Query 025372
Match_columns 254
No_of_seqs 123 out of 221
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 05:08:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025372.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025372hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04080 Per1: Per1-like ; In 100.0 2.6E-98 6E-103 681.2 22.5 233 1-243 23-267 (267)
2 KOG2970 Predicted membrane pro 100.0 1.9E-94 4.1E-99 657.0 18.7 243 1-251 73-319 (319)
3 COG5237 PER1 Predicted membran 100.0 8.4E-76 1.8E-80 525.2 15.0 233 5-247 74-315 (319)
4 PF03006 HlyIII: Haemolysin-II 97.7 0.0019 4.2E-08 55.9 14.3 153 78-232 45-219 (222)
5 PF05875 Ceramidase: Ceramidas 97.5 0.012 2.5E-07 53.4 17.7 186 30-240 24-236 (262)
6 PF12036 DUF3522: Protein of u 97.0 0.014 3E-07 51.0 12.2 93 81-181 34-138 (186)
7 TIGR01065 hlyIII channel prote 96.5 0.18 3.8E-06 44.4 15.4 151 77-236 39-198 (204)
8 PRK15087 hemolysin; Provisiona 96.0 0.43 9.4E-06 42.6 15.5 151 77-237 54-211 (219)
9 KOG0748 Predicted membrane pro 86.4 29 0.00062 32.5 18.7 155 91-248 98-276 (286)
10 COG1272 Predicted membrane pro 61.4 1.3E+02 0.0028 27.4 12.8 41 78-118 59-104 (226)
11 PF10277 Frag1: Frag1/DRAM/Sfk 60.8 1E+02 0.0022 26.0 13.5 90 22-118 41-132 (215)
12 PF13965 SID-1_RNA_chan: dsRNA 59.5 66 0.0014 33.1 9.5 32 214-245 528-562 (570)
13 PF10709 DUF2511: Protein of u 33.0 17 0.00036 28.5 0.3 14 16-29 5-18 (87)
14 KOG3402 Predicted membrane pro 29.9 1.9E+02 0.0042 23.0 5.8 43 81-123 29-71 (101)
15 PF15174 PRNT: Prion-related p 23.8 32 0.00068 24.1 0.4 9 218-226 26-34 (51)
16 COG2717 Predicted membrane pro 21.8 4.4E+02 0.0096 23.8 7.4 99 83-183 21-133 (209)
17 PF07695 7TMR-DISM_7TM: 7TM di 20.7 4.7E+02 0.01 21.3 8.3 30 100-130 63-92 (205)
No 1
>PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum [].
Probab=100.00 E-value=2.6e-98 Score=681.18 Aligned_cols=233 Identities=45% Similarity=0.797 Sum_probs=213.0
Q ss_pred CchhhHHHHHcCCCCcccccccccccccccccHHHHHHHHhhHHHHHhhhHHHHHHHHhhCCCCCCCccchhhhhHHHHH
Q 025372 1 MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIY 80 (254)
Q Consensus 1 ~~~~~~~R~~~g~~v~QFhGKWPF~Rv~GiQEp~SvlFSllNl~~h~~g~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 80 (254)
|...|++|+++|+|++||||||||+|++|||||+||+||++|+++|++|+++++ ++.|.+.+.+++ |+++
T Consensus 23 m~~~t~~r~~~g~~i~QfhGKWPF~Rv~GiQEp~Sv~FSllNl~~h~~~~~~~~----~~~~~~~p~~~~------~~~~ 92 (267)
T PF04080_consen 23 MWIITEERIKNGEPIVQFHGKWPFKRVLGIQEPASVLFSLLNLLAHYRGLRKFR----RQVPRNSPMYPY------YIIY 92 (267)
T ss_pred cHHHHHHHHHcCCCcccccccccchhhhcCchHHHHHHHHHhHHHHHHHHHHHH----HhccCCCCCcCe------eehH
Confidence 668899999999999999999999999999999999999999999999998854 344444333333 5679
Q ss_pred HHHHHHHHHHHHHhhccCCCcchhhhHHhhHHHHHHHHHHHHHHhccCC-hhHHHHHHHHHHHHHHHHHhhhcccccccc
Q 025372 81 GILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVR-DEAARVMVAAPLIAFVTTHILYLNFYKLDH 159 (254)
Q Consensus 81 ~~v~~~aW~wStiFH~RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~-~~~~r~~~~~~~~~~~~~Hv~yL~~~~fdY 159 (254)
+++|||||+||||||+||+++|||||||||+++|++|++++++|+++++ ++..+.+++++|+++|++||+||++.||||
T Consensus 93 ~~v~~naW~wStvFH~RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~~~~~~~~~~~~~~~~Hv~yL~~~~fdY 172 (267)
T PF04080_consen 93 AIVSMNAWIWSTVFHTRDTPLTEKLDYFSAGATVLFGLYAAIVRIFRLYRRRRLRRIFTALCIAFYIAHVSYLSFVRFDY 172 (267)
T ss_pred HHHHHHHHHHHHHHHHhcccHhhHhHHhhhHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 9999999999999999999999999999999999999999999999995 455678899999999999999999999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhhcCCcc---------hhHH--HHHHHHHHHHHHHhhcCCCCcccchhhhhhhcCcc
Q 025372 160 GLNMKVCLAMGVAQLLIWAIWAGVTRHPSR---------WKLW--LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANI 228 (254)
Q Consensus 160 ~YNM~~nv~~G~~~~~lW~~~~~~~~~~~~---------~~~~--~~v~~~~~am~LEl~DFpP~~~~iDAHALWHl~Ti 228 (254)
||||++||++|++|+++|+.||+.++++.+ ++++ ++++++.+||+|||+||||+++++|||||||++||
T Consensus 173 ~YNM~~nv~~G~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~lam~LEl~DFpP~~~~lDAHALWHl~Ti 252 (267)
T PF04080_consen 173 GYNMKANVAVGLLQNILWLLWSFRNYRRYPSVKKSYSKRWKLWPILFVVLTILAMSLELFDFPPIFWLLDAHALWHLATI 252 (267)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHhhccCcccccchHHHHHHHHHh
Confidence 999999999999999999999998765433 7777 67889999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhHH
Q 025372 229 PLTYLWWSFIRDDSE 243 (254)
Q Consensus 229 p~~~~wy~Fl~~D~~ 243 (254)
||+++||+|+++|+|
T Consensus 253 p~~~~wy~Fl~~D~~ 267 (267)
T PF04080_consen 253 PPTYLWYDFLIDDAE 267 (267)
T ss_pred hHHHHHHHHHHHhcC
Confidence 999999999999986
No 2
>KOG2970 consensus Predicted membrane protein [Function unknown]
Probab=100.00 E-value=1.9e-94 Score=656.97 Aligned_cols=243 Identities=48% Similarity=0.888 Sum_probs=228.0
Q ss_pred CchhhHHHHHcCCCCcccccccccccccccccHHHHHHHHhhHHHHHhhhHHHHHHHHhhCCCCCCCccchhhhhHHHHH
Q 025372 1 MLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIY 80 (254)
Q Consensus 1 ~~~~~~~R~~~g~~v~QFhGKWPF~Rv~GiQEp~SvlFSllNl~~h~~g~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 80 (254)
|.++|.+|+++|+|++||||||||+||+||||||||+||++|+++|++|+.+ +|.+.+++++.+|+ ++|++|
T Consensus 73 m~~t~~~~~~~~~pi~qfhGKWpFlrvlGiQEp~SviFS~lNl~~h~~g~~~------~r~~~~~~~~~r~~--~l~~I~ 144 (319)
T KOG2970|consen 73 MWTTESEFIKRGGPIPQFHGKWPFLRVLGIQEPFSVIFSFLNLITHYKGLVK------FRRPKKPNRPTRYE--RLWLIY 144 (319)
T ss_pred eeeehhhHHhcCCccccccCCcchhhhhhccchHHHHHHHHHHHHHHHHHhh------eecccCCCCcchhc--cchhhH
Confidence 7889999999999999999999999999999999999999999999999644 67777888888888 799999
Q ss_pred HHHHHHHHHHHHHhhccCCCcchhhhHHhhHHHHHHHHHHHHHHhccCChh-HHHHHHHHHHHHHHHHHhhhcccccccc
Q 025372 81 GILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDE-AARVMVAAPLIAFVTTHILYLNFYKLDH 159 (254)
Q Consensus 81 ~~v~~~aW~wStiFH~RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~-~~r~~~~~~~~~~~~~Hv~yL~~~~fdY 159 (254)
+++|||||+||+|||+||+++|||||||+|+++|+||+|++++|.++++.. ..|.+++++++++|++|+.||++++|||
T Consensus 145 a~i~mnawiwSsvFH~rD~~lTEklDYf~A~~~vlf~ly~a~ir~~~i~~~~~~~~~ita~fla~ya~Hi~yls~~~fdY 224 (319)
T KOG2970|consen 145 AYIGMNAWIWSSVFHIRDVPLTEKLDYFSAYLTVLFGLYVALIRMLSIQSLPALRGMITAIFLAFYANHILYLSFYNFDY 224 (319)
T ss_pred HHHHHHHHHHHHhhhhcCCchHhhhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHhheeccc
Confidence 999999999999999999999999999999999999999999999999876 7789999999999999999999999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHh-hhcCCcchhHHHH--HHHHHHHHHHHhhcCCCCcccchhhhhhhcCcchhHHHHHH
Q 025372 160 GLNMKVCLAMGVAQLLIWAIWAG-VTRHPSRWKLWLV--VVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWS 236 (254)
Q Consensus 160 ~YNM~~nv~~G~~~~~lW~~~~~-~~~~~~~~~~~~~--v~~~~~am~LEl~DFpP~~~~iDAHALWHl~Tip~~~~wy~ 236 (254)
||||++|+++|++|+++|..|++ .+++|+.|+++++ +.+..+||+||++||||+.|++|||||||++|||++++||+
T Consensus 225 gyNm~~~v~~g~iq~vlw~~~~~~~~~~~s~~~i~~~~i~~~~~LA~sLEi~DFpPy~~~iDAHALWHlaTIplt~~~~~ 304 (319)
T KOG2970|consen 225 GYNMIVCVAIGVIQLVLWLVWSFKKRNLPSFWRIWPILIVIFFFLAMSLEIFDFPPYAWLIDAHALWHLATIPLTILWYD 304 (319)
T ss_pred ccceeeehhhHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHhhcCCchhhhcchHHHHHhhcCccHHHHHH
Confidence 99999999999999999999995 4678999997754 44559999999999999999999999999999999999999
Q ss_pred HHHhhHHHHHHhhhc
Q 025372 237 FIRDDSEFRTTALLK 251 (254)
Q Consensus 237 Fl~~D~~~~~~~~~~ 251 (254)
|+.+|++++|+..+|
T Consensus 305 Fv~~d~~~~t~~~l~ 319 (319)
T KOG2970|consen 305 FVSDDYDFATGVRLK 319 (319)
T ss_pred HhhchhhhhcceecC
Confidence 999999999987664
No 3
>COG5237 PER1 Predicted membrane protein [Function unknown]
Probab=100.00 E-value=8.4e-76 Score=525.19 Aligned_cols=233 Identities=30% Similarity=0.396 Sum_probs=204.2
Q ss_pred hHHHHHcCCCCcccccccccccccccccHHHHHHHHhhHHHHHhhhHHHHHHHHhhCCCC-CCCccchhhhhHHHHHHHH
Q 025372 5 EGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLR-PDKKTYYEYTGLWHIYGIL 83 (254)
Q Consensus 5 ~~~R~~~g~~v~QFhGKWPF~Rv~GiQEp~SvlFSllNl~~h~~g~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~~v 83 (254)
|+-|.++++|+.||||||||.||+||||++|++||++|+++||.|+.++ +++.+.. +.++.+|. .++++
T Consensus 74 ~~~~~~~n~~~~q~hGkW~F~rVlG~qEfFS~~FS~~Nfi~hy~gfh~m----~r~i~~e~~~~R~~~l------~wv~i 143 (319)
T COG5237 74 LKFTNSGNIKIYQRHGKWGFQRVLGMQEFFSALFSFMNFITHYIGFHRM----LRKILRETRLGRLYYL------QWVYI 143 (319)
T ss_pred HHHhccCCchhhhhcCccceeeehhHHHHHHHHHHHHHHHHHHHHHHHH----HHHhcccccccceEEe------eHHHH
Confidence 5678889999999999999999999999999999999999999999774 2344433 33444543 35799
Q ss_pred HHHHHHHHHHhhccCCCcchhhhHHhhHHHHHHHHHHHHHHhccCCh----hHHHHHHHHHHHHHHHHHhhhcccccccc
Q 025372 84 AMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRD----EAARVMVAAPLIAFVTTHILYLNFYKLDH 159 (254)
Q Consensus 84 ~~~aW~wStiFH~RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~----~~~r~~~~~~~~~~~~~Hv~yL~~~~fdY 159 (254)
||+||+||+|||+||+++|||+|||+|++.|++|+|++.+|..++.. +..|...+++++++|+.||.||++++|||
T Consensus 144 gmlAwi~SsvFHird~~iTeklDYF~AgltVLfGfy~~lvrm~~~~~~p~~K~~~~~~~aifia~fa~Hi~rls~i~fdY 223 (319)
T COG5237 144 GMLAWISSSVFHIRDNTITEKLDYFLAGLTVLFGFYMALVRMILIVSPPIEKATRGPLQAIFIAFFAYHIHRLSNIEFDY 223 (319)
T ss_pred HHHHHHHHhheeeeccchhhhHHHHHhhHHHHHHHHHHHHHHHHhhcCchHHHHHhHHHHHHHHHHHHHHHHHhhcccee
Confidence 99999999999999999999999999999999999999999988754 34566778999999999999999999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhhcCC--cchhHH--HHHHHHHHHHHHHhhcCCCCcccchhhhhhhcCcchhHHHHH
Q 025372 160 GLNMKVCLAMGVAQLLIWAIWAGVTRHP--SRWKLW--LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWW 235 (254)
Q Consensus 160 ~YNM~~nv~~G~~~~~lW~~~~~~~~~~--~~~~~~--~~v~~~~~am~LEl~DFpP~~~~iDAHALWHl~Tip~~~~wy 235 (254)
+|||++|+++|+.|+++|...+..+++. ..+|-+ .+|....+||||||+||||+-++||||||||++|+|++.+.|
T Consensus 224 ~YNm~~n~aigv~q~iL~~~~s~~ny~~~g~~~kr~p~~~v~~~~lA~slElfDf~pya~lIDaHAlWHL~t~~~t~~ly 303 (319)
T COG5237 224 VYNMISNCAIGVTQTILSHLVSFLNYRKLGHTFKRIPLFFVFFFFLAGSLELFDFPPYAYLIDAHALWHLITCISTPFLY 303 (319)
T ss_pred eehhhhcchHHHHHHHHHHHHHHhhhHhhhhhhhhhhHHHHHHHHHhhhhhhhccCcHHHHhhHHHHhHhhhccchHHHH
Confidence 9999999999999999999999877654 223433 356778899999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHH
Q 025372 236 SFIRDDSEFRTT 247 (254)
Q Consensus 236 ~Fl~~D~~~~~~ 247 (254)
+|..+|+.|-.+
T Consensus 304 ~F~~~d~~y~~n 315 (319)
T COG5237 304 LFWSGDVYYHGN 315 (319)
T ss_pred Hhhhcceeeecc
Confidence 999999987654
No 4
>PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins. This family includes proteins that are hemolysin-III homologs.; GO: 0016021 integral to membrane
Probab=97.66 E-value=0.0019 Score=55.89 Aligned_cols=153 Identities=19% Similarity=0.190 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHhhc-------cCCCcchhhhHHhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHH-HHHHHHHh
Q 025372 78 HIYGILAMNSWFWSAVFHS-------RDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPL-IAFVTTHI 149 (254)
Q Consensus 78 ~~~~~v~~~aW~wStiFH~-------RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~r~~~~~~~-~~~~~~Hv 149 (254)
.+|....+.-.+.||++|+ +.-..-.|+||.+-...+..+..-...-.+.-++........... +++....
T Consensus 45 ~~~~~~~~~~~~~St~yH~f~~~s~~~~~~~~~~lD~~gI~l~i~gs~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~- 123 (222)
T PF03006_consen 45 LIYLLSAILCFLCSTLYHLFSCHSEGKVYHIFLRLDYAGIFLLIAGSYTPFIYYGFYCHPWLGWFYLAFIWILALIGIV- 123 (222)
T ss_pred HHHHHHHHHHHHhHHHhhCCCcCCcHHHHHHHHhcchhhhhHhHhhhhhhHHHhhccccchHHHHHHHHHHHHHHHhHH-
Confidence 4567777777899999999 345667899999976666555443332223111222221111111 1111111
Q ss_pred hhccccccc----ccchhhhHHHHHHHHHHHHHHHHhhhc---CCc-chhHHHHHHHHHHHHHHHhhcCCCCc--ccch-
Q 025372 150 LYLNFYKLD----HGLNMKVCLAMGVAQLLIWAIWAGVTR---HPS-RWKLWLVVVGEGLAMLLQIYDFPPYR--GFVD- 218 (254)
Q Consensus 150 ~yL~~~~fd----Y~YNM~~nv~~G~~~~~lW~~~~~~~~---~~~-~~~~~~~v~~~~~am~LEl~DFpP~~--~~iD- 218 (254)
..+ ...++ ..--+.+-++.|....+...-...... .|. ......-.++-.+|+.+-..++|.-+ +-+|
T Consensus 124 ~~~-~~~~~~~~~~~~r~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~G~~fy~~~~PEr~~pg~fD~ 202 (222)
T PF03006_consen 124 LSL-FPCFSSPRFRWLRTIFFLLLGWSGIIPIFHRIFFLGGWGSPDPLWLLILGGVLYLLGAVFYATRIPERWFPGKFDI 202 (222)
T ss_pred hhc-chhhcCCccceeeehHhHHHHHHHHhhhHHHHHHhccccchHHHHHHHHHHHHHHHhHHHhhhccccccCCCCcCC
Confidence 111 11211 223334445555544444332111111 111 11112223455678889999987632 2344
Q ss_pred ---hhhhhhcCcchhHH
Q 025372 219 ---AHALYHAANIPLTY 232 (254)
Q Consensus 219 ---AHALWHl~Tip~~~ 232 (254)
+|.+||+.++--+.
T Consensus 203 ~g~sHqi~Hi~v~~~~~ 219 (222)
T PF03006_consen 203 WGHSHQIWHIFVVLAAL 219 (222)
T ss_pred CCccHHHHHHHHHHHHH
Confidence 99999998765444
No 5
>PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases. Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane
Probab=97.51 E-value=0.012 Score=53.36 Aligned_cols=186 Identities=16% Similarity=0.070 Sum_probs=95.5
Q ss_pred cccHHHHHHHHhhHHHHHhhhHHHHHHHHhhCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHhhccCCCcchhhhHHh
Q 025372 30 IQEPVAVALSALNLSIQFHGWMSFFILLYYKLPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDVELTEKLDCSS 109 (254)
Q Consensus 30 iQEp~SvlFSllNl~~h~~g~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~v~~~aW~wStiFH~RD~~~TE~lDYf~ 109 (254)
+=||.=++-++.=+++-..|+++. ++ .+.+. .+. ..+..+..++ +-|+.||+-=...|+-+|=..
T Consensus 24 iAEf~NtlSNl~fi~~al~gl~~~-----~~--~~~~~-~~~------l~~~~l~~VG-iGS~~FHaTl~~~~ql~DelP 88 (262)
T PF05875_consen 24 IAEFWNTLSNLAFIVAALYGLYLA-----RR--RGLER-RFA------LLYLGLALVG-IGSFLFHATLSYWTQLLDELP 88 (262)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHH-----hh--ccccc-hhH------HHHHHHHHHH-HhHHHHHhChhhhHHHhhhhh
Confidence 569998877777777766666542 11 11111 111 1233333444 889999998889999999776
Q ss_pred hHHHHHHHHHHHHHHhccCChhHHHHHHHHHH----HHHHHHHhhhcccccccccchhhhHHHHHHHHHHHHHHHHh--h
Q 025372 110 AVALLGFNFILAILRAFSVRDEAARVMVAAPL----IAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAG--V 183 (254)
Q Consensus 110 A~a~vl~~l~~~~~R~f~l~~~~~r~~~~~~~----~~~~~~Hv~yL~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~--~ 183 (254)
-.-..+..++....+.. .++..|...+..+ ++..+.|...= +. . .-++.+|.....+.+.-.. .
T Consensus 89 Ml~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~~~~t~~~~~~~---~p-~----~~~~~f~~~~~~~~~~~~~~~~ 158 (262)
T PF05875_consen 89 MLWATLLFLYIVLTRRY--SSPRYRLALPLLLFIYAVVVTVLYFVLD---NP-V----FHQIAFASLVLLVILRSIYLIR 158 (262)
T ss_pred HHHHHHHHHHHHhcccc--cCchhhHHHHHHHHHHHHHHHHHHhhhc---cc-h----hhhhhHHHHHHHHHHHHHHHHH
Confidence 54333333333333322 1111222222221 22223333311 11 1 1122333333333331111 1
Q ss_pred h------cCCcchhHH-HHHHHHHHHHHHHhhcC--------------CCCcccchhhhhhhcCcchhHHHHHHHHHh
Q 025372 184 T------RHPSRWKLW-LVVVGEGLAMLLQIYDF--------------PPYRGFVDAHALYHAANIPLTYLWWSFIRD 240 (254)
Q Consensus 184 ~------~~~~~~~~~-~~v~~~~~am~LEl~DF--------------pP~~~~iDAHALWHl~Tip~~~~wy~Fl~~ 240 (254)
. +++...++. ..++...+|..+-..|- .|+..++--|++||+.|---+++.-.+.+-
T Consensus 159 ~~~~~~~~~~~~~~l~~~~~~~f~~a~~~W~iD~~~C~~~~~~~~~~g~p~~~~le~H~~WHilt~ig~Y~~~~~~~~ 236 (262)
T PF05875_consen 159 RRVRDACRRRRARRLLLFGLALFLVAFFFWNIDRIFCSSLRAIRFPYGLPLGFLLELHAWWHILTGIGAYLLIVFVAY 236 (262)
T ss_pred HhcCchhhchHHHHHHHHHHHHHHHHHHHHHhHHHHHccccccccccCCcchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 112222332 33455667788888886 355556789999999998888877776543
No 6
>PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 220 to 787 amino acids in length.
Probab=97.02 E-value=0.014 Score=51.01 Aligned_cols=93 Identities=14% Similarity=0.155 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHhhccC-CC----cc----hhhhHHhhHHHHHHHHHHHHHHhccCChhHHH--HHHHHHHHHHHHHHh
Q 025372 81 GILAMNSWFWSAVFHSRD-VE----LT----EKLDCSSAVALLGFNFILAILRAFSVRDEAAR--VMVAAPLIAFVTTHI 149 (254)
Q Consensus 81 ~~v~~~aW~wStiFH~RD-~~----~T----E~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~r--~~~~~~~~~~~~~Hv 149 (254)
+.++..+=++|+.+|+.| .+ ++ ++|||......++. .....+..-++++...+ .++.+.++++..
T Consensus 34 a~v~~~tm~~S~~YHacd~~~~~~~lc~~~~~~L~~~~~~~s~~~-~~vtl~~~a~~~~~~~~~l~~~~~~~~ai~~--- 109 (186)
T PF12036_consen 34 AFVYTFTMFFSTFYHACDSGPGEIFLCIMDWHRLQNIDFIGSFLS-IWVTLCAMARLDEPLKSVLHYFGALVIAIFQ--- 109 (186)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEeechHHHHHHHHHHHHHHH-HHHHHHHhccCCHHHHHHHHHHHHHHHHHHH---
Confidence 788889999999999999 55 44 47888776544332 23333333334433222 233333333332
Q ss_pred hhcccccccccchhhhHHHHHHHH-HHHHHHHH
Q 025372 150 LYLNFYKLDHGLNMKVCLAMGVAQ-LLIWAIWA 181 (254)
Q Consensus 150 ~yL~~~~fdY~YNM~~nv~~G~~~-~~lW~~~~ 181 (254)
.. .+||+. |+..-+++|++- .+-|+..+
T Consensus 110 -~~--~~~~~~-~~~~Pi~~~~~i~~~~w~~r~ 138 (186)
T PF12036_consen 110 -QK--DRWSLW-NTIGPILIGLLILLVSWLYRC 138 (186)
T ss_pred -hh--Ccccch-hhHHHHHHHHHHHHHHHheec
Confidence 22 478854 556666666643 33444333
No 7
>TIGR01065 hlyIII channel protein, hemolysin III family. This family includes proteins from pathogenic and non-pathogenic bacteria, Homo sapiens and Drosophila. In Bacillus cereus, a pathogen, it has been show to function as a channel-forming cytolysin. The human protein is expressed preferentially in mature macrophages, consistent with a role cytolytic role.
Probab=96.51 E-value=0.18 Score=44.39 Aligned_cols=151 Identities=17% Similarity=0.153 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccCC-----CcchhhhHHhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHhhh
Q 025372 77 WHIYGILAMNSWFWSAVFHSRDV-----ELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILY 151 (254)
Q Consensus 77 ~~~~~~v~~~aW~wStiFH~RD~-----~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~r~~~~~~~~~~~~~Hv~y 151 (254)
..+|+.-.+..-..||+||+-+. ..-+|+||.+-..+|.-+..-...-.+ +++....+..+..++..+.=+..
T Consensus 39 ~~vy~~~~~~~~~~St~yH~~~~s~~~~~~~~rlD~~gI~~lIaGsytP~~~~~~--~~~~~~~~~~~iw~la~~gi~~~ 116 (204)
T TIGR01065 39 FSIYGISLILLFLVSTLYHSIPKGSKAKNWLRKIDHSMIYVLIAGTYTPFLLLAL--PGPLGWTVLWIIWGLAIGGIIYK 116 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcCchhHHHHHHHccHHHHHHHHHHhhHHHHHHHc--CCcHHHHHHHHHHHHHHHHHHHH
Confidence 35678888888999999998873 155688999877666655443333333 22222222222111111111111
Q ss_pred -cccccccccchhhhHHHHHHHHHHHHHHHHhhhcCCcchhHHHHH---HHHHHHHHHHhhcCCCCcccchhhhhhhcCc
Q 025372 152 -LNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVV---VGEGLAMLLQIYDFPPYRGFVDAHALYHAAN 227 (254)
Q Consensus 152 -L~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~~~~~~~~~~~~~~v---~~~~~am~LEl~DFpP~~~~iDAHALWHl~T 227 (254)
+...+++. .-...=+++|....+..-- ....-+. .-+..++ +.-+.++.+=..|+|--+ |-|.+||+..
T Consensus 117 ~~~~~~~r~-~r~~~y~~~G~~~v~~~~~--~~~~~~~-~~~~~l~~gg~~Y~~G~~fY~~~~p~~~---~~H~iwH~fV 189 (204)
T TIGR01065 117 LFFHKRPRW-LSLFLYLIMGWLVVLVIKP--LYHNLPG-AGFSLLAAGGLLYTVGAIFYALKWPIPF---TYHAIWHLFV 189 (204)
T ss_pred HHccCCCch-hHHHHHHHHHHHHHHHHHH--HHHhCCH-HHHHHHHHHhHHHHcchHheeecCCCCC---CcChHHHHHH
Confidence 11223331 2333344444433222110 1111121 1111111 223456667667877433 2299999988
Q ss_pred chhHHHHHH
Q 025372 228 IPLTYLWWS 236 (254)
Q Consensus 228 ip~~~~wy~ 236 (254)
+--+...|-
T Consensus 190 ~~g~~~h~~ 198 (204)
T TIGR01065 190 LGASACHFV 198 (204)
T ss_pred HHHHHHHHH
Confidence 766665553
No 8
>PRK15087 hemolysin; Provisional
Probab=96.04 E-value=0.43 Score=42.61 Aligned_cols=151 Identities=17% Similarity=0.193 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCC----cchhhhHHhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHhhhc
Q 025372 77 WHIYGILAMNSWFWSAVFHSRDVE----LTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYL 152 (254)
Q Consensus 77 ~~~~~~v~~~aW~wStiFH~RD~~----~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~r~~~~~~~~~~~~~Hv~yL 152 (254)
..+|+.-.+..-..||+||+=..+ +=+|+||.+-..+|.-+..=...-.+ +.+..+.+..+.-....+.=+..+
T Consensus 54 ~~vy~~s~~~l~~~StlYH~~~~~~~~~~~~rlDh~~I~llIaGsytP~~~~~~--~~~~~~~l~~~iW~~a~~Gi~~~~ 131 (219)
T PRK15087 54 YSLYGGSMILLFLASTLYHAIPHQRAKRWLKKFDHCAIYLLIAGTYTPFLLVGL--DSPLARGLMIVIWSLALLGILFKL 131 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHccHHHHHHHHHHhhHHHHHHHc--cCHHHHHHHHHHHHHHHHHHHHHH
Confidence 356888888889999999986522 33469999866555444332222222 223333222221111111111122
Q ss_pred -ccccccccchhhhHHHHHHHHHHHHHHHHhhhcCCcchhHHHHH--HHHHHHHHHHhhcCCCCcccchhhhhhhcCcch
Q 025372 153 -NFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSRWKLWLVV--VGEGLAMLLQIYDFPPYRGFVDAHALYHAANIP 229 (254)
Q Consensus 153 -~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~~~~~~~~~~~~~~v--~~~~~am~LEl~DFpP~~~~iDAHALWHl~Tip 229 (254)
...+|+ ...+..-+++|.+-.+.-. ......+..--.+++. +.-+.++.+=..|-+|+ +|++||+..+.
T Consensus 132 ~~~~~~r-~l~~~~Yl~mGw~~v~~~~--~l~~~~~~~~l~~l~~GG~~Y~~G~~fY~~~~~p~-----~H~IwH~fVl~ 203 (219)
T PRK15087 132 AFAHRFK-VLSLVTYLAMGWLSLIVIY--QLAIKLAIGGVTLLAVGGVVYSLGVIFYVCKRIPY-----NHAIWHGFVLG 203 (219)
T ss_pred HhcCCCc-hHHHHHHHHHHHHHHHHHH--HHHHhCCHHHHHHHHHHhHHHHhhHHHHccCCCCC-----chhHHHHHHHH
Confidence 123444 2344445555554433221 1111222211111111 12245556666676665 89999998877
Q ss_pred hHHHHHHH
Q 025372 230 LTYLWWSF 237 (254)
Q Consensus 230 ~~~~wy~F 237 (254)
=+...|--
T Consensus 204 ga~~H~~a 211 (219)
T PRK15087 204 GSVCHFLA 211 (219)
T ss_pred HHHHHHHH
Confidence 66666543
No 9
>KOG0748 consensus Predicted membrane proteins, contain hemolysin III domain [General function prediction only; Signal transduction mechanisms]
Probab=86.40 E-value=29 Score=32.48 Aligned_cols=155 Identities=19% Similarity=0.183 Sum_probs=84.3
Q ss_pred HHHhhccCCC------cchhhhHHhhHHHHHHHHHHHHHHhccCChhHHHHHH-HHHHH-HHHHHHhhhcccccc--ccc
Q 025372 91 SAVFHSRDVE------LTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMV-AAPLI-AFVTTHILYLNFYKL--DHG 160 (254)
Q Consensus 91 StiFH~RD~~------~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~r~~~-~~~~~-~~~~~Hv~yL~~~~f--dY~ 160 (254)
|+++|+=-.- .=-||||.+-.+.+.-+......-.|.-... .|.+. ...++ .+.+.=+. + ..++ .+-
T Consensus 98 S~~~H~~~~~s~~~~~~~~~lDY~GIs~li~gS~~~~~yy~f~c~~~-~~~iy~~~~~~lgi~~~~~~-l-~~~~~~~~~ 174 (286)
T KOG0748|consen 98 SSLYHLFSCHSEKVSRFFLKLDYAGISLLIIGSFLPIIYYAFYCHPF-FRLIYLPIILVLGLLAIFVS-L-SDKFRTPKR 174 (286)
T ss_pred HHHHHHHhcccHHHHHHHHHccHHhhHHHHHHHHHHHHHHhcccchH-HHHHHHHHHHHHHHHHheee-c-hhhhCCccc
Confidence 9999985555 2236899997777666655544444432222 22222 11111 11111111 1 1122 123
Q ss_pred chhhhHHHHHHHHHHH-HHHHHhhh---cCCc-chh---HHHHHHHHHHHHHHHhhcCCCCc--ccchh----hhhhhcC
Q 025372 161 LNMKVCLAMGVAQLLI-WAIWAGVT---RHPS-RWK---LWLVVVGEGLAMLLQIYDFPPYR--GFVDA----HALYHAA 226 (254)
Q Consensus 161 YNM~~nv~~G~~~~~l-W~~~~~~~---~~~~-~~~---~~~~v~~~~~am~LEl~DFpP~~--~~iDA----HALWHl~ 226 (254)
-+-+++++++....-+ =+.+.... +.+. ... ...-.++..+|..+=....|--+ +..|- |-+||..
T Consensus 175 r~~R~~~f~~~~~~~i~P~~h~~~~~g~~~~~~~~~~~~~~~~~~~yi~ga~fY~~riPER~~PGkfD~~G~SHQifHv~ 254 (286)
T KOG0748|consen 175 RPLRAGVFLLLGLSGILPLLHRLILFGGRGPEVVIALGYVILMAVLYLLGALFYATRIPERWFPGKFDIWGHSHQIFHVL 254 (286)
T ss_pred hhhHHHHHHHHHHhhccHhhhheeeecCCccceehhhhHHHHHHHHHHHHHHHhhcCCCcccCCCccceeCChhHHHHHH
Confidence 5677777776642111 11111111 1111 111 11223455677888888888733 45665 9999999
Q ss_pred cchhHHHHHHHHHhhHHHHHHh
Q 025372 227 NIPLTYLWWSFIRDDSEFRTTA 248 (254)
Q Consensus 227 Tip~~~~wy~Fl~~D~~~~~~~ 248 (254)
.+--++.+++=...|.+.+-+.
T Consensus 255 vv~~a~~~~~a~~~~~~~~~~~ 276 (286)
T KOG0748|consen 255 VVLAALFHLEAVLLDYEWRHSH 276 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999987763
No 10
>COG1272 Predicted membrane protein, hemolysin III homolog [General function prediction only]
Probab=61.44 E-value=1.3e+02 Score=27.37 Aligned_cols=41 Identities=24% Similarity=0.401 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHhhccCC-----CcchhhhHHhhHHHHHHHH
Q 025372 78 HIYGILAMNSWFWSAVFHSRDV-----ELTEKLDCSSAVALLGFNF 118 (254)
Q Consensus 78 ~~~~~v~~~aW~wStiFH~RD~-----~~TE~lDYf~A~a~vl~~l 118 (254)
.+|+.--+..-..||++|+=-. .+=+|+||.+-..++.-+-
T Consensus 59 ~iy~~sl~~l~~~St~YH~~~~~~~~k~~~rk~DH~~I~vLIAgSy 104 (226)
T COG1272 59 SIYGLSLFLLFLVSTLYHSIPNGQKAKAILRKFDHSGIYVLIAGSY 104 (226)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHccHHHHHHHHHHhh
Confidence 4566666777899999997543 4668999998766655443
No 11
>PF10277 Frag1: Frag1/DRAM/Sfk1 family; InterPro: IPR019402 This entry includes Frag1, DRAM and Sfk1 proteins. Frag1 (FGF receptor activating protein 1) is a protein that is conserved from fungi to humans. There are four potential iso-prenylation sites throughout the peptide, CILW (x2), CIIW and CIGL. Frag1 is a membrane-spanning protein that is ubiquitously expressed in adult tissues suggesting an important cellular function []. DRAM is a family of proteins conserved from nematodes to humans with six hydrophobic transmembrane regions and an endoplasmic reticulum signal peptide. It is a lysosomal protein that induces macro-autophagy as an effector of p53-mediated death, where p53 is the tumour-suppressor gene that is frequently mutated in cancer. Expression of DRAM is stress-induced []. This region is also part of a family of small plasma membrane proteins, referred to as Sfk1, that may act together with or upstream of Stt4p to generate normal levels of the essential phospholipid PI4P, thus allowing proper localisation of Stt4p to the actin cytoskeleton [, ].
Probab=60.76 E-value=1e+02 Score=25.98 Aligned_cols=90 Identities=18% Similarity=0.236 Sum_probs=54.4
Q ss_pred cccccccccccHHHHHHHHhhHHHHHhhhHHHHHHHHhh--CCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHhhccCC
Q 025372 22 WPFRRVYGIQEPVAVALSALNLSIQFHGWMSFFILLYYK--LPLRPDKKTYYEYTGLWHIYGILAMNSWFWSAVFHSRDV 99 (254)
Q Consensus 22 WPF~Rv~GiQEp~SvlFSllNl~~h~~g~~~~~~~~~~~--~~~~~~~~~~y~~~~~~~~~~~v~~~aW~wStiFH~RD~ 99 (254)
||+.-=.|-++|-+-+|+++-.+.-.-..-. ...+++ .+..++.+.. ...+-.+.+.++..+-.--+.|+..|.
T Consensus 41 ~P~IS~~G~~~Pe~~if~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~--l~~~~~~~g~~~~~gl~~~a~~~~~~~ 116 (215)
T PF10277_consen 41 LPYISDIGAYPPESYIFRFGLNISAFFRLLI--VYLRYRYVRQLASKCSRW--LNILSLVFGLLSAIGLILLAIFQSTEH 116 (215)
T ss_pred cCchhHhhCcCchhHHHHHHHHHHHHHHHHH--HHHHHHHHhhhccchhhH--HHHHHHHHHHHHHHHHHHhhhhccccC
Confidence 9999999999999999998766544332111 111121 1111111111 222345678888888899999988887
Q ss_pred CcchhhhHHhhHHHHHHHH
Q 025372 100 ELTEKLDCSSAVALLGFNF 118 (254)
Q Consensus 100 ~~TE~lDYf~A~a~vl~~l 118 (254)
+ ..-+.+|......+.
T Consensus 117 ~---~~H~~~a~~ff~~~~ 132 (215)
T PF10277_consen 117 P---TVHYIGAVLFFVSSF 132 (215)
T ss_pred H---HHHHHHHHHHHHHHH
Confidence 7 455566654444443
No 12
>PF13965 SID-1_RNA_chan: dsRNA-gated channel SID-1
Probab=59.54 E-value=66 Score=33.07 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=21.2
Q ss_pred cccchhhhhhhcCcch---hHHHHHHHHHhhHHHH
Q 025372 214 RGFVDAHALYHAANIP---LTYLWWSFIRDDSEFR 245 (254)
Q Consensus 214 ~~~iDAHALWHl~Tip---~~~~wy~Fl~~D~~~~ 245 (254)
.+..|.|-+||..... .+.+.-.++-||.+..
T Consensus 528 ~~f~D~HDiwH~~SA~alffsf~~l~~lDddL~~v 562 (570)
T PF13965_consen 528 LGFFDWHDIWHFLSAIALFFSFLVLLTLDDDLDNV 562 (570)
T ss_pred cCccccHHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence 4678999999996643 3444456666666543
No 13
>PF10709 DUF2511: Protein of unknown function (DUF2511); InterPro: IPR019648 This entry is represented by Bacteriophage PsP3, Gp28. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=33.01 E-value=17 Score=28.51 Aligned_cols=14 Identities=29% Similarity=0.643 Sum_probs=10.9
Q ss_pred cccccccccccccc
Q 025372 16 VKYHGKWPFRRVYG 29 (254)
Q Consensus 16 ~QFhGKWPF~Rv~G 29 (254)
.||-+||||.|==|
T Consensus 5 ~~fG~~Wpft~eev 18 (87)
T PF10709_consen 5 FEFGDKWPFTVEEV 18 (87)
T ss_pred HHccCCCCceeeeE
Confidence 37889999998533
No 14
>KOG3402 consensus Predicted membrane protein [Function unknown]
Probab=29.88 E-value=1.9e+02 Score=23.04 Aligned_cols=43 Identities=21% Similarity=0.390 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHhhccCCCcchhhhHHhhHHHHHHHHHHHHH
Q 025372 81 GILAMNSWFWSAVFHSRDVELTEKLDCSSAVALLGFNFILAIL 123 (254)
Q Consensus 81 ~~v~~~aW~wStiFH~RD~~~TE~lDYf~A~a~vl~~l~~~~~ 123 (254)
-++-..-|+||-.||.+-.+=....--.---+.|++++..++.
T Consensus 29 lW~VN~FwFf~~af~~pa~~~r~QIr~YVvrSavGf~fw~ivL 71 (101)
T KOG3402|consen 29 LWFVNCFWFFPVAFHSPAFPHRRQIRNYVVRSAVGFSFWTIVL 71 (101)
T ss_pred HHHHHHHHHhHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667999999999998866555555455566777776543
No 15
>PF15174 PRNT: Prion-related protein testis-specific
Probab=23.81 E-value=32 Score=24.12 Aligned_cols=9 Identities=33% Similarity=0.648 Sum_probs=7.1
Q ss_pred hhhhhhhcC
Q 025372 218 DAHALYHAA 226 (254)
Q Consensus 218 DAHALWHl~ 226 (254)
-.|||||+-
T Consensus 26 vthSLW~Lq 34 (51)
T PF15174_consen 26 VTHSLWHLQ 34 (51)
T ss_pred HHHHHHhhc
Confidence 469999984
No 16
>COG2717 Predicted membrane protein [Function unknown]
Probab=21.83 E-value=4.4e+02 Score=23.78 Aligned_cols=99 Identities=14% Similarity=0.137 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhhccCCC--c--chhhhHHhhHHHHHHHHHHHHHHhccCChhH--HHHHHHHHHHHHHHHHhh-hcccc
Q 025372 83 LAMNSWFWSAVFHSRDVE--L--TEKLDCSSAVALLGFNFILAILRAFSVRDEA--ARVMVAAPLIAFVTTHIL-YLNFY 155 (254)
Q Consensus 83 v~~~aW~wStiFH~RD~~--~--TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~--~r~~~~~~~~~~~~~Hv~-yL~~~ 155 (254)
+...-++|+..-+ .+-. . -|..++++|..+.+-++-.+..+.....+.. .|+..++.|...-+.|.. |+ ..
T Consensus 21 ~p~~~~~~~~~~~-~lg~~p~k~~~~~~g~~al~fLl~~la~tp~~~~~~~~~l~~~Rr~LGl~af~~~~lH~~~Y~-~~ 98 (209)
T COG2717 21 LPVLWLVWLIATG-GLGADPVKEAQHFTGIWALIFLLVTLAVTPLARLLKQPKLIRIRRALGLWAFFYALLHFTAYL-VL 98 (209)
T ss_pred HHHHHHHHHHHHc-CcCcchHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 3333344554444 4432 2 3556777787777777877777555444432 366777777777778864 44 34
Q ss_pred cccccchhhh-------HHHHHHHHHHHHHHHHhh
Q 025372 156 KLDHGLNMKV-------CLAMGVAQLLIWAIWAGV 183 (254)
Q Consensus 156 ~fdY~YNM~~-------nv~~G~~~~~lW~~~~~~ 183 (254)
|-++.-|-.+ =+++|++..++.+..+.-
T Consensus 99 ~l~~~~~~~~~d~~~rpyitiG~iaflll~pLalT 133 (209)
T COG2717 99 DLGLDLALLGLDLLKRPYITIGMIAFLLLIPLALT 133 (209)
T ss_pred HHhccHHHhhHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 4444444433 477888888888876653
No 17
>PF07695 7TMR-DISM_7TM: 7TM diverse intracellular signalling; InterPro: IPR011623 This entry represents the transmembrane region of the 7TM-DISM (7TM Receptors with Diverse Intracellular Signalling Modules) [].
Probab=20.74 E-value=4.7e+02 Score=21.28 Aligned_cols=30 Identities=7% Similarity=0.068 Sum_probs=15.9
Q ss_pred CcchhhhHHhhHHHHHHHHHHHHHHhccCCh
Q 025372 100 ELTEKLDCSSAVALLGFNFILAILRAFSVRD 130 (254)
Q Consensus 100 ~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~ 130 (254)
.+.+++++.+......+... -..+.++.++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~-F~~~~l~~~~ 92 (205)
T PF07695_consen 63 WWSQHLEYLFLMLSFIFFLL-FVRSFLELKR 92 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhCccc
Confidence 46677777776555433333 2234455533
Done!