Query 025377
Match_columns 253
No_of_seqs 283 out of 1220
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 09:06:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025377.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025377hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1we9_A PHD finger family prote 99.7 3.1E-18 1.1E-22 123.4 2.4 59 195-253 4-62 (64)
2 1wep_A PHF8; structural genomi 99.6 1.5E-15 5.2E-20 114.0 4.6 55 195-250 10-64 (79)
3 1wew_A DNA-binding family prot 99.5 1.4E-15 4.9E-20 114.1 2.1 56 195-252 14-75 (78)
4 3kqi_A GRC5, PHD finger protei 99.5 4.3E-16 1.5E-20 116.1 -0.9 54 195-249 8-61 (75)
5 1wee_A PHD finger family prote 99.5 1.7E-15 5.7E-20 112.0 1.8 56 193-250 12-67 (72)
6 2vpb_A Hpygo1, pygopus homolog 99.5 3.4E-16 1.2E-20 114.6 -2.0 53 195-247 6-64 (65)
7 1wem_A Death associated transc 99.5 1.1E-15 3.6E-20 113.8 -1.5 55 195-251 14-72 (76)
8 2kgg_A Histone demethylase jar 99.5 5E-15 1.7E-19 103.4 2.0 49 198-247 3-52 (52)
9 3o70_A PHD finger protein 13; 99.4 2.1E-14 7.2E-19 105.8 2.3 51 195-249 17-67 (68)
10 2xb1_A Pygopus homolog 2, B-ce 99.4 9.2E-15 3.2E-19 115.7 -0.7 54 197-250 3-62 (105)
11 3o7a_A PHD finger protein 13 v 99.4 4.6E-14 1.6E-18 98.4 2.1 48 198-248 4-51 (52)
12 2k16_A Transcription initiatio 99.4 3.9E-14 1.3E-18 104.8 1.7 54 195-250 16-69 (75)
13 2rsd_A E3 SUMO-protein ligase 99.4 5.5E-14 1.9E-18 102.9 1.3 53 197-251 10-67 (68)
14 1weu_A Inhibitor of growth fam 99.4 4.7E-13 1.6E-17 104.1 5.9 52 195-252 34-88 (91)
15 1wen_A Inhibitor of growth fam 99.4 4.7E-13 1.6E-17 99.4 5.5 52 195-252 14-68 (71)
16 2lv9_A Histone-lysine N-methyl 99.3 1.6E-12 5.6E-17 101.4 5.3 50 197-250 28-77 (98)
17 2ri7_A Nucleosome-remodeling f 99.3 3.2E-13 1.1E-17 113.3 0.0 54 195-249 6-59 (174)
18 2g6q_A Inhibitor of growth pro 99.3 9E-13 3.1E-17 95.5 1.4 49 196-250 10-61 (62)
19 3kv5_D JMJC domain-containing 99.3 3.4E-13 1.2E-17 131.0 -1.3 53 195-248 35-87 (488)
20 3c6w_A P28ING5, inhibitor of g 99.3 1E-12 3.5E-17 94.2 1.4 49 196-250 8-59 (59)
21 2vnf_A ING 4, P29ING4, inhibit 99.2 1.1E-12 3.6E-17 94.3 1.3 49 196-250 9-60 (60)
22 3kv4_A PHD finger protein 8; e 99.2 4.5E-13 1.5E-17 129.1 -1.9 53 196-249 4-56 (447)
23 2jmi_A Protein YNG1, ING1 homo 99.1 1.2E-11 4.3E-16 95.9 2.3 48 195-248 24-75 (90)
24 1x4i_A Inhibitor of growth pro 99.1 4.2E-12 1.5E-16 94.0 -2.0 47 196-248 5-54 (70)
25 3pur_A Lysine-specific demethy 99.0 1.1E-10 3.7E-15 114.5 2.1 42 207-248 52-93 (528)
26 3lqh_A Histone-lysine N-methyl 98.9 3.8E-10 1.3E-14 97.3 1.1 40 212-251 20-65 (183)
27 1f62_A Transcription factor WS 98.7 4.4E-09 1.5E-13 72.2 3.2 49 199-249 2-50 (51)
28 2l5u_A Chromodomain-helicase-D 98.7 7.4E-09 2.5E-13 74.2 3.5 52 193-249 7-58 (61)
29 2ku3_A Bromodomain-containing 98.7 1.5E-09 5.1E-14 80.5 -0.4 55 196-253 15-70 (71)
30 1mm2_A MI2-beta; PHD, zinc fin 98.7 1.3E-08 4.5E-13 72.9 3.9 53 194-251 6-58 (61)
31 2l43_A N-teminal domain from h 98.6 3.5E-09 1.2E-13 81.2 0.4 53 196-251 24-77 (88)
32 2yql_A PHD finger protein 21A; 98.6 1E-08 3.4E-13 72.1 2.1 51 194-249 6-56 (56)
33 1xwh_A Autoimmune regulator; P 98.6 1.1E-08 3.7E-13 74.2 1.8 52 195-251 6-57 (66)
34 2e6r_A Jumonji/ARID domain-con 98.6 1.6E-08 5.6E-13 78.0 2.5 52 195-248 14-65 (92)
35 2puy_A PHD finger protein 21A; 98.5 7.9E-09 2.7E-13 73.5 -0.7 50 195-249 3-52 (60)
36 2yt5_A Metal-response element- 98.5 2.3E-08 7.9E-13 71.8 1.2 56 195-250 4-62 (66)
37 2lri_C Autoimmune regulator; Z 98.5 1.1E-07 3.8E-12 69.5 4.3 50 196-250 11-60 (66)
38 3asl_A E3 ubiquitin-protein li 98.4 1.8E-07 6.2E-12 68.8 4.0 50 199-249 20-69 (70)
39 2e6s_A E3 ubiquitin-protein li 98.2 8.8E-07 3E-11 66.5 4.4 49 199-248 28-76 (77)
40 1wev_A Riken cDNA 1110020M19; 98.2 1.8E-07 6.1E-12 71.6 0.4 53 196-249 15-72 (88)
41 4gne_A Histone-lysine N-methyl 98.2 5.6E-07 1.9E-11 71.6 3.2 45 196-247 14-60 (107)
42 3rsn_A SET1/ASH2 histone methy 98.2 1.3E-06 4.3E-11 75.3 5.3 51 197-248 5-58 (177)
43 1fp0_A KAP-1 corepressor; PHD 98.1 3.1E-06 1.1E-10 65.3 5.3 51 194-249 22-72 (88)
44 3shb_A E3 ubiquitin-protein li 98.1 2.2E-06 7.6E-11 64.4 3.7 49 199-248 28-76 (77)
45 3v43_A Histone acetyltransfera 98.1 2.7E-06 9.4E-11 67.1 4.4 50 199-249 63-112 (112)
46 3ask_A E3 ubiquitin-protein li 98.0 4E-06 1.4E-10 74.6 3.6 51 198-249 175-225 (226)
47 4bbq_A Lysine-specific demethy 97.9 4E-06 1.4E-10 65.9 2.3 51 200-250 62-115 (117)
48 2ysm_A Myeloid/lymphoid or mix 97.9 4.6E-06 1.6E-10 65.3 2.5 51 199-251 56-106 (111)
49 2kwj_A Zinc finger protein DPF 97.8 5.3E-06 1.8E-10 65.8 2.0 48 199-248 60-107 (114)
50 2ysm_A Myeloid/lymphoid or mix 97.6 4.2E-05 1.4E-09 59.7 4.1 51 195-247 5-55 (111)
51 3v43_A Histone acetyltransfera 97.2 6.4E-05 2.2E-09 59.2 0.6 51 197-247 5-62 (112)
52 2kwj_A Zinc finger protein DPF 96.9 0.00019 6.3E-09 56.8 0.4 50 198-247 2-59 (114)
53 2lbm_A Transcriptional regulat 96.8 0.00047 1.6E-08 57.3 2.6 52 194-249 60-117 (142)
54 3ql9_A Transcriptional regulat 96.5 0.001 3.5E-08 54.5 2.1 52 194-249 54-111 (129)
55 1iym_A EL5; ring-H2 finger, ub 93.5 0.06 2E-06 35.5 3.2 47 198-249 6-52 (55)
56 2kiz_A E3 ubiquitin-protein li 93.1 0.062 2.1E-06 37.2 2.9 48 196-249 13-60 (69)
57 2ect_A Ring finger protein 126 91.6 0.18 6.1E-06 35.6 3.9 47 197-249 15-61 (78)
58 2ecm_A Ring finger and CHY zin 91.3 0.1 3.5E-06 34.3 2.2 47 198-249 6-52 (55)
59 2l0b_A E3 ubiquitin-protein li 90.5 0.16 5.5E-06 37.5 2.9 48 196-249 39-86 (91)
60 1wil_A KIAA1045 protein; ring 90.2 0.1 3.4E-06 40.2 1.5 50 197-248 15-75 (89)
61 2ep4_A Ring finger protein 24; 89.3 0.22 7.6E-06 34.8 2.6 46 198-249 16-61 (74)
62 1v87_A Deltex protein 2; ring- 88.7 0.18 6.1E-06 38.2 1.9 50 199-248 27-90 (114)
63 2d8s_A Cellular modulator of i 88.0 0.29 9.9E-06 36.1 2.6 48 198-248 16-66 (80)
64 2e61_A Zinc finger CW-type PWW 87.7 0.4 1.4E-05 35.0 3.2 33 210-245 15-49 (69)
65 1x4j_A Ring finger protein 38; 86.6 0.19 6.5E-06 35.4 0.8 47 197-249 23-69 (75)
66 2l7p_A Histone-lysine N-methyl 86.6 0.32 1.1E-05 38.2 2.2 35 209-245 24-58 (100)
67 2ct2_A Tripartite motif protei 85.3 0.56 1.9E-05 33.4 2.9 50 197-249 15-65 (88)
68 2csy_A Zinc finger protein 183 82.8 0.68 2.3E-05 32.9 2.4 46 195-249 13-58 (81)
69 3a1b_A DNA (cytosine-5)-methyl 81.3 0.46 1.6E-05 40.1 1.1 54 193-250 75-135 (159)
70 2yur_A Retinoblastoma-binding 80.5 1.3 4.5E-05 31.0 3.2 48 196-249 14-61 (74)
71 1bor_A Transcription factor PM 79.6 1.4 4.9E-05 29.4 3.0 43 195-249 4-46 (56)
72 2egp_A Tripartite motif-contai 78.9 1.7 5.9E-05 30.2 3.4 49 197-249 12-62 (79)
73 2pv0_B DNA (cytosine-5)-methyl 78.5 0.49 1.7E-05 44.9 0.5 54 193-250 89-149 (386)
74 2d8t_A Dactylidin, ring finger 77.9 1.1 3.7E-05 31.1 2.0 43 198-249 16-58 (71)
75 2lq6_A Bromodomain-containing 76.7 1.5 5.2E-05 32.9 2.7 33 195-229 15-49 (87)
76 2ecl_A Ring-box protein 2; RNF 76.6 0.6 2.1E-05 33.7 0.4 45 200-249 18-73 (81)
77 2ea6_A Ring finger protein 4; 75.2 0.82 2.8E-05 30.9 0.7 49 197-250 15-66 (69)
78 2ysl_A Tripartite motif-contai 75.0 1.7 6E-05 29.8 2.4 48 197-250 20-67 (73)
79 2ecj_A Tripartite motif-contai 70.3 2.7 9.1E-05 27.4 2.4 44 197-246 15-58 (58)
80 3dpl_R Ring-box protein 1; ubi 70.1 2.1 7.1E-05 33.0 2.0 46 199-249 39-98 (106)
81 1e4u_A Transcriptional repress 69.4 1.6 5.5E-05 31.7 1.2 48 197-249 11-59 (78)
82 2ckl_B Ubiquitin ligase protei 69.1 1.9 6.4E-05 34.8 1.7 47 196-249 53-99 (165)
83 2ecy_A TNF receptor-associated 68.9 2.3 7.8E-05 28.9 1.8 45 197-249 15-59 (66)
84 3lrq_A E3 ubiquitin-protein li 68.2 1.9 6.4E-05 32.1 1.4 46 197-249 22-67 (100)
85 3k1l_B Fancl; UBC, ring, RWD, 67.3 5.3 0.00018 37.9 4.5 54 196-249 307-370 (381)
86 2ecv_A Tripartite motif-contai 66.8 2.2 7.5E-05 29.7 1.5 48 198-249 20-68 (85)
87 2xeu_A Ring finger protein 4; 65.4 1.4 4.8E-05 29.3 0.2 47 198-249 4-53 (64)
88 2a20_A Regulating synaptic mem 65.0 2.2 7.6E-05 30.7 1.1 54 196-250 8-61 (62)
89 2djb_A Polycomb group ring fin 64.8 2.8 9.5E-05 29.0 1.7 45 197-249 15-59 (72)
90 2ysj_A Tripartite motif-contai 63.8 2.8 9.6E-05 28.1 1.5 44 197-246 20-63 (63)
91 3ng2_A RNF4, snurf, ring finge 62.5 1.2 4.1E-05 30.4 -0.6 47 198-249 11-60 (71)
92 1v5n_A PDI-like hypothetical p 61.5 5 0.00017 30.0 2.7 36 198-235 48-83 (89)
93 3ztg_A E3 ubiquitin-protein li 61.5 3.9 0.00013 29.4 2.0 49 195-249 11-59 (92)
94 1zbd_B Rabphilin-3A; G protein 59.4 3.1 0.0001 33.7 1.2 53 196-249 54-107 (134)
95 4a0k_B E3 ubiquitin-protein li 59.1 2.3 7.8E-05 33.6 0.4 46 199-249 50-109 (117)
96 1t1h_A Gspef-atpub14, armadill 58.7 4.8 0.00016 28.0 2.0 46 196-249 7-52 (78)
97 2ecw_A Tripartite motif-contai 58.1 3.8 0.00013 28.5 1.4 48 198-249 20-68 (85)
98 2ckl_A Polycomb group ring fin 56.7 4.7 0.00016 30.1 1.8 45 197-249 15-59 (108)
99 3l11_A E3 ubiquitin-protein li 55.9 4.6 0.00016 30.4 1.6 45 197-249 15-59 (115)
100 2y43_A E3 ubiquitin-protein li 54.2 5.8 0.0002 29.0 1.9 45 197-249 22-66 (99)
101 1vyx_A ORF K3, K3RING; zinc-bi 53.7 2.2 7.4E-05 29.7 -0.5 49 196-249 5-56 (60)
102 1chc_A Equine herpes virus-1 r 53.7 3.8 0.00013 27.7 0.7 44 198-249 6-49 (68)
103 1jm7_A BRCA1, breast cancer ty 53.3 4.5 0.00016 29.9 1.2 47 197-249 21-67 (112)
104 2ecn_A Ring finger protein 141 53.2 2.1 7.2E-05 29.3 -0.7 42 197-248 15-56 (70)
105 3fl2_A E3 ubiquitin-protein li 50.7 3.5 0.00012 31.5 0.2 44 198-249 53-96 (124)
106 3nw0_A Non-structural maintena 50.2 8.1 0.00028 33.7 2.5 47 196-248 179-225 (238)
107 4ayc_A E3 ubiquitin-protein li 49.1 4.5 0.00015 31.7 0.6 43 198-249 54-96 (138)
108 1g25_A CDK-activating kinase a 44.9 6.9 0.00023 26.3 0.9 50 197-250 3-53 (65)
109 1weq_A PHD finger protein 7; s 43.9 25 0.00085 26.6 4.0 34 211-248 44-78 (85)
110 2ct0_A Non-SMC element 1 homol 43.4 13 0.00043 27.0 2.2 45 198-248 16-60 (74)
111 2vrw_B P95VAV, VAV1, proto-onc 37.6 24 0.00082 32.0 3.6 38 194-231 354-392 (406)
112 2fiy_A Protein FDHE homolog; F 37.0 13 0.00045 33.9 1.8 53 196-248 181-261 (309)
113 1jm7_B BARD1, BRCA1-associated 35.6 20 0.00069 27.0 2.4 43 197-249 22-64 (117)
114 1z6u_A NP95-like ring finger p 35.2 13 0.00046 29.8 1.3 45 197-249 78-122 (150)
115 2zet_C Melanophilin; complex, 35.0 7 0.00024 32.3 -0.4 50 196-249 67-117 (153)
116 1faq_A RAF-1; transferase, ser 34.1 35 0.0012 22.1 3.1 34 196-232 13-46 (52)
117 4ap4_A E3 ubiquitin ligase RNF 33.7 9.6 0.00033 28.5 0.2 48 197-249 7-57 (133)
118 2fnf_X Putative RAS effector N 33.5 38 0.0013 24.1 3.4 36 195-232 33-68 (72)
119 4dmb_A HD domain-containing pr 33.5 22 0.00074 30.6 2.5 40 94-139 46-85 (204)
120 1ptq_A Protein kinase C delta 33.4 32 0.0011 22.1 2.8 36 196-231 10-46 (50)
121 2enn_A NPKC-theta, protein kin 33.1 38 0.0013 24.2 3.4 37 195-231 32-69 (77)
122 2d8v_A Zinc finger FYVE domain 32.2 26 0.00089 25.5 2.3 30 194-228 5-35 (67)
123 3u5n_A E3 ubiquitin-protein li 32.0 20 0.00067 30.2 1.9 13 194-206 4-16 (207)
124 3hct_A TNF receptor-associated 31.7 20 0.00069 27.0 1.8 45 197-249 18-62 (118)
125 2pk7_A Uncharacterized protein 31.0 24 0.00083 25.4 2.0 31 196-226 7-39 (69)
126 2js4_A UPF0434 protein BB2007; 30.8 25 0.00085 25.4 2.0 31 196-226 7-39 (70)
127 2hf1_A Tetraacyldisaccharide-1 30.4 23 0.0008 25.4 1.8 29 197-225 8-38 (68)
128 2yuu_A NPKC-delta, protein kin 30.2 51 0.0017 23.8 3.7 37 195-231 26-63 (83)
129 2jr6_A UPF0434 protein NMA0874 30.1 26 0.0009 25.1 2.1 30 196-225 7-38 (68)
130 1dx8_A Rubredoxin; electron tr 29.3 24 0.00082 25.5 1.7 45 196-250 6-50 (70)
131 2jny_A Uncharacterized BCR; st 28.4 29 0.001 24.9 2.0 30 196-225 9-40 (67)
132 2kn9_A Rubredoxin; metalloprot 28.1 20 0.00067 26.9 1.1 45 196-250 26-70 (81)
133 2enz_A NPKC-theta, protein kin 28.1 52 0.0018 22.6 3.3 37 196-232 22-59 (65)
134 2xzl_A ATP-dependent helicase 27.7 28 0.00096 35.3 2.5 31 198-230 12-42 (802)
135 2l6l_A DNAJ homolog subfamily 26.9 20 0.0007 28.6 1.1 30 195-225 110-145 (155)
136 2eli_A Protein kinase C alpha 26.2 66 0.0023 23.3 3.7 37 196-232 27-64 (85)
137 4gne_A Histone-lysine N-methyl 25.9 76 0.0026 24.5 4.2 29 214-243 70-98 (107)
138 6rxn_A Rubredoxin; electron tr 25.8 36 0.0012 22.7 2.0 13 238-250 28-40 (46)
139 2kpi_A Uncharacterized protein 24.7 33 0.0011 23.6 1.7 31 196-226 9-41 (56)
140 3g2b_A Coenzyme PQQ synthesis 23.3 63 0.0022 24.2 3.2 32 9-40 55-86 (95)
141 2gz4_A Hypothetical protein AT 23.2 48 0.0016 28.5 2.8 83 56-146 8-100 (207)
142 1y8f_A UNC-13 homolog A, MUNC1 23.1 48 0.0016 22.9 2.3 37 196-232 23-60 (66)
143 1rfh_A RAS association (ralgds 22.8 46 0.0016 22.6 2.1 36 195-232 20-55 (59)
144 3uk3_C Zinc finger protein 217 22.4 64 0.0022 19.7 2.7 9 240-248 32-40 (57)
145 1rmd_A RAG1; V(D)J recombinati 22.1 33 0.0011 25.5 1.4 45 197-249 23-67 (116)
146 2wjy_A Regulator of nonsense t 21.9 32 0.0011 34.9 1.6 32 198-231 7-38 (800)
147 3hcs_A TNF receptor-associated 21.8 38 0.0013 27.0 1.8 46 196-249 17-62 (170)
148 2db6_A SH3 and cysteine rich d 21.6 27 0.00093 24.8 0.8 38 195-232 26-64 (74)
149 1yop_A KTI11P; zinc finger, me 21.2 39 0.0013 25.3 1.6 29 196-225 22-57 (83)
150 1wge_A Hypothetical protein 26 20.2 64 0.0022 24.1 2.6 29 196-225 29-64 (83)
151 2lv2_A Insulinoma-associated p 20.0 59 0.002 23.4 2.4 11 198-208 29-39 (85)
No 1
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.70 E-value=3.1e-18 Score=123.41 Aligned_cols=59 Identities=80% Similarity=1.578 Sum_probs=52.8
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcCCCC
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 253 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr~R~ 253 (253)
.+..+|++|+++|+++++|||||.|+.|||+.|||++...++.++.|+|+.|..|++|+
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~~~ 62 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSGPS 62 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTCSS
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcCCCC
Confidence 45578989999998789999999999999999999998877667899999999999884
No 2
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.56 E-value=1.5e-15 Score=114.01 Aligned_cols=55 Identities=36% Similarity=0.906 Sum_probs=48.0
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
.+..+| +|+++++++++|||||.|+.|||..||+++...+..++.|+|+.|..++
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 344566 9999997789999999999999999999999877667899999999654
No 3
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.53 E-value=1.4e-15 Score=114.12 Aligned_cols=56 Identities=21% Similarity=0.548 Sum_probs=46.6
Q ss_pred cCcceecccCCcccCCCceEEcc--CCCCeeeccccccCcccc----CCCCeEEcCCCCCcCCC
Q 025377 195 HGETLCGACGENYAADEFWICCD--VCEKWFHGKCVKITPARA----EHIKQYKCPSCSNKRAR 252 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD--~Ce~WfH~~CVgit~~~a----~~id~y~Cp~C~~Kr~R 252 (253)
.+.++| +|++++ ++++||||| .|..|||+.||||+...+ ..+++|+|+.|..++.+
T Consensus 14 ~~~~~C-iC~~~~-~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~~ 75 (78)
T 1wew_A 14 EIKVRC-VCGNSL-ETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CCCCCC-SSCCCC-CCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred CCCEEe-ECCCcC-CCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcccCC
Confidence 355666 999995 468999999 999999999999998765 45679999999977654
No 4
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=99.53 E-value=4.3e-16 Score=116.07 Aligned_cols=54 Identities=37% Similarity=0.958 Sum_probs=46.6
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.+..+| +|+++|+++++|||||.|+.|||+.|||++...+..++.|+|+.|..+
T Consensus 8 ~~~~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 8 TVPVYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp CCCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred CCeeEE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCccc
Confidence 344555 999999878999999999999999999999887766688999999854
No 5
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.53 E-value=1.7e-15 Score=111.96 Aligned_cols=56 Identities=27% Similarity=0.629 Sum_probs=46.1
Q ss_pred cccCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 193 EEHGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 193 Ed~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
++.+..+| +|+++++++.+|||||.|+.|||..||+++...+ .+..|+|+.|..++
T Consensus 12 ~~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~-~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 12 VDNWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADA-LPSKFLCFRCIELS 67 (72)
T ss_dssp SCSSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSC-CCSCCCCHHHHHHC
T ss_pred CCCcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCcccc-CCCcEECCCccCCC
Confidence 34555677 9999987677999999999999999999997543 35789999998654
No 6
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=99.52 E-value=3.4e-16 Score=114.63 Aligned_cols=53 Identities=28% Similarity=0.700 Sum_probs=44.5
Q ss_pred cCcceecccCCcccCCCceEEcc-CCCCeeeccccccCccccCCC-----CeEEcCCCC
Q 025377 195 HGETLCGACGENYAADEFWICCD-VCEKWFHGKCVKITPARAEHI-----KQYKCPSCS 247 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD-~Ce~WfH~~CVgit~~~a~~i-----d~y~Cp~C~ 247 (253)
+....|++|++||+++.+||+|| .|++|||+.||||+...+..+ ..|+|+.|.
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 44567999999999899999999 999999999999998765443 389999986
No 7
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.49 E-value=1.1e-15 Score=113.83 Aligned_cols=55 Identities=40% Similarity=1.006 Sum_probs=44.5
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccC----CCCeEEcCCCCCcCC
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAE----HIKQYKCPSCSNKRA 251 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~----~id~y~Cp~C~~Kr~ 251 (253)
.+..+| +|+++++ +++|||||.|+.|||+.|||++...+. ....|+|+.|..++.
T Consensus 14 ~~~~~C-~C~~~~~-~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~ 72 (76)
T 1wem_A 14 PNALYC-ICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSG 72 (76)
T ss_dssp TTCCCS-TTCCCCC-SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSC
T ss_pred CCCCEE-ECCCccC-CCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccC
Confidence 345666 9999986 679999999999999999999986532 236899999986553
No 8
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=99.49 E-value=5e-15 Score=103.41 Aligned_cols=49 Identities=33% Similarity=0.883 Sum_probs=42.4
Q ss_pred ceecccCCcccCCCceEEcc-CCCCeeeccccccCccccCCCCeEEcCCCC
Q 025377 198 TLCGACGENYAADEFWICCD-VCEKWFHGKCVKITPARAEHIKQYKCPSCS 247 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD-~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~ 247 (253)
..|++|++||+++++||+|| .|+.|||+.|||++...+.. .+|+|+.|+
T Consensus 3 c~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~-~~~~C~~C~ 52 (52)
T 2kgg_A 3 CAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAEN-EDYICINCA 52 (52)
T ss_dssp CSCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHH-SCCCCSCC-
T ss_pred ccCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCC-CCEECCCCC
Confidence 35789999998889999999 89999999999999876533 689999995
No 9
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=99.44 E-value=2.1e-14 Score=105.76 Aligned_cols=51 Identities=27% Similarity=0.726 Sum_probs=43.1
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.+..+| +|+++++ +++|||||.|+.|||+.|||++...+ ++.|+|+.|...
T Consensus 17 ~~~~~C-iC~~~~~-~~~MIqCd~C~~WfH~~Cvgi~~~~~--~~~~~C~~C~~s 67 (68)
T 3o70_A 17 QGLVTC-FCMKPFA-GRPMIECNECHTWIHLSCAKIRKSNV--PEVFVCQKCRDS 67 (68)
T ss_dssp TTCCCS-TTCCCCT-TCCEEECTTTCCEEETTTTTCCTTSC--CSSCCCHHHHTC
T ss_pred CCceEe-ECCCcCC-CCCEEECCCCCccccccccCcCcccC--CCcEECCCCCCC
Confidence 344566 9999986 78999999999999999999998744 478999999754
No 10
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=99.43 E-value=9.2e-15 Score=115.72 Aligned_cols=54 Identities=30% Similarity=0.734 Sum_probs=46.5
Q ss_pred cceecccCCcccCCCceEEcc-CCCCeeeccccccCccccCCC-----CeEEcCCCCCcC
Q 025377 197 ETLCGACGENYAADEFWICCD-VCEKWFHGKCVKITPARAEHI-----KQYKCPSCSNKR 250 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD-~Ce~WfH~~CVgit~~~a~~i-----d~y~Cp~C~~Kr 250 (253)
...|++|+++|++++.||+|| .|++|||+.||||+...+..+ ..|+|+.|..++
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 357999999998888999998 999999999999998654333 789999998654
No 11
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=99.41 E-value=4.6e-14 Score=98.39 Aligned_cols=48 Identities=25% Similarity=0.652 Sum_probs=40.9
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
.+.|+|+++++ +++||+||.|+.|||+.|||++...+ ++.|+|+.|..
T Consensus 4 ~~~C~C~~~~~-~~~MI~Cd~C~~W~H~~Cvgi~~~~~--~~~~~C~~C~~ 51 (52)
T 3o7a_A 4 LVTCFCMKPFA-GRPMIECNECHTWIHLSCAKIRKSNV--PEVFVCQKCRD 51 (52)
T ss_dssp CBCSTTCCBCT-TCCEEECTTTCCEEETTTTTCCGGGC--CSSCCCHHHHT
T ss_pred CeEEEeCCcCC-CCCEEEcCCCCccccccccCCCcccC--CCcEECcCCCC
Confidence 34449999986 78999999999999999999998754 47899999964
No 12
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.41 E-value=3.9e-14 Score=104.79 Aligned_cols=54 Identities=35% Similarity=0.767 Sum_probs=45.0
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
.+..+|.+|+++++ +++||+||.|+.|||..||+++...++. ..|+|+.|..+.
T Consensus 16 ~~~~~C~~C~~~~~-~~~mi~CD~C~~wfH~~Cv~~~~~~~~~-~~w~C~~C~~~~ 69 (75)
T 2k16_A 16 NQIWICPGCNKPDD-GSPMIGCDDCDDWYHWPCVGIMAAPPEE-MQWFCPKCANKI 69 (75)
T ss_dssp CEEECBTTTTBCCS-SCCEEECSSSSSEEEHHHHTCSSCCCSS-SCCCCTTTHHHH
T ss_pred CCCcCCCCCCCCCC-CCCEEEcCCCCcccccccCCCCccCCCC-CCEEChhccCch
Confidence 34567989999975 6789999999999999999998876543 679999998643
No 13
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=99.39 E-value=5.5e-14 Score=102.95 Aligned_cols=53 Identities=28% Similarity=0.655 Sum_probs=42.3
Q ss_pred cceecccCCcccCCCceEEcc--CCCCeeeccccccCccccCC---CCeEEcCCCCCcCC
Q 025377 197 ETLCGACGENYAADEFWICCD--VCEKWFHGKCVKITPARAEH---IKQYKCPSCSNKRA 251 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD--~Ce~WfH~~CVgit~~~a~~---id~y~Cp~C~~Kr~ 251 (253)
..+| +|+.+++ +++||+|| .|..|||+.||||+...+.. +++|+|+.|+.+|+
T Consensus 10 ~v~C-~C~~~~~-~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~r~ 67 (68)
T 2rsd_A 10 KVRC-ICSSTMV-NDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLSRA 67 (68)
T ss_dssp EECC-TTCCCSC-CSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHHHT
T ss_pred CEEe-ECCCCcC-CCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCccc
Confidence 3556 9999865 67999999 49999999999998765433 25899999986653
No 14
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.37 E-value=4.7e-13 Score=104.10 Aligned_cols=52 Identities=33% Similarity=0.740 Sum_probs=42.3
Q ss_pred cCcceecccCCcccCCCceEEccC--CC-CeeeccccccCccccCCCCeEEcCCCCCcCCC
Q 025377 195 HGETLCGACGENYAADEFWICCDV--CE-KWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 252 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~--Ce-~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr~R 252 (253)
.+..+| +|+++++ ++||+||. |. .|||+.||+++.... .+|+|+.|..++.|
T Consensus 34 ~e~~yC-iC~~~~~--g~MI~CD~~dC~~~WfH~~CVgl~~~p~---g~W~Cp~C~~~~~k 88 (91)
T 1weu_A 34 NEPTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKPR---GKWFCPRCSQESGP 88 (91)
T ss_dssp CCCBCS-TTCCBCC--SCCCCCSCSSCSCCCCCSTTTTCSSCCC---SSCCCTTTCCCCSS
T ss_pred CCCcEE-ECCCCCC--CCEeEecCCCCCCCCEecccCCcCcCCC---CCEECcCccCcCCc
Confidence 445566 9999864 68999999 77 899999999987643 57999999987654
No 15
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.37 E-value=4.7e-13 Score=99.35 Aligned_cols=52 Identities=33% Similarity=0.740 Sum_probs=42.1
Q ss_pred cCcceecccCCcccCCCceEEccC--CC-CeeeccccccCccccCCCCeEEcCCCCCcCCC
Q 025377 195 HGETLCGACGENYAADEFWICCDV--CE-KWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 252 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~--Ce-~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr~R 252 (253)
.+..+| +|+++++ ++||+||. |. .|||+.||+++.... .+|+|+.|..++.|
T Consensus 14 ~~~~~C-~C~~~~~--g~MI~CD~~~C~~~wfH~~Cvgl~~~p~---g~w~Cp~C~~~~~k 68 (71)
T 1wen_A 14 NEPTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKPR---GKWFCPRCSQESGP 68 (71)
T ss_dssp TSCCCS-TTCCCSC--SSEECCSCSSCSCCCEETTTTTCSSCCS---SCCCCTTTSSCSSS
T ss_pred CCCCEE-ECCCCCC--CCEeEeeCCCCCCccEecccCCcCcCCC---CCEECCCCCccccc
Confidence 345667 9999864 68999999 77 799999999987653 57999999976644
No 16
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.30 E-value=1.6e-12 Score=101.43 Aligned_cols=50 Identities=34% Similarity=0.852 Sum_probs=41.8
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
.+.| +|+.+++ ++.||+||.|..|||..|++++...++ +.|+|+.|..++
T Consensus 28 ~vrC-iC~~~~~-~~~mi~Cd~C~~w~H~~C~~~~~~~~p--~~w~C~~C~~~~ 77 (98)
T 2lv9_A 28 VTRC-ICGFTHD-DGYMICCDKCSVWQHIDCMGIDRQHIP--DTYLCERCQPRN 77 (98)
T ss_dssp BCCC-TTSCCSC-SSCEEEBTTTCBEEETTTTTCCTTSCC--SSBCCTTTSSSC
T ss_pred CEEe-ECCCccC-CCcEEEcCCCCCcCcCcCCCCCccCCC--CCEECCCCcCCC
Confidence 4566 9999875 689999999999999999999876543 579999998654
No 17
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=99.28 E-value=3.2e-13 Score=113.26 Aligned_cols=54 Identities=37% Similarity=0.987 Sum_probs=46.5
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.+..+| +|+++++++++||+||.|++|||+.|+|++...+...+.|+|+.|..+
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 455677 999998878999999999999999999999877666789999999853
No 18
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.26 E-value=9e-13 Score=95.49 Aligned_cols=49 Identities=33% Similarity=0.757 Sum_probs=40.0
Q ss_pred CcceecccCCcccCCCceEEccC--CC-CeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 196 GETLCGACGENYAADEFWICCDV--CE-KWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~--Ce-~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
+..+| +|+++++ ++||+||. |. .|||+.|||++... ..+|+|+.|..+|
T Consensus 10 e~~yC-~C~~~~~--g~MI~CD~c~C~~~WfH~~Cvgl~~~p---~~~w~Cp~C~~~r 61 (62)
T 2g6q_A 10 EPTYC-LCNQVSY--GEMIGCDNEQCPIEWFHFSCVSLTYKP---KGKWYCPKCRGDN 61 (62)
T ss_dssp CCEET-TTTEECC--SEEEECSCTTCSSCEEETGGGTCSSCC---SSCCCCHHHHTCC
T ss_pred CCcEE-ECCCCCC--CCeeeeeCCCCCcccEecccCCcCcCC---CCCEECcCcccCC
Confidence 34556 9999853 68999999 55 99999999998754 3689999998765
No 19
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.26 E-value=3.4e-13 Score=131.01 Aligned_cols=53 Identities=38% Similarity=1.018 Sum_probs=46.6
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
.+..+| +|+++++.+++|||||.|+.|||+.|||++...+..++.|+|+.|..
T Consensus 35 ~~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 87 (488)
T 3kv5_D 35 PPPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAV 87 (488)
T ss_dssp CCCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHH
T ss_pred CCCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcC
Confidence 344555 99999987899999999999999999999998776678999999985
No 20
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.25 E-value=1e-12 Score=94.25 Aligned_cols=49 Identities=33% Similarity=0.781 Sum_probs=39.8
Q ss_pred CcceecccCCcccCCCceEEccC--CC-CeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 196 GETLCGACGENYAADEFWICCDV--CE-KWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~--Ce-~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
+..+| +|++++ +++||+||. |. .|||+.|||++.... .+|+|+.|..+|
T Consensus 8 e~~yC-~C~~~~--~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~---~~w~Cp~C~~~r 59 (59)
T 3c6w_A 8 EPTYC-LCHQVS--YGEMIGCDNPDCPIEWFHFACVDLTTKPK---GKWFCPRCVQEK 59 (59)
T ss_dssp CCEET-TTTEEC--CSEEEECSCTTCSSCEEETGGGTCSSCCS---SCCCCHHHHCC-
T ss_pred CCcEE-ECCCCC--CCCeeEeeCCCCCCCCEecccCCcccCCC---CCEECcCccCcC
Confidence 34556 999986 368999999 77 799999999987653 579999998765
No 21
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.25 E-value=1.1e-12 Score=94.31 Aligned_cols=49 Identities=37% Similarity=0.809 Sum_probs=38.9
Q ss_pred CcceecccCCcccCCCceEEccC--CC-CeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 196 GETLCGACGENYAADEFWICCDV--CE-KWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~--Ce-~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
+..+| +|++++ +++||+||. |. .|||+.|||++.... .+|+|+.|..+|
T Consensus 9 e~~~C-~C~~~~--~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~---g~w~C~~C~~~r 60 (60)
T 2vnf_A 9 EPTYC-LCHQVS--YGEMIGCDNPDCSIEWFHFACVGLTTKPR---GKWFCPRCSQER 60 (60)
T ss_dssp CCEET-TTTEEC--CSEEEECSCTTCSSCEEETGGGTCSSCCS---SCCCCHHHHC--
T ss_pred CCCEE-ECCCcC--CCCEEEeCCCCCCCceEehhcCCCCcCCC---CCEECcCccCcC
Confidence 34556 999986 368999999 66 899999999987653 579999998765
No 22
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.23 E-value=4.5e-13 Score=129.10 Aligned_cols=53 Identities=38% Similarity=0.969 Sum_probs=46.6
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...+| +|+++++++++|||||.|+.|||+.|||++...+..++.|+|+.|..+
T Consensus 4 ~~~yC-iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~ 56 (447)
T 3kv4_A 4 VPVYC-LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVL 56 (447)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHH
T ss_pred CCeEE-eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccc
Confidence 33455 999999778999999999999999999999988777789999999864
No 23
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=99.13 E-value=1.2e-11 Score=95.88 Aligned_cols=48 Identities=27% Similarity=0.660 Sum_probs=39.1
Q ss_pred cCcceecccCCcccCCCceEEccCCC---CeeeccccccCccccCCCCeEEcCC-CCC
Q 025377 195 HGETLCGACGENYAADEFWICCDVCE---KWFHGKCVKITPARAEHIKQYKCPS-CSN 248 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce---~WfH~~CVgit~~~a~~id~y~Cp~-C~~ 248 (253)
++..+| +|++++. ++||+||.|+ .|||+.||||+.... ..|+|+. |..
T Consensus 24 ~~~~yC-iC~~~~~--g~MI~CD~c~C~~eWfH~~CVgl~~~p~---~~W~Cp~cC~~ 75 (90)
T 2jmi_A 24 QEEVYC-FCRNVSY--GPMVACDNPACPFEWFHYGCVGLKQAPK---GKWYCSKDCKE 75 (90)
T ss_dssp CCSCCS-TTTCCCS--SSEECCCSSSCSCSCEETTTSSCSSCTT---SCCCSSHHHHH
T ss_pred CCCcEE-EeCCCCC--CCEEEecCCCCccccCcCccCCCCcCCC---CCccCChhhcc
Confidence 345566 9999864 5799999977 999999999987653 5799999 873
No 24
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=4.2e-12 Score=93.95 Aligned_cols=47 Identities=30% Similarity=0.726 Sum_probs=38.6
Q ss_pred CcceecccCCcccCCCceEEccCCC---CeeeccccccCccccCCCCeEEcCCCCC
Q 025377 196 GETLCGACGENYAADEFWICCDVCE---KWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce---~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
+..+| +|++++ +++||+||.|+ .|||+.||+++... ...|+|+.|..
T Consensus 5 ~~~yC-~C~~~~--~g~MI~CD~cdC~~~WfH~~Cvgl~~~p---~~~w~Cp~C~~ 54 (70)
T 1x4i_A 5 SSGYC-ICNQVS--YGEMVGCDNQDCPIEWFHYGCVGLTEAP---KGKWYCPQCTA 54 (70)
T ss_dssp CCCCS-TTSCCC--CSSEECCSCTTCSCCCEEHHHHTCSSCC---SSCCCCHHHHH
T ss_pred CCeEE-EcCCCC--CCCEeEeCCCCCCccCCcccccccCcCC---CCCEECCCCCc
Confidence 34556 999985 45999999975 99999999998753 46899999984
No 25
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.97 E-value=1.1e-10 Score=114.52 Aligned_cols=42 Identities=29% Similarity=0.745 Sum_probs=38.6
Q ss_pred ccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 025377 207 YAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 207 y~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
.+++.+||+||.|+.|||+.|||++...++.+++|+||.|..
T Consensus 52 ~n~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~ 93 (528)
T 3pur_A 52 KKNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVP 93 (528)
T ss_dssp TTSTTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHH
T ss_pred CCcCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcC
Confidence 346899999999999999999999999888889999999985
No 26
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.86 E-value=3.8e-10 Score=97.27 Aligned_cols=40 Identities=25% Similarity=0.791 Sum_probs=32.9
Q ss_pred ceEEccCCCCeeeccccccCccccCCC------CeEEcCCCCCcCC
Q 025377 212 FWICCDVCEKWFHGKCVKITPARAEHI------KQYKCPSCSNKRA 251 (253)
Q Consensus 212 ~mIqCD~Ce~WfH~~CVgit~~~a~~i------d~y~Cp~C~~Kr~ 251 (253)
+|||||.|+.|||+.|+|++.+.++.+ ..|+|+.|+.+..
T Consensus 20 ~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 20 KMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp CEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred CeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 499999999999999999997543332 2799999998764
No 27
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.74 E-value=4.4e-09 Score=72.23 Aligned_cols=49 Identities=29% Similarity=0.687 Sum_probs=38.9
Q ss_pred eecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 199 LCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 199 ~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.|.+|++..+ .+.||.||.|.+|||..|++......+. ..|+|+.|...
T Consensus 2 ~C~vC~~~~~-~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~-g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGE-DDKLILCDECNKAFHLFCLRPALYEVPD-GEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSC-CSCCEECTTTCCEECHHHHCTTCCSCCS-SCCSCTTTSCC
T ss_pred CCCCCCCCCC-CCCEEECCCCChhhCcccCCCCcCCCCC-CcEECcCcccc
Confidence 5889998764 5799999999999999999654333333 57999999864
No 28
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.71 E-value=7.4e-09 Score=74.21 Aligned_cols=52 Identities=25% Similarity=0.685 Sum_probs=41.4
Q ss_pred cccCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 193 EEHGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 193 Ed~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
++.++.+|.+|++. +.||.||.|..|||..|++......+. ..|+|+.|..+
T Consensus 7 ~~~~~~~C~vC~~~----g~ll~CD~C~~~fH~~Cl~p~l~~~p~-g~W~C~~C~~~ 58 (61)
T 2l5u_A 7 ETDHQDYCEVCQQG----GEIILCDTCPRAYHMVCLDPDMEKAPE-GKWSCPHCEKE 58 (61)
T ss_dssp SSCCCSSCTTTSCC----SSEEECSSSSCEEEHHHHCTTCCSCCC-SSCCCTTGGGG
T ss_pred cCCCCCCCccCCCC----CcEEECCCCChhhhhhccCCCCCCCCC-CceECcccccc
Confidence 34455689999973 589999999999999999986544433 67999999864
No 29
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.70 E-value=1.5e-09 Score=80.51 Aligned_cols=55 Identities=25% Similarity=0.654 Sum_probs=44.2
Q ss_pred CcceecccCCcc-cCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcCCCC
Q 025377 196 GETLCGACGENY-AADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 253 (253)
Q Consensus 196 ~~t~C~iC~~py-~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr~R~ 253 (253)
++..|.+|+... .+++.||.||.|..|||..|++++.. +. ..|+|+.|..+++++
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~v--P~-g~W~C~~C~~~~~~p 70 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYI--PE-GQWLCRHCLQSRARP 70 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSC--CS-SCCCCHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcC--CC-CCcCCccCcCcCccC
Confidence 445799999875 34679999999999999999998752 22 579999999877664
No 30
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.67 E-value=1.3e-08 Score=72.89 Aligned_cols=53 Identities=23% Similarity=0.700 Sum_probs=41.4
Q ss_pred ccCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcCC
Q 025377 194 EHGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKRA 251 (253)
Q Consensus 194 d~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr~ 251 (253)
|.++.+|.+|+. ++.||.||.|..+||..|++......+. ..|+|+.|..+..
T Consensus 6 d~~~~~C~vC~~----~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~-g~W~C~~C~~~~~ 58 (61)
T 1mm2_A 6 DHHMEFCRVCKD----GGELLCCDTCPSSYHIHCLNPPLPEIPN-GEWLCPRCTCPAL 58 (61)
T ss_dssp CSSCSSCTTTCC----CSSCBCCSSSCCCBCSSSSSSCCSSCCS-SCCCCTTTTTTCC
T ss_pred cCCCCcCCCCCC----CCCEEEcCCCCHHHcccccCCCcCcCCC-CccCChhhcCchh
Confidence 345667999986 3589999999999999999954443333 5799999997654
No 31
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.65 E-value=3.5e-09 Score=81.24 Aligned_cols=53 Identities=23% Similarity=0.602 Sum_probs=41.8
Q ss_pred CcceecccCCcc-cCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcCC
Q 025377 196 GETLCGACGENY-AADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKRA 251 (253)
Q Consensus 196 ~~t~C~iC~~py-~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr~ 251 (253)
++..|.+|+... .+++.||.||.|..|||..|++++.. +. ..|+|+.|..+..
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~v--P~-g~W~C~~C~~~~~ 77 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYI--PE-GQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSC--CS-SCCCCHHHHHHTT
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCcc--CC-CceECccccCccc
Confidence 346799999864 23568999999999999999998752 22 5799999986543
No 32
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.62 E-value=1e-08 Score=72.11 Aligned_cols=51 Identities=22% Similarity=0.670 Sum_probs=39.5
Q ss_pred ccCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 194 EHGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 194 d~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
+.++.+|.+|+.. +.||.||.|..|||..|++......+. ..|+|+.|..+
T Consensus 6 ~~~~~~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~ppl~~~p~-g~W~C~~C~~q 56 (56)
T 2yql_A 6 SGHEDFCSVCRKS----GQLLMCDTCSRVYHLDCLDPPLKTIPK-GMWICPRCQDQ 56 (56)
T ss_dssp CSSCCSCSSSCCS----SCCEECSSSSCEECSSSSSSCCCSCCC-SSCCCHHHHCC
T ss_pred CCCCCCCccCCCC----CeEEEcCCCCcceECccCCCCcCCCCC-CceEChhhhCc
Confidence 3455679999974 489999999999999999954433333 67999999753
No 33
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.60 E-value=1.1e-08 Score=74.23 Aligned_cols=52 Identities=27% Similarity=0.674 Sum_probs=40.4
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcCC
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKRA 251 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr~ 251 (253)
.++.+|.+|+.. +.||.||.|..|||..|++......+. ..|+|+.|..++.
T Consensus 6 ~~~~~C~vC~~~----g~ll~CD~C~~~fH~~Cl~ppl~~~P~-g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 6 KNEDECAVCRDG----GELICCDGCPRAFHLACLSPPLREIPS-GTWRCSSCLQATV 57 (66)
T ss_dssp SCCCSBSSSSCC----SSCEECSSCCCEECTTTSSSCCSSCCS-SCCCCHHHHHTCC
T ss_pred CCCCCCccCCCC----CCEEEcCCCChhhcccccCCCcCcCCC-CCeECccccCccc
Confidence 345679999964 589999999999999999954333333 6799999997554
No 34
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.58 E-value=1.6e-08 Score=78.01 Aligned_cols=52 Identities=21% Similarity=0.567 Sum_probs=40.9
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
.+...|.+|+...+ ...||.||.|..|||..|++......+. ..|+|+.|..
T Consensus 14 ~~~~~C~vC~~~~~-~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~-g~W~C~~C~~ 65 (92)
T 2e6r_A 14 IDSYICQVCSRGDE-DDKLLFCDGCDDNYHIFCLLPPLPEIPR-GIWRCPKCIL 65 (92)
T ss_dssp CCCCCCSSSCCSGG-GGGCEECTTTCCEECSSSSSSCCSSCCS-SCCCCHHHHH
T ss_pred cCCCCCccCCCcCC-CCCEEEcCCCCchhccccCCCCcccCCC-CCcCCccCcC
Confidence 34457999999764 5789999999999999999954433333 6799999975
No 35
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.52 E-value=7.9e-09 Score=73.47 Aligned_cols=50 Identities=22% Similarity=0.677 Sum_probs=39.3
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.++..|.+|+.. +.||.||.|..|||..|++......+. ..|+|+.|..+
T Consensus 3 ~~~~~C~vC~~~----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~-g~W~C~~C~~~ 52 (60)
T 2puy_A 3 IHEDFCSVCRKS----GQLLMCDTCSRVYHLDCLDPPLKTIPK-GMWICPRCQDQ 52 (60)
T ss_dssp CCCSSCTTTCCC----SSCEECSSSSCEECGGGSSSCCSSCCC-SCCCCHHHHHH
T ss_pred CCCCCCcCCCCC----CcEEEcCCCCcCEECCcCCCCcCCCCC-CceEChhccCh
Confidence 455679999974 589999999999999999954333333 57999999753
No 36
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.50 E-value=2.3e-08 Score=71.80 Aligned_cols=56 Identities=21% Similarity=0.522 Sum_probs=42.4
Q ss_pred cCcceecccCCccc-CCCceEEccCCCCeeeccccccCccc--cCCCCeEEcCCCCCcC
Q 025377 195 HGETLCGACGENYA-ADEFWICCDVCEKWFHGKCVKITPAR--AEHIKQYKCPSCSNKR 250 (253)
Q Consensus 195 ~~~t~C~iC~~py~-~d~~mIqCD~Ce~WfH~~CVgit~~~--a~~id~y~Cp~C~~Kr 250 (253)
.++..|.+|+..+. +++.||.||.|..+||..|++..... ......|+|+.|..+.
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 44567999998743 35899999999999999999975432 1112579999998654
No 37
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.47 E-value=1.1e-07 Score=69.47 Aligned_cols=50 Identities=26% Similarity=0.569 Sum_probs=38.4
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
....|.+|+.. +.||.||.|..+||..|+.......+. ..|+|+.|...+
T Consensus 11 ~~~~C~vC~~~----~~ll~Cd~C~~~~H~~Cl~P~l~~~P~-g~W~C~~C~~~~ 60 (66)
T 2lri_C 11 PGARCGVCGDG----TDVLRCTHCAAAFHWRCHFPAGTSRPG-TGLRCRSCSGDV 60 (66)
T ss_dssp TTCCCTTTSCC----TTCEECSSSCCEECHHHHCTTTCCCCS-SSCCCTTTTTCC
T ss_pred CCCCcCCCCCC----CeEEECCCCCCceecccCCCccCcCCC-CCEECccccCCC
Confidence 34569999853 569999999999999999755444333 579999998644
No 38
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.41 E-value=1.8e-07 Score=68.84 Aligned_cols=50 Identities=26% Similarity=0.646 Sum_probs=38.1
Q ss_pred eecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 199 LCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 199 ~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.|.+|++.. +++.||.||.|..+||..|++......+....|+|+.|..+
T Consensus 20 ~C~~C~~~~-~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQ-DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCS-CGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcC-CCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 466788865 36799999999999999999944333333237999999864
No 39
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.24 E-value=8.8e-07 Score=66.46 Aligned_cols=49 Identities=24% Similarity=0.644 Sum_probs=38.5
Q ss_pred eecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 025377 199 LCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 199 ~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
.|.+|++.. +++.||.||.|..+||..|++......+.-..|+|+.|..
T Consensus 28 ~C~vC~~~~-~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKH-EPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCC-CSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcC-CCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 688999875 3679999999999999999994433333322799999974
No 40
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.22 E-value=1.8e-07 Score=71.56 Aligned_cols=53 Identities=19% Similarity=0.461 Sum_probs=41.0
Q ss_pred CcceecccCCcccC-CCceEEccCCCCeeeccccccCccc----cCCCCeEEcCCCCCc
Q 025377 196 GETLCGACGENYAA-DEFWICCDVCEKWFHGKCVKITPAR----AEHIKQYKCPSCSNK 249 (253)
Q Consensus 196 ~~t~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgit~~~----a~~id~y~Cp~C~~K 249 (253)
.+..|.+|+..... ++.||.||.|...||..|.+..... .+ ...|+|+.|..+
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p-~g~W~C~~C~~~ 72 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDP-RLVWYCARCTRQ 72 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCT-TCCCCCHHHHHH
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCC-CCCeeCccccch
Confidence 45679999987543 4789999999999999999865432 22 257999999853
No 41
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.22 E-value=5.6e-07 Score=71.58 Aligned_cols=45 Identities=29% Similarity=0.687 Sum_probs=35.6
Q ss_pred CcceecccCCcccCCCceEEcc--CCCCeeeccccccCccccCCCCeEEcCCCC
Q 025377 196 GETLCGACGENYAADEFWICCD--VCEKWFHGKCVKITPARAEHIKQYKCPSCS 247 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD--~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~ 247 (253)
++.+|.+|+. ++.||.|| .|..|||..|++++... ...|+||.|.
T Consensus 14 ~~~~C~~C~~----~G~ll~CD~~~Cp~~fH~~Cl~L~~~P---~g~W~Cp~c~ 60 (107)
T 4gne_A 14 HEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLNLTQPP---YGKWECPWHQ 60 (107)
T ss_dssp SCSSCTTTCC----CSEEEECCSTTCCCEECTGGGTCSSCC---SSCCCCGGGB
T ss_pred CCCCCCcCCC----CCcEeEECCCCCCcccccccCcCCcCC---CCCEECCCCC
Confidence 3456888883 46899999 89999999999977643 2569999775
No 42
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=98.20 E-value=1.3e-06 Score=75.28 Aligned_cols=51 Identities=18% Similarity=0.427 Sum_probs=35.9
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCC---CCeEEcCCCCC
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEH---IKQYKCPSCSN 248 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~---id~y~Cp~C~~ 248 (253)
..+| .||++.+-+..|+||..|.+|||..|++........ .=.|.|..|..
T Consensus 5 ~~yC-YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~ 58 (177)
T 3rsn_A 5 AGSV-DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHH 58 (177)
T ss_dssp -------CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTST
T ss_pred eeEE-EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCC
Confidence 3466 999987778899999999999999999865433211 12789999986
No 43
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.11 E-value=3.1e-06 Score=65.32 Aligned_cols=51 Identities=22% Similarity=0.544 Sum_probs=38.8
Q ss_pred ccCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 194 EHGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 194 d~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
+.++..|.+|+.. +.+|.||.|...||..|+.......+. ..|+|+.|...
T Consensus 22 d~n~~~C~vC~~~----g~LL~CD~C~~~fH~~Cl~PpL~~~P~-g~W~C~~C~~~ 72 (88)
T 1fp0_A 22 DDSATICRVCQKP----GDLVMCNQCEFCFHLDCHLPALQDVPG-EEWSCSLCHVL 72 (88)
T ss_dssp SSSSSCCSSSCSS----SCCEECTTSSCEECTTSSSTTCCCCCS-SSCCCCSCCCC
T ss_pred CCCCCcCcCcCCC----CCEEECCCCCCceecccCCCCCCCCcC-CCcCCccccCC
Confidence 4455689999975 479999999999999999443333333 57999999854
No 44
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.08 E-value=2.2e-06 Score=64.37 Aligned_cols=49 Identities=27% Similarity=0.655 Sum_probs=37.0
Q ss_pred eecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 025377 199 LCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 199 ~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
.|.+|++..+ .+.||.||.|..+||..|++......+..+.|+|+.|++
T Consensus 28 ~C~vC~~~~d-~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSC-GGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCC-CcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 5777887653 578999999999999999995444444433499999974
No 45
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.07 E-value=2.7e-06 Score=67.13 Aligned_cols=50 Identities=22% Similarity=0.630 Sum_probs=38.3
Q ss_pred eecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 199 LCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 199 ~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.|.+|+....+++.+|.||.|..+||..|+.-.....+. ..|+|+.|+.|
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~-~~W~C~~C~~k 112 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPK-GMWICQICRPR 112 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCS-SCCCCTTTSCC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCC-CCeECCCCCCc
Confidence 677788764446789999999999999999644333333 47999999865
No 46
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=97.95 E-value=4e-06 Score=74.59 Aligned_cols=51 Identities=25% Similarity=0.630 Sum_probs=35.5
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
..|.+|+...+ ++.|+.||.|..+||..|++.+....+.-..|+|+.|...
T Consensus 175 c~C~vC~~~~~-~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 175 CACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TSCSSSCCCCC---CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCCcCCCCCCC-CCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 37999998753 6799999999999999999954443333227999999753
No 47
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.90 E-value=4e-06 Score=65.88 Aligned_cols=51 Identities=18% Similarity=0.465 Sum_probs=36.5
Q ss_pred ecccCCcccCCCceEEccCCCCeeeccccccCccc---cCCCCeEEcCCCCCcC
Q 025377 200 CGACGENYAADEFWICCDVCEKWFHGKCVKITPAR---AEHIKQYKCPSCSNKR 250 (253)
Q Consensus 200 C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~---a~~id~y~Cp~C~~Kr 250 (253)
|..|...++.+..||+|+.|+.|||..|+++..+. .+.+..|.|+.|..+.
T Consensus 62 c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 62 VDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp BCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred ccccccccccCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 44454455446779999999999999999987543 2335679999998653
No 48
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=97.88 E-value=4.6e-06 Score=65.27 Aligned_cols=51 Identities=24% Similarity=0.605 Sum_probs=39.5
Q ss_pred eecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcCC
Q 025377 199 LCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKRA 251 (253)
Q Consensus 199 ~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr~ 251 (253)
.|.+|++..+ +..||.||.|.++||..|++......+. ..|+|+.|...+.
T Consensus 56 ~C~~C~~~~~-~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~-g~W~C~~C~~c~~ 106 (111)
T 2ysm_A 56 VCQNCKQSGE-DSKMLVCDTCDKGYHTFCLQPVMKSVPT-NGWKCKNCRICIS 106 (111)
T ss_dssp CCTTTCCCSC-CTTEEECSSSCCEEEGGGSSSCCSSCCS-SCCCCHHHHCCSC
T ss_pred cccccCccCC-CCCeeECCCCCcHHhHHhcCCccccCCC-CCcCCcCCcCcCC
Confidence 5778888754 5689999999999999999854443333 5799999986543
No 49
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.83 E-value=5.3e-06 Score=65.76 Aligned_cols=48 Identities=25% Similarity=0.632 Sum_probs=37.6
Q ss_pred eecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 025377 199 LCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 199 ~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
.|.+|++..+ ++.||.||.|.++||..|++......+. ..|+|+.|..
T Consensus 60 ~C~~C~~~~~-~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~-g~W~C~~C~~ 107 (114)
T 2kwj_A 60 SCILCGTSEN-DDQLLFCDDCDRGYHMYCLNPPVAEPPE-GSWSCHLCWE 107 (114)
T ss_dssp CCTTTTCCTT-TTTEEECSSSCCEEETTTSSSCCSSCCS-SCCCCHHHHH
T ss_pred ccCcccccCC-CCceEEcCCCCccccccccCCCccCCCC-CCeECccccc
Confidence 5778888753 6789999999999999999944333333 5799999975
No 50
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=97.61 E-value=4.2e-05 Score=59.73 Aligned_cols=51 Identities=22% Similarity=0.609 Sum_probs=40.0
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCC
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCS 247 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~ 247 (253)
.++..|.+|+...+ ...||.|+.|.+.||..|+++....... ..|+|+.|.
T Consensus 5 ~~~~~C~~C~~~g~-~~~ll~C~~C~~~~H~~Cl~~~~~~~~~-~~W~C~~C~ 55 (111)
T 2ysm_A 5 SSGANCAVCDSPGD-LLDQFFCTTCGQHYHGMCLDIAVTPLKR-AGWQCPECK 55 (111)
T ss_dssp CCCSCBTTTCCCCC-TTTSEECSSSCCEECTTTTTCCCCTTTS-TTCCCTTTC
T ss_pred CCCCCCcCCCCCCC-CcCCeECCCCCCCcChHHhCCccccccc-cCccCCcCC
Confidence 34557999998743 3578999999999999999988754322 579999885
No 51
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.21 E-value=6.4e-05 Score=59.22 Aligned_cols=51 Identities=24% Similarity=0.527 Sum_probs=37.8
Q ss_pred cceecccCCcc-----cCCCceEEccCCCCeeeccccccCccccC--CCCeEEcCCCC
Q 025377 197 ETLCGACGENY-----AADEFWICCDVCEKWFHGKCVKITPARAE--HIKQYKCPSCS 247 (253)
Q Consensus 197 ~t~C~iC~~py-----~~d~~mIqCD~Ce~WfH~~CVgit~~~a~--~id~y~Cp~C~ 247 (253)
..+|.+|.... ...+.||.|+.|...||..|+++.+.... ....|+|+.|.
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 45798997653 23478999999999999999987643211 12579999995
No 52
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=96.87 E-value=0.00019 Score=56.78 Aligned_cols=50 Identities=22% Similarity=0.525 Sum_probs=36.3
Q ss_pred ceecccCCcc------cCCCceEEccCCCCeeeccccccCccccC--CCCeEEcCCCC
Q 025377 198 TLCGACGENY------AADEFWICCDVCEKWFHGKCVKITPARAE--HIKQYKCPSCS 247 (253)
Q Consensus 198 t~C~iC~~py------~~d~~mIqCD~Ce~WfH~~CVgit~~~a~--~id~y~Cp~C~ 247 (253)
.+|.+|.... .+.+.+|.|+.|...||..|++++..... ....|+|+.|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 4688897654 22479999999999999999998743211 11469888874
No 53
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=96.84 E-value=0.00047 Score=57.26 Aligned_cols=52 Identities=29% Similarity=0.655 Sum_probs=39.4
Q ss_pred ccCcceecccCCcccCCCceEEccCCCCeeeccccccCccc-----c-CCCCeEEcCCCCCc
Q 025377 194 EHGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPAR-----A-EHIKQYKCPSCSNK 249 (253)
Q Consensus 194 d~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~-----a-~~id~y~Cp~C~~K 249 (253)
|..+.+|.+|+. ++..|.||.|.+-||..|+...-.. . ...+.|.|+.|..+
T Consensus 60 Dg~~d~C~vC~~----GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 60 DGMDEQCRWCAE----GGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TSCBCSCSSSCC----CSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCeecccCC----CCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 455678999996 4689999999999999999843321 1 12367999999864
No 54
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=96.46 E-value=0.001 Score=54.46 Aligned_cols=52 Identities=27% Similarity=0.628 Sum_probs=38.8
Q ss_pred ccCcceecccCCcccCCCceEEccCCCCeeeccccccC-----cccc-CCCCeEEcCCCCCc
Q 025377 194 EHGETLCGACGENYAADEFWICCDVCEKWFHGKCVKIT-----PARA-EHIKQYKCPSCSNK 249 (253)
Q Consensus 194 d~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit-----~~~a-~~id~y~Cp~C~~K 249 (253)
|..+.+|.+|+. ++..|.||.|.+-||..|+... ...+ ...+.|.|..|..+
T Consensus 54 Dg~~~~C~vC~d----GG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 54 DGMDEQCRWCAE----GGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp TSCBSSCTTTCC----CSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCCcCeecCC----CCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 455567999985 4789999999999999999743 1111 12367999999864
No 55
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=93.48 E-value=0.06 Score=35.55 Aligned_cols=47 Identities=23% Similarity=0.464 Sum_probs=34.4
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
..|.+|...+..+...+....|...||..|+.--.. ....||.|+..
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~-----~~~~CP~Cr~~ 52 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLG-----SHSTCPLCRLT 52 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTT-----TCCSCSSSCCC
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHHHH-----cCCcCcCCCCE
Confidence 359999988766555666667999999999964322 13579999854
No 56
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=93.05 E-value=0.062 Score=37.19 Aligned_cols=48 Identities=27% Similarity=0.429 Sum_probs=31.9
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
....|.+|...+..+.. +..-.|...||..|+.--... ...||.|+..
T Consensus 13 ~~~~C~IC~~~~~~~~~-~~~~~C~H~fc~~Ci~~~~~~-----~~~CP~Cr~~ 60 (69)
T 2kiz_A 13 TEEKCTICLSILEEGED-VRRLPCMHLFHQVCVDQWLIT-----NKKCPICRVD 60 (69)
T ss_dssp CCCSBTTTTBCCCSSSC-EEECTTSCEEEHHHHHHHHHH-----CSBCTTTCSB
T ss_pred CCCCCeeCCccccCCCc-EEEeCCCCHHHHHHHHHHHHc-----CCCCcCcCcc
Confidence 34569999887753333 334469999999999643221 1359999864
No 57
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=91.63 E-value=0.18 Score=35.65 Aligned_cols=47 Identities=28% Similarity=0.556 Sum_probs=31.4
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|.+|...+......+. -.|...||..|+.--.. ....||.|+..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~-~~C~H~fc~~Ci~~~~~-----~~~~CP~Cr~~ 61 (78)
T 2ect_A 15 GLECPVCKEDYALGESVRQ-LPCNHLFHDSCIVPWLE-----QHDSCPVCRKS 61 (78)
T ss_dssp SCCCTTTTSCCCTTSCEEE-CTTSCEEETTTTHHHHT-----TTCSCTTTCCC
T ss_pred CCCCeeCCccccCCCCEEE-eCCCCeecHHHHHHHHH-----cCCcCcCcCCc
Confidence 4469999988764433222 25888999999963322 12579999864
No 58
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=91.27 E-value=0.1 Score=34.25 Aligned_cols=47 Identities=23% Similarity=0.514 Sum_probs=34.2
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
..|.+|...+......+..-.|...||..|+.--... ...||.|+..
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~ 52 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE-----GYRCPLCSGP 52 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHH-----TCCCTTSCCS
T ss_pred CcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHc-----CCcCCCCCCc
Confidence 4599999887554555666779999999999643322 1679999864
No 59
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=90.52 E-value=0.16 Score=37.50 Aligned_cols=48 Identities=29% Similarity=0.585 Sum_probs=32.7
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.+..|.+|...+..+...+. -.|...||..|+.---. ....||.|+..
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~-l~C~H~Fh~~Ci~~wl~-----~~~~CP~Cr~~ 86 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATE-LPCHHYFHKPCVSIWLQ-----KSGTCPVCRCM 86 (91)
T ss_dssp SCSEETTTTEECCTTCEEEE-ETTTEEEEHHHHHHHHT-----TTCBCTTTCCB
T ss_pred CCCCCcccChhhcCCCcEEe-cCCCChHHHHHHHHHHH-----cCCcCcCcCcc
Confidence 44579999987754444433 34999999999864221 12589999864
No 60
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=90.17 E-value=0.1 Score=40.21 Aligned_cols=50 Identities=26% Similarity=0.635 Sum_probs=36.6
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccC---cc--------ccCCCCeEEcCCCCC
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKIT---PA--------RAEHIKQYKCPSCSN 248 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit---~~--------~a~~id~y~Cp~C~~ 248 (253)
+..|.+|..-. .+.++.|..|.+-||..|..-. .. .|....-|.|+.|..
T Consensus 15 D~~C~VC~~~t--~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 15 DEMCDVCEVWT--AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp SCCCTTTCCCC--SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CcccCcccccc--ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 34699999752 5789999999999999998531 11 122235799999975
No 61
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.28 E-value=0.22 Score=34.78 Aligned_cols=46 Identities=28% Similarity=0.626 Sum_probs=31.4
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
..|.+|...+......+.. .|...||..|+.--... ...||.|+..
T Consensus 16 ~~C~IC~~~~~~~~~~~~~-~C~H~f~~~Ci~~~~~~-----~~~CP~Cr~~ 61 (74)
T 2ep4_A 16 ELCAVCLEDFKPRDELGIC-PCKHAFHRKCLIKWLEV-----RKVCPLCNMP 61 (74)
T ss_dssp CBCSSSCCBCCSSSCEEEE-TTTEEEEHHHHHHHHHH-----CSBCTTTCCB
T ss_pred CCCcCCCcccCCCCcEEEc-CCCCEecHHHHHHHHHc-----CCcCCCcCcc
Confidence 3599999887654444433 58999999998643221 1379999864
No 62
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=88.71 E-value=0.18 Score=38.22 Aligned_cols=50 Identities=24% Similarity=0.398 Sum_probs=31.7
Q ss_pred eecccCCcccCCC--------------ceEEccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 025377 199 LCGACGENYAADE--------------FWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 199 ~C~iC~~py~~d~--------------~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
.|+||...+.... ..+.--.|...||..|+.--...........||.|+.
T Consensus 27 ~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~ 90 (114)
T 1v87_A 27 DCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKT 90 (114)
T ss_dssp EETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCC
T ss_pred cCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCC
Confidence 5999987653321 2344567999999999863221111113578999985
No 63
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.01 E-value=0.29 Score=36.09 Aligned_cols=48 Identities=17% Similarity=0.380 Sum_probs=31.9
Q ss_pred ceecccCCcccCCCceEE---ccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 025377 198 TLCGACGENYAADEFWIC---CDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIq---CD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
..|.||...+..++.+|. |.....+||..|+.-=-... ....||.|+.
T Consensus 16 ~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~---~~~~CplCr~ 66 (80)
T 2d8s_A 16 DICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSS---DTRCCELCKY 66 (80)
T ss_dssp CCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHH---CCSBCSSSCC
T ss_pred CCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhC---CCCCCCCCCC
Confidence 359999987766666763 22334999999995322111 2368999985
No 64
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=87.68 E-value=0.4 Score=35.05 Aligned_cols=33 Identities=24% Similarity=0.579 Sum_probs=21.3
Q ss_pred CCceEEcc--CCCCeeeccccccCccccCCCCeEEcCC
Q 025377 210 DEFWICCD--VCEKWFHGKCVKITPARAEHIKQYKCPS 245 (253)
Q Consensus 210 d~~mIqCD--~Ce~WfH~~CVgit~~~a~~id~y~Cp~ 245 (253)
...||||| .|.+|=-.. .++... ...+.|+|..
T Consensus 15 ~~~WVQCd~p~C~KWR~LP-~~~~~~--~lpd~W~C~m 49 (69)
T 2e61_A 15 CLVWVQCSFPNCGKWRRLC-GNIDPS--VLPDNWSCDQ 49 (69)
T ss_dssp CCCEEECSSTTTCCEEECC-SSCCTT--TSCTTCCGGG
T ss_pred CCeEEEeCccccCcccCCc-cccccc--cCCCcCEeCC
Confidence 46899999 999996552 122211 1346799964
No 65
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.57 E-value=0.19 Score=35.41 Aligned_cols=47 Identities=28% Similarity=0.574 Sum_probs=32.1
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|.+|...+... ..+..-.|..-||..|+.---.. ...||.|+..
T Consensus 23 ~~~C~IC~~~~~~~-~~~~~l~C~H~fh~~Ci~~w~~~-----~~~CP~Cr~~ 69 (75)
T 1x4j_A 23 QTLCVVCMCDFESR-QLLRVLPCNHEFHAKCVDKWLKA-----NRTCPICRAD 69 (75)
T ss_dssp CCEETTTTEECCBT-CEEEEETTTEEEETTHHHHHHHH-----CSSCTTTCCC
T ss_pred CCCCeECCcccCCC-CeEEEECCCCHhHHHHHHHHHHc-----CCcCcCcCCc
Confidence 35699999877543 34444468999999998643221 2479999864
No 66
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=86.57 E-value=0.32 Score=38.16 Aligned_cols=35 Identities=20% Similarity=0.608 Sum_probs=23.2
Q ss_pred CCCceEEccCCCCeeeccccccCccccCCCCeEEcCC
Q 025377 209 ADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPS 245 (253)
Q Consensus 209 ~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~ 245 (253)
....|||||.|.+|=-.. .++... ....+.|+|..
T Consensus 24 ~~~~WVQCD~C~KWRrLP-~~~~~~-~~~pd~W~C~m 58 (100)
T 2l7p_A 24 TESAWVRCDDCFKWRRIP-ASVVGS-IDESSRWICMN 58 (100)
T ss_dssp SSSEEEECTTTCCEEEEC-HHHHTT-STTSSCCCGGG
T ss_pred CCCeEEeeCCCCccccCC-hhHccc-cCCCCCceeCC
Confidence 467999999999997664 222211 12347899965
No 67
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.34 E-value=0.56 Score=33.42 Aligned_cols=50 Identities=22% Similarity=0.466 Sum_probs=33.6
Q ss_pred cceecccCCcccCCCc-eEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEF-WICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~-mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|.+|...+..... .+.- .|+..||..|+.--.... .....||.|+..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~--~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLL-HCGHTICRQCLEKLLASS--INGVRCPFCSKI 65 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEEC-SSSCEEEHHHHHHHHHHC--SSCBCCTTTCCC
T ss_pred CCCCccCCccccccCCCeEEC-CCCChhhHHHHHHHHHcC--CCCcCCCCCCCc
Confidence 3569999998765432 3333 699999999986432221 135789999863
No 68
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.84 E-value=0.68 Score=32.93 Aligned_cols=46 Identities=15% Similarity=0.359 Sum_probs=31.8
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.....|.+|...+.. ..+ -.|...||..|+.--... ...||.|+..
T Consensus 13 ~~~~~C~IC~~~~~~--p~~--~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~~ 58 (81)
T 2csy_A 13 EIPFRCFICRQAFQN--PVV--TKCRHYFCESCALEHFRA-----TPRCYICDQP 58 (81)
T ss_dssp CCCSBCSSSCSBCCS--EEE--CTTSCEEEHHHHHHHHHH-----CSBCSSSCCB
T ss_pred CCCCCCcCCCchhcC--eeE--ccCCCHhHHHHHHHHHHC-----CCcCCCcCcc
Confidence 345679999987642 222 479999999998543321 3589999864
No 69
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=81.31 E-value=0.46 Score=40.08 Aligned_cols=54 Identities=20% Similarity=0.499 Sum_probs=39.9
Q ss_pred cccCcceecccCCcccCCCceEEcc--CCCCeeeccccccCcc-----ccCCCCeEEcCCCCCcC
Q 025377 193 EEHGETLCGACGENYAADEFWICCD--VCEKWFHGKCVKITPA-----RAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 193 Ed~~~t~C~iC~~py~~d~~mIqCD--~Ce~WfH~~CVgit~~-----~a~~id~y~Cp~C~~Kr 250 (253)
+|.-+.+|-+|+. ++.+|.|| .|.+-|-..|+...-. .+...+.|.|-.|..+.
T Consensus 75 eDG~~~yC~wC~~----Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 75 DDGYQSYCTICCG----GREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp TTSSBSSCTTTSC----CSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CCCCcceeeEecC----CCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 4455668999985 57999999 8999999999854211 12234789999998653
No 70
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=80.46 E-value=1.3 Score=31.05 Aligned_cols=48 Identities=19% Similarity=0.547 Sum_probs=32.3
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
....|++|...+. .-+.-..|...||..|+.--.... ....||.|+..
T Consensus 14 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~---~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMT---DAVVIPCCGNSYCDECIRTALLES---DEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCT---TCEECSSSCCEECTTHHHHHHHHS---SSSCCSSSCCS
T ss_pred CCCCCcCCChHHh---CCeEcCCCCCHHHHHHHHHHHHhc---CCCcCCCCCCc
Confidence 3456999988764 233334499999999986433221 23689999975
No 71
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=79.65 E-value=1.4 Score=29.44 Aligned_cols=43 Identities=16% Similarity=0.430 Sum_probs=29.5
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.+...|.+|...+... ..+ .|..-|+..|+.- ....||.|+..
T Consensus 4 ~~~~~C~IC~~~~~~p-~~l---~CgH~fC~~Ci~~--------~~~~CP~Cr~~ 46 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCP-KLL---PCLHTLCSGCLEA--------SGMQCPICQAP 46 (56)
T ss_dssp CCCSSCSSSCSSCBCC-SCS---TTSCCSBTTTCSS--------SSSSCSSCCSS
T ss_pred ccCCCceEeCCccCCe-EEc---CCCCcccHHHHcc--------CCCCCCcCCcE
Confidence 3445699999877532 222 4777899999755 13679999864
No 72
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=78.92 E-value=1.7 Score=30.20 Aligned_cols=49 Identities=18% Similarity=0.438 Sum_probs=31.6
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccc--cCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPAR--AEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~--a~~id~y~Cp~C~~K 249 (253)
...|++|...+.+. ..+ .|+..||..|+.---.. ........||.|+..
T Consensus 12 ~~~C~IC~~~~~~p-~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~ 62 (79)
T 2egp_A 12 EVTCPICLELLTEP-LSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGIS 62 (79)
T ss_dssp CCEETTTTEECSSC-CCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCC
T ss_pred CCCCcCCCcccCCe-eEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCc
Confidence 45699999876532 222 68889999998643221 111235789999864
No 73
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=78.46 E-value=0.49 Score=44.90 Aligned_cols=54 Identities=17% Similarity=0.506 Sum_probs=40.0
Q ss_pred cccCcceecccCCcccCCCceEEcc--CCCCeeeccccccCc--c---ccCCCCeEEcCCCCCcC
Q 025377 193 EEHGETLCGACGENYAADEFWICCD--VCEKWFHGKCVKITP--A---RAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 193 Ed~~~t~C~iC~~py~~d~~mIqCD--~Ce~WfH~~CVgit~--~---~a~~id~y~Cp~C~~Kr 250 (253)
+|..+.+|-+|+. ++..|.|| .|.+-|-..|+...- . .+...+.|.|-.|..+.
T Consensus 89 ~DG~~~yCr~C~~----Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 89 DDGYQSYCSICCS----GETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SSSSBCSCTTTCC----CSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CCCCcccceEcCC----CCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 4455678999986 46899999 999999999986432 1 12224789999998653
No 74
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.93 E-value=1.1 Score=31.13 Aligned_cols=43 Identities=21% Similarity=0.413 Sum_probs=29.3
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
..|.+|...+.. .+.- .|...||..|+.--.. ....||.|+..
T Consensus 16 ~~C~IC~~~~~~---~~~~-~CgH~fC~~Ci~~~~~-----~~~~CP~Cr~~ 58 (71)
T 2d8t_A 16 PECAICLQTCVH---PVSL-PCKHVFCYLCVKGASW-----LGKRCALCRQE 58 (71)
T ss_dssp CBCSSSSSBCSS---EEEE-TTTEEEEHHHHHHCTT-----CSSBCSSSCCB
T ss_pred CCCccCCcccCC---CEEc-cCCCHHHHHHHHHHHH-----CCCcCcCcCch
Confidence 469999987642 2222 5888999999864322 12689999864
No 75
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=76.73 E-value=1.5 Score=32.91 Aligned_cols=33 Identities=24% Similarity=0.456 Sum_probs=25.9
Q ss_pred cCcceecccCCcccCCCceEEcc--CCCCeeeccccc
Q 025377 195 HGETLCGACGENYAADEFWICCD--VCEKWFHGKCVK 229 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD--~Ce~WfH~~CVg 229 (253)
-+...|.+|++. ..+--|||. .|...||..|..
T Consensus 15 R~~l~C~iC~~~--~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 15 RWKLTCYLCKQK--GVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCCCBTTTTBC--CSSCEEECSCTTTCCEEEHHHHH
T ss_pred HhcCCCcCCCCC--CCcEeEecCCCCCCCcCcHHHHH
Confidence 345679999875 236889998 599999999963
No 76
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.64 E-value=0.6 Score=33.74 Aligned_cols=45 Identities=20% Similarity=0.628 Sum_probs=28.6
Q ss_pred ecccCCccc-----------CCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 200 CGACGENYA-----------ADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 200 C~iC~~py~-----------~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
|.+|...+. .++..+.--.|..-||..|+.-=-.. .-.||.|+..
T Consensus 18 C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~-----~~~CP~CR~~ 73 (81)
T 2ecl_A 18 CAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQ-----NNRCPLCQQD 73 (81)
T ss_dssp BTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTT-----CCBCTTTCCB
T ss_pred CcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHh-----CCCCCCcCCC
Confidence 666666543 23334444479999999998632211 2389999864
No 77
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.20 E-value=0.82 Score=30.92 Aligned_cols=49 Identities=22% Similarity=0.546 Sum_probs=32.7
Q ss_pred cceecccCCcccCC---CceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 197 ETLCGACGENYAAD---EFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 197 ~t~C~iC~~py~~d---~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
...|.+|...+... ...+.--.|...||..|+.--... ...||.|+..-
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~~ 66 (69)
T 2ea6_A 15 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRKKI 66 (69)
T ss_dssp CCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH-----CSSCTTTCCCC
T ss_pred CCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc-----CCCCCCCCCcc
Confidence 34599999876431 234445678899999999643221 24799998654
No 78
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.97 E-value=1.7 Score=29.79 Aligned_cols=48 Identities=23% Similarity=0.457 Sum_probs=32.1
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
...|.+|...+. ...+ - .|...||..|+.--... ......||.|+..-
T Consensus 20 ~~~C~IC~~~~~--~~~~-~-~CgH~fC~~Ci~~~~~~--~~~~~~CP~Cr~~~ 67 (73)
T 2ysl_A 20 EVICPICLDILQ--KPVT-I-DCGHNFCLKCITQIGET--SCGFFKCPLCKTSV 67 (73)
T ss_dssp CCBCTTTCSBCS--SEEE-C-TTCCEEEHHHHHHHCSS--SCSCCCCSSSCCCC
T ss_pred CCEeccCCcccC--CeEE-c-CCCChhhHHHHHHHHHc--CCCCCCCCCCCCcC
Confidence 356999998764 2222 2 79999999999643221 11357899998643
No 79
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.26 E-value=2.7 Score=27.41 Aligned_cols=44 Identities=25% Similarity=0.545 Sum_probs=28.5
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCC
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSC 246 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C 246 (253)
...|.+|...+... ..+ .|...||..|+.--.... .....||.|
T Consensus 15 ~~~C~IC~~~~~~p-~~~---~CgH~fC~~Ci~~~~~~~--~~~~~CP~C 58 (58)
T 2ecj_A 15 EASCSVCLEYLKEP-VII---ECGHNFCKACITRWWEDL--ERDFPCPVC 58 (58)
T ss_dssp CCBCSSSCCBCSSC-CCC---SSCCCCCHHHHHHHTTSS--CCSCCCSCC
T ss_pred CCCCccCCcccCcc-EeC---CCCCccCHHHHHHHHHhc--CCCCCCCCC
Confidence 35699999877532 222 688889999986432111 134688887
No 80
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=70.06 E-value=2.1 Score=33.02 Aligned_cols=46 Identities=22% Similarity=0.427 Sum_probs=29.9
Q ss_pred eecccCCcccCC--------------CceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 199 LCGACGENYAAD--------------EFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 199 ~C~iC~~py~~d--------------~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.|.||...+... +-.+.--.|..-||..|+.-=-. ....||.|+..
T Consensus 39 ~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~-----~~~~CP~Cr~~ 98 (106)
T 3dpl_R 39 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK-----TRQVCPLDNRE 98 (106)
T ss_dssp CCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHT-----TCSBCSSSCSB
T ss_pred CCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHH-----cCCcCcCCCCc
Confidence 499998765421 11233347999999999853221 13679999864
No 81
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=69.36 E-value=1.6 Score=31.73 Aligned_cols=48 Identities=21% Similarity=0.431 Sum_probs=31.7
Q ss_pred cceecccCCcccC-CCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAA-DEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
+..|++|..+... +-....| .|+.-|+..|..-.... ..+.||.|+..
T Consensus 11 ~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~~----~~~~CP~CR~~ 59 (78)
T 1e4u_A 11 PVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRTD----ENGLCPACRKP 59 (78)
T ss_dssp CCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTTS----SCSBCTTTCCB
T ss_pred CCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHhc----CCCCCCCCCCc
Confidence 3569999987742 2223334 68888999998543221 35899999963
No 82
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=69.10 E-value=1.9 Score=34.76 Aligned_cols=47 Identities=21% Similarity=0.524 Sum_probs=33.8
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
....|++|...+. .-+.+-.|+..||..|+.---.. ....||.|+..
T Consensus 53 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 99 (165)
T 2ckl_B 53 SELMCPICLDMLK---NTMTTKECLHRFCADCIITALRS----GNKECPTCRKK 99 (165)
T ss_dssp HHHBCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHHT----TCCBCTTTCCB
T ss_pred CCCCCcccChHhh---CcCEeCCCCChhHHHHHHHHHHh----CcCCCCCCCCc
Confidence 3457999988764 34566689999999998643321 24789999864
No 83
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.87 E-value=2.3 Score=28.90 Aligned_cols=45 Identities=18% Similarity=0.411 Sum_probs=30.9
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|.+|...+... .. -.|+..||..|+.--... ....||.|+..
T Consensus 15 ~~~C~IC~~~~~~p-~~---~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 59 (66)
T 2ecy_A 15 KYKCEKCHLVLCSP-KQ---TECGHRFCESCMAALLSS----SSPKCTACQES 59 (66)
T ss_dssp CEECTTTCCEESSC-CC---CSSSCCCCHHHHHHHHTT----SSCCCTTTCCC
T ss_pred CCCCCCCChHhcCe-eE---CCCCCHHHHHHHHHHHHh----CcCCCCCCCcC
Confidence 45699999876532 22 378889999998643321 24679999865
No 84
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=68.22 E-value=1.9 Score=32.13 Aligned_cols=46 Identities=22% Similarity=0.410 Sum_probs=34.2
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|++|...+. .-+.|-.|+.-||..|+.---.. ....||.|+..
T Consensus 22 ~~~C~IC~~~~~---~p~~~~~CgH~FC~~Ci~~~~~~----~~~~CP~Cr~~ 67 (100)
T 3lrq_A 22 VFRCFICMEKLR---DARLCPHCSKLCCFSCIRRWLTE----QRAQCPHCRAP 67 (100)
T ss_dssp HTBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHHH----TCSBCTTTCCB
T ss_pred CCCCccCCcccc---CccccCCCCChhhHHHHHHHHHH----CcCCCCCCCCc
Confidence 356999998764 46788899999999999643222 12689999864
No 85
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=67.33 E-value=5.3 Score=37.85 Aligned_cols=54 Identities=22% Similarity=0.412 Sum_probs=34.9
Q ss_pred CcceecccCCcccCCCc--eEEcc--CCCCeeecccccc-----Cc-cccCCCCeEEcCCCCCc
Q 025377 196 GETLCGACGENYAADEF--WICCD--VCEKWFHGKCVKI-----TP-ARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~--mIqCD--~Ce~WfH~~CVgi-----t~-~~a~~id~y~Cp~C~~K 249 (253)
+...|+||-....+++. -..|+ .|..=||..|+-- .. ...=.+-.-.||.|+.+
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 44569999765544232 35698 9999999999832 11 11122345789999864
No 86
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.82 E-value=2.2 Score=29.75 Aligned_cols=48 Identities=19% Similarity=0.435 Sum_probs=30.7
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCcccc-CCCCeEEcCCCCCc
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARA-EHIKQYKCPSCSNK 249 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a-~~id~y~Cp~C~~K 249 (253)
..|.+|...+... ..+ .|...||..|+..-.... .......||.|+..
T Consensus 20 ~~C~IC~~~~~~p-~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecv_A 20 VTCPICLELLTQP-LSL---DCGHSFCQACLTANHKKSMLDKGESSCPVCRIS 68 (85)
T ss_dssp CCCTTTCSCCSSC-BCC---SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCS
T ss_pred CCCCCCCcccCCc-eeC---CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCc
Confidence 4699999876532 222 688899999986422110 01125789999864
No 87
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=65.40 E-value=1.4 Score=29.25 Aligned_cols=47 Identities=23% Similarity=0.629 Sum_probs=31.8
Q ss_pred ceecccCCcccC---CCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 198 TLCGACGENYAA---DEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 198 t~C~iC~~py~~---d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
..|++|...+.. ....+..-.|+..||..|+.--... ...||.|+..
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~ 53 (64)
T 2xeu_A 4 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRKK 53 (64)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH-----CSBCTTTCCB
T ss_pred CCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc-----CCCCCCCCcc
Confidence 469999886643 2234445588999999999643221 2489999864
No 88
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=64.96 E-value=2.2 Score=30.70 Aligned_cols=54 Identities=22% Similarity=0.510 Sum_probs=40.9
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
+...|.+|.+..-.++.=--|-.|..-|-..|-|-..-... -..|.|..|.++.
T Consensus 8 d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~lr~~-k~~WvC~lC~k~q 61 (62)
T 2a20_A 8 DAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSN-KVMWVCNLCRKQQ 61 (62)
T ss_dssp CCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEESSTT-CEEEEEHHHHHHT
T ss_pred CcchhhhhccceeccCCCccccccCCeeecccCCEeeecCC-eEEEEehhhhhcc
Confidence 34579999997666777778999999999999875544332 2579999998653
No 89
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.77 E-value=2.8 Score=29.01 Aligned_cols=45 Identities=20% Similarity=0.392 Sum_probs=31.2
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|.+|...+.+ -+.-..|..-||..|+.--... ...||.|+..
T Consensus 15 ~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~~ 59 (72)
T 2djb_A 15 YILCSICKGYLID---ATTITECLHTFCKSCIVRHFYY-----SNRCPKCNIV 59 (72)
T ss_dssp GGSCTTTSSCCSS---CEECSSSCCEECHHHHHHHHHH-----CSSCTTTCCC
T ss_pred CCCCCCCChHHHC---cCEECCCCCHHHHHHHHHHHHc-----CCcCCCcCcc
Confidence 4569999887642 3444578889999998543321 3679999863
No 90
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.77 E-value=2.8 Score=28.08 Aligned_cols=44 Identities=25% Similarity=0.496 Sum_probs=28.8
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCC
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSC 246 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C 246 (253)
...|++|...+.+ ..+ - .|...||..|+.--... ......||.|
T Consensus 20 ~~~C~IC~~~~~~--p~~-~-~CgH~fC~~Ci~~~~~~--~~~~~~CP~C 63 (63)
T 2ysj_A 20 EVICPICLDILQK--PVT-I-DCGHNFCLKCITQIGET--SCGFFKCPLC 63 (63)
T ss_dssp CCBCTTTCSBCSS--CEE-C-TTSSEECHHHHHHHHHH--CSSCCCCSCC
T ss_pred CCCCCcCCchhCC--eEE-e-CCCCcchHHHHHHHHHc--CCCCCcCcCC
Confidence 3569999987642 222 2 79999999998643321 1134679887
No 91
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=62.53 E-value=1.2 Score=30.42 Aligned_cols=47 Identities=23% Similarity=0.629 Sum_probs=32.1
Q ss_pred ceecccCCcccC---CCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 198 TLCGACGENYAA---DEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 198 t~C~iC~~py~~---d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
..|.+|...+.. ++..+..-.|+.-||..|+.--... ...||.|+..
T Consensus 11 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~ 60 (71)
T 3ng2_A 11 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRKK 60 (71)
T ss_dssp CBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHH-----CSBCTTTCCB
T ss_pred CCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHc-----CCCCCCCCCc
Confidence 459999987643 2344455689999999999633221 2489999864
No 92
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=61.49 E-value=5 Score=30.04 Aligned_cols=36 Identities=25% Similarity=0.558 Sum_probs=29.6
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCcccc
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARA 235 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a 235 (253)
..|-+|+.. ..++.-.|..|+.-.|..|+..++...
T Consensus 48 ~~C~~C~~~--~~~~~Y~C~~C~f~lH~~Ca~~p~~~~ 83 (89)
T 1v5n_A 48 YTCDKCEEE--GTIWSYHCDECDFDLHAKCALNEDTKE 83 (89)
T ss_dssp CCCTTTSCC--CCSCEEECTTTCCCCCHHHHHCSSCSS
T ss_pred eEeCCCCCc--CCCcEEEcCCCCCeEcHHhcCCCCccc
Confidence 469999986 356778999999999999998876653
No 93
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=61.46 E-value=3.9 Score=29.37 Aligned_cols=49 Identities=18% Similarity=0.566 Sum_probs=32.2
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.....|++|...+.+ . +.-..|+.-|+..|+.---... ....||.|+..
T Consensus 11 ~~~~~C~IC~~~~~~--p-~~~~~CgH~fC~~Ci~~~~~~~---~~~~CP~Cr~~ 59 (92)
T 3ztg_A 11 PDELLCLICKDIMTD--A-VVIPCCGNSYCDECIRTALLES---DEHTCPTCHQN 59 (92)
T ss_dssp CTTTEETTTTEECSS--C-EECTTTCCEECHHHHHHHHHHC---TTCCCTTTCCS
T ss_pred CcCCCCCCCChhhcC--c-eECCCCCCHHHHHHHHHHHHhc---CCCcCcCCCCc
Confidence 345679999987642 2 2333489899999985332211 23789999865
No 94
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=59.40 E-value=3.1 Score=33.72 Aligned_cols=53 Identities=25% Similarity=0.488 Sum_probs=39.2
Q ss_pred CcceecccCCccc-CCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 196 GETLCGACGENYA-ADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 196 ~~t~C~iC~~py~-~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
+...|.+|+++.. .+..-..|-.|..=+-.+|.+..... .....|+|..|.+.
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~-~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNN-RPHPVWLCKICLEQ 107 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCS-SSSCCEEEHHHHHH
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCCccCCC-CCccceechhhHHH
Confidence 4467999999874 24556899999999999998876432 12256999999754
No 95
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=59.14 E-value=2.3 Score=33.63 Aligned_cols=46 Identities=22% Similarity=0.427 Sum_probs=0.0
Q ss_pred eecccCCcccCC--------------CceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 199 LCGACGENYAAD--------------EFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 199 ~C~iC~~py~~d--------------~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
.|.||...+... +..|.--.|...||..|+.-=-. ..-.||.|+..
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~-----~~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK-----TRQVCPLDNRE 109 (117)
T ss_dssp -----------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHH-----cCCcCCCCCCe
Confidence 599998776421 11222236889999999853221 13579999863
No 96
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=58.66 E-value=4.8 Score=28.00 Aligned_cols=46 Identities=11% Similarity=0.089 Sum_probs=31.7
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
....|++|..... ...+. .|+..|+..|+.---.. ....||.|+..
T Consensus 7 ~~~~C~IC~~~~~--~Pv~~--~CgH~fc~~Ci~~~~~~----~~~~CP~C~~~ 52 (78)
T 1t1h_A 7 EYFRCPISLELMK--DPVIV--STGQTYERSSIQKWLDA----GHKTCPKSQET 52 (78)
T ss_dssp SSSSCTTTSCCCS--SEEEE--TTTEEEEHHHHHHHHTT----TCCBCTTTCCB
T ss_pred ccCCCCCcccccc--CCEEc--CCCCeecHHHHHHHHHH----CcCCCCCCcCC
Confidence 3467999998764 23332 69999999998543221 24789999864
No 97
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=58.15 E-value=3.8 Score=28.46 Aligned_cols=48 Identities=19% Similarity=0.386 Sum_probs=30.9
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCcccc-CCCCeEEcCCCCCc
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARA-EHIKQYKCPSCSNK 249 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a-~~id~y~Cp~C~~K 249 (253)
..|.+|...+.. .. .. .|...||..|+.--.... .......||.|+..
T Consensus 20 ~~C~IC~~~~~~--p~-~~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecw_A 20 VTCPICLELLKE--PV-SA-DCNHSFCRACITLNYESNRNTDGKGNCPVCRVP 68 (85)
T ss_dssp TSCTTTCSCCSS--CE-EC-TTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCC
T ss_pred CCCcCCChhhCc--ce-eC-CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCc
Confidence 469999987642 22 22 588899999986422211 11235899999864
No 98
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=56.73 E-value=4.7 Score=30.06 Aligned_cols=45 Identities=20% Similarity=0.405 Sum_probs=32.0
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|++|...+. .-+....|+..||..|+.---.. ...||.|+..
T Consensus 15 ~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~~ 59 (108)
T 2ckl_A 15 HLMCVLCGGYFI---DATTIIECLHSFCKTCIVRYLET-----SKYCPICDVQ 59 (108)
T ss_dssp GTBCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHTS-----CSBCTTTCCB
T ss_pred cCCCccCChHHh---CcCEeCCCCChhhHHHHHHHHHh-----CCcCcCCCcc
Confidence 356999988764 34555689999999998643221 2689999864
No 99
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=55.94 E-value=4.6 Score=30.37 Aligned_cols=45 Identities=24% Similarity=0.506 Sum_probs=30.9
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
+..|++|...+.. ..+- .|+.-||..|+.--... ....||.|+..
T Consensus 15 ~~~C~iC~~~~~~--p~~~--~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 59 (115)
T 3l11_A 15 ECQCGICMEILVE--PVTL--PCNHTLCKPCFQSTVEK----ASLCCPFCRRR 59 (115)
T ss_dssp HHBCTTTCSBCSS--CEEC--TTSCEECHHHHCCCCCT----TTSBCTTTCCB
T ss_pred CCCCccCCcccCc--eeEc--CCCCHHhHHHHHHHHhH----CcCCCCCCCcc
Confidence 3569999987642 2222 68889999998644321 24789999864
No 100
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=54.16 E-value=5.8 Score=28.97 Aligned_cols=45 Identities=20% Similarity=0.517 Sum_probs=31.5
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|++|...+.+ -+..-.|+..||..|+.---. ....||.|+..
T Consensus 22 ~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~-----~~~~CP~Cr~~ 66 (99)
T 2y43_A 22 LLRCGICFEYFNI---AMIIPQCSHNYCSLCIRKFLS-----YKTQCPTCCVT 66 (99)
T ss_dssp HTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHT-----TCCBCTTTCCB
T ss_pred CCCcccCChhhCC---cCEECCCCCHhhHHHHHHHHH-----CCCCCCCCCCc
Confidence 3569999987642 334457899999999854322 13689999864
No 101
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=53.74 E-value=2.2 Score=29.67 Aligned_cols=49 Identities=16% Similarity=0.328 Sum_probs=29.0
Q ss_pred CcceecccCCcccCCCceEE-c--cCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 196 GETLCGACGENYAADEFWIC-C--DVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIq-C--D~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
+...|.||....+ +.+|. | .+.-++||..|+.-=-... ....|+.|...
T Consensus 5 ~~~~CrIC~~~~~--~~l~~PC~C~gs~~~~H~~Cl~~W~~~~---~~~~C~~C~~~ 56 (60)
T 1vyx_A 5 DVPVCWICNEELG--NERFRACGCTGELENVHRSCLSTWLTIS---RNTACQICGVV 56 (60)
T ss_dssp SCCEETTTTEECS--CCCCCSCCCSSGGGSCCHHHHHHHHHHH---TCSBCTTTCCB
T ss_pred CCCEeEEeecCCC--CceecCcCCCCchhhhHHHHHHHHHHhC---CCCccCCCCCe
Confidence 3456999977532 23332 3 3444699999985321111 13689999854
No 102
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=53.73 E-value=3.8 Score=27.71 Aligned_cols=44 Identities=20% Similarity=0.378 Sum_probs=29.3
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
..|.+|...+.. -+..-.|+.-||..|+.--... ...||.|+..
T Consensus 6 ~~C~IC~~~~~~---~~~~~~C~H~fc~~Ci~~~~~~-----~~~CP~Cr~~ 49 (68)
T 1chc_A 6 ERCPICLEDPSN---YSMALPCLHAFCYVCITRWIRQ-----NPTCPLCKVP 49 (68)
T ss_dssp CCCSSCCSCCCS---CEEETTTTEEESTTHHHHHHHH-----SCSTTTTCCC
T ss_pred CCCeeCCccccC---CcEecCCCCeeHHHHHHHHHhC-----cCcCcCCChh
Confidence 459999887642 1233468888999998542221 2579999854
No 103
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=53.31 E-value=4.5 Score=29.89 Aligned_cols=47 Identities=21% Similarity=0.376 Sum_probs=30.7
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|++|...+... .. -.|+..||..|+.---... .....||.|+..
T Consensus 21 ~~~C~IC~~~~~~p-~~---~~CgH~fC~~Ci~~~~~~~--~~~~~CP~Cr~~ 67 (112)
T 1jm7_A 21 ILECPICLELIKEP-VS---TKCDHIFCKFCMLKLLNQK--KGPSQCPLCKND 67 (112)
T ss_dssp HTSCSSSCCCCSSC-CB---CTTSCCCCSHHHHHHHHSS--SSSCCCTTTSCC
T ss_pred CCCCcccChhhcCe-EE---CCCCCHHHHHHHHHHHHhC--CCCCCCcCCCCc
Confidence 34699999876422 22 2689999999986332211 124789999863
No 104
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.23 E-value=2.1 Score=29.27 Aligned_cols=42 Identities=26% Similarity=0.556 Sum_probs=28.8
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
...|.+|...+.. .. -.|...||..|+.--.. ....||.|+.
T Consensus 15 ~~~C~IC~~~~~~--~~---~~CgH~fc~~Ci~~~~~-----~~~~CP~Cr~ 56 (70)
T 2ecn_A 15 EEECCICMDGRAD--LI---LPCAHSFCQKCIDKWSD-----RHRNCPICRL 56 (70)
T ss_dssp CCCCSSSCCSCCS--EE---ETTTEEECHHHHHHSSC-----CCSSCHHHHH
T ss_pred CCCCeeCCcCccC--cc---cCCCCcccHHHHHHHHH-----CcCcCCCcCC
Confidence 4569999987653 22 35788899999864322 2467998874
No 105
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=50.67 E-value=3.5 Score=31.54 Aligned_cols=44 Identities=20% Similarity=0.452 Sum_probs=30.3
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
..|++|...+.+ .. .- .|+.-||..|+.---. ...+.||.|+..
T Consensus 53 ~~C~IC~~~~~~--p~-~~-~CgH~fC~~Ci~~~~~----~~~~~CP~Cr~~ 96 (124)
T 3fl2_A 53 FQCICCQELVFR--PI-TT-VCQHNVCKDCLDRSFR----AQVFSCPACRYD 96 (124)
T ss_dssp TBCTTTSSBCSS--EE-EC-TTSCEEEHHHHHHHHH----TTCCBCTTTCCB
T ss_pred CCCCcCChHHcC--cE-Ee-eCCCcccHHHHHHHHh----HCcCCCCCCCcc
Confidence 469999987642 22 22 7899999999853322 134789999864
No 106
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=50.24 E-value=8.1 Score=33.74 Aligned_cols=47 Identities=21% Similarity=0.514 Sum_probs=33.9
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
....|.+|...-. .=+.|..|..-||..|+.---.. -..-.||.|..
T Consensus 179 ~i~~C~iC~~iv~---~g~~C~~C~~~~H~~C~~~~~~~---~~~~~CP~C~~ 225 (238)
T 3nw0_A 179 AVKICNICHSLLI---QGQSCETCGIRMHLPCVAKYFQS---NAEPRCPHCND 225 (238)
T ss_dssp TCCBCTTTCSBCS---SCEECSSSCCEECHHHHHHHTTT---CSSCBCTTTCC
T ss_pred CCCcCcchhhHHh---CCcccCccChHHHHHHHHHHHHh---CCCCCCCCCCC
Confidence 3667999998654 23889999999999999642111 12367999985
No 107
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=49.14 E-value=4.5 Score=31.72 Aligned_cols=43 Identities=21% Similarity=0.585 Sum_probs=28.8
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
..|++|...+. +-.++ .|+..||..|+.---. ....||.|+..
T Consensus 54 ~~C~iC~~~~~-~~~~~---~CgH~fc~~Ci~~~~~-----~~~~CP~Cr~~ 96 (138)
T 4ayc_A 54 LQCIICSEYFI-EAVTL---NCAHSFCSYCINEWMK-----RKIECPICRKD 96 (138)
T ss_dssp SBCTTTCSBCS-SEEEE---TTSCEEEHHHHHHHTT-----TCSBCTTTCCB
T ss_pred CCCcccCcccC-CceEC---CCCCCccHHHHHHHHH-----cCCcCCCCCCc
Confidence 46999998764 22222 5888999999853211 23579999853
No 108
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=44.88 E-value=6.9 Score=26.31 Aligned_cols=50 Identities=22% Similarity=0.542 Sum_probs=30.9
Q ss_pred cceecccCC-cccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 197 ETLCGACGE-NYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 197 ~t~C~iC~~-py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
+..|++|.. .+......+.=-.|+.-||..|+.--... ....||.|+..-
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~~ 53 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVR----GAGNCPECGTPL 53 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHT----TSSSCTTTCCCC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHc----CCCcCCCCCCcc
Confidence 346999998 55432221111478889999998643211 236799998643
No 109
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=43.87 E-value=25 Score=26.56 Aligned_cols=34 Identities=26% Similarity=0.629 Sum_probs=27.6
Q ss_pred CceEEccCCC-CeeeccccccCccccCCCCeEEcCCCCC
Q 025377 211 EFWICCDVCE-KWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 211 ~~mIqCD~Ce-~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
-.+|-|..|. .=-|..|..+... .+.|.|..|..
T Consensus 44 W~L~lC~~Cgs~gtH~~Cs~l~~~----~~~weC~~C~~ 78 (85)
T 1weq_A 44 WRLILCATCGSHGTHRDCSSLRPN----SKKWECNECLP 78 (85)
T ss_dssp TBCEECSSSCCCEECSGGGTCCTT----CSCCCCTTTSC
T ss_pred EEEEeCcccCCchhHHHHhCCcCC----CCCEECCcCcc
Confidence 3478999997 7889999998643 36799999985
No 110
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.37 E-value=13 Score=27.04 Aligned_cols=45 Identities=22% Similarity=0.566 Sum_probs=31.4
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 248 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~ 248 (253)
..|.+|..... .-+.|..|..-||..|+.-=-... ..=.||.|..
T Consensus 16 ~~C~IC~~~i~---~g~~C~~C~h~fH~~Ci~kWl~~~---~~~~CP~Cr~ 60 (74)
T 2ct0_A 16 KICNICHSLLI---QGQSCETCGIRMHLPCVAKYFQSN---AEPRCPHCND 60 (74)
T ss_dssp CBCSSSCCBCS---SSEECSSSCCEECHHHHHHHSTTC---SSCCCTTTCS
T ss_pred CcCcchhhHcc---cCCccCCCCchhhHHHHHHHHHhc---CCCCCCCCcC
Confidence 35999998764 246899999999999996211110 1146999985
No 111
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=37.57 E-value=24 Score=32.00 Aligned_cols=38 Identities=21% Similarity=0.215 Sum_probs=29.0
Q ss_pred ccCcceecccCCcccC-CCceEEccCCCCeeeccccccC
Q 025377 194 EHGETLCGACGENYAA-DEFWICCDVCEKWFHGKCVKIT 231 (253)
Q Consensus 194 d~~~t~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgit 231 (253)
....+.|..|+..... ...-..|..|+..+|..|...-
T Consensus 354 ~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~ 392 (406)
T 2vrw_B 354 FEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRV 392 (406)
T ss_dssp CSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGS
T ss_pred CCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhC
Confidence 3467899999986531 2345789999999999998743
No 112
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=36.95 E-value=13 Score=33.85 Aligned_cols=53 Identities=28% Similarity=0.676 Sum_probs=32.1
Q ss_pred CcceecccCCcc----------cCCCceEEccCCCCeeec---cccccCcc---------c------cCCCCeEEcCCCC
Q 025377 196 GETLCGACGENY----------AADEFWICCDVCEKWFHG---KCVKITPA---------R------AEHIKQYKCPSCS 247 (253)
Q Consensus 196 ~~t~C~iC~~py----------~~d~~mIqCD~Ce~WfH~---~CVgit~~---------~------a~~id~y~Cp~C~ 247 (253)
...+|++||..- ..+..+..|..|+.-+|. .|..-... . .+......|..|.
T Consensus 181 ~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~~~l~y~~~e~~~~~~~~~~~r~e~C~~C~ 260 (309)
T 2fiy_A 181 SRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEESKHLAYLSLEHDGQPAEKAVLRAETCPSCQ 260 (309)
T ss_dssp TCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCCSCCEEECCCC-CCCSTTCSEEEEEETTTT
T ss_pred cCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCCCCeeEEEecCccccCCCcceEEEEccccc
Confidence 456899998632 123358999999955565 56432211 0 1223578899997
Q ss_pred C
Q 025377 248 N 248 (253)
Q Consensus 248 ~ 248 (253)
.
T Consensus 261 ~ 261 (309)
T 2fiy_A 261 G 261 (309)
T ss_dssp E
T ss_pred c
Confidence 4
No 113
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=35.59 E-value=20 Score=27.00 Aligned_cols=43 Identities=26% Similarity=0.590 Sum_probs=28.8
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|++|...+... +.-..|+.-|+..|+.--.. ..||.|+..
T Consensus 22 ~~~C~IC~~~~~~p---v~~~~CgH~fC~~Ci~~~~~-------~~CP~Cr~~ 64 (117)
T 1jm7_B 22 LLRCSRCTNILREP---VCLGGCEHIFCSNCVSDCIG-------TGCPVCYTP 64 (117)
T ss_dssp TTSCSSSCSCCSSC---BCCCSSSCCBCTTTGGGGTT-------TBCSSSCCB
T ss_pred CCCCCCCChHhhCc---cEeCCCCCHHHHHHHHHHhc-------CCCcCCCCc
Confidence 45699999876422 22225788899999854322 579999864
No 114
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=35.24 E-value=13 Score=29.75 Aligned_cols=45 Identities=18% Similarity=0.434 Sum_probs=31.3
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|++|...+.+ ..+ -.|..-||..|+.--... ..+.||.|+..
T Consensus 78 ~~~C~IC~~~~~~--pv~--~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 122 (150)
T 1z6u_A 78 SFMCVCCQELVYQ--PVT--TECFHNVCKDCLQRSFKA----QVFSCPACRHD 122 (150)
T ss_dssp HTBCTTTSSBCSS--EEE--CTTSCEEEHHHHHHHHHT----TCCBCTTTCCB
T ss_pred CCEeecCChhhcC--CEE--cCCCCchhHHHHHHHHHh----CCCcCCCCCcc
Confidence 4579999987642 222 378999999998643321 34789999864
No 115
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=35.02 E-value=7 Score=32.29 Aligned_cols=50 Identities=22% Similarity=0.472 Sum_probs=37.1
Q ss_pred CcceecccCCcccC-CCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 196 GETLCGACGENYAA-DEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 196 ~~t~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
++..|..|+.++.- +..-..|-.|..=+-..|-..... ...|+|..|...
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~~~----~~~W~C~vC~k~ 117 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAHPE----EQGWLCDPCHLA 117 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECCSS----SSSCEEHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccccccCC----CCcEeeHHHHHH
Confidence 45679999998532 345688999999888899865543 256999999754
No 116
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=34.09 E-value=35 Score=22.12 Aligned_cols=34 Identities=24% Similarity=0.540 Sum_probs=27.1
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCc
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITP 232 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~ 232 (253)
..++|..|++.-- .-.+|..|..-.|..|...-+
T Consensus 13 ~pt~C~~C~~~l~---qG~~C~~C~~~~H~~C~~~v~ 46 (52)
T 1faq_A 13 KLAFCDICQKFLL---NGFRCQTCGYKFHEHCSTKVP 46 (52)
T ss_dssp SCEECTTSSSEEC---SEEECTTTTCCBCSTTSSSSS
T ss_pred CCcCCCCcccccc---cCCEeCCCCCeEChhHHhhCc
Confidence 4578999988642 567999999999999987543
No 117
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=33.69 E-value=9.6 Score=28.48 Aligned_cols=48 Identities=23% Similarity=0.574 Sum_probs=30.8
Q ss_pred cceecccCCcccCC---CceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAAD---EFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d---~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|++|...+.+. +..+.--.|+.-||..|+.---.. ...||.|+..
T Consensus 7 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~ 57 (133)
T 4ap4_A 7 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRKK 57 (133)
T ss_dssp SCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTT-----CSBCTTTCCB
T ss_pred CCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHh-----CCCCCCCCCc
Confidence 45699999876432 233344478889999998543221 2378888753
No 118
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=33.47 E-value=38 Score=24.13 Aligned_cols=36 Identities=22% Similarity=0.517 Sum_probs=28.7
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCc
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITP 232 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~ 232 (253)
...++|..|+.-- .....+|..|.--.|.+|...-+
T Consensus 33 ~~pt~C~~C~~~l--~~qG~kC~~C~~~cHkkC~~~V~ 68 (72)
T 2fnf_X 33 GGPGWCDLCGREV--LRQALRCANCKFTCHSECRSLIQ 68 (72)
T ss_dssp SSCCBCTTTSSBC--SSCCEECTTSSCEECTGGGGGCC
T ss_pred CCCcchhhhhHHH--HhCcCccCCCCCeechhhhccCc
Confidence 3567899998765 45678999999999999986543
No 119
>4dmb_A HD domain-containing protein 2; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium (NESG); HET: MSE GOL; 1.90A {Homo sapiens}
Probab=33.46 E-value=22 Score=30.56 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=29.0
Q ss_pred hhhhhhhHHHHHhhhhccccccChhhhHHHHHhhhcCCceeeeecc
Q 025377 94 VAVHSDAWLLSVAFYFGARFGFDKSDRKRLFNMINELPTIFEVVTG 139 (253)
Q Consensus 94 va~h~d~wl~~~~~~~~~~~~f~~~~r~~lf~min~LPTv~EvVtg 139 (253)
||=| ||.+++..++-+-.+.|. +|-.+..|+-|+| |+++|
T Consensus 46 VAEH--S~~vAliA~~l~~~~vD~-~r~~~maL~HDl~---E~~tG 85 (204)
T 4dmb_A 46 VSDH--MYRMAVMAMVIKDDRLNK-DRCVRLALVHDMA---ECIVG 85 (204)
T ss_dssp HHHH--HHHHHHHHHHSCCTTSCH-HHHHHHHHHTTTT---HHHHC
T ss_pred HHHH--HHHHHHHHHHHccccCCH-HHHHHHHHhcchH---HhhcC
Confidence 5666 599998777655433354 3667778999998 99999
No 120
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=33.43 E-value=32 Score=22.08 Aligned_cols=36 Identities=25% Similarity=0.488 Sum_probs=27.5
Q ss_pred CcceecccCCcccC-CCceEEccCCCCeeeccccccC
Q 025377 196 GETLCGACGENYAA-DEFWICCDVCEKWFHGKCVKIT 231 (253)
Q Consensus 196 ~~t~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgit 231 (253)
..++|..|+..--. .....+|..|..-.|..|...-
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v 46 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKV 46 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTS
T ss_pred CCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhhc
Confidence 45789999875421 2467899999999999998654
No 121
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=33.14 E-value=38 Score=24.19 Aligned_cols=37 Identities=24% Similarity=0.489 Sum_probs=28.6
Q ss_pred cCcceecccCCcccC-CCceEEccCCCCeeeccccccC
Q 025377 195 HGETLCGACGENYAA-DEFWICCDVCEKWFHGKCVKIT 231 (253)
Q Consensus 195 ~~~t~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgit 231 (253)
...++|.+|++.--. ...-.+|..|..-.|-.|....
T Consensus 32 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v 69 (77)
T 2enn_A 32 PQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKV 69 (77)
T ss_dssp SSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSSC
T ss_pred CCCcCccccChhhccccccccCcCCCCCcCCHhHHhhC
Confidence 467899999875421 2456899999999999998654
No 122
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=32.25 E-value=26 Score=25.53 Aligned_cols=30 Identities=23% Similarity=0.721 Sum_probs=20.6
Q ss_pred ccCcceecccCCcccCCCceEEccCCC-Ceeecccc
Q 025377 194 EHGETLCGACGENYAADEFWICCDVCE-KWFHGKCV 228 (253)
Q Consensus 194 d~~~t~C~iC~~py~~d~~mIqCD~Ce-~WfH~~CV 228 (253)
+++..+|+||+.. --+.|-.|+ ..|-..|-
T Consensus 5 ~ee~pWC~ICneD-----AtlrC~gCdgDLYC~rC~ 35 (67)
T 2d8v_A 5 SSGLPWCCICNED-----ATLRCAGCDGDLYCARCF 35 (67)
T ss_dssp CCCCSSCTTTCSC-----CCEEETTTTSEEECSSHH
T ss_pred CcCCCeeEEeCCC-----CeEEecCCCCceehHHHH
Confidence 3456789999864 348888884 66666663
No 123
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=32.01 E-value=20 Score=30.16 Aligned_cols=13 Identities=23% Similarity=0.739 Sum_probs=9.3
Q ss_pred ccCcceecccCCc
Q 025377 194 EHGETLCGACGEN 206 (253)
Q Consensus 194 d~~~t~C~iC~~p 206 (253)
|.++.+|.+|+..
T Consensus 4 d~~~~~C~~C~~~ 16 (207)
T 3u5n_A 4 DPNEDWCAVCQNG 16 (207)
T ss_dssp CSSCSSBTTTCCC
T ss_pred CCCCCCCCCCCCC
Confidence 4455679999964
No 124
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=31.67 E-value=20 Score=27.03 Aligned_cols=45 Identities=20% Similarity=0.298 Sum_probs=30.1
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|++|..... .-+.. .|+..|+..|+.---... ...||.|+..
T Consensus 18 ~~~C~IC~~~~~---~p~~~-~CgH~fC~~Ci~~~~~~~----~~~CP~Cr~~ 62 (118)
T 3hct_A 18 KYECPICLMALR---EAVQT-PCGHRFCKACIIKSIRDA----GHKCPVDNEI 62 (118)
T ss_dssp GGBCTTTCSBCS---SEEEC-TTSCEEEHHHHHHHHHHH----CSBCTTTCCB
T ss_pred CCCCCcCChhhc---CeEEC-CcCChhhHHHHHHHHhhC----CCCCCCCCCC
Confidence 357999998764 22443 699999999985432221 1379999753
No 125
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=30.95 E-value=24 Score=25.38 Aligned_cols=31 Identities=13% Similarity=0.102 Sum_probs=21.6
Q ss_pred CcceecccCCccc--CCCceEEccCCCCeeecc
Q 025377 196 GETLCGACGENYA--ADEFWICCDVCEKWFHGK 226 (253)
Q Consensus 196 ~~t~C~iC~~py~--~d~~mIqCD~Ce~WfH~~ 226 (253)
+...|+.|+.+-. ..+..+.|..|+.+|=..
T Consensus 7 eiL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (69)
T 2pk7_A 7 DILACPICKGPLKLSADKTELISKGAGLAYPIR 39 (69)
T ss_dssp GTCCCTTTCCCCEECTTSSEEEETTTTEEEEEE
T ss_pred hheeCCCCCCcCeEeCCCCEEEcCCCCcEecCc
Confidence 3457999987532 345677899999888543
No 126
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=30.76 E-value=25 Score=25.39 Aligned_cols=31 Identities=13% Similarity=0.273 Sum_probs=21.9
Q ss_pred CcceecccCCcc--cCCCceEEccCCCCeeecc
Q 025377 196 GETLCGACGENY--AADEFWICCDVCEKWFHGK 226 (253)
Q Consensus 196 ~~t~C~iC~~py--~~d~~mIqCD~Ce~WfH~~ 226 (253)
+...|++|+.+- +..+..+.|..|+.+|=..
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (70)
T 2js4_A 7 DILVCPVCKGRLEFQRAQAELVCNADRLAFPVR 39 (70)
T ss_dssp CCCBCTTTCCBEEEETTTTEEEETTTTEEEEEE
T ss_pred hheECCCCCCcCEEeCCCCEEEcCCCCceecCC
Confidence 345799998753 3345677899999888653
No 127
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=30.37 E-value=23 Score=25.41 Aligned_cols=29 Identities=14% Similarity=0.125 Sum_probs=20.3
Q ss_pred cceecccCCcc--cCCCceEEccCCCCeeec
Q 025377 197 ETLCGACGENY--AADEFWICCDVCEKWFHG 225 (253)
Q Consensus 197 ~t~C~iC~~py--~~d~~mIqCD~Ce~WfH~ 225 (253)
...|++|+.+- +..+..+.|..|..+|=.
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI 38 (68)
T 2hf1_A 8 ILVCPLCKGPLVFDKSKDELICKGDRLAFPI 38 (68)
T ss_dssp ECBCTTTCCBCEEETTTTEEEETTTTEEEEE
T ss_pred heECCCCCCcCeEeCCCCEEEcCCCCcEecC
Confidence 45799998753 234567779999888754
No 128
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.18 E-value=51 Score=23.76 Aligned_cols=37 Identities=22% Similarity=0.472 Sum_probs=28.4
Q ss_pred cCcceecccCCcccC-CCceEEccCCCCeeeccccccC
Q 025377 195 HGETLCGACGENYAA-DEFWICCDVCEKWFHGKCVKIT 231 (253)
Q Consensus 195 ~~~t~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgit 231 (253)
...++|..|+..--. .....+|..|..-.|-.|....
T Consensus 26 ~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~v 63 (83)
T 2yuu_A 26 GQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKI 63 (83)
T ss_dssp SSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGTC
T ss_pred CCCcChhhcChhhccccccccccCCcCCeeChhhhhhC
Confidence 456889999875421 2456899999999999998753
No 129
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=30.11 E-value=26 Score=25.12 Aligned_cols=30 Identities=7% Similarity=-0.004 Sum_probs=21.0
Q ss_pred CcceecccCCcc--cCCCceEEccCCCCeeec
Q 025377 196 GETLCGACGENY--AADEFWICCDVCEKWFHG 225 (253)
Q Consensus 196 ~~t~C~iC~~py--~~d~~mIqCD~Ce~WfH~ 225 (253)
+...|++|+.+- +.....+.|..|+.+|=.
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI 38 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQDKQELWSRQAKLAYPI 38 (68)
T ss_dssp CCCBCSSSCCBCEEETTTTEEEETTTTEEEEE
T ss_pred hheECCCCCCcCeEeCCCCEEEcCCCCcEecC
Confidence 345799998753 234567779999888854
No 130
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=29.30 E-value=24 Score=25.51 Aligned_cols=45 Identities=24% Similarity=0.473 Sum_probs=23.2
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
....|.+|+-.|+...-.- -++..-|..-.. ..+.|.||.|...+
T Consensus 6 ~~y~C~vCGyiYd~~~Gdp--------~~gi~pGT~f~~--lPddw~CP~Cga~K 50 (70)
T 1dx8_A 6 GKYECEACGYIYEPEKGDK--------FAGIPPGTPFVD--LSDSFMCPACRSPK 50 (70)
T ss_dssp SCEEETTTCCEECTTTCCT--------TTTCCSSCCGGG--SCTTCBCTTTCCBG
T ss_pred ceEEeCCCCEEEcCCCCCc--------ccCcCCCCchhh--CCCCCcCCCCCCCH
Confidence 3467888887776421100 011222222222 34679999998643
No 131
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=28.43 E-value=29 Score=24.89 Aligned_cols=30 Identities=7% Similarity=-0.058 Sum_probs=21.1
Q ss_pred CcceecccCCcc--cCCCceEEccCCCCeeec
Q 025377 196 GETLCGACGENY--AADEFWICCDVCEKWFHG 225 (253)
Q Consensus 196 ~~t~C~iC~~py--~~d~~mIqCD~Ce~WfH~ 225 (253)
+...|++|+.+- +..+..+.|..|..+|=.
T Consensus 9 eiL~CP~ck~~L~~~~~~g~LvC~~c~~~YPI 40 (67)
T 2jny_A 9 EVLACPKDKGPLRYLESEQLLVNERLNLAYRI 40 (67)
T ss_dssp CCCBCTTTCCBCEEETTTTEEEETTTTEEEEE
T ss_pred HHhCCCCCCCcCeEeCCCCEEEcCCCCccccC
Confidence 456799998753 334556779999988754
No 132
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=28.12 E-value=20 Score=26.92 Aligned_cols=45 Identities=20% Similarity=0.421 Sum_probs=24.2
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 250 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~Kr 250 (253)
....|.+|+-.|++..-.-. .+..-|..-. +.++.|.||.|...+
T Consensus 26 ~~y~C~vCGyvYD~~~Gdp~--------~gI~pGT~fe--dlPddW~CPvCga~K 70 (81)
T 2kn9_A 26 KLFRCIQCGFEYDEALGWPE--------DGIAAGTRWD--DIPDDWSCPDCGAAK 70 (81)
T ss_dssp CEEEETTTCCEEETTTCBTT--------TTBCTTCCTT--TSCTTCCCTTTCCCG
T ss_pred ceEEeCCCCEEEcCCcCCcc--------cCcCCCCChh--HCCCCCcCCCCCCCH
Confidence 45779999988874211100 1111121111 234679999998643
No 133
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=28.05 E-value=52 Score=22.56 Aligned_cols=37 Identities=24% Similarity=0.518 Sum_probs=27.8
Q ss_pred CcceecccCCcccC-CCceEEccCCCCeeeccccccCc
Q 025377 196 GETLCGACGENYAA-DEFWICCDVCEKWFHGKCVKITP 232 (253)
Q Consensus 196 ~~t~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgit~ 232 (253)
..++|..|+..--. ...-.+|..|..-.|-.|...-+
T Consensus 22 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~ 59 (65)
T 2enz_A 22 SPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVA 59 (65)
T ss_dssp SCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTTSC
T ss_pred CCcCchhcChhheecCCcccccCCCCCccCHhHHhhCc
Confidence 45789999875421 24568899999999999987543
No 134
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=27.73 E-value=28 Score=35.27 Aligned_cols=31 Identities=29% Similarity=0.698 Sum_probs=23.4
Q ss_pred ceecccCCcccCCCceEEccCCCCeeecccccc
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKI 230 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgi 230 (253)
.-|.+||... ..-.++|-.|.+||...-.+.
T Consensus 12 ~~c~yc~~~~--~~~~~~c~~~~~wfcn~~~~~ 42 (802)
T 2xzl_A 12 NSCAYCGIDS--AKCVIKCNSCKKWFCNTKNGT 42 (802)
T ss_dssp CCCTTTCCCC--TTTEEEETTTCCEEECCCSSS
T ss_pred hhCcccCCCC--CceEEEeCCCCcEecCCCCCC
Confidence 3588898863 468999999999997744433
No 135
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=26.90 E-value=20 Score=28.57 Aligned_cols=30 Identities=30% Similarity=0.566 Sum_probs=20.2
Q ss_pred cCcceecccCCcccC--C----CceEEccCCCCeeec
Q 025377 195 HGETLCGACGENYAA--D----EFWICCDVCEKWFHG 225 (253)
Q Consensus 195 ~~~t~C~iC~~py~~--d----~~mIqCD~Ce~WfH~ 225 (253)
.....| -|+..|.- + +..|.|..|..||..
T Consensus 110 ~f~~~C-rCG~~f~i~~~~l~~~~~v~C~sCSl~~~v 145 (155)
T 2l6l_A 110 SFYLSC-RCGGKYSVSKDEAEEVSLISCDTCSLIIEL 145 (155)
T ss_dssp EEEEEC-SSSCEEEEETTHHHHCCEEECSSSSCEEEE
T ss_pred EEEEcC-CCCCeEEecHHHhCCCCEEECCCCceEEEE
Confidence 444567 59875432 1 257999999999854
No 136
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.18 E-value=66 Score=23.34 Aligned_cols=37 Identities=30% Similarity=0.613 Sum_probs=28.1
Q ss_pred CcceecccCCcccC-CCceEEccCCCCeeeccccccCc
Q 025377 196 GETLCGACGENYAA-DEFWICCDVCEKWFHGKCVKITP 232 (253)
Q Consensus 196 ~~t~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgit~ 232 (253)
..++|..|+..--. ...-.+|..|..-.|-.|...-+
T Consensus 27 ~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~ 64 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVP 64 (85)
T ss_dssp SCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSC
T ss_pred CCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcC
Confidence 56789999875421 24568999999999999987543
No 137
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=25.89 E-value=76 Score=24.51 Aligned_cols=29 Identities=17% Similarity=0.344 Sum_probs=21.5
Q ss_pred EEccCCCCeeeccccccCccccCCCCeEEc
Q 025377 214 ICCDVCEKWFHGKCVKITPARAEHIKQYKC 243 (253)
Q Consensus 214 IqCD~Ce~WfH~~CVgit~~~a~~id~y~C 243 (253)
+.|..|..-||..|+.-...... .+.|.|
T Consensus 70 ~~C~~Cp~sfC~~c~~g~l~~~~-~~~~~c 98 (107)
T 4gne_A 70 SFCEFCPHSFCKDHEKGALVPSA-LEGRLC 98 (107)
T ss_dssp EECSSSSCEECTTTCTTSCEECT-TTTCEE
T ss_pred cCcCCCCcchhhhccCCcceecC-CCCcee
Confidence 88999999999999965544332 356776
No 138
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=25.78 E-value=36 Score=22.73 Aligned_cols=13 Identities=23% Similarity=0.787 Sum_probs=10.2
Q ss_pred CCeEEcCCCCCcC
Q 025377 238 IKQYKCPSCSNKR 250 (253)
Q Consensus 238 id~y~Cp~C~~Kr 250 (253)
++.|.||.|...+
T Consensus 28 P~dw~CP~Cg~~k 40 (46)
T 6rxn_A 28 PDDWCCPVCGVSK 40 (46)
T ss_dssp CTTCBCTTTCCBG
T ss_pred CCCCcCcCCCCcH
Confidence 4679999998654
No 139
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=24.74 E-value=33 Score=23.60 Aligned_cols=31 Identities=16% Similarity=0.324 Sum_probs=22.0
Q ss_pred CcceecccCCcccCCCceEEcc--CCCCeeecc
Q 025377 196 GETLCGACGENYAADEFWICCD--VCEKWFHGK 226 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD--~Ce~WfH~~ 226 (253)
+...|+.|+.+-..+...+.|. .|..+|-..
T Consensus 9 ~iL~CP~c~~~L~~~~~~L~C~~~~c~~~YPI~ 41 (56)
T 2kpi_A 9 EILACPACHAPLEERDAELICTGQDCGLAYPVR 41 (56)
T ss_dssp TSCCCSSSCSCEEEETTEEEECSSSCCCEEEEE
T ss_pred hheeCCCCCCcceecCCEEEcCCcCCCcEEeeE
Confidence 4567999998643344667899 899888543
No 140
>3g2b_A Coenzyme PQQ synthesis protein D; helix-turn-helix, PQQ biosynthesis, biosynthetic protein; 1.66A {Xanthomonas campestris PV}
Probab=23.31 E-value=63 Score=24.17 Aligned_cols=32 Identities=9% Similarity=0.150 Sum_probs=23.9
Q ss_pred CCCHHHHHhhhhhhhhHHHHHhhHHHHHHHhh
Q 025377 9 PRTVEEVFGDFKGRRAGMIKALTTEVEEFYHQ 40 (253)
Q Consensus 9 ~~~~~~~f~d~~~rr~~~~~alt~d~~~f~~~ 40 (253)
.|||++|-.....+=..-...+..||.+|.++
T Consensus 55 ~rtv~eIv~~L~~~y~~~~e~i~~DV~~FL~~ 86 (95)
T 3g2b_A 55 TQSLAQIAQTLAAEFDADASEIETDVIELTTT 86 (95)
T ss_dssp SSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 69999998777766654445677899998764
No 141
>2gz4_A Hypothetical protein ATU1052; structural genomics, PSI, protein structure initiative; 1.50A {Agrobacterium tumefaciens} SCOP: a.211.1.1
Probab=23.19 E-value=48 Score=28.54 Aligned_cols=83 Identities=22% Similarity=0.282 Sum_probs=47.1
Q ss_pred CceeeeCCCCCCCCCCCCCc-cCc--------cccCCC-cccccchhhhhhhhhhHHHHHhhhhccccccChhhhHHHHH
Q 025377 56 EQWEVNLPAEEVPPELPEPA-LGI--------NFARDG-MQEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKSDRKRLFN 125 (253)
Q Consensus 56 ~~w~v~~p~~~~p~~~pep~-~gi--------n~~rd~-~~~~~wl~~va~h~d~wl~~~~~~~~~~~~f~~~~r~~lf~ 125 (253)
..|-.++---.+-+-=|.|. +-| +..|=| +.+..---=||=|| |++++..+.-+. +.| .|-.+..
T Consensus 8 ~~w~~~~SGr~~Dll~P~~~~i~i~dia~~Lk~i~R~~~~~~~~~~eSVAeHS--~~va~ia~~l~~-~~~--~r~~~~a 82 (207)
T 2gz4_A 8 RAWQRMLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTRGDHAFTVAQHC--LIVETIFCRMCP-GAT--PDEMQMA 82 (207)
T ss_dssp CCEEECTTSCEEESSSCCGGGCCHHHHHHHHTTCBSGGGCCSSSSCCBHHHHH--HHHHHHHHHHCT-TCC--HHHHHHH
T ss_pred cchhccccCCcccCCCCChhhhhHHHHHHHHhhCcccCCCCCCCCCccHHHHH--HHHHHHHHHHCC-CCC--HHHHHHH
Confidence 45555555444544455554 111 123333 22332334488886 999876554332 234 6788889
Q ss_pred hhhcCCceeeeeccccccccc
Q 025377 126 MINELPTIFEVVTGTTKKQAK 146 (253)
Q Consensus 126 min~LPTv~EvVtg~~kkq~k 146 (253)
|+-|+| |+++|--..+.|
T Consensus 83 L~HD~~---E~~~GDi~tPvK 100 (207)
T 2gz4_A 83 LLHDAP---EYVIGDMISPFK 100 (207)
T ss_dssp HTTTTT---HHHHCCCCGGGG
T ss_pred HhcCch---HhhccCCChHhh
Confidence 999998 889995544433
No 142
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=23.06 E-value=48 Score=22.85 Aligned_cols=37 Identities=22% Similarity=0.360 Sum_probs=27.7
Q ss_pred CcceecccCCcccC-CCceEEccCCCCeeeccccccCc
Q 025377 196 GETLCGACGENYAA-DEFWICCDVCEKWFHGKCVKITP 232 (253)
Q Consensus 196 ~~t~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgit~ 232 (253)
..++|..|+..--. ...-.+|..|..-.|.+|...-+
T Consensus 23 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~ 60 (66)
T 1y8f_A 23 TPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLLN 60 (66)
T ss_dssp SCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHHSC
T ss_pred CCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhhCc
Confidence 45789999875421 23568899999999999987543
No 143
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=22.76 E-value=46 Score=22.62 Aligned_cols=36 Identities=22% Similarity=0.517 Sum_probs=28.3
Q ss_pred cCcceecccCCcccCCCceEEccCCCCeeeccccccCc
Q 025377 195 HGETLCGACGENYAADEFWICCDVCEKWFHGKCVKITP 232 (253)
Q Consensus 195 ~~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~ 232 (253)
...++|..|+.-- .....+|..|.--.|-+|...-+
T Consensus 20 ~~pt~C~~C~~~i--~kqg~kC~~C~~~cH~kC~~~v~ 55 (59)
T 1rfh_A 20 GGPGWCDLCGREV--LRQALRCANCKFTCHSECRSLIQ 55 (59)
T ss_dssp SCCEECTTTCSEE--CSCCEECTTTSCEECHHHHTTCC
T ss_pred CCCeEchhcchhh--hhCccEeCCCCCeEehhhhhhCc
Confidence 3567899998765 45678999999999999986543
No 144
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=22.38 E-value=64 Score=19.71 Aligned_cols=9 Identities=44% Similarity=1.084 Sum_probs=6.0
Q ss_pred eEEcCCCCC
Q 025377 240 QYKCPSCSN 248 (253)
Q Consensus 240 ~y~Cp~C~~ 248 (253)
.|.|+.|..
T Consensus 32 ~~~C~~C~~ 40 (57)
T 3uk3_C 32 PYKCEFCEY 40 (57)
T ss_dssp CEECSSSSC
T ss_pred CcCCCCCcc
Confidence 477777764
No 145
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=22.15 E-value=33 Score=25.53 Aligned_cols=45 Identities=22% Similarity=0.385 Sum_probs=30.5
Q ss_pred cceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 197 ETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 197 ~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
...|++|..... ..+. -.|+..||..|+.--... ....||.|+..
T Consensus 23 ~~~C~IC~~~~~---~p~~-~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 67 (116)
T 1rmd_A 23 SISCQICEHILA---DPVE-TSCKHLFCRICILRCLKV----MGSYCPSCRYP 67 (116)
T ss_dssp HTBCTTTCSBCS---SEEE-CTTSCEEEHHHHHHHHHH----TCSBCTTTCCB
T ss_pred CCCCCCCCcHhc---CcEE-cCCCCcccHHHHHHHHhH----CcCcCCCCCCC
Confidence 456999998764 2233 379999999998543221 12579999864
No 146
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A
Probab=21.86 E-value=32 Score=34.92 Aligned_cols=32 Identities=22% Similarity=0.564 Sum_probs=23.8
Q ss_pred ceecccCCcccCCCceEEccCCCCeeeccccccC
Q 025377 198 TLCGACGENYAADEFWICCDVCEKWFHGKCVKIT 231 (253)
Q Consensus 198 t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit 231 (253)
.-|.+|+... ..-.++|-.|.+||...-.+.+
T Consensus 7 ~~c~~c~~~~--~~~~~~~~~~~~~fcn~~~~~~ 38 (800)
T 2wjy_A 7 HACSYCGIHD--PACVVYCNTSKKWFCNGRGNTS 38 (800)
T ss_dssp TSCTTTCCCC--GGGEEEETTTTEEEESCCTTSS
T ss_pred hhccccCCCC--CCeEEEcCCCCCccccCCCCCc
Confidence 3588888763 3689999999999987544433
No 147
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=21.75 E-value=38 Score=26.95 Aligned_cols=46 Identities=20% Similarity=0.294 Sum_probs=31.5
Q ss_pred CcceecccCCcccCCCceEEccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 025377 196 GETLCGACGENYAADEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 249 (253)
Q Consensus 196 ~~t~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgit~~~a~~id~y~Cp~C~~K 249 (253)
+...|++|..... .-+++ .|+..|...|+.--.... ...||.|+..
T Consensus 17 ~~~~C~IC~~~~~---~pv~~-~CgH~fC~~Ci~~~~~~~----~~~CP~Cr~~ 62 (170)
T 3hcs_A 17 SKYECPICLMALR---EAVQT-PCGHRFCKACIIKSIRDA----GHKCPVDNEI 62 (170)
T ss_dssp GGGBCTTTCSBCS---SEEEC-TTSCEEEHHHHHHHHHHH----CSBCTTTCCB
T ss_pred CCCCCCCCChhhc---CcEEC-CCCCHHHHHHHHHHHHhC----CCCCCCCccC
Confidence 3467999998764 34666 699999999986432221 1379999753
No 148
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.60 E-value=27 Score=24.82 Aligned_cols=38 Identities=18% Similarity=0.552 Sum_probs=28.0
Q ss_pred cCcceecccCCcccC-CCceEEccCCCCeeeccccccCc
Q 025377 195 HGETLCGACGENYAA-DEFWICCDVCEKWFHGKCVKITP 232 (253)
Q Consensus 195 ~~~t~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgit~ 232 (253)
...++|..|+..--. ...-.+|..|..-.|-.|+..-+
T Consensus 26 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~ 64 (74)
T 2db6_A 26 KKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVE 64 (74)
T ss_dssp SSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGGGS
T ss_pred CCCcCchhcChhhccccCCccccCCCCCccChhHHhhCC
Confidence 356889999875321 12458999999999999987543
No 149
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=21.20 E-value=39 Score=25.29 Aligned_cols=29 Identities=21% Similarity=0.481 Sum_probs=20.2
Q ss_pred CcceecccCCccc-------CCCceEEccCCCCeeec
Q 025377 196 GETLCGACGENYA-------ADEFWICCDVCEKWFHG 225 (253)
Q Consensus 196 ~~t~C~iC~~py~-------~d~~mIqCD~Ce~WfH~ 225 (253)
....| -||..|. .+...++|+.|.-|...
T Consensus 22 y~ypC-rCGd~F~it~edL~~ge~iv~C~sCSL~I~V 57 (83)
T 1yop_A 22 FTYPC-PCGDRFQIYLDDMFEGEKVAVCPSCSLMIDV 57 (83)
T ss_dssp EEEEE-TTTEEEEEEHHHHHTTCCEEECSSSCCEEEC
T ss_pred EEEeC-CCCCeEEECHHHHhCCCEEEECCCCccEEEE
Confidence 34457 4986442 24678999999998755
No 150
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=20.18 E-value=64 Score=24.07 Aligned_cols=29 Identities=28% Similarity=0.492 Sum_probs=19.9
Q ss_pred CcceecccCCccc-------CCCceEEccCCCCeeec
Q 025377 196 GETLCGACGENYA-------ADEFWICCDVCEKWFHG 225 (253)
Q Consensus 196 ~~t~C~iC~~py~-------~d~~mIqCD~Ce~WfH~ 225 (253)
....| -||..|. .+...++|+.|.-|...
T Consensus 29 y~y~C-rCGd~F~it~edL~~ge~iv~C~sCSL~I~V 64 (83)
T 1wge_A 29 YFYPC-PCGDNFAITKEDLENGEDVATCPSCSLIIKV 64 (83)
T ss_dssp EEECC-SSSSCEEEEHHHHHTTCCEEECTTTCCEEEE
T ss_pred EEEeC-CCCCEEEECHHHHhCCCEEEECCCCceEEEE
Confidence 33446 4887543 24578999999998754
No 151
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=20.05 E-value=59 Score=23.38 Aligned_cols=11 Identities=55% Similarity=1.325 Sum_probs=7.5
Q ss_pred ceecccCCccc
Q 025377 198 TLCGACGENYA 208 (253)
Q Consensus 198 t~C~iC~~py~ 208 (253)
-.|.+|++.+.
T Consensus 29 h~C~~Cgk~F~ 39 (85)
T 2lv2_A 29 HLCPVCGESFA 39 (85)
T ss_dssp EECTTSCCEES
T ss_pred EECCCCCCCcC
Confidence 35888887654
Done!