Query 025384
Match_columns 253
No_of_seqs 259 out of 1614
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 05:15:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025384.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025384hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10140 putative acetyltransf 99.9 1.1E-20 2.3E-25 143.9 19.6 151 10-182 2-160 (162)
2 PRK09491 rimI ribosomal-protei 99.8 1.2E-19 2.5E-24 136.0 15.9 144 12-184 2-146 (146)
3 COG1247 Sortase and related ac 99.8 2.2E-19 4.8E-24 134.6 16.1 155 12-188 2-168 (169)
4 PRK10809 ribosomal-protein-S5- 99.8 6.3E-19 1.4E-23 138.3 19.3 157 7-184 13-187 (194)
5 PRK15130 spermidine N1-acetylt 99.8 1E-18 2.2E-23 136.2 18.8 155 6-184 1-166 (186)
6 TIGR03827 GNAT_ablB putative b 99.8 2.5E-19 5.4E-24 147.2 16.0 150 9-184 113-266 (266)
7 PF13420 Acetyltransf_4: Acety 99.8 1.9E-18 4.2E-23 130.6 17.7 143 14-179 1-155 (155)
8 PRK10151 ribosomal-protein-L7/ 99.8 2.2E-18 4.7E-23 133.5 17.8 157 6-186 5-178 (179)
9 PRK10146 aminoalkylphosphonic 99.8 2.7E-19 5.9E-24 133.5 12.3 132 10-162 2-137 (144)
10 KOG3139 N-acetyltransferase [G 99.8 4.1E-18 8.9E-23 124.0 16.2 140 20-184 25-164 (165)
11 TIGR01575 rimI ribosomal-prote 99.8 3.1E-18 6.6E-23 125.4 13.4 130 21-179 1-130 (131)
12 KOG3138 Predicted N-acetyltran 99.8 7E-19 1.5E-23 133.5 10.1 165 12-192 17-181 (187)
13 PRK03624 putative acetyltransf 99.8 7.8E-18 1.7E-22 124.6 14.3 127 10-163 1-130 (140)
14 TIGR03585 PseH pseudaminic aci 99.8 8.1E-18 1.7E-22 127.3 14.2 144 13-181 2-156 (156)
15 COG0456 RimI Acetyltransferase 99.7 6.3E-17 1.4E-21 124.9 14.5 145 9-171 9-162 (177)
16 TIGR02382 wecD_rffC TDP-D-fuco 99.7 2.7E-17 6E-22 128.7 12.6 130 10-164 42-186 (191)
17 KOG3235 Subunit of the major N 99.7 2.4E-18 5.3E-23 124.2 5.1 152 12-185 2-154 (193)
18 TIGR02406 ectoine_EctA L-2,4-d 99.7 6.1E-17 1.3E-21 122.7 12.7 125 14-162 1-127 (157)
19 PTZ00330 acetyltransferase; Pr 99.7 3.2E-16 6.9E-21 117.3 16.5 129 11-162 6-140 (147)
20 KOG3216 Diamine acetyltransfer 99.7 4.2E-16 9.1E-21 112.3 15.3 137 9-163 1-146 (163)
21 PF13523 Acetyltransf_8: Acety 99.7 2.7E-16 5.9E-21 118.5 14.3 133 14-165 1-143 (152)
22 PRK10975 TDP-fucosamine acetyl 99.7 2.9E-16 6.2E-21 123.2 14.0 130 11-165 46-190 (194)
23 TIGR03103 trio_acet_GNAT GNAT- 99.7 1.4E-15 3E-20 136.2 17.4 138 9-164 80-218 (547)
24 PLN02706 glucosamine 6-phospha 99.7 2.6E-15 5.7E-20 112.8 15.2 133 9-162 4-143 (150)
25 PRK10514 putative acetyltransf 99.7 1.9E-15 4.2E-20 112.8 13.9 134 12-182 2-143 (145)
26 PF00583 Acetyltransf_1: Acety 99.7 8.2E-16 1.8E-20 103.6 10.4 81 65-159 3-83 (83)
27 PRK09831 putative acyltransfer 99.7 2E-15 4.3E-20 113.2 13.0 129 12-183 1-144 (147)
28 PF13527 Acetyltransf_9: Acety 99.6 3.2E-15 6.9E-20 109.1 12.1 123 13-161 1-127 (127)
29 PRK07922 N-acetylglutamate syn 99.6 4.1E-15 8.9E-20 113.9 12.4 122 10-162 4-126 (169)
30 PHA00673 acetyltransferase dom 99.6 1.1E-14 2.3E-19 107.9 12.9 125 16-162 11-145 (154)
31 PRK07757 acetyltransferase; Pr 99.6 7.3E-15 1.6E-19 110.7 12.0 143 12-197 2-148 (152)
32 TIGR01686 FkbH FkbH-like domai 99.6 1.3E-14 2.9E-19 122.2 14.4 129 9-161 184-319 (320)
33 TIGR03448 mycothiol_MshD mycot 99.6 9.4E-14 2E-18 115.8 16.6 134 9-164 147-289 (292)
34 KOG3234 Acetyltransferase, (GN 99.6 5.6E-15 1.2E-19 106.8 7.5 153 13-188 3-155 (173)
35 PF13673 Acetyltransf_10: Acet 99.6 1E-13 2.2E-18 99.5 14.2 104 21-158 1-117 (117)
36 PRK10562 putative acetyltransf 99.6 9.4E-14 2E-18 103.8 14.3 129 14-182 2-140 (145)
37 PF13302 Acetyltransf_3: Acety 99.6 1E-13 2.2E-18 102.9 14.0 126 12-159 2-142 (142)
38 PRK10314 putative acyltransfer 99.5 2.2E-14 4.8E-19 108.0 7.9 136 14-182 9-148 (153)
39 PRK12308 bifunctional arginino 99.5 7.6E-14 1.7E-18 127.0 11.7 121 9-164 461-585 (614)
40 PF13508 Acetyltransf_7: Acety 99.5 4.5E-13 9.7E-18 89.4 12.2 69 66-160 11-79 (79)
41 TIGR01890 N-Ac-Glu-synth amino 99.5 9.2E-14 2E-18 121.6 10.8 120 11-163 282-405 (429)
42 PHA01807 hypothetical protein 99.5 3.2E-13 6.8E-18 101.1 11.6 119 16-156 8-136 (153)
43 PRK05279 N-acetylglutamate syn 99.5 9.2E-14 2E-18 122.1 9.8 119 12-163 295-417 (441)
44 COG1670 RimL Acetyltransferase 99.5 7.5E-13 1.6E-17 102.5 13.9 159 9-185 7-180 (187)
45 PLN02825 amino-acid N-acetyltr 99.5 1.6E-13 3.5E-18 120.7 10.4 119 12-163 368-490 (515)
46 COG1246 ArgA N-acetylglutamate 99.5 3.7E-13 8E-18 98.3 10.0 118 13-163 2-123 (153)
47 PF13718 GNAT_acetyltr_2: GNAT 99.5 3.5E-12 7.6E-17 98.2 14.5 140 35-185 11-196 (196)
48 TIGR03448 mycothiol_MshD mycot 99.5 1.1E-12 2.5E-17 109.3 12.5 120 15-164 4-129 (292)
49 COG1444 Predicted P-loop ATPas 99.4 7.4E-13 1.6E-17 119.6 11.4 228 10-253 423-683 (758)
50 PRK01346 hypothetical protein; 99.4 2E-12 4.3E-17 112.9 13.5 134 10-167 5-140 (411)
51 COG3153 Predicted acetyltransf 99.4 8.6E-12 1.9E-16 94.0 14.3 148 10-187 2-153 (171)
52 KOG3396 Glucosamine-phosphate 99.4 2.1E-12 4.6E-17 91.3 9.7 133 9-162 4-143 (150)
53 PRK13688 hypothetical protein; 99.3 1.4E-11 2.9E-16 92.8 10.7 115 14-164 20-134 (156)
54 KOG2488 Acetyltransferase (GNA 99.3 1.6E-11 3.4E-16 92.1 9.6 124 20-165 54-184 (202)
55 PF08445 FR47: FR47-like prote 99.3 2E-11 4.4E-16 82.6 8.8 61 101-163 22-82 (86)
56 cd02169 Citrate_lyase_ligase C 99.3 5.3E-11 1.1E-15 98.5 10.8 73 66-165 14-86 (297)
57 COG3981 Predicted acetyltransf 99.2 1.3E-10 2.7E-15 86.2 10.5 136 9-165 1-161 (174)
58 COG3393 Predicted acetyltransf 99.2 3.7E-10 8.1E-15 89.5 11.0 80 66-165 185-264 (268)
59 TIGR00124 cit_ly_ligase [citra 99.1 2.7E-09 5.8E-14 89.8 14.1 81 51-165 31-111 (332)
60 KOG4144 Arylalkylamine N-acety 99.0 4E-10 8.7E-15 81.5 3.9 150 9-164 9-162 (190)
61 KOG4135 Predicted phosphogluco 98.9 7.8E-08 1.7E-12 69.3 12.6 147 9-163 11-170 (185)
62 PF12746 GNAT_acetyltran: GNAT 98.9 5.7E-08 1.2E-12 78.9 12.4 88 52-169 166-253 (265)
63 COG3818 Predicted acetyltransf 98.8 4.5E-08 9.7E-13 69.0 8.5 141 9-164 5-149 (167)
64 KOG3397 Acetyltransferases [Ge 98.8 1.8E-08 4E-13 74.5 6.9 130 8-164 9-142 (225)
65 TIGR01211 ELP3 histone acetylt 98.7 1.4E-07 3.1E-12 83.8 10.8 52 108-163 465-516 (522)
66 COG2153 ElaA Predicted acyltra 98.7 1.9E-08 4.1E-13 72.4 3.7 137 14-182 10-150 (155)
67 PF08444 Gly_acyl_tr_C: Aralky 98.7 9E-08 1.9E-12 63.8 6.2 74 65-162 6-79 (89)
68 cd04301 NAT_SF N-Acyltransfera 98.6 4.1E-07 9E-12 56.7 7.9 58 66-140 7-64 (65)
69 PF12568 DUF3749: Acetyltransf 98.6 9.8E-07 2.1E-11 62.7 9.7 110 16-160 9-122 (128)
70 PF14542 Acetyltransf_CG: GCN5 98.4 1.5E-05 3.3E-10 52.6 10.9 66 66-156 7-72 (78)
71 KOG2036 Predicted P-loop ATPas 98.3 8E-06 1.7E-10 73.1 10.8 115 99-219 613-775 (1011)
72 COG3053 CitC Citrate lyase syn 97.8 0.00045 9.7E-09 56.0 11.7 115 11-167 3-119 (352)
73 COG0454 WecD Histone acetyltra 97.8 3.3E-05 7.1E-10 54.0 4.5 44 106-158 87-130 (156)
74 COG4552 Eis Predicted acetyltr 97.8 8.6E-05 1.9E-09 61.6 7.1 62 97-164 67-128 (389)
75 COG3375 Uncharacterized conser 97.8 0.0015 3.3E-08 50.9 13.2 152 11-185 2-165 (266)
76 COG2388 Predicted acetyltransf 97.8 0.00013 2.7E-09 50.1 6.5 53 66-137 23-75 (99)
77 COG5628 Predicted acetyltransf 97.7 0.00057 1.2E-08 47.8 8.9 76 66-160 45-120 (143)
78 PF01233 NMT: Myristoyl-CoA:pr 97.6 0.0018 3.9E-08 48.1 11.4 110 9-135 21-144 (162)
79 PF00765 Autoind_synth: Autoin 97.6 0.00077 1.7E-08 52.1 9.5 134 18-162 6-154 (182)
80 PF13480 Acetyltransf_6: Acety 97.6 0.0019 4E-08 47.3 10.9 105 11-142 19-135 (142)
81 TIGR03827 GNAT_ablB putative b 97.3 0.0024 5.1E-08 52.6 9.9 67 115-189 20-86 (266)
82 PRK13834 putative autoinducer 97.3 0.0042 9.1E-08 49.0 10.7 135 17-161 13-163 (207)
83 COG3882 FkbH Predicted enzyme 97.3 0.0016 3.4E-08 56.6 8.4 132 9-162 411-549 (574)
84 PF13880 Acetyltransf_13: ESCO 97.2 0.00051 1.1E-08 43.8 4.0 30 100-129 5-34 (70)
85 COG3916 LasI N-acyl-L-homoseri 96.9 0.032 6.9E-07 43.4 11.4 140 14-163 9-163 (209)
86 PF06852 DUF1248: Protein of u 96.8 0.057 1.2E-06 41.5 12.5 124 18-163 11-137 (181)
87 TIGR03694 exosort_acyl putativ 96.7 0.026 5.6E-07 45.7 10.7 139 12-160 8-195 (241)
88 PF04958 AstA: Arginine N-succ 96.5 0.04 8.7E-07 46.5 10.3 142 12-159 2-184 (342)
89 TIGR03019 pepcterm_femAB FemAB 96.5 0.049 1.1E-06 46.3 11.2 126 11-164 151-282 (330)
90 PRK10456 arginine succinyltran 96.4 0.025 5.4E-07 47.6 8.9 108 12-124 2-143 (344)
91 PF05301 Mec-17: Touch recepto 96.2 0.095 2.1E-06 37.0 9.5 52 101-156 47-98 (120)
92 PHA00432 internal virion prote 96.0 0.043 9.4E-07 39.8 7.2 41 121-163 81-121 (137)
93 TIGR03243 arg_catab_AOST argin 95.7 0.068 1.5E-06 44.9 8.1 106 14-124 2-141 (335)
94 TIGR03245 arg_AOST_alph argini 95.7 0.092 2E-06 44.2 8.7 106 14-124 2-142 (336)
95 TIGR03244 arg_catab_AstA argin 95.6 0.071 1.5E-06 44.9 7.9 106 14-124 2-141 (336)
96 COG1243 ELP3 Histone acetyltra 95.3 0.024 5.2E-07 49.2 4.3 51 109-163 459-509 (515)
97 KOG2779 N-myristoyl transferas 94.9 0.33 7.1E-06 40.9 9.6 105 12-132 81-199 (421)
98 cd04264 DUF619-NAGS DUF619 dom 94.9 0.23 5E-06 34.2 7.4 60 66-147 16-75 (99)
99 PF04768 DUF619: Protein of un 94.2 0.73 1.6E-05 35.2 9.5 112 17-160 28-143 (170)
100 KOG3698 Hyaluronoglucosaminida 94.1 0.25 5.5E-06 44.2 7.5 148 10-164 678-879 (891)
101 PF11039 DUF2824: Protein of u 94.1 1.6 3.4E-05 31.5 10.1 103 49-182 36-138 (151)
102 cd04265 DUF619-NAGS-U DUF619 d 93.5 0.51 1.1E-05 32.5 6.8 44 98-147 32-75 (99)
103 PF04377 ATE_C: Arginine-tRNA- 93.4 1 2.2E-05 32.6 8.5 61 65-145 46-106 (128)
104 KOG2535 RNA polymerase II elon 93.3 0.13 2.8E-06 43.2 4.2 50 111-163 498-547 (554)
105 PRK14852 hypothetical protein; 93.2 0.16 3.5E-06 48.8 5.2 162 9-184 26-199 (989)
106 PHA01733 hypothetical protein 93.1 0.17 3.6E-06 37.4 4.2 45 120-164 89-133 (153)
107 PF02799 NMT_C: Myristoyl-CoA: 92.8 3.7 8E-05 31.8 13.0 125 14-160 31-162 (190)
108 PF09390 DUF1999: Protein of u 92.4 3.3 7.1E-05 30.3 10.1 123 12-162 1-140 (161)
109 COG2401 ABC-type ATPase fused 92.4 0.051 1.1E-06 47.0 0.7 62 100-162 241-307 (593)
110 PLN03238 probable histone acet 92.2 0.39 8.5E-06 39.4 5.6 30 103-132 158-187 (290)
111 KOG4601 Uncharacterized conser 92.0 1.5 3.3E-05 34.7 8.3 55 97-155 105-159 (264)
112 KOG2696 Histone acetyltransfer 91.7 1 2.2E-05 38.3 7.6 46 99-146 216-261 (403)
113 PRK01305 arginyl-tRNA-protein 91.6 6.2 0.00013 31.9 12.4 62 65-146 151-212 (240)
114 PF01853 MOZ_SAS: MOZ/SAS fami 91.4 0.33 7.1E-06 37.4 4.1 31 102-132 82-112 (188)
115 COG3138 AstA Arginine/ornithin 90.8 0.65 1.4E-05 38.0 5.4 106 12-122 2-141 (336)
116 PF11124 Pho86: Inorganic phos 90.3 5 0.00011 33.4 10.1 85 66-162 177-270 (304)
117 KOG3014 Protein involved in es 89.7 3.3 7.2E-05 33.3 8.4 33 95-127 178-210 (257)
118 PF13444 Acetyltransf_5: Acety 89.3 1.3 2.8E-05 30.5 5.4 55 68-122 41-100 (101)
119 PTZ00064 histone acetyltransfe 88.4 0.83 1.8E-05 40.4 4.6 30 103-132 387-416 (552)
120 PLN03239 histone acetyltransfe 88.2 1.1 2.3E-05 38.0 5.0 30 103-132 216-245 (351)
121 PF09924 DUF2156: Uncharacteri 87.9 5.3 0.00011 33.4 9.2 107 12-143 133-247 (299)
122 PF04339 DUF482: Protein of un 86.6 4.4 9.5E-05 35.1 8.0 121 11-165 199-331 (370)
123 COG5630 ARG2 Acetylglutamate s 86.5 4.6 0.0001 34.6 7.8 86 20-130 345-431 (495)
124 KOG2779 N-myristoyl transferas 86.1 11 0.00024 32.1 9.7 126 13-160 262-394 (421)
125 PRK04531 acetylglutamate kinas 85.7 5.2 0.00011 35.0 8.1 98 17-153 259-356 (398)
126 PLN00104 MYST -like histone ac 85.6 0.88 1.9E-05 40.0 3.3 30 103-132 309-338 (450)
127 COG5092 NMT1 N-myristoyl trans 85.2 5.2 0.00011 33.4 7.3 104 13-132 83-197 (451)
128 PF02474 NodA: Nodulation prot 73.6 14 0.00031 28.1 5.9 90 99-193 84-185 (196)
129 PF11090 DUF2833: Protein of u 73.5 10 0.00023 25.2 4.6 27 135-161 56-82 (86)
130 PHA02769 hypothetical protein; 70.4 4.2 9.1E-05 28.5 2.3 44 118-164 94-140 (154)
131 COG2935 Putative arginyl-tRNA: 69.3 60 0.0013 26.3 9.2 64 63-146 156-219 (253)
132 PF04816 DUF633: Family of unk 68.8 38 0.00083 26.7 7.8 65 116-182 74-139 (205)
133 KOG2747 Histone acetyltransfer 68.6 11 0.00023 32.7 4.9 30 103-132 263-292 (396)
134 COG2898 Uncharacterized conser 68.2 19 0.00042 32.7 6.6 60 65-143 400-459 (538)
135 COG5027 SAS2 Histone acetyltra 55.4 5.8 0.00013 33.6 1.0 21 103-123 265-285 (395)
136 COG5092 NMT1 N-myristoyl trans 54.6 89 0.0019 26.4 7.6 131 11-160 258-411 (451)
137 COG5653 Protein involved in ce 53.7 1.6E+02 0.0034 25.9 10.3 110 9-145 212-339 (406)
138 cd07235 MRD Mitomycin C resist 49.7 18 0.0004 25.0 2.8 16 147-162 12-27 (122)
139 KOG4387 Ornithine decarboxylas 48.8 1E+02 0.0022 23.7 6.5 77 108-187 107-186 (191)
140 PF07395 Mig-14: Mig-14; Inte 48.0 51 0.0011 27.1 5.3 95 14-132 129-236 (264)
141 COG3473 Maleate cis-trans isom 47.3 42 0.00091 26.6 4.4 31 134-164 117-150 (238)
142 PF12953 DUF3842: Domain of un 47.2 52 0.0011 23.8 4.6 47 111-162 6-52 (131)
143 cd08356 Glo_EDI_BRP_like_17 Th 46.4 24 0.00052 24.3 2.9 22 147-168 13-34 (113)
144 PRK02983 lysS lysyl-tRNA synth 46.1 1.2E+02 0.0026 30.6 8.5 60 65-144 428-487 (1094)
145 cd04266 DUF619-NAGS-FABP DUF61 45.3 1E+02 0.0023 21.5 6.8 49 98-153 37-87 (108)
146 PF00925 GTP_cyclohydro2: GTP 45.2 37 0.00081 25.8 4.0 47 109-165 122-168 (169)
147 COG0807 RibA GTP cyclohydrolas 44.2 51 0.0011 25.7 4.5 50 105-164 119-168 (193)
148 PF13725 tRNA_bind_2: Possible 41.0 5.4 0.00012 27.3 -1.1 46 205-253 3-50 (101)
149 PRK09318 bifunctional 3,4-dihy 40.4 54 0.0012 28.7 4.6 29 134-164 327-355 (387)
150 cd08353 Glo_EDI_BRP_like_7 Thi 40.2 24 0.00051 25.3 2.2 28 135-163 4-31 (142)
151 cd09012 Glo_EDI_BRP_like_24 Th 39.5 24 0.00053 24.6 2.1 16 147-162 12-27 (124)
152 cd08350 BLMT_like BLMT, a bleo 39.5 40 0.00087 23.3 3.2 22 147-168 14-36 (120)
153 PHA00771 head assembly protein 39.4 93 0.002 22.4 4.8 69 108-181 69-137 (151)
154 TIGR00505 ribA GTP cyclohydrol 38.9 75 0.0016 24.7 4.9 46 109-164 121-166 (191)
155 PRK00393 ribA GTP cyclohydrola 38.7 67 0.0014 25.1 4.5 47 108-164 123-169 (197)
156 PF02388 FemAB: FemAB family; 36.8 2.9E+02 0.0064 24.3 9.0 139 21-186 2-160 (406)
157 PRK09319 bifunctional 3,4-dihy 36.3 65 0.0014 29.5 4.6 30 134-165 350-379 (555)
158 PRK00756 acyltransferase NodA; 34.9 2.1E+02 0.0045 21.9 6.8 90 100-192 85-184 (196)
159 TIGR02990 ectoine_eutA ectoine 34.9 73 0.0016 25.8 4.3 42 122-164 108-152 (239)
160 PF02100 ODC_AZ: Ornithine dec 34.1 54 0.0012 22.9 3.0 55 108-163 30-87 (108)
161 PF12681 Glyoxalase_2: Glyoxal 33.0 77 0.0017 21.0 3.8 23 147-169 7-30 (108)
162 PRK14019 bifunctional 3,4-dihy 31.8 75 0.0016 27.6 4.1 28 134-164 335-362 (367)
163 cd08342 HPPD_N_like N-terminal 31.4 84 0.0018 22.4 3.9 27 138-165 4-31 (136)
164 PRK08815 GTP cyclohydrolase; P 31.3 90 0.002 27.2 4.5 29 134-164 312-340 (375)
165 PLN02831 Bifunctional GTP cycl 31.0 87 0.0019 28.0 4.5 29 134-164 380-408 (450)
166 PRK09311 bifunctional 3,4-dihy 30.4 94 0.002 27.4 4.5 29 134-164 346-374 (402)
167 cd03173 DUF619-like DUF619 dom 30.0 1.9E+02 0.004 19.9 7.6 49 98-153 31-79 (98)
168 cd08358 Glo_EDI_BRP_like_21 Th 28.5 66 0.0014 23.1 2.8 20 145-164 12-32 (127)
169 PF13862 BCIP: p21-C-terminal 27.8 2.9E+02 0.0064 21.5 8.8 62 11-76 6-69 (194)
170 COG0623 FabI Enoyl-[acyl-carri 27.7 76 0.0017 25.7 3.2 45 101-145 144-188 (259)
171 PF13380 CoA_binding_2: CoA bi 27.5 86 0.0019 22.0 3.2 43 119-162 65-107 (116)
172 PRK12485 bifunctional 3,4-dihy 27.2 1.1E+02 0.0025 26.5 4.5 29 134-165 338-366 (369)
173 PF02836 Glyco_hydro_2_C: Glyc 26.0 2.2E+02 0.0047 23.6 5.9 69 97-166 11-81 (298)
174 cd08346 PcpA_N_like N-terminal 25.8 1E+02 0.0022 21.0 3.4 18 147-164 13-31 (126)
175 cd00641 GTP_cyclohydro2 GTP cy 24.3 1.7E+02 0.0038 22.7 4.7 46 109-164 123-168 (193)
176 cd08362 BphC5-RrK37_N_like N-t 24.3 1.9E+02 0.004 19.6 4.6 34 134-168 3-37 (120)
177 COG0375 HybF Zn finger protein 24.3 2.1E+02 0.0046 20.3 4.6 38 115-153 4-47 (115)
178 cd07267 THT_Oxygenase_N N-term 24.1 86 0.0019 21.3 2.7 27 137-164 6-32 (113)
179 PRK10150 beta-D-glucuronidase; 23.8 3.4E+02 0.0074 25.3 7.3 68 97-165 288-357 (604)
180 PF03376 Adeno_E3B: Adenovirus 23.7 37 0.00081 21.2 0.7 13 109-121 53-65 (67)
181 PF00903 Glyoxalase: Glyoxalas 23.7 99 0.0021 21.0 3.1 29 136-165 3-32 (128)
182 PRK15312 antimicrobial resista 23.6 1.8E+02 0.0039 24.4 4.7 50 66-132 211-266 (298)
183 COG2384 Predicted SAM-dependen 23.5 3.6E+02 0.0077 21.7 6.2 49 116-164 93-142 (226)
184 PF03588 Leu_Phe_trans: Leucyl 21.8 3.7E+02 0.0081 20.6 8.8 106 19-161 59-171 (173)
185 cd08344 MhqB_like_N N-terminal 21.5 90 0.002 21.2 2.4 18 147-164 14-31 (112)
186 cd07265 2_3_CTD_N N-terminal d 21.5 1.1E+02 0.0024 21.0 2.9 29 135-164 5-34 (122)
187 PRK13690 hypothetical protein; 21.4 3.1E+02 0.0067 21.2 5.2 50 116-166 50-102 (184)
188 COG0346 GloA Lactoylglutathion 21.4 1.2E+02 0.0027 20.3 3.2 30 135-165 3-33 (138)
189 PF14696 Glyoxalase_5: Hydroxy 20.9 44 0.00094 24.6 0.7 31 134-165 9-39 (139)
190 PRK10291 glyoxalase I; Provisi 20.0 1.3E+02 0.0028 21.0 3.0 18 147-164 8-26 (129)
No 1
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.88 E-value=1.1e-20 Score=143.87 Aligned_cols=151 Identities=25% Similarity=0.357 Sum_probs=116.3
Q ss_pred CceEEEeCCCCCHHHHHHHHHccC--C----C-CCcHHHHHHhh-cccceeeeeeeecCCCCCCCCceEEEEEEEEeecC
Q 025384 10 PTICYRPIRPSDLMILQQLHADAF--P----I-RYESEFFQNVV-NARDIVSWGAVDRSRPNGHSDELIGFVTARIVQAN 81 (253)
Q Consensus 10 ~~i~ir~~~~~D~~~l~~l~~~~~--~----~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~ 81 (253)
..+.||+++++|++.+.++..+.- . . ....+.+...+ .......+++.. ++++||++.+....
T Consensus 2 ~~i~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-------~~~~vG~~~~~~~~-- 72 (162)
T PRK10140 2 SEIVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVACI-------DGDVVGHLTIDVQQ-- 72 (162)
T ss_pred CccEEEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEEE-------CCEEEEEEEEeccc--
Confidence 458999999999999999987631 1 1 11223333333 323334455544 78999999887421
Q ss_pred cccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEE
Q 025384 82 ESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCV 161 (253)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~ 161 (253)
.+........+++|+|+|||+|+|++|++.++++++...|++.+.+.|...|.+|++||+|+||+..
T Consensus 73 -------------~~~~~~~~~~~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~ 139 (162)
T PRK10140 73 -------------RPRRSHVADFGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIE 139 (162)
T ss_pred -------------ccccceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHCCCEEE
Confidence 0111222334699999999999999999999999998559999999999999999999999999999
Q ss_pred EEEcceEEeCCeeeeeEEEEE
Q 025384 162 RRLHGFYLINGQHYDSYLFVY 182 (253)
Q Consensus 162 ~~~~~~~~~~g~~~d~~~~~~ 182 (253)
+..+.+...+|++.|.++|.+
T Consensus 140 g~~~~~~~~~~~~~d~~~~~~ 160 (162)
T PRK10140 140 GTGKKYALRNGEYVDAYYMAR 160 (162)
T ss_pred eecccceeeCCeEEEEEEEEe
Confidence 999998888899999999986
No 2
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.84 E-value=1.2e-19 Score=136.00 Aligned_cols=144 Identities=17% Similarity=0.320 Sum_probs=114.2
Q ss_pred eEEEeCCCCCHHHHHHHHHccCCCCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccc
Q 025384 12 ICYRPIRPSDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSY 91 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~ 91 (253)
+.||+++++|++.+.++..+.....|....+.... ......+.... ++++||++.+....
T Consensus 2 ~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~vG~~~~~~~~------------ 61 (146)
T PRK09491 2 NTISSLTPADLPAAYHIEQRAHAFPWSEKTFASNQ-GERYLNLKLTV-------NGQMAAFAITQVVL------------ 61 (146)
T ss_pred cchhcCChhhhHHHHHHHHhcCCCCCCHHHHHHHH-hcCceEEEEEE-------CCeEEEEEEEEeec------------
Confidence 46999999999999999887766666654443322 22333333333 79999999876321
Q ss_pred cCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcceEE-e
Q 025384 92 DSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYL-I 170 (253)
Q Consensus 92 ~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~~~-~ 170 (253)
....+..++|+|+|||+|+|+.+++.+++.+.+. |++.+.+.+...|.++++||+|+||+..+..+.++. .
T Consensus 62 -------~~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~-~~~~~~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~~~~~ 133 (146)
T PRK09491 62 -------DEATLFNIAVDPDYQRQGLGRALLEHLIDELEKR-GVATLWLEVRASNAAAIALYESLGFNEVTIRRNYYPTA 133 (146)
T ss_pred -------CceEEEEEEECHHHccCCHHHHHHHHHHHHHHHC-CCcEEEEEEccCCHHHHHHHHHcCCEEeeeeeccccCC
Confidence 1234678899999999999999999999999887 999999999999999999999999999998888875 4
Q ss_pred CCeeeeeEEEEEEe
Q 025384 171 NGQHYDSYLFVYYI 184 (253)
Q Consensus 171 ~g~~~d~~~~~~~l 184 (253)
+| +.|.++|.+.+
T Consensus 134 ~~-~~d~~~~~~~~ 146 (146)
T PRK09491 134 DG-REDAIIMALPL 146 (146)
T ss_pred CC-ceeEEEEeccC
Confidence 56 89999998753
No 3
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=2.2e-19 Score=134.58 Aligned_cols=155 Identities=19% Similarity=0.242 Sum_probs=126.3
Q ss_pred eEEEeCCCCCHHHHHHHHHccCCCC------C--c----HHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEee
Q 025384 12 ICYRPIRPSDLMILQQLHADAFPIR------Y--E----SEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQ 79 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~~~~~------~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~ 79 (253)
+.||+.+..|++.+.++++...... + + .+|+...... ....+++.. ++|+++|++.+....
T Consensus 2 ~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~-g~p~~V~~~------~~g~v~G~a~~~~fr 74 (169)
T COG1247 2 MEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRD-GYPVVVAEE------EDGKVLGYASAGPFR 74 (169)
T ss_pred cEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccC-CceEEEEEc------CCCeEEEEEEeeecc
Confidence 6799999999999999999865421 1 1 2333333222 234444443 359999999997643
Q ss_pred cCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCE
Q 025384 80 ANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFK 159 (253)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~ 159 (253)
..+........+++|+|++||+|+|++|++++++.+... |+..+...+...|.+|+++++++||+
T Consensus 75 --------------~r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~-g~~~lva~I~~~n~aSi~lh~~~GF~ 139 (169)
T COG1247 75 --------------ERPAYRHTVELSIYLDPAARGKGLGKKLLQALITEARAL-GVRELVAGIESDNLASIALHEKLGFE 139 (169)
T ss_pred --------------CccccceEEEEEEEECcccccccHHHHHHHHHHHHHHhC-CeEEEEEEEcCCCcHhHHHHHHCCCE
Confidence 234456778889999999999999999999999999999 99999999999999999999999999
Q ss_pred EEEEEcceEEeCCeeeeeEEEEEEecCCC
Q 025384 160 CVRRLHGFYLINGQHYDSYLFVYYINGGR 188 (253)
Q Consensus 160 ~~~~~~~~~~~~g~~~d~~~~~~~l~~~~ 188 (253)
..|..++...+.|+|.|..+|.+.++.++
T Consensus 140 ~~G~~~~vg~k~g~wld~~~~~~~l~~~~ 168 (169)
T COG1247 140 EVGTFPEVGDKFGRWLDLVLMQLLLEEGR 168 (169)
T ss_pred EeccccccccccceEEeeeeeehhhcccC
Confidence 99999999889999999999999887653
No 4
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.84 E-value=6.3e-19 Score=138.32 Aligned_cols=157 Identities=15% Similarity=0.210 Sum_probs=119.2
Q ss_pred CCCCceEEEeCCCCCHHHHHHHHHcc--CCCCCc---------H-------HHHHHhhcccceeeeeeeecCCCCCCCCc
Q 025384 7 SRHPTICYRPIRPSDLMILQQLHADA--FPIRYE---------S-------EFFQNVVNARDIVSWGAVDRSRPNGHSDE 68 (253)
Q Consensus 7 ~~~~~i~ir~~~~~D~~~l~~l~~~~--~~~~~~---------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (253)
...+.+.||+++++|++.+.+++.+. +-..|. . .++...........|+... ..+++
T Consensus 13 l~t~rl~LR~~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----~~~~~ 87 (194)
T PRK10809 13 LTTDRLVVRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLD-----PDEKE 87 (194)
T ss_pred eccCcEEEEeCCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEE-----CCCCe
Confidence 45677999999999999999998752 111111 1 1222222233334444433 13679
Q ss_pred eEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHH
Q 025384 69 LIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIP 148 (253)
Q Consensus 69 ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~ 148 (253)
+||.+.+..... ........+++|+|+|||+|+|+++++.+++++++.+|+++|.+.|...|.+
T Consensus 88 ~iG~i~l~~~~~----------------~~~~~~eig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~ 151 (194)
T PRK10809 88 IIGVANFSNVVR----------------GSFHACYLGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKR 151 (194)
T ss_pred EEEEEEEEeecC----------------CCeeeEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHH
Confidence 999999874321 1112245578999999999999999999999999977999999999999999
Q ss_pred HHHHHHhCCCEEEEEEcceEEeCCeeeeeEEEEEEe
Q 025384 149 AIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYI 184 (253)
Q Consensus 149 a~~fy~k~GF~~~~~~~~~~~~~g~~~d~~~~~~~l 184 (253)
|+++|+|+||+.++..++++..+|++.|.++|.+..
T Consensus 152 S~~l~ek~Gf~~~g~~~~~~~~~g~~~d~~~~~~~~ 187 (194)
T PRK10809 152 SGDLLARLGFEKEGYAKDYLLIDGQWRDHVLTALTT 187 (194)
T ss_pred HHHHHHHCCCcEEeeeccccccCCeEEEEEEeeeeh
Confidence 999999999999999998888899999999998753
No 5
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.83 E-value=1e-18 Score=136.22 Aligned_cols=155 Identities=21% Similarity=0.322 Sum_probs=121.3
Q ss_pred CCCCCceEEEeCCCCCHHHHHHHHHccC------CCCCc-----HHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEE
Q 025384 6 VSRHPTICYRPIRPSDLMILQQLHADAF------PIRYE-----SEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVT 74 (253)
Q Consensus 6 ~~~~~~i~ir~~~~~D~~~l~~l~~~~~------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~ 74 (253)
|+.+..+.||+++++|++.+.++..+.. ...+. ..++...........|++.. ++++||++.
T Consensus 1 ~~~~~~l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-------~g~~iG~~~ 73 (186)
T PRK15130 1 MPSAHSVKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVEC-------DGEKAGLVE 73 (186)
T ss_pred CCCCCeeEEecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEE-------CCEEEEEEE
Confidence 5667789999999999999999976531 11111 12333433344445566654 899999998
Q ss_pred EEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHH
Q 025384 75 ARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYK 154 (253)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~ 154 (253)
+..... ....+ ...++|+|+|||+|+|++++..+++++++..|+++|.+.|...|.+|++||+
T Consensus 74 ~~~~~~----------------~~~~~-~~~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~ye 136 (186)
T PRK15130 74 LVEINH----------------VHRRA-EFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYR 136 (186)
T ss_pred EEeecC----------------CCCeE-EEEEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHH
Confidence 764210 11122 3478999999999999999999999999877999999999999999999999
Q ss_pred hCCCEEEEEEcceEEeCCeeeeeEEEEEEe
Q 025384 155 KMSFKCVRRLHGFYLINGQHYDSYLFVYYI 184 (253)
Q Consensus 155 k~GF~~~~~~~~~~~~~g~~~d~~~~~~~l 184 (253)
|+||+.++..++.+..+|++.|.++|...-
T Consensus 137 k~GF~~~~~~~~~~~~~g~~~d~~~~~~~~ 166 (186)
T PRK15130 137 KLGFEVEGELIHEFFINGEYRNTIRMCIFQ 166 (186)
T ss_pred HCCCEEEEEEeheEEECCEEEEEEEEEeeH
Confidence 999999999998888899999999998754
No 6
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.83 E-value=2.5e-19 Score=147.18 Aligned_cols=150 Identities=14% Similarity=0.222 Sum_probs=124.3
Q ss_pred CCceEEEeCCCCCHHHHHHHHHccCCC---CC-cHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCccc
Q 025384 9 HPTICYRPIRPSDLMILQQLHADAFPI---RY-ESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESE 84 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~~l~~l~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~ 84 (253)
.+.+.||+++++|++++.+++.+.|.. .+ .++++...+. .....+++.. ++++||++.+...
T Consensus 113 ~~~~~IR~a~~~D~~~l~~L~~~v~~~~~~~~~~~~~l~~~~~-~~~~~~v~~~-------~g~iVG~~~~~~~------ 178 (266)
T TIGR03827 113 PEGFTLRIATEDDADAMAALYRKVFPTYPFPIHDPAYLLETMK-SNVVYFGVED-------GGKIIALASAEMD------ 178 (266)
T ss_pred CCceEEEECCHHHHHHHHHHHHHHhccCCCCccCHHHHHHHhc-CCcEEEEEEE-------CCEEEEEEEEecC------
Confidence 456899999999999999999887642 22 2455555554 3344555555 8999999876421
Q ss_pred ccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 85 IGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
.....++|..++|+|+|||+|+|++|++.+++++++. |+..+++.+...|.+++++|+|+||+..|+.
T Consensus 179 -----------~~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~-g~~~l~~~~~~~n~~a~~ly~k~GF~~~G~l 246 (266)
T TIGR03827 179 -----------PENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEK-GIRTAYTIARASSYGMNITFARLGYAYGGTL 246 (266)
T ss_pred -----------CCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHC-CCcEEEeehhhcchhHHHHHHHcCCccccEE
Confidence 1234577889999999999999999999999999988 9999999999999999999999999999999
Q ss_pred cceEEeCCeeeeeEEEEEEe
Q 025384 165 HGFYLINGQHYDSYLFVYYI 184 (253)
Q Consensus 165 ~~~~~~~g~~~d~~~~~~~l 184 (253)
++....+|++.|..+|.+.|
T Consensus 247 ~n~~~i~G~~~d~~i~~k~l 266 (266)
T TIGR03827 247 VNNTNISGGFESMNIWYKQL 266 (266)
T ss_pred eecceecCCcccceeeeecC
Confidence 99999999999999998854
No 7
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.82 E-value=1.9e-18 Score=130.55 Aligned_cols=143 Identities=27% Similarity=0.443 Sum_probs=106.7
Q ss_pred EEeCCCCCHHHHHHHHHcc-----CCCC---Cc----HHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecC
Q 025384 14 YRPIRPSDLMILQQLHADA-----FPIR---YE----SEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQAN 81 (253)
Q Consensus 14 ir~~~~~D~~~l~~l~~~~-----~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~ 81 (253)
||+++++|++.+.+|+++. +... .+ ..++...........+.+.. .+|++||++.+....
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~g~iiG~~~~~~~~-- 72 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAE------EDGKIIGYVSLRDID-- 72 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEE------CTTEEEEEEEEEESS--
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEE------cCCcEEEEEEEEeee--
Confidence 7999999999999998752 2222 12 23444443233444555543 389999999998532
Q ss_pred cccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEE
Q 025384 82 ESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCV 161 (253)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~ 161 (253)
+..+ ..+..++|.|++|++|+|+.|+..++++|+...|++++.+.|.+.|.++++||+++||+.+
T Consensus 73 --------------~~~~-~~~~~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~GF~~~ 137 (155)
T PF13420_consen 73 --------------PYNH-TAELSIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKKLGFEEE 137 (155)
T ss_dssp --------------SGTT-EEEEEEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHTTEEEE
T ss_pred --------------ccCC-EEEEeeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhCCCEEE
Confidence 1223 3344688889999999999999999999944449999999999999999999999999999
Q ss_pred EEEcceEEeCCeeeeeEE
Q 025384 162 RRLHGFYLINGQHYDSYL 179 (253)
Q Consensus 162 ~~~~~~~~~~g~~~d~~~ 179 (253)
|..+++...+|+++|.++
T Consensus 138 g~~~~~~~~~~~y~D~~~ 155 (155)
T PF13420_consen 138 GELKDHIFINGKYYDVVW 155 (155)
T ss_dssp EEEEEEEEETTEEEEEEE
T ss_pred EEEecEEEECCeEEEeEC
Confidence 999999999999999764
No 8
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.82 E-value=2.2e-18 Score=133.53 Aligned_cols=157 Identities=17% Similarity=0.174 Sum_probs=119.5
Q ss_pred CCCCCceEEEeCCCCCHHHHHHHHHcc---------CCCC-Cc----HHHHHHhhc---ccceeeeeeeecCCCCCCCCc
Q 025384 6 VSRHPTICYRPIRPSDLMILQQLHADA---------FPIR-YE----SEFFQNVVN---ARDIVSWGAVDRSRPNGHSDE 68 (253)
Q Consensus 6 ~~~~~~i~ir~~~~~D~~~l~~l~~~~---------~~~~-~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 68 (253)
+...+.+.||+++++|++.+.++..+. ++.. .+ .+++..... ......+++.. +++
T Consensus 5 ~~~t~rl~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~-------~~~ 77 (179)
T PRK10151 5 IPVSESLELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFK-------EDE 77 (179)
T ss_pred EEeCCcEEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEE-------CCE
Confidence 334677999999999999999997431 1111 12 234443221 11122455544 789
Q ss_pred eEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHH
Q 025384 69 LIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIP 148 (253)
Q Consensus 69 ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~ 148 (253)
+||++.+.... +....+. .+++|+|+|||+|+|++++..+++++++..|++++.+.+.+.|.+
T Consensus 78 ~iG~~~l~~~~----------------~~~~~~~-ig~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~ 140 (179)
T PRK10151 78 LIGVLSFNRIE----------------PLNKTAY-IGYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPA 140 (179)
T ss_pred EEEEEEEEeec----------------cCCCceE-EEEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHH
Confidence 99999886432 1112233 367899999999999999999999999877899999999999999
Q ss_pred HHHHHHhCCCEEEEEEcceEEeCCeeeeeEEEEEEecC
Q 025384 149 AIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYING 186 (253)
Q Consensus 149 a~~fy~k~GF~~~~~~~~~~~~~g~~~d~~~~~~~l~~ 186 (253)
|+++++|+||+.+|+.++....+|++.|.++|.+.+..
T Consensus 141 S~~v~ek~Gf~~~g~~~~~~~~~g~~~D~~~~~~~~~~ 178 (179)
T PRK10151 141 SNQVALRNGFTLEGCLKQAEYLNGAYDDVNLYARIIDS 178 (179)
T ss_pred HHHHHHHCCCEEEeEeccceEECCEEEEEEEEEEeecC
Confidence 99999999999999999999899999999999987643
No 9
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.81 E-value=2.7e-19 Score=133.51 Aligned_cols=132 Identities=15% Similarity=0.122 Sum_probs=102.2
Q ss_pred CceEEEeCCCCCHHHHHHHHHccCCCCCcH----HHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccc
Q 025384 10 PTICYRPIRPSDLMILQQLHADAFPIRYES----EFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEI 85 (253)
Q Consensus 10 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~ 85 (253)
+++.||+++++|++.+.++..+..+..+.. +.+...+..+....+++.. ++++||++.+.....
T Consensus 2 ~~~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~-------~~~ivG~~~~~~~~~----- 69 (144)
T PRK10146 2 PACELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALL-------DGEVVGMIGLHLQFH----- 69 (144)
T ss_pred CccEEeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEE-------CCEEEEEEEEEeccc-----
Confidence 567899999999999999988766544432 2233444444445555554 899999998864210
Q ss_pred cccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEE
Q 025384 86 GDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVR 162 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~ 162 (253)
.......++|..++|+|++||+|+|++|+..++++|++. |+..+.+.+...|..|++||+++||+..+
T Consensus 70 --------~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~-~~~~i~l~~~~~n~~a~~fY~~~Gf~~~~ 137 (144)
T PRK10146 70 --------LHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQA-GAEMTELSTNVKRHDAHRFYLREGYEQSH 137 (144)
T ss_pred --------ccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHc-CCcEEEEecCCCchHHHHHHHHcCCchhh
Confidence 011122356889999999999999999999999999998 99999999999999999999999998754
No 10
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.80 E-value=4.1e-18 Score=124.02 Aligned_cols=140 Identities=21% Similarity=0.349 Sum_probs=112.8
Q ss_pred CCHHHHHHHHHccCCCCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccccCCCCCCc
Q 025384 20 SDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQT 99 (253)
Q Consensus 20 ~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (253)
.-++.+.++....++.+++.-.............+++.+ .++..||.+.+... ...+..
T Consensus 25 ~~l~~im~Li~k~lsepyS~~tyrYf~~~wp~~~~~a~d------~~~~~VGai~ck~~---------------~~r~~~ 83 (165)
T KOG3139|consen 25 EYLADIMRLIDKDLSEPYSIYTYRYFVPNWPCFCFLALD------EKGDTVGAIVCKLD---------------THRNTL 83 (165)
T ss_pred HHHHHHHHHHhhhcCchhHHHHHHhcccCCceEEEEEEc------CCCceEEEEEEecc---------------ccCCcc
Confidence 334567788888888888766666666666777888876 12227999888641 112256
Q ss_pred EEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcceEEeCCeeeeeEE
Q 025384 100 LVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYL 179 (253)
Q Consensus 100 ~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~~~~~g~~~d~~~ 179 (253)
.++|..++|+++|||+|||++|++.+++.+..+ |+..|.|++...|.+|.++|+++||+..++...||.. | .|++.
T Consensus 84 rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~-g~~eVvLeTe~~n~~A~~LY~sLGF~r~~r~~~YYln-g--~dA~r 159 (165)
T KOG3139|consen 84 RGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSR-GYSEVVLETEVTNLSALRLYESLGFKRDKRLFRYYLN-G--MDALR 159 (165)
T ss_pred eEEEEEEEechhhccccHHHHHHHHHHHHHHHC-CCcEEEEeccccchHHHHHHHhcCceEecceeEEEEC-C--cceEE
Confidence 799999999999999999999999999999999 9999999999999999999999999999998888864 4 38888
Q ss_pred EEEEe
Q 025384 180 FVYYI 184 (253)
Q Consensus 180 ~~~~l 184 (253)
|.+.+
T Consensus 160 l~L~~ 164 (165)
T KOG3139|consen 160 LKLFF 164 (165)
T ss_pred EEeec
Confidence 87754
No 11
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.79 E-value=3.1e-18 Score=125.42 Aligned_cols=130 Identities=25% Similarity=0.384 Sum_probs=106.0
Q ss_pred CHHHHHHHHHccCCCCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccccCCCCCCcE
Q 025384 21 DLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTL 100 (253)
Q Consensus 21 D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (253)
|++++.++..+.|+.+|..+.+...........++... ++++||++.+... ...
T Consensus 1 d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~vg~~~~~~~-------------------~~~ 54 (131)
T TIGR01575 1 DLKAVLEIEAAAFAFPWTEAQFAEELANYHLCYLLARI-------GGKVVGYAGVQIV-------------------LDE 54 (131)
T ss_pred CHHHHHHHHHhhCCCCCCHHHHHHHhcCCCceEEEEec-------CCeEEEEEEEEec-------------------CCC
Confidence 67899999999999888877777776655444454543 7999999987531 123
Q ss_pred EEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcceEEeCCeeeeeEE
Q 025384 101 VYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYL 179 (253)
Q Consensus 101 ~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~~~~~g~~~d~~~ 179 (253)
.++..++|+|+|||+|+|++|++++++++.+. |+..+.+.+.+.|..+++||+++||+.++..+.++..++ .|.++
T Consensus 55 ~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~-~~~~i~~~~~~~n~~~~~~y~~~Gf~~~~~~~~~~~~~~--~~~~~ 130 (131)
T TIGR01575 55 AHILNIAVKPEYQGQGIGRALLRELIDEAKGR-GVNEIFLEVRVSNIAAQALYKKLGFNEIAIRRNYYPDPG--EDAIV 130 (131)
T ss_pred eEEEEEEECHHHcCCCHHHHHHHHHHHHHHHc-CCCeEEEEEecccHHHHHHHHHcCCCccccccccccCCC--ccccc
Confidence 45789999999999999999999999999998 899999999999999999999999999998887764433 45444
No 12
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=99.79 E-value=7e-19 Score=133.51 Aligned_cols=165 Identities=36% Similarity=0.608 Sum_probs=135.3
Q ss_pred eEEEeCCCCCHHHHHHHHHccCCCCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccc
Q 025384 12 ICYRPIRPSDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSY 91 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~ 91 (253)
+.++.+++.|+..+..+..++||..|...|+...+...+...++.. ++..||-+.+............
T Consensus 17 ~~l~~it~~nl~~~~~l~~~~fP~~y~~kfy~~~~~~~~~~~~A~~--------~~~~v~a~~~k~~~~~~~~~r~---- 84 (187)
T KOG3138|consen 17 IELRLITPNNLKQLKQLNEDIFPISYVDKFYPDVLSNGDLTQLAYY--------NEIAVGAVACKLIKFVQNAKRL---- 84 (187)
T ss_pred eeeccCCcchHHHHHHHhccccCcchHHHHHHHHHhcCCHHHhhhh--------ccccccceeeeehhhhhhhhhh----
Confidence 8999999999999999999999999999999999998888888876 4666666666553221111000
Q ss_pred cCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcceEEeC
Q 025384 92 DSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLIN 171 (253)
Q Consensus 92 ~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~~~~~ 171 (253)
......||..++|.++||++|||+.|++.+.+++.+...++.+++|+...|..++.||++.||+++++.+.++...
T Consensus 85 ----~~~~~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~~~~y~~~ 160 (187)
T KOG3138|consen 85 ----FGNRVIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERLKNYYSIL 160 (187)
T ss_pred ----hccceeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeeccccccccc
Confidence 0011589999999999999999999999999999998338999999999999999999999999999999999988
Q ss_pred CeeeeeEEEEEEecCCCCCCC
Q 025384 172 GQHYDSYLFVYYINGGRSPCS 192 (253)
Q Consensus 172 g~~~d~~~~~~~l~~~~~~~~ 192 (253)
+...+.+++....+++.+||.
T Consensus 161 ~~~~~~~l~~~~~~~~~~~~~ 181 (187)
T KOG3138|consen 161 GPPDDSFLRKLLIHGSGSPPT 181 (187)
T ss_pred cCcchhhhhhheecCCCCCCc
Confidence 777777777777776555443
No 13
>PRK03624 putative acetyltransferase; Provisional
Probab=99.78 E-value=7.8e-18 Score=124.60 Aligned_cols=127 Identities=18% Similarity=0.207 Sum_probs=98.7
Q ss_pred CceEEEeCCCCCHHHHHHHHHccCC-CCCc--HHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCccccc
Q 025384 10 PTICYRPIRPSDLMILQQLHADAFP-IRYE--SEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIG 86 (253)
Q Consensus 10 ~~i~ir~~~~~D~~~l~~l~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~ 86 (253)
+.+.||+++++|++.+.++..+.-. ..|. ...+...........+++.. ++++||++.+..
T Consensus 1 ~~~~ir~~~~~d~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-------~~~~vG~~~~~~--------- 64 (140)
T PRK03624 1 DAMEIRVFRQADFEAVIALWERCDLTRPWNDPEMDIERKLNHDPSLFLVAEV-------GGEVVGTVMGGY--------- 64 (140)
T ss_pred CceEEEEcccccHHHHHHHHHhcCCCcchhhHHHHHHHHhcCCCceEEEEEc-------CCcEEEEEEeec---------
Confidence 3578999999999999999887621 2332 22344444444445555554 789999987642
Q ss_pred ccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 87 DLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
.....++..++|+|+|||+|+|++|+..++++++.. |++.+.+.+...|.++++||+|+||+..+.
T Consensus 65 ----------~~~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~-~~~~~~~~~~~~N~~~~~~y~k~GF~~~~~ 130 (140)
T PRK03624 65 ----------DGHRGWAYYLAVHPDFRGRGIGRALVARLEKKLIAR-GCPKINLQVREDNDAVLGFYEALGYEEQDR 130 (140)
T ss_pred ----------cCCCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHC-CCCEEEEEEecCcHHHHHHHHHcCCccccE
Confidence 112245778999999999999999999999999998 999999999999999999999999998664
No 14
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.78 E-value=8.1e-18 Score=127.25 Aligned_cols=144 Identities=17% Similarity=0.273 Sum_probs=112.6
Q ss_pred EEEeCCCCCHHHHHHHHHcc----C--CCC-Cc----HHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecC
Q 025384 13 CYRPIRPSDLMILQQLHADA----F--PIR-YE----SEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQAN 81 (253)
Q Consensus 13 ~ir~~~~~D~~~l~~l~~~~----~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~ 81 (253)
.||+++++|++.+.++..+. + ... .+ ..++...........++... +|++||++.+.....
T Consensus 2 ~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~vG~~~~~~~~~- 73 (156)
T TIGR03585 2 NFTPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQ-------ESRPIGVISFTDINL- 73 (156)
T ss_pred CcccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEE-------CCEEEEEEEEEecCh-
Confidence 48999999999999997653 1 111 22 34566655554445565554 899999999874321
Q ss_pred cccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEE
Q 025384 82 ESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCV 161 (253)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~ 161 (253)
......+ ++++.|.+| +|+|++++..+++++++.++++.+.+.|...|.+|++||+|+||+..
T Consensus 74 ---------------~~~~~~~-g~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~Gf~~~ 136 (156)
T TIGR03585 74 ---------------VHKSAFW-GIYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKFGFERE 136 (156)
T ss_pred ---------------hhCeEEE-EEEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHcCCeEe
Confidence 1122223 455899999 99999999999999998669999999999999999999999999999
Q ss_pred EEEcceEEeCCeeeeeEEEE
Q 025384 162 RRLHGFYLINGQHYDSYLFV 181 (253)
Q Consensus 162 ~~~~~~~~~~g~~~d~~~~~ 181 (253)
+..+++...+|++.|.++|.
T Consensus 137 g~~~~~~~~~g~~~d~~~~~ 156 (156)
T TIGR03585 137 GVFRQGIFKEGEYYDVLLMY 156 (156)
T ss_pred eeehhheeECCeEEEEEEeC
Confidence 99999999999999998873
No 15
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.74 E-value=6.3e-17 Score=124.89 Aligned_cols=145 Identities=23% Similarity=0.368 Sum_probs=116.9
Q ss_pred CCceEEEeCCCCCHH--HHHHHHHccCC--CCCcHHHHHHhhcccceeeeeeeecCCCCCCCC----ceEEEEEEEEeec
Q 025384 9 HPTICYRPIRPSDLM--ILQQLHADAFP--IRYESEFFQNVVNARDIVSWGAVDRSRPNGHSD----ELIGFVTARIVQA 80 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~--~l~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ivG~~~~~~~~~ 80 (253)
...+.+|.+..+|+. .+..+....|. ..|+...+...+.......+++.... .++ +++|++.......
T Consensus 9 ~~~~~ir~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~----~~~~~~~~~~G~~~~~~~~~ 84 (177)
T COG0456 9 EDKVTIREAINKDLLDVALAALEARTFDIRLPWSREYFEKDLTQAPELLLVAETGG----LDGLLDGKVVGFLLVRVVDG 84 (177)
T ss_pred ccceehhhhhhcccchHHHHHHhhhcCCCCCcchHHHHHHHHhhCcceeEEEEecc----cCCCcccceeEEEEEEEecC
Confidence 345789999999999 88888888888 47888888888888777777766410 012 6999998863211
Q ss_pred CcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCc-cEEEEEEEecCHHHHHHHHhCCCE
Q 025384 81 NESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTC-RALYLHVISYNIPAIHLYKKMSFK 159 (253)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~-~~i~l~v~~~N~~a~~fy~k~GF~ 159 (253)
.. .. ....+|..++|+|+|||+|||++|++++++.+.+. +. ..+.|+|..+|.+|++||+|+||+
T Consensus 85 ~~------------~~-~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~-~~~~~~~L~V~~~N~~Ai~lY~~~GF~ 150 (177)
T COG0456 85 RP------------SA-DHEGHIYNLAVDPEYRGRGIGRALLDEALERLRER-GLADKIVLEVRESNEAAIGLYRKLGFE 150 (177)
T ss_pred Cc------------cc-cCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhc-CCCceEEEEEecCChHHHHHHHHcCCE
Confidence 00 00 34678999999999999999999999999999998 75 899999999999999999999999
Q ss_pred EEEEEcceEEeC
Q 025384 160 CVRRLHGFYLIN 171 (253)
Q Consensus 160 ~~~~~~~~~~~~ 171 (253)
.++....|+...
T Consensus 151 ~~~~~~~yy~~~ 162 (177)
T COG0456 151 VVKIRKNYYADG 162 (177)
T ss_pred EEeeehhhccCC
Confidence 999998887533
No 16
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.74 E-value=2.7e-17 Score=128.67 Aligned_cols=130 Identities=22% Similarity=0.244 Sum_probs=97.6
Q ss_pred CceEEEeCCCCCHHHHHHHHHccCCC-----CCc-H----HHHH----Hhhccc-ceeeeeeeecCCCCCCCCceEEEEE
Q 025384 10 PTICYRPIRPSDLMILQQLHADAFPI-----RYE-S----EFFQ----NVVNAR-DIVSWGAVDRSRPNGHSDELIGFVT 74 (253)
Q Consensus 10 ~~i~ir~~~~~D~~~l~~l~~~~~~~-----~~~-~----~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~ivG~~~ 74 (253)
..+.||+++++|++.+.++..+.+.. .|. + .++. ...... ....++... .++++||++.
T Consensus 42 ~~~~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~------~~g~iiG~i~ 115 (191)
T TIGR02382 42 SDPGARVATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRD------ASGDPRGYVT 115 (191)
T ss_pred CCCcceeCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEc------cCCeEEEEEE
Confidence 45689999999999999999887531 221 1 1222 222222 222232222 3789999998
Q ss_pred EEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHH
Q 025384 75 ARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYK 154 (253)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~ 154 (253)
+.... ....++..++|+|++||+|+|++|++++++++++. |+..|.+.|...|.+|++||+
T Consensus 116 l~~~~------------------~~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~-g~~~I~l~v~~~N~~A~~~Y~ 176 (191)
T TIGR02382 116 LRELN------------------DTDARIGLLAVFPGAQSRGIGAELMQTALNWCYAR-GLTRLRVATQMGNTAALRLYI 176 (191)
T ss_pred EEecC------------------CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCHHHHHHHH
Confidence 86421 12245778899999999999999999999999987 999999999999999999999
Q ss_pred hCCCEEEEEE
Q 025384 155 KMSFKCVRRL 164 (253)
Q Consensus 155 k~GF~~~~~~ 164 (253)
|+||+.++..
T Consensus 177 klGF~~~~~~ 186 (191)
T TIGR02382 177 RSGANIESTA 186 (191)
T ss_pred HcCCccccce
Confidence 9999987754
No 17
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=99.74 E-value=2.4e-18 Score=124.15 Aligned_cols=152 Identities=24% Similarity=0.420 Sum_probs=126.6
Q ss_pred eEEEeCCCCCHHHHHHHHHccCCCCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccc
Q 025384 12 ICYRPIRPSDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSY 91 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~ 91 (253)
+.||.++++|+-.+....-.+.|..|.-.++.....+.....|++.+ .+|+||||+.+..+.+.+
T Consensus 2 m~iR~ar~~DL~~mQ~~Nl~~lpENyqmkyylyh~lswp~lSyVA~D------~~gkiVGYvlAkmee~p~--------- 66 (193)
T KOG3235|consen 2 MNIRRARPDDLLEMQHCNLLNLPENYQMKYYLYHGLSWPQLSYVAED------ENGKIVGYVLAKMEEDPD--------- 66 (193)
T ss_pred cccccCCHHHHHHhhhcccccCcHHHhHHHHHHhhcccccceEEEEc------CCCcEEEEeeeehhhccc---------
Confidence 46899999999999888888888888877777777778888888886 589999999998643222
Q ss_pred cCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHH-hCCCEEEEEEcceEEe
Q 025384 92 DSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYK-KMSFKCVRRLHGFYLI 170 (253)
Q Consensus 92 ~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~-k~GF~~~~~~~~~~~~ 170 (253)
.....+.|.+++|..+||+.|||++|+.+......+-+++..|.|+|...|.+|+.+|+ .+||++....+.||-
T Consensus 67 ----~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~eve~kYYa- 141 (193)
T KOG3235|consen 67 ----DEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTLGFVVCEVEPKYYA- 141 (193)
T ss_pred ----CCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhccceEEeeccccccc-
Confidence 23456779999999999999999999999888888878999999999999999999999 799999988887775
Q ss_pred CCeeeeeEEEEEEec
Q 025384 171 NGQHYDSYLFVYYIN 185 (253)
Q Consensus 171 ~g~~~d~~~~~~~l~ 185 (253)
+| .|++-|.+.|+
T Consensus 142 dG--edAyaM~~~L~ 154 (193)
T KOG3235|consen 142 DG--EDAYAMRKDLS 154 (193)
T ss_pred cc--HHHHHHHHHHH
Confidence 44 37776766553
No 18
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.73 E-value=6.1e-17 Score=122.67 Aligned_cols=125 Identities=18% Similarity=0.260 Sum_probs=94.1
Q ss_pred EEeCCCCCHHHHHHHHHccCCCCCc--HHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccc
Q 025384 14 YRPIRPSDLMILQQLHADAFPIRYE--SEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSY 91 (253)
Q Consensus 14 ir~~~~~D~~~l~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~ 91 (253)
||+++++|++++.++..+....... ..+.. .........+++.. .++++||++.+....
T Consensus 1 IR~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~------~~~~ivG~~~~~~~~------------ 61 (157)
T TIGR02406 1 FRPPRIEDGAGIWELVKDCPPLDLNSSYAYLL-LCTDFADTSIVAES------EGGEIVGFVSGYLRP------------ 61 (157)
T ss_pred CCCCccccHHHHHHHHHhCCCCCcccceehhh-hhhhcCCcEEEEEc------CCCeEEEEEEEEecC------------
Confidence 5889999999999999887543322 11221 12222223344432 267999998764311
Q ss_pred cCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEE
Q 025384 92 DSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVR 162 (253)
Q Consensus 92 ~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~ 162 (253)
......++..++|+|++||+|+|++|++.++++++.. ++..+.+.|...|.+|++||+|+||+...
T Consensus 62 ----~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~-~~~~i~~~v~~~N~~a~~ly~k~G~~~~~ 127 (157)
T TIGR02406 62 ----DRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACE-RVRHLETTITPDNQASRALFKALARRRGV 127 (157)
T ss_pred ----CCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhC-CCCEEEEEEcCCCHHHHHHHHHhCcccCC
Confidence 1234577889999999999999999999999999988 89999999999999999999999998743
No 19
>PTZ00330 acetyltransferase; Provisional
Probab=99.73 E-value=3.2e-16 Score=117.28 Aligned_cols=129 Identities=16% Similarity=0.266 Sum_probs=92.3
Q ss_pred ceEEEeCCCCCHHHHHHHHHccCCCC-CcHHHHHHhhcc---cc--eeeeeeeecCCCCCCCCceEEEEEEEEeecCccc
Q 025384 11 TICYRPIRPSDLMILQQLHADAFPIR-YESEFFQNVVNA---RD--IVSWGAVDRSRPNGHSDELIGFVTARIVQANESE 84 (253)
Q Consensus 11 ~i~ir~~~~~D~~~l~~l~~~~~~~~-~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~ 84 (253)
++.||+++++|++.+.++..+..... .+.+........ .. ...+.+. .++++||++.+......
T Consensus 6 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~vG~~~~~~~~~~--- 75 (147)
T PTZ00330 6 SLELRDLEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHS-------PTQRIVGTASLFVEPKF--- 75 (147)
T ss_pred eEEEEEcccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEEe-------CCCEEEEEEEEEecccc---
Confidence 58999999999999999987654332 232222222211 11 1223332 37899999988642110
Q ss_pred ccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEE
Q 025384 85 IGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVR 162 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~ 162 (253)
........++..++|+|+|||+|||++|++++++++++. |+..+.+.+ |.+|++||+|+||+...
T Consensus 76 ---------~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~-~~~~l~l~~---n~~a~~~y~k~GF~~~~ 140 (147)
T PTZ00330 76 ---------TRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSS-GCYKVILDC---TEDMVAFYKKLGFRACE 140 (147)
T ss_pred ---------ccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHC-CCCEEEEec---ChHHHHHHHHCCCEEec
Confidence 011223567889999999999999999999999999998 888876654 88999999999999765
No 20
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=4.2e-16 Score=112.27 Aligned_cols=137 Identities=20% Similarity=0.173 Sum_probs=103.1
Q ss_pred CCceEEEeCCCCCHHHHHHHHHccC-------CCCCcHHHHHH-hhcccce-eeeeeeecCCCCCCCCceEEEEEEEEee
Q 025384 9 HPTICYRPIRPSDLMILQQLHADAF-------PIRYESEFFQN-VVNARDI-VSWGAVDRSRPNGHSDELIGFVTARIVQ 79 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~~l~~l~~~~~-------~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ivG~~~~~~~~ 79 (253)
|+.++||.++|+|.+.+.++..+.- +..-.+..+.. ...++.. ..+++.. ...++.++|++......
T Consensus 1 m~~~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~i----e~~~~~~aGf~~yf~~y 76 (163)
T KOG3216|consen 1 MDNIRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAI----ETSGEVVAGFALYFNNY 76 (163)
T ss_pred CCceEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEE----ecCCCceeEEeeeeccc
Confidence 4568999999999999999977642 11112223333 2223333 3333221 11278999999887421
Q ss_pred cCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCE
Q 025384 80 ANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFK 159 (253)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~ 159 (253)
+.+......|+..|+|.|+|||+|+|+.|++.+.+.|.+. |+.+++..|...|.+|+.||++.|++
T Consensus 77 -------------stW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~-G~~rv~w~vldwN~rAi~lY~k~gaq 142 (163)
T KOG3216|consen 77 -------------STWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKL-GTPRVEWVVLDWNHRAILLYEKVGAQ 142 (163)
T ss_pred -------------ccccccceEEEEeeEecchhcccChHHHHHHHHHHHHHHc-CCCcEEEEEeccchhHHHHHHHhCcc
Confidence 2334457789999999999999999999999999999999 99999999999999999999999999
Q ss_pred EEEE
Q 025384 160 CVRR 163 (253)
Q Consensus 160 ~~~~ 163 (253)
....
T Consensus 143 ~l~~ 146 (163)
T KOG3216|consen 143 DLKE 146 (163)
T ss_pred ccce
Confidence 7665
No 21
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.72 E-value=2.7e-16 Score=118.48 Aligned_cols=133 Identities=23% Similarity=0.308 Sum_probs=98.0
Q ss_pred EEeCC-CCCHHHHHHHHHcc----C-CCCCc---HHHHHHhh-cccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcc
Q 025384 14 YRPIR-PSDLMILQQLHADA----F-PIRYE---SEFFQNVV-NARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANES 83 (253)
Q Consensus 14 ir~~~-~~D~~~l~~l~~~~----~-~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~ 83 (253)
||+++ ++|++.|.+|.++. | ...+. .+.+...+ ..+....+++.. +|+++|++.+......
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~-------dg~~~g~~~~~~~~~~-- 71 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAED-------DGEPIGYFEIYWPDED-- 71 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEE-------TTEEEEEEEEEEGGGS--
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEE-------CCEEEEEEEEeccccc--
Confidence 79999 99999999998764 2 22222 22333344 356667777776 9999999987542211
Q ss_pred cccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 84 EIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
.........+..++++|++||+|+|+.+++.+++++++.+++.+|.+.+.+.|.+++++|+|+||+.+++
T Consensus 72 ----------~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~GF~~~g~ 141 (152)
T PF13523_consen 72 ----------YDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKAGFRKVGE 141 (152)
T ss_dssp ----------S---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHTT-EEEEE
T ss_pred ----------ccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHcCCEEeeE
Confidence 1114566678888999999999999999999999999988999999999999999999999999999998
Q ss_pred Ec
Q 025384 164 LH 165 (253)
Q Consensus 164 ~~ 165 (253)
..
T Consensus 142 ~~ 143 (152)
T PF13523_consen 142 FE 143 (152)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 22
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.71 E-value=2.9e-16 Score=123.24 Aligned_cols=130 Identities=23% Similarity=0.265 Sum_probs=98.1
Q ss_pred ceEEEeCCCCCHHHHHHHHHccCCC-----CC-c----HHHHHHhhc----cc-ceeeeeeeecCCCCCCCCceEEEEEE
Q 025384 11 TICYRPIRPSDLMILQQLHADAFPI-----RY-E----SEFFQNVVN----AR-DIVSWGAVDRSRPNGHSDELIGFVTA 75 (253)
Q Consensus 11 ~i~ir~~~~~D~~~l~~l~~~~~~~-----~~-~----~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~ivG~~~~ 75 (253)
+..||+++++|++.+.++..+.+.. .| + ..++...+. .. ....+++.. .++++||++.+
T Consensus 46 ~~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~------~~g~~vG~~~l 119 (194)
T PRK10975 46 TTGARVATETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRD------ASGQIQGFVTL 119 (194)
T ss_pred CCCcccCCcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEc------CCCCEEEEEEE
Confidence 4678999999999999998876542 12 1 123332221 11 123333332 36899999988
Q ss_pred EEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHh
Q 025384 76 RIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK 155 (253)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k 155 (253)
.... ....++..++|+|+|||+|+|++|++.+++++++. |++.+.+.|...|.++++||+|
T Consensus 120 ~~~~------------------~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~i~l~v~~~N~~a~~~yek 180 (194)
T PRK10975 120 RELN------------------DTDARIGLLAVFPGAQGRGIGARLMQAALNWCQAR-GLTRLRVATQMGNLAALRLYIR 180 (194)
T ss_pred EecC------------------CCceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHc-CCCEEEEEeCCCcHHHHHHHHH
Confidence 6321 12356778899999999999999999999999988 9999999999999999999999
Q ss_pred CCCEEEEEEc
Q 025384 156 MSFKCVRRLH 165 (253)
Q Consensus 156 ~GF~~~~~~~ 165 (253)
+||+.+++..
T Consensus 181 ~Gf~~~~~~~ 190 (194)
T PRK10975 181 SGANIESTAY 190 (194)
T ss_pred CCCeEeEEEe
Confidence 9999988653
No 23
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.69 E-value=1.4e-15 Score=136.18 Aligned_cols=138 Identities=20% Similarity=0.239 Sum_probs=107.0
Q ss_pred CCceEEEeC-CCCCHHHHHHHHHccCCCCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccc
Q 025384 9 HPTICYRPI-RPSDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGD 87 (253)
Q Consensus 9 ~~~i~ir~~-~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~ 87 (253)
...+.||++ +++|++.+.+++.+....++...++...........+++.+ ..++++||++........
T Consensus 80 ~~g~~IR~~~~~~D~~~I~~L~~~~~~~p~~~~~~~~~~~~~~~~~~vA~~-----~~~g~IVG~~~~~~~~~~------ 148 (547)
T TIGR03103 80 PRGFTVRRLRGPADVDAINRLYAARGMVPVRVDFVLDHRHSRAITYLVAED-----EASGAIIGTVMGVDHRKA------ 148 (547)
T ss_pred CCCcEEEeCCChhHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCceEEEEEE-----CCCCeEEEEEEEEecccc------
Confidence 345899997 78999999999999765566666655555555556666653 126899999876421100
Q ss_pred cccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 88 LLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
........++..++|+|+|||+|||++|++++++++++. |+..+.+.|...|.+|++||+|+||+.+...
T Consensus 149 ------~~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~-G~~~i~L~V~~~N~~Ai~fY~klGf~~~~~y 218 (547)
T TIGR03103 149 ------FNDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSR-GCAYMDLSVMHDNEQAIALYEKLGFRRIPVF 218 (547)
T ss_pred ------ccCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHC-CCCEEEEEEcCCCHHHHHHHHHCCCEEeeEE
Confidence 001122356889999999999999999999999999998 9999999999999999999999999987654
No 24
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.68 E-value=2.6e-15 Score=112.82 Aligned_cols=133 Identities=16% Similarity=0.122 Sum_probs=94.9
Q ss_pred CCceEEEeCCCCCHH-HHHHHHHccCCC-CCcHHHHHHhh----ccc-ceeeeeeeecCCCCCCCCceEEEEEEEEeecC
Q 025384 9 HPTICYRPIRPSDLM-ILQQLHADAFPI-RYESEFFQNVV----NAR-DIVSWGAVDRSRPNGHSDELIGFVTARIVQAN 81 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~-~l~~l~~~~~~~-~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~ 81 (253)
.+.+.||+++++|++ .+.+++.+.... .++.+.+.+.+ ... ....+++.+ ..++++||++.+.....
T Consensus 4 ~~~~~ir~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ivG~~~~~~~~~- 77 (150)
T PLN02706 4 GEKFKVRRLEISDKSKGFLELLQQLTVVGDVTEEEFEARFQELASLGDDHLICVIED-----AASGRIIATGSVFVERK- 77 (150)
T ss_pred CCceEEeEhhhcccchHHHHHHHhccCCCCCCHHHHHHHHHHHHhCCCcEEEEEEEe-----CCCCcEEEEEEEEEEee-
Confidence 356889999999998 588887764332 34433333333 222 223333322 12589999988753210
Q ss_pred cccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEE
Q 025384 82 ESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCV 161 (253)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~ 161 (253)
.........++..++|+|+|||+|||++|++.++++|++. |++++.+.+.+.|. +||+|+||+..
T Consensus 78 -----------~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~-g~~~i~l~~~~~N~---~~y~k~GF~~~ 142 (150)
T PLN02706 78 -----------FIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSA-GCYKVILDCSEENK---AFYEKCGYVRK 142 (150)
T ss_pred -----------cccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHc-CCCEEEEEeccccH---HHHHHCcCEEe
Confidence 0111234567888999999999999999999999999987 99999999999995 59999999987
Q ss_pred E
Q 025384 162 R 162 (253)
Q Consensus 162 ~ 162 (253)
+
T Consensus 143 g 143 (150)
T PLN02706 143 E 143 (150)
T ss_pred h
Confidence 6
No 25
>PRK10514 putative acetyltransferase; Provisional
Probab=99.67 E-value=1.9e-15 Score=112.84 Aligned_cols=134 Identities=23% Similarity=0.264 Sum_probs=95.0
Q ss_pred eEEEeCCCCCHHHHHHHHHccCC------CCCcHHHHHHhhcc--cceeeeeeeecCCCCCCCCceEEEEEEEEeecCcc
Q 025384 12 ICYRPIRPSDLMILQQLHADAFP------IRYESEFFQNVVNA--RDIVSWGAVDRSRPNGHSDELIGFVTARIVQANES 83 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~ 83 (253)
+.||+++++|++.+.++..+.+. ..+..+.+...+.. +....+.+.. .++++||++.+..
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~iG~~~~~~------ 69 (145)
T PRK10514 2 ISIRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAVD------ERDQPVGFMLLSG------ 69 (145)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEEe------cCCcEEEEEEEec------
Confidence 57999999999999999876321 11122222222110 1122333332 3789999987641
Q ss_pred cccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 84 EIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
..+..++|+|+|||+|+|++|++.+.+.+ +.+.+.+...|.+|++||+|+||+..++
T Consensus 70 -----------------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~------~~i~~~v~~~N~~a~~~yek~Gf~~~~~ 126 (145)
T PRK10514 70 -----------------GHMEALFVDPDVRGCGVGRMLVEHALSLH------PELTTDVNEQNEQAVGFYKKMGFKVTGR 126 (145)
T ss_pred -----------------CcEeEEEECHHhccCCHHHHHHHHHHHhc------cccEEEeecCCHHHHHHHHHCCCEEecc
Confidence 12457899999999999999999998853 3677899999999999999999999887
Q ss_pred EcceEEeCCeeeeeEEEEE
Q 025384 164 LHGFYLINGQHYDSYLFVY 182 (253)
Q Consensus 164 ~~~~~~~~g~~~d~~~~~~ 182 (253)
.+.. ..|...+.+.|.+
T Consensus 127 ~~~~--~~~~~~~~~~~~~ 143 (145)
T PRK10514 127 SEVD--DQGRPYPLLHLAY 143 (145)
T ss_pred cccC--CCCCccceEEEEe
Confidence 6533 4577788887765
No 26
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.67 E-value=8.2e-16 Score=103.59 Aligned_cols=81 Identities=27% Similarity=0.442 Sum_probs=72.6
Q ss_pred CCCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEe
Q 025384 65 HSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVIS 144 (253)
Q Consensus 65 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~ 144 (253)
++|++||++.+....... ......++..++|+|+|||+|||+.|++++++++++. |++.+.+.+..
T Consensus 3 ~~~~ivg~~~~~~~~~~~-------------~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~-g~~~i~~~~~~ 68 (83)
T PF00583_consen 3 EDGQIVGFASLRPPPEPF-------------DHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKR-GIKRIYLDVSP 68 (83)
T ss_dssp ETTEEEEEEEEEEEETTT-------------TTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHT-TESEEEEEEET
T ss_pred CCCEEEEEEEEEECCCcc-------------ccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhc-CccEEEEEEeC
Confidence 489999999998754221 1257889999999999999999999999999999997 99999999999
Q ss_pred cCHHHHHHHHhCCCE
Q 025384 145 YNIPAIHLYKKMSFK 159 (253)
Q Consensus 145 ~N~~a~~fy~k~GF~ 159 (253)
.|.++++||+|+||+
T Consensus 69 ~n~~~~~~~~k~Gf~ 83 (83)
T PF00583_consen 69 DNPAARRFYEKLGFE 83 (83)
T ss_dssp TGHHHHHHHHHTTEE
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999996
No 27
>PRK09831 putative acyltransferase; Provisional
Probab=99.66 E-value=2e-15 Score=113.18 Aligned_cols=129 Identities=25% Similarity=0.356 Sum_probs=93.9
Q ss_pred eEEEeCCCCCHHHHHHHHHccCCC----CCcHHHHH-----------HhhcccceeeeeeeecCCCCCCCCceEEEEEEE
Q 025384 12 ICYRPIRPSDLMILQQLHADAFPI----RYESEFFQ-----------NVVNARDIVSWGAVDRSRPNGHSDELIGFVTAR 76 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~~~~----~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~ 76 (253)
+.||+++++|++.+.++..+.+.. .++++... ..+. ....+++.. +|++||++.+.
T Consensus 1 ~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~-------~~~iiG~~~~~ 71 (147)
T PRK09831 1 IQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLA--KSQVRVAVI-------NAQPVGFITCI 71 (147)
T ss_pred CccccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHh--cCceEEEEE-------CCEEEEEEEeh
Confidence 358999999999999998765322 22222222 2222 223445544 89999998764
Q ss_pred EeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhC
Q 025384 77 IVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKM 156 (253)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~ 156 (253)
. .++..++|+|++||+|||++|++++++.+.. +.+.. |..+++||+|+
T Consensus 72 ~-----------------------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~--------l~v~~-~~~a~~~Y~k~ 119 (147)
T PRK09831 72 E-----------------------HYIDMLFVDPEYTRRGVASALLKPLIKSESE--------LTVDA-SITAKPFFERY 119 (147)
T ss_pred h-----------------------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh--------eEeec-chhhHHHHHHC
Confidence 1 2467899999999999999999999998754 33333 56899999999
Q ss_pred CCEEEEEEcceEEeCCeeeeeEEEEEE
Q 025384 157 SFKCVRRLHGFYLINGQHYDSYLFVYY 183 (253)
Q Consensus 157 GF~~~~~~~~~~~~~g~~~d~~~~~~~ 183 (253)
||+.++..+ ...+|.+.|.+.|.+.
T Consensus 120 Gf~~~g~~~--~~~~g~~~~~~~m~~~ 144 (147)
T PRK09831 120 GFQTVKQQR--VECRGEWFINFYMRYK 144 (147)
T ss_pred CCEEeeccc--eEECCEEEEeeEEEec
Confidence 999999876 2356889999999873
No 28
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.65 E-value=3.2e-15 Score=109.09 Aligned_cols=123 Identities=20% Similarity=0.301 Sum_probs=90.5
Q ss_pred EEEeCCCCCHHHHHHHHHccCCCCCcHH----HHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCccccccc
Q 025384 13 CYRPIRPSDLMILQQLHADAFPIRYESE----FFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDL 88 (253)
Q Consensus 13 ~ir~~~~~D~~~l~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~ 88 (253)
+||+++++|.+++.++++++|+...... +...... ....+++.+ ++++||.+.+....-
T Consensus 1 ~iR~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~ivg~~~~~~~~~-------- 63 (127)
T PF13527_consen 1 EIRPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLYG--PGRCVVAED-------DGKIVGHVGLIPRRL-------- 63 (127)
T ss_dssp -EEEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHH--TTEEEEEEE-------TTEEEEEEEEEEEEE--------
T ss_pred CceECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhcccC--cCcEEEEEE-------CCEEEEEEEEEEEEE--------
Confidence 4899999999999999999999876653 2233332 235677776 999999998875320
Q ss_pred ccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEE
Q 025384 89 LSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCV 161 (253)
Q Consensus 89 ~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~ 161 (253)
..........++..++|+|+|||+|+|++|++++++.+++. |+..+.+.. ....||+++||+.+
T Consensus 64 ---~~~g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~-g~~~~~l~~-----~~~~~Y~~~G~~~~ 127 (127)
T PF13527_consen 64 ---SVGGKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARER-GVPFIFLFP-----SSPPFYRRFGFEYA 127 (127)
T ss_dssp ---EETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHT-T-SEEEEE------SSHHHHHHTTEEEE
T ss_pred ---EECCEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhC-CCCEEEEec-----CChhhhhcCCCEEC
Confidence 11112335789999999999999999999999999999999 888777755 23689999999863
No 29
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.64 E-value=4.1e-15 Score=113.95 Aligned_cols=122 Identities=16% Similarity=0.252 Sum_probs=88.5
Q ss_pred CceEEEeCCCCCHHHHHHHHHccCCCCC-cHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCccccccc
Q 025384 10 PTICYRPIRPSDLMILQQLHADAFPIRY-ESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDL 88 (253)
Q Consensus 10 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~ 88 (253)
+++.+|+++++|.+.+.++......... ............ ...+++.. +++++||++.+....
T Consensus 4 ~~i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~va~~------~~~~iiG~~~~~~~~--------- 67 (169)
T PRK07922 4 GAITVRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAV-QEFWVAEH------LDGEVVGCGALHVMW--------- 67 (169)
T ss_pred CCceeecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhhc-CcEEEEEe------cCCcEEEEEEEeecC---------
Confidence 4689999999999999999876543211 111111222222 23345541 288999998876321
Q ss_pred ccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEE
Q 025384 89 LSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVR 162 (253)
Q Consensus 89 ~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~ 162 (253)
...+.+..++|+|+|||+|+|++|++++++++++. |++.+.+.+. +++||+|+||+.++
T Consensus 68 ---------~~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~-g~~~l~~~~~-----~~~fY~k~GF~~~~ 126 (169)
T PRK07922 68 ---------EDLAEIRTVAVDPAARGRGVGHAIVERLLDVAREL-GLSRVFVLTF-----EVEFFARHGFVEID 126 (169)
T ss_pred ---------CCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHc-CCCEEEEEec-----cHHHHHHCCCEECc
Confidence 12356778999999999999999999999999998 9999988765 26899999999854
No 30
>PHA00673 acetyltransferase domain containing protein
Probab=99.63 E-value=1.1e-14 Score=107.86 Aligned_cols=125 Identities=14% Similarity=0.132 Sum_probs=99.4
Q ss_pred eCCCCCHHHHHHHHHccC-C---------CCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccc
Q 025384 16 PIRPSDLMILQQLHADAF-P---------IRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEI 85 (253)
Q Consensus 16 ~~~~~D~~~l~~l~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~ 85 (253)
-++.+|+++|.+|+.+-- + .+| ...|.....++....+++.+ +|++||++.+...+.
T Consensus 11 ~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y-~~af~ai~~dp~~~llVa~~-------~g~vVG~~~l~~~p~----- 77 (154)
T PHA00673 11 FAELADAPTFASLCAEYAHESANADLAGRAPD-HHAYAGMEAAGVAHFLGVFR-------GEELVGFACLLVTPV----- 77 (154)
T ss_pred hccHhhHHHHHHHHHhcccccccccccccchh-HHHHHHHHhCCCcEEEEEEE-------CCEEEEEEEEEEecC-----
Confidence 478899999999987621 0 112 12377777888888888876 899999999886431
Q ss_pred cccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEE
Q 025384 86 GDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVR 162 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~ 162 (253)
........+.|..++|+|++||+|||++|+++++++|+.. |+..++++..+.- ..+.||.++|++...
T Consensus 78 -------l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~-Gc~~lyis~~p~~-~tv~fy~~~g~~~~~ 145 (154)
T PHA00673 78 -------PHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDL-GATGLYVSGPTEG-RLVQLLPAAGYRETN 145 (154)
T ss_pred -------CccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHC-CCCEEEEecCCCc-cchHHHHhCCchhhc
Confidence 2233456788999999999999999999999999999999 9999999866543 579999999998754
No 31
>PRK07757 acetyltransferase; Provisional
Probab=99.62 E-value=7.3e-15 Score=110.65 Aligned_cols=143 Identities=17% Similarity=0.243 Sum_probs=98.8
Q ss_pred eEEEeCCCCCHHHHHHHHHccCCCC----CcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccc
Q 025384 12 ICYRPIRPSDLMILQQLHADAFPIR----YESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGD 87 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~ 87 (253)
+.||+++++|++.+.++..+..+.. ...+.+...+ ...+++.. ++++||++.+....
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~-------~~~lvG~~~l~~~~-------- 62 (152)
T PRK07757 2 MEIRKARLSDVKAIHALINVYAKKGLMLPRSLDELYENI----RDFYVAEE-------EGEIVGCCALHILW-------- 62 (152)
T ss_pred ceEeeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHhcc----CcEEEEEE-------CCEEEEEEEEEecc--------
Confidence 5799999999999999987654322 2222222222 12344444 79999999886421
Q ss_pred cccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcce
Q 025384 88 LLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGF 167 (253)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~ 167 (253)
....++..++|+|+|||+|+|++|+..+++++.+. |+..+.+.+. +.+||+|+||+..+...
T Consensus 63 ----------~~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~-g~~~i~~~~~-----~~~~Y~k~GF~~~~~~~-- 124 (152)
T PRK07757 63 ----------EDLAEIRSLAVSEDYRGQGIGRMLVEACLEEAREL-GVKRVFALTY-----QPEFFEKLGFREVDKEA-- 124 (152)
T ss_pred ----------CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhC-CCCeEEEEeC-----cHHHHHHCCCEEccccc--
Confidence 23456889999999999999999999999999987 9988876653 35899999999987532
Q ss_pred EEeCCeeeeeEEEEEEecCCCCCCCHHHHH
Q 025384 168 YLINGQHYDSYLFVYYINGGRSPCSPLELV 197 (253)
Q Consensus 168 ~~~~g~~~d~~~~~~~l~~~~~~~~~~~~~ 197 (253)
..+..|.+ ..+-++...|...+++
T Consensus 125 -~~~~~~~~-----~~~~~~~~~~~~~~~~ 148 (152)
T PRK07757 125 -LPQKVWAD-----CIKCPKFPNCDEIAMI 148 (152)
T ss_pred -CChhHHhc-----CccCCCCCCcchhhhh
Confidence 11233333 3334555666665443
No 32
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.62 E-value=1.3e-14 Score=122.22 Aligned_cols=129 Identities=12% Similarity=0.155 Sum_probs=101.2
Q ss_pred CCceEEEeCCCCCHHHHHHHHHcc--CC---CCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcc
Q 025384 9 HPTICYRPIRPSDLMILQQLHADA--FP---IRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANES 83 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~~l~~l~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~ 83 (253)
.+.++||+++++|++.+.++.... |. ..|+.+.+...+.... .+.+..... ..++.+||++.+..
T Consensus 184 ~m~~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~~--~~~~~~~d~--~gd~givG~~~~~~------ 253 (320)
T TIGR01686 184 ELSLNISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKEE--IVTVSMSDR--FGDSGIIGIFVFEK------ 253 (320)
T ss_pred CCEEEEEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCCC--EEEEEEEec--CCCCceEEEEEEEe------
Confidence 456899999999999999998876 43 3566777777776552 232221000 02568999998753
Q ss_pred cccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEe--cCHHHHHHHHhCCCEEE
Q 025384 84 EIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVIS--YNIPAIHLYKKMSFKCV 161 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~--~N~~a~~fy~k~GF~~~ 161 (253)
....++|..++|+|++||+|+|++|++++++.+++. |++.+.+.+.. .|.+|++||+++||+.+
T Consensus 254 -------------~~~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~-G~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 254 -------------KEGNLFIDDLCMSCRALGRGVETRMLRWLFEQALDL-GNHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred -------------cCCcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHc-CCCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 224567999999999999999999999999999998 99999999864 79999999999999853
No 33
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.59 E-value=9.4e-14 Score=115.82 Aligned_cols=134 Identities=17% Similarity=0.165 Sum_probs=96.9
Q ss_pred CCceEEEeCCC-CCHHHHHHHHHccCCC-----CCcHHHHHHhhcc---cceeeeeeeecCCCCCCCCceEEEEEEEEee
Q 025384 9 HPTICYRPIRP-SDLMILQQLHADAFPI-----RYESEFFQNVVNA---RDIVSWGAVDRSRPNGHSDELIGFVTARIVQ 79 (253)
Q Consensus 9 ~~~i~ir~~~~-~D~~~l~~l~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~ 79 (253)
...+++|++++ .|.+.+.++.++.|+. .|..+.+...... .....+++.+ ..++++||++......
T Consensus 147 ~~g~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-----~~~~~~vG~~~~~~~~ 221 (292)
T TIGR03448 147 PDGVTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFD-----DAPGELLGFHWTKVHP 221 (292)
T ss_pred CCCeEeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCcCceEEEEE-----CCCCcEEEEEEEEecC
Confidence 46799999865 5888888888777653 3444444332211 1122344443 0158999997554211
Q ss_pred cCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCE
Q 025384 80 ANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFK 159 (253)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~ 159 (253)
......++..++|+|+|||+|||++|+..+++++++. |+..+.+.|...|.++++||+|+||+
T Consensus 222 ----------------~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~-g~~~v~l~v~~~N~~a~~~y~k~GF~ 284 (292)
T TIGR03448 222 ----------------DEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAAR-GLPAVMLYVEADNEAAVRTYEKLGFT 284 (292)
T ss_pred ----------------CCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHC-CCCEEEEEEeCCCHHHHHHHHHcCCE
Confidence 0122355667899999999999999999999999998 99999999999999999999999999
Q ss_pred EEEEE
Q 025384 160 CVRRL 164 (253)
Q Consensus 160 ~~~~~ 164 (253)
..++.
T Consensus 285 ~~~~~ 289 (292)
T TIGR03448 285 VAEVD 289 (292)
T ss_pred Ecccc
Confidence 87654
No 34
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=99.58 E-value=5.6e-15 Score=106.85 Aligned_cols=153 Identities=20% Similarity=0.318 Sum_probs=123.6
Q ss_pred EEEeCCCCCHHHHHHHHHccCCCCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCccccccccccc
Q 025384 13 CYRPIRPSDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYD 92 (253)
Q Consensus 13 ~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~ 92 (253)
++|+++++|+-..-.+.-+.....+.-.|+...+..-...+.++.. .++++.|++....++.
T Consensus 3 t~r~f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~------p~~~imgyimgk~Eg~------------ 64 (173)
T KOG3234|consen 3 TIRPFTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEA------PTGEIMGYIMGKVEGK------------ 64 (173)
T ss_pred ccccccHHHHHhhccccccccccccceehhHHHHHhChHHhEeccC------CCCceEEEEeeecccc------------
Confidence 5889999999888888777777777766666666555555455443 4799999999875431
Q ss_pred CCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcceEEeCC
Q 025384 93 SAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLING 172 (253)
Q Consensus 93 ~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~~~~~g 172 (253)
...-++++..+.|.|+||+.|+|+.|+..+.+..... +.-.+-+.|...|+-||.+|+++||...++..+||.. |
T Consensus 65 ---~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~-~a~fvDLfVr~sN~iAI~mYkkLGY~~YR~Vi~YY~~-g 139 (173)
T KOG3234|consen 65 ---DTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVD-NAYFVDLFVRVSNQIAIDMYKKLGYSVYRTVIEYYSV-G 139 (173)
T ss_pred ---CcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhh-hhheeeeeeeccchhHHHHHHhcCceEEEeeeeeecc-C
Confidence 2334677899999999999999999999999988877 7778889999999999999999999999999999975 5
Q ss_pred eeeeeEEEEEEecCCC
Q 025384 173 QHYDSYLFVYYINGGR 188 (253)
Q Consensus 173 ~~~d~~~~~~~l~~~~ 188 (253)
...|++-|++.++...
T Consensus 140 ~deda~dMRKalSrD~ 155 (173)
T KOG3234|consen 140 PDEDAYDMRKALSRDV 155 (173)
T ss_pred CCcchHhhhhhhccCc
Confidence 6678899998887543
No 35
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.58 E-value=1e-13 Score=99.53 Aligned_cols=104 Identities=25% Similarity=0.356 Sum_probs=78.3
Q ss_pred CHHHHHHHHHccCCC---C----------CcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccc
Q 025384 21 DLMILQQLHADAFPI---R----------YESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGD 87 (253)
Q Consensus 21 D~~~l~~l~~~~~~~---~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~ 87 (253)
|++++.++..+.+.. . +..+.+...+.......+++.. ++++||++.+.. +
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-------~~~ivG~~~~~~----~----- 64 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAEE-------GGEIVGFAWLEP----D----- 64 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEEE-------TTEEEEEEEEET----C-----
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEEE-------CCEEEEEEEEcC----C-----
Confidence 678888887764321 1 2355666666666667777776 999999998751 1
Q ss_pred cccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCC
Q 025384 88 LLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSF 158 (253)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF 158 (253)
..|..++|+|+|||+|||++|++.+++.++. |++.+.+. .|..+.+||+++||
T Consensus 65 -------------~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~--~~~~l~~~---~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 65 -------------GEISHLYVLPEYRGRGIGRALLDAAEKEAKD--GIRRLTVE---ANERARRFYRKLGF 117 (117)
T ss_dssp -------------EEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT--TCEEEEEE---C-HHHHHHHHHTT-
T ss_pred -------------CeEEEEEEChhhcCCcHHHHHHHHHHHHHHc--CCcEEEEE---eCHHHHHHHHhCCC
Confidence 1177899999999999999999999999954 78877666 88999999999998
No 36
>PRK10562 putative acetyltransferase; Provisional
Probab=99.58 E-value=9.4e-14 Score=103.79 Aligned_cols=129 Identities=21% Similarity=0.311 Sum_probs=90.6
Q ss_pred EEeCCCCCHHHHHHHHHccCC--CCCc-HHHH-------HHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcc
Q 025384 14 YRPIRPSDLMILQQLHADAFP--IRYE-SEFF-------QNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANES 83 (253)
Q Consensus 14 ir~~~~~D~~~l~~l~~~~~~--~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~ 83 (253)
||+++++|++.+.++..+... ..+. .... ..... .....+++.. ++++||++.+...
T Consensus 2 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~-------~~~~iG~~~~~~~----- 68 (145)
T PRK10562 2 IREYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYL-PAAQTWVWEE-------DGKLLGFVSVLEG----- 68 (145)
T ss_pred cccccchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhc-CcccEEEEEE-------CCEEEEEEEEeec-----
Confidence 799999999999999776432 2221 1111 11111 2223344444 7899999987520
Q ss_pred cccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 84 EIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
..+..++|+|+|||+|+|++|++.+++. +..+.+.+...|.+|++||+|+||+.++.
T Consensus 69 -----------------~~i~~~~v~~~~rg~G~g~~ll~~~~~~------~~~~~~~v~~~N~~s~~~y~k~Gf~~~~~ 125 (145)
T PRK10562 69 -----------------RFVGALFVAPKAVRRGIGKALMQHVQQR------YPHLSLEVYQKNQRAVNFYHAQGFRIVDS 125 (145)
T ss_pred -----------------cEEEEEEECHHHcCCCHHHHHHHHHHhh------CCeEEEEEEcCChHHHHHHHHCCCEEccc
Confidence 1366799999999999999999988773 45788889999999999999999999885
Q ss_pred EcceEEeCCeeeeeEEEEE
Q 025384 164 LHGFYLINGQHYDSYLFVY 182 (253)
Q Consensus 164 ~~~~~~~~g~~~d~~~~~~ 182 (253)
. +...++ .+..+|..
T Consensus 126 ~--~~~~~~--~~~~~~~~ 140 (145)
T PRK10562 126 A--WQEETQ--HPTWIMSW 140 (145)
T ss_pred c--ccCCCC--CEEEEEEe
Confidence 3 232223 67777765
No 37
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.57 E-value=1e-13 Score=102.92 Aligned_cols=126 Identities=17% Similarity=0.283 Sum_probs=90.1
Q ss_pred eEEEeCCCCCHHHHHHHHHcc----C---CCC-Cc----HHHHHHhhc-c--cceeeeeeeecCCCCCCCCceEEEEEEE
Q 025384 12 ICYRPIRPSDLMILQQLHADA----F---PIR-YE----SEFFQNVVN-A--RDIVSWGAVDRSRPNGHSDELIGFVTAR 76 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~----~---~~~-~~----~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~ivG~~~~~ 76 (253)
+.||+++++|++.+.++.++. + ... .+ .+++..... . .....|.+.. .+++++||++.+.
T Consensus 2 l~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----~~~~~~iG~i~~~ 76 (142)
T PF13302_consen 2 LTLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIED-----KDDGEIIGFIGLY 76 (142)
T ss_dssp EEEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEE-----TTTTEEEEEEEEE
T ss_pred EEEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEe-----ccCCceEEEeeee
Confidence 789999999999999998632 1 111 12 234442111 1 1144555554 1346899999995
Q ss_pred EeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhC
Q 025384 77 IVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKM 156 (253)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~ 156 (253)
.... ....+ ..++.|.|++||+|+|++++..+++++++.+|+.++.+.+.+.|.+|+++++|+
T Consensus 77 ~~~~----------------~~~~~-eig~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~ 139 (142)
T PF13302_consen 77 NIDK----------------NNNWA-EIGYWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKL 139 (142)
T ss_dssp EEET----------------TTTEE-EEEEEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHT
T ss_pred eccc----------------CCCcc-ccccchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHc
Confidence 4221 22333 346899999999999999999999999877799999999999999999999999
Q ss_pred CCE
Q 025384 157 SFK 159 (253)
Q Consensus 157 GF~ 159 (253)
||+
T Consensus 140 GF~ 142 (142)
T PF13302_consen 140 GFE 142 (142)
T ss_dssp T-E
T ss_pred CCC
Confidence 996
No 38
>PRK10314 putative acyltransferase; Provisional
Probab=99.54 E-value=2.2e-14 Score=108.01 Aligned_cols=136 Identities=18% Similarity=0.239 Sum_probs=94.4
Q ss_pred EEeCCCCCHHHHHHHHHccCCCCCcHHHHHHhhcc----cceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccc
Q 025384 14 YRPIRPSDLMILQQLHADAFPIRYESEFFQNVVNA----RDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLL 89 (253)
Q Consensus 14 ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~ 89 (253)
+..++.+++.++..++.+.|-....-.+ .. ... +....+.+.. ++++||++.+....
T Consensus 9 ~~~l~~~~~~~~~~lR~~VF~~eq~~~~-~e-~D~~d~~~~~~h~~~~~-------~~~~vg~~r~~~~~---------- 69 (153)
T PRK10314 9 HSELSVSQLYALLQLRCAVFVVEQNCPY-QD-IDGDDLTGDNRHILGWK-------NDELVAYARILKSD---------- 69 (153)
T ss_pred hhhCCHHHHHHHHHHHHHHhhhhcCCCc-cc-cCCCCCCCCcEEEEEEE-------CCEEEEEEEEecCC----------
Confidence 4567788888999999998864322111 11 111 1233445554 89999998886421
Q ss_pred cccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcceEE
Q 025384 90 SYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYL 169 (253)
Q Consensus 90 ~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~~~ 169 (253)
......+|..++|+|+|||+|+|++|++.++++++...+...+.+++ +..+.+||+|+||+.++.. +.
T Consensus 70 ------~~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a---~~~a~~fY~k~GF~~~g~~---f~ 137 (153)
T PRK10314 70 ------DDLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGA---QAHLQNFYQSFGFIPVTEV---YE 137 (153)
T ss_pred ------CCCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEeh---HHHHHHHHHHCCCEECCCc---cc
Confidence 11234679999999999999999999999999988764677777765 4578899999999987742 33
Q ss_pred eCCeeeeeEEEEE
Q 025384 170 INGQHYDSYLFVY 182 (253)
Q Consensus 170 ~~g~~~d~~~~~~ 182 (253)
..| .+.+.|.+
T Consensus 138 ~~G--i~h~~M~~ 148 (153)
T PRK10314 138 EDG--IPHIGMAR 148 (153)
T ss_pred cCC--CCcHhhhh
Confidence 445 34455543
No 39
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.52 E-value=7.6e-14 Score=127.01 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=90.8
Q ss_pred CCceEEEeCCCCCHHHHHHHHHccCCC----CCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCccc
Q 025384 9 HPTICYRPIRPSDLMILQQLHADAFPI----RYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESE 84 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~~l~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~ 84 (253)
+..+.||+++++|++.+.++...++.. .+..+.+. . .....+++.. ++++|||+.+...
T Consensus 461 ~~gm~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~~~l~---~-~~~~~~Va~~-------~g~IVG~~~l~~~------ 523 (614)
T PRK12308 461 TSGVKVRPARLTDIDAIEGMVAYWAGLGENLPRSRNELV---R-DIGSFAVAEH-------HGEVTGCASLYIY------ 523 (614)
T ss_pred CCCCEEEECCHHHHHHHHHHHHHHHhhhcccccCHHHHh---c-ccCcEEEEEE-------CCEEEEEEEEEEc------
Confidence 455889999999999999998765432 22222222 1 1223455554 8999999987641
Q ss_pred ccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 85 IGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
+....+|..++|+|+|||+|||++|++.+++++++. |++.+.+.+. +.+||+|+||+..+..
T Consensus 524 ------------~~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~-g~~~i~l~~~-----a~~FYek~GF~~~~~~ 585 (614)
T PRK12308 524 ------------DSGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQM-AIKKVFVLTR-----VPEFFMKQGFSPTSKS 585 (614)
T ss_pred ------------CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHC-CCCEEEEeeC-----cHHHHHHCCCEECCcc
Confidence 123467899999999999999999999999999999 9999887642 4689999999987743
No 40
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.52 E-value=4.5e-13 Score=89.43 Aligned_cols=69 Identities=30% Similarity=0.549 Sum_probs=58.0
Q ss_pred CCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEec
Q 025384 66 SDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISY 145 (253)
Q Consensus 66 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~ 145 (253)
++++||++.+.. .....++..++|+|++||+|||+.|++.+.+.+... .+.+.+
T Consensus 11 ~~~ivG~~~~~~-------------------~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~----~i~l~~--- 64 (79)
T PF13508_consen 11 DGEIVGFIRLWP-------------------NEDFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKSK----KIFLFT--- 64 (79)
T ss_dssp TTEEEEEEEEEE-------------------TTTEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTCS----EEEEEE---
T ss_pred CCEEEEEEEEEE-------------------cCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCCC----cEEEEE---
Confidence 999999999863 334678999999999999999999999999999654 555555
Q ss_pred CHHHHHHHHhCCCEE
Q 025384 146 NIPAIHLYKKMSFKC 160 (253)
Q Consensus 146 N~~a~~fy~k~GF~~ 160 (253)
|+.+.+||+++||++
T Consensus 65 ~~~~~~fY~~~GF~~ 79 (79)
T PF13508_consen 65 NPAAIKFYEKLGFEE 79 (79)
T ss_dssp EHHHHHHHHHTTEEE
T ss_pred cHHHHHHHHHCcCCC
Confidence 578999999999985
No 41
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.51 E-value=9.2e-14 Score=121.59 Aligned_cols=120 Identities=13% Similarity=0.136 Sum_probs=89.4
Q ss_pred ceEEEeCCCCCHHHHHHHHHccCCC----CCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCccccc
Q 025384 11 TICYRPIRPSDLMILQQLHADAFPI----RYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIG 86 (253)
Q Consensus 11 ~i~ir~~~~~D~~~l~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~ 86 (253)
-+.||+++++|++++.++.+..... .+..+.+.... ...+++.. ++++||++.+....
T Consensus 282 y~~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~~l~~~~----~~~~V~~~-------dg~iVG~~~~~~~~------- 343 (429)
T TIGR01890 282 FESIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREI----SEFSIIEH-------DGNIIGCAALYPYA------- 343 (429)
T ss_pred hhheEECCHHHHHHHHHHHHHHHHcCCchhhhHHHHHhhc----CcEEEEEE-------CCEEEEEEEEEecC-------
Confidence 3479999999999999997643322 23333333322 23344444 89999999887421
Q ss_pred ccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 87 DLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
....+++..++|+|+|||+|+|++|+++++++|.++ |++.+.+. ..| +.+||+|+||+.++.
T Consensus 344 ----------~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~-G~~~l~v~--~~~--a~~fY~k~GF~~~g~ 405 (429)
T TIGR01890 344 ----------EEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQM-GISRLFVL--TTR--TGHWFRERGFQTASV 405 (429)
T ss_pred ----------CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHc-CCCEEEEe--ecc--hHHHHHHCCCEECCh
Confidence 224567889999999999999999999999999999 99987543 344 579999999999876
No 42
>PHA01807 hypothetical protein
Probab=99.50 E-value=3.2e-13 Score=101.09 Aligned_cols=119 Identities=15% Similarity=0.099 Sum_probs=85.8
Q ss_pred eCCCCCHHHHHHHHHccC---CCC--Cc--HH---HHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccc
Q 025384 16 PIRPSDLMILQQLHADAF---PIR--YE--SE---FFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEI 85 (253)
Q Consensus 16 ~~~~~D~~~l~~l~~~~~---~~~--~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~ 85 (253)
.++.+|+..+..+..+.+ |.. |. ++ .+.....+.....+++.. ++++||++.+.....
T Consensus 8 ~~~~~d~~~~~~l~l~~l~e~p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~~-------dg~lvG~~~l~~~~~----- 75 (153)
T PHA01807 8 HAKAGTPSELQGLCWLAIQELEEFTLFRSKEEALERILDSTESNDRTELLVFR-------DGKLAGIAVLVFEDD----- 75 (153)
T ss_pred hhhhCCHHHHHHHHHHHHHhCccCCCCCChHHHHHHHHHHhhCCCceEEEEEE-------CCEEEEEEEEEcCCC-----
Confidence 367789999888876542 322 22 22 233323334444566655 899999998864210
Q ss_pred cccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhC
Q 025384 86 GDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKM 156 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~ 156 (253)
........+..++|+|+|||+|||++|++.++++|++. |+..+.+.|...|.+|++||++.
T Consensus 76 ---------~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~-G~~~l~l~v~~~n~~a~~~y~~~ 136 (153)
T PHA01807 76 ---------PHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEG-NLPLIAFSHREGEGRYTIHYRRV 136 (153)
T ss_pred ---------cceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHC-CCCEEEEEecCCcHHHHHHHHhc
Confidence 01122333455799999999999999999999999999 99999999999999999999974
No 43
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.50 E-value=9.2e-14 Score=122.13 Aligned_cols=119 Identities=15% Similarity=0.119 Sum_probs=89.6
Q ss_pred eEEEeCCCCCHHHHHHHHHcc----CCCCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccc
Q 025384 12 ICYRPIRPSDLMILQQLHADA----FPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGD 87 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~ 87 (253)
+.||+++++|++++.++.... +...+..+.+... ....+++.+ ++++||++.+....
T Consensus 295 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~----~~~~~va~~-------dg~iVG~~~~~~~~-------- 355 (441)
T PRK05279 295 EQLRRATIDDVGGILELIRPLEEQGILVRRSREQLERE----IDKFTVIER-------DGLIIGCAALYPFP-------- 355 (441)
T ss_pred HHeEeCCHHHHHHHHHHHHHHHHcCCccccCHHHHhcc----cCcEEEEEE-------CCEEEEEEEEEEcC--------
Confidence 679999999999999987542 2223333333322 223455554 89999998776421
Q ss_pred cccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 88 LLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
....+++..++|+|+|||+|+|++|++++++++++. |+..+.+.+ ..+++||+|+||+.++.
T Consensus 356 ---------~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~-g~~~l~l~~----~~a~~fY~k~GF~~~g~ 417 (441)
T PRK05279 356 ---------EEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQL-GLKRLFVLT----TRTAHWFLERGFVPVDV 417 (441)
T ss_pred ---------CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHc-CCCEEEEec----chHHHHHHHCcCEECCh
Confidence 124467889999999999999999999999999998 999887643 46899999999999875
No 44
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=99.50 E-value=7.5e-13 Score=102.45 Aligned_cols=159 Identities=16% Similarity=0.194 Sum_probs=113.3
Q ss_pred CCceEEEeCCCCCHHHHHHHHHcc------CCCC----Cc-H----HHHHHhhcccceeeeeeeecCCCCCCCCceEEEE
Q 025384 9 HPTICYRPIRPSDLMILQQLHADA------FPIR----YE-S----EFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFV 73 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~~l~~l~~~~------~~~~----~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~ 73 (253)
...+.+|++...|+..+..+.... +... +. . .++...........|...... ..++++||.+
T Consensus 7 ~~r~~lr~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~iG~~ 83 (187)
T COG1670 7 TLRLLLREVDLEDLELLAEWANDPEVMLFWWLPPPLTPPTSDEELLRLLAEAWEDLGGGAFAIELKA---TGDGELIGVI 83 (187)
T ss_pred cceeEeecCcHhHHHHHHHHhcChHhhcccCCCCCcccccchHHHHHHHHHHHhhcCCceEEEEEEe---CCCCeEEEEE
Confidence 345667888999999888664331 1111 11 1 222232333333444443311 0135899999
Q ss_pred EEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHH
Q 025384 74 TARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLY 153 (253)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy 153 (253)
.+..... .........++.+.|+++|+|+|++++.+++++++..++++++.+.|.+.|.+|++++
T Consensus 84 ~~~~~~~---------------~~~~~~~~ig~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ 148 (187)
T COG1670 84 GLSDIDR---------------AANGDLAEIGYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVY 148 (187)
T ss_pred EEEEecc---------------ccccceEEEEEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHH
Confidence 9875331 0112233456777999999999999999999999998899999999999999999999
Q ss_pred HhCCCEEEEEEcceEEeCCeeeeeEEEEEEec
Q 025384 154 KKMSFKCVRRLHGFYLINGQHYDSYLFVYYIN 185 (253)
Q Consensus 154 ~k~GF~~~~~~~~~~~~~g~~~d~~~~~~~l~ 185 (253)
+|+||+.++..+.....+|.+.|.++|.+...
T Consensus 149 ek~Gf~~eg~~~~~~~~~g~~~d~~~~~~~~~ 180 (187)
T COG1670 149 EKLGFRLEGELRQHEFIKGRWRDTVLYSLLRD 180 (187)
T ss_pred HHcCChhhhhhhhceeeCCeeeeEEEEEEech
Confidence 99999999999888778888999999887654
No 45
>PLN02825 amino-acid N-acetyltransferase
Probab=99.49 E-value=1.6e-13 Score=120.73 Aligned_cols=119 Identities=14% Similarity=0.094 Sum_probs=91.0
Q ss_pred eEEEeCCCCCHHHHHHHHHccCC----CCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccc
Q 025384 12 ICYRPIRPSDLMILQQLHADAFP----IRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGD 87 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~ 87 (253)
-.||+++++|++.+.++...... ..++.+.+...+ ...+++.. ++++|||+.+....
T Consensus 368 e~IR~At~eDi~~I~~Li~~lee~g~lv~rs~e~le~ei----~~f~V~e~-------Dg~IVG~aal~~~~-------- 428 (515)
T PLN02825 368 EGTRMARVEDLAGIRQIIRPLEESGILVRRTDEELLRAL----DSFVVVER-------EGSIIACAALFPFF-------- 428 (515)
T ss_pred hhheeCCHHHHHHHHHHHHHHHHcCCCcCCCHHHHHhcC----CcEEEEEE-------CCEEEEEEEEEeec--------
Confidence 45899999999999999876432 223334443332 12344444 89999999876421
Q ss_pred cccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 88 LLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
....+.+..++|+|+|||+|+|++|++++++.|++. |++.+++.+. .+.+||+++||+..+.
T Consensus 429 ---------~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~-G~~~L~Lltt----~a~~fY~k~GF~~~~~ 490 (515)
T PLN02825 429 ---------EEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASL-GLEKLFLLTT----RTADWFVRRGFSECSI 490 (515)
T ss_pred ---------CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHC-CCCEEEEEeC----cHHHHHHHCCCEEeCh
Confidence 224467889999999999999999999999999999 9999998773 5789999999998654
No 46
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.48 E-value=3.7e-13 Score=98.34 Aligned_cols=118 Identities=17% Similarity=0.253 Sum_probs=90.4
Q ss_pred EEEeCCCCCHHHHHHHHHccCCCC----CcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCccccccc
Q 025384 13 CYRPIRPSDLMILQQLHADAFPIR----YESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDL 88 (253)
Q Consensus 13 ~ir~~~~~D~~~l~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~ 88 (253)
.+|.++.+|++.|.++........ -+.+.+...+ ..|...+ .+|.+||++.+.+.
T Consensus 2 ~iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i-----~dF~i~E------~~g~viGC~aL~~~---------- 60 (153)
T COG1246 2 QIRKARISDIPAILELIRPLELQGILLRRSREQLEEEI-----DDFTIIE------RDGKVIGCAALHPV---------- 60 (153)
T ss_pred ceeeccccchHHHHHHHHHHhhccccchhhHHHHHHHH-----hhheeee------eCCcEEEEEeeccc----------
Confidence 589999999999999988754321 1122222221 1222222 38999999998732
Q ss_pred ccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 89 LSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 89 ~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
...+.+.+..++|+|+|||+|+|..|+..++..|++. |++++++.+. .+..|++++||+.+..
T Consensus 61 -------~~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~-gi~~lf~LTt----~~~~~F~~~GF~~vd~ 123 (153)
T COG1246 61 -------LEEDLGELRSLAVHPDYRGSGRGERLLERLLADAREL-GIKELFVLTT----RSPEFFAERGFTRVDK 123 (153)
T ss_pred -------CccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHc-CCceeeeeec----ccHHHHHHcCCeECcc
Confidence 2456677999999999999999999999999999999 9999998886 5678999999998653
No 47
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=99.46 E-value=3.5e-12 Score=98.17 Aligned_cols=140 Identities=13% Similarity=0.143 Sum_probs=88.7
Q ss_pred CCCcHHHHHHhhcccceeeeeeeecCCCCCCCC--ceEEEEEEEEeecCcccccccccccCCCCC---------------
Q 025384 35 IRYESEFFQNVVNARDIVSWGAVDRSRPNGHSD--ELIGFVTARIVQANESEIGDLLSYDSAKSD--------------- 97 (253)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 97 (253)
++.+++.+...+..+....|+... ++ +++|.+.+..++..+.+.+..+..+..++.
T Consensus 11 YrnsPnDL~~LlDaP~h~l~~l~~-------~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~ 83 (196)
T PF13718_consen 11 YRNSPNDLQLLLDAPNHRLFVLLQ-------PGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDP 83 (196)
T ss_dssp SSB-HHHHHHHHH-TTEEEEEEE--------SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-T
T ss_pred cCCCHHHHHHHhcCCcceeehhcc-------CCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCH
Confidence 445689999999999999998886 67 999999999887766654443333333333
Q ss_pred ----CcEEEEEEEEEccCccccCHHHHHHHHHHHHHh-------------------------cCCCccEEEEEEEecCHH
Q 025384 98 ----QTLVYILTLGVVDTYRNLGIASSLISEVIKYAS-------------------------NIPTCRALYLHVISYNIP 148 (253)
Q Consensus 98 ----~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~-------------------------~~~g~~~i~l~v~~~N~~ 148 (253)
...+.|.+|+|+|++|++|+|+++++.+++++. .. ++..+-.. .--+..
T Consensus 84 ~f~~l~g~RIvRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~vDylGtS-FG~t~~ 161 (196)
T PF13718_consen 84 EFAQLSGARIVRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPP-GVDYLGTS-FGATPE 161 (196)
T ss_dssp TGGGSEEEEEEEEEE-CCC-SSSHHHHHHHHHHHT------------------------------S-SEEEEE-EE--HH
T ss_pred HHHhhcceeEEEEEEChhhhcCCHHHHHHHHHHHHHhhhccccccccccccccccccccccccc-CCCEEEec-cCCCHH
Confidence 347899999999999999999999999999993 34 56554333 334678
Q ss_pred HHHHHHhCCCEEEEEEcceEEeCCeeeeeEEEEEEec
Q 025384 149 AIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYIN 185 (253)
Q Consensus 149 a~~fy~k~GF~~~~~~~~~~~~~g~~~d~~~~~~~l~ 185 (253)
..+||.|+||.++..-..--...| ..+.+|.+.++
T Consensus 162 Ll~FW~k~gf~pv~l~~~~n~~SG--e~S~imlr~ls 196 (196)
T PF13718_consen 162 LLKFWQKNGFVPVYLGQTRNEASG--EHSAIMLRPLS 196 (196)
T ss_dssp HHHHHHCTT-EEEEE-SS--TTT-----EEEEEEE--
T ss_pred HHHHHHHCCcEEEEEecCcccccC--ceeeeEEeecC
Confidence 999999999999775543333446 57788887764
No 48
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.45 E-value=1.1e-12 Score=109.27 Aligned_cols=120 Identities=18% Similarity=0.163 Sum_probs=87.9
Q ss_pred EeCCCCCHHHHHHHHHccCCC----CCcHHHHHHhhcc--cceeeeeeeecCCCCCCCCceEEEEEEEEeecCccccccc
Q 025384 15 RPIRPSDLMILQQLHADAFPI----RYESEFFQNVVNA--RDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDL 88 (253)
Q Consensus 15 r~~~~~D~~~l~~l~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~ 88 (253)
.+++++|++++.++...++.. .|+.++....... .....+++.+ ++++||++.+....
T Consensus 4 ~~l~~~d~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~vG~~~~~~~~--------- 67 (292)
T TIGR03448 4 AALDADLRRDVRELLAAATAVDGVAPVSEQVLRGLREPGAGHTRHLVAVD-------SDPIVGYANLVPAR--------- 67 (292)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHhhccccCCCCceEEEEEE-------CCEEEEEEEEEcCC---------
Confidence 357889999999998865432 3555554433221 1233455554 78999999876421
Q ss_pred ccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 89 LSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 89 ~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
....++..++|+|+|||+|||++|++.+++.+. ..+.+.+...|.++++||+++||+..+..
T Consensus 68 ---------~~~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~-----~~~~~~~~~~n~~a~~fy~~~Gf~~~~~~ 129 (292)
T TIGR03448 68 ---------GTDPAMAELVVHPAHRRRGIGRALIRALLAKGG-----GRLRVWAHGDLPAARALASRLGLVPTREL 129 (292)
T ss_pred ---------CCcceEEEEEECHhhcCCCHHHHHHHHHHHhcc-----CceEEEEcCCCHHHHHHHHHCCCEEccEE
Confidence 111357789999999999999999999998764 35778888899999999999999987654
No 49
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=99.44 E-value=7.4e-13 Score=119.56 Aligned_cols=228 Identities=13% Similarity=0.093 Sum_probs=153.2
Q ss_pred CceEEEeCCCCCHHHHHHHHHccCC------CCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcc
Q 025384 10 PTICYRPIRPSDLMILQQLHADAFP------IRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANES 83 (253)
Q Consensus 10 ~~i~ir~~~~~D~~~l~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~ 83 (253)
+.+.+..+...|+-.-.++..+.|+ +..+++.+..++..+....+++.. .++.+|+.+.+...+..+.
T Consensus 423 ~~~~~~~~~~~~~~~~ee~Lr~~~gllV~AHYRnsP~DL~~L~DaP~h~~~al~~------~~~~~va~~qva~EG~l~~ 496 (758)
T COG1444 423 GSLEILEVDQRDLLFDEELLRQVYGLLVSAHYRNSPNDLRRLLDAPHHHIFALRA------PEGKPVAVWQVAEEGGLSD 496 (758)
T ss_pred cceeeeeccHHhhhhCHHHHHHHHhHHhhhhccCCHHHHHHHhcCCCCeeEEEEc------CCCceEEEEEeeccCCCcH
Confidence 4455555554444333444444433 345588999999888888888876 3458888888877666655
Q ss_pred cccccccccCCCCC-------------------CcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEe
Q 025384 84 EIGDLLSYDSAKSD-------------------QTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVIS 144 (253)
Q Consensus 84 ~~~~~~~~~~~~~~-------------------~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~ 144 (253)
+.++ ...+...+. -..+.|.+|+|||++|++|||+.+++.+.+++.+ |+..+.. ..-
T Consensus 497 ~~i~-~~~~g~r~~GnlIp~~l~~~~~~~~fa~l~G~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~~--~~Dwlgv-sFG 572 (758)
T COG1444 497 ELID-IWLGGRRPRGNLIPDLLAKHHRDPEFAKLVGWRIVRIAVHPELQRMGIGSRLLALLIEEARK--GLDWLGV-SFG 572 (758)
T ss_pred HHHH-HHhcCCCCCCcccHHHHHHhhcchhhcccceeeEEEEEeCHHHHhcCHHHHHHHHHHHHHhc--CCCEEee-ccC
Confidence 5544 222222222 2368899999999999999999999999999972 4544332 234
Q ss_pred cCHHHHHHHHhCCCEEEEEEcceEEeCCeeeeeEEEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 025384 145 YNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYINGGRSPCSPLELVTVAVSYMRRGLNSVAARLRKNEEKWPK 224 (253)
Q Consensus 145 ~N~~a~~fy~k~GF~~~~~~~~~~~~~g~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (253)
.++...+||.||||.++...+..-...| +...+|.+.+++....+... +...|.++++..+......++....+
T Consensus 573 ~t~~L~rFW~rnGF~pVhls~~rn~~SG--eys~i~lkpLs~~~~~~~~~----a~~~f~~rl~~~l~~~~~dl~~~~~~ 646 (758)
T COG1444 573 YTEELLRFWLRNGFVPVHLSPTRNASSG--EYTAIVLKPLSDAGKELVER----ANQEFRRRLLLLLSDTYRDLEPELAR 646 (758)
T ss_pred CCHHHHHHHHHcCeEEEEecCccCcCCC--ceeEEEEecCCHHHHHHHHH----HHHHHHHHHHHHhhhhhhcCCHHHHh
Confidence 5678999999999999886655544556 57788888887754333332 55667777888888888888832222
Q ss_pred -----ccc-cccCeeeeeec--CCccccccCcceeeC
Q 025384 225 -----WAK-CKESRRLVGTQ--GRRNLTAECTGCECV 253 (253)
Q Consensus 225 -----~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~ 253 (253)
|.. +.....+...| .+..|++|+.-||.|
T Consensus 647 lll~~~~~~~~~~~~l~~~~~~rl~~y~~g~~~y~~~ 683 (758)
T COG1444 647 LLLENATLSDDDWPELTGFQLDRLELYASGPVLYELV 683 (758)
T ss_pred hhhhccccCCCCCcccchhHHHHHHHHhcCcccHHHH
Confidence 322 32223444444 678899999888753
No 50
>PRK01346 hypothetical protein; Provisional
Probab=99.44 E-value=2e-12 Score=112.93 Aligned_cols=134 Identities=16% Similarity=0.118 Sum_probs=96.6
Q ss_pred CceEEEeCCCCCHHHHHHHHHccCCCCCcHHHHHHhhc-ccceeeeeeeecCCCCCCCCceEEEEEEEEeecCccccccc
Q 025384 10 PTICYRPIRPSDLMILQQLHADAFPIRYESEFFQNVVN-ARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDL 88 (253)
Q Consensus 10 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~ 88 (253)
+.+.||+++++|++++.++...+|....+.+....... ......+++.+ ++++||++.+....-
T Consensus 5 ~~~~iR~~~~~D~~~i~~L~~~~f~~~~~~~~~~~~~~~~~~~~~~va~~-------~~~lvg~~~~~~~~~-------- 69 (411)
T PRK01346 5 MAITIRTATEEDWPAWFRAAATGFGDSPSDEELEAWRALVEPDRTLGAFD-------GDEVVGTAGAFDLRL-------- 69 (411)
T ss_pred CCceeecCCHHHHHHHHHHHHHHcCCCCChHHHHHHHHhcCcCCeEEEEE-------CCEEEEEEEEecccc--------
Confidence 56889999999999999999999876543332222211 11223455555 889999988764210
Q ss_pred ccccCC-CCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcce
Q 025384 89 LSYDSA-KSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGF 167 (253)
Q Consensus 89 ~~~~~~-~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~ 167 (253)
... .......+|..++|+|+|||+|||++|++++++.+++. |+..+.|.+.. .+||+|+||+.......+
T Consensus 70 ---~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~-g~~~~~L~~~~-----~~~Y~r~Gf~~~~~~~~~ 140 (411)
T PRK01346 70 ---TVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRER-GEPVAALTASE-----GGIYGRFGYGPATYSQSL 140 (411)
T ss_pred ---ccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHC-CCcEEEEECCc-----hhhHhhCCCeeccceEEE
Confidence 000 11235688999999999999999999999999999998 88777777543 369999999987655433
No 51
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.42 E-value=8.6e-12 Score=93.97 Aligned_cols=148 Identities=18% Similarity=0.209 Sum_probs=108.6
Q ss_pred CceEEEeCCCCCHHHHHHHHHccCCCCCcHHHHHHhhc----ccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccc
Q 025384 10 PTICYRPIRPSDLMILQQLHADAFPIRYESEFFQNVVN----ARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEI 85 (253)
Q Consensus 10 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~ 85 (253)
+.+.||..++.|++.+.++..+.|... .+......+. ......+++.+ ++++||.+.+....-.
T Consensus 2 ~~~~ir~e~~~d~~~i~~~~~~aF~~~-~e~~~v~~lR~~~~~~~~LslVA~d-------~g~vvG~Il~s~v~~~---- 69 (171)
T COG3153 2 MMMLIRTETPADIPAIEALTREAFGPG-REAKLVDKLREGGRPDLTLSLVAED-------DGEVVGHILFSPVTVG---- 69 (171)
T ss_pred CccEEEecChhhHHHHHHHHHHHhhcc-hHHHHHHHHHhcCCcccceeEEEee-------CCEEEEEEEEeEEEec----
Confidence 457899999999999999999999832 2222222222 24456777776 7999999999875422
Q ss_pred cccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEc
Q 025384 86 GDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLH 165 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~ 165 (253)
.....+..+..++|+|++||+|||++|++..++.++.. |...+.+.=. -.+|.+.||+......
T Consensus 70 ---------g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~-G~~~v~vlGd------p~YY~rfGF~~~~~~~ 133 (171)
T COG3153 70 ---------GEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLA-GASAVVVLGD------PTYYSRFGFEPAAGAK 133 (171)
T ss_pred ---------CcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHC-CCCEEEEecC------cccccccCcEEccccc
Confidence 12335667888999999999999999999999999999 8887766433 3489999999977654
Q ss_pred ceEEeCCeeeeeEEEEEEecCC
Q 025384 166 GFYLINGQHYDSYLFVYYINGG 187 (253)
Q Consensus 166 ~~~~~~g~~~d~~~~~~~l~~~ 187 (253)
-+.. +-..+...|.+.+..+
T Consensus 134 l~~p--~~~~~~~fl~~~L~~~ 153 (171)
T COG3153 134 LYAP--GPVPDERFLALELGDG 153 (171)
T ss_pred cccC--CCCCCceEEEEEccCC
Confidence 3332 1134667888887664
No 52
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.42 E-value=2.1e-12 Score=91.27 Aligned_cols=133 Identities=18% Similarity=0.236 Sum_probs=97.5
Q ss_pred CCceEEEeCCCCCHHH-HHHHHHccCCC--CCcHHH---HHHhhcccc-eeeeeeeecCCCCCCCCceEEEEEEEEeecC
Q 025384 9 HPTICYRPIRPSDLMI-LQQLHADAFPI--RYESEF---FQNVVNARD-IVSWGAVDRSRPNGHSDELIGFVTARIVQAN 81 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~~-l~~l~~~~~~~--~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~ 81 (253)
+..+.+|++..+|+.. ..+++.+.-.. -..++| |...-...+ ....++.+ ...+++||.+.+.++..
T Consensus 4 P~~~~lR~L~~~D~~kGf~elL~qLT~vG~vt~e~F~krf~~mk~~~~~Y~i~Vied-----~~s~~vigtatL~IE~K- 77 (150)
T KOG3396|consen 4 PDGFKLRPLEEDDYGKGFIELLKQLTSVGVVTREQFEKRFEAMKKSGDWYYIVVIED-----KESEKVIGTATLFIERK- 77 (150)
T ss_pred CCceEEeecccccccchHHHHHHHHhhccccCHHHHHHHHHHHHhcCCcEEEEEEEe-----CCcCeEEEEEEEEEehh-
Confidence 4559999999999986 77777664322 111222 333333334 33333333 23689999999886321
Q ss_pred cccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEE
Q 025384 82 ESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCV 161 (253)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~ 161 (253)
.....+..++|..+.|++++||+++|+.|+..+.+.++.. |+-.+.|++.+.| +.||+|+||...
T Consensus 78 -----------fIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~l-gcYKi~LdC~~~n---v~FYeKcG~s~~ 142 (150)
T KOG3396|consen 78 -----------FIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSL-GCYKIILDCDPKN---VKFYEKCGYSNA 142 (150)
T ss_pred -----------hhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhc-CcEEEEEecchhh---hhHHHHcCcccc
Confidence 1233456778999999999999999999999999999999 9999999999988 569999999865
Q ss_pred E
Q 025384 162 R 162 (253)
Q Consensus 162 ~ 162 (253)
+
T Consensus 143 ~ 143 (150)
T KOG3396|consen 143 G 143 (150)
T ss_pred c
Confidence 4
No 53
>PRK13688 hypothetical protein; Provisional
Probab=99.34 E-value=1.4e-11 Score=92.78 Aligned_cols=115 Identities=17% Similarity=0.242 Sum_probs=78.2
Q ss_pred EEeCCCCCHHHHHHHHHccCCCCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccccC
Q 025384 14 YRPIRPSDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDS 93 (253)
Q Consensus 14 ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~ 93 (253)
+|++..+|+.++.++....|.. ......+.+.+ ++++||++.+..... .....
T Consensus 20 ~~~~~~~dl~~l~~l~~~~f~~------------~~~~~~~~~~~-------~~~~VG~~~l~~~dg---~~~~~----- 72 (156)
T PRK13688 20 FREFGNQELSMLEELQANIIEN------------DSESPFYGIYY-------GDSLVARMSLYKKGG---VEEPY----- 72 (156)
T ss_pred HHHhcHHHHHHHHhhhhhEeec------------CCCCCEEEEEE-------CCEEEEEEEEEecCC---ccccc-----
Confidence 4777788888888887776631 12334455555 899999887753211 11100
Q ss_pred CCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 94 AKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 94 ~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
.......++|..++|+|+|||+|||++|++.+.+ . ++. +.+...| .+.+||+|+||+..+..
T Consensus 73 ~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~~----~-~~~---~~~~~~~-~a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 73 FEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAKS----F-QLP---IKTIARN-KSKDFWLKLGFTPVEYK 134 (156)
T ss_pred ccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHH----h-CCe---EEEEecc-chHHHHHhCCCEEeEEe
Confidence 1133566789999999999999999999986543 3 332 3444556 57899999999998876
No 54
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=99.31 E-value=1.6e-11 Score=92.08 Aligned_cols=124 Identities=22% Similarity=0.319 Sum_probs=94.3
Q ss_pred CCHHHHHHHHHccCC-------CCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCccccccccccc
Q 025384 20 SDLMILQQLHADAFP-------IRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYD 92 (253)
Q Consensus 20 ~D~~~l~~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~ 92 (253)
+|++....|...... ..|.+.--...+.......+++.+ ..+++|||..+...-+
T Consensus 54 ~~ldw~f~L~k~nm~~~Y~qs~~Gw~~~~K~~El~~~~~~Yi~a~~------~~~~~vgf~~Frf~vd------------ 115 (202)
T KOG2488|consen 54 EDLDWCFSLFKKNMGAMYRQSSWGWDDNSKAKELRNRKLRYICAWN------NKSKLVGFTMFRFTVD------------ 115 (202)
T ss_pred HHHHHHHHHHHhhhHHHhhhcccccCchhHHHHHhhccceEEEEEc------CCCceeeEEEEEEEcc------------
Confidence 556666666555322 235555455556666667777776 2348999999985321
Q ss_pred CCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEc
Q 025384 93 SAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLH 165 (253)
Q Consensus 93 ~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~ 165 (253)
.....+|+..+-|.++|||+|||+.||+.+...+... ..+.|.|.|...|.+|++||+++||......+
T Consensus 116 ---~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~-~~~kVmLTVf~~N~~al~Fy~~~gf~~~~~sp 184 (202)
T KOG2488|consen 116 ---TGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSR-HMRKVMLTVFSENIRALGFYHRLGFVVDEESP 184 (202)
T ss_pred ---cCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHH-HhhhheeeeecccchhHHHHHHcCcccCCCCC
Confidence 2345789999999999999999999999999999888 88999999999999999999999999755443
No 55
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.30 E-value=2e-11 Score=82.55 Aligned_cols=61 Identities=21% Similarity=0.252 Sum_probs=51.8
Q ss_pred EEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 101 VYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 101 ~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
..|..+.|+|++||+|+|+.++..+.+.+.+. |. ...+.+..+|.+|+++|+|+||+....
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~-g~-~~~l~v~~~N~~s~~ly~klGf~~~~~ 82 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLER-GK-TPFLYVDADNEASIRLYEKLGFREIEE 82 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHT-TS-EEEEEEETT-HHHHHHHHHCT-EEEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhC-CC-cEEEEEECCCHHHHHHHHHcCCEEEEE
Confidence 34889999999999999999999999998887 75 467899999999999999999998754
No 56
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.26 E-value=5.3e-11 Score=98.48 Aligned_cols=73 Identities=22% Similarity=0.288 Sum_probs=62.9
Q ss_pred CCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEec
Q 025384 66 SDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISY 145 (253)
Q Consensus 66 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~ 145 (253)
++++||++.+.. ..+..++|+|+|||+|+|++|++++++++++. |+..+.+.+...
T Consensus 14 ~~~iVG~~~l~~-----------------------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~-g~~~i~L~t~~~ 69 (297)
T cd02169 14 AGELIATGSIAG-----------------------NVLKCVAVCPKYQGEGLALKIVSELINKAYEE-GIFHLFLFTKPK 69 (297)
T ss_pred CCEEEEEEEecc-----------------------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHC-CCCEEEEEEccc
Confidence 799999987741 13789999999999999999999999999999 999999988655
Q ss_pred CHHHHHHHHhCCCEEEEEEc
Q 025384 146 NIPAIHLYKKMSFKCVRRLH 165 (253)
Q Consensus 146 N~~a~~fy~k~GF~~~~~~~ 165 (253)
| .+||+|+||+..+...
T Consensus 70 ~---~~fYek~GF~~~~~~~ 86 (297)
T cd02169 70 N---AKFFRGLGFKELANAS 86 (297)
T ss_pred H---HHHHHHCCCEEecccC
Confidence 4 6899999999988443
No 57
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=99.23 E-value=1.3e-10 Score=86.17 Aligned_cols=136 Identities=13% Similarity=0.190 Sum_probs=95.7
Q ss_pred CCceEEEeCCCCCHHHHHHHHHccCC-----------CCCc----HHHHHHhhccc----------ceeeeeeeecCCCC
Q 025384 9 HPTICYRPIRPSDLMILQQLHADAFP-----------IRYE----SEFFQNVVNAR----------DIVSWGAVDRSRPN 63 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~~l~~l~~~~~~-----------~~~~----~~~~~~~~~~~----------~~~~~~~~~~~~~~ 63 (253)
|..+.++..+..|.+++.++..+... ..++ .+|+....... ....+.++.
T Consensus 1 me~~~l~~p~L~~k~a~le~~~e~~~~~~~~~~~~~~~~~~~~~fed~L~~~~~~~~~~~~~~g~V~~~~y~~v~----- 75 (174)
T COG3981 1 MEEMKLRRPTLKDKDAFLEMKKEFLTDGSTEAGAAWKADYEQEDFEDWLEDLTRQEPGNNLPEGWVPASTYWAVD----- 75 (174)
T ss_pred CCcccccCCchhhHHHHHHHHHhhhhcCCcccCceeecccccccHHHHHHHHhccCCCcCCCCCceeceeEEEEe-----
Confidence 34577888888999999888765321 1221 23444322211 122233333
Q ss_pred CCCCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEE
Q 025384 64 GHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVI 143 (253)
Q Consensus 64 ~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~ 143 (253)
.++++||++.++..-...- ....++. +..|.|+.||+|+|+++|+.+++.|++. |++.|.+.+.
T Consensus 76 -~d~~ivG~i~lRh~Ln~~l----------l~~gGHI----GY~VrPseR~KGYA~emLkl~L~~ar~l-gi~~Vlvtcd 139 (174)
T COG3981 76 -EDGQIVGFINLRHQLNDFL----------LEEGGHI----GYSVRPSERRKGYAKEMLKLALEKAREL-GIKKVLVTCD 139 (174)
T ss_pred -cCCcEEEEEEeeeecchHH----------HhcCCcc----cceeChhhhccCHHHHHHHHHHHHHHHc-CCCeEEEEeC
Confidence 3799999999986321100 0012232 5579999999999999999999999999 9999999999
Q ss_pred ecCHHHHHHHHhCCCEEEEEEc
Q 025384 144 SYNIPAIHLYKKMSFKCVRRLH 165 (253)
Q Consensus 144 ~~N~~a~~fy~k~GF~~~~~~~ 165 (253)
.+|.+|.+..+++|=..+.+..
T Consensus 140 ~dN~ASrkvI~~NGGile~~~~ 161 (174)
T COG3981 140 KDNIASRKVIEANGGILENEFF 161 (174)
T ss_pred CCCchhhHHHHhcCCEEeEEEc
Confidence 9999999999999999877664
No 58
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=99.17 E-value=3.7e-10 Score=89.47 Aligned_cols=80 Identities=16% Similarity=0.202 Sum_probs=68.9
Q ss_pred CCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEec
Q 025384 66 SDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISY 145 (253)
Q Consensus 66 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~ 145 (253)
+|+||..+.... .......|.+++++|+|||+|+|+.++.++....-.. |. ...|.+...
T Consensus 185 d~~iVa~A~t~a------------------~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~e-Gk-~~~L~~~~~ 244 (268)
T COG3393 185 DGKIVAKAETAA------------------ENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAE-GK-IPCLFVNSD 244 (268)
T ss_pred CCcEEEeeeccc------------------cCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhC-CC-eeEEEEecC
Confidence 569999887763 3467788999999999999999999999998887777 64 667888899
Q ss_pred CHHHHHHHHhCCCEEEEEEc
Q 025384 146 NIPAIHLYKKMSFKCVRRLH 165 (253)
Q Consensus 146 N~~a~~fy~k~GF~~~~~~~ 165 (253)
|..|++.|+|.||+..|...
T Consensus 245 N~~A~~iY~riGF~~~g~~~ 264 (268)
T COG3393 245 NPVARRIYQRIGFREIGEFR 264 (268)
T ss_pred CHHHHHHHHHhCCeecceEE
Confidence 99999999999999988654
No 59
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=99.10 E-value=2.7e-09 Score=89.77 Aligned_cols=81 Identities=17% Similarity=0.240 Sum_probs=67.9
Q ss_pred eeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHh
Q 025384 51 IVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYAS 130 (253)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~ 130 (253)
...+++.+ ++++||++.+.. . .+..++|+|+|||+|+|++|+.++++.++
T Consensus 31 d~~vv~~~-------~~~lVg~g~l~g---------------------~--~ik~vaV~~~~rG~Glg~~L~~~L~~~a~ 80 (332)
T TIGR00124 31 EIFIAVYE-------DEEIIGCGGIAG---------------------N--VIKCVAIDESLRGEGLALQLMTELENLAY 80 (332)
T ss_pred CEEEEEEE-------CCEEEEEEEEec---------------------C--EEEEEEEcHHHcCCCHHHHHHHHHHHHHH
Confidence 34455555 899999988741 1 27799999999999999999999999999
Q ss_pred cCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEc
Q 025384 131 NIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLH 165 (253)
Q Consensus 131 ~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~ 165 (253)
+. |+..+.+.+...| .+||+++||...+...
T Consensus 81 ~~-G~~~l~l~Tk~~~---~~fy~klGF~~i~~~~ 111 (332)
T TIGR00124 81 EL-GRFHLFIFTKPEY---AALFEYCGFKTLAEAK 111 (332)
T ss_pred Hc-CCCEEEEEECchH---HHHHHHcCCEEeeeec
Confidence 99 9999998887655 5799999999988765
No 60
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=98.99 E-value=4e-10 Score=81.51 Aligned_cols=150 Identities=21% Similarity=0.226 Sum_probs=100.9
Q ss_pred CCceEEEeCCCCCHHHHHHHHHccCCCCCcH--HHHHHhhcccceeeeeeee--cCCCCCCCCceEEEEEEEEeecCccc
Q 025384 9 HPTICYRPIRPSDLMILQQLHADAFPIRYES--EFFQNVVNARDIVSWGAVD--RSRPNGHSDELIGFVTARIVQANESE 84 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ivG~~~~~~~~~~~~~ 84 (253)
...+.||+.-++|..++..+-...||.+... +-....+.+....+-...+ .....-..+.+||++..... +.+
T Consensus 9 p~~~~irp~i~e~~q~~~~Lea~~FPe~erasfeii~~r~i~~pevc~glf~~~~h~~~~~~~tLIghIigs~~---~~E 85 (190)
T KOG4144|consen 9 PEAPRIRPGIPESCQRRHTLEASEFPEDERASFEIIRERFISVPEVCPGLFDEIRHFLTLCEGTLIGHIIGSLW---DKE 85 (190)
T ss_pred cccccCCCCChHHHHHHhccccccCChhHHHHHHHHHHHHhcchhhcchhhhhHHhhhhhccccceehhhcccC---cch
Confidence 3456799999999999999999999875432 2222222221111111111 00000126889999887653 233
Q ss_pred ccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 85 IGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
....-........++...|+.++|+|+||.+|.|..|+...+++...+.-.+++.|.+. ++.+.||++.||+.+|..
T Consensus 86 ~lt~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h---~pLvPFYEr~gFk~vgp~ 162 (190)
T KOG4144|consen 86 RLTQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICH---DPLVPFYERFGFKAVGPC 162 (190)
T ss_pred hhhHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeec---CCccchhHhcCceeeccc
Confidence 33334455566677889999999999999999999999998888887745555555443 467899999999998863
No 61
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=98.89 E-value=7.8e-08 Score=69.33 Aligned_cols=147 Identities=16% Similarity=0.217 Sum_probs=99.4
Q ss_pred CCceEEEeCCCCCHHHHHHHHHcc----------CCCCCcHHHHHHhhcccceeeeeeeecCCCCCCC---CceEEEEEE
Q 025384 9 HPTICYRPIRPSDLMILQQLHADA----------FPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHS---DELIGFVTA 75 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~~l~~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ivG~~~~ 75 (253)
..++.+.|.++.+++..++|...- .....+.+.-..+..+.+...|+..+..-..... +-.||=+.+
T Consensus 11 ~~kvILVPYe~~HV~kYHeWMknEelr~LT~SE~LtLdeEyeMQ~sW~~DeDKlTFIVLdaE~~ea~~~ev~~MvGDvNl 90 (185)
T KOG4135|consen 11 GKKVILVPYEPCHVPKYHEWMKNEELRRLTASEPLTLDEEYEMQKSWREDEDKLTFIVLDAEMNEAGEDEVDHMVGDVNL 90 (185)
T ss_pred cceEEEeeccccchhHHHhHhhhHHHHHhhcCCCcchhHHHHhhhhhccCCcceEEEEEechhcccCchhHhhhccceee
Confidence 456788999999999999985431 1112223344455566777777776432221111 235666555
Q ss_pred EEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHh
Q 025384 76 RIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK 155 (253)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k 155 (253)
.+....+.+ ........+.+.-+.-.|..||+|+|++++.+++.|+....++.+..+.+..+|.+++++++|
T Consensus 91 Flt~~~~~~--------n~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk 162 (185)
T KOG4135|consen 91 FLTTSPDTE--------NPSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKK 162 (185)
T ss_pred EEecCCCcC--------CcccceeeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHH
Confidence 443222211 011112234444445589999999999999999999999989999999999999999999999
Q ss_pred CCCEEEEE
Q 025384 156 MSFKCVRR 163 (253)
Q Consensus 156 ~GF~~~~~ 163 (253)
++|..+..
T Consensus 163 ~~f~q~~~ 170 (185)
T KOG4135|consen 163 FLFTQVFY 170 (185)
T ss_pred hhheeeee
Confidence 99998775
No 62
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.86 E-value=5.7e-08 Score=78.85 Aligned_cols=88 Identities=15% Similarity=0.183 Sum_probs=62.7
Q ss_pred eeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhc
Q 025384 52 VSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASN 131 (253)
Q Consensus 52 ~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~ 131 (253)
..+++.. ++++|..+......+. .....|.++|+|||+|+|+.+..+++.++.+
T Consensus 166 ~Gf~i~~-------~~~iVs~~~s~~~~~~-------------------~~EI~I~T~~~yR~kGLA~~~aa~~I~~Cl~ 219 (265)
T PF12746_consen 166 FGFCILH-------DGEIVSGCSSYFVYEN-------------------GIEIDIETHPEYRGKGLATAVAAAFILECLE 219 (265)
T ss_dssp -EEEEEE-------TTEEEEEEEEEEEETT-------------------EEEEEEEE-CCCTTSSHHHHHHHHHHHHHHH
T ss_pred cEEEEEE-------CCEEEEEEEEEEEECC-------------------EEEEEEEECHHhhcCCHHHHHHHHHHHHHHH
Confidence 5666666 8888877655543221 2244889999999999999999999999999
Q ss_pred CCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcceEE
Q 025384 132 IPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYL 169 (253)
Q Consensus 132 ~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~~~ 169 (253)
. |+.. .-...|.+|+++-+|+||+......-|+.
T Consensus 220 ~-~l~P---~WDc~N~~S~~lA~kLGf~~~~~Y~~Y~v 253 (265)
T PF12746_consen 220 N-GLYP---SWDCHNLASIALAEKLGFHFDFEYTAYEV 253 (265)
T ss_dssp T-T-EE---E-EESSHHHHHHHHHCT--EEEEEEEE--
T ss_pred C-CCCc---CeeCCCHHHHHHHHHcCCcccceeeeeee
Confidence 9 6544 33337999999999999999887765554
No 63
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=98.80 E-value=4.5e-08 Score=69.02 Aligned_cols=141 Identities=16% Similarity=0.149 Sum_probs=96.2
Q ss_pred CCceEEEeCCCCCHHHHHHHHHccCC-CCCc-HHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCccccc
Q 025384 9 HPTICYRPIRPSDLMILQQLHADAFP-IRYE-SEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIG 86 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~~l~~l~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~ 86 (253)
.+.+.++.....|.+++..+.++.-- ..|- .+-+.....+. |.+.. +|.+.|++...- .++...
T Consensus 5 smp~~~~D~~apd~aavLaLNNeha~elswLe~erL~~l~~eA----F~ArR-------~G~l~afl~tFd---~~a~yd 70 (167)
T COG3818 5 SMPILIRDVRAPDLAAVLALNNEHALELSWLELERLYRLYKEA----FVARR-------DGNLAAFLVTFD---SSARYD 70 (167)
T ss_pred ccceehhhhcCCchhhHHhccchhhhhccccCHHHHHHHHHHH----HHHhh-------ccchhhheeecc---ccccCC
Confidence 35577888888999999999876422 2232 22222222211 33332 566666654431 122111
Q ss_pred ccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEE--ecCHHHHHHHHhCCCEEEEEE
Q 025384 87 DLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVI--SYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~--~~N~~a~~fy~k~GF~~~~~~ 164 (253)
...-......-....|+.++.|....||.|+|++|.+.+.++|... |...+.++|. +.|+++-.|+-.+||.++|.-
T Consensus 71 SpNFlWFrErYe~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~a-gy~~~tCEVn~DppnpasdaFHaalGF~eVG~a 149 (167)
T COG3818 71 SPNFLWFRERYENFFYVDRVVVASRARGRGVARALYADLFSYAELA-GYPYLTCEVNLDPPNPASDAFHAALGFHEVGQA 149 (167)
T ss_pred CCceeehhhhCCceEEEEEEEEEecccccchHHHHHHHHHHHHHhc-CCceEEEEecCCCCChHHHHHhhhcCceEccce
Confidence 1111112233456789999999999999999999999999999999 9999998885 569999999999999999864
No 64
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.80 E-value=1.8e-08 Score=74.46 Aligned_cols=130 Identities=14% Similarity=0.255 Sum_probs=86.3
Q ss_pred CCCceEEEeCC--CCCHHHHHHHHHccCCCCCc--HHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcc
Q 025384 8 RHPTICYRPIR--PSDLMILQQLHADAFPIRYE--SEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANES 83 (253)
Q Consensus 8 ~~~~i~ir~~~--~~D~~~l~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~ 83 (253)
.+.++.+.++. ++-+++-..+.++.|+.... ..-+.+........ +.... +...++||.+-+..
T Consensus 9 S~~~l~~vPiH~rPELlk~~~~LIN~eWPRS~TsR~hSL~~ScDs~P~s-L~Ll~-----E~~~~VigH~rLS~------ 76 (225)
T KOG3397|consen 9 SMPDLFFVPLHDRPELLKESMTLINSEWPRSDTSREHSLKKSCDSPPMS-LLLLN-----EENDEVLGHSRLSH------ 76 (225)
T ss_pred CCCcceeEeccccHHHHHHHHHHHhccCCccchhhhhhhhcccCCCCee-eeeec-----ccccceeeeecccc------
Confidence 45567777754 34455566666666654321 11222222111111 11111 23567777766554
Q ss_pred cccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 84 EIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
.....+..++.++.|+.+.||+|.|+.|++.+++|++.. |++.++|.+... .+||+++||+...-
T Consensus 77 ----------i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~-gf~~~yLsT~DQ----~~FYe~lGYe~c~P 141 (225)
T KOG3397|consen 77 ----------LPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREK-GFNEAYLSTDDQ----CRFYESLGYEKCDP 141 (225)
T ss_pred ----------CCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHh-hhhheeeecccc----hhhhhhhcccccCc
Confidence 334567788999999999999999999999999999999 999999998844 58999999987443
Q ss_pred E
Q 025384 164 L 164 (253)
Q Consensus 164 ~ 164 (253)
.
T Consensus 142 i 142 (225)
T KOG3397|consen 142 I 142 (225)
T ss_pred e
Confidence 3
No 65
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.70 E-value=1.4e-07 Score=83.82 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=46.4
Q ss_pred EccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 108 VVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 108 V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
++++|||+|+|++|++++++.|++. |++.+.+. .|..+++||+|+||+..+.
T Consensus 465 ~~~~~rg~GiG~~Ll~~ae~~Ar~~-G~~~i~v~---s~~~A~~FY~klGf~~~g~ 516 (522)
T TIGR01211 465 GDDEWQHRGYGRRLLEEAERIAAEE-GSEKILVI---SGIGVREYYRKLGYELDGP 516 (522)
T ss_pred CChhHhCcCHHHHHHHHHHHHHHHC-CCCEEEEe---eCchHHHHHHHCCCEEEcc
Confidence 3589999999999999999999999 99998863 3789999999999998664
No 66
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.67 E-value=1.9e-08 Score=72.42 Aligned_cols=137 Identities=18% Similarity=0.210 Sum_probs=86.5
Q ss_pred EEeCCCCCHHHHHHHHHccCCC----CCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccc
Q 025384 14 YRPIRPSDLMILQQLHADAFPI----RYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLL 89 (253)
Q Consensus 14 ir~~~~~D~~~l~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~ 89 (253)
+..++...+-++..++.+.|-. +|.+-.=...+ ....+.+... .+|++++++-+.+....
T Consensus 10 ~~~Lt~~ely~LlkLRv~VFVVEQ~CPY~E~Dg~Dl~-~~~~Hl~~~~-------~~g~LvAyaRLl~~~~~-------- 73 (155)
T COG2153 10 FNDLTVRELYELLKLRVDVFVVEQNCPYPELDGKDLL-GDTRHLLGWT-------PDGELVAYARLLPPGAE-------- 73 (155)
T ss_pred hhhcCHHHHHHHHHhheeEEEEecCCCCcCcCCcccc-cccceEEEEc-------CCCeEEEEEecCCCCCC--------
Confidence 4455666666677777777643 23221111111 1112223222 28999999877643211
Q ss_pred cccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcceEE
Q 025384 90 SYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYL 169 (253)
Q Consensus 90 ~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~~~ 169 (253)
...+.|.++.|.|++||+|+|.+|+.++++.+...+--+.+++..- .....||.+.||+.++.. |.
T Consensus 74 --------~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQ---ahLq~fYa~~GFv~~~e~---yl 139 (155)
T COG2153 74 --------YEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQ---AHLQDFYASFGFVRVGEE---YL 139 (155)
T ss_pred --------cCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehH---HHHHHHHHHhCcEEcCch---hh
Confidence 1125589999999999999999999999999999855566666543 357899999999987643 44
Q ss_pred eCCeeeeeEEEEE
Q 025384 170 INGQHYDSYLFVY 182 (253)
Q Consensus 170 ~~g~~~d~~~~~~ 182 (253)
.+| ...+-|.+
T Consensus 140 edG--IpHv~M~r 150 (155)
T COG2153 140 EDG--IPHVGMIR 150 (155)
T ss_pred cCC--CCchhhhh
Confidence 455 34444443
No 67
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.65 E-value=9e-08 Score=63.78 Aligned_cols=74 Identities=16% Similarity=0.199 Sum_probs=63.8
Q ss_pred CCCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEe
Q 025384 65 HSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVIS 144 (253)
Q Consensus 65 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~ 144 (253)
.+|.+|.++.... ...+..-++.|+|||+|+.+.++....+++.+. |+ -++.+|..
T Consensus 6 peG~PVSW~lmdq----------------------tge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~-g~-P~Y~hv~~ 61 (89)
T PF08444_consen 6 PEGNPVSWSLMDQ----------------------TGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKL-GF-PFYGHVDE 61 (89)
T ss_pred CCCCEeEEEEecc----------------------cccccccccCHhHhcCCHHHHHHHHHHHHHHHC-CC-CeEeehHh
Confidence 4788998877652 233567789999999999999999999999999 87 68999999
Q ss_pred cCHHHHHHHHhCCCEEEE
Q 025384 145 YNIPAIHLYKKMSFKCVR 162 (253)
Q Consensus 145 ~N~~a~~fy~k~GF~~~~ 162 (253)
.|+.++++.+++||....
T Consensus 62 ~N~~~~r~~~~lg~~~~p 79 (89)
T PF08444_consen 62 DNEASQRLSKSLGFIFMP 79 (89)
T ss_pred ccHHHHHHHHHCCCeecC
Confidence 999999999999998753
No 68
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.59 E-value=4.1e-07 Score=56.68 Aligned_cols=58 Identities=29% Similarity=0.405 Sum_probs=49.2
Q ss_pred CCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEE
Q 025384 66 SDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYL 140 (253)
Q Consensus 66 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l 140 (253)
+++++|++.+.... ......++..++|+|++||+|+|+.++..+++++.+. |++.+.+
T Consensus 7 ~~~~ig~~~~~~~~----------------~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~-~~~~v~~ 64 (65)
T cd04301 7 DGEIVGFASLSPDG----------------SGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARER-GAKRLRL 64 (65)
T ss_pred CCEEEEEEEEEecC----------------CCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHc-CCcEEEe
Confidence 78999999987532 1346678888999999999999999999999999986 8888765
No 69
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.56 E-value=9.8e-07 Score=62.73 Aligned_cols=110 Identities=17% Similarity=0.237 Sum_probs=66.2
Q ss_pred eCCCCCHHHHHHHHHccCCCCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccccCCC
Q 025384 16 PIRPSDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDSAK 95 (253)
Q Consensus 16 ~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~ 95 (253)
.++++|.-++.+++ |. ...+.+.+.+. .....|++.- +++++|.+.+..
T Consensus 9 ~ls~Qd~iDL~KIw----p~-~~~~~l~~~l~-~~~~l~aArF-------NdRlLgAv~v~~------------------ 57 (128)
T PF12568_consen 9 TLSEQDRIDLAKIW----PQ-QDPEQLEQWLD-EGHRLFAARF-------NDRLLGAVKVTI------------------ 57 (128)
T ss_dssp S--HHHHHHHHHH-----TT-S-----------SSEEEEEEEE-------TTEEEEEEEEEE------------------
T ss_pred CCCHHHHHHHHHhC----CC-CCHHHHHHHhc-cCCeEEEEEe-------chheeeeEEEEE------------------
Confidence 34556666677666 32 23444555553 3445566665 999999998875
Q ss_pred CCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEe---cC-HHHHHHHHhCCCEE
Q 025384 96 SDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVIS---YN-IPAIHLYKKMSFKC 160 (253)
Q Consensus 96 ~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~---~N-~~a~~fy~k~GF~~ 160 (253)
.+..+.+..++|.+--|++|+|+.|++.+.+.+. +++...+.... .+ .....|...+||..
T Consensus 58 -~~~~~~L~~l~VRevTRrRGVG~yLlee~~rq~p---~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~ 122 (128)
T PF12568_consen 58 -SGQQAELSDLCVREVTRRRGVGLYLLEEVLRQLP---DIKHWWLADEGVEPQDRAVMAAFMQACGFSA 122 (128)
T ss_dssp -ETTEEEEEEEEE-TT-SSSSHHHHHHHHHHHHS----S--EEEE--TT-S--THHHHHHHHHHHT-EE
T ss_pred -cCcceEEeeEEEeeccccccHHHHHHHHHHHHCC---CCcEEEEecCCCcccchHHHHHHHHHcCccc
Confidence 3456779999999999999999999999998883 56666665442 23 34578999999954
No 70
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.36 E-value=1.5e-05 Score=52.57 Aligned_cols=66 Identities=21% Similarity=0.271 Sum_probs=49.4
Q ss_pred CCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEec
Q 025384 66 SDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISY 145 (253)
Q Consensus 66 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~ 145 (253)
+|+.+|++.... .+....+....|.|++||+|+|+.|+++++++|++. |.+- .+.
T Consensus 7 ~g~~~a~l~Y~~-------------------~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~-~~kv-----~p~ 61 (78)
T PF14542_consen 7 DGEEIAELTYRE-------------------DGGVIVITHTEVPPELRGQGIAKKLVEAALDYAREN-GLKV-----VPT 61 (78)
T ss_dssp STTEEEEEEEEE-------------------SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHT-T-EE-----EET
T ss_pred CCEEEEEEEEEe-------------------CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHC-CCEE-----EEE
Confidence 688999998863 456677889999999999999999999999999999 7532 234
Q ss_pred CHHHHHHHHhC
Q 025384 146 NIPAIHLYKKM 156 (253)
Q Consensus 146 N~~a~~fy~k~ 156 (253)
..-+.++++++
T Consensus 62 C~y~~~~~~~h 72 (78)
T PF14542_consen 62 CSYVAKYFRRH 72 (78)
T ss_dssp SHHHHHHHHH-
T ss_pred CHHHHHHHHhC
Confidence 44555665553
No 71
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=98.29 E-value=8e-06 Score=73.09 Aligned_cols=115 Identities=17% Similarity=0.210 Sum_probs=81.8
Q ss_pred cEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCC------------CccEE----------------------------
Q 025384 99 TLVYILTLGVVDTYRNLGIASSLISEVIKYASNIP------------TCRAL---------------------------- 138 (253)
Q Consensus 99 ~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~------------g~~~i---------------------------- 138 (253)
..+.|.+|+|||+|+++|+|++.++.+.+|....+ .+.++
T Consensus 613 ~GaRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~~~~i~e~~~~~~~~~k~v~e~~~vsllee~i~pR~~lppLL~~L~e 692 (1011)
T KOG2036|consen 613 SGARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGKFTSISEDVLAVDHSIKRVEEAEKVSLLEEQIKPRKDLPPLLLKLSE 692 (1011)
T ss_pred cCceEEEEEeccchhccCccHHHHHHHHHHHhccCCCccccccccCccccccchhhhhhhhhhhcccccCCCceeeEccc
Confidence 35789999999999999999999999998876641 01111
Q ss_pred -------EEEEEe-cCHHHHHHHHhCCCEEEEEEcceEEeCCeeeeeEEEEEEecCCCCCCCHHHHHHHHHHHHHHHHHH
Q 025384 139 -------YLHVIS-YNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYINGGRSPCSPLELVTVAVSYMRRGLNS 210 (253)
Q Consensus 139 -------~l~v~~-~N~~a~~fy~k~GF~~~~~~~~~~~~~g~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (253)
++.|.- --....+||+++||.++......-...| .+..+|-+.+++...+|-.. -+..|.+++++.
T Consensus 693 r~perldylGvSfGLT~~L~kFWk~~gF~PvylrQt~n~lTG--EHtcimLk~L~~~e~~wl~~----f~qdFr~Rf~~l 766 (1011)
T KOG2036|consen 693 RPPERLDYLGVSFGLTPSLLKFWKKNGFVPVYLRQTSNDLTG--EHTCIMLKTLEGDESGWLGA----FYQDFRRRFLKL 766 (1011)
T ss_pred CCCcccceeeecccCCHHHHHHHHhcCceeEEeecccccccc--ceeEEEEecCCCcccchHHH----HHHHHHHHHHHH
Confidence 111111 1245689999999999885543333456 57788999998877777664 456677777777
Q ss_pred HHHHHhhcC
Q 025384 211 VAARLRKNE 219 (253)
Q Consensus 211 ~~~~~~~~~ 219 (253)
++..+.++.
T Consensus 767 Ls~~F~~f~ 775 (1011)
T KOG2036|consen 767 LSYDFKKFT 775 (1011)
T ss_pred hhHHHhccC
Confidence 777777766
No 72
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.83 E-value=0.00045 Score=56.02 Aligned_cols=115 Identities=15% Similarity=0.229 Sum_probs=81.0
Q ss_pred ceEEEeCCCCCHHHHHHHHHccCCCCCcHHHHHHhh--cccceeeeeeeecCCCCCCCCceEEEEEEEEeecCccccccc
Q 025384 11 TICYRPIRPSDLMILQQLHADAFPIRYESEFFQNVV--NARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDL 88 (253)
Q Consensus 11 ~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~ 88 (253)
.+.+..+.++|...+..+.. ++.+.- -+.+...+++.. .+++++|++.++.-
T Consensus 3 ~~~~~~v~~~e~~k~~~i~~----------fL~~~~l~~d~~ve~~v~~~-----~~~~~iiacGsiaG----------- 56 (352)
T COG3053 3 NYTFSRVKRSEKKKMAEIAE----------FLHQNDLRVDTTVEYFVAIY-----RDNEEIIACGSIAG----------- 56 (352)
T ss_pred ceEEEEEccchhhHHHHHHH----------HHhhcCceecccceEEEEEE-----cCCCcEEEeccccc-----------
Confidence 45677888888776665531 111110 112222333322 14689999977641
Q ss_pred ccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcce
Q 025384 89 LSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGF 167 (253)
Q Consensus 89 ~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~ 167 (253)
. -+-.++|++.+||-|++-+|+.++++.+.+. |...+++.+-+.| ..|++.+||..+...++.
T Consensus 57 ----------n--vikcvAvs~s~qGeGl~lkl~TeLin~ay~~-g~~hLFiyTKp~~---~~lFk~~GF~~i~~~~~~ 119 (352)
T COG3053 57 ----------N--VIKCVAVSESLQGEGLALKLVTELINLAYER-GRTHLFIYTKPEY---AALFKQCGFSEIASAENV 119 (352)
T ss_pred ----------c--eeEEEEechhcccccHHHHHHHHHHHHHHHc-CCceEEEEechhH---HHHHHhCCceEeeccCce
Confidence 1 2668999999999999999999999999999 9999888887655 679999999998766544
No 73
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.80 E-value=3.3e-05 Score=53.97 Aligned_cols=44 Identities=32% Similarity=0.508 Sum_probs=40.9
Q ss_pred EEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCC
Q 025384 106 LGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSF 158 (253)
Q Consensus 106 l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF 158 (253)
++|+|++||+|+|+.|+..+++++... |+. .|..+..+|++.||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~-g~~--------~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKR-GIS--------LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHc-Cce--------ehHHHHHHHHhcCC
Confidence 899999999999999999999999997 765 77799999999999
No 74
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.78 E-value=8.6e-05 Score=61.64 Aligned_cols=62 Identities=16% Similarity=0.229 Sum_probs=53.4
Q ss_pred CCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 97 DQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 97 ~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
.-...+|..+++.|+|||+|..++|+.+.++..++. |+.-..|+.. +.+||+|.||+..+..
T Consensus 67 ~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~k-G~p~s~L~P~-----s~~iYrKfGye~asn~ 128 (389)
T COG4552 67 VLPTAGIAGVASAPTYRRRGALRALLAHSLREIARK-GYPVSALHPF-----SGGIYRKFGYEYASNY 128 (389)
T ss_pred eeeccceEEEEechhhccCcHHHHHHHHHHHHHHHc-CCeeEEeccC-----chhhHhhccccccceE
Confidence 345678999999999999999999999999999999 9888777655 5689999999986653
No 75
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=97.76 E-value=0.0015 Score=50.92 Aligned_cols=152 Identities=15% Similarity=0.224 Sum_probs=101.6
Q ss_pred ceEEEeCC-CCCHHHHHHHHHccCCCCCc----HHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccc
Q 025384 11 TICYRPIR-PSDLMILQQLHADAFPIRYE----SEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEI 85 (253)
Q Consensus 11 ~i~ir~~~-~~D~~~l~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~ 85 (253)
++.+|.++ +.++++..++....|..+-. .+.+. .+....-..+.++. .++++||.+...+ .
T Consensus 2 ~vvvrrl~dp~el~~~~dV~~~aWg~~d~~~~~~d~i~-al~~~GGlvlgAf~------~dg~lVGls~G~p-g------ 67 (266)
T COG3375 2 KVVVRRLTDPAELDEAEDVQASAWGSEDRDGAPADTIR-ALRYHGGLVLGAFS------ADGRLVGLSYGYP-G------ 67 (266)
T ss_pred ceeEEecCCHHHHHHHHHHHHHHhCccccccchHHHHH-HHHhcCCeEEEEEc------CCCcEEEEEeccC-C------
Confidence 45666654 68889999998888775322 22333 33444455566665 3569999987764 1
Q ss_pred cccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHH-HHhCCCEEEEEE
Q 025384 86 GDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHL-YKKMSFKCVRRL 164 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~f-y~k~GF~~~~~~ 164 (253)
........|-+.++|.|++++.|+|-+|-..--+++..+ |++.+...-.+-|.--.+| .-|+|-.-.--.
T Consensus 68 --------~r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~-G~tli~WTfDPl~alNA~fNi~KLGa~artYi 138 (266)
T COG3375 68 --------GRGGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSM-GYTLIAWTFDPLNALNARFNISKLGAIARTYI 138 (266)
T ss_pred --------cCCCceeeeeeehhccccccccchhhhhHHHHHHHHHhc-CeeeEEEecccchhhhhhcchhhhceeEEEee
Confidence 112334678889999999999999999988888999999 9998888777766432222 356666554445
Q ss_pred cceEEeC------CeeeeeEEEEEEec
Q 025384 165 HGFYLIN------GQHYDSYLFVYYIN 185 (253)
Q Consensus 165 ~~~~~~~------g~~~d~~~~~~~l~ 185 (253)
++||-.. |-..|.++-+..++
T Consensus 139 ~nfYg~m~dgINrGm~sDRlVaeWwl~ 165 (266)
T COG3375 139 KNFYGEMADGINRGMRSDRLVAEWWLN 165 (266)
T ss_pred ccccchhchhhcccccccceEEEEecC
Confidence 6666311 12237777777776
No 76
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.75 E-value=0.00013 Score=50.13 Aligned_cols=53 Identities=26% Similarity=0.282 Sum_probs=44.5
Q ss_pred CCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccE
Q 025384 66 SDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRA 137 (253)
Q Consensus 66 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~ 137 (253)
+|+.+|.+.... ...+...|..-+|.+++||||+|++|+..+++.|++. |.+-
T Consensus 23 ~G~~~~e~~y~~------------------~~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~-g~ki 75 (99)
T COG2388 23 EGEVIGEATYYD------------------RGENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREA-GLKI 75 (99)
T ss_pred CCcEEEEEEEec------------------CCCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHc-CCeE
Confidence 788899988774 2335667888899999999999999999999999998 7643
No 77
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=97.69 E-value=0.00057 Score=47.81 Aligned_cols=76 Identities=13% Similarity=0.142 Sum_probs=55.1
Q ss_pred CCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEec
Q 025384 66 SDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISY 145 (253)
Q Consensus 66 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~ 145 (253)
+|.+|||+.+.-.. ..+...-..+..+.|...|||+|+|++..+++-..+.. .-.+-+..+
T Consensus 45 ~~~~igf~l~L~~~--------------~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~g-----~w~Va~i~E 105 (143)
T COG5628 45 GGLPVGFALVLDLA--------------HSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAWG-----VWQVATVRE 105 (143)
T ss_pred CCceeeeeeeeccc--------------CCCCcccccchheEeeehhhccchhHHHHHHHHHHhhc-----eEEEEEecc
Confidence 89999999875311 11122223466788899999999999999888764432 445667889
Q ss_pred CHHHHHHHHhCCCEE
Q 025384 146 NIPAIHLYKKMSFKC 160 (253)
Q Consensus 146 N~~a~~fy~k~GF~~ 160 (253)
|.+|+.||++.-...
T Consensus 106 N~PA~~fwK~~~~t~ 120 (143)
T COG5628 106 NTPARAFWKRVAETY 120 (143)
T ss_pred CChhHHHHHhhhccc
Confidence 999999999976653
No 78
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=97.63 E-value=0.0018 Score=48.09 Aligned_cols=110 Identities=20% Similarity=0.232 Sum_probs=71.6
Q ss_pred CCceEEEeCCCCC---HHHHHHHHHccC--------CCCCcHHHHHHhhccccee---eeeeeecCCCCCCCCceEEEEE
Q 025384 9 HPTICYRPIRPSD---LMILQQLHADAF--------PIRYESEFFQNVVNARDIV---SWGAVDRSRPNGHSDELIGFVT 74 (253)
Q Consensus 9 ~~~i~ir~~~~~D---~~~l~~l~~~~~--------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ivG~~~ 74 (253)
...+....+..+| ++++..++++.+ ...|+.+|+...+..+... ...... ..++++|||+.
T Consensus 21 P~gF~W~~~dl~d~~~l~ely~lL~~nYVEDdd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~-----~~~~kLvgfIs 95 (162)
T PF01233_consen 21 PDGFEWSTLDLNDDEELKELYELLNENYVEDDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRV-----KSSKKLVGFIS 95 (162)
T ss_dssp STTEEEEE--TTSHHHHHHHHHHHHHHSSBTTTSSEEE---HHHHHHHHTSTT--GGGEEEEEE-----TTTTEEEEEEE
T ss_pred CCCCEEEecCCCCHHHHHHHHHHHHhcCccCCcceEEeeCCHHHHhheeeCcCCccceEEEEEE-----CCCCEEEEEEc
Confidence 3457777776655 455666666544 4578899999888876442 222221 13799999998
Q ss_pred EEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCc
Q 025384 75 ARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTC 135 (253)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~ 135 (253)
+.+.. ..-.......+.|-.++||...|.++++-.|++++...+-.. |+
T Consensus 96 aip~~-----------irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~-gI 144 (162)
T PF01233_consen 96 AIPAT-----------IRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQ-GI 144 (162)
T ss_dssp EEEEE-----------EEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTT-T-
T ss_pred cceEE-----------EEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhc-Cc
Confidence 87632 111223456788999999999999999999999999998887 54
No 79
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=97.59 E-value=0.00077 Score=52.07 Aligned_cols=134 Identities=13% Similarity=0.103 Sum_probs=83.6
Q ss_pred CCCCHHHHHHHHHccCCC--CCcHH----HHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecC---ccccccc
Q 025384 18 RPSDLMILQQLHADAFPI--RYESE----FFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQAN---ESEIGDL 88 (253)
Q Consensus 18 ~~~D~~~l~~l~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~---~~~~~~~ 88 (253)
..++++++.+++.+.|.. .|.-. .-.....+.+....++.+ +|+++|++-+.+.... ...+...
T Consensus 6 ~~~~l~~~~rlR~~vFv~rlgW~v~~~dg~E~DqyD~~~~~ylv~~~-------~g~v~g~~RLlptt~p~ML~~~F~~l 78 (182)
T PF00765_consen 6 SRRLLEEMFRLRHRVFVDRLGWDVPCEDGMEIDQYDDPDAVYLVALD-------DGRVVGCARLLPTTGPYMLSDVFPHL 78 (182)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCCCHHCCTSEE--TTGCTT-EEEEEEE-------TTEEEEEEEEEETTS--HHHHCTGGG
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCcCCCCcEeeecCCCCCeEEEEEE-------CCEEEEEeeeccCCCcchhhhHHHHH
Confidence 456678888888888865 46521 111112223344445555 7999999887764322 1122223
Q ss_pred ccccCCCCCCcEEEEEEEEEccCccc------cCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEE
Q 025384 89 LSYDSAKSDQTLVYILTLGVVDTYRN------LGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVR 162 (253)
Q Consensus 89 ~~~~~~~~~~~~~~i~~l~V~~~~rg------~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~ 162 (253)
+.-.+.......+.+.+++|+++..+ .-+...|+..+.++|... |++.+...+. .+..++++++||....
T Consensus 79 l~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~-gi~~~v~V~~---~~~~r~l~r~G~~~~~ 154 (182)
T PF00765_consen 79 LPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSN-GIRHIVGVVD---PAMERILRRAGWPVRR 154 (182)
T ss_dssp HTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCT-T-SEEEEEEE---HHHHHHHHHCT-EEEE
T ss_pred hCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHC-CCCEEEEEEC---hHHHHHHHHcCCceEE
Confidence 32223333467899999999998543 246789999999999999 9999888776 4679999999998744
No 80
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.55 E-value=0.0019 Score=47.29 Aligned_cols=105 Identities=17% Similarity=0.271 Sum_probs=74.9
Q ss_pred ceEEEe-CCCCCHHHHHHHHHccCC-------CCCcHHHHHHhhcc----cceeeeeeeecCCCCCCCCceEEEEEEEEe
Q 025384 11 TICYRP-IRPSDLMILQQLHADAFP-------IRYESEFFQNVVNA----RDIVSWGAVDRSRPNGHSDELIGFVTARIV 78 (253)
Q Consensus 11 ~i~ir~-~~~~D~~~l~~l~~~~~~-------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~ 78 (253)
.+.++. ..++|++.+.+++.+.+. .....+++..+... .....+.+.. +|++||+.....
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-------~g~~va~~~~~~- 90 (142)
T PF13480_consen 19 GVRFEVATDPADLEAFYELYRESWARRHGGFAPPFSRDFFRDLLRSLAESGRLRLFVLYD-------GGEPVAFALGFR- 90 (142)
T ss_pred CEEEEEeCCHHHHHHHHHHHHHHHhhhhCCCCCcchHHHHHHHHHhhccCCCEEEEEEEE-------CCEEEEEEEEEE-
Confidence 355655 356778888877654322 23345666666553 2344445554 899999987764
Q ss_pred ecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEE
Q 025384 79 QANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHV 142 (253)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v 142 (253)
.+...+....+++|+++..+.|..|+..++++|.+. |++.+-+..
T Consensus 91 ------------------~~~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~-g~~~~d~g~ 135 (142)
T PF13480_consen 91 ------------------HGGTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIER-GLRYFDFGG 135 (142)
T ss_pred ------------------ECCEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHC-CCCEEEECC
Confidence 345677788889999999999999999999999999 888766544
No 81
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=97.32 E-value=0.0024 Score=52.60 Aligned_cols=67 Identities=16% Similarity=0.307 Sum_probs=58.2
Q ss_pred cCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcceEEeCCeeeeeEEEEEEecCCCC
Q 025384 115 LGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYINGGRS 189 (253)
Q Consensus 115 ~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~~~~~g~~~d~~~~~~~l~~~~~ 189 (253)
.|-...++..+.+.|.+. |+.+|.+.|...+ ..+|+++||..++..+.|+. | .|.+.|.++++..+.
T Consensus 20 ~~~~~~~~~~~~~~a~~~-~~~ki~~~~~~~~---~~~~~~~g~~~e~~i~~~f~--g--~~~~~~~~~~~~~r~ 86 (266)
T TIGR03827 20 GNDVEALIPDLDALAKKE-GYTKIIAKVPGSD---KPLFEERGYLEEAKIPGYFN--G--HDAYFMSKYLDEDRR 86 (266)
T ss_pred CccHHHHHHHHHHHHHHc-CCcEEEEEccHHH---HHHHHHCCCeEEEecccccC--C--CceEEEEEcCchHhC
Confidence 345789999999999999 9999999998775 78999999999999998884 6 589999999987543
No 82
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=97.31 E-value=0.0042 Score=49.05 Aligned_cols=135 Identities=10% Similarity=0.064 Sum_probs=83.7
Q ss_pred CCCCCHHHHHHHHHccCCC--CCcHHH---H-HHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCc---ccccc
Q 025384 17 IRPSDLMILQQLHADAFPI--RYESEF---F-QNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANE---SEIGD 87 (253)
Q Consensus 17 ~~~~D~~~l~~l~~~~~~~--~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~---~~~~~ 87 (253)
..+++++++.++..+.|.. .|+... + .........++++... ++|+++|++-+.+..... ..+..
T Consensus 13 ~~~~~l~~~~rLR~~VF~~elgW~~~~~~g~E~D~yD~~~~~yll~~~------~~g~vvG~~RLlptt~p~ml~~~fp~ 86 (207)
T PRK13834 13 REASLLKQMHRLRARVFGGRLGWDVSITDGEERDQFDDLKPTYILAIS------DSGRVAGCARLLPAIGPTMLAQVFPQ 86 (207)
T ss_pred cCHHHHHHHHHHHHHHhccccCCCCCCCCCcCccCCCCCCCEEEEEEe------CCCeEEEEEecccCCCcchhhhhcHH
Confidence 4456677888888887765 343111 1 0111122333334333 478999998776533221 11111
Q ss_pred cccccCCCCCCcEEEEEEEEEccCcccc---C----HHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEE
Q 025384 88 LLSYDSAKSDQTLVYILTLGVVDTYRNL---G----IASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKC 160 (253)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~l~V~~~~rg~---G----iGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~ 160 (253)
.+...........+.+.+++|++++++. + +...|+..+.+++... |++.++..+.. ...+.++++||..
T Consensus 87 l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~-Gi~~~~~v~~~---~~~r~l~r~G~~~ 162 (207)
T PRK13834 87 LLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMAN-GYTEIVTATDL---RFERILARAGWPM 162 (207)
T ss_pred hcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHC-CCCEEEEEECH---HHHHHHHHcCCCe
Confidence 2211223335678999999999985322 2 5678999999999999 99988776664 5678999999876
Q ss_pred E
Q 025384 161 V 161 (253)
Q Consensus 161 ~ 161 (253)
.
T Consensus 163 ~ 163 (207)
T PRK13834 163 Q 163 (207)
T ss_pred E
Confidence 3
No 83
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.27 E-value=0.0016 Score=56.60 Aligned_cols=132 Identities=14% Similarity=0.171 Sum_probs=97.5
Q ss_pred CCceEEEeCCCCCHHHHHHHHHccCC-----CCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcc
Q 025384 9 HPTICYRPIRPSDLMILQQLHADAFP-----IRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANES 83 (253)
Q Consensus 9 ~~~i~ir~~~~~D~~~l~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~ 83 (253)
.+.+++++....+++.+.++.+..-. .+|.++...+...++....|.......- .|+-+||++.+..
T Consensus 411 em~l~vs~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKf--gDnGiigvviv~k------ 482 (574)
T COG3882 411 EMRLTVSKFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKF--GDNGIIGVVIVEK------ 482 (574)
T ss_pred eEEEEEeeccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEecccc--ccCceEEEEEEEe------
Confidence 35688899999999999999876432 2566778888776666666654331111 2566899988764
Q ss_pred cccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEE--ecCHHHHHHHHhCCCEEE
Q 025384 84 EIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVI--SYNIPAIHLYKKMSFKCV 161 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~--~~N~~a~~fy~k~GF~~~ 161 (253)
....+.|..+...=..-|+++-++|+..+.+.|... |+..+...-. ..|.+.-.||+++||+..
T Consensus 483 -------------k~~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~-gi~tir~~Y~pt~kN~pv~~FyE~mgf~l~ 548 (574)
T COG3882 483 -------------KESEWFIDTFLMSCRVLGRKVEQRLMNSLEEQALSE-GINTIRGYYIPTEKNAPVSDFYERMGFKLK 548 (574)
T ss_pred -------------cCCeEEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcceeeeEecccccCCcHHHHHHHhccccc
Confidence 224445666665656668899999999999999998 9999988754 469999999999999955
Q ss_pred E
Q 025384 162 R 162 (253)
Q Consensus 162 ~ 162 (253)
+
T Consensus 549 ~ 549 (574)
T COG3882 549 G 549 (574)
T ss_pred c
Confidence 5
No 84
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=97.25 E-value=0.00051 Score=43.79 Aligned_cols=30 Identities=23% Similarity=0.213 Sum_probs=26.2
Q ss_pred EEEEEEEEEccCccccCHHHHHHHHHHHHH
Q 025384 100 LVYILTLGVVDTYRNLGIASSLISEVIKYA 129 (253)
Q Consensus 100 ~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a 129 (253)
...|..|+|+|.+|++|||+.||+.+.+..
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 356889999999999999999999998753
No 85
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.87 E-value=0.032 Score=43.39 Aligned_cols=140 Identities=16% Similarity=0.144 Sum_probs=87.9
Q ss_pred EEeCCCCCHHHHHHHHHccCCC--CCc----HHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecC---ccc
Q 025384 14 YRPIRPSDLMILQQLHADAFPI--RYE----SEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQAN---ESE 84 (253)
Q Consensus 14 ir~~~~~D~~~l~~l~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~---~~~ 84 (253)
.+...++-++++.++..+.|.. .|+ ..+-.....+.+..+..+.. .+++|+|++-+.+.-.. ...
T Consensus 9 ~~~~~~~~l~em~rlR~~vF~erL~W~v~~~~g~E~DqyD~~~t~Yll~~~------~~g~I~G~~RlLptt~P~mL~~v 82 (209)
T COG3916 9 RRELFPKALEEMHRLRYQVFKERLGWDVVCIDGFEIDQYDNLDTVYLLALT------SDGRIVGCVRLLPTTGPYMLTDV 82 (209)
T ss_pred cchhcHHHHHHHHHHHHHHHHHhcCCceeccCCccccccCCCCceEEEEEc------CCCcEEEEEEeccCCCcchhhhh
Confidence 3445666788888888888764 344 22222222233334444433 48999999977653211 111
Q ss_pred ccccccccCCCCCCcEEEEEEEEEcc--Ccccc---C-HHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCC
Q 025384 85 IGDLLSYDSAKSDQTLVYILTLGVVD--TYRNL---G-IASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSF 158 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~i~~l~V~~--~~rg~---G-iGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF 158 (253)
+..++.-.........+...+++|+. .-+.. . ++..|+..+++++... |++.|...+. ....+..+++||
T Consensus 83 F~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~-G~~~IvtVt~---~~meril~r~Gw 158 (209)
T COG3916 83 FPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALAR-GITGIVTVTD---TGMERILRRAGW 158 (209)
T ss_pred hHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHc-CCceEEEEEc---hHHHHHHHHcCC
Confidence 22223323334445778888898886 33333 3 3668889999999999 9999887776 357889999999
Q ss_pred EEEEE
Q 025384 159 KCVRR 163 (253)
Q Consensus 159 ~~~~~ 163 (253)
.....
T Consensus 159 ~~~ri 163 (209)
T COG3916 159 PLTRI 163 (209)
T ss_pred CeEEc
Confidence 76543
No 86
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=96.83 E-value=0.057 Score=41.45 Aligned_cols=124 Identities=13% Similarity=0.080 Sum_probs=70.8
Q ss_pred CCCCHHHHHHHHHccCCCCCcHHHHHHhhccc-c-eeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccccCCC
Q 025384 18 RPSDLMILQQLHADAFPIRYESEFFQNVVNAR-D-IVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDSAK 95 (253)
Q Consensus 18 ~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~ 95 (253)
..+-++++..+...- ...+..+.+..+.+.- + ...+.... +..+++|+.+.+....... ..
T Consensus 11 ~~e~~d~fmk~~g~~-r~~Fk~~Di~~wk~sf~~~Y~l~~~~~-----KgT~~via~~~~~~~~~l~-----------~~ 73 (181)
T PF06852_consen 11 PQEYFDQFMKLHGNE-RWNFKRNDIKLWKESFDDDYWLVLTCL-----KGTDRVIATVHLIRFDPLN-----------PS 73 (181)
T ss_pred CHHHHHHHHHHhcCC-cccccHHHHHHHHHhhccCeEEEEEEE-----cCCCcEEEEEEEEEeccCC-----------CC
Confidence 344567777777552 2222233343333322 2 33333333 1367788888776432111 11
Q ss_pred CCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHh-CCCEEEEE
Q 025384 96 SDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK-MSFKCVRR 163 (253)
Q Consensus 96 ~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k-~GF~~~~~ 163 (253)
++....++...+++|+|||+|+++.+-..+.+..... +-. ..+ ..|..+.++|.+ +||...+.
T Consensus 74 ~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~-~~N-~~~---~~~~~~~~~w~k~~G~~~~~h 137 (181)
T PF06852_consen 74 PDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSV-DDN-SVA---QGNVKMSNFWHKMFGFDDYGH 137 (181)
T ss_pred CCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccC-CCc-eee---ecCHHHHHHHHHHhCCCCCcc
Confidence 2356788889999999999999964444444544443 332 222 355677888877 69887665
No 87
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=96.75 E-value=0.026 Score=45.74 Aligned_cols=139 Identities=14% Similarity=0.132 Sum_probs=83.9
Q ss_pred eEEEeCCC-CCHHHHHHHHHccCCC--CCcH-----HHHH-HhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCc
Q 025384 12 ICYRPIRP-SDLMILQQLHADAFPI--RYES-----EFFQ-NVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANE 82 (253)
Q Consensus 12 i~ir~~~~-~D~~~l~~l~~~~~~~--~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~ 82 (253)
+.++.+.. ++++++.+++.+.|.. .|+. +-.+ .... .....+++.+ .++|++||++-+.......
T Consensus 8 ~~v~~a~~~~~~~~~~~lR~~VFv~e~gw~~~~~~~~~~E~D~~D-~~~~h~l~~~-----~~~g~vvG~~RLl~t~~~~ 81 (241)
T TIGR03694 8 FEIIPAVTPELLEEAFRLRYQVYCEELGFEPPSDYPDGLETDEYD-AHSVHSLLRH-----RRTGTFVGCVRLVLPNSSD 81 (241)
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCC-CCCcEEEEEE-----CCCCCEEEEEEEecccccc
Confidence 45555444 4578888888887753 3431 1011 1111 2223333332 1258999999887632111
Q ss_pred c-c------cc-ccc---ccc-CCCCCCcEEEEEEEEEccCcccc--------C--------------------HHHHHH
Q 025384 83 S-E------IG-DLL---SYD-SAKSDQTLVYILTLGVVDTYRNL--------G--------------------IASSLI 122 (253)
Q Consensus 83 ~-~------~~-~~~---~~~-~~~~~~~~~~i~~l~V~~~~rg~--------G--------------------iGs~Ll 122 (253)
. . .. +.+ .+. ........+.+.+++|++++|++ | +...|+
T Consensus 82 p~~~~p~e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 161 (241)
T TIGR03694 82 PDQPFPFEKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLY 161 (241)
T ss_pred ccccccHHHHhccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHH
Confidence 0 0 00 000 000 11134678999999999999974 2 557789
Q ss_pred HHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEE
Q 025384 123 SEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKC 160 (253)
Q Consensus 123 ~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~ 160 (253)
..+.+++... |++.++..+.. ...++++++|+..
T Consensus 162 ~~~~~~a~~~-Gi~~~~~v~~~---~l~r~l~r~G~~~ 195 (241)
T TIGR03694 162 LGLIALSSAN-GITHWYAIMEP---RLARLLSRFGIQF 195 (241)
T ss_pred HHHHHHHHHC-CCcEEEEEeCH---HHHHHHHHhCCce
Confidence 9999999999 99988877764 5678899999876
No 88
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=96.46 E-value=0.04 Score=46.54 Aligned_cols=142 Identities=15% Similarity=0.103 Sum_probs=67.0
Q ss_pred eEEEeCCCCCHHHHHHHHHccCCC----CCcH-----------HHHHHhh-c--ccceeeeeeeecCCCCCCCCceEEEE
Q 025384 12 ICYRPIRPSDLMILQQLHADAFPI----RYES-----------EFFQNVV-N--ARDIVSWGAVDRSRPNGHSDELIGFV 73 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~~~~----~~~~-----------~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~ivG~~ 73 (253)
+.|||++.+|+++|.++....=+. +-.. ..|.... . ....+.|+..+ ...|++||++
T Consensus 2 ~viRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED-----~~tg~vvGts 76 (342)
T PF04958_consen 2 LVIRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLED-----TETGEVVGTS 76 (342)
T ss_dssp EEEEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEE-----TTT--EEEEE
T ss_pred eEEecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEe-----cCCCcEEEEE
Confidence 679999999999999998764221 1112 2232212 1 12334555544 2479999999
Q ss_pred EEEEeecCccccc-----cccccc-------------CCCCCCcEEEEEEEEEccCccccCHHHHHHHHH---HHHHhcC
Q 025384 74 TARIVQANESEIG-----DLLSYD-------------SAKSDQTLVYILTLGVVDTYRNLGIASSLISEV---IKYASNI 132 (253)
Q Consensus 74 ~~~~~~~~~~~~~-----~~~~~~-------------~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~---~~~a~~~ 132 (253)
.+.-.-..+.-+. ...+.+ ....-..+..+.++.++|+||+.|.|+.|-+.- +....+.
T Consensus 77 ~I~a~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~~~~r 156 (342)
T PF04958_consen 77 AIEAAVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFIAQHRER 156 (342)
T ss_dssp EEESSTTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH-GGG
T ss_pred eEEeccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHHHhChhh
Confidence 7764211111100 000000 011123467789999999999999999886553 2333333
Q ss_pred CCccEEEEEEEe--cCHHHHHHHHhCCCE
Q 025384 133 PTCRALYLHVIS--YNIPAIHLYKKMSFK 159 (253)
Q Consensus 133 ~g~~~i~l~v~~--~N~~a~~fy~k~GF~ 159 (253)
++ .++..+... +-..--.||+..|=+
T Consensus 157 F~-~~viAElrG~~De~G~SPFWdalG~~ 184 (342)
T PF04958_consen 157 FA-DRVIAELRGVSDEDGRSPFWDALGRH 184 (342)
T ss_dssp S--SEEEEE--B---TT---HHHHHTGGG
T ss_pred cc-hheeeeccCCcCCCCCCchHHHhhcc
Confidence 22 344444321 111334566666543
No 89
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=96.46 E-value=0.049 Score=46.28 Aligned_cols=126 Identities=11% Similarity=0.060 Sum_probs=86.3
Q ss_pred ceEEEeCCCCCHHHHHHHHHccCCC----CCcHHHHHHhhcc--cceeeeeeeecCCCCCCCCceEEEEEEEEeecCccc
Q 025384 11 TICYRPIRPSDLMILQQLHADAFPI----RYESEFFQNVVNA--RDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESE 84 (253)
Q Consensus 11 ~i~ir~~~~~D~~~l~~l~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~ 84 (253)
.++++. .+|++.+.+++...+.. ..+.++|...... .....+.+.. .+|++||.+.+...
T Consensus 151 Gv~v~~--~~~l~~F~~l~~~t~~r~g~p~~~~~~f~~l~~~~~~~~~l~~a~~------~~g~~va~~l~~~~------ 216 (330)
T TIGR03019 151 GLTVTV--DGDLDRFYDVYAENMRDLGTPVFSRRYFRLLKDVFGEDCEVLTVRL------GDGVVASAVLSFYF------ 216 (330)
T ss_pred CeEEEE--CCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHhcccCEEEEEEEe------CCCCEEEEEEEEEe------
Confidence 355654 46688888887754321 3457777776543 2233344441 27888888665431
Q ss_pred ccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 85 IGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
+..++....+.++++++.+-+..|+-+++++|.++ |++..-+.....|....+|=++.||+++...
T Consensus 217 -------------~~~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~-G~~~fDfG~s~~~~G~~~FK~~~G~~~~~l~ 282 (330)
T TIGR03019 217 -------------RDEVLPYYAGGLREARDVAANDLMYWELMRRACER-GLRVFDFGRSKRGTGPFKFKKNWGFEPQPLH 282 (330)
T ss_pred -------------CCEEEEEeccChHHHHhhChHHHHHHHHHHHHHHC-CCcEEEcCCCCCCCccHHHHhcCCCeeccce
Confidence 22233335567899999999999999999999999 9999988776666677788888999976544
No 90
>PRK10456 arginine succinyltransferase; Provisional
Probab=96.43 E-value=0.025 Score=47.64 Aligned_cols=108 Identities=17% Similarity=0.155 Sum_probs=62.4
Q ss_pred eEEEeCCCCCHHHHHHHHHccC------CCCCc---------HHHHHHhhc-ccceeeeeeeecCCCCCCCCceEEEEEE
Q 025384 12 ICYRPIRPSDLMILQQLHADAF------PIRYE---------SEFFQNVVN-ARDIVSWGAVDRSRPNGHSDELIGFVTA 75 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~~------~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ivG~~~~ 75 (253)
+.|||++.+|+++|.++....= |.+.. ...|..... ....+.|+..+ .+.|++||++.+
T Consensus 2 ~vvRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED-----~~tg~vvGts~I 76 (344)
T PRK10456 2 MVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLED-----SETGTVAGICAI 76 (344)
T ss_pred eEEecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEe-----CCCCcEEEEEeE
Confidence 6799999999999999987642 22211 122221111 22334444433 247999999977
Q ss_pred EEeecCccccc-----cccccc-------------CCCCCCcEEEEEEEEEccCccccCHHHHHHHH
Q 025384 76 RIVQANESEIG-----DLLSYD-------------SAKSDQTLVYILTLGVVDTYRNLGIASSLISE 124 (253)
Q Consensus 76 ~~~~~~~~~~~-----~~~~~~-------------~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~ 124 (253)
.-.-..+.-+. ...+.. ....-..+..+.++.++|+||+.|.|+.|-+.
T Consensus 77 ~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~ 143 (344)
T PRK10456 77 EVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKS 143 (344)
T ss_pred EecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHH
Confidence 64322221110 000000 01112335678999999999999999887554
No 91
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=96.24 E-value=0.095 Score=37.04 Aligned_cols=52 Identities=13% Similarity=0.179 Sum_probs=39.4
Q ss_pred EEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhC
Q 025384 101 VYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKM 156 (253)
Q Consensus 101 ~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~ 156 (253)
..|..++|+++.|++|+|++|.+.+++.= +.+.-.+.+........+|.+|.
T Consensus 47 ~cvLDFyVhes~QR~G~Gk~LF~~ML~~e----~~~p~~~a~DrPS~Kll~Fl~Kh 98 (120)
T PF05301_consen 47 LCVLDFYVHESRQRRGYGKRLFDHMLQEE----NVSPHQLAIDRPSPKLLSFLKKH 98 (120)
T ss_pred ceeeeEEEEeceeccCchHHHHHHHHHHc----CCCcccceecCCcHHHHHHHHHh
Confidence 36889999999999999999999988743 33444555666666777777663
No 92
>PHA00432 internal virion protein A
Probab=96.04 E-value=0.043 Score=39.84 Aligned_cols=41 Identities=20% Similarity=0.097 Sum_probs=30.5
Q ss_pred HHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 121 LISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 121 Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
++....+...+. ...+.=.|.+.|..+++|.+.+||+....
T Consensus 81 ~~~~~ld~ml~~--yp~LwNyV~~~N~~hir~Lk~lGf~f~~e 121 (137)
T PHA00432 81 LIMEYRDMMLDQ--YPSLWNYVWVGNKSHIRFLKSIGAVFHNE 121 (137)
T ss_pred HHHHHHHHHHHh--hhhhheeeecCCHHHHHHHHHcCeeeecc
Confidence 333334443443 56788889999999999999999998665
No 93
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=95.71 E-value=0.068 Score=44.93 Aligned_cols=106 Identities=19% Similarity=0.183 Sum_probs=61.3
Q ss_pred EEeCCCCCHHHHHHHHHcc------CCCCC---------cHHHHHH-hhcccceeeeeeeecCCCCCCCCceEEEEEEEE
Q 025384 14 YRPIRPSDLMILQQLHADA------FPIRY---------ESEFFQN-VVNARDIVSWGAVDRSRPNGHSDELIGFVTARI 77 (253)
Q Consensus 14 ir~~~~~D~~~l~~l~~~~------~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~ 77 (253)
|||++.+|+++|.++..+. .|.+. +...|.. .......+.|+..+ .+.|++||++.+..
T Consensus 2 vRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED-----~~tg~vvGts~I~a 76 (335)
T TIGR03243 2 VRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLED-----TETGTVAGVSAIEA 76 (335)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEe-----CCCCeEEEEEeEEe
Confidence 7999999999999997764 22221 1223311 11123334444443 24799999997764
Q ss_pred eecCccccc-----cccccc-------------CCCCCCcEEEEEEEEEccCccccCHHHHHHHH
Q 025384 78 VQANESEIG-----DLLSYD-------------SAKSDQTLVYILTLGVVDTYRNLGIASSLISE 124 (253)
Q Consensus 78 ~~~~~~~~~-----~~~~~~-------------~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~ 124 (253)
.-..+.-+. ...+.. ....-..+..+.++.++|+||+.|.|+.|-+.
T Consensus 77 ~vG~~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~ 141 (335)
T TIGR03243 77 AVGLDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRS 141 (335)
T ss_pred cccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHH
Confidence 322221110 000000 01112335678999999999999999987654
No 94
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=95.66 E-value=0.092 Score=44.19 Aligned_cols=106 Identities=16% Similarity=0.157 Sum_probs=61.3
Q ss_pred EEeCCCCCHHHHHHHHHcc------CCCCC---------cHHHHHHhhc--ccceeeeeeeecCCCCCCCCceEEEEEEE
Q 025384 14 YRPIRPSDLMILQQLHADA------FPIRY---------ESEFFQNVVN--ARDIVSWGAVDRSRPNGHSDELIGFVTAR 76 (253)
Q Consensus 14 ir~~~~~D~~~l~~l~~~~------~~~~~---------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ivG~~~~~ 76 (253)
|||++.+|+++|.++..+. .|.+. +...|..... ....+.|+..+ .+.|++||++.+.
T Consensus 2 iRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLED-----t~tg~vvGts~I~ 76 (336)
T TIGR03245 2 VRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLED-----TETGKLLGTSSIV 76 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEe-----CCCCcEEEEEeEE
Confidence 7999999999999998764 22221 1223322111 22334444443 2479999999776
Q ss_pred EeecCccccc-----cccccc-------------CCCCCCcEEEEEEEEEccCccccCHHHHHHHH
Q 025384 77 IVQANESEIG-----DLLSYD-------------SAKSDQTLVYILTLGVVDTYRNLGIASSLISE 124 (253)
Q Consensus 77 ~~~~~~~~~~-----~~~~~~-------------~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~ 124 (253)
..-..+.-+. ...+.. ....-..+..+.++.++|+||+.|.|+.|-+.
T Consensus 77 a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~ 142 (336)
T TIGR03245 77 ASAGYGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRA 142 (336)
T ss_pred ecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHH
Confidence 4322221110 000000 01112335678999999999999999887554
No 95
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=95.60 E-value=0.071 Score=44.89 Aligned_cols=106 Identities=19% Similarity=0.155 Sum_probs=60.5
Q ss_pred EEeCCCCCHHHHHHHHHccC------CCCCc---------HHHHHHhhc-ccceeeeeeeecCCCCCCCCceEEEEEEEE
Q 025384 14 YRPIRPSDLMILQQLHADAF------PIRYE---------SEFFQNVVN-ARDIVSWGAVDRSRPNGHSDELIGFVTARI 77 (253)
Q Consensus 14 ir~~~~~D~~~l~~l~~~~~------~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~ 77 (253)
|||++.+|+++|.++....= |.+.. ...|..... ....+.|+..+ .+.|++||++.+..
T Consensus 2 vRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED-----t~tg~vvGts~I~a 76 (336)
T TIGR03244 2 VRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLED-----TETGTVAGVSAIEA 76 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEe-----CCCCeEEEEEeEEe
Confidence 79999999999999987642 22211 122211111 22334444433 24799999997764
Q ss_pred eecCccccc-----cccccc-------------CCCCCCcEEEEEEEEEccCccccCHHHHHHHH
Q 025384 78 VQANESEIG-----DLLSYD-------------SAKSDQTLVYILTLGVVDTYRNLGIASSLISE 124 (253)
Q Consensus 78 ~~~~~~~~~-----~~~~~~-------------~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~ 124 (253)
.-..+.-+. ...+.. ....-..+..+.++.++|+||+.|.|+.|-+.
T Consensus 77 ~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~ 141 (336)
T TIGR03244 77 AVGLEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKS 141 (336)
T ss_pred cccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHH
Confidence 322221110 000000 01112335678999999999999999887554
No 96
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=95.33 E-value=0.024 Score=49.22 Aligned_cols=51 Identities=16% Similarity=0.264 Sum_probs=42.3
Q ss_pred ccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 109 VDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 109 ~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
...||.+|+|+.|++.+++.|++. +..+|.+... ..++..|+|+||+..|.
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee-~~~ki~viSg---iG~ReYy~k~GY~~~gp 509 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREE-GAKKILVISG---IGVREYYRKLGYELDGP 509 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhh-ccccEEEEec---ccHHHHHHHhCccccCC
Confidence 567999999999999999999999 6777654432 36889999999998763
No 97
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=94.92 E-value=0.33 Score=40.86 Aligned_cols=105 Identities=21% Similarity=0.253 Sum_probs=69.4
Q ss_pred eEEEeCCCCCHHHHHHH---HHcc--------CCCCCcHHHHHHhhcccce---eeeeeeecCCCCCCCCceEEEEEEEE
Q 025384 12 ICYRPIRPSDLMILQQL---HADA--------FPIRYESEFFQNVVNARDI---VSWGAVDRSRPNGHSDELIGFVTARI 77 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l---~~~~--------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ivG~~~~~~ 77 (253)
+....+.-+|..++.++ .++. |...|+.+|+...+..++. +...... ....++|||+++.+
T Consensus 81 f~W~tldv~~~~~l~el~~lL~enyVEd~~~m~rf~Ys~eFl~Wal~~pg~~~~WHiGVRv-----~~s~kLVaFIsaiP 155 (421)
T KOG2779|consen 81 FRWETLDVSDFKDLEELYNLLNENYVEDDDSMFRFDYSPEFLKWALQPPGWKKEWHIGVRV-----KSSKKLVAFISAIP 155 (421)
T ss_pred ceeeccCCccHhHHHHHHhhcccCCCCccccchhhhccHHHHHhhhcCCCCccceEEEEEE-----ecCCceEEEEeccc
Confidence 44445555555555544 4443 4457888999888876543 1222211 13679999998875
Q ss_pred eecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcC
Q 025384 78 VQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNI 132 (253)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~ 132 (253)
.. +.........+.|-.++||...|+++++=.|++++-..+.-.
T Consensus 156 ~~-----------irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~ 199 (421)
T KOG2779|consen 156 AT-----------IRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLE 199 (421)
T ss_pred cE-----------EEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhh
Confidence 21 122233446788999999999999999999999998776655
No 98
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.87 E-value=0.23 Score=34.18 Aligned_cols=60 Identities=12% Similarity=0.113 Sum_probs=45.4
Q ss_pred CCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEec
Q 025384 66 SDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISY 145 (253)
Q Consensus 66 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~ 145 (253)
++...|++.+.... +.....|+..++|.++.||+|+|..+.+.+.+. ...+...+.++
T Consensus 16 ~e~y~~~aIvt~~~----------------~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d------~~~L~Wrsr~~ 73 (99)
T cd04264 16 SEGYNAAAIVTYEG----------------VNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRD------FPKLFWRSRKT 73 (99)
T ss_pred eCCceEEEEEeccC----------------CCCCceEEEEEEEchhhhhcChHHHHHHHHHhh------CCceEEEeCCC
Confidence 56677887776311 124678999999999999999999999999873 34666677767
Q ss_pred CH
Q 025384 146 NI 147 (253)
Q Consensus 146 N~ 147 (253)
|+
T Consensus 74 n~ 75 (99)
T cd04264 74 NP 75 (99)
T ss_pred Cc
Confidence 64
No 99
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=94.22 E-value=0.73 Score=35.17 Aligned_cols=112 Identities=15% Similarity=0.204 Sum_probs=70.3
Q ss_pred CCCC-CHHHHHHHHHccCCCCCc-HHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccccCC
Q 025384 17 IRPS-DLMILQQLHADAFPIRYE-SEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDSA 94 (253)
Q Consensus 17 ~~~~-D~~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~ 94 (253)
+..- |.+.|.++..+.|...-. ..++.. ++......++ ++..-|.+.+.... .
T Consensus 28 ~~~~~d~~kL~~ll~~sf~~~~~v~~yl~~-l~~~~~~iy~----------d~~y~~~AIVt~e~--------------~ 82 (170)
T PF04768_consen 28 LSEFVDLDKLRALLERSFGGKLDVDHYLDR-LNNRLFKIYV----------DEDYEGAAIVTPEG--------------P 82 (170)
T ss_dssp CCCSS-HHHHHHHHHHHSTSSSBHTTHHHH-HHTS-SEEEE----------ETTSSEEEEEEEE---------------S
T ss_pred ccccCCHHHHHHHHHhcccccccHHHHHHH-hhccceEEEE----------eCCceEEEEEEecC--------------C
Confidence 4444 899999999999955444 444444 4443333332 34455666665421 1
Q ss_pred CCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHH-Hh-CCCEE
Q 025384 95 KSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLY-KK-MSFKC 160 (253)
Q Consensus 95 ~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy-~k-~GF~~ 160 (253)
...+...|+..++|.+..||.|++-.+-.++.+ ....+...+.++|+ .+++| ++ -|+-.
T Consensus 83 ~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~------d~p~L~Wrsr~~n~-~~~Wyf~rs~G~~~ 143 (170)
T PF04768_consen 83 DSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRK------DFPKLFWRSREDNP-NNKWYFERSDGSFK 143 (170)
T ss_dssp CTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHH------H-SSEEEEEETT-T-THHHHHHH-SEEEE
T ss_pred CCCCCCeEEEEEEecchhhhcCHHHHHHHHHHH------hccceEEEecCCCC-cccEEEEeeEEEEE
Confidence 234568899999999999999999999999876 33456677777774 55666 33 46543
No 100
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.09 E-value=0.25 Score=44.18 Aligned_cols=148 Identities=11% Similarity=0.096 Sum_probs=92.2
Q ss_pred CceEEEeCCCCCHHHHHHHHHccCC-------CCCcHHHH-----HHhhcccceeeeeeeecCCCCCCCCceEEEEEEEE
Q 025384 10 PTICYRPIRPSDLMILQQLHADAFP-------IRYESEFF-----QNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARI 77 (253)
Q Consensus 10 ~~i~ir~~~~~D~~~l~~l~~~~~~-------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~ 77 (253)
+-+.|||.+++|-+.+..+....+. .+-.+++. --.+.-....++++.+ .+++||||+++..
T Consensus 678 ~~y~iRPy~~~De~~v~~~ct~my~d~g~~lpf~n~pn~~~d~liggllsls~~lC~v~~d------e~~~i~gYa~a~~ 751 (891)
T KOG3698|consen 678 MFYDIRPYTIADEEYVSGMCTVMYTDNGELLPFRNAPNFADDNLIGGLLSLSEHLCEVVDD------EGHKIVGYASAHF 751 (891)
T ss_pred eeEeeccCccccHHHHHhhhhheeccCceeccCCCCCccccccchhheeccChhheeeeec------CCCceeEEeeeec
Confidence 4478999999999999999776542 11112222 2222223335555554 5788999998764
Q ss_pred eecCc-------------cccccccc----------------ccCCCCCCc-------------EEEEEEEEEccCcccc
Q 025384 78 VQANE-------------SEIGDLLS----------------YDSAKSDQT-------------LVYILTLGVVDTYRNL 115 (253)
Q Consensus 78 ~~~~~-------------~~~~~~~~----------------~~~~~~~~~-------------~~~i~~l~V~~~~rg~ 115 (253)
....- +...+.+. ...+..+.. .-...-.+++.+.-.-
T Consensus 752 Dvt~F~rn~~i~w~~~l~EKY~~~i~p~~~g~~~~~~~e~i~~S~h~~~~~~~~~~~P~~~~~nfPa~v~~~~~~~a~D~ 831 (891)
T KOG3698|consen 752 DVTLFSRNFLITWKEKLKEKYRGLIEPIGSGKLTDEYIEFIQNSQHPMDIEEWYPKIPDQIFENFPAWVETYFGMDASDA 831 (891)
T ss_pred ccchhhhceeeeeHHHHHHHhhccccccCCchhHHHHHHHHHHccCccchhhccccCcHHHHhcChHHHhhccccccccc
Confidence 21110 00011110 000110100 0011122344455577
Q ss_pred CHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 116 GIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 116 GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
|+.+++++-++.-++.. |.+...+.|..+..+-.+||.++||..++..
T Consensus 832 ~~~k~m~~vll~tL~aN-GsrGaf~~V~~dD~~~~~fys~lG~~d~~~~ 879 (891)
T KOG3698|consen 832 HPMKKMIQVLLVTLAAN-GSRGAFLTVAIDDIERQKFYSELGLTDLGLS 879 (891)
T ss_pred hHHHHHHHHHHHHHHhc-CCcceeEEechhHHHHHHHHHHhchHHHhHh
Confidence 99999999999999999 9999999999999999999999999887654
No 101
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=94.08 E-value=1.6 Score=31.45 Aligned_cols=103 Identities=13% Similarity=0.123 Sum_probs=70.7
Q ss_pred cceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHH
Q 025384 49 RDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKY 128 (253)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~ 128 (253)
++...+.... +..++|++.+..+. ......+.+ -+|++|| ++...-....+|
T Consensus 36 ~~~~Y~gVye-------g~~l~Gi~~v~~i~------------------~~~vecHa~-y~P~fRG--~a~~~~~~F~kw 87 (151)
T PF11039_consen 36 PDQLYLGVYE-------GGQLGGIVYVEEIQ------------------PSVVECHAM-YDPGFRG--YALEIGRLFCKW 87 (151)
T ss_pred CccEEEEEEe-------ceEEEEEEEEEEEe------------------eeeEEEEee-eccccch--hHHHHHHHHHHH
Confidence 3445555554 88999998887432 112233333 3999998 788777778888
Q ss_pred HhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcceEEeCCeeeeeEEEEE
Q 025384 129 ASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVY 182 (253)
Q Consensus 129 a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~~~~~g~~~d~~~~~~ 182 (253)
+-+...+..+...+...-+-.+-..+=+|.+.+|...+++. +. .+..+|..
T Consensus 88 lL~Ns~f~~vit~vp~kt~~Grvic~llg~~RVG~id~~~~-g~--~~vTlYq~ 138 (151)
T PF11039_consen 88 LLENSPFQNVITFVPDKTRYGRVICRLLGARRVGHIDDYFK-GV--DGVTLYQL 138 (151)
T ss_pred HhcCCceeEEEEecccccccchhHhhhhCCceeeeHHHHhc-CC--CceEEEEc
Confidence 87776777776666666555666777889999999999885 22 26666543
No 102
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=93.49 E-value=0.51 Score=32.51 Aligned_cols=44 Identities=16% Similarity=0.190 Sum_probs=35.6
Q ss_pred CcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCH
Q 025384 98 QTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNI 147 (253)
Q Consensus 98 ~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~ 147 (253)
+...|+..++|.++.||+|+|..+.+.+.+. ...+...+.++|+
T Consensus 32 ~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d------~~~L~Wrsr~~n~ 75 (99)
T cd04265 32 DGVPYLDKFAVSSSAQGEGTGEALWRRLRRD------FPKLFWRSRSTNP 75 (99)
T ss_pred CCceEEEEEEEchhhhhcChHHHHHHHHHhh------CCceEEEeCCCCc
Confidence 3677999999999999999999999998873 3456666666664
No 103
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=93.36 E-value=1 Score=32.64 Aligned_cols=61 Identities=18% Similarity=0.190 Sum_probs=46.1
Q ss_pred CCCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEe
Q 025384 65 HSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVIS 144 (253)
Q Consensus 65 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~ 144 (253)
.+|++||++.+-..++. ...|..+ -+|++....+|+-.+-.-+++|++. |...+++.=..
T Consensus 46 ~~~kLiav~v~D~l~~g------------------lSaVY~f-yDPd~~~~SlG~~~iL~eI~~a~~~-~l~y~YLGY~I 105 (128)
T PF04377_consen 46 LDGKLIAVAVVDILPDG------------------LSAVYTF-YDPDYSKRSLGTYSILREIELAREL-GLPYYYLGYWI 105 (128)
T ss_pred eCCeEEEEEEeecccch------------------hhheeee-eCCCccccCcHHHHHHHHHHHHHHc-CCCEEeeCeEe
Confidence 38999999888653211 1113333 3999999999999999999999998 99999986544
Q ss_pred c
Q 025384 145 Y 145 (253)
Q Consensus 145 ~ 145 (253)
.
T Consensus 106 ~ 106 (128)
T PF04377_consen 106 H 106 (128)
T ss_pred C
Confidence 3
No 104
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=93.26 E-value=0.13 Score=43.17 Aligned_cols=50 Identities=12% Similarity=0.221 Sum_probs=40.3
Q ss_pred CccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 111 TYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 111 ~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
.||.||+|+.|++.++..|++..|-.+|.+... ......|+|+||+..|.
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISG---VGtR~YY~klGY~LdGP 547 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISG---VGTRNYYRKLGYELDGP 547 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEec---cchHHHHHhhCeeecCh
Confidence 499999999999999999999877777654432 24577999999998663
No 105
>PRK14852 hypothetical protein; Provisional
Probab=93.19 E-value=0.16 Score=48.84 Aligned_cols=162 Identities=10% Similarity=0.083 Sum_probs=96.5
Q ss_pred CCceEEEeCC-CCCHHHHHHHHHccCCC-CCc----HH-HHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecC
Q 025384 9 HPTICYRPIR-PSDLMILQQLHADAFPI-RYE----SE-FFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQAN 81 (253)
Q Consensus 9 ~~~i~ir~~~-~~D~~~l~~l~~~~~~~-~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~ 81 (253)
.....||.+. ++|..++..|..+.+.. .|. .. .+...-.-+....|++.. .++++|..++......
T Consensus 26 ldr~~~r~Aet~~e~~~~~~L~~~~Y~~~Gy~~~~ps~~~~~~~~~lp~t~~~i~k~-------~~~~l~T~t~~~ds~~ 98 (989)
T PRK14852 26 LDRPAIKIAETPDEYTRAFRLVYEEYIRSGYLKPHPSRMYYNVWSILPATSVFIFKS-------YHDVLCTLTHIPDSGL 98 (989)
T ss_pred ccCcceeecCCHHHHHHHHHHHHHHHHHcCCCCcCcccccCCccccCCcceEEEecc-------CCcEEEEEEEecCCcc
Confidence 3455677754 46778888887665422 121 11 111111112233344433 4677777755543221
Q ss_pred cccccc-ccc--ccC-CCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHh-C
Q 025384 82 ESEIGD-LLS--YDS-AKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK-M 156 (253)
Q Consensus 82 ~~~~~~-~~~--~~~-~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k-~ 156 (253)
.+-..+ .+. ++. .......+.+..++++++.|..-+--.+++.+..++... +++.+.+.|.+.. ..||++ +
T Consensus 99 ~Gl~~D~lf~~eLd~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~-~~dd~~i~VnPkH---~~FY~r~l 174 (989)
T PRK14852 99 FGLPMDTLYKPEVDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMS-EVDDILVTVNPKH---VKFYTDIF 174 (989)
T ss_pred cCcCHHHHHHHHHHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHHc-CCCeEEEEECcch---HHHHHHHh
Confidence 111111 111 111 223446788999999988887776667778887887766 8888888777665 679996 7
Q ss_pred CCEEEEEEcceEEeCCeeeeeEEEEEEe
Q 025384 157 SFKCVRRLHGFYLINGQHYDSYLFVYYI 184 (253)
Q Consensus 157 GF~~~~~~~~~~~~~g~~~d~~~~~~~l 184 (253)
||+.++..+.|-..+. ..++|...+
T Consensus 175 ~f~~ig~~r~~p~Vna---PAvll~~dl 199 (989)
T PRK14852 175 LFKPFGEVRHYDTVDA---PAVALRIDL 199 (989)
T ss_pred CCccccccccCCCCCc---chhheecCH
Confidence 9999998776665543 677777666
No 106
>PHA01733 hypothetical protein
Probab=93.15 E-value=0.17 Score=37.44 Aligned_cols=45 Identities=20% Similarity=0.240 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 120 SLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 120 ~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
.++.+...+..+...+..+.=.|.+.|..+++|.+.+||+.....
T Consensus 89 ~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk~lGF~f~~~~ 133 (153)
T PHA01733 89 ALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLRKLGFKGLRYV 133 (153)
T ss_pred HHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHHHcCceeeccc
Confidence 344444333332325667777899999999999999999986644
No 107
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=92.79 E-value=3.7 Score=31.84 Aligned_cols=125 Identities=13% Similarity=0.171 Sum_probs=76.9
Q ss_pred EEeCCCCCHHHHHHHHHccCCC-----CCcHHHHHHhhcc--cceeeeeeeecCCCCCCCCceEEEEEEEEeecCccccc
Q 025384 14 YRPIRPSDLMILQQLHADAFPI-----RYESEFFQNVVNA--RDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIG 86 (253)
Q Consensus 14 ir~~~~~D~~~l~~l~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~ 86 (253)
+|+++++|++++.+++++-... ..+++.+..++-. .-...++..+ .+++|-.++++...+.. +.
T Consensus 31 lR~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~------~~~~ITDf~SFY~Lpst---vi 101 (190)
T PF02799_consen 31 LRPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVED------PDGKITDFFSFYSLPST---VI 101 (190)
T ss_dssp EEE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEE------TTSEEEEEEEEEEEEEE---ES
T ss_pred cccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEec------CCCceeeEEEEeeccee---ec
Confidence 8999999999999998764322 2345666665543 3345666655 35799999998864311 11
Q ss_pred ccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEE
Q 025384 87 DLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKC 160 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~ 160 (253)
+ .+....-..+|.... +....+ -.+|+..++-.|++. |+.-..+...-+|. .|.+.+.|.+
T Consensus 102 ~----~~k~~~l~aAY~fY~-~~~~~~----l~~Lm~DaLi~Ak~~-gfDVFNaLd~mdN~---~fL~~lKFg~ 162 (190)
T PF02799_consen 102 G----NPKHKTLKAAYSFYY-VATSTR----LKELMNDALILAKNE-GFDVFNALDLMDNS---SFLEDLKFGP 162 (190)
T ss_dssp S----SSSSSEEEEEEEEEE-EESSSH----HHHHHHHHHHHHHHT-TESEEEEESTTTGG---GTTTTTT-EE
T ss_pred C----CCCccceeeeeeeee-eecCCC----HHHHHHHHHHHHHHc-CCCEEehhhhccch---hhHhhCCccC
Confidence 0 011122344555433 333322 457788888888888 99988877777775 5899999987
No 108
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=92.40 E-value=3.3 Score=30.33 Aligned_cols=123 Identities=24% Similarity=0.267 Sum_probs=67.3
Q ss_pred eEEEeCCCCCHHHHHHHHHc----------cCCCC-----C--cHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEE
Q 025384 12 ICYRPIRPSDLMILQQLHAD----------AFPIR-----Y--ESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVT 74 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~----------~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~ 74 (253)
|.+|++.+.|++.+.++-.. .+|.. . +..-+.-. ....++|++.+ .++++.||+.
T Consensus 1 M~yR~f~e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~tSl~Alrfy--~RsgHSFvA~~------e~~~~~GfvL 72 (161)
T PF09390_consen 1 MRYRPFTEPDFAALQALDLAAQRRTDPAFDGLPEREREGRLSTSLAALRFY--ERSGHSFVAED------EGGELQGFVL 72 (161)
T ss_dssp -EEE---GGGHHHHHHC--------------------STTS---HHHHHHH--HCCS--EEEE-------ETTEEEEEEE
T ss_pred CcccccCcccHHHHHHHhhhccccccccccccccccccccccCCHHHhhhh--hccCCcEEEEc------cCCceeeeee
Confidence 47899999999999988322 12221 1 11111111 12346777773 3899999999
Q ss_pred EEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHH
Q 025384 75 ARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYK 154 (253)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~ 154 (253)
....... +...+.+..|.+.|. +......-||.++.+-|-.. |+-.+.+++.+ ....-.+
T Consensus 73 AQaVWQG---------------drptVlV~ri~~~~~-~~~~~~~GLLrAvvKSAYDa-~VYEv~l~l~p---~l~~A~~ 132 (161)
T PF09390_consen 73 AQAVWQG---------------DRPTVLVRRILLAPG-EPEEVYEGLLRAVVKSAYDA-GVYEVHLHLDP---ELEAAAR 132 (161)
T ss_dssp EEEEE-S---------------SSEEEEEEEE---EE-SSHHHHHHHHHHHHHHHHHT-T-SEEEE---T---HHHHHHH
T ss_pred hhHHhcC---------------CCceEEEEEeecCCC-CcHHHHHHHHHHHHHhhhcc-ceEEEEeeCCH---HHHHHHh
Confidence 8765432 345677777766554 44577788999999988888 88888888776 5566667
Q ss_pred hCCCEEEE
Q 025384 155 KMSFKCVR 162 (253)
Q Consensus 155 k~GF~~~~ 162 (253)
.-||...+
T Consensus 133 a~~~~~~~ 140 (161)
T PF09390_consen 133 AEGFRLGG 140 (161)
T ss_dssp HTT----S
T ss_pred hcccccCC
Confidence 78887644
No 109
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=92.36 E-value=0.051 Score=47.01 Aligned_cols=62 Identities=15% Similarity=0.175 Sum_probs=43.6
Q ss_pred EEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEE-----EEEecCHHHHHHHHhCCCEEEE
Q 025384 100 LVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYL-----HVISYNIPAIHLYKKMSFKCVR 162 (253)
Q Consensus 100 ~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l-----~v~~~N~~a~~fy~k~GF~~~~ 162 (253)
.+.|.++.|||+||+-|+|..-+..+.+|..+. -+....- .+......=..|+++.||+..-
T Consensus 241 aariarvvvhpdyr~dglg~~sv~~a~ewI~eR-riPEmr~rkHlvetiaqmarynpffe~~gfkylw 307 (593)
T COG2401 241 AARIARVVVHPDYRADGLGQLSVIAALEWIIER-RIPEMRPRKHLVETIAQMARYNPFFEKVGFKYLW 307 (593)
T ss_pred hhheeEEEeccccccCccchhHHHHHHHHHHHh-hChhhhhhhhHHHHHHHHHhcCchhhhhceeeee
Confidence 567999999999999999999999999998887 3332211 1111111224588999998643
No 110
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=92.19 E-value=0.39 Score=39.39 Aligned_cols=30 Identities=17% Similarity=0.197 Sum_probs=25.3
Q ss_pred EEEEEEccCccccCHHHHHHHHHHHHHhcC
Q 025384 103 ILTLGVVDTYRNLGIASSLISEVIKYASNI 132 (253)
Q Consensus 103 i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~ 132 (253)
+..|.|.|.||++|+|+-|++..-+.++..
T Consensus 158 LaCIltLPpyQrkGyG~~LI~fSYeLSr~E 187 (290)
T PLN03238 158 LACILTLPPYQRKGYGKFLISFAYELSKRE 187 (290)
T ss_pred EEEEEecChhhhccHhHhHHHHHhHHhhcc
Confidence 567789999999999999998877766655
No 111
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.02 E-value=1.5 Score=34.68 Aligned_cols=55 Identities=13% Similarity=0.123 Sum_probs=38.8
Q ss_pred CCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHh
Q 025384 97 DQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKK 155 (253)
Q Consensus 97 ~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k 155 (253)
......|..++|+++.|+.|.|.+|++.+++ ++ +.+.--+.+.........|..|
T Consensus 105 e~e~lcILDFyVheS~QR~G~G~~lfdyMl~---kE-~vephQ~a~DrPS~kLl~Fm~k 159 (264)
T KOG4601|consen 105 EEEALCILDFYVHESEQRSGNGFKLFDYMLK---KE-NVEPHQCAFDRPSAKLLQFMEK 159 (264)
T ss_pred ccCCceEEEEEeehhhhhcCchHHHHHHHHH---hc-CCCchheeccChHHHHHHHHHH
Confidence 3456789999999999999999999998876 23 3333334444444455666654
No 112
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=91.74 E-value=1 Score=38.25 Aligned_cols=46 Identities=17% Similarity=0.204 Sum_probs=34.0
Q ss_pred cEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecC
Q 025384 99 TLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYN 146 (253)
Q Consensus 99 ~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N 146 (253)
....|..+-|.|.||++|+|+.|++.+.......+. .+-+.|...+
T Consensus 216 ~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~p~--v~DiTVEdPs 261 (403)
T KOG2696|consen 216 IRPRISQMLILPPFQGKGLGSQLYEAIARDYLEEPT--VLDITVEDPS 261 (403)
T ss_pred hhhhhheeEEeccccCCchHHHHHHHHHHhhccCCc--eeEEEecCch
Confidence 445577888999999999999999999966666534 3444454444
No 113
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=91.64 E-value=6.2 Score=31.92 Aligned_cols=62 Identities=13% Similarity=0.079 Sum_probs=47.4
Q ss_pred CCCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEe
Q 025384 65 HSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVIS 144 (253)
Q Consensus 65 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~ 144 (253)
.+|++||++.+-...+ ....|.. .-+|++-..++|+-.+-.-+++|++. |...+++.-..
T Consensus 151 ~~g~LiaVav~D~l~d------------------~lSAVY~-FyDPd~~~~SLG~~~iL~qI~~ak~~-gl~y~YLGY~I 210 (240)
T PRK01305 151 GDGKLVAVAVTDVLDD------------------GLSAVYT-FYDPDEEHRSLGTFAILWQIELAKRL-GLPYVYLGYWI 210 (240)
T ss_pred eCCeEEEEEEEeccCC------------------ceeeEEE-eeCCCccccCCHHHHHHHHHHHHHHc-CCCeEeeeEEE
Confidence 3899999998865321 1122323 34999999999999999999999999 99999998665
Q ss_pred cC
Q 025384 145 YN 146 (253)
Q Consensus 145 ~N 146 (253)
.+
T Consensus 211 ~~ 212 (240)
T PRK01305 211 KG 212 (240)
T ss_pred CC
Confidence 44
No 114
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=91.43 E-value=0.33 Score=37.41 Aligned_cols=31 Identities=13% Similarity=0.130 Sum_probs=24.9
Q ss_pred EEEEEEEccCccccCHHHHHHHHHHHHHhcC
Q 025384 102 YILTLGVVDTYRNLGIASSLISEVIKYASNI 132 (253)
Q Consensus 102 ~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~ 132 (253)
.+..|.|.|.||++|+|+-|++..-+.++..
T Consensus 82 NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e 112 (188)
T PF01853_consen 82 NLSCILTLPPYQRKGYGRFLIDFSYELSRRE 112 (188)
T ss_dssp EESEEEE-GGGTTSSHHHHHHHHHHHHHHHT
T ss_pred eEeehhhcchhhhcchhhhhhhhHHHHhhcc
Confidence 4667889999999999999998877666655
No 115
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=90.78 E-value=0.65 Score=37.97 Aligned_cols=106 Identities=16% Similarity=0.175 Sum_probs=58.0
Q ss_pred eEEEeCCCCCHHHHHHHHHcc------CCCCC---------cHHHHHHhhcccc-eeeeeeeecCCCCCCCCceEEEEEE
Q 025384 12 ICYRPIRPSDLMILQQLHADA------FPIRY---------ESEFFQNVVNARD-IVSWGAVDRSRPNGHSDELIGFVTA 75 (253)
Q Consensus 12 i~ir~~~~~D~~~l~~l~~~~------~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ivG~~~~ 75 (253)
+.+||++..|++++.++..+. .|.+. ++..|+......+ .+.++..+ .+.|+++|++.+
T Consensus 2 lvvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLED-----setG~VvG~saI 76 (336)
T COG3138 2 LVVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLED-----SETGTVVGISAI 76 (336)
T ss_pred cccccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEe-----cCCceEEeEEEE
Confidence 468999999999999997753 33321 1223333332222 33333332 247999999876
Q ss_pred EEeecCccccc-----ccccccC-------------CCCCCcEEEEEEEEEccCccccCHHHHHH
Q 025384 76 RIVQANESEIG-----DLLSYDS-------------AKSDQTLVYILTLGVVDTYRNLGIASSLI 122 (253)
Q Consensus 76 ~~~~~~~~~~~-----~~~~~~~-------------~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll 122 (253)
.---.....+. ...+.++ .+.--.+..+.++.++|++|.-|-|+.|-
T Consensus 77 ~a~vGl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Lls 141 (336)
T COG3138 77 EAAVGLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLS 141 (336)
T ss_pred EEeeccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhh
Confidence 53211111000 0000000 01112345678999999999888887654
No 116
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=90.25 E-value=5 Score=33.38 Aligned_cols=85 Identities=21% Similarity=0.293 Sum_probs=64.3
Q ss_pred CCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhc--------CCCc-c
Q 025384 66 SDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASN--------IPTC-R 136 (253)
Q Consensus 66 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~--------~~g~-~ 136 (253)
.+.||+.+.+.+..+ ...++.-.+.|.+++|..=|..-|+=..|++.++-++++ ..|. -
T Consensus 177 RetPIAiisl~~~~~------------~St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si 244 (304)
T PF11124_consen 177 RETPIAIISLVPNKD------------QSTKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSI 244 (304)
T ss_pred cCCceEEEEeccccc------------cCCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceE
Confidence 688999998876332 233455678899999999999999999999998544433 2122 1
Q ss_pred EEEEEEEecCHHHHHHHHhCCCEEEE
Q 025384 137 ALYLHVISYNIPAIHLYKKMSFKCVR 162 (253)
Q Consensus 137 ~i~l~v~~~N~~a~~fy~k~GF~~~~ 162 (253)
.+.+++.+-.....+..+++||..+.
T Consensus 245 ~ll~d~YSFD~~~~k~L~~~gF~~i~ 270 (304)
T PF11124_consen 245 KLLVDVYSFDKDMKKTLKKKGFKKIS 270 (304)
T ss_pred EEEEEeeeccHHHHHHHHHCCCeeee
Confidence 45566778888999999999999876
No 117
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=89.71 E-value=3.3 Score=33.26 Aligned_cols=33 Identities=24% Similarity=0.172 Sum_probs=28.6
Q ss_pred CCCCcEEEEEEEEEccCccccCHHHHHHHHHHH
Q 025384 95 KSDQTLVYILTLGVVDTYRNLGIASSLISEVIK 127 (253)
Q Consensus 95 ~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~ 127 (253)
-+......|.+++|.+..|++||++.|++.+..
T Consensus 178 ~~~~~~~GIsRIWV~s~~Rr~gIAs~lldva~~ 210 (257)
T KOG3014|consen 178 LPEPAICGISRIWVSSLRRRKGIASLLLDVARC 210 (257)
T ss_pred CCCCcEeeeEEEEeehhhhhhhhHHHHHHHHHH
Confidence 344667889999999999999999999998864
No 118
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=89.34 E-value=1.3 Score=30.52 Aligned_cols=55 Identities=18% Similarity=0.122 Sum_probs=34.5
Q ss_pred ceEEEEEEEEeecCc----ccccccccccCC-CCCCcEEEEEEEEEccCccccCHHHHHH
Q 025384 68 ELIGFVTARIVQANE----SEIGDLLSYDSA-KSDQTLVYILTLGVVDTYRNLGIASSLI 122 (253)
Q Consensus 68 ~ivG~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~i~~l~V~~~~rg~GiGs~Ll 122 (253)
++||++-+....... ......+..... ......+.+.+++|+|+||+......|.
T Consensus 41 ~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 41 EVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred CEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 599999877654333 111111211111 1334889999999999999988777664
No 119
>PTZ00064 histone acetyltransferase; Provisional
Probab=88.38 E-value=0.83 Score=40.42 Aligned_cols=30 Identities=13% Similarity=0.173 Sum_probs=25.4
Q ss_pred EEEEEEccCccccCHHHHHHHHHHHHHhcC
Q 025384 103 ILTLGVVDTYRNLGIASSLISEVIKYASNI 132 (253)
Q Consensus 103 i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~ 132 (253)
+..|.|.|.||++|+|+.|++..-+..+..
T Consensus 387 LACILtLPpyQRKGYGklLIdfSYeLSrrE 416 (552)
T PTZ00064 387 LACILTLPCYQRKGYGKLLVDLSYKLSLKE 416 (552)
T ss_pred eEEEEecchhhhcchhhhhhhhhhhhhhhc
Confidence 667789999999999999998877766655
No 120
>PLN03239 histone acetyltransferase; Provisional
Probab=88.19 E-value=1.1 Score=38.03 Aligned_cols=30 Identities=10% Similarity=0.051 Sum_probs=25.1
Q ss_pred EEEEEEccCccccCHHHHHHHHHHHHHhcC
Q 025384 103 ILTLGVVDTYRNLGIASSLISEVIKYASNI 132 (253)
Q Consensus 103 i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~ 132 (253)
+..|.|.|.||++|+|+-|++..-+..+..
T Consensus 216 LaCIltLPpyQrkGyG~lLI~fSYeLSr~E 245 (351)
T PLN03239 216 LACILTFPAHQRKGYGRFLIAFSYELSKKE 245 (351)
T ss_pred eEEEEecChhhhcchhhhhHhhhhHhhhhc
Confidence 667789999999999999998876666555
No 121
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=87.94 E-value=5.3 Score=33.36 Aligned_cols=107 Identities=14% Similarity=0.044 Sum_probs=59.1
Q ss_pred eEEEeC---CCCCHHHHHHHHHccCCCC--CcHHHHHHhhc---ccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcc
Q 025384 12 ICYRPI---RPSDLMILQQLHADAFPIR--YESEFFQNVVN---ARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANES 83 (253)
Q Consensus 12 i~ir~~---~~~D~~~l~~l~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~ 83 (253)
+.+.+. ++++.+++.++..+|.... .+..++...+. ..+...+++.. .+|+++||+.+.+...
T Consensus 133 ~~~~~~~~~~~~~~~el~~i~~~W~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~------~dgki~af~~~~~~~~--- 203 (299)
T PF09924_consen 133 FEVVPIPELDPELRDELLEISDEWLKEKERPERGFIMGALEHFDELGLRGFVARV------ADGKIVAFAIGSPLGG--- 203 (299)
T ss_dssp -EEEE-----GGGHHHHHHHHHHHHHHCTHHHHHHHHHHHHTHHHHT-EEEEEEE-------TTEEEEEEEEEEEE----
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHhcCchhHHHHHhccccchhhcCceEEEEEE------CCCcEEEEEEEEEccC---
Confidence 566666 7889999999987765544 22333333332 23444555543 3899999999986431
Q ss_pred cccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEE
Q 025384 84 EIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVI 143 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~ 143 (253)
...+.++-.--+++ -=+|+-..|+..+++++++. |++.+.|...
T Consensus 204 --------------~~~~~~~~~k~~~~-a~~G~~e~l~~~~~~~~~~~-g~~~lnLg~a 247 (299)
T PF09924_consen 204 --------------RDGWSIDFEKADPD-APKGIYEFLNVEFAEHLKAE-GVEYLNLGFA 247 (299)
T ss_dssp --------------TTEEEEEEEEE-TT--STTHHHHHHHHHHHHS--T-T--EEE----
T ss_pred --------------CccEEEEEEecCCC-CCCcHHHHHHHHHHHhhhhC-CceEEEcccc
Confidence 11222222222344 34789999999999999988 8888776443
No 122
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=86.62 E-value=4.4 Score=35.05 Aligned_cols=121 Identities=17% Similarity=0.149 Sum_probs=74.5
Q ss_pred ceEEEe-----CCCCCHHHHHHHHHccCCCCC-----cHHHHHHhhccc--ceeeeeeeecCCCCCCCCceEEEEEEEEe
Q 025384 11 TICYRP-----IRPSDLMILQQLHADAFPIRY-----ESEFFQNVVNAR--DIVSWGAVDRSRPNGHSDELIGFVTARIV 78 (253)
Q Consensus 11 ~i~ir~-----~~~~D~~~l~~l~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ivG~~~~~~~ 78 (253)
.++++. +++++++.+.+++.+.+...| ..+||..+.... ....+.+.. ++++||++....
T Consensus 199 Gi~~~~l~G~~i~~~~~~~f~~~Y~~Ty~k~~~~~yLt~~FF~~l~~~m~~~~~l~~A~~-------~g~~Va~aL~l~- 270 (370)
T PF04339_consen 199 GIRIRTLTGDEITDEDWDRFYRLYQNTYAKRWGRPYLTREFFEQLAETMPEQVVLVVARR-------DGQPVAFALCLR- 270 (370)
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCCChhhcHHHHHHHHHhCcCCEEEEEEEE-------CCeEEEEEEEEE-
Confidence 355554 455667888888776544332 367777777653 334444544 899999998875
Q ss_pred ecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCC
Q 025384 79 QANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSF 158 (253)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF 158 (253)
+....|-...+..+++.+.= -....-+.+++|.+. |++++........+ ...||
T Consensus 271 ------------------~~~~LyGRYwG~~~~~~~LH-Fe~cYYq~Ie~aI~~-Gl~~f~~GaqGEHK------~~RGf 324 (370)
T PF04339_consen 271 ------------------GDDTLYGRYWGCDEEIPFLH-FELCYYQGIEYAIEH-GLRRFEPGAQGEHK------IARGF 324 (370)
T ss_pred ------------------eCCEEEEeeecccccccCcc-hHHHHHHHHHHHHHc-CCCEEECCcchhHH------HHcCC
Confidence 23444554555555554332 122245679999999 99997766443221 34699
Q ss_pred EEEEEEc
Q 025384 159 KCVRRLH 165 (253)
Q Consensus 159 ~~~~~~~ 165 (253)
+++.+..
T Consensus 325 ~P~~t~S 331 (370)
T PF04339_consen 325 EPVPTYS 331 (370)
T ss_pred cccccee
Confidence 9877653
No 123
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=86.51 E-value=4.6 Score=34.58 Aligned_cols=86 Identities=15% Similarity=0.227 Sum_probs=63.3
Q ss_pred CCHHHHHHHHHccCCCCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccccCCCCCCc
Q 025384 20 SDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQT 99 (253)
Q Consensus 20 ~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (253)
=|++.+..+.+++|.....+.++...++.+-...+++ |.--|.+.+...+. .+..
T Consensus 345 Ldl~r~q~LI~~SFkRTLd~h~y~~r~~~~La~~iVs----------gdY~g~aIlTyegs---------------~~~~ 399 (495)
T COG5630 345 LDLPRLQHLIQSSFKRTLDPHYYETRINTPLARAIVS----------GDYRGAAILTYEGS---------------GENN 399 (495)
T ss_pred cCcHHHHHHHHHHHhhccCHHHHHHhccCcceeEEee----------ccceeeEEEEeecc---------------CCCC
Confidence 3678899999999998888888888887665554443 44556666664321 1235
Q ss_pred EEEEEEEEEccCccc-cCHHHHHHHHHHHHHh
Q 025384 100 LVYILTLGVVDTYRN-LGIASSLISEVIKYAS 130 (253)
Q Consensus 100 ~~~i~~l~V~~~~rg-~GiGs~Ll~~~~~~a~ 130 (253)
..|+.-++|.++.|| -||+..+..-+.+...
T Consensus 400 vpYLDKfAVl~~aQGs~gisd~vfniM~e~fP 431 (495)
T COG5630 400 VPYLDKFAVLDDAQGSEGISDAVFNIMREEFP 431 (495)
T ss_pred CcceeeeeccccccccchHHHHHHHHHHHhCc
Confidence 678999999999999 8999999887766444
No 124
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=86.11 E-value=11 Score=32.08 Aligned_cols=126 Identities=11% Similarity=0.151 Sum_probs=74.4
Q ss_pred EEEeCCCCCHHHHHHHHHccC-----CCCCcHHHHHHhhcccc--eeeeeeeecCCCCCCCCceEEEEEEEEeecCcccc
Q 025384 13 CYRPIRPSDLMILQQLHADAF-----PIRYESEFFQNVVNARD--IVSWGAVDRSRPNGHSDELIGFVTARIVQANESEI 85 (253)
Q Consensus 13 ~ir~~~~~D~~~l~~l~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~ 85 (253)
-+|++++.|++++.+++.+.. ...++++.+..++-..+ ...|+... .+|+|-+|+.+...+. .+
T Consensus 262 G~R~me~kDvp~V~~Ll~~yl~qf~la~~f~~eev~Hwf~p~e~VV~syVves------p~g~ITDF~SFy~lps---Tv 332 (421)
T KOG2779|consen 262 GLREMEEKDVPAVFRLLRNYLKQFELAPVFDEEEVEHWFLPRENVVYSYVVES------PNGKITDFCSFYSLPS---TV 332 (421)
T ss_pred CcccccccchHHHHHHHHHHHHheecccccCHHHhHhhcccccceEEEEEEEC------CCCcccceeeEEeccc---cc
Confidence 479999999999999977632 22344454554443322 34444433 4788999998875321 11
Q ss_pred cccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEE
Q 025384 86 GDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKC 160 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~ 160 (253)
.+ ++....-..+|.. ..|+.+-+ =..|+..++-.++.. |+....+...-+|. .|.++++|.+
T Consensus 333 ~~----~~~~ktl~aaYly-Y~v~~~t~----~~~lvnDalilak~~-gfDVFNAld~meN~---~fl~~LkFg~ 394 (421)
T KOG2779|consen 333 MG----NPKYKTLQAAYLY-YNVATSTP----LLQLVNDALILAKQK-GFDVFNALDLMENE---SFLKDLKFGP 394 (421)
T ss_pred cC----CCCcceeeeeeEE-EeccCCcc----HHHHHHHHHHHHHhc-CCceeehhhhhhhh---hHHHhcCcCc
Confidence 11 1112222344442 23333211 345666667777777 88877776666664 5999999987
No 125
>PRK04531 acetylglutamate kinase; Provisional
Probab=85.67 E-value=5.2 Score=35.01 Aligned_cols=98 Identities=16% Similarity=0.160 Sum_probs=65.9
Q ss_pred CCCCCHHHHHHHHHccCCCCCcHHHHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccccCCCC
Q 025384 17 IRPSDLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDSAKS 96 (253)
Q Consensus 17 ~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (253)
+..=|++.+.++...+|...-.+.++.+ . ..+.++. ++..=|.+.+..
T Consensus 259 ~~~~d~~~l~~ll~~sf~r~~~~~y~~~---~---~~~~~y~-------~~~y~~~Aiv~~------------------- 306 (398)
T PRK04531 259 WDELDLERLNLLIESSFGRTLKPDYFDT---T---QLLRAYV-------SENYRAAAILTE------------------- 306 (398)
T ss_pred hhhcCHHHHHHHHhhhcccchHHHHhcc---C---CceEEEE-------eCCCcEEEEEec-------------------
Confidence 3445888999999888887666666652 1 2233332 455555555542
Q ss_pred CCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHH
Q 025384 97 DQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLY 153 (253)
Q Consensus 97 ~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy 153 (253)
.+...|+..++|.+.-||.|++-.+.+.+.+. ...+...+.++|+. .++|
T Consensus 307 ~~~~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~------~~~L~Wrsr~~n~~-~~Wy 356 (398)
T PRK04531 307 TGGGPYLDKFAVLDDARGEGLGRAVWNVMREE------TPQLFWRSRHNNTI-NKFY 356 (398)
T ss_pred CCCceEeEEEEEccchhhcChHHHHHHHHHhh------CCceEEEcCCCCCc-ccee
Confidence 13457899999999999999999999988863 34666667767743 3444
No 126
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=85.56 E-value=0.88 Score=39.96 Aligned_cols=30 Identities=13% Similarity=0.173 Sum_probs=24.5
Q ss_pred EEEEEEccCccccCHHHHHHHHHHHHHhcC
Q 025384 103 ILTLGVVDTYRNLGIASSLISEVIKYASNI 132 (253)
Q Consensus 103 i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~ 132 (253)
+..|.|.|.||++|+|+.|++..-+..+..
T Consensus 309 LaCIltlP~yQrkGyG~~LI~~SYeLSr~e 338 (450)
T PLN00104 309 LACILTLPPYQRKGYGKFLIAFSYELSKRE 338 (450)
T ss_pred eEEEEecchhhhcchhheehhheehhhhcc
Confidence 667789999999999999998776655544
No 127
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=85.23 E-value=5.2 Score=33.39 Aligned_cols=104 Identities=16% Similarity=0.180 Sum_probs=70.3
Q ss_pred EEEeCCCCCHHHHHHHHHccCCC--------CCcHHHHHHhhcccce---eeeeeeecCCCCCCCCceEEEEEEEEeecC
Q 025384 13 CYRPIRPSDLMILQQLHADAFPI--------RYESEFFQNVVNARDI---VSWGAVDRSRPNGHSDELIGFVTARIVQAN 81 (253)
Q Consensus 13 ~ir~~~~~D~~~l~~l~~~~~~~--------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~ 81 (253)
.+.......++++..+..+.+-. .|..+|++..+..++. +...... ....++|||+.+.+..
T Consensus 83 ~idv~N~~ql~dv~~lL~eNYVED~~ag~rf~Y~~EFl~Wal~~pg~kK~whigvRv-----k~t~klVaFIsa~p~~-- 155 (451)
T COG5092 83 VIDVANKKQLEDVFVLLEENYVEDIYAGHRFRYSVEFLQWALDGPGGKKRWHIGVRV-----KGTQKLVAFISAKPHL-- 155 (451)
T ss_pred eEeccccchhHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHhhcCCCCceeeEEEEEE-----cccceeEEEEecceeE--
Confidence 34556667888888888776533 4556777777766543 2222222 1245899999886521
Q ss_pred cccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcC
Q 025384 82 ESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNI 132 (253)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~ 132 (253)
.+.......++.+-.++||.+.|++.+.-.|++.+-..+...
T Consensus 156 ---------v~vRgK~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~ 197 (451)
T COG5092 156 ---------VSVRGKRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANVD 197 (451)
T ss_pred ---------EEEcccccccceEEEEEEehhhhhCccchHHHHHHHHhhhhh
Confidence 112223345778999999999999999999999998877655
No 128
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=73.60 E-value=14 Score=28.05 Aligned_cols=90 Identities=16% Similarity=0.137 Sum_probs=57.5
Q ss_pred cEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhC---CC-------EEEEEEcceE
Q 025384 99 TLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKM---SF-------KCVRRLHGFY 168 (253)
Q Consensus 99 ~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~---GF-------~~~~~~~~~~ 168 (253)
-.+.+.-.+|.|+.+|.||+..+ ..+...+.+. |+...+..|.. +..+.++++ |. ..-.+.++.+
T Consensus 84 LVaElGLygVRpDLEGlGi~hs~-r~m~PvLq~L-gVPF~FGtVR~---al~~Hv~R~~R~gl~ti~~gvrVRSTlpdv~ 158 (196)
T PF02474_consen 84 LVAELGLYGVRPDLEGLGISHSM-RVMYPVLQEL-GVPFGFGTVRH---ALRNHVERLCRNGLATILSGVRVRSTLPDVY 158 (196)
T ss_pred eEEEEEEEEeeccccccccchhh-hhhhhHHHhc-CCCeecccchH---HHHHHHHHHhccchhhcccCceeeccCcccc
Confidence 34566778899999999999976 5666666666 77776666653 344455544 44 2334445544
Q ss_pred E--eCCeeeeeEEEEEEecCCCCCCCH
Q 025384 169 L--INGQHYDSYLFVYYINGGRSPCSP 193 (253)
Q Consensus 169 ~--~~g~~~d~~~~~~~l~~~~~~~~~ 193 (253)
. ..-+..|.+.++..+...-+.|..
T Consensus 159 ~dlppTr~ed~lv~V~Pi~r~~seWP~ 185 (196)
T PF02474_consen 159 LDLPPTRIEDVLVVVLPIGRSMSEWPA 185 (196)
T ss_pred CCCCCcccccceEEEEcCCCccccCCC
Confidence 3 223446888888888765554543
No 129
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=73.49 E-value=10 Score=25.20 Aligned_cols=27 Identities=19% Similarity=0.100 Sum_probs=23.7
Q ss_pred ccEEEEEEEecCHHHHHHHHhCCCEEE
Q 025384 135 CRALYLHVISYNIPAIHLYKKMSFKCV 161 (253)
Q Consensus 135 ~~~i~l~v~~~N~~a~~fy~k~GF~~~ 161 (253)
...+.=.|...|..+++|.+.+|++..
T Consensus 56 Y~~l~N~V~~~N~~HIRfLk~lGA~f~ 82 (86)
T PF11090_consen 56 YPVLWNFVWVGNKSHIRFLKSLGAVFH 82 (86)
T ss_pred hhheeEEEEeCCHHHHHHHHhcCcEEc
Confidence 456888899999999999999999864
No 130
>PHA02769 hypothetical protein; Provisional
Probab=70.35 E-value=4.2 Score=28.47 Aligned_cols=44 Identities=20% Similarity=0.223 Sum_probs=28.5
Q ss_pred HHHHHHHHHH---HHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 118 ASSLISEVIK---YASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 118 Gs~Ll~~~~~---~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
|-.|++.+.+ ..++. |+..+ ++...-..+..+|.|.||+.+|..
T Consensus 94 gd~lvnfl~~l~~k~~~d-g~evl--wtlgfpdhsnaly~kagfk~vg~t 140 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKKD-GFEVL--WTLGFPDHSNALYKKAGFKLVGQT 140 (154)
T ss_pred hHHHHHHHHHHHHHHhcC-CeEEE--EEecCCCcchhHHhhhhhhHhccc
Confidence 5566665544 44555 65543 344434457889999999998865
No 131
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=69.25 E-value=60 Score=26.33 Aligned_cols=64 Identities=13% Similarity=0.144 Sum_probs=47.1
Q ss_pred CCCCCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEE
Q 025384 63 NGHSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHV 142 (253)
Q Consensus 63 ~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v 142 (253)
++..|++|+++..-+..+. ...+..+ -+|++...++|+-.+-.-+.+|.+. |...++|.-
T Consensus 156 ~~~~G~LvAVavtDvL~dG------------------lSsVY~F-ydPd~s~~SLGt~~iL~~I~~aq~~-~l~yvYLGY 215 (253)
T COG2935 156 GKGEGKLVAVAVTDVLPDG------------------LSSVYTF-YDPDMSKRSLGTLSILDQIAIAQRL-GLPYVYLGY 215 (253)
T ss_pred CCCCCcEEEEEeeecccCc------------------ceeEEEE-eCCChhhhcchHHHHHHHHHHHHHh-CCCeEEEEE
Confidence 3457899998877653321 1123333 4999999999999888888889988 999999986
Q ss_pred EecC
Q 025384 143 ISYN 146 (253)
Q Consensus 143 ~~~N 146 (253)
...+
T Consensus 216 wI~~ 219 (253)
T COG2935 216 WIKG 219 (253)
T ss_pred EECC
Confidence 6554
No 132
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins.; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity; PDB: 3LEC_A 3KU1_G 3KR9_A 3GNL_B.
Probab=68.82 E-value=38 Score=26.68 Aligned_cols=65 Identities=15% Similarity=0.216 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHHHhcC-CCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcceEEeCCeeeeeEEEEE
Q 025384 116 GIASSLISEVIKYASNI-PTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVY 182 (253)
Q Consensus 116 GiGs~Ll~~~~~~a~~~-~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~~~~~g~~~d~~~~~~ 182 (253)
|.|-.++..+++..... ....++.|.........+++..++||...... ....+|++|..+...+
T Consensus 74 GMGG~lI~~ILe~~~~~~~~~~~lILqP~~~~~~LR~~L~~~gf~I~~E~--lv~e~~~~YeIi~~~~ 139 (205)
T PF04816_consen 74 GMGGELIIEILEAGPEKLSSAKRLILQPNTHAYELRRWLYENGFEIIDED--LVEENGRFYEIIVAER 139 (205)
T ss_dssp EE-HHHHHHHHHHTGGGGTT--EEEEEESS-HHHHHHHHHHTTEEEEEEE--EEEETTEEEEEEEEEE
T ss_pred cCCHHHHHHHHHhhHHHhccCCeEEEeCCCChHHHHHHHHHCCCEEEEeE--EEeECCEEEEEEEEEe
Confidence 56777888887766543 24456666666666677899999999997754 3445666555444443
No 133
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=68.61 E-value=11 Score=32.72 Aligned_cols=30 Identities=13% Similarity=0.171 Sum_probs=23.6
Q ss_pred EEEEEEccCccccCHHHHHHHHHHHHHhcC
Q 025384 103 ILTLGVVDTYRNLGIASSLISEVIKYASNI 132 (253)
Q Consensus 103 i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~ 132 (253)
+..|-|.|.||++|+|+.|++.--+..+..
T Consensus 263 laCILtLPpyQRkGYGklLIdFSYeLSr~E 292 (396)
T KOG2747|consen 263 LACILTLPPYQRKGYGKLLIDFSYELSRRE 292 (396)
T ss_pred eeeeeecChhhhcccchhhhhhhhhhhccc
Confidence 556779999999999999988765544443
No 134
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=68.20 E-value=19 Score=32.73 Aligned_cols=60 Identities=20% Similarity=0.190 Sum_probs=42.3
Q ss_pred CCCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEE
Q 025384 65 HSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVI 143 (253)
Q Consensus 65 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~ 143 (253)
.+|+|+||+.+.+....++-..+.. --+|+.- +|+-.-|...++.+++++ |++++.+...
T Consensus 400 ~~g~VvaFa~l~~~~~~~~~SlDlM-----------------R~sp~ap-~g~mdfLf~~li~~aKe~-G~~~fsLgmA 459 (538)
T COG2898 400 NEGEVVAFANLMPTGGKEGYSLDLM-----------------RRSPDAP-NGTMDFLFSELILWAKEE-GYQRFSLGMA 459 (538)
T ss_pred CCCCeEEEEeecccCCcceeEEEee-----------------ecCCCCC-chHHHHHHHHHHHHHHHc-CCeEEecCCc
Confidence 4788999999986544333333332 2233332 588999999999999999 9999887544
No 135
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=55.39 E-value=5.8 Score=33.58 Aligned_cols=21 Identities=19% Similarity=0.335 Sum_probs=17.7
Q ss_pred EEEEEEccCccccCHHHHHHH
Q 025384 103 ILTLGVVDTYRNLGIASSLIS 123 (253)
Q Consensus 103 i~~l~V~~~~rg~GiGs~Ll~ 123 (253)
+..|-+.|.||++|+|+.|++
T Consensus 265 LaCILtLP~yQRrGYG~lLId 285 (395)
T COG5027 265 LACILTLPPYQRRGYGKLLID 285 (395)
T ss_pred eEEEEecChhHhcccceEeee
Confidence 556779999999999998864
No 136
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=54.61 E-value=89 Score=26.38 Aligned_cols=131 Identities=13% Similarity=0.169 Sum_probs=68.9
Q ss_pred ceEEEeCCCCCHHHHHHHHHccCCC-----CCcH----HHHHH---hhcccceeeeeeeecCCCCCCCCceEEEEEEEEe
Q 025384 11 TICYRPIRPSDLMILQQLHADAFPI-----RYES----EFFQN---VVNARDIVSWGAVDRSRPNGHSDELIGFVTARIV 78 (253)
Q Consensus 11 ~i~ir~~~~~D~~~l~~l~~~~~~~-----~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~ 78 (253)
+--+|+++.+|.+++.+++.+-... .... .+|.. ....+-.+.++... .+|+|-+|..+...
T Consensus 258 t~GlR~~e~kD~~~v~~L~~~y~~Rfel~~~f~~Eei~h~F~~~~~v~~~~v~~syvVe~------p~gkItdFfsFysl 331 (451)
T COG5092 258 TEGLRLAEEKDMEDVARLYLEYSRRFELYEEFRFEEIVHTFRPVKNVVDKQVTYSYVVEE------PNGKITDFFSFYSL 331 (451)
T ss_pred CcccchhhhhCHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcccccccccCceEEEEEEeC------CCCccccceEEEec
Confidence 3458999999999999997653211 0111 11111 11112223333332 47788888777643
Q ss_pred ecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHH-----------HHHHHHHHHHhcCCCccEEEEEEEecCH
Q 025384 79 QANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIAS-----------SLISEVIKYASNIPTCRALYLHVISYNI 147 (253)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs-----------~Ll~~~~~~a~~~~g~~~i~l~v~~~N~ 147 (253)
+-.. + -++...+...+|+...+-+..+.. +.. .|+..++-.|+.. |+....+.+..+|.
T Consensus 332 p~t~---i----~n~kykdiq~gYLYYya~d~~~kd--~~~~a~~a~~~r~~e~v~Da~ilak~~-~~DVFNalt~~dN~ 401 (451)
T COG5092 332 PFTT---I----ENKKYKDIQGGYLYYYAGDDQFKD--FDPKATKALKTRVAEMVGDAMILAKVE-GCDVFNALTMMDNS 401 (451)
T ss_pred ccee---e----cCccccccceeEEEEEccCccccc--cChHHHHHHHHHHHHHHHHHHHHHHHc-CCchhhhhhhccch
Confidence 2110 0 012233445667766666553322 222 2333334455555 77776666666663
Q ss_pred HHHHHHHhCCCEE
Q 025384 148 PAIHLYKKMSFKC 160 (253)
Q Consensus 148 ~a~~fy~k~GF~~ 160 (253)
.|...++|.+
T Consensus 402 ---lFL~dLkFg~ 411 (451)
T COG5092 402 ---LFLADLKFGC 411 (451)
T ss_pred ---hHHHhcCccC
Confidence 4888899987
No 137
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]
Probab=53.72 E-value=1.6e+02 Score=25.92 Aligned_cols=110 Identities=11% Similarity=0.114 Sum_probs=73.7
Q ss_pred CCceEEEeCCCCC-----HHHHHHHHH---------ccCCCCCcHHHHHHhhcc----cceeeeeeeecCCCCCCCCceE
Q 025384 9 HPTICYRPIRPSD-----LMILQQLHA---------DAFPIRYESEFFQNVVNA----RDIVSWGAVDRSRPNGHSDELI 70 (253)
Q Consensus 9 ~~~i~ir~~~~~D-----~~~l~~l~~---------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~iv 70 (253)
+..+.+..+...| ++.+.++-. +.|...|..+++...... .....+.... +|.+|
T Consensus 212 vG~~r~v~a~s~d~~e~~~~~l~~~Kr~rfa~~G~~Dlf~~~~t~~fl~dL~~~~~~d~~~rl~gL~~-------G~~lv 284 (406)
T COG5653 212 VGAVRFVAARSPDEVEALFATLFRWKRLRFARTGQFDLFRAGWTRDFLRDLFTQRAEDGSGRLFGLHA-------GGRLV 284 (406)
T ss_pred cCCeeEEecCCCchHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHhccCcCCceEEEEEee-------CCEEE
Confidence 3456777766655 344444422 356677777777776653 2223333332 78888
Q ss_pred EEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEec
Q 025384 71 GFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISY 145 (253)
Q Consensus 71 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~ 145 (253)
+...... .+.+.+-.-..++|++-+--=|..|+-.+++++..+ |+.++-+.|..+
T Consensus 285 AV~~~lr-------------------~~~t~h~~l~a~dpe~~~~SPG~~lf~d~i~~~~~~-g~~~~DfgvG~q 339 (406)
T COG5653 285 AVHGLLR-------------------QGGTYHAWLGAIDPEFARASPGMLLFLDLIEWACGQ-GLARFDFGVGDQ 339 (406)
T ss_pred EEEeeec-------------------cCCEEEEEeeccCHHHhhcCchHHHHHHHHHHHhcC-CCeEEeecCCCh
Confidence 8877653 345555556778999998888999999999999999 888877766543
No 138
>cd07235 MRD Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.
Probab=49.75 E-value=18 Score=25.03 Aligned_cols=16 Identities=13% Similarity=0.555 Sum_probs=13.5
Q ss_pred HHHHHHHHhCCCEEEE
Q 025384 147 IPAIHLYKKMSFKCVR 162 (253)
Q Consensus 147 ~~a~~fy~k~GF~~~~ 162 (253)
.+|+.||+++||+...
T Consensus 12 ~~a~~FY~~LGf~~~~ 27 (122)
T cd07235 12 AKSLDFYRRLGFDFPE 27 (122)
T ss_pred HHHHHHHHHhCceecC
Confidence 4899999999998753
No 139
>KOG4387 consensus Ornithine decarboxylase antizyme [Amino acid transport and metabolism]
Probab=48.80 E-value=1e+02 Score=23.68 Aligned_cols=77 Identities=10% Similarity=0.127 Sum_probs=52.9
Q ss_pred EccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHH---HHHHHhCCCEEEEEEcceEEeCCeeeeeEEEEEEe
Q 025384 108 VVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPA---IHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYI 184 (253)
Q Consensus 108 V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a---~~fy~k~GF~~~~~~~~~~~~~g~~~d~~~~~~~l 184 (253)
.-|+-.=-+.-++=+-+++++|-+++.+.++.+....+|..- .+-+.=.||+++..-...- -...+.+.|++.+
T Consensus 107 ~IPdq~l~~gsKe~lvalLEfAEekl~~d~Vfi~F~K~R~dr~~LlrtfsyvGFEpvrp~HP~~---pp~~~~ffM~Y~~ 183 (191)
T KOG4387|consen 107 EIPDQALDVGSKEGLVALLEFAEEKLHVDKVFICFDKNREDRAALLRTFSYVGFEPVRPDHPVV---PPRPDVFFMVYPL 183 (191)
T ss_pred ecCcchhcccchHhHHHHHHHHHHhhccceEEEEEecCccChHhhhhhehcceeeecCCCCCCC---CCccceEEEEEee
Confidence 344444456667778889999999999999999988776443 4445557998876431111 2235889999988
Q ss_pred cCC
Q 025384 185 NGG 187 (253)
Q Consensus 185 ~~~ 187 (253)
...
T Consensus 184 er~ 186 (191)
T KOG4387|consen 184 ERD 186 (191)
T ss_pred ccc
Confidence 654
No 140
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=48.01 E-value=51 Score=27.07 Aligned_cols=95 Identities=17% Similarity=0.176 Sum_probs=53.0
Q ss_pred EEeCCCCCHHHHHHHHHccCCCCC-----cHHHHHHhhcccc--eeeeeeeecCCCCCCCCceEEEEEEEEeecCccccc
Q 025384 14 YRPIRPSDLMILQQLHADAFPIRY-----ESEFFQNVVNARD--IVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIG 86 (253)
Q Consensus 14 ir~~~~~D~~~l~~l~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~ 86 (253)
++++..=..+++.+++.+.|...| ..+.+...+..-. ....+... +|++|++-.+....
T Consensus 129 v~~v~~~S~~Ela~iY~~Lf~~Rwg~~~~~~~~l~e~f~~Lr~~~fG~vL~l-------~~~P~Aiqlv~k~e------- 194 (264)
T PF07395_consen 129 VRPVSEFSPEELADIYIDLFQKRWGFRCYGKEHLAEFFSELRHMIFGSVLFL-------NGQPCAIQLVYKVE------- 194 (264)
T ss_pred EEEHHHCCHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHhHHhheeeEEEE-------CCcceEEEEEEEec-------
Confidence 455444444555555555443332 2333333333222 22333333 89999998776532
Q ss_pred ccccccCCCCCCcEEEEE--EEEEccCccccCHHHHHH----HHHHHHHhcC
Q 025384 87 DLLSYDSAKSDQTLVYIL--TLGVVDTYRNLGIASSLI----SEVIKYASNI 132 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~--~l~V~~~~rg~GiGs~Ll----~~~~~~a~~~ 132 (253)
...++++. ..+++|+++..-.||.|+ +.+.+++.+.
T Consensus 195 ----------s~~wv~~D~iNgG~Dp~~~~~SpGSiL~w~Ni~~A~~~~~~~ 236 (264)
T PF07395_consen 195 ----------SPKWVYFDYINGGYDPECRDFSPGSILMWLNIQDAWEYCRAQ 236 (264)
T ss_pred ----------CCCeEEEecccCccCcccccCCCccEEEEeeHHHHHHHHHHh
Confidence 23333333 457899999998998773 5566666665
No 141
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=47.27 E-value=42 Score=26.58 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=25.2
Q ss_pred CccEEEEEE---EecCHHHHHHHHhCCCEEEEEE
Q 025384 134 TCRALYLHV---ISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 134 g~~~i~l~v---~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
|++++.+.+ .+-|+..+.|++++||+.+...
T Consensus 117 ~a~ri~vlTPY~~evn~~e~ef~~~~Gfeiv~~~ 150 (238)
T COG3473 117 GAQRISVLTPYIDEVNQREIEFLEANGFEIVDFK 150 (238)
T ss_pred CcceEEEeccchhhhhhHHHHHHHhCCeEEEEee
Confidence 777877664 5679999999999999987743
No 142
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=47.19 E-value=52 Score=23.82 Aligned_cols=47 Identities=13% Similarity=0.047 Sum_probs=36.9
Q ss_pred CccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEE
Q 025384 111 TYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVR 162 (253)
Q Consensus 111 ~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~ 162 (253)
+=||-|||+.+++.+.+.+.+ .+.+...-+|.-|-.-..|.|-..-.
T Consensus 6 DGQGGGiG~~iv~~lr~~~~~-----~~eI~AlGTNa~AT~~MlKaGA~~gA 52 (131)
T PF12953_consen 6 DGQGGGIGKQIVEKLRKELPE-----EVEIIALGTNAIATSAMLKAGANEGA 52 (131)
T ss_pred eCCCChhHHHHHHHHHHhCCC-----CcEEEEEehhHHHHHHHHHcCCCCcc
Confidence 348999999999999886554 36677778888888889999987633
No 143
>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=46.41 E-value=24 Score=24.33 Aligned_cols=22 Identities=9% Similarity=0.217 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCCEEEEEEcceE
Q 025384 147 IPAIHLYKKMSFKCVRRLHGFY 168 (253)
Q Consensus 147 ~~a~~fy~k~GF~~~~~~~~~~ 168 (253)
.++++||+.+||+.......+.
T Consensus 13 ~~s~~FY~~LGf~~~~~~~~~~ 34 (113)
T cd08356 13 AESKQFYQALGFELEWENDNLA 34 (113)
T ss_pred HHHHHHHHHhCCeeEecCCCEE
Confidence 4789999999999977654443
No 144
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=46.08 E-value=1.2e+02 Score=30.57 Aligned_cols=60 Identities=7% Similarity=0.078 Sum_probs=43.4
Q ss_pred CCCceEEEEEEEEeecCcccccccccccCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEe
Q 025384 65 HSDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVIS 144 (253)
Q Consensus 65 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~ 144 (253)
.+|+++||+.+.+.. .++ +.+.-+--+|+. =.|+.-.|+..++.++++. |++.+.|...+
T Consensus 428 ~~G~i~af~s~~p~~-~~g-----------------~slDLMRr~pda-pnGvmE~L~~~l~~~~k~~-G~~~~sLg~AP 487 (1094)
T PRK02983 428 ADGQVVALLSFVPWG-RRG-----------------LSLDLMRRSPDA-PNGVIELMVAELALEAESL-GITRISLNFAV 487 (1094)
T ss_pred CCCeEEEEEEEeeeC-CCC-----------------EEEEecccCCCC-CCCHHHHHHHHHHHHHHHc-CCCEEEechhh
Confidence 378999999998632 111 223223334553 6899999999999999999 99999987654
No 145
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=45.31 E-value=1e+02 Score=21.52 Aligned_cols=49 Identities=18% Similarity=0.240 Sum_probs=37.1
Q ss_pred CcEEEEEEEEEccCccc-cCHHHHHHHHHHHHHhcCCCccE-EEEEEEecCHHHHHHH
Q 025384 98 QTLVYILTLGVVDTYRN-LGIASSLISEVIKYASNIPTCRA-LYLHVISYNIPAIHLY 153 (253)
Q Consensus 98 ~~~~~i~~l~V~~~~rg-~GiGs~Ll~~~~~~a~~~~g~~~-i~l~v~~~N~~a~~fy 153 (253)
....|+..++|.+.-|| .|++-.+.+++.+ .... +...+.++|+. .++|
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~------~fp~~L~Wrsr~~n~~-n~Wy 87 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLD------GFPNELIWRSRKDNPV-NKWY 87 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHH------cCCCceEEEeCCCCcc-cceE
Confidence 46789999999999997 8999999998887 3333 66667766643 3444
No 146
>PF00925 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: IPR000926 GTP cyclohydrolase II catalyses the first committed step in the biosynthesis of riboflavin. The enzyme converts GTP and water to formate, 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)- pyrimidine and pyrophosphate, and requires magnesium as a cofactor. It is sometimes found as a bifunctional enzyme with 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP_synthase) IPR000422 from INTERPRO. ; GO: 0003935 GTP cyclohydrolase II activity, 0009231 riboflavin biosynthetic process; PDB: 2BZ0_B 2BZ1_A.
Probab=45.21 E-value=37 Score=25.78 Aligned_cols=47 Identities=15% Similarity=0.321 Sum_probs=25.3
Q ss_pred ccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEc
Q 025384 109 VDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLH 165 (253)
Q Consensus 109 ~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~ 165 (253)
.+++|.-|+|.++|+.+ |++++.|. ++|+.-..-.+.+|-++++..+
T Consensus 122 ~~d~R~ygigaqIL~dL--------GV~~~rLL--tnnp~k~~~L~g~gleV~~~vp 168 (169)
T PF00925_consen 122 PEDLRDYGIGAQILRDL--------GVKKMRLL--TNNPRKYVALEGFGLEVVERVP 168 (169)
T ss_dssp -S----THHHHHHHHHT--------T--SEEEE---S-HHHHHHHHHTT--EEEEE-
T ss_pred ccccccHHHHHHHHHHc--------CCCEEEEC--CCChhHHHHHhcCCCEEEEEec
Confidence 46667777777776554 88887554 4577777888889988877653
No 147
>COG0807 RibA GTP cyclohydrolase II [Coenzyme metabolism]
Probab=44.25 E-value=51 Score=25.74 Aligned_cols=50 Identities=20% Similarity=0.321 Sum_probs=35.9
Q ss_pred EEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 105 TLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 105 ~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
.++-.+++|.-|+|.++|+.+ |++.|.|-+. |+.-+.-.+..|-.++.+.
T Consensus 119 ~lg~~~D~R~ygigAqIL~dL--------GI~~irLLtn--np~K~~~l~~~Gi~vverv 168 (193)
T COG0807 119 ALGFPADERDYGIGAQILKDL--------GIKKIRLLTN--NPRKIYGLEGFGINVVERV 168 (193)
T ss_pred hhcCCchHHHHHHHHHHHHHc--------CCcEEEEecC--ChHHHHHHHhCCceEEEEe
Confidence 445577889999999988665 9999888765 6555555667776665544
No 148
>PF13725 tRNA_bind_2: Possible tRNA binding domain; PDB: 2ZPA_B.
Probab=40.98 E-value=5.4 Score=27.31 Aligned_cols=46 Identities=20% Similarity=0.169 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhhcCCCCccccccccCeee--eeecCCccccccCcceeeC
Q 025384 205 RRGLNSVAARLRKNEEKWPKWAKCKESRRL--VGTQGRRNLTAECTGCECV 253 (253)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 253 (253)
+++...+...+..++.. ...+.....+ ...+.++.|+.|+.+||+|
T Consensus 3 ~r~~~lL~~~fr~L~~~---l~~~~~~~~ls~~d~~rL~~ya~g~~~y~~v 50 (101)
T PF13725_consen 3 RRFPSLLSDSFRDLEPE---LLKSELDQSLSPIDLQRLERYARGGRDYESV 50 (101)
T ss_dssp HHHHHHHHHHTS--S------S---------HHHHHHHHHHHHS---TCCC
T ss_pred chHHHHhCcHhhhCccc---cccccccccCCHHHHHHHHHHHcCCCCHHHH
Confidence 34445555555566633 1111111122 3335789999999999986
No 149
>PRK09318 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=40.40 E-value=54 Score=28.65 Aligned_cols=29 Identities=14% Similarity=0.110 Sum_probs=18.8
Q ss_pred CccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 134 TCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 134 g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
|++++.|.+ +|+.-+.-.+.+|.+++++.
T Consensus 327 GV~~irLLT--Nnp~K~~~L~~~GieV~~~v 355 (387)
T PRK09318 327 GIEKVRLLT--NNPRKTKALEKYGIEVVETV 355 (387)
T ss_pred CCCEEEECC--CCHHHHHHHHhCCCEEEEEe
Confidence 677765544 46655666677888877654
No 150
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=40.18 E-value=24 Score=25.32 Aligned_cols=28 Identities=14% Similarity=0.102 Sum_probs=19.0
Q ss_pred ccEEEEEEEecCHHHHHHHHhCCCEEEEE
Q 025384 135 CRALYLHVISYNIPAIHLYKKMSFKCVRR 163 (253)
Q Consensus 135 ~~~i~l~v~~~N~~a~~fy~k~GF~~~~~ 163 (253)
+..+.+.|. +-.++++||+++||+....
T Consensus 4 i~Hi~i~v~-Dl~~s~~FY~~LG~~~~~~ 31 (142)
T cd08353 4 MDNVGIVVR-DLEAAIAFFLELGLELEGR 31 (142)
T ss_pred eeeEEEEeC-CHHHHHHHHHHcCCEEccc
Confidence 344545444 3347899999999987543
No 151
>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=39.50 E-value=24 Score=24.57 Aligned_cols=16 Identities=13% Similarity=0.281 Sum_probs=13.8
Q ss_pred HHHHHHHHhCCCEEEE
Q 025384 147 IPAIHLYKKMSFKCVR 162 (253)
Q Consensus 147 ~~a~~fy~k~GF~~~~ 162 (253)
.+|+.||+.+||+...
T Consensus 12 ~~s~~FY~~lGf~~~~ 27 (124)
T cd09012 12 EKSTAFYTALGFEFNP 27 (124)
T ss_pred HHHHHHHHHCCCEEcc
Confidence 4799999999999764
No 152
>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins. BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.
Probab=39.48 E-value=40 Score=23.29 Aligned_cols=22 Identities=18% Similarity=0.375 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCEEEEEEc-ceE
Q 025384 147 IPAIHLYKKMSFKCVRRLH-GFY 168 (253)
Q Consensus 147 ~~a~~fy~k~GF~~~~~~~-~~~ 168 (253)
.+|++||+++||+...... .+.
T Consensus 14 ~~s~~FY~~lG~~~~~~~~~~~~ 36 (120)
T cd08350 14 DATEAFYARLGFSVGYRQAAGYM 36 (120)
T ss_pred HHHHHHHHHcCCEEEecCCCCEE
Confidence 4799999999999876655 344
No 153
>PHA00771 head assembly protein
Probab=39.37 E-value=93 Score=22.44 Aligned_cols=69 Identities=9% Similarity=0.065 Sum_probs=46.5
Q ss_pred EccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcceEEeCCeeeeeEEEE
Q 025384 108 VVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFV 181 (253)
Q Consensus 108 V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~~~~~~g~~~d~~~~~ 181 (253)
-+|++||.-- ..-....+|.-+...+..+.-.+...-+-.+-..+=+|.+.+|..++++ .++ .|..+|.
T Consensus 69 y~P~fRG~ya--~~~r~F~kwlL~Nt~f~~vit~vp~kt~~G~vic~lig~rRVG~id~a~-~g~--~~vT~Yq 137 (151)
T PHA00771 69 YLPEIRGFSK--EIGLAFWRYILTNTTVQCVTSFAARKFRHGQMYCAMIGLKRVGTIKKYF-KGV--DDVTFYS 137 (151)
T ss_pred eCccccchhH--HHHHHHHHHHhcCCceeEEEEecccccccchhhhhhhCCceeeeHHHHh-cCC--CceEEEE
Confidence 3999998743 4545555666555566666665655555556666778999999999998 344 5655554
No 154
>TIGR00505 ribA GTP cyclohydrolase II. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal. The function of archaeal members of the family has not been demonstrated and is assigned tentatively.
Probab=38.88 E-value=75 Score=24.68 Aligned_cols=46 Identities=17% Similarity=0.325 Sum_probs=33.0
Q ss_pred ccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 109 VDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 109 ~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
.+++|.-|+|.++|..+ |++.+.|.+. |+.-+.-...+|-++++..
T Consensus 121 ~~d~R~yGiGAQIL~dL--------GV~~~rLLtn--~~~k~~~L~g~gleVv~~~ 166 (191)
T TIGR00505 121 PADERDFSLCADILEDL--------GVKKVRLLTN--NPKKIEILKKAGINIVERV 166 (191)
T ss_pred cccceehhHHHHHHHHc--------CCCEEEECCC--CHHHHHHHHhCCCEEEEEe
Confidence 45689999999998766 9999876655 5444555567777776644
No 155
>PRK00393 ribA GTP cyclohydrolase II; Reviewed
Probab=38.66 E-value=67 Score=25.12 Aligned_cols=47 Identities=13% Similarity=0.231 Sum_probs=33.4
Q ss_pred EccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 108 VVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 108 V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
..+++|.-|+|.++|+.+ |++.+.|.+. |+.-+.-...+|.++++..
T Consensus 123 ~~~d~R~yGiGAQIL~dL--------GV~~mrLLtn--~~~k~~~L~g~GleV~~~~ 169 (197)
T PRK00393 123 FAADERDYTLAADMLKAL--------GVKKVRLLTN--NPKKVEALTEAGINIVERV 169 (197)
T ss_pred CCccceehhHHHHHHHHc--------CCCEEEECCC--CHHHHHHHHhCCCEEEEEe
Confidence 355699999999998765 9999876555 5444444557777777644
No 156
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=36.84 E-value=2.9e+02 Score=24.26 Aligned_cols=139 Identities=13% Similarity=0.071 Sum_probs=0.0
Q ss_pred CHHHHHHHHHcc-CCCCCcHHHHHHhh--cccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccccCCCCC
Q 025384 21 DLMILQQLHADA-FPIRYESEFFQNVV--NARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSYDSAKSD 97 (253)
Q Consensus 21 D~~~l~~l~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (253)
+.++..++..+. ...-.....+..+. .+.....+...+ ++++++|.+.+.... .
T Consensus 2 t~~e~d~f~~~~~~~~flQs~~wa~vk~~~gw~~~~vgv~~------d~~~v~aa~ll~~~~-----------------~ 58 (406)
T PF02388_consen 2 TAEEFDAFVENHPQGNFLQSSEWAEVKEKRGWEVERVGVKD------DGGEVAAAALLLRKK-----------------P 58 (406)
T ss_dssp -HHHHHHHHHCSTT--CCCSHHHHHHCHHTTSEEEEEEEE-------TTS-EEEEEEEEEEE-----------------C
T ss_pred CHHHHHHHHHhCCCCCcchHHHHHHHHHHCCCeEEEEEEEe------CCCeEEEEEEEEEec-----------------c
Q ss_pred CcEEEEEEEEEcc--CccccCHHHHHHHHHHHHHhcCCCccEEEEEE---------------EecCHHHHHHHHhCCCEE
Q 025384 98 QTLVYILTLGVVD--TYRNLGIASSLISEVIKYASNIPTCRALYLHV---------------ISYNIPAIHLYKKMSFKC 160 (253)
Q Consensus 98 ~~~~~i~~l~V~~--~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v---------------~~~N~~a~~fy~k~GF~~ 160 (253)
.....+..+-=.| +|...-+-..++..+.+++++. ++-.+.++. ...|...+..++++||..
T Consensus 59 ~~g~~~~yiprGPv~d~~d~ell~~f~~~Lk~~akk~-~a~~lridP~~~~~~~~~~g~~~~~~~~~~~~~~l~~~G~~~ 137 (406)
T PF02388_consen 59 FKGFKYAYIPRGPVMDYSDEELLEFFLEELKKYAKKK-RALFLRIDPNVIYQERDEDGEPIEGEENDELIENLKALGFRH 137 (406)
T ss_dssp TTTCEEEEETT--EC-TT-HHHHHHHHHHHHHHHCTT-TEEEEEE--S-EEECE-TTS-EEEE-S-THHHHHHHHTT-CC
T ss_pred CCceeEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC-CEEEEEEeCchhhhhcccccccccCcchHHHHHHHHhcCcee
Q ss_pred EEEEcceEEeCCeeeeeEEEEEEecC
Q 025384 161 VRRLHGFYLINGQHYDSYLFVYYING 186 (253)
Q Consensus 161 ~~~~~~~~~~~g~~~d~~~~~~~l~~ 186 (253)
.+....+. +.....+.|.++|.+
T Consensus 138 ~g~~~~~~---~~~qpr~~~v~dL~~ 160 (406)
T PF02388_consen 138 QGFTKGYD---DTIQPRWTYVKDLTG 160 (406)
T ss_dssp TS-SSSTT---SSSS-SEEEEEEGCC
T ss_pred cCcccCCC---cccCccEEEEEECCC
No 157
>PRK09319 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional
Probab=36.33 E-value=65 Score=29.53 Aligned_cols=30 Identities=20% Similarity=0.123 Sum_probs=23.2
Q ss_pred CccEEEEEEEecCHHHHHHHHhCCCEEEEEEc
Q 025384 134 TCRALYLHVISYNIPAIHLYKKMSFKCVRRLH 165 (253)
Q Consensus 134 g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~ 165 (253)
|+++|.|.+ +|+.-+.-.+.+|.+++++.+
T Consensus 350 GI~kIrLLT--NNP~Ki~~L~~~GIeVv~rvp 379 (555)
T PRK09319 350 GIKRLRLIT--NNPRKIAGLGGYGLEVVDRVP 379 (555)
T ss_pred CCCEEEECC--CCHHHHHHHHhCCCEEEEEec
Confidence 888876655 477777778899999988775
No 158
>PRK00756 acyltransferase NodA; Provisional
Probab=34.91 E-value=2.1e+02 Score=21.89 Aligned_cols=90 Identities=18% Similarity=0.140 Sum_probs=51.8
Q ss_pred EEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHH-HHHHHHhCCCEE-------EEEEcceEE--
Q 025384 100 LVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIP-AIHLYKKMSFKC-------VRRLHGFYL-- 169 (253)
Q Consensus 100 ~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~-a~~fy~k~GF~~-------~~~~~~~~~-- 169 (253)
.+.+.-.+|.|+..|.||+..+ ..+.-.+.+. |+..-+-.|...-.. ..+|. +.|..- -.+.++.+.
T Consensus 85 VaElGLygVRpDLEGlGi~~S~-r~m~PvLq~L-gVPF~FGtVR~al~~Hv~R~~-r~g~~ti~~gvrVRSTl~~v~~dl 161 (196)
T PRK00756 85 VAELGLYGVRPDLEGLGIAHSI-RAMYPVLQEL-GVPFAFGTVRHALRNHVERLC-RNGLATIVTGVRVRSTLPDVYLDL 161 (196)
T ss_pred EEEeeeeeeccccccccchhhH-HHHHHHHHhc-CCCeecccchHHHHHHHHHHh-ccCcceecccceeeccCccccCCC
Confidence 4556677899999999999877 4555555555 666655555432211 12232 555532 233444443
Q ss_pred eCCeeeeeEEEEEEecCCCCCCC
Q 025384 170 INGQHYDSYLFVYYINGGRSPCS 192 (253)
Q Consensus 170 ~~g~~~d~~~~~~~l~~~~~~~~ 192 (253)
..-+..|.+.++..+...-+.|.
T Consensus 162 pptr~ed~lv~V~Pi~r~~seWP 184 (196)
T PRK00756 162 PPTRTEDVLVVVFPIGRPMSEWP 184 (196)
T ss_pred CCccccccEEEEEeCCCccccCC
Confidence 22344677888887765544443
No 159
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=34.88 E-value=73 Score=25.78 Aligned_cols=42 Identities=14% Similarity=0.145 Sum_probs=30.9
Q ss_pred HHHHHHHHhcCCCccEEEEEEE---ecCHHHHHHHHhCCCEEEEEE
Q 025384 122 ISEVIKYASNIPTCRALYLHVI---SYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 122 l~~~~~~a~~~~g~~~i~l~v~---~~N~~a~~fy~k~GF~~~~~~ 164 (253)
..++++-++.. |+++|.+.+. .-|.....||++.||++....
T Consensus 108 ~~A~~~AL~al-g~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~ 152 (239)
T TIGR02990 108 SSAAVDGLAAL-GVRRISLLTPYTPETSRPMAQYFAVRGFEIVNFT 152 (239)
T ss_pred HHHHHHHHHHc-CCCEEEEECCCcHHHHHHHHHHHHhCCcEEeeee
Confidence 34445555555 9999988753 447888999999999997753
No 160
>PF02100 ODC_AZ: Ornithine decarboxylase antizyme; InterPro: IPR002993 Ornithine decarboxylase antizyme (ODC-AZ) [] binds to, and destabilises, ornithine decarboxylase (ODC), a key enzyme in polyamine synthesis. ODC is then rapidly degraded. The expression of ODC-AZ requires programmed, ribosomal frameshifting which is modulated according to the cellular concentration of polyamines. High levels of polyamines induce a +1 ribosomal frameshift in the translation of mRNA for the antizyme leading to the expression of a full-length protein. At least two forms of ODC-AZ exist in mammals [] and the protein has been found in Drosophila (protein Gutfeeling).; GO: 0004857 enzyme inhibitor activity, 0008073 ornithine decarboxylase inhibitor activity; PDB: 1ZO0_A.
Probab=34.08 E-value=54 Score=22.90 Aligned_cols=55 Identities=11% Similarity=0.148 Sum_probs=25.0
Q ss_pred EccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHH---HhCCCEEEEE
Q 025384 108 VVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLY---KKMSFKCVRR 163 (253)
Q Consensus 108 V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy---~k~GF~~~~~ 163 (253)
+.+...++| -+.-+-++++.|.+.+++..+.+.+..+......+- .=.||+.+..
T Consensus 30 ip~~~~~~~-~K~~lvaLLElAee~L~c~~vvic~~k~~~d~~~Llr~l~~vGF~lv~~ 87 (108)
T PF02100_consen 30 IPSSALGQG-SKESLVALLELAEEKLGCSHVVICLDKNRPDRASLLRTLMWVGFELVTP 87 (108)
T ss_dssp -SS---SS---SHHHHHHHHHHHHHH----EEEEE---SS-HHHHHHHHTTT--EEE--
T ss_pred ECCcccccc-cHHHHHHHHHHhcCcCCCCEEEEEEECCchhHHHhhhhcEeeccEecCC
Confidence 344444444 456667788888876799999999987765544444 4468887653
No 161
>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A ....
Probab=33.00 E-value=77 Score=21.04 Aligned_cols=23 Identities=17% Similarity=0.236 Sum_probs=18.2
Q ss_pred HHHHHHHHh-CCCEEEEEEcceEE
Q 025384 147 IPAIHLYKK-MSFKCVRRLHGFYL 169 (253)
Q Consensus 147 ~~a~~fy~k-~GF~~~~~~~~~~~ 169 (253)
..+.+||++ +||+.......+..
T Consensus 7 ~~a~~FY~~~lg~~~~~~~~~~~~ 30 (108)
T PF12681_consen 7 EAAAAFYEDVLGFEVVFDDPDYVD 30 (108)
T ss_dssp HHHHHHHHHTTTSEEEEEETSEEE
T ss_pred HHHHHHHHHhcCCEEEEeCCCeEE
Confidence 478999998 99999886665553
No 162
>PRK14019 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional
Probab=31.78 E-value=75 Score=27.60 Aligned_cols=28 Identities=4% Similarity=-0.028 Sum_probs=20.3
Q ss_pred CccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 134 TCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 134 g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
|++.|.|.+ |+.-+.-.+.+|.+++++.
T Consensus 335 gv~~irLlT---np~K~~~L~~~Gi~V~~~~ 362 (367)
T PRK14019 335 GVGKMRLLS---SPRKFPSMSGFGLEVTGYV 362 (367)
T ss_pred CCCeEEECC---CcHHHHhhhhCCcEEEEEe
Confidence 888888876 4555555678888887655
No 163
>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS). HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su
Probab=31.45 E-value=84 Score=22.37 Aligned_cols=27 Identities=11% Similarity=0.090 Sum_probs=19.1
Q ss_pred EEEEEEecCHHHHHHHHh-CCCEEEEEEc
Q 025384 138 LYLHVISYNIPAIHLYKK-MSFKCVRRLH 165 (253)
Q Consensus 138 i~l~v~~~N~~a~~fy~k-~GF~~~~~~~ 165 (253)
+.+.| .+=.++++||++ +||+......
T Consensus 4 i~i~V-~D~e~s~~FY~~vLGf~~~~~~~ 31 (136)
T cd08342 4 VEFYV-GNAKQLASWFSTKLGFEPVAYHG 31 (136)
T ss_pred EEEEe-CCHHHHHHHHHHhcCCeEEEecC
Confidence 44444 334578999999 9999876554
No 164
>PRK08815 GTP cyclohydrolase; Provisional
Probab=31.28 E-value=90 Score=27.19 Aligned_cols=29 Identities=10% Similarity=0.049 Sum_probs=17.6
Q ss_pred CccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 134 TCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 134 g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
|++++.|.+. |+.-+.-.+.+|.++++..
T Consensus 312 GV~kirLLTn--np~K~~~L~g~gieVv~~v 340 (375)
T PRK08815 312 GITRVRLLTN--NPTKAERLRAAGIEVEDRI 340 (375)
T ss_pred CCCeEEECCC--CHHHHHHHHhCCCEEEEEe
Confidence 7777665544 5444455567777776644
No 165
>PLN02831 Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase
Probab=31.01 E-value=87 Score=28.03 Aligned_cols=29 Identities=21% Similarity=0.158 Sum_probs=18.5
Q ss_pred CccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 134 TCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 134 g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
|+++|.|.+. |+.=+.-.+.+|.+++++.
T Consensus 380 GI~~irLLTN--Np~K~~~L~~~GieVve~v 408 (450)
T PLN02831 380 GVRTMRLMTN--NPAKYTGLKGYGLAVVGRV 408 (450)
T ss_pred CCCEEEECCC--CHHHHHHHhhCCCEEEEEe
Confidence 7777655443 6555566677787776654
No 166
>PRK09311 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=30.41 E-value=94 Score=27.38 Aligned_cols=29 Identities=17% Similarity=0.177 Sum_probs=17.2
Q ss_pred CccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 134 TCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 134 g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
|+++|.|.+ +|+.=+.-.+.+|.+++++.
T Consensus 346 Gv~~irLLT--nnp~K~~~L~~~GieV~~~v 374 (402)
T PRK09311 346 GVRSMRLLT--NNPRKIAGLQGYGLHVTERV 374 (402)
T ss_pred CCCEEEECC--CCHHHHHHHhhCCCEEEEEe
Confidence 666665544 35544555567777776544
No 167
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=29.99 E-value=1.9e+02 Score=19.87 Aligned_cols=49 Identities=14% Similarity=0.238 Sum_probs=36.9
Q ss_pred CcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHH
Q 025384 98 QTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLY 153 (253)
Q Consensus 98 ~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy 153 (253)
....++..++|.+.-++.|++-.+.+.+.+. ...+...+.++|+ ..++|
T Consensus 31 ~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d------~~~L~Wrsr~~n~-~n~Wy 79 (98)
T cd03173 31 NSIPYLDKFAVSDHLWLNNVTDNIFNLIRKD------FPSLLWRVRENDA-NLKWY 79 (98)
T ss_pred CCCEEEEEEEEcccccccCHHHHHHHHHHhh------CCeeEEEeCCCCC-ccceE
Confidence 3567899999999999999999999988863 3466666666664 33443
No 168
>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=28.49 E-value=66 Score=23.12 Aligned_cols=20 Identities=20% Similarity=0.446 Sum_probs=15.0
Q ss_pred cCHHHHHHHHh-CCCEEEEEE
Q 025384 145 YNIPAIHLYKK-MSFKCVRRL 164 (253)
Q Consensus 145 ~N~~a~~fy~k-~GF~~~~~~ 164 (253)
+-.+|++||++ +||+..++.
T Consensus 12 DlerSi~FY~~vLG~~~~~~~ 32 (127)
T cd08358 12 NRNKTIKFYREVLGMKVLRHE 32 (127)
T ss_pred CHHHHHHHHHHhcCCEEEeee
Confidence 34589999954 899986644
No 169
>PF13862 BCIP: p21-C-terminal region-binding protein
Probab=27.76 E-value=2.9e+02 Score=21.47 Aligned_cols=62 Identities=13% Similarity=0.164 Sum_probs=37.6
Q ss_pred ceEEEeCCCCCHHHHHHHHHccCCC-CCcHHHHHHhhcccce-eeeeeeecCCCCCCCCceEEEEEEE
Q 025384 11 TICYRPIRPSDLMILQQLHADAFPI-RYESEFFQNVVNARDI-VSWGAVDRSRPNGHSDELIGFVTAR 76 (253)
Q Consensus 11 ~i~ir~~~~~D~~~l~~l~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivG~~~~~ 76 (253)
++.+....+.|...+..+..+.|.. .+....+...+-.+.. -..+-.. +++++.+.|++++.
T Consensus 6 dFe~~dp~~~D~hgIk~LL~ql~~~~~~dl~~LadlIi~Q~~vGsvVK~~----d~~e~dvyg~~Svl 69 (194)
T PF13862_consen 6 DFEFFDPNEIDFHGIKNLLQQLFLDAEIDLSELADLIIEQNNVGSVVKQA----DGDEDDVYGFLSVL 69 (194)
T ss_pred EEEeeCCChhhHHHHHHHHHHhccccCcCHHHHHHHHHcCCCCceEEEec----CCCCCcceEEEEEE
Confidence 3567788889999999999999876 3444444444433322 2222210 22356677776664
No 170
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=27.65 E-value=76 Score=25.69 Aligned_cols=45 Identities=20% Similarity=0.338 Sum_probs=37.8
Q ss_pred EEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEec
Q 025384 101 VYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISY 145 (253)
Q Consensus 101 ~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~ 145 (253)
.|....-+-|.|--+|++++.|++..+|+....|-+.|++...+.
T Consensus 144 tYlgs~r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISA 188 (259)
T COG0623 144 TYLGSERVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISA 188 (259)
T ss_pred EeccceeecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecc
Confidence 455566789999999999999999999988888988888876654
No 171
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=27.53 E-value=86 Score=22.02 Aligned_cols=43 Identities=12% Similarity=0.234 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEE
Q 025384 119 SSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVR 162 (253)
Q Consensus 119 s~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~ 162 (253)
...+..+++.+.+. |++.+.+.....+..++.+.++.|.+.+|
T Consensus 65 ~~~~~~~v~~~~~~-g~~~v~~~~g~~~~~~~~~a~~~gi~vig 107 (116)
T PF13380_consen 65 PDKVPEIVDEAAAL-GVKAVWLQPGAESEELIEAAREAGIRVIG 107 (116)
T ss_dssp HHHHHHHHHHHHHH-T-SEEEE-TTS--HHHHHHHHHTT-EEEE
T ss_pred HHHHHHHHHHHHHc-CCCEEEEEcchHHHHHHHHHHHcCCEEEe
Confidence 34455666667777 89999999999999999999999999876
No 172
>PRK12485 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional
Probab=27.17 E-value=1.1e+02 Score=26.50 Aligned_cols=29 Identities=7% Similarity=-0.140 Sum_probs=20.0
Q ss_pred CccEEEEEEEecCHHHHHHHHhCCCEEEEEEc
Q 025384 134 TCRALYLHVISYNIPAIHLYKKMSFKCVRRLH 165 (253)
Q Consensus 134 g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~ 165 (253)
|+++|.|. +|+.-+.-.+..|.+++++.+
T Consensus 338 GV~kirLL---nNP~K~~~L~~~GIeV~~~vp 366 (369)
T PRK12485 338 GVGKLRHL---GPPLKYAGLTGYDLEVVESIP 366 (369)
T ss_pred CCCEEEEC---CCchhhhhhhhCCcEEEEEec
Confidence 88888887 355555556777888776553
No 173
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=25.96 E-value=2.2e+02 Score=23.60 Aligned_cols=69 Identities=9% Similarity=0.160 Sum_probs=43.7
Q ss_pred CCcEEEEEEEEEccCccccC--HHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEcc
Q 025384 97 DQTLVYILTLGVVDTYRNLG--IASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLHG 166 (253)
Q Consensus 97 ~~~~~~i~~l~V~~~~rg~G--iGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~~ 166 (253)
+++..++.++.-++++-..| +-.+.+..=+..+++. |+..|+++-.+..+.-..+..++|+-+....+.
T Consensus 11 NGk~~~l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~~-G~N~iR~~h~p~~~~~~~~cD~~GilV~~e~~~ 81 (298)
T PF02836_consen 11 NGKPIFLRGVNRHQDYPGLGRAMPDEAMERDLELMKEM-GFNAIRTHHYPPSPRFYDLCDELGILVWQEIPL 81 (298)
T ss_dssp TTEEE-EEEEEE-S-BTTTBT---HHHHHHHHHHHHHT-T-SEEEETTS--SHHHHHHHHHHT-EEEEE-S-
T ss_pred CCEEEEEEEEeeCcCcccccccCCHHHHHHHHHHHHhc-CcceEEcccccCcHHHHHHHhhcCCEEEEeccc
Confidence 45566777877777765554 4456666667778888 999999977777777788889999998776653
No 174
>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.
Probab=25.75 E-value=1e+02 Score=20.98 Aligned_cols=18 Identities=11% Similarity=0.482 Sum_probs=14.3
Q ss_pred HHHHHHHHh-CCCEEEEEE
Q 025384 147 IPAIHLYKK-MSFKCVRRL 164 (253)
Q Consensus 147 ~~a~~fy~k-~GF~~~~~~ 164 (253)
..+..||++ +||+.....
T Consensus 13 ~~a~~FY~~~lG~~~~~~~ 31 (126)
T cd08346 13 QETVDFYTDVLGLRLVKKT 31 (126)
T ss_pred hHhHHHHHHccCCEEeeeE
Confidence 478999986 799986654
No 175
>cd00641 GTP_cyclohydro2 GTP cyclohydrolase II (RibA). GTP cyclohydrolase II catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5' phosphate, formate, pyrophosphate (APy), and GMP in the biosynthetic pathway of riboflavin. Riboflavin is the precursor molecule for the synthesis of the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD) which are essential to cell metabolism. The enzyme is present in plants and numerous pathogenic bacteria, especially gram negative organisms, who are dependent on endogenous synthesis of the vitamin because they lack an appropriate uptake system. For animals and humans, which lack this biosynthetic pathway, riboflavin is the essential vitamin B2. GTP cyclohydrolase II requires magnesium ions for activity and has a bound catalytic zinc. The functionally active form is thought to be a homodimer. A paralogous protein is encoded in the genome of Streptomyces coelicolor, which converts GTP to 2-amino-5-fo
Probab=24.34 E-value=1.7e+02 Score=22.65 Aligned_cols=46 Identities=17% Similarity=0.310 Sum_probs=31.4
Q ss_pred ccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 109 VDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 109 ~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
.+++|.-|+|.++|+.+ |++.+.|.+. |..-..-..-+|-++++..
T Consensus 123 ~~d~R~yGiGAQIL~dL--------Gv~~mrLLs~--~~~k~~~L~gfglevv~~~ 168 (193)
T cd00641 123 PADARDYGLAAQILRDL--------GIKSVRLLTN--NPDKIDALEGYGIEVVERV 168 (193)
T ss_pred CccccchHHHHHHHHHc--------CCCeEEECCC--CHHHHHHHHhCCCEEEEEe
Confidence 45689999999998765 8888887766 3333333445666666543
No 176
>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge
Probab=24.34 E-value=1.9e+02 Score=19.57 Aligned_cols=34 Identities=21% Similarity=0.243 Sum_probs=22.0
Q ss_pred CccEEEEEEEecCHHHHHHHHh-CCCEEEEEEcceE
Q 025384 134 TCRALYLHVISYNIPAIHLYKK-MSFKCVRRLHGFY 168 (253)
Q Consensus 134 g~~~i~l~v~~~N~~a~~fy~k-~GF~~~~~~~~~~ 168 (253)
++..+.+.+.. =..+++||++ +||+......++.
T Consensus 3 ~i~hv~l~v~d-~~~s~~FY~~~lG~~~~~~~~~~~ 37 (120)
T cd08362 3 ALRGVGLGVPD-LAAAAAFYREVWGLSVVAEDDGIV 37 (120)
T ss_pred eeeEEEEecCC-HHHHHHHHHhCcCcEEEEecCCEE
Confidence 34455555532 3479999998 8999876554443
No 177
>COG0375 HybF Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) [General function prediction only]
Probab=24.33 E-value=2.1e+02 Score=20.26 Aligned_cols=38 Identities=16% Similarity=0.256 Sum_probs=27.8
Q ss_pred cCHHHHHHHHHHHHHhcCCCccE---EEEEEE---ecCHHHHHHH
Q 025384 115 LGIASSLISEVIKYASNIPTCRA---LYLHVI---SYNIPAIHLY 153 (253)
Q Consensus 115 ~GiGs~Ll~~~~~~a~~~~g~~~---i~l~v~---~~N~~a~~fy 153 (253)
..++.++++.++++|.+. |+.+ |.+.+. .-|+.+.+|-
T Consensus 4 ~Sla~aii~~i~~~A~~~-~a~~V~~V~l~IG~ls~v~~~~l~Fa 47 (115)
T COG0375 4 LSLAQAIIELIEEQAEKH-GAKRVTAVWLEIGELSCVEPEALRFA 47 (115)
T ss_pred HHHHHHHHHHHHHHHHHc-CCceEEEEEEEEcceeccCHHHHHHH
Confidence 357889999999999999 8754 444443 2477787774
No 178
>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase. This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.
Probab=24.06 E-value=86 Score=21.35 Aligned_cols=27 Identities=7% Similarity=0.016 Sum_probs=17.9
Q ss_pred EEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 137 ALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 137 ~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
.+.+.|.. =.++.+||+.+||+.....
T Consensus 6 hv~l~v~D-l~~s~~FY~~lGl~~~~~~ 32 (113)
T cd07267 6 HVRFEHPD-LDKAERFLTDFGLEVAART 32 (113)
T ss_pred EEEEccCC-HHHHHHHHHHcCCEEEEec
Confidence 34444432 2478999999999876543
No 179
>PRK10150 beta-D-glucuronidase; Provisional
Probab=23.82 E-value=3.4e+02 Score=25.27 Aligned_cols=68 Identities=10% Similarity=0.093 Sum_probs=50.7
Q ss_pred CCcEEEEEEEEEccCcccc--CHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEEEEEc
Q 025384 97 DQTLVYILTLGVVDTYRNL--GIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCVRRLH 165 (253)
Q Consensus 97 ~~~~~~i~~l~V~~~~rg~--GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~ 165 (253)
++..+++.++..|++.-.. ++..+.+..-++.+++. |+..|++.-.+..+....+..++|+-+..+.+
T Consensus 288 NG~pv~lrG~~~h~~~~~~G~a~~~~~~~~d~~l~K~~-G~N~vR~sh~p~~~~~~~~cD~~GllV~~E~p 357 (604)
T PRK10150 288 NGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWI-GANSFRTSHYPYSEEMLDLADRHGIVVIDETP 357 (604)
T ss_pred CCEEEEEEeeeccCCCCccCCcCCHHHHHHHHHHHHHC-CCCEEEeccCCCCHHHHHHHHhcCcEEEEecc
Confidence 4567778888777775444 44556666667788887 99999997666667778888999999877665
No 180
>PF03376 Adeno_E3B: Adenovirus E3B protein; InterPro: IPR005041 Adenoviruses are medium-sized, non-enveloped viruses containing double-stranded DNA. They can cause a variety of diseases including pneumonia, cystitis, conjunctivitis and diarrhoea, all of which can be fatal to patients who are immunocompromised []. These viruses have many mechanisms to evade the host immune response, including several proteins which are expressed as part of the early transcription unit 3 (E3) []. One of the regions of E3, known as the E3B region, encodes three proteins known as 10.4K, 14.5K and 14.7K. Two of these proteins, 10.4K and 14.5K, form the RID complex (receptor internalisation and degradation) which protects the infected cell from host-induced lysis by clearing the the TNF and Fas receptors from the cell surface []. Other receptors, such as the epidermal growth factor receptor, are also known to be cleared by RID []. This entry represents the E3B region 10.4K protein, also known as the RID alpha subunit.; GO: 0016020 membrane
Probab=23.73 E-value=37 Score=21.15 Aligned_cols=13 Identities=46% Similarity=0.524 Sum_probs=10.9
Q ss_pred ccCccccCHHHHH
Q 025384 109 VDTYRNLGIASSL 121 (253)
Q Consensus 109 ~~~~rg~GiGs~L 121 (253)
+|+||++.|++.|
T Consensus 53 hPqYrn~~iA~LL 65 (67)
T PF03376_consen 53 HPQYRNQQIAALL 65 (67)
T ss_pred CchhcCHHHHHHh
Confidence 7999999888765
No 181
>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein.; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....
Probab=23.72 E-value=99 Score=20.99 Aligned_cols=29 Identities=21% Similarity=0.375 Sum_probs=19.8
Q ss_pred cEEEEEEEecCHHHHHHHHh-CCCEEEEEEc
Q 025384 136 RALYLHVISYNIPAIHLYKK-MSFKCVRRLH 165 (253)
Q Consensus 136 ~~i~l~v~~~N~~a~~fy~k-~GF~~~~~~~ 165 (253)
..+.+.|... ..++.||++ +||+......
T Consensus 3 ~Hi~i~v~d~-~~~~~FY~~~lG~~~~~~~~ 32 (128)
T PF00903_consen 3 DHIAIRVKDL-EKAIDFYTDVLGFRLVEESD 32 (128)
T ss_dssp EEEEEEESCH-HHHHHHHHHTTTSEEEEEEE
T ss_pred EEEEEEcCCH-HHHHHHHHHHhCCcEEeeec
Confidence 3444444433 378999988 8999977655
No 182
>PRK15312 antimicrobial resistance protein Mig-14; Provisional
Probab=23.60 E-value=1.8e+02 Score=24.39 Aligned_cols=50 Identities=20% Similarity=0.140 Sum_probs=32.2
Q ss_pred CCceEEEEEEEEeecCcccccccccccCCCCCCcEEE--EEEEEEccCccccCHHHHHH----HHHHHHHhcC
Q 025384 66 SDELIGFVTARIVQANESEIGDLLSYDSAKSDQTLVY--ILTLGVVDTYRNLGIASSLI----SEVIKYASNI 132 (253)
Q Consensus 66 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~l~V~~~~rg~GiGs~Ll----~~~~~~a~~~ 132 (253)
+|+++++-.+.... ...+++ ....+++|++...-.|+.|+ +.+.+++...
T Consensus 211 ~~~PcA~qlv~k~e-----------------Sp~wi~~D~iNgG~Dpe~~~~spGSIL~WlNi~~A~~~~~~~ 266 (298)
T PRK15312 211 EGIPCAFDIVLKSE-----------------SQMNVYFDVPNGAVKNECMPLSPGSILMWLNISRARHYCQER 266 (298)
T ss_pred CCcceEEEEEEEec-----------------CCCcEEEecccCccCcccccCCCccEEEEecHHHHHHHHHhc
Confidence 89999998776422 122333 23467899999888888763 4455555554
No 183
>COG2384 Predicted SAM-dependent methyltransferase [General function prediction only]
Probab=23.52 E-value=3.6e+02 Score=21.69 Aligned_cols=49 Identities=14% Similarity=0.150 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHHHHhcC-CCccEEEEEEEecCHHHHHHHHhCCCEEEEEE
Q 025384 116 GIASSLISEVIKYASNI-PTCRALYLHVISYNIPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 116 GiGs~Ll~~~~~~a~~~-~g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~ 164 (253)
|.|-.++..+++...+. .+..++.|-....-...+.+..+++|....+.
T Consensus 93 GMGG~lI~~ILee~~~~l~~~~rlILQPn~~~~~LR~~L~~~~~~I~~E~ 142 (226)
T COG2384 93 GMGGTLIREILEEGKEKLKGVERLILQPNIHTYELREWLSANSYEIKAET 142 (226)
T ss_pred CCcHHHHHHHHHHhhhhhcCcceEEECCCCCHHHHHHHHHhCCceeeeee
Confidence 66777777777766655 34556655555555567888899999986643
No 184
>PF03588 Leu_Phe_trans: Leucyl/phenylalanyl-tRNA protein transferase; InterPro: IPR004616 Leucyl/phenylalanyl-tRNA--protein transferase 2.3.2.6 from EC transfers a Leu or Phe to the amino end of certain proteins to enable degradation. The N-terminal residue controls the biological half-life of many proteins via the N-end rule pathway.; GO: 0008914 leucyltransferase activity, 0030163 protein catabolic process; PDB: 2Z3L_A 2Z3O_A 2Z3P_A 2DPT_B 2Z3M_B 2Z3N_B 2DPS_B 2Z3K_B 2CXA_A.
Probab=21.80 E-value=3.7e+02 Score=20.58 Aligned_cols=106 Identities=8% Similarity=0.005 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHccCC---CCCcH-H---HHHHhhcccceeeeeeeecCCCCCCCCceEEEEEEEEeecCcccccccccc
Q 025384 19 PSDLMILQQLHADAFP---IRYES-E---FFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANESEIGDLLSY 91 (253)
Q Consensus 19 ~~D~~~l~~l~~~~~~---~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~ 91 (253)
..+++++.+-+.+.-. ..|-. + .+.+.......+++-+++ ++++||-.+....+
T Consensus 59 n~~F~~Vi~~Ca~~~~~~~~TWI~~~~~~aY~~Lh~~G~aHSvEvw~-------~~~LvGGlyGv~iG------------ 119 (173)
T PF03588_consen 59 NTAFEEVIRACAEPRRGQDGTWITPEMIEAYTELHELGYAHSVEVWQ-------GGELVGGLYGVAIG------------ 119 (173)
T ss_dssp SS-HHHHHHHHHTSS--STGTTS-HHHHHHHHHHHHTTSEEEEEEEE-------TTEEEEEEEEEEET------------
T ss_pred CCCHHHHHHHHccCCCCCCCCCcCHHHHHHHHHHHHcCeeEEEeeec-------CCeeEEeeeCEEEC------------
Confidence 4566666666665542 23432 2 233333445556777776 88999987776421
Q ss_pred cCCCCCCcEEEEEEEEEccCccccCHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHHHHHHHhCCCEEE
Q 025384 92 DSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPTCRALYLHVISYNIPAIHLYKKMSFKCV 161 (253)
Q Consensus 92 ~~~~~~~~~~~i~~l~V~~~~rg~GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~fy~k~GF~~~ 161 (253)
....-.++. .+....++..+-++.++++.. |+.-+-+-+ .|+ ..+++|-+.+
T Consensus 120 -------~~F~GESMF----s~~~~ASKval~~L~~~L~~~-g~~liD~Q~--~~~----hl~slGa~~i 171 (173)
T PF03588_consen 120 -------GVFFGESMF----SRVSNASKVALVALVEHLRQC-GFQLIDCQM--PTP----HLASLGAKEI 171 (173)
T ss_dssp -------TEEEEEEEE----ESSTTHHHHHHHHHHHHHHHT-T--EEEEES----H----HHHHTTEEEE
T ss_pred -------CEEEecccc----ccCCChHHHHHHHHHHHHHHC-CCcEEEecc--CCH----HHHhcCCEeC
Confidence 222222222 134567888899999999998 877655544 332 2355665543
No 185
>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=21.55 E-value=90 Score=21.16 Aligned_cols=18 Identities=11% Similarity=0.106 Sum_probs=14.7
Q ss_pred HHHHHHHHhCCCEEEEEE
Q 025384 147 IPAIHLYKKMSFKCVRRL 164 (253)
Q Consensus 147 ~~a~~fy~k~GF~~~~~~ 164 (253)
.++.+||+.+||+....-
T Consensus 14 ~~s~~FY~~lG~~~~~~~ 31 (112)
T cd08344 14 EVARRFYEAFGLDVREEG 31 (112)
T ss_pred HHHHHHHHHhCCcEEeec
Confidence 478999999999986543
No 186
>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase. This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do
Probab=21.45 E-value=1.1e+02 Score=21.03 Aligned_cols=29 Identities=24% Similarity=0.265 Sum_probs=19.0
Q ss_pred ccEEEEEEEecCHHHHHHHHh-CCCEEEEEE
Q 025384 135 CRALYLHVISYNIPAIHLYKK-MSFKCVRRL 164 (253)
Q Consensus 135 ~~~i~l~v~~~N~~a~~fy~k-~GF~~~~~~ 164 (253)
+..+.+.|.. =.++..||.+ +||+.....
T Consensus 5 l~hv~l~v~D-l~~s~~FY~~~lG~~~~~~~ 34 (122)
T cd07265 5 PGHVQLRVLD-LEEAIKHYREVLGLDEVGRD 34 (122)
T ss_pred EeEEEEEeCC-HHHHHHHHHhccCCEeeeec
Confidence 3344444443 2478999976 999986654
No 187
>PRK13690 hypothetical protein; Provisional
Probab=21.41 E-value=3.1e+02 Score=21.15 Aligned_cols=50 Identities=8% Similarity=0.058 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHHhcCCCccEEEEEEEecCHHH---HHHHHhCCCEEEEEEcc
Q 025384 116 GIASSLISEVIKYASNIPTCRALYLHVISYNIPA---IHLYKKMSFKCVRRLHG 166 (253)
Q Consensus 116 GiGs~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a---~~fy~k~GF~~~~~~~~ 166 (253)
-+|..+++.+.+...+. |+.-..-.|..-|.+. ....++.||+.+...+.
T Consensus 50 eva~~i~~~l~~~~~~~-gi~LA~QcCEHLNRALvvEr~~a~~~~le~V~VvP~ 102 (184)
T PRK13690 50 EVAEAIVEALLEVLKET-GIHLAVQGCEHLNRALVVEREVAEKYGLEIVTVVPV 102 (184)
T ss_pred HHHHHHHHHHHHHhhhc-CcEEEEechhhhHHHHHHhHHHHHHcCCeEEEEecC
Confidence 47999999999999888 8777666677778664 35788999999887654
No 188
>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]
Probab=21.41 E-value=1.2e+02 Score=20.29 Aligned_cols=30 Identities=17% Similarity=0.252 Sum_probs=20.5
Q ss_pred ccEEEEEEEecCHHHHHHHHh-CCCEEEEEEc
Q 025384 135 CRALYLHVISYNIPAIHLYKK-MSFKCVRRLH 165 (253)
Q Consensus 135 ~~~i~l~v~~~N~~a~~fy~k-~GF~~~~~~~ 165 (253)
+..+.+.|.. =..++.||+. +||+......
T Consensus 3 l~hv~l~v~d-l~~s~~FY~~~LG~~~~~~~~ 33 (138)
T COG0346 3 IHHVTLAVPD-LEASIDFYTDVLGLRLVKDTV 33 (138)
T ss_pred eEEEEEeeCC-HhHhHHHHHhhcCCeeeeecc
Confidence 3344455544 3489999987 9999877553
No 189
>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A.
Probab=20.93 E-value=44 Score=24.59 Aligned_cols=31 Identities=16% Similarity=0.175 Sum_probs=21.7
Q ss_pred CccEEEEEEEecCHHHHHHHHhCCCEEEEEEc
Q 025384 134 TCRALYLHVISYNIPAIHLYKKMSFKCVRRLH 165 (253)
Q Consensus 134 g~~~i~l~v~~~N~~a~~fy~k~GF~~~~~~~ 165 (253)
|+..|...+... ..+..+++++||+.+++.+
T Consensus 9 G~dFvEFa~~~~-~~l~~~~~~lGF~~~a~hr 39 (139)
T PF14696_consen 9 GFDFVEFAVPDA-QALAQLFTALGFQPVARHR 39 (139)
T ss_dssp EEEEEEEE-SST-TSCHHHHCCCCEEEECCEC
T ss_pred CeEEEEEecCCH-HHHHHHHHHhCcceEEecC
Confidence 556666655443 4667888999999988763
No 190
>PRK10291 glyoxalase I; Provisional
Probab=20.04 E-value=1.3e+02 Score=21.02 Aligned_cols=18 Identities=22% Similarity=0.447 Sum_probs=14.2
Q ss_pred HHHHHHHHh-CCCEEEEEE
Q 025384 147 IPAIHLYKK-MSFKCVRRL 164 (253)
Q Consensus 147 ~~a~~fy~k-~GF~~~~~~ 164 (253)
..++.||++ +||+.....
T Consensus 8 e~s~~FY~~~LG~~~~~~~ 26 (129)
T PRK10291 8 QRSIDFYTNVLGMKLLRTS 26 (129)
T ss_pred HHHHHHHHhccCCEEEEee
Confidence 479999976 999986643
Done!