BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025383
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7JUR6|GDAP2_DROME Protein GDAP2 homolog OS=Drosophila melanogaster GN=CG18812 PE=2
SV=1
Length = 540
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 55 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFC 114
ED +++ + G D+ G + GK+FPA + E+ Y+ K+ + G +
Sbjct: 373 EDLTEVSGIGCLYQSGVDRLGRPVIVFCGKWFPAQNIDLEKALLYLI-KLLDPIVKGDYV 431
Query: 115 IVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLA---FATVGRF 171
I Y HT + +NYP LR +Y LP + K L+ Y +HP W+++ F T
Sbjct: 432 ISYFHT-LTSTNNYPSLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTT---- 486
Query: 172 FLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHD 209
F++ + K+ + +++L++ I K ++EIP ++ +D
Sbjct: 487 FMAPAIKAKVHSLPGVEHLYSAITKDQLEIPAYITEYD 524
>sp|Q292F9|GDAP2_DROPS Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=GA15091 PE=3 SV=1
Length = 542
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 55 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFC 114
ED +++ + G D+ G + GK+FPA + E+ Y+ K+ + G +
Sbjct: 375 EDLTEVSGIGCLYQSGVDRLGRPVIVFCGKWFPAQNIDLEKALLYLI-KLLDPIVKGDYV 433
Query: 115 IVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLA---FATVGRF 171
I Y HT + +NYP LR +Y LP + K L+ Y +HP W+++ F T
Sbjct: 434 ISYFHT-LTSTNNYPSLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTT---- 488
Query: 172 FLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHD 209
F++ + K+ + +++L++ I K ++EIP ++ +D
Sbjct: 489 FMAPAIKAKVHSLPGVEHLYSAITKDQLEIPAYITEYD 526
>sp|Q5CZL1|GDAP2_XENTR Ganglioside-induced differentiation-associated protein 2 OS=Xenopus
tropicalis PE=2 SV=1
Length = 496
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 55 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFC 114
ED SD+ +L+ G D G + +VG+ P ++ E+ Y H + + +
Sbjct: 328 EDLSDIAALKALYQSGVDNCGRTVMVVVGRNIPVLLIDMEKALLYFIH-MMDHVAAKEYV 386
Query: 115 IVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLA---FATVGRF 171
+VY HT + E N+P L+ +Y+ + + K L+ +YF+HP S+++ F T
Sbjct: 387 LVYFHT-LTGEHNHPDSDFLKNMYDIVDVKYKKNLKALYFVHPTFRSKVSSWFFTT---- 441
Query: 172 FLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHD 209
F GL K+ V L L++ + +IEIP FV ++D
Sbjct: 442 FTVSGLKDKVHQVESLHQLFSAVPPEQIEIPPFVLDYD 479
>sp|Q66HX8|GDAP2_DANRE Ganglioside-induced differentiation-associated protein 2 OS=Danio
rerio GN=gdap2 PE=2 SV=1
Length = 504
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 25 RPFLSKQQDTEIEEQEQEQWHDCAQYL--SPDEDFSDLDSLQFFCLQGSDKSGNRIFRLV 82
R + + Q +E+ +Q+Q Q + ++L + ED SD+ +L+ G D G + +V
Sbjct: 307 RKLILQGQMSEVAQQKQHQ-RNYNRWLCKARAEDLSDIAALKALYQTGVDLCGRTVMVVV 365
Query: 83 GKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELP 142
G+ P ++ E+ Y H + + + +VY HT + E N+ L+ +Y+ +
Sbjct: 366 GRNIPVMLIDMEKALLYFIH-VMDHITVKEYVMVYFHT-LTGEHNHLDTDFLKKLYDIVD 423
Query: 143 SRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIP 202
++ K L+ YF+HP S+++ F +S GL K+ ++ LQ L+ + +I+IP
Sbjct: 424 AKFKKNLRAFYFVHPTFRSKVSTWFFTTFSVS-GLKDKVHHIENLQQLFTCVLPEQIDIP 482
Query: 203 EFVQNHDN 210
FV +D+
Sbjct: 483 PFVLEYDS 490
>sp|Q66H63|GDAP2_RAT Ganglioside-induced differentiation-associated-protein 2 OS=Rattus
norvegicus GN=Gdap2 PE=2 SV=1
Length = 497
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 6/187 (3%)
Query: 25 RPFLSKQQDTEIEEQEQEQWHDCAQYL--SPDEDFSDLDSLQFFCLQGSDKSGNRIFRLV 82
R + + Q +E Q+Q Q + ++L + ED SD+ SL+ G D G + +V
Sbjct: 298 RKLILQGQLSEAALQKQHQ-RNYNRWLCQARSEDLSDIASLKALYQTGVDNCGRTVMVVV 356
Query: 83 GKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELP 142
G+ P ++ ++ Y H + + + +VY HT + E N+ L+ +Y+ +
Sbjct: 357 GRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHLDSDFLKKLYDVVD 414
Query: 143 SRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIP 202
+ K L+ +YF+HP S+++ F +SG L KI +V LQ L++ I +I+ P
Sbjct: 415 IKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVSG-LKDKIHHVDSLQQLFSAISPEQIDFP 473
Query: 203 EFVQNHD 209
FV +D
Sbjct: 474 PFVLEYD 480
>sp|Q5XGM5|GDAP2_XENLA Ganglioside-induced differentiation-associated protein 2 OS=Xenopus
laevis PE=2 SV=1
Length = 496
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 10/166 (6%)
Query: 55 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFC 114
ED SD+ +L+ G D G + +VG+ P ++ E+ Y H + + +
Sbjct: 328 EDLSDIAALKALYQSGVDNCGRSVMVVVGRNIPVLLIDMEKALLYFIH-MMDHVTAKDYV 386
Query: 115 IVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLA---FATVGRF 171
+VY HT + E N+ L+ +Y+ + + K L+ +YF+HP S+++ F T
Sbjct: 387 LVYFHT-LTGEHNHLDSDFLKNMYDIIDVKYKKNLKALYFVHPTFRSKVSTWFFTT---- 441
Query: 172 FLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLEHRPL 217
F GL K+ V L L+ I +IEIP FV ++D E+ PL
Sbjct: 442 FTVSGLKDKVHQVESLHQLFTAIPPEQIEIPPFVLDYD-ARENGPL 486
>sp|Q4R678|GDAP2_MACFA Ganglioside-induced differentiation-associated protein 2 OS=Macaca
fascicularis GN=GDAP2 PE=2 SV=1
Length = 461
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 55 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFC 114
ED SD+ SL+ G D G + +VG+ P ++ ++ Y H + + +
Sbjct: 293 EDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYV 351
Query: 115 IVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLS 174
+VY HT + E N+ L+ +Y+ + + K L+ +YF+HP S+++ F +S
Sbjct: 352 LVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVS 410
Query: 175 GGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLEHRPLTDYGIEPD 225
GL KI +V L L++ I +I+ P FV +D T Y PD
Sbjct: 411 -GLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYDARENGPYYTSYPPSPD 460
>sp|Q9NXN4|GDAP2_HUMAN Ganglioside-induced differentiation-associated protein 2 OS=Homo
sapiens GN=GDAP2 PE=2 SV=1
Length = 497
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 55 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFC 114
ED SD+ SL+ G D G + +VG+ P ++ ++ Y H + + +
Sbjct: 329 EDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYV 387
Query: 115 IVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLS 174
+VY HT + E N+ L+ +Y+ + + K L+ +YF+HP S+++ F +S
Sbjct: 388 LVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVS 446
Query: 175 GGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLEHRPLTDYGIEPD 225
GL KI +V L L++ I +I+ P FV +D T Y PD
Sbjct: 447 -GLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYDARENGPYYTSYPPSPD 496
>sp|Q9DBL2|GDAP2_MOUSE Ganglioside-induced differentiation-associated protein 2 OS=Mus
musculus GN=Gdap2 PE=2 SV=1
Length = 498
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 6/187 (3%)
Query: 25 RPFLSKQQDTEIEEQEQEQWHDCAQYL--SPDEDFSDLDSLQFFCLQGSDKSGNRIFRLV 82
R + + Q +E Q+Q Q + ++L + ED SD+ SL+ G D G + +V
Sbjct: 299 RKLILQGQLSEAALQKQHQ-RNYNRWLCQARSEDLSDIASLKALYQTGVDNCGRTVMVVV 357
Query: 83 GKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELP 142
G+ P ++ ++ Y H + + + +VY HT + + N+ L+ +Y+ +
Sbjct: 358 GRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSDYNHLDSDFLKKLYDVVD 415
Query: 143 SRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIP 202
+ K L+ +YF+HP S+++ F +S GL KI +V LQ L++ I +I+ P
Sbjct: 416 IKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVS-GLKDKIHHVDSLQQLFSAISPEQIDFP 474
Query: 203 EFVQNHD 209
FV +D
Sbjct: 475 PFVLEYD 481
>sp|Q2KIX2|GDAP2_BOVIN Ganglioside-induced differentiation-associated protein 2 OS=Bos
taurus GN=GDAP2 PE=2 SV=1
Length = 497
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 55 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFC 114
ED SD+ SL+ G D G + +VG+ P ++ ++ Y H + + +
Sbjct: 329 EDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYV 387
Query: 115 IVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLS 174
+VY HT + E N+ L+ +Y+ + + K L+ +YF+HP S+++ F +S
Sbjct: 388 LVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVS 446
Query: 175 GGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLEHRPLTDYGIEPD 225
GL KI +V L L++ I +I+ P FV +D T Y PD
Sbjct: 447 -GLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYDARENGPYYTSYLPSPD 496
>sp|A7T167|GDAP2_NEMVE Protein GDAP2 homolog OS=Nematostella vectensis GN=gdap2 PE=3 SV=1
Length = 502
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 55 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFC 114
E+F+D + G D G + V ++F A + Y F + + + +
Sbjct: 331 ENFADFSRQKILYQSGVDFLGRPVVVFVARHFTAQNTDLGKAVAY-FISVLDRIVNRDYV 389
Query: 115 IVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLA---FATVGRF 171
+VY HT E+N P + L+ +Y + ++ + L+ Y +HP +W+R+ F T
Sbjct: 390 VVYFHTH-STEENQPPMSFLKELYHIVDNKYRRNLKAFYIVHPTVWARIVTWFFTT---- 444
Query: 172 FLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHD 209
F + + K+ ++S +QYL++ I +++IP +V +D
Sbjct: 445 FTASSVKEKVHFLSGVQYLYDWINPDQLDIPAYVLEYD 482
>sp|Q54TH9|GACY_DICDI Rho GTPase-activating protein gacY OS=Dictyostelium discoideum
GN=gacY PE=3 SV=1
Length = 721
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 9/165 (5%)
Query: 52 SPDEDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDG 111
S + F ++++L F G D G I ++ + P + ER+ Y I + +
Sbjct: 362 SKSQRFPEIEALNFIYPAGKDNLGRTIIVIIASHLPVREMDMERVLLYTIS-IMDPVVEE 420
Query: 112 PFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRF 171
+ +VY+HT + N P ++ +Y + K L+ +Y +HP W + + +
Sbjct: 421 EYVLVYVHTNMN-NSNKPSMAWMKKVYTIFNRKYKKNLKGLYIVHPTTWIKFTLG-IFKH 478
Query: 172 FLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLEHRP 216
FLS + K+ Y+ L L+ + ++ +P + ++ HRP
Sbjct: 479 FLSSKFWKKLTYIDDLGELFKTFPREQLALP------NAIMMHRP 517
>sp|Q07960|RHG01_HUMAN Rho GTPase-activating protein 1 OS=Homo sapiens GN=ARHGAP1 PE=1
SV=1
Length = 439
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 46 DCAQYLSPDEDFSDLDSLQFFCLQGSDKSGNRIFRLVG-KYFPAPVVGGERLKKYIFHKI 104
+ +L D+ + D+ Q + G DK G +I + P+ + +L Y+ H +
Sbjct: 53 ELVTHLKWDDPYYDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTL 112
Query: 105 CSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLA 164
+ + + ++Y+H + DN P + LR Y E + K ++ +Y +HP ++ +
Sbjct: 113 -DQYVESDYTLLYLHHGL-TSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIK-T 169
Query: 165 FATVGRFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLE 213
+ + +S KI YV+ L L +K ++ IP V +D+ L+
Sbjct: 170 LLILFKPLISFKFGQKIFYVNYLSELSEHVKLEQLGIPRQVLKYDDFLK 218
>sp|Q5FWK3|RHG01_MOUSE Rho GTPase-activating protein 1 OS=Mus musculus GN=Arhgap1 PE=1
SV=1
Length = 439
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Query: 54 DEDFSDLDSLQFFCLQGSDKSGNRIFRLVG-KYFPAPVVGGERLKKYIFHKICSELPDGP 112
D+ + D+ Q + G DK G +I + P+ + +L Y+ H + + +
Sbjct: 61 DDPYYDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTL-DQYVESD 119
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ ++Y+H + DN P + LR Y E + K ++ +Y +HP ++ + + +
Sbjct: 120 YTLLYLHHGL-TSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIK-TLLILFKPL 177
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLE 213
+S KI YV+ L L +K ++ IP V +D+ L+
Sbjct: 178 ISFKFGRKIFYVNYLSELSEHVKLEQLGIPRQVLKYDDFLK 218
>sp|Q9VTU3|RG68F_DROME Rho GTPase-activating protein 68F OS=Drosophila melanogaster
GN=RhoGAP68F PE=1 SV=1
Length = 476
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 70 GSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELP--DGPFCIVYMHTCVQKEDN 127
G+DK G IF + FP +L+ ++ I P + + +VY H + KEDN
Sbjct: 105 GTDKQGRHIFGIYASRFPE----KSQLEGFVREIIKEIEPFVENDYILVYFHQGL-KEDN 159
Query: 128 YPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRL 187
P L Y+EL + L+ +Y +HP + R+ + F+S K+ Y+S L
Sbjct: 160 KPSAQFLWNSYKELDRNFRKNLKTLYVVHPTWFIRVIWNFFSP-FISDKFRKKLVYISSL 218
Query: 188 QYLWNDIKKGEIEIPEFVQNHDNVL 212
L + ++++P+ + + D+ L
Sbjct: 219 DELRQALGLNKLKLPDNICDLDDKL 243
>sp|Q54PT1|GDAP2_DICDI Protein GDAP2 homolog OS=Dictyostelium discoideum GN=gdap2 PE=3
SV=1
Length = 568
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 2/191 (1%)
Query: 9 DDLSVMVLASDLGIDARPFLSKQQDTEIEEQEQEQWHDCAQYLSPDEDFSDLDSLQFFCL 68
D+ S M+ D I+ R SK+ + +IE ++ + S ED SD+ L F L
Sbjct: 353 DNDSFMLKREDPDIEKRRQFSKKSEKQIENEKLKAQFQTLLTRSKVEDLSDVSRLN-FTL 411
Query: 69 QGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNY 128
Q +D I ++G + +++ Y+ + + G F I+Y H+ + + +
Sbjct: 412 QTTDDQNRPIVVIIGSQLNSRKDLYDQVLLYLIRVLEQTIQRGNFSIIYFHSNMSSQQS- 470
Query: 129 PGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQ 188
P + L+ + E + N L+ +HP + G+ KI Y +
Sbjct: 471 PDLSWLKKLLEIFELKYNNYLKDFNIVHPTFLLKTTLFISKSILGDKGVLSKIIYHENMN 530
Query: 189 YLWNDIKKGEI 199
+ I K I
Sbjct: 531 KISKLISKCNI 541
>sp|Q9CXP4|RHG08_MOUSE Rho GTPase-activating protein 8 OS=Mus musculus GN=Arhgap8 PE=2
SV=3
Length = 425
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 51 LSPDEDFSDLDSLQFFCLQGSDKSGNRIFRL-VGKYFPAPVVGGERLKKYIFHKICSELP 109
LS F D+ + G D+ G RIF + P + +RL +Y+ + + +
Sbjct: 8 LSTSHPFYDVARHGILQVAGDDRQGRRIFTFSCCRLPPLHQLNHQRLLEYLKYTLDQHV- 66
Query: 110 DGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVG 169
+ + IVY H + + N P L+ Y+E + K L+ +Y +HP + A +
Sbjct: 67 ENDYTIVYFHYGLSSQ-NKPSLGWLQNTYKEFDRKYKKNLKALYVVHPTSLIK-ALWNIF 124
Query: 170 RFFLSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLEH 214
+ +S K+ Y S L+ L ++ ++ IP V +D L++
Sbjct: 125 KPLISHKFGKKVTYCSNLRELREHLQCDQLLIPPEVVRYDEKLQN 169
>sp|Q5BJR4|PRUN2_RAT Protein prune homolog 2 OS=Rattus norvegicus GN=Prune2 PE=2 SV=1
Length = 322
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ IVY++ + PG ++ Y+ + R++ L+ +HP + R A V R F
Sbjct: 193 YMIVYLNGATPRR-KMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILA-VTRPF 250
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHD 209
+S KIKYVS L L I I IPE + +D
Sbjct: 251 ISSKFSSKIKYVSSLSELSGLIPMDCIHIPESIIKYD 287
>sp|Q52KR3|PRUN2_MOUSE Protein prune homolog 2 OS=Mus musculus GN=Prune2 PE=2 SV=2
Length = 3084
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ IVY++ + PG ++ Y+ + R++ L+ +HP + R A V R F
Sbjct: 2942 YMIVYLNGATPRR-KMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILA-VTRPF 2999
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHD 209
+S KIKYV+ L L I I IPE + +D
Sbjct: 3000 ISSKFSSKIKYVTSLSELSGLIPMDCIHIPESIIKYD 3036
>sp|Q0IHU9|PRUN2_XENTR Protein prune homolog 2 OS=Xenopus tropicalis GN=Prune2 PE=2 SV=1
Length = 316
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ +VY++ + PG ++ Y+ + R++ L+ +HP + R A + R F
Sbjct: 187 YMVVYLNGATPRR-KMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILA-LTRPF 244
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLEHRPLTDYGIEPDHLHLPEV 232
+S KIKYVS L L I + IPE + D L G P+ PE+
Sbjct: 245 ISSKFSSKIKYVSTLAELSELIPMEYVHIPETIVKLDEELRESESPKAGCLPNE---PEM 301
Query: 233 PNMAYSFGRHDGN 245
+ F G+
Sbjct: 302 NTLEEEFENKMGD 314
>sp|Q8WUY3|PRUN2_HUMAN Protein prune homolog 2 OS=Homo sapiens GN=PRUNE2 PE=1 SV=3
Length = 3088
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ IVY++ + PG ++ Y+ + R++ L+ +HP + R A V R F
Sbjct: 2958 YMIVYLNGATPRR-RMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILA-VTRPF 3015
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVL 212
+S KIKYV+ L L I I IPE + D L
Sbjct: 3016 ISSKFSSKIKYVNSLSELSGLIPMDCIHIPESIIKLDEEL 3055
>sp|Q12982|BNIP2_HUMAN BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 OS=Homo
sapiens GN=BNIP2 PE=1 SV=1
Length = 314
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ IVY++ + P LR Y+++ R++ L+ + +HP + R A V R F
Sbjct: 206 YMIVYLNGATTRR-KMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLA-VTRPF 263
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVLEHR 215
+S KI+YV L L + + IPE ++ D L +
Sbjct: 264 ISSKFSQKIRYVFNLAELAELVPMEYVGIPECIKQVDQELNGK 306
>sp|Q5R4Q8|PRUN2_PONAB Protein prune homolog 2 OS=Pongo abelii GN=PRUNE2 PE=2 SV=1
Length = 323
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ IVY++ + PG ++ Y+ + R++ L+ +HP + R A R F
Sbjct: 193 YMIVYLNGATPRR-RMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAAT-RPF 250
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVL 212
+S KIKYV+ L L I I IPE + D L
Sbjct: 251 ISSKFSSKIKYVNSLSELSGLIPMDCIHIPESIIKLDEEL 290
>sp|Q9GKT0|ATCAY_MACFA Caytaxin OS=Macaca fascicularis GN=ATCAY PE=2 SV=1
Length = 371
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ IVY++ + PG L+ Y+ + R++ L+ + +HP + R A + R F
Sbjct: 230 YMIVYLNGATPRR-RMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLA-ISRPF 287
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFV 205
+S KI+YV L+ L I ++IP+ V
Sbjct: 288 ISVKFINKIQYVHSLEDLEQLIPMEHVQIPDCV 320
>sp|Q86WG3|ATCAY_HUMAN Caytaxin OS=Homo sapiens GN=ATCAY PE=1 SV=2
Length = 371
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ IVY++ + PG L+ Y+ + R++ L+ + +HP + R A + R F
Sbjct: 230 YMIVYLNGATPRR-RMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLA-ISRPF 287
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFV 205
+S KI+YV L+ L I ++IP+ V
Sbjct: 288 ISVKFINKIQYVHSLEDLEQLIPMEHVQIPDCV 320
>sp|O54940|BNIP2_MOUSE BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 OS=Mus
musculus GN=Bnip2 PE=1 SV=2
Length = 326
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ I+Y++ + P LR Y+++ R++ L+ + +HP + R A V R F
Sbjct: 206 YMIIYLNGATTRR-KMPSLGWLRRCYQQIDRRLRKNLKSLIIVHPSWFIRTLLA-VTRPF 263
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHD 209
+S KI+YV L L + + IPE ++ ++
Sbjct: 264 ISSKFSQKIRYVFNLAELAELVPMEYVGIPECIKQYE 300
>sp|Q8BHE3|ATCAY_MOUSE Caytaxin OS=Mus musculus GN=Atcay PE=1 SV=1
Length = 372
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ IVY++ + PG L+ Y + R++ L+ + +HP + R A + R F
Sbjct: 230 YMIVYLNGATPRR-RMPGIGWLKKCYHMIDRRLRKNLKSLIIVHPSWFIRTVLA-ISRPF 287
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFV 205
+S KI+YV L+ L I +++P+ V
Sbjct: 288 ISVKFISKIQYVHSLEELERLIPMEHVQLPDCV 320
>sp|Q1M168|ATCAY_RAT Caytaxin OS=Rattus norvegicus GN=Atcay PE=1 SV=1
Length = 372
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ IVY++ + PG L+ Y + R++ L+ + +HP + R A + R F
Sbjct: 230 YMIVYLNGATPRR-RMPGIGWLKKCYHMIDRRLRKNLKSLIIVHPSWFIRTVLA-ISRPF 287
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFV 205
+S KI+YV L+ L I +++P V
Sbjct: 288 ISVKFISKIQYVHSLEELEQLIPMEHVQLPACV 320
>sp|Q99JU7|BNIPL_MOUSE Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein
OS=Mus musculus GN=Bnipl PE=2 SV=1
Length = 328
Score = 39.7 bits (91), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 129 PGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFFLSGGLYWKIKYVSRLQ 188
P + +R Y L R++ L+ + +H W AF + R F+S KI+++ L
Sbjct: 240 PPLSWIRQCYRTLDRRLRKNLRALVVVH-ATWYVKAFLALVRPFISSKFTRKIRFLDSLG 298
Query: 189 YLWNDIKKGEIEIPEFVQNHDNVL 212
L I ++ IPE V+ D L
Sbjct: 299 ELAQLISLEQVHIPEVVRQLDRDL 322
>sp|Q7Z465|BNIPL_HUMAN Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein
OS=Homo sapiens GN=BNIPL PE=1 SV=1
Length = 357
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSRLAFATVGRFF 172
+ +V++ + P + +R Y L R++ L+ + +H W AF + R F
Sbjct: 254 YLLVHLSGGTSRA-QVPPLSWIRQCYRTLDRRLRKNLRALVVVH-ATWYVKAFLALLRPF 311
Query: 173 LSGGLYWKIKYVSRLQYLWNDIKKGEIEIPEFVQNHDNVL 212
+S KI+++ L L I ++ IPE V+ D L
Sbjct: 312 ISSKFTRKIRFLDSLGELAQLISLDQVHIPEAVRQLDRDL 351
>sp|P97526|NF1_RAT Neurofibromin OS=Rattus norvegicus GN=Nf1 PE=1 SV=1
Length = 2820
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 55 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELP--DGP 112
E+F L +L F G+ K+GN IF V + F + G+ L I+H + + P P
Sbjct: 1563 EEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLL---IYHVLLTLKPYYAKP 1619
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSR 162
+ IV T + + + +W + P + + +Y + W R
Sbjct: 1620 YEIVVDLTHTGPSNRFKTDFLSKW-FVVFPGFAYDNVSAVYIYNCNSWVR 1668
>sp|Q9URV2|APC1_SCHPO Anaphase-promoting complex subunit 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cut4 PE=1 SV=1
Length = 1458
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 94 ERLKKYIFHKICSELPDGPFCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMY 153
E ++ I K C P G CI++ + E+ P W EEL R+ NRL +
Sbjct: 597 EMVRLGISRKRCERYPFGILCIIFTVLEIAAEEYSPN-----WESEEL--RLVNRLDVDS 649
Query: 154 FIHP 157
F+HP
Sbjct: 650 FLHP 653
>sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2
Length = 2839
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 55 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELP--DGP 112
E+F L +L F G+ K+GN IF V + F + G+ L I+H + + P P
Sbjct: 1582 EEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLL---IYHVLLTLKPYYAKP 1638
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSR 162
+ IV T + + + +W + P + + +Y + W R
Sbjct: 1639 YEIVVDLTHTGPSNRFKTDFLSKW-FVVFPGFAYDNVSAVYIYNCNSWVR 1687
>sp|Q04690|NF1_MOUSE Neurofibromin OS=Mus musculus GN=Nf1 PE=1 SV=1
Length = 2841
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 55 EDFSDLDSLQFFCLQGSDKSGNRIFRLVGKYFPAPVVGGERLKKYIFHKICSELP--DGP 112
E+F L +L F G+ K+GN IF V + F + G+ L I+H + + P P
Sbjct: 1584 EEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLL---IYHVLLTLKPYYAKP 1640
Query: 113 FCIVYMHTCVQKEDNYPGFTILRWIYEELPSRIKNRLQIMYFIHPGLWSR 162
+ IV T + + + +W + P + + +Y + W R
Sbjct: 1641 YEIVVDLTHTGPSNRFKTDFLSKW-FVVFPGFAYDNVSAVYIYNCNSWVR 1689
>sp|Q06407|RGA2_YEAST Rho-type GTPase-activating protein 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RGA2 PE=1 SV=1
Length = 1009
Score = 32.7 bits (73), Expect = 2.5, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Query: 34 TEIEEQEQEQWHD-------CAQYLSPDEDFSDLDSLQFFCLQGSDKSGN 76
+++ E E ++WHD C + L+ D DF LD C SDK N
Sbjct: 23 SQVYELESKKWHDQCFTCYKCDKKLNADSDFLVLDIGTLICYDCSDKCTN 72
>sp|Q63514|C4BPA_RAT C4b-binding protein alpha chain OS=Rattus norvegicus GN=C4bpa PE=2
SV=1
Length = 558
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 61 DSLQFFCLQGSDKSGNRIFRLV--GKYFPAPVVGGERLKKYIFHKICSELPDGPFCIVYM 118
DS++F C +G G+ + G + P PV C+++PD P +
Sbjct: 226 DSVRFVCQKGFVLRGSGVIHCEADGSWSPVPVCELNS---------CTDIPDIPNAALIT 276
Query: 119 HTCVQKEDNYPGFTILRWI 137
+KED YP T+LR+I
Sbjct: 277 SPRPRKEDVYPVGTVLRYI 295
>sp|A6VL60|ATPD_ACTSZ ATP synthase subunit delta OS=Actinobacillus succinogenes (strain
ATCC 55618 / 130Z) GN=atpH PE=3 SV=1
Length = 176
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 14/81 (17%)
Query: 18 SDLGIDARPFLSKQQDTEIEEQEQEQWHDCAQYL---SPDEDFSDL-----------DSL 63
S+L ARP+ D +E+ E+WH+ ++ + DE D++
Sbjct: 2 SELTTIARPYAKAAFDFAVEQSAVEKWHEMLAFIAEVAKDEQIQQFLTSSLSPEKVADTV 61
Query: 64 QFFCLQGSDKSGNRIFRLVGK 84
C + DKSG + RL+ +
Sbjct: 62 ISICGEHLDKSGQNLIRLMAE 82
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.142 0.461
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,977,201
Number of Sequences: 539616
Number of extensions: 4928841
Number of successful extensions: 9649
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 9603
Number of HSP's gapped (non-prelim): 42
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)