29 Identities=31% Similarity=0.469 Sum_probs=24.6
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.+|.|||+|.+|..+...|.++. +++.-+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G-~~V~vi 51 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHD-VDVTVY 51 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHCC-CeEEEE
Confidence 68999999999999999999884 665544
No 446
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=74.85 E-value=3.2 Score=36.04 Aligned_cols=29 Identities=21% Similarity=0.141 Sum_probs=24.4
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.++|.|||+|.+|..+...|.++. +++.-
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G-~~V~v 51 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSG-IDCDV 51 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CCEEE
Confidence 479999999999999999999884 66543
No 447
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=74.78 E-value=2.9 Score=37.85 Aligned_cols=32 Identities=16% Similarity=0.194 Sum_probs=21.2
Q ss_pred CcEEEEEccCHH-HHHHHHHHHcC-CCceeEEee
Q 025368 3 KVKIGINGFGRI-GRLVARVILQR-DDVELVATY 34 (254)
Q Consensus 3 ~~~V~IvG~G~~-G~~l~~~L~~~-p~~~v~~~~ 34 (254)
++||+|+|+|.+ |..|+..|+.. +.+....+.
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~ 61 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLK 61 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEE
Confidence 359999999777 66677666665 345333333
No 448
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=74.78 E-value=3.3 Score=33.06 Aligned_cols=32 Identities=16% Similarity=0.263 Sum_probs=25.7
Q ss_pred CCCcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|+.+++-|.|+ |.+|+++++.|.++. .++..+
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G-~~V~~~ 33 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNG-YTVLNI 33 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTT-EEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEE
Confidence 66678999999 999999999999884 565443
No 449
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=74.36 E-value=2.9 Score=35.46 Aligned_cols=34 Identities=12% Similarity=-0.002 Sum_probs=25.5
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeee
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMF 36 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~ 36 (254)
.++|+|+|+|.+|+.+++.|.+...++-+.++.+
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 3699999999999999999887633544455443
No 450
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=74.30 E-value=3.3 Score=37.12 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=25.0
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
..|++|+|.||+|..+...|++.. +++...
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G-~~V~~~ 37 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG-HEVVCV 37 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC-CEEEEE
Confidence 469999999999999999999873 666553
No 451
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=73.93 E-value=1.7 Score=36.22 Aligned_cols=28 Identities=21% Similarity=0.181 Sum_probs=23.0
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
++++|.|||+|..|...+..|.++. +++
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g-~~v 31 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARAN-LQP 31 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTT-CCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCC-CcE
Confidence 3468999999999999999998763 444
No 452
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=73.72 E-value=3.4 Score=36.72 Aligned_cols=29 Identities=28% Similarity=0.571 Sum_probs=25.1
Q ss_pred cEEEEEccCHHHHHHHHHHHc-CCCceeEEe
Q 025368 4 VKIGINGFGRIGRLVARVILQ-RDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~-~p~~~v~~~ 33 (254)
.+|+|+|+|.+|+.+++.|.. . .+++.++
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~-G~kVv~~ 242 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDF-GMKVVAV 242 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CEEEEEcCCHHHHHHHHHHHHhc-CCEEEEE
Confidence 689999999999999999988 6 5777665
No 453
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=73.63 E-value=2.4 Score=35.30 Aligned_cols=30 Identities=23% Similarity=0.127 Sum_probs=24.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+.+|.|||+|..|...+..|.++ .+++.-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~li 36 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKII 36 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEE
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEE
Confidence 36899999999999999998876 4665443
No 454
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=73.46 E-value=3.4 Score=36.55 Aligned_cols=24 Identities=13% Similarity=0.033 Sum_probs=21.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
|++|+|||+|.+|......|.+..
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G 25 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAP 25 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSS
T ss_pred CceEEEECCcHHHHHHHHHHHhCC
Confidence 479999999999999999999875
No 455
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=73.33 E-value=3.3 Score=36.37 Aligned_cols=32 Identities=19% Similarity=0.390 Sum_probs=26.8
Q ss_pred CCcEEEEEccCHHHHHHHHHHHcCCCceeEEee
Q 025368 2 GKVKIGINGFGRIGRLVARVILQRDDVELVATY 34 (254)
Q Consensus 2 ~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~ 34 (254)
++.||+|+|.|..|+.+++.+.+. .+++..+.
T Consensus 23 ~~~~I~ilGgG~lg~~l~~aa~~l-G~~v~~~d 54 (403)
T 3k5i_A 23 NSRKVGVLGGGQLGRMLVESANRL-NIQVNVLD 54 (403)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEE
Confidence 457999999999999999999887 47776654
No 456
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=72.91 E-value=2.3 Score=35.65 Aligned_cols=27 Identities=15% Similarity=0.210 Sum_probs=22.4
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELV 31 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~ 31 (254)
++|.|||+|..|..++..|.++. +++.
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g-~~v~ 35 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAE-LKPL 35 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT-CCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCC-CeEE
Confidence 58999999999999999998763 4443
No 457
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=72.47 E-value=2.9 Score=37.64 Aligned_cols=30 Identities=27% Similarity=0.370 Sum_probs=23.8
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC--CCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQR--DDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~--p~~~v~~ 32 (254)
+++|.|||+|..|...+..|.+. ++.++.-
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~l 66 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVV 66 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEE
Confidence 37999999999999999988865 3455544
No 458
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=72.20 E-value=3.1 Score=34.62 Aligned_cols=30 Identities=17% Similarity=0.218 Sum_probs=24.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|.|||+|..|...+..|.++. +++.-+
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g-~~v~vi 51 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAE-IKPILY 51 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT-CCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC-CCEEEE
Confidence 479999999999999999998873 564433
No 459
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=72.15 E-value=2.9 Score=36.94 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=25.6
Q ss_pred CC-CcEEEEEccCHHHHHHHHHHHc--CCCceeEEe
Q 025368 1 MG-KVKIGINGFGRIGRLVARVILQ--RDDVELVAT 33 (254)
Q Consensus 1 M~-~~~V~IvG~G~~G~~l~~~L~~--~p~~~v~~~ 33 (254)
|+ |.+|.|||+|+.|.+.+..|.+ .++.+++-+
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtli 36 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLI 36 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEE
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEE
Confidence 54 5799999999999999998887 245665544
No 460
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=71.94 E-value=3.5 Score=36.29 Aligned_cols=31 Identities=16% Similarity=0.095 Sum_probs=24.7
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC-CCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
+.+|.|||+|+.|...+..|.+. ++.+++-+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtli 33 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLI 33 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEE
Confidence 47999999999999999988873 35666554
No 461
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=71.93 E-value=14 Score=32.90 Aligned_cols=28 Identities=4% Similarity=-0.045 Sum_probs=23.0
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+|.|+|+|++|.+++..|.+.. .++.-
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g-~~V~l 225 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYG-AKKLI 225 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTT-CSEEE
T ss_pred CEEEEEcCCCCHHHHHHHHHHhC-CeEEE
Confidence 58999999999999999998773 34433
No 462
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=71.83 E-value=4.3 Score=37.72 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=25.6
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
|+..+|.|||+|.+|..++..|.++. +++.-+
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G-~~V~Li 52 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLG-HDVTIY 52 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCC-CCEEEE
Confidence 34479999999999999999998874 665443
No 463
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=71.75 E-value=4.6 Score=34.99 Aligned_cols=30 Identities=27% Similarity=0.461 Sum_probs=25.7
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+++|+|+|.|..|+.+++.+.+.. +++..+
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG-~~viv~ 41 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMG-YKVVVL 41 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 469999999999999999998884 777665
No 464
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=71.51 E-value=4 Score=34.63 Aligned_cols=29 Identities=17% Similarity=0.066 Sum_probs=23.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
+++|.|||+|..|..++..|.+. .+++.-
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~l 42 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMN-NISCRI 42 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEE
Confidence 46899999999999999988865 355433
No 465
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=71.16 E-value=21 Score=32.01 Aligned_cols=93 Identities=16% Similarity=0.250 Sum_probs=56.1
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEeeeeeeccccccccccceeecCCe------------------eEE-ECCE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDK------------------TLL-FGEK 63 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~------------------~l~-~~~~ 63 (254)
-.+|+|-|+|.+|..+++.|.+. ...++++.... | .+..+.|- .+. +...
T Consensus 230 g~~v~VqG~GnVG~~~a~~L~~~-GakvVavsD~~-----G-----~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~ 298 (449)
T 1bgv_A 230 GKTVALAGFGNVAWGAAKKLAEL-GAKAVTLSGPD-----G-----YIYDPEGITTEEKINYMLEMRASGRNKVQDYADK 298 (449)
T ss_dssp TCEEEECCSSHHHHHHHHHHHHH-TCEEEEEEETT-----E-----EEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEeCC-----c-----eEECCCcCCCHHHHHHHHHHHhccCCChhhcccc
Confidence 36999999999999999999877 47887765321 1 11111110 000 0000
Q ss_pred -EEEEeecCCCCCCCcccCCCcEEEEecCC-ccCHHHHHHHHHCCCCeEEe
Q 025368 64 -PVTVFGVRNPEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVII 112 (254)
Q Consensus 64 -~~~~~~~~~~~~~~~~~~~~Dvv~~a~~~-~~s~~~~~~~~~~G~~~~vi 112 (254)
..+.+. .+++ |. .++|+.+-|+-. ..+.+.++.+...||| +|+
T Consensus 299 ~~a~~i~---~~e~-~~-~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~ 343 (449)
T 1bgv_A 299 FGVQFFP---GEKP-WG-QKVDIIMPCATQNDVDLEQAKKIVANNVK-YYI 343 (449)
T ss_dssp HTCEEEE---TCCG-GG-SCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred cCCEEeC---chhh-hc-CCcceeeccccccccchhhHHHHHhcCCe-EEE
Confidence 011211 2334 63 579999988754 4688889998889996 444
No 466
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=71.08 E-value=3.5 Score=36.58 Aligned_cols=32 Identities=25% Similarity=0.197 Sum_probs=24.5
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcC-CCceeEEe
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
|+ ++|.|||+|..|...+..|.++ |..++.-+
T Consensus 1 M~-~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vi 33 (452)
T 3oc4_A 1 MS-LKIVIIGASFAGISAAIASRKKYPQAEISLI 33 (452)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CC-CCEEEECCCHHHHHHHHHHHhhCcCCcEEEE
Confidence 54 6999999999999999988865 45666544
No 467
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=71.06 E-value=5.5 Score=36.05 Aligned_cols=83 Identities=20% Similarity=0.236 Sum_probs=48.3
Q ss_pred cEEEEEccCHHHHH-HHHHHHcCCCceeEEeeeeeeccccccccccceeecCCeeEEECCEEEEEeecCCCCCCCcccCC
Q 025368 4 VKIGINGFGRIGRL-VARVILQRDDVELVATYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETG 82 (254)
Q Consensus 4 ~~V~IvG~G~~G~~-l~~~L~~~p~~~v~~~~~~~~~s~~g~~~~~~v~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
.||.|+|.|-+|.. ++++|.++. .+|... |....... . .|.-.| +.++...+++.+ .+
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G-~~V~~~-----D~~~~~~~-~--------~l~~~g--i~~~~g~~~~~~----~~ 81 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG-YQISGS-----DLAPNSVT-Q--------HLTALG--AQIYFHHRPENV----LD 81 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT-CEEEEE-----CSSCCHHH-H--------HHHHTT--CEEESSCCGGGG----TT
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC-CeEEEE-----ECCCCHHH-H--------HHHHCC--CEEECCCCHHHc----CC
Confidence 68999999888986 899999884 665542 21100000 0 111012 233322334433 56
Q ss_pred CcEEEEecCCccCHHHHHHHHHCCC
Q 025368 83 AEYVVESTGVFTDKDKAAAHLKGGA 107 (254)
Q Consensus 83 ~Dvv~~a~~~~~s~~~~~~~~~~G~ 107 (254)
+|+|+-+.+-..+...+.++.++|+
T Consensus 82 ~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 82 ASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CCEEEECCCCCCCCHHHHHHHHCCC
Confidence 8999976554444455667788888
No 468
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=71.04 E-value=4.4 Score=32.77 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=25.5
Q ss_pred CCcEEEEEcc-CHHHHHHHHHHHcCCC--ceeEEe
Q 025368 2 GKVKIGINGF-GRIGRLVARVILQRDD--VELVAT 33 (254)
Q Consensus 2 ~~~~V~IvG~-G~~G~~l~~~L~~~p~--~~v~~~ 33 (254)
++++|-|.|+ |.+|+++++.|+++.. ..+..+
T Consensus 20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~ 54 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTT 54 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEE
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEE
Confidence 3568999999 9999999999998852 555443
No 469
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=70.99 E-value=2.9 Score=39.90 Aligned_cols=29 Identities=14% Similarity=0.182 Sum_probs=24.0
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+||+|+|+|++|..+...+.+.. +++..
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG-~~V~l 342 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKG-TPILM 342 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTT-CCEEE
T ss_pred CCEEEEECCChhhHHHHHHHHhCC-CEEEE
Confidence 468999999999999999998874 56543
No 470
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=70.76 E-value=5.1 Score=32.24 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=24.8
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.++|-|.|+ |.+|+++++.|.++. .++..+
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~G-~~V~~~ 44 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAAG-ANVAVI 44 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTT-EEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-CeEEEE
Confidence 368999999 999999999999885 565444
No 471
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=70.46 E-value=2.8 Score=37.53 Aligned_cols=24 Identities=29% Similarity=0.307 Sum_probs=21.2
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHc
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQ 24 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~ 24 (254)
|.+++|.|||+|+.|...+..|.+
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~ 24 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLK 24 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHh
Confidence 777899999999999999998877
No 472
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=69.90 E-value=2.3 Score=35.33 Aligned_cols=29 Identities=21% Similarity=0.413 Sum_probs=23.2
Q ss_pred EEEEEcc-CHHHHHHHHHHHcC-CCceeEEe
Q 025368 5 KIGINGF-GRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 5 ~V~IvG~-G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
||.|.|+ |++|+.|++.|.++ +..++..+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~ 31 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIAS 31 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 5889999 99999999999876 34565554
No 473
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=69.71 E-value=6.4 Score=31.45 Aligned_cols=29 Identities=17% Similarity=0.273 Sum_probs=24.3
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.+|-|.|+ |.+|+++++.|.++. .++..+
T Consensus 12 k~vlITGasggiG~~la~~l~~~G-~~V~~~ 41 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASG-ARLILI 41 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEE
Confidence 57999999 999999999999884 565544
No 474
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=69.67 E-value=4.4 Score=32.42 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=24.8
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.++|-|.|+ |.+|+++++.|+++. .++..+
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G-~~V~~~ 41 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAG-ASVVVS 41 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTT-CEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-CEEEEE
Confidence 368999999 999999999999885 565543
No 475
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=69.55 E-value=4.8 Score=31.86 Aligned_cols=29 Identities=21% Similarity=0.223 Sum_probs=24.3
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|.|.|+ |.+|+++++.|.++. .++..+
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G-~~V~~~ 32 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARG-YRVVVL 32 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT-CEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-CEEEEE
Confidence 68999999 999999999999874 565443
No 476
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=69.36 E-value=5.1 Score=36.45 Aligned_cols=28 Identities=14% Similarity=0.247 Sum_probs=23.8
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+|+|+|+|.+|+.+++.|.... +++..
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G-~~V~v 305 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLG-ATVWV 305 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEE
Confidence 68999999999999999998774 66544
No 477
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=69.12 E-value=6.2 Score=31.74 Aligned_cols=30 Identities=20% Similarity=0.221 Sum_probs=24.7
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
..+|-|.|+ |.+|+++++.|.++. .++..+
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G-~~V~~~ 37 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEG-ATVAAC 37 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-CEEEEE
Confidence 368999999 999999999999885 565443
No 478
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=69.09 E-value=4.6 Score=36.10 Aligned_cols=23 Identities=30% Similarity=0.387 Sum_probs=19.7
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHc
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQ 24 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~ 24 (254)
|. ++|+|||+|..|...++.|.+
T Consensus 1 M~-~~V~IIGaG~aGl~aA~~L~~ 23 (464)
T 2xve_A 1 MA-TRIAILGAGPSGMAQLRAFQS 23 (464)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHH
T ss_pred CC-CcEEEECccHHHHHHHHHHHh
Confidence 53 699999999999999999887
No 479
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=69.00 E-value=4.3 Score=34.66 Aligned_cols=29 Identities=28% Similarity=0.370 Sum_probs=23.7
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
+.+|.|||+|.+|..++..|.++. .++.-
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G-~~V~l 33 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRG-EEVTV 33 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTT-CCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC-CeEEE
Confidence 368999999999999999998873 55433
No 480
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=68.98 E-value=4.8 Score=35.97 Aligned_cols=28 Identities=18% Similarity=0.324 Sum_probs=23.7
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+|+|+|+|.+|+.+++.|.... +++..
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~G-a~Viv 239 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFG-ARVVV 239 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEE
Confidence 69999999999999999998774 66443
No 481
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=68.92 E-value=6.3 Score=31.61 Aligned_cols=29 Identities=10% Similarity=0.123 Sum_probs=24.4
Q ss_pred cEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|-|.|+ |.+|+++++.|+++. .++..+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G-~~V~~~ 43 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAG-ARVIIA 43 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-CEEEEE
Confidence 57999999 999999999999885 565543
No 482
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=68.75 E-value=4.6 Score=34.38 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=27.0
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEeeeee
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVATYMFK 37 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~~~~~ 37 (254)
.+++|+|+|.+|+..++.|.+...++.+.++.+.
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~ 159 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR 159 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC
Confidence 6999999999999999998874446666666553
No 483
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=68.58 E-value=6.1 Score=33.54 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=24.4
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
+.+|.|||+|.+|..++..|.++ ..++.-+
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vl 35 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK-GYSVHIL 35 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCEEEEE
Confidence 46899999999999999999877 3665444
No 484
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=68.55 E-value=6 Score=34.32 Aligned_cols=29 Identities=28% Similarity=0.432 Sum_probs=25.2
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.+|+|+|.|.+|+.+++.+.+. .+++..+
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~-G~~vi~~ 43 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM-GYKIAVL 43 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEE
Confidence 5899999999999999999877 4777665
No 485
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=68.39 E-value=4.5 Score=34.81 Aligned_cols=30 Identities=23% Similarity=0.174 Sum_probs=24.2
Q ss_pred cEEEEEccCHHHHHHHHHHHcC-CCceeEEe
Q 025368 4 VKIGINGFGRIGRLVARVILQR-DDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~-p~~~v~~~ 33 (254)
++|.|||+|.+|..+...|.++ |.+++.-+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~ 31 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIV 31 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEE
Confidence 3899999999999999998875 45765443
No 486
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=68.37 E-value=4.4 Score=35.21 Aligned_cols=30 Identities=10% Similarity=-0.044 Sum_probs=23.5
Q ss_pred cEEEEEccCHHHHHHHHHHHcC--CCceeEEe
Q 025368 4 VKIGINGFGRIGRLVARVILQR--DDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~--p~~~v~~~ 33 (254)
++|.|||+|.+|.+.+..|.+. +..++.-+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vi 33 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVI 33 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEE
Confidence 6999999999999999988871 34555443
No 487
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=68.31 E-value=4.3 Score=37.22 Aligned_cols=30 Identities=17% Similarity=0.083 Sum_probs=23.4
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
++|.|||+|..|..++..|.++..+++.-+
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~vi 38 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGF 38 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEE
Confidence 689999999999999999982334555443
No 488
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=68.10 E-value=4.1 Score=35.70 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=22.6
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCc
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDV 28 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~ 28 (254)
.+||+|+|| |.+|..++-.|...+-+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~ 58 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVF 58 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcC
Confidence 479999997 99999999999887644
No 489
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=68.09 E-value=4.9 Score=33.96 Aligned_cols=24 Identities=25% Similarity=0.283 Sum_probs=20.6
Q ss_pred CcEEEEEccCHHHHHHHHHHHcCC
Q 025368 3 KVKIGINGFGRIGRLVARVILQRD 26 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~p 26 (254)
++||+|+|+|.+|..+...|+...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g 37 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKG 37 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhcC
Confidence 469999999999999988887664
No 490
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=67.89 E-value=5 Score=34.79 Aligned_cols=29 Identities=17% Similarity=0.306 Sum_probs=24.0
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEEe
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.+|.|||+|.+|..+...|.++. +++.-+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G-~~V~v~ 34 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSG-FKVKIV 34 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCC-CCEEEE
Confidence 68999999999999999998874 665443
No 491
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=67.65 E-value=2.3 Score=36.60 Aligned_cols=24 Identities=17% Similarity=0.253 Sum_probs=21.1
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCC
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRD 26 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p 26 (254)
.+||+|+|+ |.+|..++..|...+
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~ 27 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGS 27 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCC
Confidence 479999997 999999999998664
No 492
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=67.57 E-value=5.4 Score=35.88 Aligned_cols=28 Identities=14% Similarity=0.270 Sum_probs=23.5
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
.+|+|+|+|.+|+.+++.+.... .++..
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG-a~Viv 275 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG-ARVKV 275 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEE
Confidence 58999999999999999998773 66543
No 493
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=67.51 E-value=5 Score=32.84 Aligned_cols=25 Identities=28% Similarity=0.337 Sum_probs=21.8
Q ss_pred EEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 5 KIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 5 ~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
||+|+|+|.+|+.+++.|.+.. +++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~v 142 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LEV 142 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCE
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CEE
Confidence 7999999999999999998875 443
No 494
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=67.28 E-value=7.2 Score=31.39 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=24.8
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.++|-|.|+ |.+|+++++.|.++. .++..+
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G-~~V~~~ 42 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQG-ASAVLL 42 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-CEEEEE
Confidence 368999999 999999999999885 565443
No 495
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=67.09 E-value=5.2 Score=33.10 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=22.5
Q ss_pred cEEEEEccCHHHHHHHHHHHcCCCcee
Q 025368 4 VKIGINGFGRIGRLVARVILQRDDVEL 30 (254)
Q Consensus 4 ~~V~IvG~G~~G~~l~~~L~~~p~~~v 30 (254)
+||+|+|+|.+|+.+++.|.+.. +++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g-~~V 155 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG-AKV 155 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEE
T ss_pred CEEEEECchHHHHHHHHHHHHcC-CEE
Confidence 68999999999999999998875 444
No 496
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=67.02 E-value=7.2 Score=31.65 Aligned_cols=30 Identities=23% Similarity=0.321 Sum_probs=24.8
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.++|-|.|+ |.+|+++++.|.++. .++..+
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G-~~V~~~ 46 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYG-AKVVIA 46 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEE
Confidence 368999999 999999999999885 565544
No 497
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=66.90 E-value=5.4 Score=32.28 Aligned_cols=30 Identities=23% Similarity=0.173 Sum_probs=24.8
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.++|-|.|+ |.+|+++++.|.++. .++..+
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G-~~v~~~ 51 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRG-ASVVVN 51 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEE
Confidence 368999999 999999999999885 565443
No 498
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=66.88 E-value=6.2 Score=35.85 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=24.3
Q ss_pred CcEEEEEccCHHHHHHHHHHHcC--CCceeEEe
Q 025368 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~G~~G~~l~~~L~~~--p~~~v~~~ 33 (254)
+.+|.|||+|.+|..+...|.++ ..+++.-+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~li 37 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLI 37 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEE
Confidence 46999999999999999998872 24665444
No 499
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=66.67 E-value=5 Score=32.12 Aligned_cols=30 Identities=20% Similarity=0.225 Sum_probs=24.6
Q ss_pred CcEEEEEcc-CHHHHHHHHHHHcCCCceeEEe
Q 025368 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAT 33 (254)
Q Consensus 3 ~~~V~IvG~-G~~G~~l~~~L~~~p~~~v~~~ 33 (254)
.++|-|.|+ |.+|+.+++.|.++. .++..+
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G-~~V~~~ 37 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAG-AKVGLH 37 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-CEEEEE
Confidence 368999999 999999999999884 565443
No 500
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=66.64 E-value=4.7 Score=35.84 Aligned_cols=31 Identities=19% Similarity=0.130 Sum_probs=25.3
Q ss_pred CCCcEEEEEccCHHHHHHHHHHHcCCCceeEE
Q 025368 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVA 32 (254)
Q Consensus 1 M~~~~V~IvG~G~~G~~l~~~L~~~p~~~v~~ 32 (254)
|++++|.|||+|..|...+..|.++ .+++.-
T Consensus 1 M~~~dvvIIGaG~aGl~aA~~l~~~-G~~V~l 31 (464)
T 2a8x_A 1 MTHYDVVVLGAGPGGYVAAIRAAQL-GLSTAI 31 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT-TCCEEE
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCeEEE
Confidence 6567999999999999999998877 355543
Done!