BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025384
(253 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TFY|A Chain A, Naa50p Amino-Terminal Acetyltransferase Bound To Substrate
Peptide Fragment And Coa
pdb|3TFY|B Chain B, Naa50p Amino-Terminal Acetyltransferase Bound To Substrate
Peptide Fragment And Coa
pdb|3TFY|C Chain C, Naa50p Amino-Terminal Acetyltransferase Bound To Substrate
Peptide Fragment And Coa
Length = 169
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 23/152 (15%)
Query: 17 IRPSDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTAR 76
+ P ++ L++L+ FP+ Y +F+++V+ ++ A+
Sbjct: 11 VTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGEL-----------------------AK 47
Query: 77 IVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCR 136
+ N+ +G + +Q +YI+TLG + YR LGI + +++ V+ T
Sbjct: 48 LAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFD 107
Query: 137 ALYLHVISYNIPAIHLYKKMSFKCVRRLHGFY 168
+YLHV N AI Y+K F+ + +Y
Sbjct: 108 NIYLHVQISNESAIDFYRKFGFEIIETKKNYY 139
>pdb|2OB0|A Chain A, Human Mak3 Homolog In Complex With Acetyl-Coa
pdb|2OB0|B Chain B, Human Mak3 Homolog In Complex With Acetyl-Coa
pdb|2OB0|C Chain C, Human Mak3 Homolog In Complex With Acetyl-Coa
pdb|2PSW|A Chain A, Human Mak3 Homolog In Complex With Coa
pdb|2PSW|B Chain B, Human Mak3 Homolog In Complex With Coa
pdb|2PSW|C Chain C, Human Mak3 Homolog In Complex With Coa
Length = 170
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 17 IRPSDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTAR 76
+ P ++ L++L+ FP+ Y +F+++V+ ++ A+
Sbjct: 12 VTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGEL-----------------------AK 48
Query: 77 IVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCR 136
+ N+ +G + +Q +YI TLG + YR LGI + ++ V+ T
Sbjct: 49 LAYFNDIAVGAVCCRVDHSQNQKRLYIXTLGCLAPYRRLGIGTKXLNHVLNICEKDGTFD 108
Query: 137 ALYLHVISYNIPAIHLYKKMSFKCVRRLHGFY 168
+YLHV N AI Y+K F+ + +Y
Sbjct: 109 NIYLHVQISNESAIDFYRKFGFEIIETKKNYY 140
>pdb|2X7B|A Chain A, Crystal Structure Of The N-Terminal Acetylase Ard1 From
Sulfolobus Solfataricus P2
Length = 168
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 102 YILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCV 161
+++++ V++ YR GIA++L+ +K N +YL V N PAI LY+K++FK V
Sbjct: 89 HVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKLNFKKV 148
Query: 162 RRLHGFYLINGQHYDSYL 179
+ L G+Y +G+ D+YL
Sbjct: 149 KVLKGYY-ADGE--DAYL 163
>pdb|2AE6|A Chain A, Crystal Structure Of Acetyltransferase Of Gnat Family From
Enterococcus Faecalis V583
pdb|2AE6|B Chain B, Crystal Structure Of Acetyltransferase Of Gnat Family From
Enterococcus Faecalis V583
pdb|2AE6|C Chain C, Crystal Structure Of Acetyltransferase Of Gnat Family From
Enterococcus Faecalis V583
pdb|2AE6|D Chain D, Crystal Structure Of Acetyltransferase Of Gnat Family From
Enterococcus Faecalis V583
Length = 166
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 102 YILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCV 161
++L++GV +++ GI SL+S IK + I L L V + N AI Y+K F
Sbjct: 83 WLLSIGVSPDFQDQGIGGSLLS-YIKDXAEISGIHKLSLRVXATNQEAIRFYEKHGFVQE 141
Query: 162 RRLHGFYLINGQHYDSYLFVYYIN 185
+ ING + D Y + Y+I
Sbjct: 142 AHFKEEFYINGHYCDDYQYAYFIE 165
>pdb|2VI7|A Chain A, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
pdb|2VI7|B Chain B, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
pdb|2VI7|C Chain C, Structure Of A Putative Acetyltransferase (Pa1377)from
Pseudomonas Aeruginosa
Length = 177
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 104 LTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163
+ +GV ++ G+ S L+ E++ A N R + L V + N PA+ LY+K F+
Sbjct: 89 IGMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGE 148
Query: 164 LHGFYLINGQHYDSY 178
+ + + +G+ D Y
Sbjct: 149 MRDYAVRDGRFVDVY 163
>pdb|2I79|A Chain A, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|B Chain B, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|C Chain C, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|D Chain D, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|E Chain E, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
pdb|2I79|F Chain F, The Crystal Structure Of The Acetyltransferase Of Gnat
Family From Streptococcus Pneumoniae
Length = 172
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 112 YRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCV-RRLHGFYLI 170
Y N G+ S L+ E I++A R L L V + N A+HLY+K F + G Y+
Sbjct: 98 YWNNGLGSLLLEEAIEWAQASGILRRLQLTVQTRNQAAVHLYQKHGFVIEGSQERGAYIE 157
Query: 171 NGQHYDSYLF 180
G+ D YL
Sbjct: 158 EGKFIDVYLM 167
>pdb|3LD2|A Chain A, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|B Chain B, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|C Chain C, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|D Chain D, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
Length = 197
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 72 FVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLG--VVDTYRNLGIASSLISEVIKYA 129
F+ A+I + +I +L Y S + +I+T G V + R GI +L+ +
Sbjct: 83 FLVAKI----KDKIVGVLDYSSLYPFPSGQHIVTFGIAVAEKERRKGIGRALVQIFLNEV 138
Query: 130 SNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVY 182
+ + + +HV+S N A+ YKK+ F RL + + GQ+ D ++ Y
Sbjct: 139 KS--DYQKVLIHVLSSNQEAVLFYKKLGFDLEARLTKQFFLKGQYVDDLIYSY 189
>pdb|3EG7|A Chain A, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|B Chain B, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|C Chain C, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|D Chain D, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|E Chain E, Spermidine N1-Acetyltransferase From Vibrio Cholerae
pdb|3EG7|F Chain F, Spermidine N1-Acetyltransferase From Vibrio Cholerae
Length = 176
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 116 GIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHY 175
G A +LI+ + Y+ I +YLHV N A+HLY++ F L + ING++
Sbjct: 100 GFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGHLVEEFFINGRYQ 159
Query: 176 D 176
D
Sbjct: 160 D 160
>pdb|1BO4|A Chain A, Crystal Structure Of A Gcn5-Related N-Acetyltransferase:
Serratia Marescens Aminoglycoside 3-N-Acetyltransferase
pdb|1BO4|B Chain B, Crystal Structure Of A Gcn5-Related N-Acetyltransferase:
Serratia Marescens Aminoglycoside 3-N-Acetyltransferase
Length = 168
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 25/124 (20%)
Query: 38 ESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSD 97
+S++ N++ ++ ++ A D+ E+ +G L +Y K +
Sbjct: 63 DSDYLGNLLRSKTFIALAAFDQ----------------------EAVVGALAAYVLPKFE 100
Query: 98 Q--TLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK 155
Q + +YI L V +R GIA++LI+ ++K+ +N +Y+ + PA+ LY K
Sbjct: 101 QPRSEIYIYDLAVSGEHRRQGIATALIN-LLKHEANALGAYVIYVQADYGDDPAVALYTK 159
Query: 156 MSFK 159
+ +
Sbjct: 160 LGIR 163
>pdb|3BJ7|A Chain A, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ7|B Chain B, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ7|C Chain C, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ7|D Chain D, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|A Chain A, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|B Chain B, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|C Chain C, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|D Chain D, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
Length = 171
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 62 PNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSL 121
P GHS ++GF A + IG LL Y+ V+ YR GI S +
Sbjct: 66 PEGHS--IVGF--AMYYFTYDPWIGKLL------------YLEDFFVMSDYRGFGIGSEI 109
Query: 122 ISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK 155
+ + + A C +++ V +N P+I+ YK+
Sbjct: 110 LKNLSQVAMKC-RCSSMHFLVAEWNEPSINFYKR 142
>pdb|3EC4|A Chain A, Crystal Structure Of Putative Acetyltransferase From The
Gnat Family (yp_497011.1) From Novosphingobium
Aromaticivorans Dsm 12444 At 1.80 A Resolution
pdb|3EC4|B Chain B, Crystal Structure Of Putative Acetyltransferase From The
Gnat Family (yp_497011.1) From Novosphingobium
Aromaticivorans Dsm 12444 At 1.80 A Resolution
Length = 228
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 112 YRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVR 162
YR G+A+ LI +VI A YLH + N AI LY+ + F+ R
Sbjct: 169 YRGRGLAARLIRKVI--AGXAARGEVPYLHSYASNASAIRLYESLGFRARR 217
>pdb|2GE3|A Chain A, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
pdb|2GE3|B Chain B, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
pdb|2GE3|C Chain C, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
pdb|2GE3|D Chain D, Crystal Structure Of Probable Acetyltransferase From
Agrobacterium Tumefaciens
Length = 170
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 104 LTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163
L G++ YRN G+ + L + A R + L V + N AI LY+K+ F R
Sbjct: 89 LGXGILPAYRNKGLGARLXRRTLDAAHEFGLHR-IELSVHADNARAIALYEKIGFAHEGR 147
Query: 164 LHGFYLINGQHYDS 177
I+G + DS
Sbjct: 148 ARDAVSIDGHYIDS 161
>pdb|2JEV|A Chain A, Crystal Structure Of Human Spermine,Spermidine
Acetyltransferase In Complex With A Bisubstrate Analog
(N1- Acetylspermine-S-Coa).
pdb|2JEV|B Chain B, Crystal Structure Of Human Spermine,Spermidine
Acetyltransferase In Complex With A Bisubstrate Analog
(N1- Acetylspermine-S-Coa)
Length = 174
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 62 PNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSL 121
P GHS ++GF A + IG LL Y+ V+ YR GI S +
Sbjct: 69 PEGHS--IVGF--AMYYFTYDPWIGKLL------------YLEDFFVMSDYRGFGIGSEI 112
Query: 122 ISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK 155
+ + + A C +++ V +N P+I+ YK+
Sbjct: 113 LKNLSQVAMRC-RCSSMHFLVAEWNEPSINFYKR 145
>pdb|2FXF|A Chain A, Human SpermidineSPERMINE N1-Acetyltransferase
pdb|2FXF|B Chain B, Human SpermidineSPERMINE N1-Acetyltransferase
Length = 170
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 62 PNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSL 121
P GHS ++GF A + IG LL Y+ V+ YR GI S +
Sbjct: 65 PEGHS--IVGF--AMYYFTYDPWIGKLL------------YLEDFFVMSDYRGFGIGSEI 108
Query: 122 ISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK 155
+ + + A C +++ V +N P+I+ YK+
Sbjct: 109 LKNLSQVAMRC-RCSSMHFLVAEWNEPSINFYKR 141
>pdb|2F5I|A Chain A, X-Ray Structure Of SpermidineSPERMINE N1-Acetyltransferase
(Sat) From Homo Sapiens
pdb|2F5I|B Chain B, X-Ray Structure Of SpermidineSPERMINE N1-Acetyltransferase
(Sat) From Homo Sapiens
pdb|2G3T|A Chain A, Crsytal Structure Of Human SpermidineSPERMINE N1-
Acetyltransferase (Hssat)
pdb|2G3T|B Chain B, Crsytal Structure Of Human SpermidineSPERMINE N1-
Acetyltransferase (Hssat)
Length = 179
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 62 PNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSL 121
P GHS ++GF A + IG LL Y+ V+ YR GI S +
Sbjct: 66 PEGHS--IVGF--AMYYFTYDPWIGKLL------------YLEDFFVMSDYRGFGIGSEI 109
Query: 122 ISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK 155
+ + + A C +++ V +N P+I+ YK+
Sbjct: 110 LKNLSQVAMRC-RCSSMHFLVAEWNEPSINFYKR 142
>pdb|2BEI|A Chain A, X-Ray Structure Of Thialysine N-Acetyltransferase (Ssat2)
From Homo Sapiens
pdb|2BEI|B Chain B, X-Ray Structure Of Thialysine N-Acetyltransferase (Ssat2)
From Homo Sapiens
pdb|2Q4V|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Thialysine N- Acetyltransferase (Ssat2) From Homo
Sapiens
pdb|2Q4V|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Thialysine N- Acetyltransferase (Ssat2) From Homo
Sapiens
Length = 170
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 101 VYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKC 160
+Y+ + V YR GI S +I +V + A + C L V+ +N A LYK + +
Sbjct: 89 IYLEDIYVXPEYRGQGIGSKIIKKVAEVALD-KGCSQFRLAVLDWNQRAXDLYKALGAQD 147
Query: 161 VRRLHG--FYLINGQ 173
+ G F+ G+
Sbjct: 148 LTEAEGWHFFCFQGE 162
>pdb|2B3U|A Chain A, Human Spermine Spermidine Acetyltransferase K26r Mutant
pdb|2B3U|B Chain B, Human Spermine Spermidine Acetyltransferase K26r Mutant
pdb|2B3V|A Chain A, Spermine Spermidine Acetyltransferase In Complex With
Acetylcoa, K26r Mutant
pdb|2B4B|A Chain A, Ssat+coa+be-3-3-3, K6r Mutant
pdb|2B4B|B Chain B, Ssat+coa+be-3-3-3, K6r Mutant
pdb|2B58|A Chain A, Ssat With Coa_sp, Spermine Disordered, K26r Mutant
Length = 171
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 62 PNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSL 121
P GHS ++GF A + IG LL Y+ V YR GI S +
Sbjct: 66 PEGHS--IVGF--AXYYFTYDPWIGKLL------------YLEDFFVXSDYRGFGIGSEI 109
Query: 122 ISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK 155
+ + + A C + + V +N P+I+ YK+
Sbjct: 110 LKNLSQVAXRC-RCSSXHFLVAEWNEPSINFYKR 142
>pdb|2B4D|A Chain A, Ssat+coa+sp- Sp Disordered
pdb|2B5G|A Chain A, Wild Type Ssat- 1.7a Structure
Length = 171
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 62 PNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSL 121
P GHS ++GF A + IG LL Y+ V YR GI S +
Sbjct: 66 PEGHS--IVGF--AXYYFTYDPWIGKLL------------YLEDFFVXSDYRGFGIGSEI 109
Query: 122 ISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK 155
+ + + A C + + V +N P+I+ YK+
Sbjct: 110 LKNLSQVAXRC-RCSSXHFLVAEWNEPSINFYKR 142
>pdb|2B4D|B Chain B, Ssat+coa+sp- Sp Disordered
pdb|2B5G|B Chain B, Wild Type Ssat- 1.7a Structure
Length = 171
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 62 PNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSL 121
P GHS ++GF A + IG LL Y+ V YR GI S +
Sbjct: 66 PEGHS--IVGF--AXYYFTYDPWIGKLL------------YLEDFFVXSDYRGFGIGSEI 109
Query: 122 ISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK 155
+ + + A C + + V +N P+I+ YK+
Sbjct: 110 LKNLSQVAXRC-RCSSXHFLVAEWNEPSINFYKR 142
>pdb|3C5H|A Chain A, Crystal Structure Of The Ras Homolog Domain Of Human
Grlf1 (P190rhogap)
Length = 255
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 12 ICYRPIRPSDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRS 60
+C R +RPS + H D + S+F VVN + WG V RS
Sbjct: 44 LCNRFVRPS----ADEFHLDHTSVLSTSDFGGRVVNNDHFLYWGEVSRS 88
>pdb|2FE7|A Chain A, The Crystal Structure Of A Probable N-Acetyltransferase
From Pseudomonas Aeruginosa
pdb|2FE7|B Chain B, The Crystal Structure Of A Probable N-Acetyltransferase
From Pseudomonas Aeruginosa
Length = 166
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 101 VYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMS 157
+Y+ L V YR +G L+ E+ + A C L V+ +N PAI Y+ +
Sbjct: 89 IYLEDLYVTPEYRGVGAGRRLLRELAREAV-ANDCGRLEWSVLDWNQPAIDFYRSIG 144
>pdb|1UFH|A Chain A, Structure Of Putative Acetyltransferase, Yycn Protein Of
Bacillus Subtilis
pdb|1UFH|B Chain B, Structure Of Putative Acetyltransferase, Yycn Protein Of
Bacillus Subtilis
Length = 180
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 78 VQANESEI-GDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCR 136
++ NE +I G L + + Q +I G+ + YR G A ++ + + A ++ R
Sbjct: 89 LKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSM-GIR 147
Query: 137 ALYLHVISYNIPAIHLYKKMSFK 159
L LHV ++N A LY++ F+
Sbjct: 148 KLSLHVFAHNQTARKLYEQTGFQ 170
>pdb|1ON0|A Chain A, Crystal Structure Of Putative Acetyltransferase (yycn)
From Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr144
pdb|1ON0|B Chain B, Crystal Structure Of Putative Acetyltransferase (yycn)
From Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr144
pdb|1ON0|C Chain C, Crystal Structure Of Putative Acetyltransferase (yycn)
From Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr144
pdb|1ON0|D Chain D, Crystal Structure Of Putative Acetyltransferase (yycn)
From Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr144
Length = 158
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 78 VQANESEI-GDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCR 136
++ NE +I G L + + Q +I G+ + YR G A ++ + + A + R
Sbjct: 65 LKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSX-GIR 123
Query: 137 ALYLHVISYNIPAIHLYKKMSFK 159
L LHV ++N A LY++ F+
Sbjct: 124 KLSLHVFAHNQTARKLYEQTGFQ 146
>pdb|3TTH|A Chain A, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|B Chain B, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|C Chain C, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|D Chain D, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|E Chain E, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|F Chain F, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|G Chain G, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|H Chain H, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|I Chain I, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|J Chain J, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|K Chain K, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
pdb|3TTH|L Chain L, Structure Of The Spermidine N1-Acetyltransferase (Speg)
From Coxiella Burnetii
Length = 170
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 116 GIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQH 174
G A+ ++YA +I +YL V N A+H+Y+K F +L Y G++
Sbjct: 99 GYATEATDLTVEYAFSILNLHKIYLLVDEDNPAALHIYRKSGFAEEGKLVDEYYSKGRY 157
>pdb|2JLM|A Chain A, Structure Of A Putative Acetyltransferase (Aciad1637) From
Acinetobacter Baylyi Adp1
pdb|2JLM|B Chain B, Structure Of A Putative Acetyltransferase (Aciad1637) From
Acinetobacter Baylyi Adp1
pdb|2JLM|C Chain C, Structure Of A Putative Acetyltransferase (Aciad1637) From
Acinetobacter Baylyi Adp1
pdb|2JLM|D Chain D, Structure Of A Putative Acetyltransferase (Aciad1637) From
Acinetobacter Baylyi Adp1
pdb|2JLM|E Chain E, Structure Of A Putative Acetyltransferase (Aciad1637) From
Acinetobacter Baylyi Adp1
pdb|2JLM|F Chain F, Structure Of A Putative Acetyltransferase (Aciad1637) From
Acinetobacter Baylyi Adp1
Length = 182
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 83 SEIGDLLSYDSAKSDQTL-VYILTLG----VVDTYRNLGIASSLISEVIKYASNIPTCRA 137
+E+G LL + S S + Y T+ + YR LG++ L++E+IK A
Sbjct: 68 NEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVE-SEVHV 126
Query: 138 LYLHVISYNIPAIHLYKKMSF 158
+ + + N+ +I L++K+ F
Sbjct: 127 MVGCIDATNVASIQLHQKLGF 147
>pdb|2UZX|B Chain B, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Crystal Form I
pdb|2UZX|D Chain D, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Crystal Form I
pdb|2UZY|B Chain B, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Low Resolution, Crystal Form Ii
pdb|2UZY|D Chain D, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Low Resolution, Crystal Form Ii
Length = 727
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 32 AFPIRYESEFFQNVVNARDI 51
AFPI+Y ++FF +VN ++
Sbjct: 343 AFPIKYVNDFFNKIVNKNNV 362
>pdb|1SHY|B Chain B, The Crystal Structure Of Hgf Beta-Chain In Complex With
The Sema Domain Of The Met Receptor
Length = 551
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 32 AFPIRYESEFFQNVVNARDI 51
AFPI+Y ++FF +VN ++
Sbjct: 340 AFPIKYVNDFFNKIVNKNNV 359
>pdb|3PP9|A Chain A, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
pdb|3PP9|B Chain B, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
pdb|3PP9|C Chain C, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
Length = 187
Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 102 YILTLGVVDTYRNLGIASSLISEVIKYA--SNIPTCRALYLHVISYNIPAIHLYKKMSF 158
YI + V YR LG+ LI++ ++A N P + L + N+ A Y+K F
Sbjct: 102 YIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNXP---GIXLETQNNNVAACKFYEKCGF 157
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,202,373
Number of Sequences: 62578
Number of extensions: 277792
Number of successful extensions: 574
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 555
Number of HSP's gapped (non-prelim): 30
length of query: 253
length of database: 14,973,337
effective HSP length: 97
effective length of query: 156
effective length of database: 8,903,271
effective search space: 1388910276
effective search space used: 1388910276
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)