BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025386
(253 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356576041|ref|XP_003556143.1| PREDICTED: uncharacterized protein LOC100812551 isoform 1 [Glycine
max]
Length = 252
Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 166/254 (65%), Positives = 196/254 (77%), Gaps = 3/254 (1%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSR-HDMHNYLSQDDDLGELQPLKDT 59
M DG WNRQQ LPS MLKRPR++YD+ PS + S ++MHNY+ ++DD + LKDT
Sbjct: 1 MTDGSWNRQQQPFLPSSAMLKRPRTEYDISPSGLTSGGNEMHNYIGRNDDHTGHRILKDT 60
Query: 60 STIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPD 119
T+GSA+DRYLQSA +SF SGEASA L R V GG+ R ++DP+V G H G D
Sbjct: 61 KTLGSAFDRYLQSAGLTSFNSGEASAIGSVGLERGV-GGLPRHSLTDPAVMG-HPGGGHD 118
Query: 120 LVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVG 179
L + R+ + DQLP DAA+ PG ET+PLPPDASSTLYVEGLP+DST+REVAHIFRPFVG
Sbjct: 119 LARGGRNVNYGDQLPVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVG 178
Query: 180 YKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
Y+EVRLV KESK RGGDPLILCFVDF NPACAATALSALQGY++DE +P+S LRLQFSR
Sbjct: 179 YREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSR 238
Query: 240 NPGPRSVFGARGRR 253
PGPRS G RG+R
Sbjct: 239 FPGPRSGPGPRGKR 252
>gi|388513795|gb|AFK44959.1| unknown [Lotus japonicus]
Length = 239
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/240 (66%), Positives = 186/240 (77%), Gaps = 1/240 (0%)
Query: 14 LPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSA 73
+P GMLKRPRSDYD+P S + S +D++NY+ +DDD + L+DT TIGS YDRYLQS
Sbjct: 1 MPHSGMLKRPRSDYDMPASGLSSGNDINNYIVRDDDRTGPRMLRDTKTIGSTYDRYLQSG 60
Query: 74 QYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQL 133
Q S++TSGEAS G R PGG+ ++D + GRHG GPD+ N R + Q
Sbjct: 61 QLSAYTSGEASTIGGLGYARG-PGGLPGHSLADHAAMGRHGGGGPDIAPNGRGFNYGGQP 119
Query: 134 PFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLR 193
P D+ +RPGHET+PLPPDASSTLYVEGLP+DSTKREVAHIFRPFVGY+EVRLV KESK R
Sbjct: 120 PVDSVSRPGHETVPLPPDASSTLYVEGLPSDSTKREVAHIFRPFVGYREVRLVTKESKHR 179
Query: 194 GGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
GGDPLILCFVDFENPACAATALSALQGY++DE DP+S LRLQFSR PGPRS G RG+R
Sbjct: 180 GGDPLILCFVDFENPACAATALSALQGYKVDELDPESGHLRLQFSRYPGPRSGPGFRGKR 239
>gi|449462154|ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222348 isoform 1 [Cucumis
sativus]
gi|449462156|ref|XP_004148807.1| PREDICTED: uncharacterized protein LOC101222348 isoform 2 [Cucumis
sativus]
Length = 257
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/262 (63%), Positives = 192/262 (73%), Gaps = 14/262 (5%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTS 60
MAD YWNRQQ LLPS MLKRPR+DY+LP S + + HDMHNYL+ DD G + +KDT
Sbjct: 1 MADDYWNRQQP-LLPSPAMLKRPRTDYELPASGLSTGHDMHNYLTSDDRGGP-RSVKDTQ 58
Query: 61 TIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVS---------DPSVTG 111
TIGSAYDRYLQS Q SSFTSGE + R V R+PV DP V
Sbjct: 59 TIGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPV---ANRMPVGNRMPGPLLPDPIVMS 115
Query: 112 RHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVA 171
R A PDL N R+ + LP D+ +RPG ET+PLPPDAS+TLYVEGLP DS++REVA
Sbjct: 116 RPPAVSPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA 175
Query: 172 HIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSK 231
HIFRPFVGYKE+RLV KESK RGGDPLILCFVDF NPACAATA+SALQGY+MDE DP+S
Sbjct: 176 HIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESN 235
Query: 232 FLRLQFSRNPGPRSVFGARGRR 253
+LRLQFSR+PGPRS G+ G+R
Sbjct: 236 YLRLQFSRHPGPRSGSGSGGKR 257
>gi|388500704|gb|AFK38418.1| unknown [Medicago truncatula]
Length = 252
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/259 (63%), Positives = 192/259 (74%), Gaps = 13/259 (5%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTS 60
MADG+WNRQQ L P GGMLKRPR++YD PS V S +++HNY++Q++ Q L DT
Sbjct: 1 MADGFWNRQQQHLPPPGGMLKRPRTEYDTAPSGVTSGNEVHNYIAQNNGH---QMLNDTK 57
Query: 61 TIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLP---VSDPSVTGRHGATG 117
+GSAYDR+LQSA +SF SGEAS G R GV LP + DPS G G
Sbjct: 58 ILGSAYDRFLQSAGLTSFNSGEASVIGGVGFAR----GVGELPGHSLGDPSAMGHLSGVG 113
Query: 118 --PDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFR 175
PDL +N R ++ QLP DA +RPG ET+PLP DASSTLYVEGLP+DSTKREVAHIFR
Sbjct: 114 GGPDLSRNGRDANFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFR 173
Query: 176 PFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRL 235
PFVGY+EVRLV KESK RGGDPLILCFVDF NPACAATALSALQGY++DE +P+S +LRL
Sbjct: 174 PFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDEINPESSYLRL 233
Query: 236 QFSRNPGPRSVF-GARGRR 253
QFSR+PG RS G RG+R
Sbjct: 234 QFSRSPGRRSGGPGPRGKR 252
>gi|357443729|ref|XP_003592142.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355481190|gb|AES62393.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 252
Score = 306 bits (785), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 164/259 (63%), Positives = 191/259 (73%), Gaps = 13/259 (5%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTS 60
MADG+WNRQQ L P GGMLKRPR++YD PS V S +++HNY++Q++ Q L DT
Sbjct: 1 MADGFWNRQQQHLPPPGGMLKRPRTEYDTAPSGVTSGNEVHNYIAQNNGH---QMLNDTK 57
Query: 61 TIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLP---VSDPSVTGRHGATG 117
+GSAYDR+LQSA +SF SGEAS G R GV LP + DPS G G
Sbjct: 58 ILGSAYDRFLQSAGLTSFNSGEASVIGGVGFAR----GVGELPGHSLGDPSAMGHLSGVG 113
Query: 118 --PDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFR 175
PDL +N R + QLP DA +RPG ET+PLP DASSTLYVEGLP+DSTKREVAHIFR
Sbjct: 114 GGPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFR 173
Query: 176 PFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRL 235
PFVGY+EVRLV KESK RGGDPLILCFVDF NPACAATALSALQGY++DE +P+S +LRL
Sbjct: 174 PFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDEINPESSYLRL 233
Query: 236 QFSRNPGPRSVF-GARGRR 253
QFSR+PG RS G RG+R
Sbjct: 234 QFSRSPGRRSGGPGPRGKR 252
>gi|356576043|ref|XP_003556144.1| PREDICTED: uncharacterized protein LOC100812551 isoform 2 [Glycine
max]
Length = 244
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/254 (64%), Positives = 191/254 (75%), Gaps = 11/254 (4%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTS 60
M DG WNRQQ LPS MLKRPR++Y ++MHNY+ ++DD + LKDT
Sbjct: 1 MTDGSWNRQQQPFLPSSAMLKRPRTEY--------GGNEMHNYIGRNDDHTGHRILKDTK 52
Query: 61 TIGSAYDRYLQSA-QYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPD 119
T+GSA+DRYLQSA Q +SF SGEASA L R V GG+ R ++DP+V G H G D
Sbjct: 53 TLGSAFDRYLQSAGQLTSFNSGEASAIGSVGLERGV-GGLPRHSLTDPAVMG-HPGGGHD 110
Query: 120 LVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVG 179
L + R+ + DQLP DAA+ PG ET+PLPPDASSTLYVEGLP+DST+REVAHIFRPFVG
Sbjct: 111 LARGGRNVNYGDQLPVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVG 170
Query: 180 YKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
Y+EVRLV KESK RGGDPLILCFVDF NPACAATALSALQGY++DE +P+S LRLQFSR
Sbjct: 171 YREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSR 230
Query: 240 NPGPRSVFGARGRR 253
PGPRS G RG+R
Sbjct: 231 FPGPRSGPGPRGKR 244
>gi|449506960|ref|XP_004162895.1| PREDICTED: uncharacterized LOC101222348 isoform 1 [Cucumis sativus]
gi|449506964|ref|XP_004162896.1| PREDICTED: uncharacterized LOC101222348 isoform 2 [Cucumis sativus]
Length = 257
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/262 (62%), Positives = 191/262 (72%), Gaps = 14/262 (5%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTS 60
MAD YWNRQQ LLPS MLKRPR+DY+LP S + + HDMHNYL+ DD G + +KDT
Sbjct: 1 MADDYWNRQQP-LLPSPAMLKRPRTDYELPASGLSTGHDMHNYLTSDDRGGP-RSVKDTQ 58
Query: 61 TIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPV---------SDPSVTG 111
TIGSAYDRYLQS Q SSFTSGE + R V R+PV DP V
Sbjct: 59 TIGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPV---ANRMPVRNRMPGPLLPDPIVMS 115
Query: 112 RHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVA 171
R A PDL N R+ + LP D+ +RPG ET+PLPPDAS+TLYVEGLP DS++REVA
Sbjct: 116 RPPAVSPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA 175
Query: 172 HIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSK 231
HIFRPFVGYKE+R V KESK RGGDPLILCFVDF NPACAATA+SALQGY++DE DP+S
Sbjct: 176 HIFRPFVGYKELRFVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKIDEQDPESN 235
Query: 232 FLRLQFSRNPGPRSVFGARGRR 253
+LRLQFSR+PGPRS G+ G+R
Sbjct: 236 YLRLQFSRHPGPRSGSGSGGKR 257
>gi|356535808|ref|XP_003536435.1| PREDICTED: uncharacterized protein LOC100816230 isoform 1 [Glycine
max]
Length = 251
Score = 302 bits (774), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 168/254 (66%), Positives = 197/254 (77%), Gaps = 4/254 (1%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSR-HDMHNYLSQDDDLGELQPLKDT 59
M DG WNRQQ S LP MLKRPR++YD+ PS + S ++MHNY++++DD + LKDT
Sbjct: 1 MTDGSWNRQQ-SFLPPSAMLKRPRTEYDMSPSGLTSGGNEMHNYIARNDDHTGHRILKDT 59
Query: 60 STIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPD 119
T+GSAYDRYLQSA +SF SGEASA S L R V GG+ ++DP+VTG H G D
Sbjct: 60 KTLGSAYDRYLQSAGLTSFNSGEASAISSVGLGRGV-GGLPHHSLTDPAVTG-HPGGGHD 117
Query: 120 LVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVG 179
L +N R+ + QLP DAA+ PG ETLPLPPDASSTLYVEGLP+ ST+REVAHIFRPFVG
Sbjct: 118 LSRNGRNVNYASQLPVDAASMPGPETLPLPPDASSTLYVEGLPSGSTRREVAHIFRPFVG 177
Query: 180 YKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
Y+EVRLV KESK RGGDPLILCFVDF NPACAATALSALQGY++DE +P+S LRLQFSR
Sbjct: 178 YREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSR 237
Query: 240 NPGPRSVFGARGRR 253
PGPRS G RG+R
Sbjct: 238 FPGPRSGPGLRGKR 251
>gi|255645608|gb|ACU23298.1| unknown [Glycine max]
Length = 242
Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/253 (65%), Positives = 187/253 (73%), Gaps = 11/253 (4%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTS 60
M DGYWNRQQ +LL GMLKRPRSDY ++MHN ++DDD + LKDT
Sbjct: 1 MTDGYWNRQQ-TLLSQSGMLKRPRSDYG---------NEMHNNFARDDDRTGHRMLKDTK 50
Query: 61 TIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDL 120
TIGSAYDRYLQS Q SSFTSGEAS G L R G ++ ++DPSV GRHG GPDL
Sbjct: 51 TIGSAYDRYLQSGQLSSFTSGEASTVGGLGLARGGGG-LSDHSLADPSVMGRHGGGGPDL 109
Query: 121 VQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGY 180
N R + QLP DA +RPG ET+ LPPDASSTLYVEGLP+DST+REVAHIFRPFVGY
Sbjct: 110 APNGRGVNYGGQLPVDAVSRPGPETVSLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGY 169
Query: 181 KEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
+EVRLV KESK RGGDP LCFVDF NPACAATA+SALQGY++DE +P+S LRLQFSR
Sbjct: 170 REVRLVSKESKHRGGDPHYLCFVDFANPACAATAMSALQGYKVDELNPESSHLRLQFSRY 229
Query: 241 PGPRSVFGARGRR 253
PGPRS RG+R
Sbjct: 230 PGPRSGPAFRGKR 242
>gi|255637493|gb|ACU19073.1| unknown [Glycine max]
Length = 251
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/254 (65%), Positives = 197/254 (77%), Gaps = 4/254 (1%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSR-HDMHNYLSQDDDLGELQPLKDT 59
M DG+WNRQQ L PS MLKRPR++YD+ PS + S ++MHNY++++DD + LKDT
Sbjct: 1 MTDGFWNRQQP-LHPSSTMLKRPRTEYDMSPSGLTSGGNEMHNYIARNDDHTGHRMLKDT 59
Query: 60 STIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPD 119
TIGSAYDRYLQSA+ +SF SGEASA G L R GG+ ++DP+V G H G D
Sbjct: 60 KTIGSAYDRYLQSARLTSFNSGEASAVGGVGLGRGA-GGLPHHSLTDPAVMG-HPGGGHD 117
Query: 120 LVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVG 179
+N R+ + QLP DAA+ PG ET+PLPPDASSTLYVEGLP+DST+REVAHIFRPFVG
Sbjct: 118 HARNGRNVNYGGQLPLDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVG 177
Query: 180 YKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
Y+EVRLV KESK RGGDPLILCFVDF NPACAATALSALQGY++DE +P+S LRLQFSR
Sbjct: 178 YREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSR 237
Query: 240 NPGPRSVFGARGRR 253
PGPRS G RG+R
Sbjct: 238 FPGPRSGPGPRGKR 251
>gi|356535806|ref|XP_003536434.1| PREDICTED: uncharacterized protein LOC100815695 [Glycine max]
Length = 251
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/254 (65%), Positives = 196/254 (77%), Gaps = 4/254 (1%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSR-HDMHNYLSQDDDLGELQPLKDT 59
M DG+WNRQQ L PS MLKRPR++YD+ PS + S ++MHNY++++DD + LKDT
Sbjct: 1 MTDGFWNRQQP-LHPSSTMLKRPRTEYDMSPSGLTSGGNEMHNYIARNDDHTGHRMLKDT 59
Query: 60 STIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPD 119
TIGSAYDRYLQSA +SF SGEASA G L R GG+ ++DP+V G H G D
Sbjct: 60 KTIGSAYDRYLQSAGLTSFNSGEASAVGGVGLGRGA-GGLPHHSLTDPAVMG-HPGGGHD 117
Query: 120 LVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVG 179
+N R+ + QLP DAA+ PG ET+PLPPDASSTLYVEGLP+DST+REVAHIFRPFVG
Sbjct: 118 HARNGRNVNYGGQLPLDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVG 177
Query: 180 YKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
Y+EVRLV KESK RGGDPLILCFVDF NPACAATALSALQGY++DE +P+S LRLQFSR
Sbjct: 178 YREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSR 237
Query: 240 NPGPRSVFGARGRR 253
PGPRS G RG+R
Sbjct: 238 FPGPRSGPGPRGKR 251
>gi|356576045|ref|XP_003556145.1| PREDICTED: uncharacterized protein LOC100813445 isoform 1 [Glycine
max]
Length = 252
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/254 (64%), Positives = 195/254 (76%), Gaps = 3/254 (1%)
Query: 1 MADGYWNRQQASLLPSG-GMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDT 59
M DG+WNRQQ L MLKRPR++YD+ PS + ++MHNY++++DD + LKDT
Sbjct: 1 MTDGFWNRQQQQPLQPSSAMLKRPRTEYDMSPSGLTGGNEMHNYIARNDDHTGHRMLKDT 60
Query: 60 STIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPD 119
T+GSAYDRYLQSA +SF SGEASA G L R V GG+ R ++DP+V G H G D
Sbjct: 61 KTLGSAYDRYLQSAGLTSFNSGEASAIGGVGLGRGV-GGLPRHSLTDPAVMG-HPGGGHD 118
Query: 120 LVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVG 179
L +N R+ + QL DAA+ PG ET+PLPPDASSTLYVEGLP+DST+REVAHIFRPFVG
Sbjct: 119 LARNGRNVNYGGQLTVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVG 178
Query: 180 YKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
Y+EVRLV KESK RGGDPLILCFVDF NPACAATALSALQGY++DE +P+S LRLQFSR
Sbjct: 179 YREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSR 238
Query: 240 NPGPRSVFGARGRR 253
PGPRS G RG+R
Sbjct: 239 FPGPRSGPGPRGKR 252
>gi|356535810|ref|XP_003536436.1| PREDICTED: uncharacterized protein LOC100816230 isoform 2 [Glycine
max]
Length = 243
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/254 (64%), Positives = 192/254 (75%), Gaps = 12/254 (4%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTS 60
M DG WNRQQ S LP MLKRPR++Y ++MHNY++++DD + LKDT
Sbjct: 1 MTDGSWNRQQ-SFLPPSAMLKRPRTEY--------GGNEMHNYIARNDDHTGHRILKDTK 51
Query: 61 TIGSAYDRYLQSA-QYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPD 119
T+GSAYDRYLQSA Q +SF SGEASA S L R V GG+ ++DP+VTG H G D
Sbjct: 52 TLGSAYDRYLQSAGQLTSFNSGEASAISSVGLGRGV-GGLPHHSLTDPAVTG-HPGGGHD 109
Query: 120 LVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVG 179
L +N R+ + QLP DAA+ PG ETLPLPPDASSTLYVEGLP+ ST+REVAHIFRPFVG
Sbjct: 110 LSRNGRNVNYASQLPVDAASMPGPETLPLPPDASSTLYVEGLPSGSTRREVAHIFRPFVG 169
Query: 180 YKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
Y+EVRLV KESK RGGDPLILCFVDF NPACAATALSALQGY++DE +P+S LRLQFSR
Sbjct: 170 YREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSR 229
Query: 240 NPGPRSVFGARGRR 253
PGPRS G RG+R
Sbjct: 230 FPGPRSGPGLRGKR 243
>gi|224066731|ref|XP_002302187.1| predicted protein [Populus trichocarpa]
gi|222843913|gb|EEE81460.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 184/255 (72%), Gaps = 7/255 (2%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQD--DDLGELQPLKD 58
M DGYWNRQQ S +PS GMLKRPRSDYD+P S ++M NY +D DD + +KD
Sbjct: 1 MTDGYWNRQQPSNVPSSGMLKRPRSDYDMPSS-----YEMQNYYPRDVDDDRTRYETVKD 55
Query: 59 TSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGP 118
+ +IGSAYDRYLQ+AQ +F S EASA G R + GG++ LP++D +V R + G
Sbjct: 56 SKSIGSAYDRYLQNAQAPTFASREASALGGAGFGRGIGGGMSGLPIADSAVMTRPRSAGL 115
Query: 119 DLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFV 178
DL N R Q P D AR E LPPDAS+TLYVEG P D ++REVAHIFRPFV
Sbjct: 116 DLASNGRDVGFVRQRPEDRIARSDREMAHLPPDASNTLYVEGFPPDCSRREVAHIFRPFV 175
Query: 179 GYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFS 238
GYKEVRLV KE++ RGGDP+ILCFVDF NP CAATA+SALQGY++DE DPDS++LRLQFS
Sbjct: 176 GYKEVRLVSKEARQRGGDPIILCFVDFVNPECAATAMSALQGYKVDEHDPDSRYLRLQFS 235
Query: 239 RNPGPRSVFGARGRR 253
R+PGPRS +RGRR
Sbjct: 236 RHPGPRSGPISRGRR 250
>gi|358345383|ref|XP_003636759.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|23304837|emb|CAD48198.1| RNA-binding protein [Medicago truncatula]
gi|355502694|gb|AES83897.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 261
Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 157/251 (62%), Positives = 184/251 (73%), Gaps = 6/251 (2%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTS 60
MADGYWNRQQ SLLP G+ KRPR DY++P S + S ++MH YLS+++D +KD+
Sbjct: 1 MADGYWNRQQ-SLLPHSGLHKRPRPDYEMPASGLPSGNEMH-YLSREEDRSGHPMVKDSK 58
Query: 61 TIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPS-VTGRHGATGPD 119
TIGSAYDRYLQ Q SFTSGEAS L+R + GG+ +SDPS + GRHG GPD
Sbjct: 59 TIGSAYDRYLQ-GQVPSFTSGEASTVGALGLQRGI-GGLPNHSLSDPSAMIGRHGGGGPD 116
Query: 120 LVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVG 179
L N R + Q P D +R G E LPPDAS TLY+EGLP+D T+REVAHIFRPFVG
Sbjct: 117 LAPNGRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIFRPFVG 176
Query: 180 YKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
Y+EVRLV KE+K R GDPLILCFVDF NPACAATALSALQGY++DE +P+S LRLQFSR
Sbjct: 177 YREVRLVSKEAKHR-GDPLILCFVDFANPACAATALSALQGYKVDEINPESSHLRLQFSR 235
Query: 240 NPGPRSVFGAR 250
PGPRS G R
Sbjct: 236 YPGPRSGGGPR 246
>gi|356576047|ref|XP_003556146.1| PREDICTED: uncharacterized protein LOC100813445 isoform 2 [Glycine
max]
Length = 245
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/255 (63%), Positives = 191/255 (74%), Gaps = 12/255 (4%)
Query: 1 MADGYWNRQQASLLPSG-GMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDT 59
M DG+WNRQQ L MLKRPR++Y ++MHNY++++DD + LKDT
Sbjct: 1 MTDGFWNRQQQQPLQPSSAMLKRPRTEY--------GGNEMHNYIARNDDHTGHRMLKDT 52
Query: 60 STIGSAYDRYLQSA-QYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGP 118
T+GSAYDRYLQSA Q +SF SGEASA G L R V GG+ R ++DP+V G H G
Sbjct: 53 KTLGSAYDRYLQSAGQLTSFNSGEASAIGGVGLGRGV-GGLPRHSLTDPAVMG-HPGGGH 110
Query: 119 DLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFV 178
DL +N R+ + QL DAA+ PG ET+PLPPDASSTLYVEGLP+DST+REVAHIFRPFV
Sbjct: 111 DLARNGRNVNYGGQLTVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFV 170
Query: 179 GYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFS 238
GY+EVRLV KESK RGGDPLILCFVDF NPACAATALSALQGY++DE +P+S LRLQFS
Sbjct: 171 GYREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFS 230
Query: 239 RNPGPRSVFGARGRR 253
R PGPRS G RG+R
Sbjct: 231 RFPGPRSGPGPRGKR 245
>gi|296088114|emb|CBI35503.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/253 (58%), Positives = 174/253 (68%), Gaps = 10/253 (3%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTS 60
MAD +W+RQ G+ KRPRSDYDLP S + S +++HNYL Q DDLG + +KD+
Sbjct: 32 MADRFWSRQYF------GVPKRPRSDYDLPYSGLPSGNEVHNYLVQGDDLGGPRSVKDSK 85
Query: 61 TIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDL 120
T+G AYD+Y Q SFTSG AS F G L A ++ L +S P+V A DL
Sbjct: 86 TVGLAYDQYFQ--DIPSFTSGAASDFRGVGLGTATGEAISGLSISGPAVMDHLEALDSDL 143
Query: 121 VQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGY 180
+ + QL DA RP ET PLPPDASSTLYVEGLP DST+REVAHIFRPFVGY
Sbjct: 144 PPSGQGRRFGHQL--DAIIRPSRETAPLPPDASSTLYVEGLPPDSTRREVAHIFRPFVGY 201
Query: 181 KEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
KEVRLV KESK RG DPL+LCFVDF +PACAATALSALQGY++ E D DS +RLQFS+
Sbjct: 202 KEVRLVSKESKHRGRDPLVLCFVDFTSPACAATALSALQGYKISEHDRDSAQMRLQFSQY 261
Query: 241 PGPRSVFGARGRR 253
P PRS G+RG+R
Sbjct: 262 PDPRSGSGSRGKR 274
>gi|359493018|ref|XP_002264314.2| PREDICTED: uncharacterized protein LOC100242739 [Vitis vinifera]
Length = 261
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/253 (58%), Positives = 174/253 (68%), Gaps = 10/253 (3%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTS 60
MAD +W+RQ G+ KRPRSDYDLP S + S +++HNYL Q DDLG + +KD+
Sbjct: 1 MADRFWSRQYF------GVPKRPRSDYDLPYSGLPSGNEVHNYLVQGDDLGGPRSVKDSK 54
Query: 61 TIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDL 120
T+G AYD+Y Q SFTSG AS F G L A ++ L +S P+V A DL
Sbjct: 55 TVGLAYDQYFQ--DIPSFTSGAASDFRGVGLGTATGEAISGLSISGPAVMDHLEALDSDL 112
Query: 121 VQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGY 180
+ + QL DA RP ET PLPPDASSTLYVEGLP DST+REVAHIFRPFVGY
Sbjct: 113 PPSGQGRRFGHQL--DAIIRPSRETAPLPPDASSTLYVEGLPPDSTRREVAHIFRPFVGY 170
Query: 181 KEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
KEVRLV KESK RG DPL+LCFVDF +PACAATALSALQGY++ E D DS +RLQFS+
Sbjct: 171 KEVRLVSKESKHRGRDPLVLCFVDFTSPACAATALSALQGYKISEHDRDSAQMRLQFSQY 230
Query: 241 PGPRSVFGARGRR 253
P PRS G+RG+R
Sbjct: 231 PDPRSGSGSRGKR 243
>gi|255584574|ref|XP_002533013.1| conserved hypothetical protein [Ricinus communis]
gi|223527202|gb|EEF29367.1| conserved hypothetical protein [Ricinus communis]
Length = 1031
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/257 (59%), Positives = 179/257 (69%), Gaps = 5/257 (1%)
Query: 1 MADGYWN---RQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLK 57
M DGYWN +QQ LL SG LKR R +YD+ S + S H++HNY +DDD Q +K
Sbjct: 776 MTDGYWNHRHQQQHPLLQSGESLKRHRPEYDIASSGLPSSHEIHNYYPRDDDRERYQAVK 835
Query: 58 DTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATG 117
D+ TIGSAYDRYLQ+AQ + +SGEAS S RA GG+T LP+ D + R +G
Sbjct: 836 DSKTIGSAYDRYLQNAQIAPLSSGEASGLSVG-FGRASGGGMTGLPILDSGMARRARPSG 894
Query: 118 PDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPF 177
DL N R Q P + ARP ET+PLP DASSTLYVEGLP S +REVAHIFRPF
Sbjct: 895 QDLASNGRDIGFVSQPPANKIARPVRETVPLPQDASSTLYVEGLPPGSKRREVAHIFRPF 954
Query: 178 VGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQF 237
VGYKEVRLV KESK R DP+ILCFVDF++ ACAATA+SALQGY+MDE D +S LRLQF
Sbjct: 955 VGYKEVRLVSKESKNRTRDPIILCFVDFDDAACAATAMSALQGYKMDEHDCESSCLRLQF 1014
Query: 238 SRNPGPRS-VFGARGRR 253
SR PGPRS G+RG+R
Sbjct: 1015 SRYPGPRSGGSGSRGKR 1031
>gi|238478568|ref|NP_001154354.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
gi|332191964|gb|AEE30085.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
Length = 253
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 169/259 (65%), Gaps = 13/259 (5%)
Query: 1 MADGYWNRQQASLLPSGGML-----KRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQP 55
MAD YWN+Q+ LP KRPRSD+ P + S DMH+YLSQD+D G
Sbjct: 1 MADEYWNQQRQYQLPISSNPHVLPPKRPRSDFQGTPYLIPS-GDMHSYLSQDEDRGIPHS 59
Query: 56 LKDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGA 115
+KDT +IGSAYDRYLQS Q S EA F+G + R GG +P PS+
Sbjct: 60 VKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQ--GGSNMMP--GPSMGELMAG 115
Query: 116 TGPDLVQNLRSSSIDDQL-PFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIF 174
G L + R + D D+ RPG E PLPPD S+TLYVEGLP++ ++REV+HIF
Sbjct: 116 CGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLYVEGLPSNCSRREVSHIF 175
Query: 175 RPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLR 234
RPFVGY+EVRLV ++SK R GDP +LCFVDFEN ACAATALSALQ YRMDED+PDSK LR
Sbjct: 176 RPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQDYRMDEDEPDSKILR 235
Query: 235 LQFSRNPGPRSVFGARGRR 253
LQF RNPGPR G RG R
Sbjct: 236 LQFFRNPGPRP--GQRGGR 252
>gi|297842455|ref|XP_002889109.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334950|gb|EFH65368.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/254 (57%), Positives = 172/254 (67%), Gaps = 15/254 (5%)
Query: 1 MADGYWNRQ-QASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDT 59
MADGYWN+Q Q LPSG KRPRSD++ PPS + + H Y +D+DL + DT
Sbjct: 1 MADGYWNQQRQQHHLPSG-PPKRPRSDFEAPPSTMATGHG-GGYYPRDEDLD----VPDT 54
Query: 60 STIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPD 119
TIGSAYDRYLQS Q SS SGE + S + R GG D + R G D
Sbjct: 55 RTIGSAYDRYLQSVQTSSLQSGEGGSVS---MGRPGGGGGGNGQTVDDFMMRRGGVLPLD 111
Query: 120 LVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVG 179
N ++ D P ++ R ETLPLPPDAS+TLYVEGLP++ ++REVAHIFRPFVG
Sbjct: 112 YGPNGQAIGFD---PPESVGRRNRETLPLPPDASNTLYVEGLPSNCSRREVAHIFRPFVG 168
Query: 180 YKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
Y+EVRLV K+SK R GDP++LCFVDF NPACAATALSALQGYRMDE++ DSKFLRLQFSR
Sbjct: 169 YREVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRLQFSR 228
Query: 240 NPGPRSVFGARGRR 253
PG R G RGRR
Sbjct: 229 KPGSRP--GQRGRR 240
>gi|186478724|ref|NP_173554.3| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
gi|332191963|gb|AEE30084.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
Length = 421
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 148/216 (68%), Gaps = 7/216 (3%)
Query: 39 DMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGG 98
DMH+YLSQD+D G +KDT +IGSAYDRYLQS Q S EA F+G + R GG
Sbjct: 211 DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQ--GG 268
Query: 99 VTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQL-PFDAAARPGHETLPLPPDASSTLY 157
+P PS+ G L + R + D D+ RPG E PLPPD S+TLY
Sbjct: 269 SNMMP--GPSMGELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLY 326
Query: 158 VEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSA 217
VEGLP++ ++REV+HIFRPFVGY+EVRLV ++SK R GDP +LCFVDFEN ACAATALSA
Sbjct: 327 VEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSA 386
Query: 218 LQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
LQ YRMDED+PDSK LRLQF RNPGPR G RG R
Sbjct: 387 LQDYRMDEDEPDSKILRLQFFRNPGPRP--GQRGGR 420
>gi|427199356|gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
Length = 233
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 128/257 (49%), Positives = 169/257 (65%), Gaps = 28/257 (10%)
Query: 1 MADGYWNRQQASLLPSGGML----KRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPL 56
MAD YW + P + KR RSDYD+P S H++ +Y S+DD+ G L+ +
Sbjct: 1 MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVP-----SGHELPSYFSRDDERGTLRGM 55
Query: 57 KDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGAT 116
+DT +IG++YDRYL+SAQ SS+ G+++ R + GG++ V DP + G G+
Sbjct: 56 RDTDSIGASYDRYLRSAQVSSYGGGQSA--------RPISGGMSSRAVDDPRIVG-MGSV 106
Query: 117 GPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRP 176
P ++++ D+ RP +PLPPDASSTL+VEGLP++ T+REVAHIFRP
Sbjct: 107 EP-------ATTVKDRTLGYGGGRP---EVPLPPDASSTLFVEGLPSNCTRREVAHIFRP 156
Query: 177 FVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQ 236
FVGYKEVRLV KES+ GGDPL+LCFVDF +PA AATA+ ALQGY+ DE D DS LRLQ
Sbjct: 157 FVGYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAATAMDALQGYKFDEHDRDSVSLRLQ 216
Query: 237 FSRNPGPRSVFGARGRR 253
F+R PG RS G RG+R
Sbjct: 217 FARYPGARSGGGHRGKR 233
>gi|30699215|ref|NP_177820.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|119360107|gb|ABL66782.1| At1g76940 [Arabidopsis thaliana]
gi|332197785|gb|AEE35906.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 233
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 159/253 (62%), Gaps = 20/253 (7%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTS 60
MADGYWN+Q+ P GG +KRPRSD++ P S + H Y +D+DL + DT
Sbjct: 1 MADGYWNQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGG-GYYPRDEDLD----VPDTR 55
Query: 61 TIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDL 120
TIGSAYDRYLQS Q SGE + S R GG + D + R G D
Sbjct: 56 TIGSAYDRYLQSVQ-----SGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDH 110
Query: 121 VQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGY 180
N + D P LP DAS+TLYVEGLP++ ++REVAHIFRPFVGY
Sbjct: 111 GPNGHTIGFDPPEPVGRRN--------LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGY 162
Query: 181 KEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
+EVRLV K+SK R GDP++LCFVDF NPACAATALSALQGYRMDE++ DSKFLRLQFSR
Sbjct: 163 REVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRLQFSRK 222
Query: 241 PGPRSVFGARGRR 253
PG R G RGRR
Sbjct: 223 PGSRP--GQRGRR 233
>gi|302143942|emb|CBI23047.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/255 (50%), Positives = 162/255 (63%), Gaps = 27/255 (10%)
Query: 1 MADGYWNRQQASLLPSGGML--KRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKD 58
MAD YW + P L KRPRSDYD+P HD+ +Y S++D+ + ++D
Sbjct: 1 MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVP-----GGHDLPSYFSREDERAAHRSIRD 55
Query: 59 TSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGP 118
+ +IG++YDRYL++AQ S+ G R + GG+T PV DP V G G
Sbjct: 56 SDSIGASYDRYLRNAQMPSY---------GGDSGRPLSGGITSHPVDDPRVVGVRGV--- 103
Query: 119 DLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFV 178
D ++S S L F G LPLPPDASSTL+VEGLPA+ T+REV+HIFRPFV
Sbjct: 104 DQGATVKSQS----LGFSG----GRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFV 155
Query: 179 GYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFS 238
GYKEVRLV KES+ GGDPL+LCFVDF +PA AATA+ ALQGY+ DE D DS LRLQF+
Sbjct: 156 GYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFA 215
Query: 239 RNPGPRSVFGARGRR 253
R PG RS G RG+R
Sbjct: 216 RYPGARSGGGHRGKR 230
>gi|147806465|emb|CAN74250.1| hypothetical protein VITISV_019089 [Vitis vinifera]
Length = 337
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 132/255 (51%), Positives = 156/255 (61%), Gaps = 31/255 (12%)
Query: 28 DLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSA-------------Q 74
DLP S + S +++HNYL Q DDLG + +KD+ T+G AYD+Y Q
Sbjct: 47 DLPYSGLPSGNEVHNYLVQGDDLGGPRSVKDSKTVGLAYDQYFQDVCALKPEPMFILIRH 106
Query: 75 YSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLP 134
SFTSG AS F G L A ++ L +S P+V A DL + QL
Sbjct: 107 IPSFTSGAASDFRGVGLGTATGEAISGLSISGPAVMDHLEALDSDLPPSGXGRRFGHQL- 165
Query: 135 FDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVA----------------HIFRPFV 178
DA RP ET PLPPDASSTLYVEGLP DST+REVA +IFRPFV
Sbjct: 166 -DAIIRPSRETAPLPPDASSTLYVEGLPPDSTRREVARILQDVITLPRNYCDSYIFRPFV 224
Query: 179 GYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFS 238
GYKEVRLV KESK RG DPL+LCFVDF +PACAATALSALQGY++ E D DS +RLQFS
Sbjct: 225 GYKEVRLVSKESKHRGRDPLVLCFVDFTSPACAATALSALQGYKIXEHDRDSAQMRLQFS 284
Query: 239 RNPGPRSVFGARGRR 253
+ P PRS G+RG+R
Sbjct: 285 QYPDPRSGSGSRGKR 299
>gi|359490723|ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
Length = 229
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/255 (50%), Positives = 162/255 (63%), Gaps = 28/255 (10%)
Query: 1 MADGYWNRQQASLLPSGGML--KRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKD 58
MAD YW + P L KRPRSDYD+P HD+ +Y S++D+ + ++D
Sbjct: 1 MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVP-----GGHDLPSYFSREDERAAHRSIRD 55
Query: 59 TSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGP 118
+ +IG++YDRYL++A S + GD R + GG+T PV DP V G G
Sbjct: 56 SDSIGASYDRYLRNAMPS---------YGGDS-GRPLSGGITSHPVDDPRVVGVRGV--- 102
Query: 119 DLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFV 178
D ++S S L F G LPLPPDASSTL+VEGLPA+ T+REV+HIFRPFV
Sbjct: 103 DQGATVKSQS----LGFSG----GRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFV 154
Query: 179 GYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFS 238
GYKEVRLV KES+ GGDPL+LCFVDF +PA AATA+ ALQGY+ DE D DS LRLQF+
Sbjct: 155 GYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFA 214
Query: 239 RNPGPRSVFGARGRR 253
R PG RS G RG+R
Sbjct: 215 RYPGARSGGGHRGKR 229
>gi|224118350|ref|XP_002317797.1| predicted protein [Populus trichocarpa]
gi|222858470|gb|EEE96017.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/258 (50%), Positives = 163/258 (63%), Gaps = 30/258 (11%)
Query: 1 MADGYW-----NRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQP 55
MAD YW +RQQ S KRPR DYD+P S D+ +Y S+DDD G L
Sbjct: 1 MADSYWRYAGDSRQQPPQSMSSLTGKRPRIDYDIP-----SGRDLSSYYSRDDDRGALHV 55
Query: 56 LKDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGA 115
++D+ +IG++YDRYL+S SS+ G+++ RA+ GV PV D + +
Sbjct: 56 IRDSDSIGASYDRYLRSGTVSSYGGGQSA--------RAM-SGVPSHPVDDTRMV----S 102
Query: 116 TGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFR 175
GP + +S D L + G + LPPDASSTL+VEGLP+D T+REV+HIFR
Sbjct: 103 MGP---MDPGASVKDRSLRMGS----GRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFR 155
Query: 176 PFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRL 235
PFVGYKEVRLV KES+ GGDPL+LCFVDF +PA AATA+ ALQGYR DE D DS LRL
Sbjct: 156 PFVGYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAATAMDALQGYRFDEHDRDSFHLRL 215
Query: 236 QFSRNPGPRSVFGARGRR 253
QF+R PG RS G RG+R
Sbjct: 216 QFARYPGARSGGGHRGKR 233
>gi|255549562|ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223545062|gb|EEF46575.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 232
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/258 (50%), Positives = 168/258 (65%), Gaps = 31/258 (12%)
Query: 1 MADGYW---NRQQASLLPSGGML-KRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPL 56
MAD YW + +Q P ++ KR RSDYD V S H++ NY ++DDD G L+ +
Sbjct: 1 MADAYWRYSDARQPQQQPIPTLVGKRSRSDYD-----VTSGHELPNYYTRDDDRGALRAI 55
Query: 57 KDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGAT 116
+DT +IG++YDRYL+SA SS++ G+++ R + G R+ DP + G G
Sbjct: 56 RDTDSIGASYDRYLRSAPISSYSGGQSA--------RPISGVPNRV-ADDPRIMGIGGLD 106
Query: 117 -GPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFR 175
GP ++ D+ + RP ET LPPDA+STL+VEGLP+D ++REVAHIFR
Sbjct: 107 PGP---------TVKDRTLGLGSGRP--ET-SLPPDATSTLFVEGLPSDCSRREVAHIFR 154
Query: 176 PFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRL 235
PFVGYKEVRLV KES+ GGDPL+LCFVDF +PA AATA+ ALQGY+ DE D DS LRL
Sbjct: 155 PFVGYKEVRLVSKESRRPGGDPLVLCFVDFLSPAHAATAMDALQGYKFDEHDRDSVHLRL 214
Query: 236 QFSRNPGPRSVFGARGRR 253
QF+R PG RS G RG+R
Sbjct: 215 QFARYPGARSGGGHRGKR 232
>gi|363807818|ref|NP_001241926.1| uncharacterized protein LOC100786188 [Glycine max]
gi|255640386|gb|ACU20480.1| unknown [Glycine max]
Length = 230
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 158/254 (62%), Gaps = 25/254 (9%)
Query: 1 MADGYWNRQQAS-LLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDT 59
M+D YW S PS KR RSDYD V HD+ +Y DDD G L+ ++DT
Sbjct: 1 MSDAYWRYAAESRQAPSSIAGKRSRSDYD-----VSGVHDLPSYFPHDDDRGGLRVIRDT 55
Query: 60 STIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPD 119
++ ++Y+RYL+SAQ SS+ SG+++ R + G + + D V G
Sbjct: 56 ESLDASYERYLRSAQVSSYGSGQST--------RTIDGRIPNRAIDDSHVANIGGVD--- 104
Query: 120 LVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVG 179
R ++ D++P ++ R H LPPDA+STL+VEGLP++ T+REVAHIFRPFVG
Sbjct: 105 -----RGTNAKDKMPGLSSGRADHS---LPPDATSTLFVEGLPSNCTRREVAHIFRPFVG 156
Query: 180 YKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
YKEVRLV KES+ GGDPL+LCFVDF +PA AATA+ ALQGY+ DE D +S LR QF+R
Sbjct: 157 YKEVRLVSKESRQPGGDPLVLCFVDFMSPAHAATAMEALQGYKFDELDRNSVNLRFQFAR 216
Query: 240 NPGPRSVFGARGRR 253
PG RS RG+R
Sbjct: 217 YPGARSGGVHRGKR 230
>gi|357443731|ref|XP_003592143.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355481191|gb|AES62394.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|388515921|gb|AFK46022.1| unknown [Medicago truncatula]
Length = 147
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/138 (75%), Positives = 117/138 (84%), Gaps = 1/138 (0%)
Query: 117 GPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRP 176
GPDL +N R + QLP DA +RPG ET+PLP DASSTLYVEGLP+DSTKREVAHIFRP
Sbjct: 10 GPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFRP 69
Query: 177 FVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQ 236
FVGY+EVRLV KESK RGGDPLILCFVDF NPACAATALSALQGY++DE +P+S +LRLQ
Sbjct: 70 FVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDEINPESSYLRLQ 129
Query: 237 FSRNPGPRSVF-GARGRR 253
FSR+PG RS G RG+R
Sbjct: 130 FSRSPGRRSGGPGPRGKR 147
>gi|388504624|gb|AFK40378.1| unknown [Medicago truncatula]
Length = 228
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/257 (46%), Positives = 160/257 (62%), Gaps = 33/257 (12%)
Query: 1 MADGYW----NRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPL 56
M+D YW ++Q A G KRPR++YD V H++ NY DDD G LQ +
Sbjct: 1 MSDAYWRYAESQQHAPPTIPG---KRPRTEYD-----VSGVHNLANYFPHDDDRGRLQVI 52
Query: 57 KDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGAT 116
+DT ++ ++Y+RYL++A SS SG+++ R + GGV + D VT G
Sbjct: 53 RDTESLDASYERYLRNA-ISSHGSGQST--------RTIDGGVPSHSIDDSHVTSMGGVD 103
Query: 117 GPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRP 176
R +++ Q+ + RP H LPP A++TL+VEGLP++ T+REVAHIFRP
Sbjct: 104 --------RRTNVKGQILELSGGRPDHS---LPPGATNTLFVEGLPSNCTRREVAHIFRP 152
Query: 177 FVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQ 236
FVGYKEVRLV KES+ GGDPL+LCFVDF +PA AATA+ AL GY+ DE D +S LR Q
Sbjct: 153 FVGYKEVRLVSKESRQPGGDPLLLCFVDFVSPAHAATAMDALHGYKFDELDRNSVNLRFQ 212
Query: 237 FSRNPGPRSVFGARGRR 253
F+RNPG RS G RG+R
Sbjct: 213 FARNPG-RSGGGHRGKR 228
>gi|224135091|ref|XP_002321981.1| predicted protein [Populus trichocarpa]
gi|222868977|gb|EEF06108.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/253 (47%), Positives = 157/253 (62%), Gaps = 33/253 (13%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTS 60
MAD YW G ++P+ D+P S D+ +Y S+DDD G L+ ++D+
Sbjct: 1 MADSYWR--------YAGDSRQPQPHLDVP-----SGRDLSSYYSRDDDRGALRVIRDSD 47
Query: 61 TIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDL 120
+IG++YDRYL S SS+ G+++ RA+ G R PV D + G+ P
Sbjct: 48 SIGASYDRYLHSGTISSYGGGQSA--------RAISGVPVR-PVDDLRMVS-MGSMDP-- 95
Query: 121 VQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGY 180
SS+ D+ + R + LPPDASSTL+VEGLP+D T+REV+HIFRPFVGY
Sbjct: 96 -----GSSVKDRSMRTGSGR---SEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGY 147
Query: 181 KEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
KEVRLV KES+ GGDPL+LCFVDF +PA AAT++ ALQGYR DE D DS LRLQF+R
Sbjct: 148 KEVRLVSKESRHPGGDPLVLCFVDFLSPAHAATSMDALQGYRFDEHDRDSVDLRLQFARY 207
Query: 241 PGPRSVFGARGRR 253
PG RS G RG+R
Sbjct: 208 PGARSGGGHRGKR 220
>gi|363818125|ref|NP_001242627.1| uncharacterized protein LOC100800440 [Glycine max]
gi|255644702|gb|ACU22853.1| unknown [Glycine max]
Length = 230
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/254 (46%), Positives = 154/254 (60%), Gaps = 25/254 (9%)
Query: 1 MADGYWNRQQAS-LLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDT 59
M+D YW S PS KR RSDYD V HD+ Y DDD G L+ ++DT
Sbjct: 1 MSDAYWRYAAESRQAPSSIAGKRSRSDYD-----VSGVHDLPGYFPHDDDRGGLRVIRDT 55
Query: 60 STIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPD 119
++ ++Y+RYL+SAQ SS+ SG+++ R + G + + D V G
Sbjct: 56 ESLDASYERYLRSAQVSSYGSGQST--------RTISGRIPNRAIDDSHVANIGGID--- 104
Query: 120 LVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVG 179
R ++ D++ ++ R H LPPDA+STL+VEGLP + T+REVAHIF PFVG
Sbjct: 105 -----RGTNAKDKMLGLSSGRTDHS---LPPDATSTLFVEGLPPNCTRREVAHIFPPFVG 156
Query: 180 YKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
YKEVRLV KES+ GGDPL+LCFVDF +PA AATA+ ALQGY+ DE D +S LR QF+R
Sbjct: 157 YKEVRLVSKESRQPGGDPLVLCFVDFLSPAHAATAMEALQGYKFDELDRNSVNLRFQFAR 216
Query: 240 NPGPRSVFGARGRR 253
PG RS RG+R
Sbjct: 217 YPGARSGGVHRGKR 230
>gi|449456997|ref|XP_004146235.1| PREDICTED: uncharacterized protein LOC101218789 [Cucumis sativus]
gi|449529543|ref|XP_004171759.1| PREDICTED: uncharacterized protein LOC101224897 [Cucumis sativus]
Length = 232
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/259 (46%), Positives = 160/259 (61%), Gaps = 33/259 (12%)
Query: 1 MADGYW----NRQQ--ASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQ 54
M+D YW ++QQ +S+ P G KRPR DYD H++ NY + DD LQ
Sbjct: 1 MSDAYWRYTDSQQQPPSSVPPVVG--KRPRVDYD-----TSGLHELPNYYPRQDDRPVLQ 53
Query: 55 PLKDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHG 114
+K +I +Y+RYL+++Q SS+ G + R V GGV P++DP + G G
Sbjct: 54 GIKSVDSINESYERYLRTSQISSY---------GGQSARPVGGGVPGHPMNDPPILGLGG 104
Query: 115 ATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIF 174
+ ++++D+ RP +PLPPDAS+TL+VEGLP+ T+REVAHIF
Sbjct: 105 V--------VSGANVNDRSTSFGGGRP---NMPLPPDASNTLFVEGLPSSCTRREVAHIF 153
Query: 175 RPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLR 234
RPFVGYKEVRLV KES+ G DP++L FVDF +PA AATA+ ALQGY+ DE D DS LR
Sbjct: 154 RPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLR 213
Query: 235 LQFSRNPGPRSVFGARGRR 253
LQF+R PG RS G RG+R
Sbjct: 214 LQFARFPGARSGGGHRGKR 232
>gi|297850552|ref|XP_002893157.1| hypothetical protein ARALYDRAFT_472365 [Arabidopsis lyrata subsp.
lyrata]
gi|297338999|gb|EFH69416.1| hypothetical protein ARALYDRAFT_472365 [Arabidopsis lyrata subsp.
lyrata]
Length = 411
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/227 (51%), Positives = 141/227 (62%), Gaps = 26/227 (11%)
Query: 34 VLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRR 93
V+ MH+YLS+D+D G +KDT TIGSAYD+YL + Q S S EA F+G + R
Sbjct: 203 VMPSGGMHSYLSRDEDRGIPHSVKDTRTIGSAYDQYLNN-QTPSVPSEEAGPFNGAGMGR 261
Query: 94 AVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDAS 153
+ P + GR G+ D N R+ G E PLPPD S
Sbjct: 262 QGGNNMMPGPPMGELMAGRGGSFPSDFRPNGRAI--------------GRE--PLPPDVS 305
Query: 154 STLYVEGLPADSTKREVA-------HIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
+TLYVEGLP++ ++RE +FRPFVGY+EVRLV K+SK R GDP++LCFVDFE
Sbjct: 306 NTLYVEGLPSNCSRRENVLSCSLSLTVFRPFVGYREVRLVTKDSKHRSGDPVVLCFVDFE 365
Query: 207 NPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
NPACAATALSALQGYRMDE + D K LRLQFSRNPGPR G RG R
Sbjct: 366 NPACAATALSALQGYRMDEAESDFKILRLQFSRNPGPRP--GQRGGR 410
>gi|388505956|gb|AFK41044.1| unknown [Lotus japonicus]
Length = 232
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 146/242 (60%), Gaps = 25/242 (10%)
Query: 1 MADGYWNRQQASLL-PSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDT 59
M+D YW S PS KR RSDYD V HDM Y DDD G L+ ++DT
Sbjct: 1 MSDAYWRYAAESRHNPSAIAAKRARSDYD-----VSGVHDMPGYYPHDDDRGGLRVIRDT 55
Query: 60 STIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPD 119
++ ++Y+RYL+SAQ SSF G+++ R + G + D VT G
Sbjct: 56 ESLDASYERYLRSAQVSSFGEGQST--------RTIRGRLPSHSFDDSHVTSIGGVD--- 104
Query: 120 LVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVG 179
R S +++ ++ RP H LPPDA+STL+VEGLP + +REVAHIFRPFVG
Sbjct: 105 -----RGPSAKEKILGLSSGRPDHS---LPPDATSTLFVEGLPTNCPRREVAHIFRPFVG 156
Query: 180 YKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
YKEVRLV KES+ GGDPL+LCFVDFE+PA AATA ALQGY+ DE D +S LR QF+R
Sbjct: 157 YKEVRLVSKESRQPGGDPLVLCFVDFESPAHAATAKDALQGYKFDELDRNSANLRFQFAR 216
Query: 240 NP 241
P
Sbjct: 217 YP 218
>gi|357464011|ref|XP_003602287.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355491335|gb|AES72538.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 258
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 159/261 (60%), Gaps = 38/261 (14%)
Query: 1 MADGYW----NRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPL 56
M+D YW ++Q A G KRPR++YD V H++ NY DDD G LQ +
Sbjct: 1 MSDAYWRYAESQQHAPPTIPG---KRPRTEYD-----VSGVHNLANYFPHDDDRGRLQVI 52
Query: 57 KDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGAT 116
+DT ++ ++Y+RYL++A SS SG+++ R + GGV + D VT G
Sbjct: 53 RDTESLDASYERYLRNA-ISSHGSGQST--------RTIDGGVPSHSIDDSHVTSMGGVD 103
Query: 117 GPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHI--- 173
R +++ DQ+ + RP H LPP A++TL+VEGLP++ T+REVA I
Sbjct: 104 --------RRTNVKDQILELSGGRPDHS---LPPGATNTLFVEGLPSNCTRREVARILSS 152
Query: 174 --FRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSK 231
FRPFVGYKEVRLV KES+ GGDPL+LCFVDF +PA AATA+ AL GY+ DE D +S
Sbjct: 153 DIFRPFVGYKEVRLVSKESRQPGGDPLLLCFVDFVSPAHAATAMDALHGYKFDELDRNSV 212
Query: 232 FLRLQFSRNPGPRSVFGARGR 252
LR QF+RNPG RS G RG+
Sbjct: 213 NLRFQFARNPG-RSGGGHRGK 232
>gi|62867580|emb|CAI84655.1| hypothetical protein [Nicotiana tabacum]
Length = 183
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 139/189 (73%), Gaps = 9/189 (4%)
Query: 1 MADGYWNRQQASLLP-SGGMLKRPRSDY--DLPPSEVLSRHDMHNYLSQDDDLGELQPLK 57
M D YWN+ + + LP S G+LKRPRS+Y DLPPS + S H+MH+YL +DDD G + +
Sbjct: 1 MGDAYWNQHREAPLPQSAGLLKRPRSEYVPDLPPSGMSSAHEMHHYLGRDDDRGGPR-VV 59
Query: 58 DTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATG 117
DT +IGSAYDRYLQS+Q SS + GEA+ + G L RA GG++ LPV DP + R G
Sbjct: 60 DTQSIGSAYDRYLQSSQLSSLSVGEANNYKGVGLARAGAGGISSLPVRDPLPSAR----G 115
Query: 118 PDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPF 177
P+L N R+ + Q+P ++ RP ETLPLPPDAS+TLY+EGLPADS++REVAHIFRPF
Sbjct: 116 PELAPNGRAMVLRGQMPVESLPRP-RETLPLPPDASNTLYIEGLPADSSRREVAHIFRPF 174
Query: 178 VGYKEVRLV 186
VGYKEVRLV
Sbjct: 175 VGYKEVRLV 183
>gi|374256077|gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
guineensis]
Length = 294
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 157/264 (59%), Gaps = 31/264 (11%)
Query: 1 MADGYWN-----RQQASLLPSGGMLKRPRSDY-DLPPS-EVLSRHDMHNYLSQDDDLGEL 53
MAD YW Q A++ LKRPR+DY D+P EVL Y S+D++
Sbjct: 35 MADAYWRYSDPRHQAAAMAAPTAPLKRPRADYADIPGGPEVL------GYYSRDEERTGH 88
Query: 54 QPLKDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRH 113
+ ++DT +I ++YDRYL++ SF +GE+ R V GG+T PV D + G
Sbjct: 89 RTIRDTESIAASYDRYLRNG--VSFGAGESV--------RTVAGGMTGHPVDDRRMMGVG 138
Query: 114 GATGPDLVQNLRS-----SSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKR 168
G G + +D + RP PLP DAS+TL+VEGLPA+ T+R
Sbjct: 139 GMDGRTVGYGGGRPEPPLGGMDGRSVGYGGGRP---EPPLPQDASNTLFVEGLPANCTRR 195
Query: 169 EVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDP 228
EV+HIFRPFVG++EVRLV KES+ GGDPL+LCFVDF PA AA AL ALQGY+ DE D
Sbjct: 196 EVSHIFRPFVGFREVRLVNKESRHPGGDPLVLCFVDFSTPAQAAVALDALQGYKFDEHDR 255
Query: 229 DSKFLRLQFSRNPGPRSVFGARGR 252
+S LRLQF+R PGPRS G RG+
Sbjct: 256 ESANLRLQFARFPGPRSSGGPRGK 279
>gi|8920632|gb|AAF81354.1|AC036104_3 Contains weak similarity to bab503 major core protein from Simian
T-cell lymphotrophic virus type 1 gb|AF230486
[Arabidopsis thaliana]
Length = 430
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 127/216 (58%), Gaps = 30/216 (13%)
Query: 39 DMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGG 98
DMH+YLSQD+D G +KDT +IGSAYDRYLQS Q S EA F+G + R GG
Sbjct: 211 DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQ--GG 268
Query: 99 VTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQL-PFDAAARPGHETLPLPPDASSTLY 157
+P PS+ G L + R + D D+ RPG E PLPPD S+TLY
Sbjct: 269 SNMMP--GPSMGELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLY 326
Query: 158 VEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSA 217
VEGLP++ ++RE R GDP +LCFVDFEN ACAATALSA
Sbjct: 327 VEGLPSNCSRRE-----------------------RSGDPTVLCFVDFENSACAATALSA 363
Query: 218 LQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
LQ YRMDED+PDSK LRLQF RNPGPR G RG R
Sbjct: 364 LQDYRMDEDEPDSKILRLQFFRNPGPRP--GQRGGR 397
>gi|293331463|ref|NP_001168957.1| uncharacterized protein LOC100382777 [Zea mays]
gi|223974013|gb|ACN31194.1| unknown [Zea mays]
Length = 287
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 135/236 (57%), Gaps = 17/236 (7%)
Query: 20 LKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFT 79
LKR R D+ +V DM Y ++ D L++ T+G++YDRYL++
Sbjct: 67 LKRARPDF----GDVSGGQDMTGYYPRETDRSGYHSLRENDTLGASYDRYLRN------- 115
Query: 80 SGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSID--DQLPFDA 137
G AS + D R A G ++ G V R + D
Sbjct: 116 -GMASVGANDTSRAAGMGAGLAAGMTAGMGAGMAAGMAGYGVDGQRMMGVVGMDSRGMGY 174
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
RP PLPPDASSTLY+EGLPA+ T+REV+HIFRPFVG++EVRLV KES+ GGDP
Sbjct: 175 GGRP---EPPLPPDASSTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDP 231
Query: 198 LILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
+LCFVDF+NPA A AL ALQGY+ DE + DS LRLQFSR PGPRS G RGRR
Sbjct: 232 HVLCFVDFDNPAQATIALEALQGYKFDEHERDSAHLRLQFSRFPGPRSAGGPRGRR 287
>gi|222640974|gb|EEE69106.1| hypothetical protein OsJ_28175 [Oryza sativa Japonica Group]
Length = 268
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 131/235 (55%), Gaps = 28/235 (11%)
Query: 20 LKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFT 79
LKR R DY +V + DM Y ++ D L++ IG++YDRYL++ S
Sbjct: 61 LKRARPDY----GDVPAGQDMTGYYPRETDRTGYHALRENEAIGASYDRYLRNGMPS--- 113
Query: 80 SGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSID-DQLPFDAA 138
V T PV P V + R + D
Sbjct: 114 ---------------VAATETNRPVVGGMGGMGGMGGYP--VDDRRMIGVGMDSRGMGYG 156
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
ARP PLP DASSTLYVEGLPA+ T+REV+HIFRPFVG++EVRLV KES+ GGDP
Sbjct: 157 ARP---EPPLPADASSTLYVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPH 213
Query: 199 ILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
+LCFVDF+NPA A AL ALQGY+ DE D DS LRLQFSR PGPRS G RGRR
Sbjct: 214 VLCFVDFDNPAQATLALEALQGYKFDEHDRDSAHLRLQFSRFPGPRSAGGPRGRR 268
>gi|218201560|gb|EEC83987.1| hypothetical protein OsI_30140 [Oryza sativa Indica Group]
Length = 218
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 131/235 (55%), Gaps = 28/235 (11%)
Query: 20 LKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFT 79
LKR R DY +V + DM Y ++ D L++ IG++YDRYL++ S
Sbjct: 11 LKRARPDY----GDVPAGQDMTGYYPRETDRTGYHALRENEAIGASYDRYLRNGMPS--- 63
Query: 80 SGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSID-DQLPFDAA 138
V T PV P V + R + D
Sbjct: 64 ---------------VAATETNRPVVGGMGGMGGMGGYP--VDDRRMIGVGMDSRGMGYG 106
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
ARP PLP DASSTLYVEGLPA+ T+REV+HIFRPFVG++EVRLV KES+ GGDP
Sbjct: 107 ARP---EPPLPADASSTLYVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPH 163
Query: 199 ILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
+LCFVDF+NPA A AL ALQGY+ DE D DS LRLQFSR PGPRS G RGRR
Sbjct: 164 VLCFVDFDNPAQATLALEALQGYKFDEHDRDSAHLRLQFSRFPGPRSAGGPRGRR 218
>gi|413953430|gb|AFW86079.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
Length = 262
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 147/247 (59%), Gaps = 32/247 (12%)
Query: 13 LLPSGGM---LKRPR-SDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDR 68
+ P+GG +KRPR +++ S+V D Y +D++ + +DT ++ ++Y+R
Sbjct: 42 MAPAGGQQQPMKRPRPTEF----SDVPGAPDTAGYYPRDEERAGYRAARDTESLNASYER 97
Query: 69 YLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSS 128
+L++ Q SF G A G+ +R AV GG PV D S+ G + R+
Sbjct: 98 FLRTGQIQSFGGGHA----GEPIRPAV-GGNAAYPVDDRSMMAARG-------MDSRNIG 145
Query: 129 IDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIK 188
+P PLPPDAS+TLY+EG+P+D T+REV+HIFRPFVG++EVRLV K
Sbjct: 146 FVGGMP----------EPPLPPDASNTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNK 195
Query: 189 ESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPR--SV 246
E K GGDP++LCFVDF P +A AL ALQGY+ DE D +S LRLQF+R GP+ S
Sbjct: 196 EPKHPGGDPIVLCFVDFAEPTQSAIALDALQGYKFDEHDRNSPNLRLQFARFAGPKGNSG 255
Query: 247 FGARGRR 253
G RGRR
Sbjct: 256 PGGRGRR 262
>gi|26450151|dbj|BAC42194.1| unknown protein [Arabidopsis thaliana]
Length = 156
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 82/106 (77%), Positives = 93/106 (87%), Gaps = 2/106 (1%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LP DAS+TLYVEGLP++ ++REVAHIFRPFVGY+EVRLV K+SK R GDP++LCFVDF N
Sbjct: 53 LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTN 112
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
PACAATALSALQGYRMDE++ DSKFLRLQFSR PG R G RGRR
Sbjct: 113 PACAATALSALQGYRMDENESDSKFLRLQFSRKPGSRP--GQRGRR 156
>gi|357464013|ref|XP_003602288.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355491336|gb|AES72539.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 243
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/224 (45%), Positives = 138/224 (61%), Gaps = 32/224 (14%)
Query: 1 MADGYW----NRQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPL 56
M+D YW ++Q A G KRPR++YD V H++ NY DDD G LQ +
Sbjct: 1 MSDAYWRYAESQQHAPPTIPG---KRPRTEYD-----VSGVHNLANYFPHDDDRGRLQVI 52
Query: 57 KDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGAT 116
+DT ++ ++Y+RYL++A SS SG+++ R + GGV + D VT G
Sbjct: 53 RDTESLDASYERYLRNA-ISSHGSGQST--------RTIDGGVPSHSIDDSHVTSMGGVD 103
Query: 117 GPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRP 176
R +++ DQ+ + RP H LPP A++TL+VEGLP++ T+REVAHIFRP
Sbjct: 104 --------RRTNVKDQILELSGGRPDHS---LPPGATNTLFVEGLPSNCTRREVAHIFRP 152
Query: 177 FVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQG 220
FVGYKEVRLV KES+ GGDPL+LCFVDF +PA AATA+ AL G
Sbjct: 153 FVGYKEVRLVSKESRQPGGDPLLLCFVDFVSPAHAATAMDALHG 196
>gi|223973687|gb|ACN31031.1| unknown [Zea mays]
Length = 221
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 147/247 (59%), Gaps = 32/247 (12%)
Query: 13 LLPSGGM---LKRPR-SDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDR 68
+ P+GG +KRPR +++ S+V D Y +D++ + +DT ++ ++Y+R
Sbjct: 1 MAPAGGQQQPMKRPRPTEF----SDVPGAPDTAGYYPRDEERAGYRAARDTESLNASYER 56
Query: 69 YLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSS 128
+L++ Q SF G A G+ +R AV GG PV D S+ G + R+
Sbjct: 57 FLRTGQIQSFGGGHA----GEPIRPAV-GGNAAYPVDDRSMMAARG-------MDSRNIG 104
Query: 129 IDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIK 188
+P PLPPDAS+TLY+EG+P+D T+REV+HIFRPFVG++EVRLV K
Sbjct: 105 FVGGMP----------EPPLPPDASNTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNK 154
Query: 189 ESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPR--SV 246
E K GGDP++LCFVDF P +A AL ALQGY+ DE D +S LRLQF+R GP+ S
Sbjct: 155 EPKHPGGDPIVLCFVDFAEPTQSAIALDALQGYKFDEHDRNSPNLRLQFARFAGPKGNSG 214
Query: 247 FGARGRR 253
G RGRR
Sbjct: 215 PGGRGRR 221
>gi|334183951|ref|NP_001185414.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332197786|gb|AEE35907.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 179
Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 82/106 (77%), Positives = 93/106 (87%), Gaps = 2/106 (1%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LP DAS+TLYVEGLP++ ++REVAHIFRPFVGY+EVRLV K+SK R GDP++LCFVDF N
Sbjct: 76 LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTN 135
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
PACAATALSALQGYRMDE++ DSKFLRLQFSR PG R G RGRR
Sbjct: 136 PACAATALSALQGYRMDENESDSKFLRLQFSRKPGSRP--GQRGRR 179
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDY 27
MADGYWN+Q+ P GG +KRPRSD+
Sbjct: 1 MADGYWNQQRQQHHPPGGPMKRPRSDF 27
>gi|116781380|gb|ABK22075.1| unknown [Picea sitchensis]
Length = 265
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 148/262 (56%), Gaps = 15/262 (5%)
Query: 1 MADGYWNRQQASLLPSGGML----KRPRSDYDLPPSEVLSRHDMHNYLSQDD---DLGEL 53
M D YWNR A L KRPR++YDL S D YL ++D D
Sbjct: 1 MGDTYWNRFAAERDGRSAALASAAKRPRNEYDLLTS---GSRDGPGYLPREDPRLDERSR 57
Query: 54 QPLKDTSTIGSAYDRYLQSAQYSSFTSG---EASAFSGDRLRRAVPGGVTRLPVSDPSVT 110
+ L++T +G AY+RY ++ S +SG G L R+ G+ + D +
Sbjct: 58 RLLRETDPLGPAYERYARNGLPSYGSSGLNAGDLGGLGMGLGRSAGSGLGGSALDDQVLM 117
Query: 111 GRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREV 170
GR + L + D D RP ++ LP PDAS+TL+VEGLP T+RE
Sbjct: 118 GRRLSMDAGLGGKGQGLGFKDSQLRDPLRRPDNDHLP--PDASNTLFVEGLPPKCTRREA 175
Query: 171 AHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDS 230
AHIFRPFVG+KEVRLV KE++ GG+PL+LCFVDF NP CAATA+ ALQGY+ DE++ +S
Sbjct: 176 AHIFRPFVGFKEVRLVNKEARNPGGEPLVLCFVDFANPNCAATAMEALQGYKFDENEKES 235
Query: 231 KFLRLQFSRNPGPRSVFGARGR 252
L+LQF+R PGPR + GR
Sbjct: 236 PSLKLQFARYPGPRGGGSSFGR 257
>gi|326499832|dbj|BAJ90751.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501246|dbj|BAJ98854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 135/236 (57%), Gaps = 27/236 (11%)
Query: 20 LKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFT 79
LKR R DY P +M Y +++ L+D IG++YDRYL++ S
Sbjct: 73 LKRARPDYGDGPGG----QEMAGYYPREN--AGYHSLRDNEAIGASYDRYLRNGM-PSVA 125
Query: 80 SGEAS--AFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDA 137
+ E S V GG++ PV D + G G D
Sbjct: 126 ANEPSRAVVGAMGGAAMVGGGMSGYPVDDRRMMGVVGM---------------DSRAMGY 170
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
ARP PLPPDAS+TLY+EGLPA+ T+REV+HIFRPFVG++EVRLV KES+ GGDP
Sbjct: 171 GARP---EPPLPPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDP 227
Query: 198 LILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
+LCFVDF++PA A AL ALQGY+ DE D +S LRLQFSR PGPRS G RGRR
Sbjct: 228 HVLCFVDFDSPAQATIALEALQGYKFDEHDRESAHLRLQFSRFPGPRSAGGPRGRR 283
>gi|242091796|ref|XP_002436388.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
gi|241914611|gb|EER87755.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
Length = 266
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 132/221 (59%), Gaps = 27/221 (12%)
Query: 20 LKRPR-SDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSF 78
+KRPR +D+ S+V DM Y +D++ +P +DT + ++Y+R+L++ Q SF
Sbjct: 55 MKRPRPADF----SDVPGAPDMTGYYPRDEERAGYRPARDTEALNASYERFLRTGQIQSF 110
Query: 79 TSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAA 138
G A G+ +R AV GG PV D S+ G + R+ +P
Sbjct: 111 GGGPA----GEPIRPAV-GGNAGYPVDDRSMMAARG-------MDSRNIGFGGGMP---- 154
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
PLPPDAS+TLY+EG+P T+REV+HIFRPFVG++EVRLV KE K GGDP+
Sbjct: 155 ------EPPLPPDASNTLYIEGIPTGCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPI 208
Query: 199 ILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
+LCFVDF P +A A+ ALQGY+ DE D +S LRLQF+R
Sbjct: 209 VLCFVDFAEPTQSAIAMEALQGYKFDEHDRNSPNLRLQFAR 249
>gi|242081967|ref|XP_002445752.1| hypothetical protein SORBIDRAFT_07g025090 [Sorghum bicolor]
gi|241942102|gb|EES15247.1| hypothetical protein SORBIDRAFT_07g025090 [Sorghum bicolor]
Length = 203
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 127/218 (58%), Gaps = 19/218 (8%)
Query: 40 MHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGV 99
M Y ++ D L+D IG++YDRYL++ G AS + D R A G
Sbjct: 1 MTGYYPRETDRAGYHSLRDNDAIGASYDRYLRN--------GMASVGANDTTRAAGMGAG 52
Query: 100 TRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQ----LPFDAAARPGHETLPLPPDASST 155
++ G + + +DD+ + RP PLPPDAS T
Sbjct: 53 MGAGMAAGMGA----GMGAAMGAGMAGYGVDDRRMMGVGMGYGGRP---EPPLPPDASPT 105
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
LY+EGLPA+ T+REV+HIFRPFVG++EVRLV KES+ GGDP +LCFVDF+NPA A AL
Sbjct: 106 LYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATIAL 165
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
ALQGY+ DE D DS LRLQFSR PGPRS G RGRR
Sbjct: 166 EALQGYKFDEHDRDSAHLRLQFSRFPGPRSAGGPRGRR 203
>gi|357148760|ref|XP_003574884.1| PREDICTED: uncharacterized protein LOC100836479 [Brachypodium
distachyon]
Length = 296
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 136/234 (58%), Gaps = 18/234 (7%)
Query: 20 LKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFT 79
LKR R DY P DM Y +++ L+D +G++YDRYL++
Sbjct: 81 LKRARPDYVDGPGG----QDMAGYYPREN--AGYHSLRDNEVLGASYDRYLRNG------ 128
Query: 80 SGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAA 139
A + + RAV GG+ + + G + P + + D A
Sbjct: 129 ---VPAVAVNEPSRAVVGGMGGAGMGGAGMVGAGMSGYPGDERRMMGVVGMDSRGMGYGA 185
Query: 140 RPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI 199
RP PLPPDAS+TLY+EGLPA+ T+REV+HIFRPFVG++EVRLV KES+ GGDP +
Sbjct: 186 RP---EPPLPPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHV 242
Query: 200 LCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
LCFVDF++PA A AL ALQGY+ DE D +S LRLQFSR PGPRS G RGRR
Sbjct: 243 LCFVDFDSPAQATIALEALQGYKFDEHDRESAHLRLQFSRFPGPRSAGGPRGRR 296
>gi|222634881|gb|EEE65013.1| hypothetical protein OsJ_19964 [Oryza sativa Japonica Group]
Length = 265
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 133/224 (59%), Gaps = 23/224 (10%)
Query: 17 GGMLKRPR-SDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQY 75
G LKRPR +D+ S+V +M Y S+D++ +P +DT + ++Y+R+L++ Q
Sbjct: 47 GQPLKRPRPADF----SDVPGAPEMAGYYSRDEERPGYRPARDTEALNASYERFLRTGQI 102
Query: 76 SSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPF 135
S+ +G + + +R A GG PV D + G R+ +P
Sbjct: 103 QSYGAGAGAGPGAESIRPAA-GGNAGYPVEDRPMMAGGG-------MEARNIGFGGGMP- 153
Query: 136 DAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGG 195
PLPPDAS+TL++EG+P D +REV+HIFRPFVG++EVRLV KE++ GG
Sbjct: 154 ---------EPPLPPDASNTLFIEGIPTDCARREVSHIFRPFVGFREVRLVSKEARHPGG 204
Query: 196 DPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
DP++LCFVDFE + AA A+ ALQGY+ DE D +S LRLQF+R
Sbjct: 205 DPILLCFVDFETASQAAIAMDALQGYKFDEHDRNSPHLRLQFAR 248
>gi|116781833|gb|ABK22259.1| unknown [Picea sitchensis]
Length = 274
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 83/102 (81%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPPDAS+TL+VEGLPAD T+RE AHIFRPF+G+KEVRLV KE + GGDPL+LCFVDF +
Sbjct: 152 LPPDASNTLFVEGLPADCTRREAAHIFRPFIGFKEVRLVQKEPRRPGGDPLVLCFVDFTD 211
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGA 249
CAATAL ALQGY+ DE D +S LRLQF+R PGPR G+
Sbjct: 212 ARCAATALEALQGYKFDETDRESTGLRLQFARFPGPRGPSGS 253
>gi|413953429|gb|AFW86078.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
Length = 130
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 86/109 (78%), Gaps = 2/109 (1%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
PLPPDAS+TLY+EG+P+D T+REV+HIFRPFVG++EVRLV KE K GGDP++LCFVDF
Sbjct: 22 PLPPDASNTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFA 81
Query: 207 NPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPR--SVFGARGRR 253
P +A AL ALQGY+ DE D +S LRLQF+R GP+ S G RGRR
Sbjct: 82 EPTQSAIALDALQGYKFDEHDRNSPNLRLQFARFAGPKGNSGPGGRGRR 130
>gi|115466130|ref|NP_001056664.1| Os06g0127500 [Oryza sativa Japonica Group]
gi|25553563|dbj|BAC24834.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|55295879|dbj|BAD67747.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113594704|dbj|BAF18578.1| Os06g0127500 [Oryza sativa Japonica Group]
Length = 293
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 132/252 (52%), Gaps = 51/252 (20%)
Query: 17 GGMLKRPR-SDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQY 75
G LKRPR +D+ S+V +M Y S+D++ +P +DT + ++Y+R+L++ Q
Sbjct: 47 GQPLKRPRPADF----SDVPGAPEMAGYYSRDEERPGYRPARDTEALNASYERFLRTGQI 102
Query: 76 SSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPF 135
S+ +G + + +R A GG PV D + G R+ +P
Sbjct: 103 QSYGAGAGAGPGAESIRPAA-GGNAGYPVEDRPMMAGGGMEA-------RNIGFGGGMP- 153
Query: 136 DAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHI---------------------- 173
PLPPDAS+TL++EG+P D +REV+ I
Sbjct: 154 ---------EPPLPPDASNTLFIEGIPTDCARREVSRILKSHAFFCLSLIFHLHKFCWSF 204
Query: 174 ------FRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDD 227
FRPFVG++EVRLV KE++ GGDP++LCFVDFE + AA A+ ALQGY+ DE D
Sbjct: 205 TFPQDIFRPFVGFREVRLVSKEARHPGGDPILLCFVDFETASQAAIAMDALQGYKFDEHD 264
Query: 228 PDSKFLRLQFSR 239
+S LRLQF+R
Sbjct: 265 RNSPHLRLQFAR 276
>gi|313761403|gb|ADR79706.1| RNA binding protein U620 [Marsilea vestita]
Length = 118
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 82/107 (76%), Gaps = 5/107 (4%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
DA+STLYVEG+PAD ++RE AHIFRPFVG+KEVRLV K++K GGD +LCFVDF +P C
Sbjct: 1 DATSTLYVEGVPADCSRREAAHIFRPFVGFKEVRLVRKDAKRPGGDQFVLCFVDFTDPKC 60
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSR----NPGPRSVF-GARGR 252
A+ AL ALQGY+ DE D +S+ LRLQ+SR PGPR F G R R
Sbjct: 61 ASIALEALQGYKFDETDRNSETLRLQYSRFPGSRPGPRDSFRGGRDR 107
>gi|168024982|ref|XP_001765014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683823|gb|EDQ70230.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 78/97 (80%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPPDASSTL+V+GLP D ++RE AHIFRPF+G+KEVRLV K++K G ++LCFV+F +
Sbjct: 62 LPPDASSTLFVDGLPQDCSRREAAHIFRPFIGFKEVRLVHKDAKRADGGKVVLCFVEFAD 121
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPR 244
CAATAL ALQGY+ DE D +S LRL F+R+PGPR
Sbjct: 122 ARCAATALEALQGYKFDETDHESYVLRLTFARHPGPR 158
>gi|302760451|ref|XP_002963648.1| hypothetical protein SELMODRAFT_69289 [Selaginella moellendorffii]
gi|300168916|gb|EFJ35519.1| hypothetical protein SELMODRAFT_69289 [Selaginella moellendorffii]
Length = 92
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 76/92 (82%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LP DASSTL+V+GLP+D T+RE AHIFRPF+G+KEVRLV K++K G+ L+LCFV+F +
Sbjct: 1 LPHDASSTLFVDGLPSDCTRREAAHIFRPFIGFKEVRLVHKDAKRTTGEKLVLCFVEFMD 60
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
CAATAL ALQGY+ DE+DPDS LRL F+R
Sbjct: 61 AKCAATALEALQGYKFDENDPDSYVLRLTFAR 92
>gi|302785932|ref|XP_002974737.1| hypothetical protein SELMODRAFT_59352 [Selaginella moellendorffii]
gi|300157632|gb|EFJ24257.1| hypothetical protein SELMODRAFT_59352 [Selaginella moellendorffii]
Length = 92
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 76/92 (82%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LP DASSTL+V+GLP+D T+RE AHIFRPF+G+KEVRLV K++K G+ L+LCFV+F +
Sbjct: 1 LPHDASSTLFVDGLPSDCTRREAAHIFRPFIGFKEVRLVHKDAKRATGEKLVLCFVEFMD 60
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
CAATAL ALQGY+ DE+DPDS LRL F+R
Sbjct: 61 AKCAATALEALQGYKFDENDPDSYVLRLTFAR 92
>gi|326533746|dbj|BAK05404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 115/204 (56%), Gaps = 27/204 (13%)
Query: 39 DMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGG 98
+M Y +D++ ++DT + ++Y+R+L++ Q S +G A GG
Sbjct: 62 EMAGYYPRDEERPGYAAVRDTQALNASYERFLRTGQIQSHGAGPA-------------GG 108
Query: 99 VTRLPVSDPSVTGRHGATGPDLV---QNLRSSSIDDQLPFDAAARPGHETLPLPPDASST 155
R P + S G P + N R+ +P PLPPDAS+T
Sbjct: 109 SVR-PAAGVSAGGYQADDRPGMAAGGMNGRNVGFGGGMP----------EPPLPPDASNT 157
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++EG+P D +REV+HIFRPFVG++EVRLV KE + GGDP++LCFVDF N A AA A+
Sbjct: 158 LFIEGIPTDCERREVSHIFRPFVGFQEVRLVNKEPRHPGGDPIVLCFVDFANAAQAAIAM 217
Query: 216 SALQGYRMDEDDPDSKFLRLQFSR 239
ALQGY+ DE D S LRLQF+R
Sbjct: 218 EALQGYKFDEHDRSSPQLRLQFAR 241
>gi|357110599|ref|XP_003557104.1| PREDICTED: uncharacterized protein LOC100821534 [Brachypodium
distachyon]
Length = 261
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 125/227 (55%), Gaps = 35/227 (15%)
Query: 20 LKRPR-SDYDLPPSEVLSRHDMHNYLSQDDDLG------ELQPLKDTSTIGSAYDRYLQS 72
LKRPR ++Y S+V +M Y +D++ +DT + ++Y+RYL++
Sbjct: 44 LKRPRPAEY----SDVPGSSEMAGYYPRDEERAGYAAAAAAAAARDTQALNASYERYLRT 99
Query: 73 AQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQ 132
Q S +G A G +R A G + D G G G R+
Sbjct: 100 GQIQSHGAGPA----GGSIRPAA-GANAGYQLDDRVAIG--GVEG-------RNVGFGTG 145
Query: 133 LPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKL 192
+P PLPPDAS+TL++EG+P D +REV+HIFRPFVG+KEVRLV KE +
Sbjct: 146 MP----------EPPLPPDASNTLFIEGIPNDCERREVSHIFRPFVGFKEVRLVTKEPRH 195
Query: 193 RGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
GGDP++LCFVDF N A AA A+ ALQGY+ DE D S LRLQF+R
Sbjct: 196 PGGDPIVLCFVDFTNAAQAAVAMEALQGYKFDEHDRTSPHLRLQFAR 242
>gi|125553883|gb|EAY99488.1| hypothetical protein OsI_21456 [Oryza sativa Indica Group]
Length = 227
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 119/228 (52%), Gaps = 46/228 (20%)
Query: 40 MHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGV 99
M Y S+D++ +P +DT + ++Y+R+L++ Q S+ +G + + +R A GG
Sbjct: 1 MAGYYSRDEERPGYRPARDTEALNASYERFLRTGQIQSYGAGAGAGPGAESIRPAA-GGN 59
Query: 100 TRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVE 159
PV D + G R+ +P PLPPDAS+TL++E
Sbjct: 60 AGYPVEDRPMMAGGG-------MEARNIGFGGGMP----------EPPLPPDASNTLFIE 102
Query: 160 GLPADSTKREVAHI----------------------------FRPFVGYKEVRLVIKESK 191
G+P D +REV+ I FRPFVG++EVRLV KE++
Sbjct: 103 GIPTDCARREVSRILKSHAFFCLSLIFHLHKFCWSFTFPQDIFRPFVGFREVRLVSKEAR 162
Query: 192 LRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
GGDP++LCFVDFE + AA A+ ALQGY+ DE D +S LRLQF+R
Sbjct: 163 HPGGDPILLCFVDFETASQAAIAMDALQGYKFDEHDRNSPHLRLQFAR 210
>gi|115477659|ref|NP_001062425.1| Os08g0547000 [Oryza sativa Japonica Group]
gi|42408101|dbj|BAD09242.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|42408712|dbj|BAD09930.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113624394|dbj|BAF24339.1| Os08g0547000 [Oryza sativa Japonica Group]
gi|215767903|dbj|BAH00132.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 294
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 109/203 (53%), Gaps = 30/203 (14%)
Query: 20 LKRPRSDY-DLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSF 78
LKR R DY D+P + DM Y ++ D L++ IG++YDRYL++ S
Sbjct: 61 LKRARPDYGDVPAGQ-----DMTGYYPRETDRTGYHALRENEAIGASYDRYLRNGMPS-- 113
Query: 79 TSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQ-LPFDA 137
V T PV P + + +D + + + A
Sbjct: 114 ----------------VAATETNRPVVGGMGGMGGMGGYPVDDRRMIGVGMDSRGMGYGA 157
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
P PLP DASSTLYVEGLPA+ T+REV+HIFRPFVG++EVRLV KES+ GGDP
Sbjct: 158 RPEP-----PLPADASSTLYVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDP 212
Query: 198 LILCFVDFENPACAATALSALQG 220
+LCFVDF+NPA A AL ALQG
Sbjct: 213 HVLCFVDFDNPAQATLALEALQG 235
>gi|326490583|dbj|BAJ89959.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 333
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 111/203 (54%), Gaps = 27/203 (13%)
Query: 20 LKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFT 79
LKR R DY P +M Y +++ L+D IG++YDRYL++ S
Sbjct: 73 LKRARPDYGDGPGG----QEMAGYYPREN--AGYHSLRDNEAIGASYDRYLRNGM-PSVA 125
Query: 80 SGEAS--AFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDA 137
+ E S V GG++ PV D + G G D
Sbjct: 126 ANEPSRAVVGAMGGAAMVGGGMSGYPVDDRRMMGVVGM---------------DSRAMGY 170
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
ARP PLPPDAS+TLY+EGLPA+ T+REV+HIFRPFVG++EVRLV KES+ GGDP
Sbjct: 171 GARP---EPPLPPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDP 227
Query: 198 LILCFVDFENPACAATALSALQG 220
+LCFVDF++PA A AL ALQG
Sbjct: 228 HVLCFVDFDSPAQATIALEALQG 250
>gi|162462145|ref|NP_001105534.1| meg5 protein [Zea mays]
gi|47078331|gb|AAT09814.1| MEG5 [Zea mays]
Length = 163
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 68/79 (86%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
PLPPDASSTLY+EGLPA+ T+REV+HIFRPFVG++EVRLV KES+ GGDP +LCFVDF+
Sbjct: 31 PLPPDASSTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFD 90
Query: 207 NPACAATALSALQGYRMDE 225
NPA A AL ALQG+ D+
Sbjct: 91 NPAQATIALEALQGHVTDD 109
>gi|224088786|ref|XP_002308540.1| predicted protein [Populus trichocarpa]
gi|222854516|gb|EEE92063.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 94/162 (58%), Gaps = 30/162 (18%)
Query: 94 AVPGGVTR---LPVSDPSVTGRHG-------ATGPDLVQNLRSSSIDDQLPFDAAARPGH 143
A+PG + P+ DPS+ + G A PD++ + RPG
Sbjct: 116 AIPGSTGKGYPSPLEDPSLLSQRGDASVRVTAAIPDMIND----------------RPGS 159
Query: 144 ----ETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI 199
+ P+P S+ L+V+GLP D T+REV H+FRPF+GYKE+R+V KE++ G +
Sbjct: 160 LRSADGPPVPKGESNILFVDGLPTDCTRREVGHLFRPFIGYKEIRVVHKEARKSGDRATV 219
Query: 200 LCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
LCFV+F + CAATA+ ALQGY+ D+ PDS L++QF+R P
Sbjct: 220 LCFVEFTDANCAATAMEALQGYKFDDKKPDSPTLKIQFARFP 261
>gi|224286216|gb|ACN40817.1| unknown [Picea sitchensis]
Length = 308
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
P ++S+T+++EGLPAD ++REVAHIFRPF+GYK+++++ KE + GG+P +LCFV+F +
Sbjct: 199 PDESSNTIFIEGLPADCSRREVAHIFRPFIGYKQIKVIHKEPRRAGGEPYVLCFVEFTDA 258
Query: 209 ACAATALSALQGYRMDEDDPD-SKFLRLQFSRNPGPR 244
CA TALSAL+GY+ DE + D S L+LQ + PG R
Sbjct: 259 KCALTALSALKGYKFDEHEHDSSSSLKLQLANFPGSR 295
>gi|225429574|ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
vinifera]
gi|296081671|emb|CBI20676.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 89/144 (61%), Gaps = 17/144 (11%)
Query: 103 PVSDPSVTGR-----HGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLY 157
PV DP++ G+ HG + P + R SS + E+LP P S+ L+
Sbjct: 95 PVEDPNLIGQRRDVAHGIS-PGIPDIERPSSFGNV-----------ESLPPPVQESNILF 142
Query: 158 VEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSA 217
V+GLP D T+REV H+FRPF+G+KE+R+V KE + G ++LCFV+F + +C+ TAL A
Sbjct: 143 VDGLPKDCTRREVGHLFRPFIGFKEIRVVHKEPRHSGDKAMVLCFVEFNDASCSRTALEA 202
Query: 218 LQGYRMDEDDPDSKFLRLQFSRNP 241
LQGY+ D+ PDS LR+QF+ P
Sbjct: 203 LQGYKFDDKKPDSPTLRIQFAHFP 226
>gi|115480271|ref|NP_001063729.1| Os09g0527100 [Oryza sativa Japonica Group]
gi|113631962|dbj|BAF25643.1| Os09g0527100 [Oryza sativa Japonica Group]
Length = 149
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 80/142 (56%), Gaps = 18/142 (12%)
Query: 124 LRSSSIDDQLPFDAAARPGHETLPLPPDA-----------------SSTLYVEGLPADST 166
L S ++DQL A +PL A S TLYVEGLP++ T
Sbjct: 4 LYSHHLNDQLQMSYVAGTNQSAIPLGGMARYSVGMDSGIHGATRTESRTLYVEGLPSNCT 63
Query: 167 KREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDED 226
KREVAHIFRPF G++EVRLV KES+ G +LCFVDF +P A AL LQGY+ DE
Sbjct: 64 KREVAHIFRPFSGFREVRLVNKESR-HAGSCNLLCFVDFSSPPEARAALETLQGYKFDEH 122
Query: 227 DPDSKFLRLQFSRNPGPRSVFG 248
D +S LR QFS P RS+ G
Sbjct: 123 DHESSNLRTQFSLTPRRRSIGG 144
>gi|224033783|gb|ACN35967.1| unknown [Zea mays]
Length = 331
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 75/114 (65%), Gaps = 11/114 (9%)
Query: 128 SIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVI 187
+I + +P+ A P LPPDA++T+YVEGLP + T+REVAHIFR ++G+ E+RLV
Sbjct: 221 NIHNGVPYFGAPEPS-----LPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVN 275
Query: 188 KESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
K S LCFVDF PA A A+ LQGY+ DE DP S+ L LQFSR+P
Sbjct: 276 KGSNKH------LCFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRSP 323
>gi|293334753|ref|NP_001168219.1| hypothetical protein [Zea mays]
gi|223946801|gb|ACN27484.1| unknown [Zea mays]
gi|414591373|tpg|DAA41944.1| TPA: hypothetical protein ZEAMMB73_165038 [Zea mays]
Length = 441
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 75/114 (65%), Gaps = 11/114 (9%)
Query: 128 SIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVI 187
+I + +P+ A P LPPDA++T+YVEGLP + T+REVAHIFR ++G+ E+RLV
Sbjct: 331 NIHNGVPYFGAPEPS-----LPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVN 385
Query: 188 KESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
K S LCFVDF PA A A+ LQGY+ DE DP S+ L LQFSR+P
Sbjct: 386 KGSNKH------LCFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRSP 433
>gi|414591374|tpg|DAA41945.1| TPA: hypothetical protein ZEAMMB73_165038 [Zea mays]
Length = 469
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 75/114 (65%), Gaps = 11/114 (9%)
Query: 128 SIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVI 187
+I + +P+ A P LPPDA++T+YVEGLP + T+REVAHIFR ++G+ E+RLV
Sbjct: 331 NIHNGVPYFGAPEPS-----LPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVN 385
Query: 188 KESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
K S LCFVDF PA A A+ LQGY+ DE DP S+ L LQFSR+P
Sbjct: 386 KGSNKH------LCFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRSP 433
>gi|215707027|dbj|BAG93487.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 135
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
S TLYVEGLP++ TKREVAHIFRPF G++EVRLV KES+ G +LCFVDF +P A
Sbjct: 36 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESR-HAGSCNLLCFVDFSSPPEAR 94
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFG 248
AL LQGY+ DE D +S LR QFS P RS+ G
Sbjct: 95 AALETLQGYKFDEHDHESSNLRTQFSLTPRRRSIGG 130
>gi|218202488|gb|EEC84915.1| hypothetical protein OsI_32114 [Oryza sativa Indica Group]
gi|222641952|gb|EEE70084.1| hypothetical protein OsJ_30080 [Oryza sativa Japonica Group]
Length = 119
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
S TLYVEGLP++ TKREVAHIFRPF G++EVRLV KES+ G +LCFVDF +P A
Sbjct: 20 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESR-HAGSCNLLCFVDFSSPPEAR 78
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFG 248
AL LQGY+ DE D +S LR QFS P RS+ G
Sbjct: 79 AALETLQGYKFDEHDHESSNLRTQFSLTPRRRSIGG 114
>gi|215693881|dbj|BAG89080.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 119
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
S TLYVEGLP++ TKREVAHIFRPF G++EVRLV KES+ G +LCFVDF +P A
Sbjct: 20 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESR-HAGSCNLLCFVDFSSPPEAR 78
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFG 248
AL LQGY+ DE D +S LR QFS P RS+ G
Sbjct: 79 AALETLQGYKFDEHDHESSNLRTQFSLTPRRRSIGG 114
>gi|115480273|ref|NP_001063730.1| Os09g0527500 [Oryza sativa Japonica Group]
gi|52077323|dbj|BAD46364.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113631963|dbj|BAF25644.1| Os09g0527500 [Oryza sativa Japonica Group]
gi|218202489|gb|EEC84916.1| hypothetical protein OsI_32115 [Oryza sativa Indica Group]
gi|222641953|gb|EEE70085.1| hypothetical protein OsJ_30081 [Oryza sativa Japonica Group]
Length = 235
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
S TLYVEGLP++ TKREVAHIFRPF G++EVRLV KE + G +LCFVDF +P A
Sbjct: 136 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKEIR-HAGSCNLLCFVDFSSPPEAR 194
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGR 252
AL LQGY+ DE D +S LR+QFS P R + G R R
Sbjct: 195 AALETLQGYKFDEHDHESSNLRIQFSLTPRRRPIGGPRVR 234
>gi|357465775|ref|XP_003603172.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355492220|gb|AES73423.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 229
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 72/105 (68%)
Query: 137 AAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGD 196
+ ++ ++ LP+ S+ L+V GLP D T+REV H+FRPF+GYK++++V KE + G
Sbjct: 116 SISKSNYDALPVSAAESNILFVGGLPKDCTRREVGHLFRPFIGYKDIKVVHKEPRRSGDK 175
Query: 197 PLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+I CFV+F P CA TA+ ALQGY+ D+ PDS L+++F+ P
Sbjct: 176 AMIFCFVEFTEPKCALTAMEALQGYKFDDKKPDSPTLKIKFAHFP 220
>gi|357110782|ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823400 [Brachypodium
distachyon]
Length = 209
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 66/91 (72%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D S+ L+V+GLP D +REVAH+FRPFVG+K++RLV KE + G +LCFV+F + C
Sbjct: 103 DESNILFVDGLPTDCKRREVAHLFRPFVGFKDLRLVHKEPRRSGDKAYVLCFVEFNDAKC 162
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A TA+ ALQ YR DE PD+ L++QF+R P
Sbjct: 163 AFTAMQALQEYRFDERKPDAPVLKIQFARFP 193
>gi|356514689|ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809186 [Glycine max]
Length = 228
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 72/104 (69%)
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
A++ ++ LP+ S+ L+V GLP D T+REV H+FRPF+GYK++R+V KE + G
Sbjct: 105 ASKSSYDGLPISAADSNILFVGGLPNDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKA 164
Query: 198 LILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+ LCFV+F + CA TA+ ALQGY+ D+ PDS L+++F+ P
Sbjct: 165 MTLCFVEFVDSKCALTAMEALQGYKFDDKKPDSPTLKIEFAHFP 208
>gi|242045360|ref|XP_002460551.1| hypothetical protein SORBIDRAFT_02g030530 [Sorghum bicolor]
gi|241923928|gb|EER97072.1| hypothetical protein SORBIDRAFT_02g030530 [Sorghum bicolor]
Length = 122
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 72/114 (63%), Gaps = 11/114 (9%)
Query: 128 SIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVI 187
++ D P+ A P LP DA+ST+YVEGLP + T+REVAHIFR ++G+ +RLV
Sbjct: 12 NLHDGFPYFGAPEPS-----LPRDATSTIYVEGLPTNCTRREVAHIFRQYMGFLGMRLVN 66
Query: 188 KESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
K S LCFVDF PA A A+ LQGYR DE DP S+ L+LQFS +P
Sbjct: 67 KGSNRH------LCFVDFATPAQAFLAMRTLQGYRFDEQDPHSRILKLQFSHSP 114
>gi|388521817|gb|AFK48970.1| unknown [Lotus japonicus]
Length = 229
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 67/89 (75%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
S+ L+V+ LP D T+REV H+FRPF+GYK++R+V KE + G ++LCFV+F++ CA
Sbjct: 129 SNVLFVDVLPRDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFDDSKCAL 188
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSRNP 241
TA+ ALQGY+ D+ PDS+ L++QF+ P
Sbjct: 189 TAMEALQGYKFDDKKPDSRTLKIQFAHFP 217
>gi|218197575|gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indica Group]
Length = 232
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 65/91 (71%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D S+ L+V+GLP D T+REVAH+FRPFVG+K++RLV KE + +LCFV+F + C
Sbjct: 125 DESNILFVDGLPTDCTRREVAHLFRPFVGFKDIRLVHKEPRHSSDRAYVLCFVEFSDAKC 184
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A TA+ ALQ YR DE PD+ L ++F+R P
Sbjct: 185 AITAMEALQEYRFDERKPDAAVLNIKFARFP 215
>gi|302771087|ref|XP_002968962.1| hypothetical protein SELMODRAFT_38126 [Selaginella moellendorffii]
gi|302816665|ref|XP_002990011.1| hypothetical protein SELMODRAFT_38125 [Selaginella moellendorffii]
gi|300142322|gb|EFJ09024.1| hypothetical protein SELMODRAFT_38125 [Selaginella moellendorffii]
gi|300163467|gb|EFJ30078.1| hypothetical protein SELMODRAFT_38126 [Selaginella moellendorffii]
Length = 73
Score = 106 bits (265), Expect = 9e-21, Method: Composition-based stats.
Identities = 47/73 (64%), Positives = 62/73 (84%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP+AS+TL+V+GLP D T+RE AHIFRPF+G+KEVR+V K++K G+ ++LCFV+F +
Sbjct: 1 LPPEASATLFVDGLPIDCTRREAAHIFRPFIGFKEVRVVHKDAKRAVGEKIVLCFVEFAD 60
Query: 208 PACAATALSALQG 220
P CAATAL ALQG
Sbjct: 61 PRCAATALEALQG 73
>gi|363807398|ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycine max]
gi|255647054|gb|ACU23995.1| unknown [Glycine max]
Length = 220
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 103 PVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLP 162
P++DP ++ + T P + N + D A++ ++ LP+ S+ L+V GLP
Sbjct: 74 PLADPCLSKKRDTT-PLGINN----GVPDVSSERPASKSSYDGLPISAADSNILFVGGLP 128
Query: 163 ADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYR 222
D T+REV H+FRPF+GYK++R+V KE + G + LCFV+F + CA TAL LQGY+
Sbjct: 129 KDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEFVDSNCALTALETLQGYK 188
Query: 223 MDEDDPDSKFLRLQFSRNP 241
D+ PDS L++Q + P
Sbjct: 189 FDDKKPDSPTLKIQPAHFP 207
>gi|294463261|gb|ADE77166.1| unknown [Picea sitchensis]
Length = 376
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 62/84 (73%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
L+++GLP D T RE AHIFRPF+G+KEVR+V KE K GG+ +LCFV+F + AA A
Sbjct: 268 VLFIDGLPLDCTVREAAHIFRPFIGFKEVRVVHKEPKRPGGEKSVLCFVEFTDLRHAAIA 327
Query: 215 LSALQGYRMDEDDPDSKFLRLQFS 238
ALQGY++DE DP+S LR+ FS
Sbjct: 328 REALQGYKVDEHDPNSGTLRISFS 351
>gi|449447147|ref|XP_004141330.1| PREDICTED: uncharacterized protein LOC101211987 [Cucumis sativus]
gi|449486681|ref|XP_004157367.1| PREDICTED: uncharacterized protein LOC101228687 [Cucumis sativus]
Length = 246
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 66/98 (67%)
Query: 144 ETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFV 203
E P P S+ L+V+GLP D T+REV H+FRPF+GYK++R+V KE + G ++LCFV
Sbjct: 138 ECDPSPLRESNVLFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRTGDKAMVLCFV 197
Query: 204 DFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+F + A+ ALQGY+ D+ PDS L++QF+ P
Sbjct: 198 EFVEAKFSQAAMEALQGYKFDDKKPDSPVLKIQFAHFP 235
>gi|255550095|ref|XP_002516098.1| conserved hypothetical protein [Ricinus communis]
gi|223544584|gb|EEF46100.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 94 AVPGGVTR---LPVSDPSV-TGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLP 149
+PG +R P++DPS+ + R T ++ I+DQ P R ++ +
Sbjct: 78 VIPGASSRGYLSPLNDPSLPSHRLRDTSVNVTTLAIPDVINDQPP--NYLRINADSPSVS 135
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPA 209
S+ L+V+GLP D T+REV H+FRPF+GYK+++++ +E + G ++ CFV+F +
Sbjct: 136 RTESNILFVDGLPTDCTRREVGHLFRPFIGYKDIKVIHREPRRDGDKAMVYCFVEFADAK 195
Query: 210 CAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
CA TA+ ALQGY+ D+ +S LR+ +R P
Sbjct: 196 CAITAMEALQGYKFDDRRSNSPVLRIHLARFP 227
>gi|307109197|gb|EFN57435.1| hypothetical protein CHLNCDRAFT_142904 [Chlorella variabilis]
Length = 529
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 65/91 (71%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PPDA +TLY+EGLP+D T+RE+ HIFR G++ +RLVIK+SK G+ L++ FV++ +
Sbjct: 422 PPDACNTLYIEGLPSDVTRRELGHIFRSREGFRSLRLVIKDSKKHVGEKLVMAFVEYSST 481
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
AA A+ LQGY D D+P++ ++F+R
Sbjct: 482 YFAAQAMDTLQGYPFDLDNPETMTFFVKFAR 512
>gi|226492197|ref|NP_001148276.1| LOC100281884 [Zea mays]
gi|195617106|gb|ACG30383.1| nucleic acid binding protein [Zea mays]
Length = 297
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
+ S+ L+V+ LP D T+REVAH+FR F G+K++R+V KE + G +LCFV+FEN
Sbjct: 190 NESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPRRSGDKAYVLCFVEFENAKF 249
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A T + ALQGYR D+ PD + L + F+R P
Sbjct: 250 ARTPMQALQGYRFDDRKPDDRCLEIHFARFP 280
>gi|403347348|gb|EJY73094.1| RRM domain containing protein [Oxytricha trifallax]
Length = 429
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 65/95 (68%), Gaps = 6/95 (6%)
Query: 144 ETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFV 203
LP+P +A++T+YVEGLP D+T+REVAHIFRPF+G+K++RL+ +++K G + F
Sbjct: 304 HNLPIPKNATNTVYVEGLPHDTTEREVAHIFRPFLGFKQLRLIPRDTK--DGQRVHFAFA 361
Query: 204 DFENPACAATALSALQGYRMDEDDPDSKFLRLQFS 238
DFE+ ++ LQGYR +DD + LQFS
Sbjct: 362 DFESVYQTTMVINTLQGYRFHKDD----IIGLQFS 392
>gi|303286151|ref|XP_003062365.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455882|gb|EEH53184.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 107
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 5/92 (5%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
DAS TLY+EG+P D+T RE+AHIFRPF G++ RLV KE+ +RG LCF +F
Sbjct: 14 DASPTLYIEGVPHDATVREIAHIFRPFDGFQSTRLVKKEN-VRGP----LCFAEFAGADL 68
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNPG 242
A AL+ LQGY +D DDP S LR+ F+++ G
Sbjct: 69 AFAALNTLQGYVLDRDDPKSPALRIVFAKSKG 100
>gi|440800677|gb|ELR21712.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 341
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Query: 114 GATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHI 173
G T D+ S++ F + +P + L PDA+ TLYVEGLP D+T+REVAHI
Sbjct: 195 GPTSLDMSGMQFYSTVAPNAQFASYVQPQAYSPQLSPDAAPTLYVEGLPLDATEREVAHI 254
Query: 174 FRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFL 233
FR GY +R+ KESK LC+V+FE AA AL L+GY+MD++ D+K L
Sbjct: 255 FRQMPGYLGIRIKPKESKQHPSRVFNLCWVEFETKYNAAVALHHLKGYKMDKN--DTKGL 312
Query: 234 RLQFSR 239
+ +++
Sbjct: 313 TISYAK 318
>gi|403345552|gb|EJY72148.1| hypothetical protein OXYTRI_06855 [Oxytricha trifallax]
Length = 425
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 19/110 (17%)
Query: 142 GHETLPLPPDASSTLYVEGLPADSTKREVAH-------------IFRPFVGYKEVRLVIK 188
G +P+P +A++T+YVEG+P D+++REVA IFRP+ G+K VRL+ +
Sbjct: 307 GPNIMPIPKNATNTVYVEGIPLDASEREVARKILSHFYQSFSLDIFRPYPGFKSVRLIPR 366
Query: 189 ESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFS 238
E K G+ +I CF DFEN ++ LQGYR D+DD L LQFS
Sbjct: 367 EKK--PGEKVIFCFADFENAFQTTLVINTLQGYRFDKDD----ILGLQFS 410
>gi|255075217|ref|XP_002501283.1| predicted protein [Micromonas sp. RCC299]
gi|226516547|gb|ACO62541.1| predicted protein [Micromonas sp. RCC299]
Length = 323
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
+AS TL++ G+P D+T RE+ HIFRPF G++ RLV + RG LCF +F NP
Sbjct: 229 NASPTLHISGVPKDATVREICHIFRPFDGFQSARLVPSKDPERG----PLCFAEFTNPEL 284
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A AL L+GY +D DDPDS L + F++N
Sbjct: 285 AFVALETLEGYLIDRDDPDSSALHIAFAKN 314
>gi|147810268|emb|CAN75823.1| hypothetical protein VITISV_004156 [Vitis vinifera]
Length = 441
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 144 ETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP-LILCF 202
E+LP S+ L+V+GLP T+REV H+F PF+ +KE+R+V KE + GD ++LCF
Sbjct: 322 ESLPPLVRESNILFVDGLPKYYTRREVGHLFLPFIDFKEIRVVHKEPRCNSGDKAMVLCF 381
Query: 203 VDFENPACAATALSALQGYRMDEDDPDSKFLRLQ 236
V+F + C+ TAL ALQGY + PDS L +Q
Sbjct: 382 VEFNDAKCSRTALEALQGYIFVDKKPDSPALGIQ 415
>gi|384247133|gb|EIE20621.1| hypothetical protein COCSUDRAFT_83539 [Coccomyxa subellipsoidea
C-169]
Length = 321
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP+A+ TL++ GLP TKREVAHI RP G+KE+RLV K R ++ CF +F +
Sbjct: 135 LPPEANPTLFLSGLPLKITKREVAHILRPCEGFKELRLVQKVD--RNNKDVMWCFAEFSS 192
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
AA A++ LQGY +D DD DS LR+ ++R
Sbjct: 193 KQLAARAMNDLQGYAVDLDDQDSPTLRISYAR 224
>gi|145499741|ref|XP_001435855.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402991|emb|CAK68458.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 63/91 (69%), Gaps = 4/91 (4%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D++ +LYV+G+P D+ +REVAHIFRP+ G++ VRL+ K+++ G +LCFVDF++
Sbjct: 30 DSTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIKKQTQ--KGREYLLCFVDFDDAFQ 87
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A + LQGYR D++D L++ F+ NP
Sbjct: 88 ATIVMQTLQGYRFDKNDKTG--LKIYFANNP 116
>gi|225429572|ref|XP_002280083.1| PREDICTED: uncharacterized protein LOC100257637 isoform 2 [Vitis
vinifera]
Length = 229
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 79/144 (54%), Gaps = 27/144 (18%)
Query: 103 PVSDPSVTGR-----HGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLY 157
PV DP++ G+ HG + P + R SS + E+LP P S+ L+
Sbjct: 95 PVEDPNLIGQRRDVAHGIS-PGIPDIERPSSFGNV-----------ESLPPPVQESNILF 142
Query: 158 VEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSA 217
V+GLP D T+REV ++R+V KE + G ++LCFV+F + +C+ TAL A
Sbjct: 143 VDGLPKDCTRREVG----------QIRVVHKEPRHSGDKAMVLCFVEFNDASCSRTALEA 192
Query: 218 LQGYRMDEDDPDSKFLRLQFSRNP 241
LQGY+ D+ PDS LR+QF+ P
Sbjct: 193 LQGYKFDDKKPDSPTLRIQFAHFP 216
>gi|229595477|ref|XP_001017208.3| hypothetical protein TTHERM_00194550 [Tetrahymena thermophila]
gi|225565995|gb|EAR96963.3| hypothetical protein TTHERM_00194550 [Tetrahymena thermophila
SB210]
Length = 616
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
+A+++LYV+G+P DS +REV+HIFRPF G++ VRL+ K ++ G CFVDFE+
Sbjct: 452 EATNSLYVDGVPIDSNEREVSHIFRPFPGFQAVRLIRKRTQ--AGREFYFCFVDFESALQ 509
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+ AL LQGYR D+ D L++ ++ P
Sbjct: 510 STIALRTLQGYRFDKKDTQG--LKISYANEP 538
>gi|145491995|ref|XP_001431996.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399103|emb|CAK64598.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%), Gaps = 4/91 (4%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
+++ +LYV+G+P D+ +REVAHIFRP+ G++ VRL+ K+++ G +LCFVDF++
Sbjct: 30 ESTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIKKQTQ--KGREYLLCFVDFDDALQ 87
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A + LQGYR D++D L++ F+ NP
Sbjct: 88 ATIVMQTLQGYRFDKNDKTG--LKIYFANNP 116
>gi|222634952|gb|EEE65084.1| hypothetical protein OsJ_20123 [Oryza sativa Japonica Group]
Length = 180
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 173 IFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKF 232
+FRPFVG+K++RLV KE + +LCFV+F + CA TA+ ALQ YR DE PD+
Sbjct: 4 LFRPFVGFKDIRLVHKEPRHSSDRAYVLCFVEFSDAKCAITAMEALQEYRFDERKPDAAV 63
Query: 233 LRLQFSRN 240
L ++F+RN
Sbjct: 64 LNIKFARN 71
>gi|110430655|gb|ABG73445.1| RNA recognition motif family protein [Oryza brachyantha]
Length = 237
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Query: 165 STKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMD 224
++ R+ ++IFRPF G++EVRLV KES+ G +LCFVDF P+ A +AL LQGY+ D
Sbjct: 151 TSPRDASNIFRPFSGFREVRLVNKESR-HAGRYNLLCFVDFATPSEARSALETLQGYKFD 209
Query: 225 EDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
E D S LR++ S + R + G RGR+
Sbjct: 210 EHDHQSSNLRIELSLSR-TRPIGGPRGRK 237
>gi|343887275|dbj|BAK61821.1| RRM-containing protein [Citrus unshiu]
Length = 231
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 16/139 (11%)
Query: 103 PVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLP 162
P+ DP++ G+ P + + +I D + ++ + PL S+ L+V+GLP
Sbjct: 95 PLPDPNLIGQRRDIAPGI-----NPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLP 149
Query: 163 ADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYR 222
D T+REV+ I L+ S G ++LCFV+F++P CA TA+ AL GY+
Sbjct: 150 TDCTRREVSRI-----------LLNVSSTCSGDRAMVLCFVEFDDPKCARTAMDALHGYK 198
Query: 223 MDEDDPDSKFLRLQFSRNP 241
D+ PDS L++QF+ P
Sbjct: 199 FDDKKPDSPALKIQFAHFP 217
>gi|212722122|ref|NP_001131419.1| uncharacterized protein LOC100192748 [Zea mays]
gi|194691466|gb|ACF79817.1| unknown [Zea mays]
Length = 270
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
+ S+ L+V+ LP D T+REVAH+FR F G+K++R+V KE + G +LCFV+FEN
Sbjct: 190 NESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPRRSGDKAYVLCFVEFENAKF 249
Query: 211 AATALSALQG 220
A T + ALQG
Sbjct: 250 ARTPMQALQG 259
>gi|302844823|ref|XP_002953951.1| hypothetical protein VOLCADRAFT_106208 [Volvox carteri f.
nagariensis]
gi|300260763|gb|EFJ44980.1| hypothetical protein VOLCADRAFT_106208 [Volvox carteri f.
nagariensis]
Length = 817
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LP DA+++LY+E LP D T RE+ HIFRPF G+ +RLV+KE R + FVDF +
Sbjct: 467 LPSDATNSLYLENLPTDVTHRELTHIFRPFAGFVTLRLVVKEHTNR--EKSAKAFVDFTD 524
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A A+SAL GY++D + LR ++R P
Sbjct: 525 AQAATAAMSALNGYQLDLEGQTPHVLRPVYARPP 558
>gi|328875060|gb|EGG23425.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 302
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 18/122 (14%)
Query: 135 FDAAARPGHETL-------PLPP----DASSTLYVEGLPADSTKREVAHIFRPFVGYKEV 183
FD+ PG+E + P PP D STL+V LP D T+RE++ +FR G+
Sbjct: 185 FDSPPIPGYEHMMFPTARVPPPPGQFKDPQSTLFVSNLPKDVTERELSILFRFMRGFISC 244
Query: 184 RLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKF-LRLQFSRNPG 242
RLVI+E K +CF DF + A A+ LQGYRMD +D S + SRN
Sbjct: 245 RLVIREGK------YPICFCDFRDIPSAIMAMEILQGYRMDPNDVSSSISIEFDRSRNNP 298
Query: 243 PR 244
P+
Sbjct: 299 PK 300
>gi|413953431|gb|AFW86080.1| hypothetical protein ZEAMMB73_802063, partial [Zea mays]
Length = 177
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 22/156 (14%)
Query: 20 LKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRYLQSAQYSSFT 79
L PR + +V D Y +D++ + +DT ++ ++Y+R+L++ Q SF
Sbjct: 29 LTVPRPLWPTRTGDVPGAPDTAGYYPRDEERAGYRAARDTESLNASYERFLRTGQIQSFG 88
Query: 80 SGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAA 139
G A G+ +R AV GG PV D S+ G + R+ +P
Sbjct: 89 GGHA----GEPIRPAV-GGNAAYPVDDRSMMAARG-------MDSRNIGFVGGMP----- 131
Query: 140 RPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFR 175
PLPPDAS+TLY+EG+P+D T+REV+ I R
Sbjct: 132 -----EPPLPPDASNTLYIEGVPSDCTRREVSRILR 162
>gi|330840143|ref|XP_003292080.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
gi|325077715|gb|EGC31410.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
Length = 328
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 142 GHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
GH P P TL+V LP D T+REV+ +FR G+ +RL+ KE K L +C
Sbjct: 237 GHINSPPCP----TLFVSNLPKDVTEREVSILFRFMAGFVGIRLINKEGK------LPMC 286
Query: 202 FVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPR 244
F DF + AA AL LQG+RMD D S + ++F R R
Sbjct: 287 FCDFVDSQSAAMALDFLQGFRMDPKDISSS-ISIEFDRANNKR 328
>gi|281211458|gb|EFA85620.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 355
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 133 LPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKL 192
+P+ RP ++ DA STL+V LP D T+RE++ +FR G+ VRLV +E K
Sbjct: 254 MPYFLPTRPSYDL----KDACSTLFVSNLPKDVTERELSILFRFMRGFINVRLVQREGK- 308
Query: 193 RGGDPLILCFVDFENPACAATALSALQGYRMDEDD 227
+CF DF + AA A+ L G++MD D
Sbjct: 309 -----YPICFCDFRDTLSAAGAMEMLNGFKMDTKD 338
>gi|2829909|gb|AAC00617.1| Hypothetical protein [Arabidopsis thaliana]
Length = 214
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 20/90 (22%)
Query: 1 MADGYWNRQQASLLPSGGMLKRPRSDYD----------------LPPSEVLSRHDMHNYL 44
MADGYWN+Q+ P GG +KRPRSD+D PS ++ Y
Sbjct: 1 MADGYWNQQRQQHHPPGGPMKRPRSDFDSYAPSLLEINNACRLVEAPSSTMTIGHGGGYY 60
Query: 45 SQDDDLGELQPLKDTSTIGSAYDRYLQSAQ 74
+D+DL + DT TIGSAYDRYLQS Q
Sbjct: 61 PRDEDLD----VPDTRTIGSAYDRYLQSVQ 86
>gi|222634953|gb|EEE65085.1| hypothetical protein OsJ_20124 [Oryza sativa Japonica Group]
Length = 236
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK 191
D S+ L+V+GLP D T+REVAH+FRPFVG+K++RLV KE +
Sbjct: 125 DESNILFVDGLPTDCTRREVAHLFRPFVGFKDIRLVHKEPR 165
>gi|166240105|ref|XP_646953.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|165988745|gb|EAL73083.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 356
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 14/85 (16%)
Query: 148 LPPDAS--------STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI 199
LPP +S STL+V LP D T+RE++ +FR G+ +RL+ KE K L
Sbjct: 258 LPPQSSISTTGMPCSTLFVSNLPKDVTERELSILFRFMRGFVGIRLINKEGK------LP 311
Query: 200 LCFVDFENPACAATALSALQGYRMD 224
+CF DF + + AL LQG+RMD
Sbjct: 312 MCFCDFIDTQSSMFALEFLQGFRMD 336
>gi|367008274|ref|XP_003678637.1| hypothetical protein TDEL_0A00940 [Torulaspora delbrueckii]
gi|359746294|emb|CCE89426.1| hypothetical protein TDEL_0A00940 [Torulaspora delbrueckii]
Length = 682
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 97 GGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAAR---PGHETLPLPPDAS 153
G V+R+ S + T + + P N+ SS Q AR P + PP
Sbjct: 496 GSVSRVAHS-ANGTQKGSISNPSSSTNVASSGAISQADLSLLARVLPPANPADQNPP--C 552
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+T++E+ H+F G++ + K S G P +CFV+FE+ + A
Sbjct: 553 NTLYVGNLPPDTTEQELRHLFSGQQGFRRLSFRNKNSNGNGHGP--MCFVEFEDVSFATR 610
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ +K +RL FS+NP G RG
Sbjct: 611 ALAELYGSQLPRASASNKGGIRLSFSKNP-----LGVRG 644
>gi|50288333|ref|XP_446595.1| hypothetical protein [Candida glabrata CBS 138]
gi|42557534|emb|CAE84437.1| putative Whi3 protein [Candida glabrata]
gi|49525903|emb|CAG59522.1| unnamed protein product [Candida glabrata]
Length = 671
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ +CA
Sbjct: 544 NTLYVGNLPSDATEQELRQLFSNQFGFRRLSFRNKNANGTGHGHGPMCFVEFDDVSCATR 603
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL L G ++ ++K +RL FS+NP G RG
Sbjct: 604 ALVELYGSQLPRATVNTKGGIRLSFSKNP-----LGVRG 637
>gi|217075194|gb|ACJ85957.1| unknown [Medicago truncatula]
Length = 107
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 21/114 (18%)
Query: 1 MADGYWN----RQQASLLPSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPL 56
M+D YW +Q A G KRPR++YD V H++ NY DDD G LQ +
Sbjct: 1 MSDAYWRYAEPQQHAPPTIPG---KRPRTEYD-----VSGVHNLANYFPHDDDRGRLQVI 52
Query: 57 KDTSTIGSAYDRYLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVT 110
+DT ++ ++Y+RYL++A SS SG+++ R + GGV + D VT
Sbjct: 53 RDTESLDASYERYLRNA-ISSHGSGQST--------RTIDGGVPSHSIDDSHVT 97
>gi|156837691|ref|XP_001642865.1| hypothetical protein Kpol_400p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113441|gb|EDO15007.1| hypothetical protein Kpol_400p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 600
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+T++E+ +F G++ + K S G P +CFV+FE+ + A
Sbjct: 459 NTLYVGNLPPDATEQELRQLFSSQQGFRRLSFRNKNSNGNGHGP--MCFVEFEDASFATV 516
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ +K +RL FS+NP G RG
Sbjct: 517 ALAELYGSQLPRSTVSNKGGIRLSFSKNP-----LGVRG 550
>gi|70998148|ref|XP_753803.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|66851439|gb|EAL91765.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|159126462|gb|EDP51578.1| RNA binding protein [Aspergillus fumigatus A1163]
Length = 616
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 36/211 (17%)
Query: 47 DDDLGELQPLKDTSTIGSAYDRYLQSA---------QYSSFTSGE---ASAFSGDRLRRA 94
D+D GEL LKD +G A + + SA QY + G ++ + L
Sbjct: 295 DEDTGEL--LKDP--VGYAENGHSSSATLPRRSTNPQYPTNRFGNLSLSTNMTSPPLHNY 350
Query: 95 VPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPD--- 151
PGG R+ V PS G ++ P+ + P H P+
Sbjct: 351 APGGSGRMGVPTPSSAFPQAINGNTMMG-------GHGYPYGSQHTPRHSLPAANPNDLN 403
Query: 152 -ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
+TLYV LP D+++ E+ +F GYK + K++ +CFV+F+ A
Sbjct: 404 PPCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNG-------PMCFVEFDEVAM 456
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A+ AL+ L GY++ +RL FS+NP
Sbjct: 457 ASKALNELYGYKLSNSTKTG--IRLSFSKNP 485
>gi|384499199|gb|EIE89690.1| hypothetical protein RO3G_14401 [Rhizopus delemar RA 99-880]
Length = 400
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP +TLYV LP + + E+ +F +GYK + IK S+ +G +CFV+FE+
Sbjct: 292 PP--CNTLYVGNLPLCTNQEELRSLFSKCLGYKRMSFRIK-SQQQGP----MCFVEFEDV 344
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
CA+ A+S LQG+ + +RL FS+NP
Sbjct: 345 LCASQAMSQLQGFALSNSLKGG--IRLSFSKNP 375
>gi|198423670|ref|XP_002129832.1| PREDICTED: similar to MEChanosensory abnormality family member
(mec-8) [Ciona intestinalis]
Length = 359
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLPAD+ KRE+ +FR F GY+ +I+ + G P+ + FV F++ A A
Sbjct: 83 TLFVSGLPADAKKRELYLLFRGFTGYEGS--IIRTTAKPGKAPVPVGFVTFDSRGEADLA 140
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
++LQG + D + P + LRL+F++
Sbjct: 141 KNSLQGIKFDPELPHT--LRLEFAK 163
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+S L V + +T++E+ IF F GY +L+ RGG ++ V+F + A+
Sbjct: 276 TSCLLVCNIGGGTTEKELKDIFSRFHGYVRAKLIN-----RGG--MLCAVVEFTDAGTAS 328
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSR 239
AL +LQG R++ D +R++F+R
Sbjct: 329 YALHSLQGTRLN----DRSAMRIEFAR 351
>gi|156408498|ref|XP_001641893.1| predicted protein [Nematostella vectensis]
gi|156229034|gb|EDO49830.1| predicted protein [Nematostella vectensis]
Length = 97
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D REV +FR F GY + S L+ D + FV FEN CA+ A
Sbjct: 3 TLFVSGLPLDVKPREVYLLFRSFKGY-------EGSLLKLTDKQPVAFVTFENKDCASDA 55
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
S LQG + D D S+ LRL+F+++
Sbjct: 56 KSELQGVQFDPD--VSQTLRLEFAKS 79
>gi|281205884|gb|EFA80073.1| hypothetical protein PPL_06895 [Polysphondylium pallidum PN500]
Length = 639
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 133 LPFDAAARPGHETLP--LPP-------DASSTLYVEGLPADSTKREVAHIFRPFVGYKEV 183
LP A P T+P +PP DA++TL+ LP D T+RE++ +FR G+ V
Sbjct: 525 LPHHHGAYPD-PTMPYFIPPRQNFDMKDANTTLFFSNLPKDVTERELSILFRFMRGFLNV 583
Query: 184 RLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDS 230
RLV ++ K +CF DF AA A+ L G++MD D S
Sbjct: 584 RLVQRDGKYP------ICFCDFRGVPSAAIAMEMLNGFKMDPKDTSS 624
>gi|156845900|ref|XP_001645839.1| hypothetical protein Kpol_1054p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156116508|gb|EDO17981.1| hypothetical protein Kpol_1054p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 683
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T+ E+ +F G++ + K + G P +CFV+FE+ + A
Sbjct: 562 NTLYVGNLPSDATEHELRQLFSSQPGFRRLSFRNKNTNGNGHGP--ICFVEFEDVSFATR 619
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ + +K +RL FS+NP G RG
Sbjct: 620 ALAELYGSQLPSTNVSNKGGIRLSFSKNP-----LGVRG 653
>gi|301619063|ref|XP_002938921.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 199
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F+N A A A
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVTFDNRAGAEAA 73
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 74 KNALNGIRFDPENPQT--LRLEFAK 96
>gi|259149165|emb|CAY82407.1| Whi3p [Saccharomyces cerevisiae EC1118]
gi|365763510|gb|EHN05038.1| Whi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 661
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNP----GPRSVFGARGR 252
AL+ L G ++ SK +RL FS+NP GP S G G
Sbjct: 598 ALAELYGTQLPRSTVSSKGGIRLSFSKNPLGVRGPNSRRGGSGN 641
>gi|254580201|ref|XP_002496086.1| ZYRO0C10164p [Zygosaccharomyces rouxii]
gi|238938977|emb|CAR27153.1| ZYRO0C10164p [Zygosaccharomyces rouxii]
Length = 745
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+T++E+ +F G++ + K S G P +CFV+FE+ + A
Sbjct: 617 NTLYVGNLPPDATEQELRQLFSGQQGFRRLSFRNKNSNGNGHGP--MCFVEFEDVSFATR 674
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ +K +RL FS+NP G RG
Sbjct: 675 ALAELYGSQLPRASASNKGGIRLSFSKNP-----LGVRG 708
>gi|119479645|ref|XP_001259851.1| RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408005|gb|EAW17954.1| RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 616
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 36/211 (17%)
Query: 47 DDDLGELQPLKDTSTIGSAYDRYLQSA---------QYSSFTSGE---ASAFSGDRLRRA 94
D+D GEL LKD +G A + + S QY + G ++ + L
Sbjct: 295 DEDTGEL--LKDP--VGYAENGHSSSVTLPRRSTNPQYPTNRFGSLSLSTNMTSPPLHNY 350
Query: 95 VPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPD--- 151
PGG R+ V PS G ++ P+ + P H P+
Sbjct: 351 APGGSGRMGVPTPSSAFPQAINGNTMMG-------GHGYPYGSQHTPRHSLPAANPNDLN 403
Query: 152 -ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
+TLYV LP D+++ E+ +F GYK + K++ +CFV+F+ A
Sbjct: 404 PPCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNG-------PMCFVEFDEVAM 456
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A+ AL+ L GY++ + +RL FS+NP
Sbjct: 457 ASKALNELYGYKLSNS--NKTGIRLSFSKNP 485
>gi|148222884|ref|NP_001087735.1| RNA binding protein with multiple splicing 2 [Xenopus laevis]
gi|51703926|gb|AAH81153.1| MGC84222 protein [Xenopus laevis]
Length = 197
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F+N A A A
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 73
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 74 KNALNGIRFDPENPQT--LRLEFAK 96
>gi|301619061|ref|XP_002938920.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 198
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F+N A A A
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 73
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 74 KNALNGIRFDPENPQT--LRLEFAK 96
>gi|345314045|ref|XP_001507449.2| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Ornithorhynchus anatinus]
Length = 123
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F+N A A A
Sbjct: 3 TLFVSGLPMDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVTFDNRAGAEAA 55
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 56 KNALNGIRFDPENPQT--LRLEFAK 78
>gi|148223487|ref|NP_001081864.1| RNA-binding protein with multiple splicing [Xenopus laevis]
gi|13124486|sp|Q9YGP5.1|RBPMS_XENLA RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4324639|gb|AAD16971.1| RRM-type RNA-binding protein hermes [Xenopus laevis]
gi|66912013|gb|AAH97507.1| LOC398092 protein [Xenopus laevis]
Length = 196
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F+N A A A
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 73
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 74 KNALNGIRFDPENPQT--LRLEFAK 96
>gi|256270770|gb|EEU05931.1| Whi3p [Saccharomyces cerevisiae JAY291]
Length = 661
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNP----GPRSVFGARGR 252
AL+ L G ++ SK +RL FS+NP GP S G G
Sbjct: 598 ALAELYGRQLPRSTVSSKGGIRLSFSKNPLGVRGPNSRRGGSGN 641
>gi|349580746|dbj|GAA25905.1| K7_Whi3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 661
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNP----GPRSVFGARGR 252
AL+ L G ++ SK +RL FS+NP GP S G G
Sbjct: 598 ALAELYGRQLPRSTVSSKGGIRLSFSKNPLGVRGPNSRRGGSGN 641
>gi|323303359|gb|EGA57155.1| Whi3p [Saccharomyces cerevisiae FostersB]
Length = 661
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNP----GPRSVFGARGR 252
AL+ L G ++ SK +RL FS+NP GP S G G
Sbjct: 598 ALAELYGRQLPRSTVSSKGGIRLSFSKNPLGVRGPNSRRGGSGN 641
>gi|207341833|gb|EDZ69780.1| YNL197Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 661
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNP----GPRSVFGARGR 252
AL+ L G ++ SK +RL FS+NP GP S G G
Sbjct: 598 ALAELYGRQLPRSTVSSKGGIRLSFSKNPLGVRGPNSRRGGSGN 641
>gi|6324132|ref|NP_014202.1| Whi3p [Saccharomyces cerevisiae S288c]
gi|465481|sp|P34761.1|WHI3_YEAST RecName: Full=Protein WHI3
gi|393077|gb|AAA03320.1| Whi3p [Saccharomyces cerevisiae]
gi|600068|emb|CAA55511.1| N1382 [Saccharomyces cerevisiae]
gi|1302195|emb|CAA96092.1| WHI3 [Saccharomyces cerevisiae]
gi|285814462|tpg|DAA10356.1| TPA: Whi3p [Saccharomyces cerevisiae S288c]
gi|392296797|gb|EIW07898.1| Whi3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 661
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNP----GPRSVFGARGR 252
AL+ L G ++ SK +RL FS+NP GP S G G
Sbjct: 598 ALAELYGRQLPRSTVSSKGGIRLSFSKNPLGVRGPNSRRGGSGN 641
>gi|260794824|ref|XP_002592407.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
gi|229277626|gb|EEN48418.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
Length = 1558
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D+ TL+V GLP D+ RE+ +FR + GY+ L + + G FV FE+ A
Sbjct: 13 DSVRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTTKQPVG-------FVTFESRAG 65
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSR 239
A A ALQG R D D P + LRL+F++
Sbjct: 66 AEAAKQALQGVRFDPDMPQT--LRLEFAK 92
Score = 44.3 bits (103), Expect = 0.050, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 176 PFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRL 235
PF G+ +RL +GG P+ CF++F + CA A++ALQGY + D LR+
Sbjct: 141 PFPGFSRLRL-----NNKGGSPV--CFIEFTDIPCATQAMNALQGYVLLSSDRGG--LRI 191
Query: 236 QFSRN 240
+++RN
Sbjct: 192 EYARN 196
>gi|238495454|ref|XP_002378963.1| RNA binding protein [Aspergillus flavus NRRL3357]
gi|317149634|ref|XP_001823556.2| RNA binding protein [Aspergillus oryzae RIB40]
gi|220695613|gb|EED51956.1| RNA binding protein [Aspergillus flavus NRRL3357]
gi|391872269|gb|EIT81403.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 614
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Query: 83 ASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPG 142
A+ S L PGG + + PS Q++ + S + LP+ P
Sbjct: 339 ATNLSSPPLSNYTPGGSAHMGIPPPSTA---------YPQSINNMSGNHGLPYANPHTPR 389
Query: 143 HETLPLPPD----ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
H P+ +TLYV LP D+++ E+ +F GYK + K++
Sbjct: 390 HSLPAANPNDMNPPCNTLYVGNLPPDASEEELKALFMKQRGYKRLCFRNKQNG------- 442
Query: 199 ILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+CFV+FE+ A +L+ L GY++ +RL FS+NP
Sbjct: 443 PMCFVEFEDVGTAGKSLNELYGYKLSNS--IKTGIRLSFSKNP 483
>gi|151944344|gb|EDN62622.1| whiskey [Saccharomyces cerevisiae YJM789]
Length = 661
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNP----GPRSVFGARGR 252
AL+ L G ++ SK +RL FS+NP GP S G G
Sbjct: 598 ALAELYGRQLPRSTVSSKGGIRLSFSKNPLGVRGPNSRRGGSGN 641
>gi|83772293|dbj|BAE62423.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 566
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Query: 83 ASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPG 142
A+ S L PGG + + PS Q++ + S + LP+ P
Sbjct: 291 ATNLSSPPLSNYTPGGSAHMGIPPPSTA---------YPQSINNMSGNHGLPYANPHTPR 341
Query: 143 HETLPLPPD----ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
H P+ +TLYV LP D+++ E+ +F GYK + K++
Sbjct: 342 HSLPAANPNDMNPPCNTLYVGNLPPDASEEELKALFMKQRGYKRLCFRNKQNG------- 394
Query: 199 ILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+CFV+FE+ A +L+ L GY++ +RL FS+NP
Sbjct: 395 PMCFVEFEDVGTAGKSLNELYGYKLSNS--IKTGIRLSFSKNP 435
>gi|365988166|ref|XP_003670914.1| hypothetical protein NDAI_0F03530 [Naumovozyma dairenensis CBS 421]
gi|343769685|emb|CCD25671.1| hypothetical protein NDAI_0F03530 [Naumovozyma dairenensis CBS 421]
Length = 640
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK-----LRGGDPLI---LCFVDF 205
+TLYV LP D T++E+ +F G+K + +K + L + +CFV+F
Sbjct: 485 NTLYVGNLPVDCTEQELRQLFSTQEGFKRLSFRVKNNNSNNVMLSNSNSAAHGPMCFVEF 544
Query: 206 ENPACAATALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
E+ A A AL+ L G ++ P +K +RL FS+NP G RG
Sbjct: 545 EDIAYATKALAELYGTQLPRATPSNKGGIRLSFSKNP-----LGVRG 586
>gi|366992418|ref|XP_003675974.1| hypothetical protein NCAS_0D00290 [Naumovozyma castellii CBS 4309]
gi|342301840|emb|CCC69610.1| hypothetical protein NCAS_0D00290 [Naumovozyma castellii CBS 4309]
Length = 626
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+T++E+ +F G++ + K + G P +CFV+FE+ + A
Sbjct: 516 NTLYVGNLPPDATEQELRQLFSSQEGFRRLSFRNKNTNGHGHGP--MCFVEFEDISFATR 573
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ SK +RL FS+NP G RG
Sbjct: 574 ALAELYGSQLPRPSLSSKGGIRLSFSKNP-----LGVRG 607
>gi|324509983|gb|ADY44181.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 145 TLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVD 204
T +PP TL+V GLP D+ RE+ +FR + GY+ L I + P + FV
Sbjct: 22 TSAVPPAQVRTLFVSGLPMDAKPRELYLLFRAYSGYESSLLKITSKNGKTASP--VGFVT 79
Query: 205 FENPACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
F A A A ALQG R D D+ + +RL+ +R+
Sbjct: 80 FSTKAEADEARKALQGVRFDPDNAQT--IRLELARS 113
>gi|324504525|gb|ADY41956.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 145 TLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVD 204
T +PP TL+V GLP D+ RE+ +FR + GY+ L I + P + FV
Sbjct: 22 TSAVPPAQVRTLFVSGLPMDAKPRELYLLFRAYSGYESSLLKITSKNGKTASP--VGFVT 79
Query: 205 FENPACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
F A A A ALQG R D D+ + +RL+ +R+
Sbjct: 80 FSTKAEADEARKALQGVRFDPDNAQT--IRLELARS 113
>gi|410075513|ref|XP_003955339.1| hypothetical protein KAFR_0A07700 [Kazachstania africana CBS 2517]
gi|372461921|emb|CCF56204.1| hypothetical protein KAFR_0A07700 [Kazachstania africana CBS 2517]
Length = 571
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+T++E+ +F G++ + K S G P +CFV+F++ + A
Sbjct: 442 NTLYVGNLPPDATEQELRQLFSKQQGFRRLSFKNKSSNGNGHGP--MCFVEFDDVSFATR 499
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ +K +RL FS+NP G RG
Sbjct: 500 ALAELYGSQLPRTTTSNKGGIRLSFSKNP-----LGVRG 533
>gi|121713206|ref|XP_001274214.1| RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119402367|gb|EAW12788.1| RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 616
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 91 LRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDA--AARPGHETLPL 148
L+ PG R+ V PS G +L+ N + P + AA P P
Sbjct: 347 LQTYAPGNSARVGVPTPSSAFPQTMNGNNLMGNHGYHYNNQHTPRHSLPAANPNDLNPPC 406
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
+TLYV LP D+++ E+ +F GYK + K++ +CFV+F+
Sbjct: 407 -----NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNG-------PMCFVEFDEV 454
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A A+ AL+ L GY++ +RL FS+NP
Sbjct: 455 AMASKALNELYGYKLSNS--VKTGIRLSFSKNP 485
>gi|401623965|gb|EJS42043.1| whi3p [Saccharomyces arboricola H-6]
Length = 664
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ + A
Sbjct: 541 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 600
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ SK +RL FS+NP G RG
Sbjct: 601 ALAELYGRQLPRSTVSSKGGIRLSFSKNP-----LGVRG 634
>gi|291241724|ref|XP_002740760.1| PREDICTED: conserved hypothetical protein-like, partial
[Saccoglossus kowalevskii]
Length = 297
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + + P + FV FE A A
Sbjct: 3 TLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTGKQGKNTSP--VGFVTFETRVGAEAA 60
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
ALQG R D D P + LRL+F+++
Sbjct: 61 KQALQGVRFDPDIPQT--LRLEFAKS 84
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
STL+V L +T+ E+ +F G+ +RL K GG P CFV+F+N A+
Sbjct: 197 CSTLFVANLGTHTTEEELRELFGRIPGFSRLRLHNK-----GGAPC--CFVEFQNVVFAS 249
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSRN 240
AL+ +QG M D LR++F++N
Sbjct: 250 QALNQMQGQVMFSSDRGG--LRIEFAKN 275
>gi|365758778|gb|EHN00605.1| Whi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 664
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ + A
Sbjct: 541 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 600
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ SK +RL FS+NP G RG
Sbjct: 601 ALAELYGRQLPRSTVSSKGGIRLSFSKNP-----LGVRG 634
>gi|223648622|gb|ACN11069.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 200
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F+N A A
Sbjct: 22 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRTGAEAA 74
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 75 KNALNGIRFDPESPQT--LRLEFAK 97
>gi|126277363|ref|XP_001375205.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Monodelphis domestica]
Length = 257
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 34 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVTFDSRAGAEAA 86
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 87 KNALNGIRFDPENPQT--LRLEFAK 109
>gi|45382377|ref|NP_990200.1| RNA-binding protein with multiple splicing [Gallus gallus]
gi|13124483|sp|Q9W6I1.1|RBPMS_CHICK RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4835860|gb|AAD30273.1|AF129933_1 RRM-type RNA-binding protein hermes [Gallus gallus]
Length = 200
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 23 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVTFDSRAGAEAA 75
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 76 KNALNGIRFDPENPQT--LRLEFAK 98
>gi|171683983|ref|XP_001906933.1| hypothetical protein [Podospora anserina S mat+]
gi|170941952|emb|CAP67604.1| unnamed protein product [Podospora anserina S mat+]
Length = 570
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FEN A
Sbjct: 373 NTLYVGNLPVDTSEEELKQLFSKQRGYKRLCFRTKQNG-------PMCFVEFENITFATK 425
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G+++ +RL FS+NP
Sbjct: 426 ALNELYGFQLHNSVKGG--IRLSFSKNP 451
>gi|224062243|ref|XP_002193531.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 167
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ A A A
Sbjct: 5 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 57
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 58 KNALNGIRFDPENPQT--LRLEFAK 80
>gi|366995285|ref|XP_003677406.1| hypothetical protein NCAS_0G01660 [Naumovozyma castellii CBS 4309]
gi|342303275|emb|CCC71053.1| hypothetical protein NCAS_0G01660 [Naumovozyma castellii CBS 4309]
Length = 585
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI-------------- 199
+TLYV LPAD T++E+ +F G+K + IK SKL
Sbjct: 440 NTLYVGNLPADCTEQELRLLFSNQPGFKRLSFRIKNSKLNPSSSNTNASIMPSSSAAHGP 499
Query: 200 LCFVDFENPACAATALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
+CFV+FE+ + A AL+ L G ++ +K +RL FS+NP G RG
Sbjct: 500 MCFVEFEDISYATMALAELYGAQLPRATTSTKGGIRLSFSKNP-----LGVRG 547
>gi|449273343|gb|EMC82847.1| RNA-binding protein with multiple splicing, partial [Columba livia]
Length = 180
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ A A A
Sbjct: 3 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 55
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 56 KNALNGIRFDPENPQT--LRLEFAK 78
>gi|403216283|emb|CCK70780.1| hypothetical protein KNAG_0F01120 [Kazachstania naganishii CBS
8797]
Length = 635
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 96 PGGVTRLPVSDPSV-TGRHGATGPDLV-QNLRSSSIDDQLPFDAAAR---PGHETLPLPP 150
P V+ P+ S+ +G AT P + N+ SS Q A+ P + PP
Sbjct: 436 PNNVSHGPIDLTSMGSGMKPATNPSVAPANVAGSSTMSQADLSLLAKVPPPANPADQNPP 495
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
+TLYV LP D+T++E+ H+F G++ RL + G +CFV+F++ +
Sbjct: 496 --CNTLYVGNLPPDATEQELRHLFSAQQGFR--RLSFRNKNGNGNGHGPMCFVEFDDVSF 551
Query: 211 AATALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
A AL+ L G ++ +K +RL FS+NP G RG
Sbjct: 552 ATRALAELYGSKLPRSTISNKGGIRLSFSKNP-----LGVRG 588
>gi|50288343|ref|XP_446600.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525908|emb|CAG59527.1| unnamed protein product [Candida glabrata]
Length = 674
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK--LRGGDPLILCFVDFENPACA 211
+TLYV LP D++++E+ +F P G++ + K + G P +CFV+FE+ + A
Sbjct: 558 NTLYVGNLPPDTSEQELRQLFSPQPGFRRLSFKNKNNNGHTHGHGP--MCFVEFEDVSFA 615
Query: 212 ATALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ +SK +RL FS+NP G RG
Sbjct: 616 TRALAELYGRQLPRTGANSKGGIRLSFSKNP-----LGVRG 651
>gi|406606818|emb|CCH41854.1| RNA-binding protein [Wickerhamomyces ciferrii]
Length = 558
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 24/148 (16%)
Query: 118 PDLVQNLRSSSIDDQL--PFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFR 175
P L + +SS +D L A P + P +TLYV LP D+T+ E+ +F
Sbjct: 405 PTLTNSQQSSQVDLSLLARVPPPANPADQNPPC-----NTLYVGNLPPDATEAELRQLFS 459
Query: 176 PFVGYKEVRLVIKESKLRGGDPLI----------LCFVDFENPACAATALSALQGYRMDE 225
P G++ + K L G L +CFV+FE+ A A AL+ L G +
Sbjct: 460 PQRGFRRLSFRTKTQPLNGNGQLNSAGSSHSHGPMCFVEFEDVAYATRALAELYGRTLPR 519
Query: 226 DD--PDSKFLRLQFSRNPGPRSVFGARG 251
P +RL FS+NP G RG
Sbjct: 520 PGGVPGKGGIRLSFSKNP-----LGVRG 542
>gi|326926326|ref|XP_003209353.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 204
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ A A A
Sbjct: 27 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 79
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 80 KNALNGIRFDPENPQT--LRLEFAK 102
>gi|354504963|ref|XP_003514542.1| PREDICTED: RNA-binding protein with multiple splicing 2-like,
partial [Cricetulus griseus]
Length = 181
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 3 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 55
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D D+P + LRL+F++
Sbjct: 56 KNALNGIRFDPDNPQT--LRLEFAK 78
>gi|395502670|ref|XP_003755700.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Sarcophilus harrisii]
Length = 207
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 21/109 (19%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ A A A
Sbjct: 30 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 82
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR------------NPGPRSVFGARG 251
+AL G R D ++P + LRL+F++ P P S+ A G
Sbjct: 83 KNALNGIRFDPENPQT--LRLEFAKANTKMAKSKLMATPNPTSIHPALG 129
>gi|301756893|ref|XP_002914317.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Ailuropoda melanoleuca]
Length = 296
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 139 ARPGHETLPLPP------DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKL 192
ARP TL P TL+V GLP D RE+ +FRPF GY+ + + +
Sbjct: 96 ARPSFSTLAWPATFFRGASPVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP 155
Query: 193 RGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
G FV F++ A A A +AL G R D ++P + LRL+F++
Sbjct: 156 VG-------FVIFDSRAGAEAAKNALNGIRFDPENPQT--LRLEFAK 193
>gi|255949550|ref|XP_002565542.1| Pc22g16260 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592559|emb|CAP98914.1| Pc22g16260 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 602
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 133 LPFDAAARPGHETLPLPPD----ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIK 188
P++A P H P+ +TLYV LP D+++ E+ +F GYK + K
Sbjct: 366 FPYNAQHTPRHSLPAANPNDLNPPCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNK 425
Query: 189 ESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
++ +CFV+F+ A A+ AL+ L GY++ +RL FS+NP
Sbjct: 426 QNG-------PMCFVEFDEVAMASKALNELYGYKLSNS--VKTGIRLSFSKNP 469
>gi|425774296|gb|EKV12605.1| RNA binding protein [Penicillium digitatum Pd1]
gi|425776297|gb|EKV14519.1| RNA binding protein [Penicillium digitatum PHI26]
Length = 518
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 133 LPFDAAARPGHETLPLPPD----ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIK 188
P++A P H P+ +TLYV LP D+++ E+ +F GYK + K
Sbjct: 283 FPYNAQHTPRHSLPAANPNDLNPPCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNK 342
Query: 189 ESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
++ +CFV+F+ A A+ AL+ L GY++ +RL FS+NP
Sbjct: 343 QNG-------PMCFVEFDEVAMASKALNELYGYKLSNS--VKTGIRLSFSKNP 386
>gi|358385005|gb|EHK22602.1| hypothetical protein TRIVIDRAFT_22864, partial [Trichoderma virens
Gv29-8]
Length = 437
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F P GYK + K++ +CFV+FE+ A
Sbjct: 297 NTLYVGNLPIDTSEEELKALFSPVRGYKRLCFRTKQNG-------PMCFVEFEDIGHATK 349
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
ALS L G+ + +RL FS+NP
Sbjct: 350 ALSQLYGWCLHNSVKGG--IRLSFSKNP 375
>gi|397515721|ref|XP_003828094.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
paniscus]
Length = 230
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 9/88 (10%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
A TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A
Sbjct: 50 AVRTLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTARQP--VGFVIFDSRAGA 102
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSR 239
A +AL G R D ++P + LRL+F++
Sbjct: 103 EAAKNALNGIRFDPENPQT--LRLEFAK 128
>gi|255711664|ref|XP_002552115.1| KLTH0B07546p [Lachancea thermotolerans]
gi|238933493|emb|CAR21677.1| KLTH0B07546p [Lachancea thermotolerans CBS 6340]
Length = 639
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+T+ E+ +F G++ + K + G P +CFV+FE+ A A
Sbjct: 521 NTLYVGNLPPDATEHELRQLFSTQKGFRRLSFRNKNTNGNGHGP--MCFVEFEDVAHATR 578
Query: 214 ALSALQGY---RMDEDDPDSKFLRLQFSRNPGPRSVFGARG 251
AL+ L G R + +RL FS+NP G RG
Sbjct: 579 ALAELYGRQLPRSGTSHNNKGGIRLSFSKNP-----LGVRG 614
>gi|212534592|ref|XP_002147452.1| RNA binding protein [Talaromyces marneffei ATCC 18224]
gi|210069851|gb|EEA23941.1| RNA binding protein [Talaromyces marneffei ATCC 18224]
Length = 591
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LPAD+ + E+ +F GYK + K++ +CFV+F+ A A+
Sbjct: 385 NTLYVGNLPADTQEEELKALFSKQRGYKRLCFRNKQNG-------PMCFVEFDEVAMASK 437
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L GY++ +RL FS+NP
Sbjct: 438 ALNELYGYKLSNS--VKTGIRLSFSKNP 463
>gi|213513247|ref|NP_001133590.1| RNA-binding protein with multiple splicing [Salmo salar]
gi|209154600|gb|ACI33532.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 201
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F+N A A
Sbjct: 23 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRTGAEAA 75
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 76 KNALNGIRFDPECPQT--LRLEFAK 98
>gi|410912397|ref|XP_003969676.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 259
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ + A A
Sbjct: 91 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVTFDSRSGAEAA 143
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 144 KNALNGIRFDPENPQT--LRLEFAK 166
>gi|242790607|ref|XP_002481586.1| RNA binding protein [Talaromyces stipitatus ATCC 10500]
gi|218718174|gb|EED17594.1| RNA binding protein [Talaromyces stipitatus ATCC 10500]
Length = 546
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LPAD+ + E+ +F GYK + K++ +CFV+F+ A A+
Sbjct: 340 NTLYVGNLPADTQEEELKALFSKQRGYKRLCFRNKQNG-------PMCFVEFDEVAMASK 392
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L GY++ +RL FS+NP
Sbjct: 393 ALNELYGYKLSNS--VKTGIRLSFSKNP 418
>gi|402874657|ref|XP_003901146.1| PREDICTED: uncharacterized protein LOC101014530 [Papio anubis]
Length = 427
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 250 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTARQP--VGFVIFDSRAGAEAA 302
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 303 KNALNGIRFDPENPQT--LRLEFAK 325
>gi|41053746|ref|NP_956553.1| RNA binding protein with multiple splicing 2b [Danio rerio]
gi|29124508|gb|AAH48876.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|42542540|gb|AAH66414.1| Rbpms2 protein [Danio rerio]
gi|45126693|dbj|BAD12195.1| RNA binding protein [Danio rerio]
Length = 200
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 21 TLFVSGLPTDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 73
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 74 KNALNGVRFDPENPQT--LRLEFAK 96
>gi|313232434|emb|CBY24102.1| unnamed protein product [Oikopleura dioica]
Length = 300
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL+V GLP+D +RE+ +FRP+ G++ L + + + FV F++ A
Sbjct: 60 DEVRTLFVSGLPSDVKQRELRLLFRPYKGFESAVLKFPQKPGKVYPIAPVAFVTFKSKAE 119
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSR 239
A LQG + D D+P + LRL+F++
Sbjct: 120 AQVPKEELQGEKFDNDNPTT--LRLEFAK 146
>gi|291402858|ref|XP_002718127.1| PREDICTED: RNA binding protein with multiple splicing 2
[Oryctolagus cuniculus]
Length = 210
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 21/109 (19%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 84
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR------------NPGPRSVFGARG 251
+AL G R D ++P + LRL+F++ P P SV A G
Sbjct: 85 KNALNGIRFDPENPQT--LRLEFAKANTKMAKSKLMATPNPSSVHPALG 131
>gi|403300512|ref|XP_003940978.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Saimiri
boliviensis boliviensis]
Length = 238
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 61 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTARQP--VGFVIFDSRAGAEAA 113
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 114 KNALNGIRFDPENPQT--LRLEFAK 136
>gi|31980694|ref|NP_082306.2| RNA-binding protein with multiple splicing 2 [Mus musculus]
gi|81915124|sp|Q8VC52.1|RBPS2_MOUSE RecName: Full=RNA-binding protein with multiple splicing 2
gi|18255713|gb|AAH21788.1| RNA binding protein with multiple splicing 2 [Mus musculus]
gi|74140118|dbj|BAE33785.1| unnamed protein product [Mus musculus]
gi|74194800|dbj|BAE25995.1| unnamed protein product [Mus musculus]
gi|148694156|gb|EDL26103.1| RNA binding protein with multiple splicing 2 [Mus musculus]
Length = 206
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 21/109 (19%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 26 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 78
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR------------NPGPRSVFGARG 251
+AL G R D ++P + LRL+F++ P P SV A G
Sbjct: 79 KNALNGIRFDPENPQT--LRLEFAKANTKMAKSKLIATPNPTSVHPALG 125
>gi|350578519|ref|XP_003121510.3| PREDICTED: RNA-binding protein with multiple splicing 2-like [Sus
scrofa]
Length = 327
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 149 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 201
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 202 KNALNGIRFDPENPQT--LRLEFAK 224
>gi|290651751|ref|NP_001166897.1| RNA binding protein with multiple splicing 2 [Rattus norvegicus]
gi|197246487|gb|AAI69038.1| Rbpms2 protein [Rattus norvegicus]
Length = 210
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 21/109 (19%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 84
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR------------NPGPRSVFGARG 251
+AL G R D ++P + LRL+F++ P P SV A G
Sbjct: 85 KNALNGIRFDPENPQT--LRLEFAKANTKMAKSKLIATPNPTSVHPALG 131
>gi|355692793|gb|EHH27396.1| RNA-binding protein with multiple splicing 2, partial [Macaca
mulatta]
Length = 181
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTARQP--VGFVIFDSRAGAEAA 56
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 57 KNALNGIRFDPENPQT--LRLEFAK 79
>gi|355778103|gb|EHH63139.1| RNA-binding protein with multiple splicing 2, partial [Macaca
fascicularis]
Length = 181
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTARQP--VGFVIFDSRAGAEAA 56
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 57 KNALNGIRFDPENPQT--LRLEFAK 79
>gi|327285368|ref|XP_003227406.1| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Anolis carolinensis]
Length = 194
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ + A A
Sbjct: 3 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVTFDSRSGAEAA 55
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 56 KNALNGIRFDPENPQT--LRLEFAK 78
>gi|326428976|gb|EGD74546.1| hypothetical protein PTSG_05910 [Salpingoeca sp. ATCC 50818]
Length = 215
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 122 QNLRSSSIDDQLPFDAAARP--GHETLPLPPDASST--LYVEGLPADSTKREVAHIFRPF 177
Q ++S D++ P AAR G + DA + LYV LP +TK +V ++F F
Sbjct: 105 QRKKTSGRDEEEPATKAARTETGRRAMDESGDAGTNKILYVSHLPPTATKSDVHNLFAKF 164
Query: 178 VGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDD 227
G EVR+V G P +CFV++E +A A+ L G+ M ED+
Sbjct: 165 EGLVEVRMV-------DGRP-DMCFVEYETARASAVAMQNLDGFSMGEDN 206
>gi|351695575|gb|EHA98493.1| RNA-binding protein with multiple splicing 2, partial
[Heterocephalus glaber]
Length = 180
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 56
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 57 KNALNGIRFDPENPQT--LRLEFAK 79
>gi|281347320|gb|EFB22904.1| hypothetical protein PANDA_002166 [Ailuropoda melanoleuca]
Length = 163
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 56
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 57 KNALNGIRFDPENPQT--LRLEFAK 79
>gi|114657607|ref|XP_001174270.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
troglodytes]
Length = 209
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTARQP--VGFVIFDSRAGAEAA 84
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 85 KNALNGIRFDPENPQT--LRLEFAK 107
>gi|34915990|ref|NP_919248.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|74762401|sp|Q6ZRY4.1|RBPS2_HUMAN RecName: Full=RNA-binding protein with multiple splicing 2
gi|34485858|gb|AAQ73311.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|34534977|dbj|BAC87172.1| unnamed protein product [Homo sapiens]
gi|119598099|gb|EAW77693.1| RNA binding protein with multiple splicing 2 [Homo sapiens]
gi|225000786|gb|AAI72373.1| RNA binding protein with multiple splicing 2 [synthetic construct]
gi|261861060|dbj|BAI47052.1| RNA binding protein with multiple splicing 2 [synthetic construct]
Length = 209
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTARQP--VGFVIFDSRAGAEAA 84
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 85 KNALNGIRFDPENPQT--LRLEFAK 107
>gi|332235691|ref|XP_003267039.1| PREDICTED: RNA-binding protein with multiple splicing 2, partial
[Nomascus leucogenys]
Length = 214
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 37 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTARQP--VGFVIFDSRAGAEAA 89
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 90 KNALNGIRFDPENPQT--LRLEFAK 112
>gi|387540910|gb|AFJ71082.1| RNA-binding protein with multiple splicing 2 [Macaca mulatta]
Length = 209
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTARQP--VGFVIFDSRAGAEAA 84
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 85 KNALNGIRFDPENPQT--LRLEFAK 107
>gi|348588625|ref|XP_003480065.1| PREDICTED: RNA-binding protein with multiple splicing 2-like [Cavia
porcellus]
Length = 295
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY+ + + + G FV F++ A A A
Sbjct: 120 TLFVSGLPMDIKPRELYLLFRPFKGYEGSLIKLTSRQPVG-------FVIFDSRAGAEVA 172
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 173 KNALNGIRFDPENPQT--LRLEFAK 195
>gi|345795064|ref|XP_853385.2| PREDICTED: RNA-binding protein with multiple splicing 2 [Canis
lupus familiaris]
Length = 214
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 36 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 88
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 89 KNALNGIRFDPENPQT--LRLEFAK 111
>gi|194670736|ref|XP_596374.4| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|297479609|ref|XP_002690918.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|296483268|tpg|DAA25383.1| TPA: RNA binding protein with multiple splicing 2-like [Bos taurus]
Length = 188
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 11 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 63
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 64 KNALNGIRFDPENPQT--LRLEFAK 86
>gi|440907032|gb|ELR57225.1| RNA-binding protein with multiple splicing 2, partial [Bos
grunniens mutus]
Length = 184
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 7 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 59
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 60 KNALNGIRFDPENPQT--LRLEFAK 82
>gi|284795211|ref|NP_001165323.1| RNA binding protein with multiple splicing [Xenopus (Silurana)
tropicalis]
Length = 195
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 142 GHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
+ + LP + TL+V GLP D RE+ +FRPF GY E L+ KL P +
Sbjct: 11 SQDEISLPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VG 63
Query: 202 FVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
FV F++ + A A +AL G R D + P + LRL+F++
Sbjct: 64 FVSFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 99
>gi|12845642|dbj|BAB26834.1| unnamed protein product [Mus musculus]
Length = 168
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 21/109 (19%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 26 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 78
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR------------NPGPRSVFGARG 251
+AL G R D ++P + LRL+F++ P P SV A G
Sbjct: 79 KNALNGIRFDPENPQT--LRLEFAKANTKMAKSKLIATPNPTSVHPALG 125
>gi|426379407|ref|XP_004056389.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Gorilla
gorilla gorilla]
Length = 214
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 37 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTARQP--VGFVIFDSRAGAEAA 89
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 90 KNALNGIRFDPENPQT--LRLEFAK 112
>gi|390468449|ref|XP_002753282.2| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Callithrix jacchus]
Length = 255
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 78 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTARQP--VGFVIFDSRAGAEAA 130
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 131 KNALNGIRFDPENPQT--LRLEFAK 153
>gi|395822321|ref|XP_003784468.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Otolemur
garnettii]
Length = 211
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 34 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTARQP--VGFVIFDSRAGAEAA 86
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 87 KNALNGIRFDPENPQT--LRLEFAK 109
>gi|344293499|ref|XP_003418460.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Loxodonta africana]
Length = 183
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 7 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 59
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 60 KNALNGIRFDPENPQT--LRLEFAK 82
>gi|338717427|ref|XP_001496966.3| PREDICTED: RNA-binding protein with multiple splicing 2 [Equus
caballus]
Length = 287
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 109 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 161
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 162 KNALNGIRFDPENPQT--LRLEFAK 184
>gi|426234121|ref|XP_004011049.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Ovis
aries]
Length = 270
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY+ + + + G FV F++ A A A
Sbjct: 93 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVG-------FVIFDSRAGAEAA 145
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 146 KNALNGIRFDPENPQT--LRLEFAK 168
>gi|328774045|gb|EGF84082.1| hypothetical protein BATDEDRAFT_84797 [Batrachochytrium
dendrobatidis JAM81]
Length = 262
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP+ S L+++ LP D T ++ +F F G+KEVRLV S + FV++ N
Sbjct: 183 LPPN--SILFIQNLPTDITNASLSALFNQFPGFKEVRLVPGRSD--------IAFVEYHN 232
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
+A A AL GYR+ P+ + +++ F++
Sbjct: 233 EMHSAIAKQALHGYRL---LPEQEEIKVTFAK 261
>gi|50539886|ref|NP_001002409.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|166158150|ref|NP_001107477.1| uncharacterized protein LOC100135328 [Xenopus (Silurana)
tropicalis]
gi|49902931|gb|AAH76171.1| Zgc:92689 [Danio rerio]
gi|156230446|gb|AAI52179.1| Zgc:92689 [Danio rerio]
gi|163915769|gb|AAI57627.1| LOC100135328 protein [Xenopus (Silurana) tropicalis]
Length = 199
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ + A A
Sbjct: 21 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVTFDSRSGAEAA 73
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 74 KNALNGIRFDPESPQT--LRLEFAK 96
>gi|255083026|ref|XP_002504499.1| predicted protein [Micromonas sp. RCC299]
gi|226519767|gb|ACO65757.1| predicted protein [Micromonas sp. RCC299]
Length = 224
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 10/76 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L+V+GLP +T ++ +F+ F G+KEVR+V E+K P I FV+FE
Sbjct: 147 PPN--EILFVQGLPGATTAAMLSMLFQQFPGFKEVRMV--EAK-----PGI-AFVEFETD 196
Query: 209 ACAATALSALQGYRMD 224
A A+ ALS LQG++++
Sbjct: 197 AQASVALSGLQGFKIN 212
>gi|449681275|ref|XP_002157969.2| PREDICTED: uncharacterized protein LOC100208163 [Hydra
magnipapillata]
Length = 328
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + + P + FV FEN A
Sbjct: 28 TLFVSGLPMDTKPREIYLMFRSYSGYQGSLLKLTGKEGKKATP--VAFVTFENREQAEVC 85
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+ LQG R D + P S +R++F++
Sbjct: 86 KAELQGIRFDPELPTS--IRIEFAK 108
>gi|390337886|ref|XP_794412.3| PREDICTED: protein couch potato-like [Strongylocentrotus
purpuratus]
Length = 124
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV FE+ A A A
Sbjct: 14 TLFVSGLPMDAKPRELYLLFRAYQGYEGSLLKVTSKPGKNQSP--VGFVTFESRAGAEAA 71
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
ALQG R D + P + +RL+F+++
Sbjct: 72 KQALQGVRFDPELPQT--IRLEFAKS 95
>gi|195157804|ref|XP_002019784.1| GL12579 [Drosophila persimilis]
gi|194116375|gb|EDW38418.1| GL12579 [Drosophila persimilis]
Length = 632
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 469 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 526
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 527 KQDLQGVRFDPDMPQT--IRLEFAKS 550
>gi|444730929|gb|ELW71298.1| RNA-binding protein with multiple splicing 2 [Tupaia chinensis]
Length = 240
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 27 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 79
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 80 KNALNGIRFDPENPQT--LRLEFAK 102
>gi|346326538|gb|EGX96134.1| RNA binding protein [Cordyceps militaris CM01]
Length = 444
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 29/130 (22%)
Query: 132 QLPFDAAARPGHETL------------PLPPDAS--------STLYVEGLPADSTKREVA 171
QLP + A PG+ P PP A+ +TLYV LP+D+++ E+
Sbjct: 234 QLPINGGAGPGNSVTHMNFNHPPGSHHPRPPPANPADQNPPCNTLYVGNLPSDTSEEELK 293
Query: 172 HIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSK 231
+F GYK + K + +CFV+FE+ + A AL L G+ +
Sbjct: 294 AMFSKQRGYKRLCFRTKSNG-------PMCFVEFEDVSFATKALHELYGHPLHNSTKGG- 345
Query: 232 FLRLQFSRNP 241
+RL FS+NP
Sbjct: 346 -IRLSFSKNP 354
>gi|224049139|ref|XP_002196184.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 195
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LP + TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++
Sbjct: 17 LPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDS 69
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
+ A A +AL G R D + P + LRL+F++
Sbjct: 70 RSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 99
>gi|348526652|ref|XP_003450833.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 199
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 21 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 73
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 74 KNALNGIRFDPESPQT--LRLEFAK 96
>gi|327279916|ref|XP_003224701.1| PREDICTED: RNA-binding protein with multiple splicing-like [Anolis
carolinensis]
Length = 255
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 15/102 (14%)
Query: 144 ETLPLPPDAS------STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
E P PP+ S TL+V GLP D RE+ +FRPF GY E L+ SK G
Sbjct: 66 EQEPTPPEPSLTEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG-- 122
Query: 198 LILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
FV F++ + A A +AL G R D + P + LRL+F++
Sbjct: 123 ----FVSFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 158
>gi|313221526|emb|CBY32273.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL+V GLP+D +RE+ +FRP+ G++ L + + + FV F++ A
Sbjct: 77 DEVRTLFVSGLPSDVKQRELRLLFRPYKGFESAVLKFPQKPGKVYPIAPVAFVTFKSKAE 136
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSR 239
A LQG + D D+P + LRL+F++
Sbjct: 137 AQVPKEELQGEKFDNDNPTT--LRLEFAK 163
>gi|147903173|ref|NP_001083477.1| RNA binding protein with multiple splicing [Xenopus laevis]
gi|38014401|gb|AAH60391.1| MGC68512 protein [Xenopus laevis]
Length = 200
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LP + TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++
Sbjct: 17 LPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDS 69
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
+ A A +AL G R D + P + LRL+F++
Sbjct: 70 RSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 99
>gi|320580822|gb|EFW95044.1| hypothetical protein HPODL_3416 [Ogataea parapolymorpha DL-1]
Length = 602
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL--ILCFVDFENPACA 211
+TLYV LP D+T+ E+ +F+P G++ + K++ G +CFV+FE+ A A
Sbjct: 449 NTLYVGNLPPDATELELRTLFQPQKGFRRLSFRTKQNTGNGSSSHHGPMCFVEFEDVAYA 508
Query: 212 ATALSALQGY---RMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G R + ++K +RL FS+NP G RG
Sbjct: 509 TRALAELYGRTLPRANGSTSNNKGGIRLSFSKNP-----LGVRG 547
>gi|1345457|emb|CAA78696.1| Cpo 61.1 [Drosophila melanogaster]
Length = 615
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 452 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 509
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 510 KQDLQGVRFDPDMPQT--IRLEFAKS 533
>gi|442619713|ref|NP_001262688.1| couch potato, isoform O [Drosophila melanogaster]
gi|440217571|gb|AGB96068.1| couch potato, isoform O [Drosophila melanogaster]
Length = 748
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 500
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 501 KQDLQGVRFDPDMPQT--IRLEFAKS 524
>gi|442619711|ref|NP_732284.5| couch potato, isoform N [Drosophila melanogaster]
gi|442619725|ref|NP_732283.5| couch potato, isoform U [Drosophila melanogaster]
gi|442619729|ref|NP_001262691.1| couch potato, isoform W [Drosophila melanogaster]
gi|442619731|ref|NP_001262692.1| couch potato, isoform X [Drosophila melanogaster]
gi|442619733|ref|NP_524844.6| couch potato, isoform Y [Drosophila melanogaster]
gi|440217570|gb|AAF55484.6| couch potato, isoform N [Drosophila melanogaster]
gi|440217577|gb|AAF55485.6| couch potato, isoform U [Drosophila melanogaster]
gi|440217579|gb|AGB96071.1| couch potato, isoform W [Drosophila melanogaster]
gi|440217580|gb|AGB96072.1| couch potato, isoform X [Drosophila melanogaster]
gi|440217581|gb|AAN13754.5| couch potato, isoform Y [Drosophila melanogaster]
Length = 606
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 500
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 501 KQDLQGVRFDPDMPQT--IRLEFAKS 524
>gi|48429205|sp|Q01617.3|CPO_DROME RecName: Full=Protein couch potato
Length = 738
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 452 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 509
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 510 KQDLQGVRFDPDMPQT--IRLEFAKS 533
>gi|195348983|ref|XP_002041026.1| GM15269 [Drosophila sechellia]
gi|194122631|gb|EDW44674.1| GM15269 [Drosophila sechellia]
Length = 617
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 454 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 511
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 512 KQDLQGVRFDPDMPQT--IRLEFAKS 535
>gi|442619717|ref|NP_001262690.1| couch potato, isoform Q [Drosophila melanogaster]
gi|440217573|gb|AGB96070.1| couch potato, isoform Q [Drosophila melanogaster]
Length = 762
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 500
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 501 KQDLQGVRFDPDMPQT--IRLEFAKS 524
>gi|442619715|ref|NP_001262689.1| couch potato, isoform P [Drosophila melanogaster]
gi|440217572|gb|AGB96069.1| couch potato, isoform P [Drosophila melanogaster]
Length = 841
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 500
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 501 KQDLQGVRFDPDMPQT--IRLEFAKS 524
>gi|432851215|ref|XP_004066912.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 264
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 86 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 138
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 139 KNALNGIRFDPESPQT--LRLEFAK 161
>gi|50311967|ref|XP_456015.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645151|emb|CAG98723.1| KLLA0F20834p [Kluyveromyces lactis]
Length = 616
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+T++E+ +F G+K + K + G P +CFV+FE+ A A
Sbjct: 449 NTLYVGNLPPDATEQELRQLFGGQKGFKRLSFRNKNNNNSGHGP--MCFVEFEDVAHATR 506
Query: 214 ALSALQGYRMDE---DDPDSKFLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ +RL FS+NP G RG
Sbjct: 507 ALAELYGSQLPRPVGAHNTKGGIRLSFSKNP-----LGVRG 542
>gi|431895918|gb|ELK05336.1| Ornithine decarboxylase antizyme 2, partial [Pteropus alecto]
Length = 320
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 5 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 57
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 58 KNALNGIRFDPENPQT--LRLEFAK 80
>gi|195055450|ref|XP_001994632.1| GH15012 [Drosophila grimshawi]
gi|193892395|gb|EDV91261.1| GH15012 [Drosophila grimshawi]
Length = 193
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 30 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 87
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 88 KQDLQGVRFDPDMPQT--IRLEFAKS 111
>gi|442619721|ref|NP_001014632.3| couch potato, isoform S [Drosophila melanogaster]
gi|440217575|gb|AAX52960.3| couch potato, isoform S [Drosophila melanogaster]
Length = 962
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 500
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 501 KQDLQGVRFDPDMPQT--IRLEFAKS 524
>gi|410961120|ref|XP_003987133.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Felis
catus]
Length = 204
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 26 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 78
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 79 KNALNGIRFDPENPQT--LRLEFAK 101
>gi|321469536|gb|EFX80516.1| hypothetical protein DAPPUDRAFT_23478 [Daphnia pulex]
Length = 270
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ +L + + P + FV F A A A
Sbjct: 4 TLFVSGLPMDAKPRELYLLFRAYDGYENSQLKVTSKNGKTTSP--VGFVTFATRASAEGA 61
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 62 KQDLQGVRFDPDIPQT--IRLEFAKS 85
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
STL+V L +++E+ +F F GY +R+ K GG P+ FV++ + CAA
Sbjct: 186 STLFVANLGQFVSEQELKELFGSFPGYCRLRMHNK-----GGAPV--AFVEYADVRCAAQ 238
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRN 240
AL +LQG + D +R++++RN
Sbjct: 239 ALISLQGTYLLSSDRGG--VRIEYARN 263
>gi|195497499|ref|XP_002096126.1| GE25503 [Drosophila yakuba]
gi|194182227|gb|EDW95838.1| GE25503 [Drosophila yakuba]
Length = 1140
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 461 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 518
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 519 KQDLQGVRFDPDMPQT--IRLEFAKS 542
>gi|452000412|gb|EMD92873.1| hypothetical protein COCHEDRAFT_1223605 [Cochliobolus
heterostrophus C5]
Length = 561
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 377 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 429
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L GY + +RL FS+NP
Sbjct: 430 ALNELYGYMLHNSVKGG--IRLSFSKNP 455
>gi|330917653|ref|XP_003297901.1| hypothetical protein PTT_08457 [Pyrenophora teres f. teres 0-1]
gi|311329202|gb|EFQ94032.1| hypothetical protein PTT_08457 [Pyrenophora teres f. teres 0-1]
Length = 559
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 375 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 427
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L GY + +RL FS+NP
Sbjct: 428 ALNELYGYMLHNSVKGG--IRLSFSKNP 453
>gi|189188620|ref|XP_001930649.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972255|gb|EDU39754.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 561
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 377 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 429
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L GY + +RL FS+NP
Sbjct: 430 ALNELYGYMLHNSVKGG--IRLSFSKNP 455
>gi|169613152|ref|XP_001799993.1| hypothetical protein SNOG_09707 [Phaeosphaeria nodorum SN15]
gi|111061852|gb|EAT82972.1| hypothetical protein SNOG_09707 [Phaeosphaeria nodorum SN15]
Length = 572
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 389 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 441
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L GY + +RL FS+NP
Sbjct: 442 ALNELYGYMLHNSVKGG--IRLSFSKNP 467
>gi|432092246|gb|ELK24870.1| RNA-binding protein with multiple splicing 2 [Myotis davidii]
Length = 315
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A
Sbjct: 27 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAA 79
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D ++P + LRL+F++
Sbjct: 80 KNALNGIRFDPENPQT--LRLEFAK 102
>gi|91086239|ref|XP_972538.1| PREDICTED: similar to Squamous cell carcinoma antigen recognized by
T-cells 3 (SART-3) (mSART-3) (Tumor-rejection antigen
SART3) [Tribolium castaneum]
Length = 758
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++ L+V+GLP D ++ E+ IFRPF G K VRLV + R G P L +V+FE+ A A
Sbjct: 627 TNKLFVKGLPYDKSQEEIEAIFRPF-GAKTVRLVCR----RDGKPKGLAYVEFEDDASAK 681
Query: 213 TALSALQG 220
A+ G
Sbjct: 682 KAMEKTDG 689
>gi|194743840|ref|XP_001954408.1| GF16747 [Drosophila ananassae]
gi|190627445|gb|EDV42969.1| GF16747 [Drosophila ananassae]
Length = 141
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 30 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 87
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 88 KQDLQGVRFDPDMPQT--IRLEFAKS 111
>gi|256066562|ref|XP_002570569.1| hypothetical protein [Schistosoma mansoni]
gi|360043573|emb|CCD78986.1| hypothetical protein Smp_181270.2 [Schistosoma mansoni]
Length = 529
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR F GY + +K + G + FV FE+ A A
Sbjct: 92 TLFVSGLPLDAKPRELYLLFRSFKGY--LSSTLKPAGKNGKLTAPVGFVTFESREQAEEA 149
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+S LQG + D D ++ +RL+F+R
Sbjct: 150 MSKLQGVKFDPD--GNQHMRLEFAR 172
>gi|408388147|gb|EKJ67837.1| hypothetical protein FPSE_11985 [Fusarium pseudograminearum CS3096]
Length = 571
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
AA P + P +TLYV LP D+++ E+ +F GYK + K++
Sbjct: 377 AANPADQNPPC-----NTLYVGNLPGDASEEELKTLFSNARGYKRLCFRTKQNG------ 425
Query: 198 LILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+CFV+F++ +CA ALS G + +RL FS+NP
Sbjct: 426 -PMCFVEFDDVSCATKALSDFYGTPLHNSTKGG--IRLSFSKNP 466
>gi|444315532|ref|XP_004178423.1| hypothetical protein TBLA_0B00600 [Tetrapisispora blattae CBS 6284]
gi|387511463|emb|CCH58904.1| hypothetical protein TBLA_0B00600 [Tetrapisispora blattae CBS 6284]
Length = 734
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+T++E+ +F G++ RL + G +CFV+FE+ + A
Sbjct: 608 NTLYVGNLPPDATEQELRQLFSTQDGFR--RLSFRNKNNNGNGHGPMCFVEFEDVSYATR 665
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ +K +RL FS+NP G RG
Sbjct: 666 ALAELYGSQLQRTTATNKGGIRLSFSKNP-----LGVRG 699
>gi|270009865|gb|EFA06313.1| hypothetical protein TcasGA2_TC009182 [Tribolium castaneum]
Length = 748
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++ L+V+GLP D ++ E+ IFRPF G K VRLV + R G P L +V+FE+ A A
Sbjct: 617 TNKLFVKGLPYDKSQEEIEAIFRPF-GAKTVRLVCR----RDGKPKGLAYVEFEDDASAK 671
Query: 213 TALSALQG 220
A+ G
Sbjct: 672 KAMEKTDG 679
>gi|119583864|gb|EAW63460.1| hCG2043421, isoform CRA_c [Homo sapiens]
gi|194389216|dbj|BAG65596.1| unnamed protein product [Homo sapiens]
Length = 224
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|115433500|ref|XP_001216887.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189739|gb|EAU31439.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 599
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ A
Sbjct: 404 NTLYVGNLPPDASEEELKALFIKQRGYKRLCFRNKQNG-------PMCFVEFEDVGTAGK 456
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
L L GYR+ +RL FS+NP
Sbjct: 457 TLHELYGYRLSNS--VKTGIRLSFSKNP 482
>gi|339251724|ref|XP_003372884.1| protein couch potato [Trichinella spiralis]
gi|316968731|gb|EFV52966.1| protein couch potato [Trichinella spiralis]
Length = 355
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + + P + FV F + A A A
Sbjct: 67 TLFVSGLPIDAKPRELYLLFRAYKGYESSLLKVTQKNGKATTP--IGFVTFNSRAAAEEA 124
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
+LQG + D + P +RL+F+R+
Sbjct: 125 KQSLQGVKFDPELPQP--IRLEFARS 148
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
S+TL+V L A + ++E+ +F G+ +R++ K G P+ FV++ + A
Sbjct: 264 STTLFVANLGAKTQEQELLEVFSNIPGFIRLRILHKN-----GFPV--AFVEYSDVINAN 316
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
AL+ALQG+ + D +R++F+R+ P V G GR+
Sbjct: 317 HALNALQGFVLMSSDRGG--MRIEFARS-KPAEVGGGFGRK 354
>gi|19075417|ref|NP_587917.1| RNA-binding protein Scw1 [Schizosaccharomyces pombe 972h-]
gi|26399672|sp|O74452.1|SCW1_SCHPO RecName: Full=Cell wall integrity protein scw1; AltName:
Full=Strong cell wall protein 1
gi|3560261|emb|CAA20746.1| RNA-binding protein Scw1 [Schizosaccharomyces pombe]
Length = 561
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+T+YV LP +++ E+ +F VGYK RL + +G P +CFV+FEN A
Sbjct: 426 NTIYVGNLPPSTSEEELKVLFSTQVGYK--RLCFRT---KGNGP--MCFVEFENIPYAME 478
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL LQG + +RL FS+NP
Sbjct: 479 ALKNLQGVCLSSSIKGG--IRLSFSKNP 504
>gi|297299182|ref|XP_002805345.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Macaca mulatta]
gi|297299184|ref|XP_001083170.2| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Macaca mulatta]
Length = 224
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|119583856|gb|EAW63452.1| hCG14793, isoform CRA_b [Homo sapiens]
Length = 143
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|195570023|ref|XP_002103008.1| GD19192 [Drosophila simulans]
gi|194198935|gb|EDX12511.1| GD19192 [Drosophila simulans]
Length = 221
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 58 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 115
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 116 KQDLQGVRFDPDMPQT--IRLEFAKS 139
>gi|365989942|ref|XP_003671801.1| hypothetical protein NDAI_0H03850 [Naumovozyma dairenensis CBS 421]
gi|343770574|emb|CCD26558.1| hypothetical protein NDAI_0H03850 [Naumovozyma dairenensis CBS 421]
Length = 742
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+T+ E+ +F G++ + K + G +CFV+FE+ A
Sbjct: 626 NTLYVGNLPPDATENELRQLFSCQNGFRRLSFRNKNTNGHGHGHGPMCFVEFEDINFATQ 685
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL L G ++ SK +RL FS+NP G RG
Sbjct: 686 ALGELYGSQLPRATLSSKGGIRLSFSKNP-----LGVRG 719
>gi|396474256|ref|XP_003839528.1| similar to RNA binding protein [Leptosphaeria maculans JN3]
gi|312216097|emb|CBX96049.1| similar to RNA binding protein [Leptosphaeria maculans JN3]
Length = 572
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 384 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 436
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L GY + +RL FS+NP
Sbjct: 437 ALNDLYGYMLHNSVKGG--IRLSFSKNP 462
>gi|323346831|gb|EGA81110.1| Whi3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 629
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNP 241
AL+ L G ++ SK +RL FS+ P
Sbjct: 598 ALAELYGXQLPRSTVSSKGGIRLSFSKKP 626
>gi|323335900|gb|EGA77178.1| Whi3p [Saccharomyces cerevisiae Vin13]
Length = 629
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNP 241
AL+ L G ++ SK +RL FS+ P
Sbjct: 598 ALAELYGXQLPRSTVSSKGGIRLSFSKKP 626
>gi|363754827|ref|XP_003647629.1| hypothetical protein Ecym_6441 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891266|gb|AET40812.1| hypothetical protein Ecym_6441 [Eremothecium cymbalariae
DBVPG#7215]
Length = 689
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+T++E+ +F G++ RL + G +CFV+FE+ A A
Sbjct: 567 NTLYVGNLPPDATEQELRQLFSSQKGFR--RLSFRNKNNNGNGHGPMCFVEFEDVAHATR 624
Query: 214 ALSALQGYRMDEDD--PDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ + +SK +RL FS+NP G RG
Sbjct: 625 ALAELYGSQLSRTNGSHNSKGGIRLSFSKNP-----LGVRG 660
>gi|431902282|gb|ELK08783.1| RNA-binding protein with multiple splicing [Pteropus alecto]
Length = 275
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 81 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 133
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 134 KNALNGIRFDPEIPQT--LRLEFAK 156
>gi|344281668|ref|XP_003412600.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Loxodonta africana]
Length = 196
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|194226464|ref|XP_001915758.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Equus caballus]
gi|350593440|ref|XP_003483688.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Sus scrofa]
gi|410956133|ref|XP_003984699.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Felis catus]
Length = 196
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|410925168|ref|XP_003976053.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 194
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 76
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 77 KNALNGVRFDPEIPQT--LRLEFAK 99
>gi|384501069|gb|EIE91560.1| hypothetical protein RO3G_16271 [Rhizopus delemar RA 99-880]
Length = 314
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 17/105 (16%)
Query: 143 HETLPLPPDA------SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGD 196
++ L LPP +T+YV LP+ +++ E+ +F GY+ + R
Sbjct: 202 NQELSLPPRMMDGNPPCNTIYVGNLPSTTSEDELRALFSNCKGYRRM-------CFRTKG 254
Query: 197 PLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
P+ CFV+FE+ CA+ A+ LQGY + +RL FS+NP
Sbjct: 255 PM--CFVEFEDILCASQAIKDLQGYTLSNSAKSG--VRLSFSKNP 295
>gi|119583863|gb|EAW63459.1| hCG2043421, isoform CRA_b [Homo sapiens]
gi|119583865|gb|EAW63461.1| hCG2043421, isoform CRA_b [Homo sapiens]
Length = 179
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|57164971|ref|NP_001008711.1| RNA-binding protein with multiple splicing isoform B [Homo sapiens]
gi|1669549|dbj|BAA12226.1| RBP-MS/type 2 [Homo sapiens]
gi|119583858|gb|EAW63454.1| hCG14793, isoform CRA_c [Homo sapiens]
Length = 204
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|355715882|gb|AES05433.1| RNA binding protein with multiple splicing [Mustela putorius furo]
Length = 173
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 55
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 56 KNALNGIRFDPEIPQT--LRLEFAK 78
>gi|451850380|gb|EMD63682.1| hypothetical protein COCSADRAFT_27011 [Cochliobolus sativus ND90Pr]
Length = 936
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 752 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 804
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L GY + +RL FS+NP
Sbjct: 805 ALNELYGYMLHNSVKGG--IRLSFSKNP 830
>gi|301770903|ref|XP_002920867.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Ailuropoda melanoleuca]
Length = 195
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 76
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 77 KNALNGIRFDPEIPQT--LRLEFAK 99
>gi|33342267|ref|NP_062707.1| RNA-binding protein with multiple splicing isoform 1 [Mus musculus]
gi|111185961|ref|NP_001036139.1| RNA-binding protein with multiple splicing isoform 2 [Mus musculus]
gi|20988889|gb|AAH30397.1| RNA binding protein gene with multiple splicing [Mus musculus]
gi|26334219|dbj|BAC30827.1| unnamed protein product [Mus musculus]
Length = 197
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|348553688|ref|XP_003462658.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Cavia porcellus]
Length = 196
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|293342475|ref|XP_001059526.2| PREDICTED: uncharacterized protein LOC498642 isoform 2 [Rattus
norvegicus]
Length = 197
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|336275323|ref|XP_003352414.1| hypothetical protein SMAC_01248 [Sordaria macrospora k-hell]
gi|380094302|emb|CCC07681.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 575
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K + +CFV+FE+ + A
Sbjct: 392 NTLYVGNLPIDTSEEELKAVFSKVRGYKRLCYRTKHNG-------PMCFVEFEDVSFATK 444
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G+ + +RL FS+NP
Sbjct: 445 ALNELYGHTLSNSRKGG--MRLSFSKNP 470
>gi|5803141|ref|NP_006858.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|57164969|ref|NP_001008710.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|291386102|ref|XP_002709595.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Oryctolagus cuniculus]
gi|395850272|ref|XP_003797718.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Otolemur garnettii]
gi|13124469|sp|Q93062.1|RBPMS_HUMAN RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|1669547|dbj|BAA12225.1| RBP-MS/type 1 [Homo sapiens]
gi|1669553|dbj|BAA12228.1| RBP-MS/type 4 [Homo sapiens]
gi|119583855|gb|EAW63451.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|119583857|gb|EAW63453.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|383415403|gb|AFH30915.1| RNA-binding protein with multiple splicing isoform A [Macaca
mulatta]
gi|410212520|gb|JAA03479.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253370|gb|JAA14652.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294226|gb|JAA25713.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342393|gb|JAA40143.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 196
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|395541849|ref|XP_003772849.1| PREDICTED: RNA-binding protein with multiple splicing [Sarcophilus
harrisii]
Length = 188
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 17 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 69
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 70 KNALNGIRFDPEIPQT--LRLEFAK 92
>gi|336465288|gb|EGO53528.1| hypothetical protein NEUTE1DRAFT_92899 [Neurospora tetrasperma FGSC
2508]
gi|350295585|gb|EGZ76562.1| hypothetical protein NEUTE2DRAFT_98501 [Neurospora tetrasperma FGSC
2509]
Length = 530
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK RL + +K G +CFV+FE+ + A
Sbjct: 347 NTLYVGNLPIDTSEEELKAVFSKVRGYK--RLCYR-TKHNG----PMCFVEFEDVSFATK 399
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G+ + +RL FS+NP
Sbjct: 400 ALNELYGHTLSNSRKGG--MRLSFSKNP 425
>gi|363733276|ref|XP_426296.3| PREDICTED: RNA-binding protein with multiple splicing [Gallus
gallus]
Length = 186
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 15 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 67
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 68 KNALNGIRFDPEIPQT--LRLEFAK 90
>gi|126330763|ref|XP_001372734.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Monodelphis domestica]
Length = 186
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 15 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 67
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 68 KNALNGIRFDPEIPQT--LRLEFAK 90
>gi|85114567|ref|XP_964717.1| hypothetical protein NCU00556 [Neurospora crassa OR74A]
gi|28926509|gb|EAA35481.1| hypothetical protein NCU00556 [Neurospora crassa OR74A]
Length = 530
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K + +CFV+FE+ + A
Sbjct: 347 NTLYVGNLPIDTSEEELKAVFSKVRGYKRLCYRTKHNG-------PMCFVEFEDVSFATK 399
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G+ + +RL FS+NP
Sbjct: 400 ALNELYGHTLSNSRKGG--MRLSFSKNP 425
>gi|242014736|ref|XP_002428041.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512560|gb|EEB15303.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 363
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 22 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFNTRAGAEAA 79
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
LQG R D D P + +RL+F+++
Sbjct: 80 KQDLQGVRFDPDLPQT--IRLEFAKS 103
>gi|323352890|gb|EGA85192.1| Whi3p [Saccharomyces cerevisiae VL3]
Length = 629
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ + K + G +CFV+F++ + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNP 241
AL+ L G ++ SK +RL FS+ P
Sbjct: 598 ALAELYGRQLPRSTVSSKGGIRLSFSKKP 626
>gi|326918450|ref|XP_003205501.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 233
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 62 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 114
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 115 KNALNGIRFDPEIPQT--LRLEFAK 137
>gi|388501866|gb|AFK38999.1| unknown [Medicago truncatula]
Length = 234
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++ L++E LP ++T R + +F + G+KEVRL+ E+K P I FVDFE+ ++
Sbjct: 159 NNILFIENLPYETTGRMLEMLFEQYPGFKEVRLI--EAK-----PGI-AFVDFEDDGQSS 210
Query: 213 TALSALQGYRMDEDDP 228
A+ ALQG+++ +P
Sbjct: 211 MAMQALQGFKITPQNP 226
>gi|148703476|gb|EDL35423.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
gi|148703477|gb|EDL35424.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
Length = 175
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 55
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 56 KNALNGIRFDPEIPQT--LRLEFAK 78
>gi|354474967|ref|XP_003499701.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Cricetulus griseus]
Length = 181
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 9 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 61
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 62 KNALNGIRFDPEIPQT--LRLEFAK 84
>gi|357491327|ref|XP_003615951.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
gi|355517286|gb|AES98909.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
gi|388501104|gb|AFK38618.1| unknown [Medicago truncatula]
Length = 233
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++ L++E LP ++T R + +F + G+KEVRL+ E+K P I FVDFE+ ++
Sbjct: 158 NNILFIENLPYETTGRMLEMLFEQYPGFKEVRLI--EAK-----PGI-AFVDFEDDGQSS 209
Query: 213 TALSALQGYRMDEDDP 228
A+ ALQG+++ +P
Sbjct: 210 MAMQALQGFKITPQNP 225
>gi|26347873|dbj|BAC37585.1| unnamed protein product [Mus musculus]
Length = 170
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|432919028|ref|XP_004079709.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 194
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ + A A
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVSFDSRSEAEAA 76
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 77 KNALNGVRFDPEIPQT--LRLEFAK 99
>gi|395850274|ref|XP_003797719.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Otolemur garnettii]
Length = 242
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|50555840|ref|XP_505328.1| YALI0F12375p [Yarrowia lipolytica]
gi|49651198|emb|CAG78135.1| YALI0F12375p [Yarrowia lipolytica CLIB122]
Length = 625
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 38/145 (26%)
Query: 126 SSSIDDQLPFDAAARPGHET---LPLPPDASST--------------------------L 156
++S+DD P D +A PG + +P P +ST L
Sbjct: 457 TNSVDDLPPIDTSAGPGAASRIVVPYSPTNASTTIQVLQNGGRVLPPANPADQNPPCNTL 516
Query: 157 YVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALS 216
YV LP ++T+ E+ +F GYK RL + +K+ G +CFV+FEN A+ AL+
Sbjct: 517 YVGNLPMNTTEEELMQLFSKQKGYK--RLCFR-TKMNG----PMCFVEFENVMYASKALN 569
Query: 217 ALQGYRMDEDDPDSKFLRLQFSRNP 241
L G + +RL FS+NP
Sbjct: 570 ELYGKGLKYSVKGG--IRLSFSKNP 592
>gi|45185072|ref|NP_982789.1| ABL158Cp [Ashbya gossypii ATCC 10895]
gi|44980708|gb|AAS50613.1| ABL158Cp [Ashbya gossypii ATCC 10895]
gi|374105991|gb|AEY94901.1| FABL158Cp [Ashbya gossypii FDAG1]
Length = 729
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+T++E+ +F G++ RL + G +CFV+FE+ A A
Sbjct: 607 NTLYVGNLPPDATEQELRQLFSSQKGFR--RLSFRNKNNNGNGHGPMCFVEFEDVAHATR 664
Query: 214 ALSALQG---YRMDEDDPDSKFLRLQFSRNPGPRSVFGARG 251
AL+ L G R + +RL FS+NP G RG
Sbjct: 665 ALAELYGSQLARTSGTHNNKGGIRLSFSKNP-----LGVRG 700
>gi|114052324|ref|NP_001040000.1| RNA-binding protein with multiple splicing [Bos taurus]
gi|86438185|gb|AAI12765.1| RNA binding protein with multiple splicing [Bos taurus]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|348525747|ref|XP_003450383.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 194
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 76
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 77 KNALNGVRFDPEIPQT--LRLEFAK 99
>gi|344281670|ref|XP_003412601.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Loxodonta africana]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|338720949|ref|XP_003364277.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Equus caballus]
gi|350593442|ref|XP_003133441.3| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Sus scrofa]
gi|410956131|ref|XP_003984698.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Felis catus]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|397521591|ref|XP_003830876.1| PREDICTED: RNA-binding protein with multiple splicing [Pan
paniscus]
Length = 218
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 64 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 116
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 117 KNALNGIRFDPEIPQT--LRLEFAK 139
>gi|390473655|ref|XP_002756964.2| PREDICTED: RNA-binding protein with multiple splicing [Callithrix
jacchus]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|403294314|ref|XP_003938139.1| PREDICTED: RNA-binding protein with multiple splicing [Saimiri
boliviensis boliviensis]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|332240824|ref|XP_003269587.1| PREDICTED: RNA-binding protein with multiple splicing [Nomascus
leucogenys]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|296472388|tpg|DAA14503.1| TPA: RNA-binding protein with multiple splicing [Bos taurus]
gi|440895026|gb|ELR47324.1| RNA-binding protein with multiple splicing [Bos grunniens mutus]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|348553686|ref|XP_003462657.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Cavia porcellus]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|57164973|ref|NP_001008712.1| RNA-binding protein with multiple splicing isoform C [Homo sapiens]
gi|332825789|ref|XP_001167950.2| PREDICTED: RNA-binding protein with multiple splicing [Pan
troglodytes]
gi|345781578|ref|XP_532815.3| PREDICTED: RNA-binding protein with multiple splicing [Canis lupus
familiaris]
gi|395739552|ref|XP_002819013.2| PREDICTED: RNA-binding protein with multiple splicing [Pongo
abelii]
gi|1669551|dbj|BAA12227.1| RBP-MS/type 3 [Homo sapiens]
gi|13177644|gb|AAH03608.1| RNA binding protein with multiple splicing [Homo sapiens]
gi|119583866|gb|EAW63462.1| hCG2043421, isoform CRA_d [Homo sapiens]
gi|261858762|dbj|BAI45903.1| RNA binding protein with multiple splicing [synthetic construct]
gi|383415405|gb|AFH30916.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|387541276|gb|AFJ71265.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|410212518|gb|JAA03478.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410212522|gb|JAA03480.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253368|gb|JAA14651.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253372|gb|JAA14653.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294224|gb|JAA25712.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294228|gb|JAA25714.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342391|gb|JAA40142.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342395|gb|JAA40144.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|62203475|gb|AAH92476.1| RNA binding protein with multiple splicing [Homo sapiens]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|417397319|gb|JAA45693.1| Putative rna-binding protein with multiple splicing-like isoform 2
equus caballus [Desmodus rotundus]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|291386104|ref|XP_002709596.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Oryctolagus cuniculus]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|111185959|ref|NP_001036140.1| RNA-binding protein with multiple splicing isoform 3 [Mus musculus]
gi|403420640|ref|NP_001258173.1| RNA-binding protein with multiple splicing [Rattus norvegicus]
gi|12848898|dbj|BAB28128.1| unnamed protein product [Mus musculus]
gi|12849426|dbj|BAB28336.1| unnamed protein product [Mus musculus]
Length = 220
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|213405979|ref|XP_002173761.1| cell wall integrity protein scw1 [Schizosaccharomyces japonicus
yFS275]
gi|212001808|gb|EEB07468.1| cell wall integrity protein scw1 [Schizosaccharomyces japonicus
yFS275]
Length = 565
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 90/215 (41%), Gaps = 39/215 (18%)
Query: 55 PLKDTSTIGSAYDRYLQSAQYSSFTSGEA----SAFSGDRLRRAVPGGVTRLP------- 103
P +T T+ S+ D + S + S S D+ A P G T+ P
Sbjct: 313 PWMNTPTLKSSTDTPNSKHSFQSLSINTNFSNRSPLSPDKFYHASPLGSTQSPRFRAFTA 372
Query: 104 ------VSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDA-AARPGHETLPL-------P 149
VS P G T D + +SS+ PF + H+ P+ P
Sbjct: 373 NVGERSVSPPLTPGSFTPTHRDFL--YSASSMSPNTPFAPFVSHSFHQRAPVTTPVNINP 430
Query: 150 PDAS---STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
D + +T+YV LP +++ E+ +F GYK RL + +G P+ CFV+FE
Sbjct: 431 ADQNPPCNTIYVGNLPPSTSEDELKALFSTQPGYK--RLCFRT---KGNGPM--CFVEFE 483
Query: 207 NPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+ A A AL ALQG + +RL FS+NP
Sbjct: 484 SIAYATEALKALQGVCLSSSVKGG--IRLSFSKNP 516
>gi|402877940|ref|XP_003902666.1| PREDICTED: RNA-binding protein with multiple splicing, partial
[Papio anubis]
Length = 268
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 74 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 126
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 127 KNALNGIRFDPEIPQT--LRLEFAK 149
>gi|426256354|ref|XP_004021805.1| PREDICTED: RNA-binding protein with multiple splicing [Ovis aries]
Length = 198
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 4 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 56
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 57 KNALNGIRFDPEIPQT--LRLEFAK 79
>gi|440472158|gb|ELQ41041.1| RNA binding protein [Magnaporthe oryzae Y34]
Length = 622
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 141 PGHETLPLPPD----ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGD 196
PGH P+ P +TLYV LP D+++ E+ F GYK + K++
Sbjct: 401 PGHSFPPVNPADQNPPCNTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNG----- 455
Query: 197 PLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+CFV+FE+ + A AL L G+ + +RL FS+NP
Sbjct: 456 --PMCFVEFEDVSFATKALHELYGHMLHNSVKGG--IRLSFSKNP 496
>gi|410080362|ref|XP_003957761.1| hypothetical protein KAFR_0F00290 [Kazachstania africana CBS 2517]
gi|372464348|emb|CCF58626.1| hypothetical protein KAFR_0F00290 [Kazachstania africana CBS 2517]
Length = 680
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKL----RGGDPLILCFVDFENPA 209
+TLYV LP D+T++E+ +F G++ RL K + G P +CFV+F++ +
Sbjct: 556 NTLYVGNLPPDATEQELRQLFSSQEGFR--RLSFKNKSIPGHGHGHGP--MCFVEFDDVS 611
Query: 210 CAATALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
+ AL+ L G ++ +SK +RL FS+NP G RG
Sbjct: 612 FSTRALAKLYGSQLPRSTINSKGGIRLSFSKNP-----LGVRG 649
>gi|281347421|gb|EFB23005.1| hypothetical protein PANDA_009679 [Ailuropoda melanoleuca]
gi|351701272|gb|EHB04191.1| RNA-binding protein with multiple splicing, partial [Heterocephalus
glaber]
gi|355697845|gb|EHH28393.1| hypothetical protein EGK_18822, partial [Macaca mulatta]
gi|355779616|gb|EHH64092.1| hypothetical protein EGM_17218, partial [Macaca fascicularis]
Length = 198
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 4 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 56
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 57 KNALNGIRFDPEIPQT--LRLEFAK 79
>gi|389645993|ref|XP_003720628.1| RNA binding protein [Magnaporthe oryzae 70-15]
gi|86196803|gb|EAQ71441.1| hypothetical protein MGCH7_ch7g848 [Magnaporthe oryzae 70-15]
gi|351638020|gb|EHA45885.1| RNA binding protein [Magnaporthe oryzae 70-15]
gi|440479486|gb|ELQ60251.1| RNA binding protein [Magnaporthe oryzae P131]
Length = 622
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 141 PGHETLPLPPD----ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGD 196
PGH P+ P +TLYV LP D+++ E+ F GYK + K++
Sbjct: 401 PGHSFPPVNPADQNPPCNTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNG----- 455
Query: 197 PLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+CFV+FE+ + A AL L G+ + +RL FS+NP
Sbjct: 456 --PMCFVEFEDVSFATKALHELYGHMLHNSVKGG--IRLSFSKNP 496
>gi|119583862|gb|EAW63458.1| hCG2043421, isoform CRA_a [Homo sapiens]
Length = 200
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 6 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 58
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 59 KNALNGIRFDPEIPQT--LRLEFAK 81
>gi|13124485|sp|Q9WVB0.1|RBPMS_MOUSE RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|5081739|gb|AAD39515.1|AF148511_1 hermes [Mus musculus]
Length = 197
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVSFDSRSEAEAA 77
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LR++F++
Sbjct: 78 KNALNGIRFDPEIPQT--LRIEFAK 100
>gi|156402885|ref|XP_001639820.1| predicted protein [Nematostella vectensis]
gi|156226951|gb|EDO47757.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++ L++ LP ++T+ ++ +F F G+KEVRLV S + FV+FEN A
Sbjct: 134 NNILFLTNLPMETTELMLSMLFNQFPGFKEVRLVPGRSD--------ISFVEFENEVQAG 185
Query: 213 TALSALQGYRM 223
TA ALQG+R+
Sbjct: 186 TAKDALQGFRI 196
>gi|297824861|ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata]
gi|297326152|gb|EFH56572.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata]
Length = 249
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 132 QLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK 191
Q+P+ +P P PP+ + L+V+ LP ++T + +F + G+KEVR+V E+K
Sbjct: 156 QVPYPGGVKPNLPEAPAPPN--NILFVQNLPHETTPMVLQMLFYQYQGFKEVRMV--EAK 211
Query: 192 LRGGDPLILCFVDFENPACAATALSALQGYRMDEDD 227
P I FV+F + + A+ LQG+++ ++
Sbjct: 212 -----PGI-AFVEFADEMQSTVAMQGLQGFKIQQNQ 241
>gi|148703479|gb|EDL35426.1| RNA binding protein gene with multiple splicing, isoform CRA_c [Mus
musculus]
Length = 198
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 55
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 56 KNALNGIRFDPEIPQT--LRLEFAK 78
>gi|167537765|ref|XP_001750550.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770971|gb|EDQ84646.1| predicted protein [Monosiga brevicollis MX1]
Length = 345
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 16/91 (17%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI--LCFVDFENP 208
D S L++E LP+D T+ + +F+ F G+KEVRLV P+ + FV++EN
Sbjct: 267 DPSPILFLENLPSDRTQEMLTALFKEFPGFKEVRLV----------PIRPDIGFVEYENE 316
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A+ AL AL G E P +K +R+ FS+
Sbjct: 317 VQASAALPALNG---KEVTPGNK-MRVSFSK 343
>gi|413953214|gb|AFW85863.1| nucleic acid binding protein [Zea mays]
Length = 248
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK 191
+ S+ L+V+ LP D T+REVAH+FR F G+K++R+V KE +
Sbjct: 190 NESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPR 230
>gi|225683351|gb|EEH21635.1| RNA-binding protein Scw1 [Paracoccidioides brasiliensis Pb03]
Length = 594
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 392 NTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQNG-------PMCFVEFEDISFATK 444
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L GY++ +RL FS+NP
Sbjct: 445 ALHELYGYQLSNSVKGG--IRLSFSKNP 470
>gi|367007687|ref|XP_003688573.1| hypothetical protein TPHA_0O01720 [Tetrapisispora phaffii CBS 4417]
gi|357526882|emb|CCE66139.1| hypothetical protein TPHA_0O01720 [Tetrapisispora phaffii CBS 4417]
Length = 619
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+D+T++E+ +F G++ RL + G +CFV+F++ + A
Sbjct: 499 NTLYVGNLPSDATEQELRQLFSVQQGFR--RLSFRNKNNNGNGHGPICFVEFDDVSFATR 556
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
AL+ L G ++ +K +RL FS+NP G RG
Sbjct: 557 ALAELYGSQLPSATVSNKGGIRLSFSKNP-----LGVRG 590
>gi|261201640|ref|XP_002628034.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239590131|gb|EEQ72712.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|327352905|gb|EGE81762.1| RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 591
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK RL + K G +CFV+FE+ + A
Sbjct: 393 NTLYVGNLPHDTSEDELKALFTKQRGYK--RLCFRN-KQNG----PMCFVEFEDISFATK 445
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L GY++ +RL FS+NP
Sbjct: 446 ALHELYGYQLSNSVKGG--IRLSFSKNP 471
>gi|226286959|gb|EEH42472.1| RNA binding protein [Paracoccidioides brasiliensis Pb18]
Length = 582
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 380 NTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQNG-------PMCFVEFEDISFATK 432
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L GY++ +RL FS+NP
Sbjct: 433 ALHELYGYQLSNSVKGG--IRLSFSKNP 458
>gi|148703478|gb|EDL35425.1| RNA binding protein gene with multiple splicing, isoform CRA_b [Mus
musculus]
Length = 227
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F++ + A A
Sbjct: 32 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 84
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+AL G R D + P + LRL+F++
Sbjct: 85 KNALNGIRFDPEIPQT--LRLEFAK 107
>gi|339260634|ref|XP_003368308.1| protein couch potato [Trichinella spiralis]
gi|316959609|gb|EFV47705.1| protein couch potato [Trichinella spiralis]
Length = 155
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + + P + FV F + A A A
Sbjct: 3 TLFVSGLPIDAKPRELYLLFRAYKGYESSLLKVTQKNGKATTP--IGFVTFNSRAAAEEA 60
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRN 240
+LQG + D + P +RL+F+R+
Sbjct: 61 KQSLQGVKFDPELPQP--IRLEFARS 84
>gi|190344482|gb|EDK36163.2| hypothetical protein PGUG_00261 [Meyerozyma guilliermondii ATCC
6260]
Length = 589
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI------LCFVDFEN 207
+TLYV LP D+T+ E+ +F P G++ + K G +CFV+FE+
Sbjct: 456 NTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSAGPSSATSHNHGPMCFVEFED 515
Query: 208 PACAATALSALQGYRMDEDDPDS--KFLRLQFSRNPGPRSVFGARG 251
A A AL+ L G + + + +RL FS+NP G RG
Sbjct: 516 VAHATRALAELYGRALPRPNGSNGKGGIRLSFSKNP-----LGVRG 556
>gi|342882619|gb|EGU83235.1| hypothetical protein FOXB_06235 [Fusarium oxysporum Fo5176]
Length = 454
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 131 DQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES 190
+Q PF P T P + TLYV LP D+ + E+ +F GYK RL +
Sbjct: 275 NQSPFGRMNYPHANTADQNPPCN-TLYVGNLPMDTAEEELKTLFSKQRGYK--RLCFRT- 330
Query: 191 KLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+G P +CFV+FE+ A+ AL+ L G + + +RL FS+NP
Sbjct: 331 --KGNGP--MCFVEFEDIPFASKALTELYGKLLSNSNKGG--IRLSFSKNP 375
>gi|295657738|ref|XP_002789435.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283857|gb|EEH39423.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 583
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 381 NTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQNG-------PMCFVEFEDISFATK 433
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L GY++ +RL FS+NP
Sbjct: 434 ALHELYGYQLSNSVKGG--IRLSFSKNP 459
>gi|255636731|gb|ACU18701.1| unknown [Glycine max]
Length = 195
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
+ D S++YV GLP D+T+ + +F + +V+ +I + + RG CFV F N
Sbjct: 1 MTMDDDSSIYVGGLPYDATEETIRTVFNLYGAILDVK-IINDPRTRGK---CYCFVTFTN 56
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFG 248
P A A++ + G + D + +++ R G RS FG
Sbjct: 57 PRSAIDAINDMNGRTI-----DGRVVKVNGVRTRGGRSNFG 92
>gi|67901426|ref|XP_680969.1| hypothetical protein AN7700.2 [Aspergillus nidulans FGSC A4]
gi|40742696|gb|EAA61886.1| hypothetical protein AN7700.2 [Aspergillus nidulans FGSC A4]
gi|259484045|tpe|CBF79932.1| TPA: RNA binding protein (AFU_orthologue; AFUA_5G08330)
[Aspergillus nidulans FGSC A4]
Length = 628
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+ + E+ +F GYK + K++ +CFV+FE+ A
Sbjct: 413 NTLYVGNLPPDTQEEELKALFSKQRGYKRLCFRNKQNG-------PMCFVEFEDVRTAGK 465
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
L+ L GY++ +RL FS+NP
Sbjct: 466 TLNELYGYKLSNSIKTG--IRLSFSKNP 491
>gi|453085210|gb|EMF13253.1| hypothetical protein SEPMUDRAFT_148613 [Mycosphaerella populorum
SO2202]
Length = 568
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK RL + +K +G +CFV+FE+ + A
Sbjct: 375 NTLYVGNLPVDTSEDELKALFSKVRGYK--RLCFR-TKHQGS----MCFVEFEDVSFATK 427
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G + +RL FS+NP
Sbjct: 428 ALNELYGIPLHNSTKGG--IRLSFSKNP 453
>gi|384493858|gb|EIE84349.1| hypothetical protein RO3G_09059 [Rhizopus delemar RA 99-880]
Length = 387
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP+ + + E+ +F GYK + IK S +G +CFV+FE+ A
Sbjct: 282 NTLYVGNLPSSTNQEELRSLFSKCEGYKRMSFRIK-SPQQGP----MCFVEFEDVLYATQ 336
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A++ LQG+ + +RL FS+NP
Sbjct: 337 AMTQLQGHALSNSVKGG--IRLSFSKNP 362
>gi|240277155|gb|EER40664.1| RNA binding protein [Ajellomyces capsulatus H143]
gi|325093977|gb|EGC47287.1| RNA binding protein [Ajellomyces capsulatus H88]
Length = 509
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 311 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNG-------PMCFVEFEDISFATK 363
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L GY++ +RL FS+NP
Sbjct: 364 ALHELYGYQLSNSVKGG--IRLSFSKNP 389
>gi|225558198|gb|EEH06482.1| RNA binding protein [Ajellomyces capsulatus G186AR]
Length = 591
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK RL + +K G +CFV+FE+ + A
Sbjct: 393 NTLYVGNLPHDTSEDELKALFTKQRGYK--RLCFR-NKQNG----PMCFVEFEDISFATK 445
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L GY++ +RL FS+NP
Sbjct: 446 ALHELYGYQLSNSVKGG--IRLSFSKNP 471
>gi|359806644|ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
gi|255647802|gb|ACU24361.1| unknown [Glycine max]
Length = 232
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 11/88 (12%)
Query: 141 PGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL 200
PG + P ++ L++E LP ++T R + +F + G+KEVRL+ E+K P I
Sbjct: 148 PGAQETAAP---NNILFIENLPHETTGRMLEMLFEQYPGFKEVRLI--EAK-----PGI- 196
Query: 201 CFVDFENPACAATALSALQGYRMDEDDP 228
FVDFE+ ++ A+ AL G+++ +P
Sbjct: 197 AFVDFEDEVQSSMAMQALHGFKITPQNP 224
>gi|239611843|gb|EEQ88830.1| RNA binding protein [Ajellomyces dermatitidis ER-3]
Length = 531
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 382 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNG-------PMCFVEFEDISFATK 434
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L GY++ +RL FS+NP
Sbjct: 435 ALHELYGYQLSNSVKGG--IRLSFSKNP 460
>gi|154285786|ref|XP_001543688.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407329|gb|EDN02870.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 408
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 210 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNG-------PMCFVEFEDISFATK 262
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L GY++ +RL FS+NP
Sbjct: 263 ALHELYGYQLSNSVKGG--IRLSFSKNP 288
>gi|148529834|gb|ABQ82149.1| RNA binding protein with multiple splicing 2, partial [Equus
caballus]
Length = 177
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 157 YVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALS 216
+V GLP D RE+ +FRPF GY E L+ KL P + FV F++ A A A +
Sbjct: 1 FVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSRQP--VGFVIFDSRAGAEAAKN 53
Query: 217 ALQGYRMDEDDPDSKFLRLQFSR 239
AL G R D ++P + LRL+F++
Sbjct: 54 ALNGIRFDPENPQT--LRLEFAK 74
>gi|340519782|gb|EGR50020.1| predicted protein [Trichoderma reesei QM6a]
Length = 660
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+ + E+ +F GYK + IK + +CFV++E+ A A
Sbjct: 445 NTLYVGNLPMDACEDELKVLFSLTKGYKRMCFRIKHNG-------PMCFVEYEDIAHATK 497
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G+ + +RL FS+NP
Sbjct: 498 ALTTLYGFPLHNSVKGG--IRLSFSKNP 523
>gi|344229622|gb|EGV61507.1| hypothetical protein CANTEDRAFT_94398 [Candida tenuis ATCC 10573]
Length = 526
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGG--DPLILCFVDFENPACA 211
+TLYV LP D+T++E+ +F P G++ + K + G + +CFV+FE+ A A
Sbjct: 407 NTLYVGNLPPDATEQELRALFSPQKGFRRLSFRTKANASGSGSNNHGPMCFVEFEDVAHA 466
Query: 212 ATALSALQGYRMDEDDPDSKF----LRLQFSRNPGPRSVFGARGRR 253
AL+ L G + P S +RL FS+NP G RG +
Sbjct: 467 TRALAELYGRILPR--PSSSNGKGGIRLSFSKNP-----LGVRGSQ 505
>gi|326669776|ref|XP_003199078.1| PREDICTED: RNA-binding protein with multiple splicing-like [Danio
rerio]
Length = 183
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ SK G FV F + + A A
Sbjct: 22 TLFVSGLPMDIKPRELYLLFRPFQGY-EGSLIKFTSKQPVG------FVSFSSRSEAEAA 74
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+ L G R D D P + LRL+F++
Sbjct: 75 KNRLNGVRFDPDVPQT--LRLEFAK 97
>gi|302921099|ref|XP_003053217.1| hypothetical protein NECHADRAFT_67581 [Nectria haematococca mpVI
77-13-4]
gi|256734157|gb|EEU47504.1| hypothetical protein NECHADRAFT_67581 [Nectria haematococca mpVI
77-13-4]
Length = 574
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LPAD+++ E+ +F GYK RL + +K G +CFV+FE + A
Sbjct: 292 NTLYVGNLPADTSEEELKALFIKQRGYK--RLCFR-TKANG----PMCFVEFEEVSFATK 344
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G+ + +RL FS+NP
Sbjct: 345 ALHDLYGHPLHNSTKGG--IRLSFSKNP 370
>gi|146421882|ref|XP_001486884.1| hypothetical protein PGUG_00261 [Meyerozyma guilliermondii ATCC
6260]
Length = 589
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI------LCFVDFEN 207
+TLYV LP D+T+ E+ +F P G++ + K G +CFV+FE+
Sbjct: 456 NTLYVGNLPPDATEAELRALFLPQKGFRRLSFRTKNQSSAGPSSATSHNHGPMCFVEFED 515
Query: 208 PACAATALSALQGYRMDEDDPDS--KFLRLQFSRNPGPRSVFGARG 251
A A AL+ L G + + + +RL FS+NP G RG
Sbjct: 516 VAHATRALAELYGRALPRPNGSNGKGGIRLSFSKNP-----LGVRG 556
>gi|302660324|ref|XP_003021842.1| RNA binding protein [Trichophyton verrucosum HKI 0517]
gi|291185760|gb|EFE41224.1| RNA binding protein [Trichophyton verrucosum HKI 0517]
Length = 654
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK R++ ++ K G +CFV+FE+ + A
Sbjct: 427 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ-KPNG----PICFVEFEDVSFATK 479
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
L+ L GY + +RL FS+NP
Sbjct: 480 CLTELYGYELSNSVKGG--IRLSFSKNP 505
>gi|302505920|ref|XP_003014917.1| RNA binding protein [Arthroderma benhamiae CBS 112371]
gi|291178488|gb|EFE34277.1| RNA binding protein [Arthroderma benhamiae CBS 112371]
Length = 655
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK R++ ++ K G +CFV+FE+ + A
Sbjct: 428 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ-KPNG----PICFVEFEDVSFATK 480
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
L+ L GY + +RL FS+NP
Sbjct: 481 CLTELYGYELSNSVKGG--IRLSFSKNP 506
>gi|154303210|ref|XP_001552013.1| hypothetical protein BC1G_09625 [Botryotinia fuckeliana B05.10]
Length = 266
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 70 NTLYVGNLPIDTSEDELKSMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 122
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G+ + +RL FS+NP
Sbjct: 123 ALHELYGHPLHNSIKGG--IRLSFSKNP 148
>gi|15226631|ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]
gi|75319458|sp|Q39244.1|RU1A_ARATH RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|1050430|emb|CAA90283.1| U1snRNP-specific protein [Arabidopsis thaliana]
gi|2529669|gb|AAC62852.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|15450591|gb|AAK96567.1| At2g47580/T30B22.12 [Arabidopsis thaliana]
gi|16649011|gb|AAL24357.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|20259986|gb|AAM13340.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|22655484|gb|AAM98334.1| At2g47580/T30B22.12 [Arabidopsis thaliana]
gi|330255767|gb|AEC10861.1| spliceosomal protein U1A [Arabidopsis thaliana]
Length = 250
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 132 QLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK 191
Q+P+ +P P PP+ + L+V+ LP ++T + +F + G+KEVR++ E+K
Sbjct: 157 QVPYPGGMKPNMPEAPAPPN--NILFVQNLPHETTPMVLQMLFCQYQGFKEVRMI--EAK 212
Query: 192 LRGGDPLILCFVDFENPACAATALSALQGYRMDEDD 227
P I FV+F + + A+ LQG+++ ++
Sbjct: 213 -----PGI-AFVEFADEMQSTVAMQGLQGFKIQQNQ 242
>gi|327293680|ref|XP_003231536.1| RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326466164|gb|EGD91617.1| RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 556
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK R++ ++ K G +CFV+FE+ + A
Sbjct: 329 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ-KPNG----PICFVEFEDVSFATK 381
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
L+ L GY + +RL FS+NP
Sbjct: 382 CLTELYGYELSNSVKGG--IRLSFSKNP 407
>gi|296411285|ref|XP_002835364.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629142|emb|CAZ79521.1| unnamed protein product [Tuber melanosporum]
Length = 598
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LPA++T+ E+ ++F GYK + K++ +CFV+FE+ A
Sbjct: 377 NTLYVGNLPANTTEDELKNLFCRQRGYKRLCFRAKQNG-------PMCFVEFEDIGMATK 429
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G + +RL FS+NP
Sbjct: 430 ALTELYGRNLSTSVKGG--IRLSFSKNP 455
>gi|156120369|ref|NP_001095330.1| squamous cell carcinoma antigen recognized by T-cells 3 [Bos
taurus]
gi|154425531|gb|AAI51266.1| SART3 protein [Bos taurus]
Length = 957
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V GLP TK E+ I R K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFVSGLPFSCTKEELEEICRAHGTVKDIRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + + PG PR V+GARG+
Sbjct: 859 LKMDGMTIRENVIKVAISNPPQRKVPEKPEARKAPGSALLPRQVYGARGK 908
>gi|255564206|ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
gi|223537662|gb|EEF39285.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
Length = 254
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 132 QLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK 191
Q+P+ A+ P PP+ + L+++ LP D+T + +F+ + G+KEVR+V ESK
Sbjct: 161 QIPYPGGAKSMVPEAPAPPN--NILFIQNLPNDTTTMVLQMLFQHYAGFKEVRMV--ESK 216
Query: 192 LRGGDPLILCFVDFENPACAATALSALQGYRMDED 226
P I FV++ + + A+ LQG ++ ++
Sbjct: 217 -----PGI-AFVEYADEMQSTVAMQGLQGLKIQQN 245
>gi|326479306|gb|EGE03316.1| RNA binding protein [Trichophyton equinum CBS 127.97]
Length = 543
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK R++ ++ K G +CFV+FE+ + A
Sbjct: 340 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ-KPNG----PICFVEFEDVSFATK 392
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
L+ L GY + +RL FS+NP
Sbjct: 393 CLTELYGYELSNSVKGG--IRLSFSKNP 418
>gi|350632868|gb|EHA21235.1| hypothetical protein ASPNIDRAFT_54716 [Aspergillus niger ATCC 1015]
Length = 611
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+F++ A
Sbjct: 406 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNG-------PMCFVEFDDVGTAGK 458
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G ++ +RL FS+NP
Sbjct: 459 ALNELYGVKLSNS--IKTGIRLSFSKNP 484
>gi|358374685|dbj|GAA91275.1| RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 609
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+F++ A
Sbjct: 404 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNG-------PMCFVEFDDVGTAGK 456
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G ++ +RL FS+NP
Sbjct: 457 ALNELYGVKLSNS--IKTGIRLSFSKNP 482
>gi|145235395|ref|XP_001390346.1| RNA binding protein [Aspergillus niger CBS 513.88]
gi|134058028|emb|CAK38257.1| unnamed protein product [Aspergillus niger]
Length = 611
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+F++ A
Sbjct: 406 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNG-------PMCFVEFDDVGTAGK 458
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G ++ +RL FS+NP
Sbjct: 459 ALNELYGVKLSNS--IKTGIRLSFSKNP 484
>gi|367003990|ref|XP_003686728.1| hypothetical protein TPHA_0H00860 [Tetrapisispora phaffii CBS 4417]
gi|357525030|emb|CCE64294.1| hypothetical protein TPHA_0H00860 [Tetrapisispora phaffii CBS 4417]
Length = 588
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+T++E+ +F G++ RL + G +CFV+F++ + A
Sbjct: 451 NTLYVGNLPPDATEQELRQLFSSQPGFR--RLSFRNKNNNGNGHGPMCFVEFDDVSFATV 508
Query: 214 ALSALQGYRMDEDDPDSK-FLRLQFSRNP----GPRS 245
AL+ L G ++ +K +RL FS+NP GP+S
Sbjct: 509 ALAELYGRQLPRPVISNKGGIRLSFSKNPLGVRGPKS 545
>gi|296816757|ref|XP_002848715.1| RNA binding protein [Arthroderma otae CBS 113480]
gi|238839168|gb|EEQ28830.1| RNA binding protein [Arthroderma otae CBS 113480]
Length = 621
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK R++ ++ K G +CFV+FE+ + A
Sbjct: 399 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ-KPNG----PICFVEFEDVSFATK 451
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
L+ L GY + +RL FS+NP
Sbjct: 452 CLTELYGYELSNSVKGG--IRLSFSKNP 477
>gi|347839385|emb|CCD53957.1| hypothetical protein [Botryotinia fuckeliana]
Length = 545
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 349 NTLYVGNLPIDTSEDELKSMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 401
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G+ + +RL FS+NP
Sbjct: 402 ALHELYGHPLHNSIKGG--IRLSFSKNP 427
>gi|239790913|dbj|BAH71988.1| ACYPI002883 [Acyrthosiphon pisum]
Length = 169
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V+GLP TK ++ +IF+P+ K+VR+V R G L +VDFE+ AA AL
Sbjct: 23 LFVKGLPFTCTKTDIENIFKPYGALKDVRVVT----FRNGHSKGLAYVDFEDEVSAAQAL 78
>gi|388497184|gb|AFK36658.1| unknown [Medicago truncatula]
Length = 232
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 21/123 (17%)
Query: 106 DPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADS 165
+P+ G +GAT P L Q+P+ A+ P PP+ + L+++ LP ++
Sbjct: 123 NPAYAGAYGAT-PAL----------SQIPYPGGAKSLLPEAPAPPN--NILFIQNLPNET 169
Query: 166 TKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDE 225
T + +F + G+KEVR+V E+K P I FV++ + + A+ ALQG+++
Sbjct: 170 TPMMLQMLFLQYPGFKEVRMV--EAK-----PGI-AFVEYGDEMQSTMAMQALQGFKIAP 221
Query: 226 DDP 228
+P
Sbjct: 222 QNP 224
>gi|224068352|ref|XP_002302719.1| predicted protein [Populus trichocarpa]
gi|222844445|gb|EEE81992.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 132 QLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK 191
Q+P+ + P PP+ + L+++ LP ++T + +F+ + G+KEVR+V E+K
Sbjct: 158 QIPYLGGVKSMVPEAPAPPN--NILFIQNLPNETTTMMLQMLFQQYAGFKEVRMV--ETK 213
Query: 192 LRGGDPLILCFVDFENPACAATALSALQGYRMDED 226
P I FV++ + + A+ ALQG+++ ++
Sbjct: 214 -----PGI-AFVEYGDEMQSTVAMHALQGFKLQQN 242
>gi|399218844|emb|CCF75731.1| unnamed protein product [Babesia microti strain RI]
Length = 199
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPA 209
P T++VE LP D+T+R V +F + GY R ++ RG + FVD+E
Sbjct: 122 PQDVHTIFVENLPPDTTQRAVEILFSQYPGYVGCRFILD----RG-----VAFVDYEKSV 172
Query: 210 CAATALSALQGYRMDEDDPDS 230
A + LQG+R+ D P S
Sbjct: 173 QAEVTIQGLQGFRITPDFPIS 193
>gi|217072842|gb|ACJ84781.1| unknown [Medicago truncatula]
Length = 245
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 21/123 (17%)
Query: 106 DPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADS 165
+P+ G +GAT P L Q+P+ A+ P PP+ + L+++ LP ++
Sbjct: 136 NPAYAGAYGAT-PAL----------SQIPYPGGAKSLLPEAPAPPN--NILFIQNLPNET 182
Query: 166 TKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDE 225
T + +F + G+KEVR+V E+K P I FV++ + + A+ ALQG+++
Sbjct: 183 TPMMLQMLFLQYPGFKEVRMV--EAK-----PGI-AFVEYGDEMQSTMAMQALQGFKIAP 234
Query: 226 DDP 228
+P
Sbjct: 235 QNP 237
>gi|116781538|gb|ABK22144.1| unknown [Picea sitchensis]
Length = 235
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
Query: 140 RPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI 199
+P + P PP+ + L+++ LP ++T + +F+ + G+KEVR++ E+K P I
Sbjct: 149 KPSSQEPPAPPN--NILFIQNLPHETTTMMLQMLFQQYPGFKEVRMI--EAK-----PGI 199
Query: 200 LCFVDFENPACAATALSALQGYRMDEDDP 228
FV++ + A+ A+ ALQG+++ +P
Sbjct: 200 -AFVEYGDEMQASVAMQALQGFKITPQNP 227
>gi|310791144|gb|EFQ26673.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 539
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 357 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVSFATK 409
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G+ + +RL FS+NP
Sbjct: 410 ALHELYGHPLHNSVKGG--IRLSFSKNP 435
>gi|350597108|ref|XP_003362224.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Sus scrofa]
Length = 262
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP T+ E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 102 LFISGLPFSCTREELEEICKAHGTVKDIRLVTN----RAGKPKGLAYVEYENESQASQAV 157
Query: 216 SALQGYRMDEDD--------PDSKF-LRLQFSRNPG----PRSVFGARGR 252
+ G + E+ P KF + + + PG PR ++GARG+
Sbjct: 158 LKMDGMTVKENIIKVAISNPPQRKFPEKPEARKAPGGPLVPRQIYGARGK 207
>gi|194214206|ref|XP_001916628.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Equus caballus]
Length = 962
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 804 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTN----RAGKPKGLAYVEYENESQASQAV 859
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + R PG PR ++GARG+
Sbjct: 860 LKMDGMTIKENVIKVAISNPPQRKVPEKPEARRAPGGPMVPRQMYGARGK 909
>gi|380482693|emb|CCF41081.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 519
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 338 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVSFATK 390
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G+ + +RL FS+NP
Sbjct: 391 ALHELYGHPLHNSVKGG--IRLSFSKNP 416
>gi|198455332|ref|XP_001359948.2| GA16117 [Drosophila pseudoobscura pseudoobscura]
gi|198133199|gb|EAL29100.2| GA16117 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 528 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 585
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 586 KQDLQQGVRFDPDMPQT--IRLEFAKS 610
>gi|449679798|ref|XP_002163097.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Hydra
magnipapillata]
Length = 219
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 133 LPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKL 192
+P + PGH + +P + L++ LP ++T+ +A +F+ F GYKEVRLV
Sbjct: 124 VPIIPQSMPGHMQMQMPEIPNQILFLSELPDETTEIMLAMLFQQFDGYKEVRLVPGRHD- 182
Query: 193 RGGDPLILCFVDFENPACAATALSALQGYRM 223
+ FV+FE A A L G+++
Sbjct: 183 -------IAFVEFEEAEKARIAKDTLNGFKI 206
>gi|378730449|gb|EHY56908.1| hypothetical protein HMPREF1120_04972 [Exophiala dermatitidis
NIH/UT8656]
Length = 501
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ IF GYK + K + +CFV+FE+ + A
Sbjct: 312 NTLYVGNLPMDTSEDELKAIFSKQRGYKRLCFRTKHNG-------PMCFVEFEDISFATK 364
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G ++ +RL FS+NP
Sbjct: 365 ALNELYGAQLHNSVKGG--IRLSFSKNP 390
>gi|328789046|ref|XP_392443.4| PREDICTED: protein couch potato-like [Apis mellifera]
gi|350408751|ref|XP_003488500.1| PREDICTED: protein couch potato-like [Bombus impatiens]
Length = 326
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A
Sbjct: 20 DEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAG 77
Query: 211 AATALSAL-QGYRMDEDDPDSKFLRLQFSRN 240
A A L QG R D D P + +RL+F+++
Sbjct: 78 AEAAKQDLQQGVRFDPDMPQT--IRLEFAKS 106
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
STL+V L ++ E+ IF F G+ +R+ K GG P+ FV++++ AA
Sbjct: 226 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 278
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRN 240
A++ LQG + D + +R++++++
Sbjct: 279 AMATLQGSFLLSSDRGA--IRIEYAKS 303
>gi|355717861|gb|AES06077.1| squamous cell carcinoma antigen recognized by T cells 3 [Mustela
putorius furo]
Length = 958
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 799 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTN----RAGKPKGLAYVEYENESQASQAV 854
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + + PG PR ++GARG+
Sbjct: 855 LKMDGMTIKENVIKVAISNPPQRKVPEKPEARKAPGGAMVPRQIYGARGK 904
>gi|358332433|dbj|GAA51094.1| protein couch potato, partial [Clonorchis sinensis]
Length = 413
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
T++V GLP D+ RE+ +FR F GY+ L K + G + FV F++ A A
Sbjct: 83 TIFVSGLPLDAKPRELYLLFRGFKGYQSSTL--KPAGKNGKPTAPVGFVTFDSREQAEDA 140
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSR 239
+ LQG + D + ++ +RL+F+R
Sbjct: 141 MRKLQGVKFDPE--GNQLMRLEFAR 163
>gi|301771702|ref|XP_002921271.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3-like [Ailuropoda melanoleuca]
Length = 964
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 804 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTN----RAGKPKGLAYVEYENESQASQAV 859
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + + PG PR ++GARG+
Sbjct: 860 LKMDGMTIKENVIKVAISNPPQRKVPEKPEARKAPGGAMVPRQIYGARGK 909
>gi|335301350|ref|XP_001926720.3| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Sus scrofa]
Length = 959
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP T+ E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 799 LFISGLPFSCTREELEEICKAHGTVKDIRLVTN----RAGKPKGLAYVEYENESQASQAV 854
Query: 216 SALQGYRMDEDD--------PDSKF-LRLQFSRNPG----PRSVFGARGR 252
+ G + E+ P KF + + + PG PR ++GARG+
Sbjct: 855 LKMDGMTVKENIIKVAISNPPQRKFPEKPEARKAPGGPLVPRQIYGARGK 904
>gi|347966393|ref|XP_003435906.1| AGAP013145-PA [Anopheles gambiae str. PEST]
gi|333470078|gb|EGK97506.1| AGAP013145-PA [Anopheles gambiae str. PEST]
Length = 411
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 249 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFNTRAGAEAA 306
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 307 KQDLQQGVRFDPDMPQT--IRLEFAKS 331
>gi|380018457|ref|XP_003693144.1| PREDICTED: protein couch potato-like [Apis florea]
Length = 331
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A
Sbjct: 20 DEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAG 77
Query: 211 AATALSAL-QGYRMDEDDPDSKFLRLQFSRN 240
A A L QG R D D P + +RL+F+++
Sbjct: 78 AEAAKQDLQQGVRFDPDMPQT--IRLEFAKS 106
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
STL+V L ++ E+ IF F G+ +R+ K GG P+ FV++++ AA
Sbjct: 226 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 278
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRN 240
A++ LQG + D + +R++++++
Sbjct: 279 AMATLQGSFLLSSDRGA--IRIEYAKS 303
>gi|407922123|gb|EKG15250.1| hypothetical protein MPH_07584 [Macrophomina phaseolina MS6]
Length = 589
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK RL + +K G +CFV+FE+ + A
Sbjct: 400 NTLYVGNLPIDTSEDELKAMFSKQRGYK--RLCFR-TKANG----PMCFVEFEDVSFATK 452
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G+ + +RL FS+NP
Sbjct: 453 ALNELYGHPLHNSVKGG--IRLSFSKNP 478
>gi|452984744|gb|EME84501.1| hypothetical protein MYCFIDRAFT_182368 [Pseudocercospora fijiensis
CIRAD86]
Length = 479
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 286 NTLYVGNLPIDTSEDELKSLFSKQRGYKRLCFRTKQNG-------PMCFVEFEDISFATK 338
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G+ + +RL FS+NP
Sbjct: 339 ALHELYGHPLHNSVKGG--IRLSFSKNP 364
>gi|452823467|gb|EME30477.1| U2 small nuclear ribonucleoprotein B'' [Galdieria sulphuraria]
Length = 250
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
L++ G+P D + +++ +F F GYKE RL + + + FV+FE A A
Sbjct: 177 VLFIAGIPQDCSLQQLESLFVQFPGYKETRLAAGQER--------VAFVEFETEDQATVA 228
Query: 215 LSALQGYRMDE 225
L +QG+R+ E
Sbjct: 229 LQGMQGFRISE 239
>gi|442619723|ref|NP_001014631.3| couch potato, isoform T [Drosophila melanogaster]
gi|442619727|ref|NP_001163640.2| couch potato, isoform V [Drosophila melanogaster]
gi|440217576|gb|AAX52961.3| couch potato, isoform T [Drosophila melanogaster]
gi|440217578|gb|ACZ94936.2| couch potato, isoform V [Drosophila melanogaster]
Length = 607
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 500
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 501 KQDLQQGVRFDPDMPQT--IRLEFAKS 525
>gi|170052648|ref|XP_001862318.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873473|gb|EDS36856.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 175
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
P PP TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F
Sbjct: 4 PFPPQVR-TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFS 60
Query: 207 NPACAATALSAL-QGYRMDEDDPDSKFLRLQFSRN 240
+ A A L QG R D D P + +RL+F+++
Sbjct: 61 TRSGAEAAKQDLQQGVRFDPDMPQT--IRLEFAKS 93
>gi|347966391|ref|XP_003435905.1| AGAP013145-PB [Anopheles gambiae str. PEST]
gi|333470079|gb|EGK97507.1| AGAP013145-PB [Anopheles gambiae str. PEST]
Length = 515
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 249 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFNTRAGAEAA 306
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 307 KQDLQQGVRFDPDMPQT--IRLEFAKS 331
>gi|452843907|gb|EME45842.1| hypothetical protein DOTSEDRAFT_71515 [Dothistroma septosporum
NZE10]
Length = 623
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GY+ + K++ +CFV+FE+ + A
Sbjct: 386 NTLYVGNLPVDTSEDELKSLFMKQRGYRRLCFRTKQNG-------PMCFVEFEDISFATK 438
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G+ + +RL FS+NP
Sbjct: 439 ALNELYGHPLHNSVKGG--IRLSFSKNP 464
>gi|442619719|ref|NP_732282.6| couch potato, isoform R [Drosophila melanogaster]
gi|440217574|gb|AAF55483.7| couch potato, isoform R [Drosophila melanogaster]
Length = 749
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 500
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 501 KQDLQQGVRFDPDMPQT--IRLEFAKS 525
>gi|347966395|ref|XP_003435907.1| AGAP013145-PC [Anopheles gambiae str. PEST]
gi|333470080|gb|EGK97508.1| AGAP013145-PC [Anopheles gambiae str. PEST]
Length = 243
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 81 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFNTRAGAEAA 138
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 139 KQDLQQGVRFDPDMPQT--IRLEFAKS 163
>gi|302420163|ref|XP_003007912.1| RNA binding protein [Verticillium albo-atrum VaMs.102]
gi|261353563|gb|EEY15991.1| RNA binding protein [Verticillium albo-atrum VaMs.102]
Length = 450
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ A
Sbjct: 266 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVTFATK 318
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G + +RL FS+NP
Sbjct: 319 ALNELYGQPLHNSVKGG--IRLSFSKNP 344
>gi|258570691|ref|XP_002544149.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904419|gb|EEP78820.1| predicted protein [Uncinocarpus reesii 1704]
Length = 603
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK R++ ++ K G +CFV+F++ + A
Sbjct: 392 NTLYVGNLPPDTSEDELKALFSKQRGYK--RMIFRQ-KPNG----PICFVEFDDISWATK 444
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+L L GY + +RL FS+NP
Sbjct: 445 SLKELYGYELSNSIKGG--IRLSFSKNP 470
>gi|427782383|gb|JAA56643.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 326
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + + P + FV F + A A A
Sbjct: 29 TLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTQKNGKTSSP--VGFVTFSSRAGAEAA 86
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 87 KQELQQGVRFDPDLPQT--IRLEFAKS 111
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
STL+V L +++E+ +F F G+ +R+ K GG P+ FV++++ A
Sbjct: 241 STLFVANLGQFVSEQELKDLFGSFPGFCRLRMHNK-----GGAPV--AFVEYQDVRLATH 293
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRN 240
A++ALQG + D +R++F++N
Sbjct: 294 AMNALQGCVLFSSDRGG--VRIEFAKN 318
>gi|391342685|ref|XP_003745646.1| PREDICTED: uncharacterized protein LOC100903800 [Metaseiulus
occidentalis]
Length = 319
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 28 TLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTSKNGKTSSP--VGFVTFSTRAGAEAA 85
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 86 KQELQQGVRFDPDLPQT--IRLEFAKS 110
>gi|384498171|gb|EIE88662.1| hypothetical protein RO3G_13373 [Rhizopus delemar RA 99-880]
Length = 464
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+ + E+ +F GYK RL + + P +CFV+FE+ AA
Sbjct: 380 NTLYVGNLPPDANEEELKSMFSKCAGYK--RLSFRN---KSNGP--MCFVEFEDAIFAAQ 432
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G + +RL FS+NP
Sbjct: 433 ALQDLHGNPLSNSVKGG--IRLSFSKNP 458
>gi|449279242|gb|EMC86877.1| Squamous cell carcinoma antigen recognized by T-cells 3, partial
[Columba livia]
Length = 875
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ + + K++RLV R G P L +V+FEN A A+ A+
Sbjct: 715 LFISGLPFSCTKEELEEVCKAHGNVKDIRLVTN----RAGKPKGLAYVEFENEAQASQAV 770
Query: 216 SALQGYRMDE-------DDPDSKFL--RLQFSRNPG---PRSVFGARGR 252
+ G + E +P + L + + R P PR V+GARG+
Sbjct: 771 LKMDGLTVKEHVIKVAISNPPLRKLPDKPEAGRAPQFAVPRQVYGARGK 819
>gi|225680707|gb|EEH18991.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb03]
Length = 805
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 135 FDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRG 194
F A+ +ET P +STL+V L +T +A +F+P G+ R+ K + R
Sbjct: 562 FKASEADENET----PLETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRP 617
Query: 195 GDPLIL--CFVDFENPACAATALSALQGYRMDEDD 227
G+ L + FV+F A A AL+ + GY++D+ +
Sbjct: 618 GETLSMGFGFVEFRTSAQARAALATMNGYKLDQHE 652
>gi|383858263|ref|XP_003704621.1| PREDICTED: protein couch potato-like [Megachile rotundata]
Length = 334
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 17 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 74
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 75 KQDLQQGVRFDPDMPQT--IRLEFAKS 99
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
STL+V L ++ E+ IF F G+ +R+ K GG P+ FV++++ AA
Sbjct: 219 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 271
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRN 240
A++ LQG + D + +R++++++
Sbjct: 272 AMATLQGSFLLSSDRGA--IRIEYAKS 296
>gi|25012435|gb|AAN71324.1| RE20544p [Drosophila melanogaster]
Length = 194
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 30 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 87
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 88 KQDLQQGVRFDPDMPQT--IRLEFAKS 112
>gi|361127106|gb|EHK99086.1| putative Cell wall integrity protein scw1 [Glarea lozoyensis 74030]
Length = 446
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 251 NTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVSFATK 303
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G+ + +RL FS+NP
Sbjct: 304 ALHELYGHPLHNSIKGG--IRLSFSKNP 329
>gi|195107387|ref|XP_001998295.1| GI23706 [Drosophila mojavensis]
gi|193914889|gb|EDW13756.1| GI23706 [Drosophila mojavensis]
Length = 609
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 445 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 502
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 503 KQDLQQGVRFDPDMPQT--IRLEFAKS 527
>gi|302832471|ref|XP_002947800.1| hypothetical protein VOLCADRAFT_103581 [Volvox carteri f.
nagariensis]
gi|300267148|gb|EFJ51333.1| hypothetical protein VOLCADRAFT_103581 [Volvox carteri f.
nagariensis]
Length = 224
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+ L+V+ LP +S + + +F+ F G++EVR+V + R G + FV+FEN +
Sbjct: 149 NKILFVQNLPENSNEAMLGMLFQQFPGFREVRMV----EARPG----IAFVEFENDMQST 200
Query: 213 TALSALQGYRM 223
TA+ LQG+++
Sbjct: 201 TAMQGLQGFKI 211
>gi|226292390|gb|EEH47810.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 820
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 135 FDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRG 194
F A+ +ET P +STL+V L +T +A +F+P G+ R+ K + R
Sbjct: 577 FKASEADENET----PLETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRP 632
Query: 195 GDPLIL--CFVDFENPACAATALSALQGYRMDEDD 227
G+ L + FV+F A A AL+ + GY++D+ +
Sbjct: 633 GETLSMGFGFVEFRTSAQARAALATMNGYKLDQHE 667
>gi|195444819|ref|XP_002070044.1| GK11234 [Drosophila willistoni]
gi|194166129|gb|EDW81030.1| GK11234 [Drosophila willistoni]
Length = 571
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 30 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 87
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 88 KQDLQQGVRFDPDMPQT--IRLEFAKS 112
>gi|417405453|gb|JAA49437.1| Putative rna-binding protein sart3 rrm superfamily [Desmodus
rotundus]
Length = 963
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 27/115 (23%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDIRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDEDDPDSKFLRLQFS--------------RNPG----PRSVFGARGR 252
+ G + E+ +++ S R PG PR ++GARG+
Sbjct: 859 MKMDGMTIKEN-----VIKVAISNPPQRKGPEKPEARRGPGGPGVPRQMYGARGK 908
>gi|346977589|gb|EGY21041.1| RNA binding protein [Verticillium dahliae VdLs.17]
Length = 508
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ A
Sbjct: 324 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVTFATK 376
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G + +RL FS+NP
Sbjct: 377 ALNELYGQPLHNSVKGG--IRLSFSKNP 402
>gi|189234175|ref|XP_968800.2| PREDICTED: similar to RE20544p [Tribolium castaneum]
Length = 187
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 27 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFNTRAGAEAA 84
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 85 KQDLQQGVRFDPDMPQT--IRLEFAKS 109
>gi|344295187|ref|XP_003419295.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Loxodonta africana]
Length = 968
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 808 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 863
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + + PG PR ++GARG+
Sbjct: 864 MKMDGMTIKENVIKVAISNPPQRKVPEKPEARKAPGGPMVPRQIYGARGK 913
>gi|119183856|ref|XP_001242909.1| hypothetical protein CIMG_06805 [Coccidioides immitis RS]
gi|392865813|gb|EAS31646.2| RNA binding protein [Coccidioides immitis RS]
Length = 615
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK R++ ++ K G +CFV+F++ + A
Sbjct: 403 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ-KPNG----PICFVEFDDISWATK 455
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+L L GY + +RL FS+NP
Sbjct: 456 SLKELYGYELSNSIKGG--IRLSFSKNP 481
>gi|406859405|gb|EKD12471.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 842
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 384 NTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVSFATK 436
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G+ + +RL FS+NP
Sbjct: 437 ALHELYGHPLHNSVKGG--IRLSFSKNP 462
>gi|398405022|ref|XP_003853977.1| hypothetical protein MYCGRDRAFT_38046 [Zymoseptoria tritici IPO323]
gi|339473860|gb|EGP88953.1| hypothetical protein MYCGRDRAFT_38046 [Zymoseptoria tritici IPO323]
Length = 499
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 306 NTLYVGNLPIDTSEDELKSLFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 358
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
L L G+ + +RL FS+NP
Sbjct: 359 TLHELYGHPLHNSVKGG--IRLSFSKNP 384
>gi|320031854|gb|EFW13811.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 615
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK R++ ++ K G +CFV+F++ + A
Sbjct: 403 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ-KPNG----PICFVEFDDISWATK 455
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+L L GY + +RL FS+NP
Sbjct: 456 SLKELYGYELSNSIKGG--IRLSFSKNP 481
>gi|425772895|gb|EKV11275.1| hypothetical protein PDIG_51110 [Penicillium digitatum PHI26]
gi|425782122|gb|EKV20050.1| hypothetical protein PDIP_20330 [Penicillium digitatum Pd1]
Length = 835
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFENPA 209
A++TL+V+ L +T + +FR G+ R+ K R G L + F DF+ A
Sbjct: 606 ATTTLFVKNLNFSTTNEKFLEVFRSLDGFITGRIKTKPDPKRPGQTLSMGFAFADFKTKA 665
Query: 210 CAATALSALQGYRMDE 225
A ALSA+ GY++D+
Sbjct: 666 QAQAALSAMNGYKLDQ 681
>gi|440634774|gb|ELR04693.1| hypothetical protein GMDG_01551 [Geomyces destructans 20631-21]
Length = 577
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 380 NTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVSFATK 432
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G+ + +RL FS+NP
Sbjct: 433 ALHELYGHPLHNSVKGG--IRLSFSKNP 458
>gi|322701438|gb|EFY93188.1| hypothetical protein MAC_00971 [Metarhizium acridum CQMa 102]
Length = 567
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 134 PFDAAARPGHETLPLPP----DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKE 189
P + + P H P+ P +TLYV LP D+++ E+ +F GYK + K+
Sbjct: 353 PVNGHSFPRHNFPPVNPADQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQ 412
Query: 190 SKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+ +CFV+FE+ + A AL L G + +RL FS+NP
Sbjct: 413 NG-------PMCFVEFEDVSFATKALHELYGQPLHNSVKGG--IRLSFSKNP 455
>gi|303320063|ref|XP_003070031.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109717|gb|EER27886.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 615
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK R++ ++ K G +CFV+F++ + A
Sbjct: 403 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ-KPNG----PICFVEFDDISWATK 455
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+L L GY + +RL FS+NP
Sbjct: 456 SLKELYGYELSNS--IKGGIRLSFSKNP 481
>gi|307110924|gb|EFN59159.1| hypothetical protein CHLNCDRAFT_50008 [Chlorella variabilis]
Length = 236
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+ L+VE LP + + V +F+ F G+KEVR+V + + FV++ + A
Sbjct: 160 NHILFVENLPGTANEAMVGMLFQQFTGFKEVRMVPAKPG--------IAFVEYSDEGQAG 211
Query: 213 TALSALQGYRMDEDDP 228
A+ LQG+++ D P
Sbjct: 212 VAMQGLQGFKLATDKP 227
>gi|440893379|gb|ELR46176.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Bos
grunniens mutus]
Length = 958
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V GLP TK E+ I + K++RLV R G P L +V++EN A+ A+
Sbjct: 804 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTN----RAGKPKGLAYVEYENELQASQAV 859
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + + PG PR V+GARG+
Sbjct: 860 LKMDGMTIRENVIKVAISNPPQRKVPEKPEARKAPGSALLPRQVYGARGK 909
>gi|328702215|ref|XP_001952194.2| PREDICTED: protein couch potato-like [Acyrthosiphon pisum]
Length = 295
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F+ A A A
Sbjct: 58 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFQTRAGAEAA 115
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 116 KQDLQQGVRFDPDMPQT--IRLEFAKS 140
>gi|194900318|ref|XP_001979704.1| GG22582 [Drosophila erecta]
gi|190651407|gb|EDV48662.1| GG22582 [Drosophila erecta]
Length = 745
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 65 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 122
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 123 KQDLQQGVRFDPDMPQT--IRLEFAKS 147
>gi|402075260|gb|EJT70731.1| RNA binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 620
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ F GYK + K++ +CFV+FE+ + A
Sbjct: 431 NTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVSFATK 483
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G+ + +RL FS+NP
Sbjct: 484 ALHDLYGHMLHNSVKGG--IRLSFSKNP 509
>gi|328697641|ref|XP_003240396.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 2 [Acyrthosiphon pisum]
Length = 854
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 128 SIDDQLPFDAAARPGHET----LPLPPD-ASSTLYVEGLPADSTKREVAHIFRPFVGYKE 182
S++++ F + +P ++ L P + + L+V+GLP TK ++ +IF+P+ K+
Sbjct: 675 SVNNRPMFVSKCQPDKQSRSSGLRFPTELEKNKLFVKGLPFTCTKTDIENIFKPYGALKD 734
Query: 183 VRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPG 242
VR+V R G L +VDFE+ AA AL + D + + + SR P
Sbjct: 735 VRVV----TFRNGHSKGLAYVDFEDEVSAAQAL-----LKTDNTIIKDRTISVALSRPPE 785
Query: 243 PR 244
R
Sbjct: 786 RR 787
>gi|322709618|gb|EFZ01194.1| RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 564
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 134 PFDAAARPGHETLPLPP----DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKE 189
P + + P H P+ P +TLYV LP D+++ E+ +F GYK + K+
Sbjct: 351 PVNGHSFPRHNFPPVNPADQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQ 410
Query: 190 SKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+ +CFV+FE+ + A AL L G + +RL FS+NP
Sbjct: 411 NG-------PMCFVEFEDVSFATKALHELYGQPLHNSVKGG--IRLSFSKNP 453
>gi|449469074|ref|XP_004152246.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Cucumis sativus]
Length = 248
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 24/119 (20%)
Query: 106 DPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADS 165
+P+ G +GAT Q+P+ P PP+ S L+V+ LP ++
Sbjct: 142 NPAFAGAYGATA------------HSQVPYSGGVMVPEA--PAPPN--SILFVQNLPHET 185
Query: 166 TKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMD 224
T + +F + G+KEVR+V E+K P I FV++ + + A+ ALQG++M+
Sbjct: 186 TPMMLQMLFCQYPGFKEVRMV--EAK-----PGI-AFVEYSDEVQSTVAMQALQGFKMN 236
>gi|328697639|ref|XP_001946245.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 1 [Acyrthosiphon pisum]
Length = 854
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 128 SIDDQLPFDAAARPGHET----LPLPPD-ASSTLYVEGLPADSTKREVAHIFRPFVGYKE 182
S++++ F + +P ++ L P + + L+V+GLP TK ++ +IF+P+ K+
Sbjct: 675 SVNNRPMFVSKCQPDKQSRSSGLRFPTELEKNKLFVKGLPFTCTKTDIENIFKPYGALKD 734
Query: 183 VRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPG 242
VR+V R G L +VDFE+ AA AL + D + + + SR P
Sbjct: 735 VRVV----TFRNGHSKGLAYVDFEDEVSAAQAL-----LKTDNTIIKDRTISVALSRPPE 785
Query: 243 PR 244
R
Sbjct: 786 RR 787
>gi|449484269|ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 242
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 24/119 (20%)
Query: 106 DPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADS 165
+P+ G +GAT Q+P+ P PP+ S L+V+ LP ++
Sbjct: 136 NPAFAGAYGATA------------HSQVPYSGGVMVPEA--PAPPN--SILFVQNLPHET 179
Query: 166 TKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMD 224
T + +F + G+KEVR+V E+K P I FV++ + + A+ ALQG++M+
Sbjct: 180 TPMMLQMLFCQYPGFKEVRMV--EAK-----PGI-AFVEYSDEVQSTVAMQALQGFKMN 230
>gi|410977029|ref|XP_003994915.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Felis catus]
Length = 928
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V GLP TK E+ I + K++RLV R G P L +V++E+ + A+ A+
Sbjct: 768 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTN----RAGKPKGLAYVEYESESQASQAV 823
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + R PG PR ++GARG+
Sbjct: 824 LKMDGMTVKENVIKVAISNPPQRKVPEKPEARRAPGGALVPRQIYGARGK 873
>gi|295673056|ref|XP_002797074.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226282446|gb|EEH38012.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 806
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 135 FDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRG 194
F A+ +ETL +STL+V L +T +A +F+P G+ R+ K + R
Sbjct: 563 FKASEADENETLL----ETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRP 618
Query: 195 GDPLIL--CFVDFENPACAATALSALQGYRMDEDD 227
G+ L + FV+F A A AL+ + GY++D+ +
Sbjct: 619 GETLSMGFGFVEFRTSAQARAALATMNGYKLDQHE 653
>gi|449297722|gb|EMC93739.1| hypothetical protein BAUCODRAFT_48247, partial [Baudoinia
compniacensis UAMH 10762]
Length = 444
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP ++++ E+ IF GYK + K++ +CFV+FE+ A
Sbjct: 306 NTLYVGNLPINTSEDELKAIFSRQRGYKRLCFRTKQNG-------PMCFVEFEDVGFATR 358
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ L G+ + +RL FS+NP
Sbjct: 359 ALNDLYGFVLSNSVKGG--IRLSFSKNP 384
>gi|328352765|emb|CCA39163.1| Protein WHI4 [Komagataella pastoris CBS 7435]
Length = 496
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI--LCFVDFENPACA 211
+TLYV LP D+T+ E+ +F P G++ + K S +CFV+F + A
Sbjct: 382 NTLYVGNLPGDATEAELRSLFTPVKGFRRLSFKNKTSISGSSGGGGGPMCFVEFNSITEA 441
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A AL+ L G + +RL FS+NP
Sbjct: 442 AEALANLYGTSLRCSSKGG--IRLSFSKNP 469
>gi|254572223|ref|XP_002493221.1| RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci
[Komagataella pastoris GS115]
gi|238033019|emb|CAY71042.1| RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci
[Komagataella pastoris GS115]
Length = 497
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI--LCFVDFENPACA 211
+TLYV LP D+T+ E+ +F P G++ + K S +CFV+F + A
Sbjct: 383 NTLYVGNLPGDATEAELRSLFTPVKGFRRLSFKNKTSISGSSGGGGGPMCFVEFNSITEA 442
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A AL+ L G + +RL FS+NP
Sbjct: 443 AEALANLYGTSLRCSSKGG--IRLSFSKNP 470
>gi|357611617|gb|EHJ67566.1| putative Protein couch potato [Danaus plexippus]
Length = 324
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F A A A
Sbjct: 18 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 75
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 76 KQDLQQGVRFDPDMPQT--IRLEFAKS 100
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A PGH+ P STL+V L ++ E+ IF G+ +RL + GG+
Sbjct: 209 AHPGHQAHPAHTAPCSTLFVANLGQFVSEHELKEIFSSCSGFNRLRL------MTGGNGP 262
Query: 199 ILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
+ FV+F AA A ++LQG + + L+L+++R+ P +
Sbjct: 263 V-AFVEFATTRDAAAARASLQGALLLSSE---SALQLEYARHKSPHT 305
>gi|108707670|gb|ABF95465.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 231
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%), Gaps = 10/82 (12%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
P PP+ + L+++ LPA++T + +F+ + G++EVR++ E+K P I FV++E
Sbjct: 152 PAPPN--NILFIQNLPAETTSMMLQILFQQYPGFREVRMI--EAK-----PGI-AFVEYE 201
Query: 207 NPACAATALSALQGYRMDEDDP 228
+ + + A+ ALQG+++ +P
Sbjct: 202 DDSQSMVAMQALQGFKITPYNP 223
>gi|73994825|ref|XP_864427.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Canis lupus familiaris]
Length = 964
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 804 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTN----RAGKPKGLAYVEYENESQASQAV 859
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + + PG PR ++GARG+
Sbjct: 860 LKMDGMTIKENVIKVAISNPPQRKVPEKPETKKAPGGGMVPRQIYGARGK 909
>gi|260943586|ref|XP_002616091.1| hypothetical protein CLUG_03332 [Clavispora lusitaniae ATCC 42720]
gi|238849740|gb|EEQ39204.1| hypothetical protein CLUG_03332 [Clavispora lusitaniae ATCC 42720]
Length = 589
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI------LCFVDFEN 207
+TLYV LP D+T+ E+ +F P G++ + K G +CFV+FE+
Sbjct: 458 NTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSSSGSGSSGHNHGPMCFVEFED 517
Query: 208 PACAATALSALQGYRMDEDDPDSKF--LRLQFSRNPGPRSVFGARG 251
A A AL+ L G + + + +RL FS+NP G RG
Sbjct: 518 VAHATIALAELYGRALPRPNGSNGKGGIRLSFSKNP-----LGVRG 558
>gi|115452491|ref|NP_001049846.1| Os03g0298800 [Oryza sativa Japonica Group]
gi|122247158|sp|Q10MR0.1|RU2B_ORYSJ RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|108707669|gb|ABF95464.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548317|dbj|BAF11760.1| Os03g0298800 [Oryza sativa Japonica Group]
gi|215737098|dbj|BAG96027.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624757|gb|EEE58889.1| hypothetical protein OsJ_10509 [Oryza sativa Japonica Group]
Length = 232
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%), Gaps = 10/82 (12%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
P PP+ + L+++ LPA++T + +F+ + G++EVR++ E+K P I FV++E
Sbjct: 153 PAPPN--NILFIQNLPAETTSMMLQILFQQYPGFREVRMI--EAK-----PGI-AFVEYE 202
Query: 207 NPACAATALSALQGYRMDEDDP 228
+ + + A+ ALQG+++ +P
Sbjct: 203 DDSQSMVAMQALQGFKITPYNP 224
>gi|384950746|sp|B8AM21.1|RU2B_ORYSI RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|218192634|gb|EEC75061.1| hypothetical protein OsI_11177 [Oryza sativa Indica Group]
Length = 232
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%), Gaps = 10/82 (12%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
P PP+ + L+++ LPA++T + +F+ + G++EVR++ E+K P I FV++E
Sbjct: 153 PAPPN--NILFIQNLPAETTSMMLQILFQQYPGFREVRMI--EAK-----PGI-AFVEYE 202
Query: 207 NPACAATALSALQGYRMDEDDP 228
+ + + A+ ALQG+++ +P
Sbjct: 203 DDSQSMVAMQALQGFKITPYNP 224
>gi|410977027|ref|XP_003994914.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Felis catus]
Length = 964
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V GLP TK E+ I + K++RLV R G P L +V++E+ + A+ A+
Sbjct: 804 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTN----RAGKPKGLAYVEYESESQASQAV 859
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + R PG PR ++GARG+
Sbjct: 860 LKMDGMTVKENVIKVAISNPPQRKVPEKPEARRAPGGALVPRQIYGARGK 909
>gi|357112644|ref|XP_003558118.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like
[Brachypodium distachyon]
Length = 233
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 10/82 (12%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
P PP+ L+++ LP +T + +FR + G+ EVR++ E+K P I FV+FE
Sbjct: 154 PAPPN--KILFIQNLPDQTTSMMLQLLFRQYPGFWEVRMI--EAK-----PGI-AFVEFE 203
Query: 207 NPACAATALSALQGYRMDEDDP 228
+ + + A+ ALQG+++ ++P
Sbjct: 204 DESQSMVAMQALQGFKISPENP 225
>gi|90077244|dbj|BAE88302.1| unnamed protein product [Macaca fascicularis]
Length = 197
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 12/126 (9%)
Query: 102 LPVSDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGL 161
P D + ++ T D++ ++ + ++ + ET P + L++ L
Sbjct: 75 FPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQET----PAPNHILFLTNL 130
Query: 162 PADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGY 221
P ++ + ++ +F F G+KEVRLV + FV+F+N A A ALQG+
Sbjct: 131 PEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNEVQAGAARDALQGF 182
Query: 222 RMDEDD 227
++ +++
Sbjct: 183 KITQNN 188
>gi|403373310|gb|EJY86574.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 303
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFV--GYKEVRLVIKESKLRGGDPLILCFVDFENP 208
++++ L++EGL + + IF V G+KEVR + ++ + FV++E+
Sbjct: 221 ESNNLLFIEGLSKRTPTSILNEIFSQAVIGGFKEVRHIAEKE---------VAFVEYEDD 271
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A+ A++ALQGY++ E + ++ L + F++
Sbjct: 272 HVASIAMNALQGYQIKESNGETTVLSISFAK 302
>gi|242036017|ref|XP_002465403.1| hypothetical protein SORBIDRAFT_01g038060 [Sorghum bicolor]
gi|241919257|gb|EER92401.1| hypothetical protein SORBIDRAFT_01g038060 [Sorghum bicolor]
Length = 233
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 51/82 (62%), Gaps = 10/82 (12%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
P PP+ + L+++ LP +T + +F+ + G++EVR++ E+K P I FV+FE
Sbjct: 154 PAPPN--NILFIQNLPDQTTSMMLQILFQQYPGFREVRMI--EAK-----PGI-AFVEFE 203
Query: 207 NPACAATALSALQGYRMDEDDP 228
+ + + A+ ALQG+++ ++P
Sbjct: 204 DDSQSMVAMQALQGFKITPENP 225
>gi|401626491|gb|EJS44435.1| whi4p [Saccharomyces arboricola H-6]
Length = 649
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI---LCFVDFENPAC 210
+TLYV LP D+T++E+ +F G++ + K + G +CFV+FE+ +
Sbjct: 533 NTLYVGNLPPDATEQELRQLFSNQQGFRRLSFRNKMNSHGHGSGHGHGPICFVEFEDVSF 592
Query: 211 AATALSALQGYRMDEDDP---DSKFLRLQFSRNPGPRSVFGARG 251
A AL+ L G ++ P + +RL FS+NP G RG
Sbjct: 593 ATRALAELYGSQLPHPRPSLNNKGGIRLSFSKNP-----LGVRG 631
>gi|429852927|gb|ELA28038.1| RNA binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 518
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ + A
Sbjct: 338 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVSFATK 390
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G + +RL FS+NP
Sbjct: 391 ALHDLYGQPLHNSVKGG--IRLSFSKNP 416
>gi|321172607|gb|ADW77182.1| couch potato [Culex pipiens]
Length = 252
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F + A A
Sbjct: 88 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFSTRSGAEAA 145
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + +RL+F+++
Sbjct: 146 KQDLQQGVRFDPDMPQT--IRLEFAKS 170
>gi|237829859|ref|XP_002364227.1| small nuclear ribonucleoprotein U1A, putative [Toxoplasma gondii
ME49]
gi|211961891|gb|EEA97086.1| small nuclear ribonucleoprotein U1A, putative [Toxoplasma gondii
ME49]
gi|221487300|gb|EEE25532.1| small nuclear ribonucleoprotein U1A, putative [Toxoplasma gondii
GT1]
gi|221507093|gb|EEE32697.1| small nuclear ribonucleoprotein U1A, putative [Toxoplasma gondii
VEG]
Length = 385
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
P + L++E LP D+T + +F G EVR V+ + FV+++N
Sbjct: 307 FPAMPNKVLFLENLPEDATMEGLVSLFSKHAGMIEVRPVLWRR---------VAFVEYDN 357
Query: 208 PACAATALSALQGYRMD 224
AA A++ALQGY M+
Sbjct: 358 EMLAANAMNALQGYNMN 374
>gi|323338486|gb|EGA79710.1| Whi4p [Saccharomyces cerevisiae Vin13]
Length = 649
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI---LCFVDFENPAC 210
+TLYV LP D+T++E+ +F G++ + K + G+ +CFV+FE+ +
Sbjct: 533 NTLYVGNLPPDATEQELRQLFSNQQGFRRLSFRNKMNSHGHGNGHGHGPICFVEFEDVSF 592
Query: 211 AATALSALQGYRMDEDDP---DSKFLRLQFSRNPGPRSVFGARG 251
A AL+ L G ++ P + +RL FS+NP G RG
Sbjct: 593 ATRALAELYGSQLPHPRPSLNNKGGIRLSFSKNP-----LGVRG 631
>gi|6319977|ref|NP_010057.1| Whi4p [Saccharomyces cerevisiae S288c]
gi|74676444|sp|Q07655.1|WHI4_YEAST RecName: Full=Protein WHI4
gi|1431377|emb|CAA98803.1| WHI4 [Saccharomyces cerevisiae]
gi|207347167|gb|EDZ73442.1| YDL224Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270998|gb|EEU06112.1| Whi4p [Saccharomyces cerevisiae JAY291]
gi|259145798|emb|CAY79061.1| Whi4p [Saccharomyces cerevisiae EC1118]
gi|285810817|tpg|DAA11641.1| TPA: Whi4p [Saccharomyces cerevisiae S288c]
gi|323305765|gb|EGA59504.1| Whi4p [Saccharomyces cerevisiae FostersB]
gi|323349375|gb|EGA83599.1| Whi4p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355917|gb|EGA87728.1| Whi4p [Saccharomyces cerevisiae VL3]
gi|365761695|gb|EHN03332.1| Whi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392300090|gb|EIW11181.1| Whi4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 649
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI---LCFVDFENPAC 210
+TLYV LP D+T++E+ +F G++ + K + G+ +CFV+FE+ +
Sbjct: 533 NTLYVGNLPPDATEQELRQLFSNQQGFRRLSFRNKMNSHGHGNGHGHGPICFVEFEDVSF 592
Query: 211 AATALSALQGYRMDEDDP---DSKFLRLQFSRNPGPRSVFGARG 251
A AL+ L G ++ P + +RL FS+NP G RG
Sbjct: 593 ATRALAELYGSQLPHPRPSLNNKGGIRLSFSKNP-----LGVRG 631
>gi|303281170|ref|XP_003059877.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458532|gb|EEH55829.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 224
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 10/76 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L+V+GLP +T ++ +F+ F G+KEVR+V E+K P I FV+F
Sbjct: 147 PPN--EILFVQGLPEATTAAMLSMLFQQFPGFKEVRMV--EAK-----PGI-AFVEFTAE 196
Query: 209 ACAATALSALQGYRMD 224
A+ AL LQG++++
Sbjct: 197 TQASVALQGLQGFKIN 212
>gi|225437410|ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
Length = 245
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 21/123 (17%)
Query: 106 DPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADS 165
+P+ G +GA P Q+P+ A+ P PP+ + L+++ LP ++
Sbjct: 136 NPAYGGAYGAAPPL-----------SQIPYLGGAKSAVPEAPAPPN--NILFIQNLPHEA 182
Query: 166 TKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDE 225
T + F + G+KEVR+V E+K P I FV++ + + A+ LQG ++++
Sbjct: 183 TPMMLQMFFCQYPGFKEVRMV--EAK-----PGI-AFVEYGDEMQSTVAMQGLQGLKINQ 234
Query: 226 DDP 228
+P
Sbjct: 235 QNP 237
>gi|395833841|ref|XP_003789927.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Otolemur garnettii]
Length = 964
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 805 LFISGLPFSCTKEELEEICKTHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 860
Query: 216 SALQGYRMDEDD--------PDSKFLRLQFSRN-PG----PRSVFGARGR 252
+ G + E+ P K SR PG PR ++GARG+
Sbjct: 861 LKMDGMTIKENVIKVAISNPPQRKVPEKPESRKAPGGSMVPRQLYGARGK 910
>gi|151941784|gb|EDN60140.1| whiskey [Saccharomyces cerevisiae YJM789]
Length = 649
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI---LCFVDFENPAC 210
+TLYV LP D+T++E+ +F G++ + K + G+ +CFV+FE+ +
Sbjct: 533 NTLYVGNLPPDATEQELRQLFSNQQGFRRLSFRNKMNSHGHGNGHGHGPICFVEFEDVSF 592
Query: 211 AATALSALQGYRMDEDDP---DSKFLRLQFSRNPGPRSVFGARG 251
A AL+ L G ++ P + +RL FS+NP G RG
Sbjct: 593 ATRALAELYGSQLPHPRPSLNNKGGIRLSFSKNP-----LGVRG 631
>gi|351698640|gb|EHB01559.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Heterocephalus glaber]
Length = 924
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + KE+RLV R G P L +V++EN + A+ A+
Sbjct: 764 LFISGLPFSCTKEELEDICKAHGTVKELRLVTN----RAGKPKGLAYVEYENESQASQAV 819
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + + PG PR ++GARG+
Sbjct: 820 MKMDGMTIKENVIKVAISNPPQRKVPEKPEVRKAPGGPLVPRQMYGARGK 869
>gi|349576861|dbj|GAA22030.1| K7_Whi4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 649
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI---LCFVDFENPAC 210
+TLYV LP D+T++E+ +F G++ + K + G+ +CFV+FE+ +
Sbjct: 533 NTLYVGNLPPDATEQELRQLFSNQQGFRRLSFRNKMNSHGHGNGHGHGPICFVEFEDVSF 592
Query: 211 AATALSALQGYRMDEDDP---DSKFLRLQFSRNPGPRSVFGARG 251
A AL+ L G ++ P + +RL FS+NP G RG
Sbjct: 593 ATRALAELYGSQLPHPRPSLNNKGGIRLSFSKNP-----LGVRG 631
>gi|294461275|gb|ADE76200.1| unknown [Picea sitchensis]
gi|294464400|gb|ADE77712.1| unknown [Picea sitchensis]
Length = 241
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
++RP P PP+ + L+V+ LP ++T + +F + G+KEVR++ + + G
Sbjct: 153 SSRPSLPEAPAPPN--NILFVQNLPHETTSMMLQMLFCQYHGFKEVRMI----EAKPG-- 204
Query: 198 LILCFVDFENPACAATALSALQGYRMDEDDP 228
+ FV++ + + A+ ALQG+++ +P
Sbjct: 205 --IAFVEYADEMQSTVAMQALQGFKITPQNP 233
>gi|367043256|ref|XP_003652008.1| hypothetical protein THITE_2112877 [Thielavia terrestris NRRL 8126]
gi|346999270|gb|AEO65672.1| hypothetical protein THITE_2112877 [Thielavia terrestris NRRL 8126]
Length = 513
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK RL + +K G +CFV+FE+ + A
Sbjct: 332 NTLYVGNLPLDTSEEELKAMFSKQRGYK--RLCFR-TKANG----PMCFVEFEDISFATK 384
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G + +RL FS+NP
Sbjct: 385 ALKELYGQPLHNSVKGG--IRLSFSKNP 410
>gi|345562989|gb|EGX45995.1| hypothetical protein AOL_s00112g12 [Arthrobotrys oligospora ATCC
24927]
Length = 632
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
AA P + P +TLYV LPA++++ E+ +F GYK RL + +K G
Sbjct: 407 AANPADQNPPC-----NTLYVGNLPANTSEDELKALFSRQRGYK--RLCFR-TKANGP-- 456
Query: 198 LILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+CFV+FE+ A A AL+ L G + +RL FS+NP
Sbjct: 457 --MCFVEFEDVAYATRALTELYGRGLSNSVKGG--IRLSFSKNP 496
>gi|293333676|ref|NP_001169386.1| uncharacterized protein LOC100383254 [Zea mays]
gi|224029017|gb|ACN33584.1| unknown [Zea mays]
gi|414866361|tpg|DAA44918.1| TPA: hypothetical protein ZEAMMB73_448604 [Zea mays]
Length = 233
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 10/82 (12%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
P PP+ + L+++ LP +T + +F+ + G++EVR++ E+K P I FV+FE
Sbjct: 154 PAPPN--NILFIQNLPDQTTSMMLQILFQQYPGFREVRMI--EAK-----PGI-AFVEFE 203
Query: 207 NPACAATALSALQGYRMDEDDP 228
+ + A+ ALQG+++ ++P
Sbjct: 204 DDGQSMVAMQALQGFKITPENP 225
>gi|297743906|emb|CBI36876.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 21/123 (17%)
Query: 106 DPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADS 165
+P+ G +GA P Q+P+ A+ P PP+ + L+++ LP ++
Sbjct: 123 NPAYGGAYGAAPPL-----------SQIPYLGGAKSAVPEAPAPPN--NILFIQNLPHEA 169
Query: 166 TKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDE 225
T + F + G+KEVR+V E+K P I FV++ + + A+ LQG ++++
Sbjct: 170 TPMMLQMFFCQYPGFKEVRMV--EAK-----PGI-AFVEYGDEMQSTVAMQGLQGLKINQ 221
Query: 226 DDP 228
+P
Sbjct: 222 QNP 224
>gi|255731644|ref|XP_002550746.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131755|gb|EER31314.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 665
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI------LCFVDFEN 207
+TLYV LP D+T+ E+ +F P G++ + K G +CFV+FE+
Sbjct: 523 NTLYVGNLPPDATEAELRTLFSPQKGFRRLSFRTKNQSSTNGSGSTSHNHGPMCFVEFED 582
Query: 208 PACAATALSALQGYRMDEDDPDSKF--LRLQFSRNPGPRSVFGARG 251
A A AL+ L G + + + +RL FS+NP G RG
Sbjct: 583 VAHATRALAELYGSALPRPNGGNGKGGIRLSFSKNP-----LGVRG 623
>gi|401411093|ref|XP_003884994.1| putative small nuclear ribonucleoprotein U1A [Neospora caninum
Liverpool]
gi|325119413|emb|CBZ54966.1| putative small nuclear ribonucleoprotein U1A [Neospora caninum
Liverpool]
Length = 399
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
P + L++E LP D+T + +F G EVR V+ + FV++EN
Sbjct: 321 FPAMPNKVLFLENLPEDATMEGLISLFSKHAGMVEVRPVLWRR---------VAFVEYEN 371
Query: 208 PACAATALSALQGYRMD 224
AA A++ALQG++M+
Sbjct: 372 EMLAANAMNALQGHQMN 388
>gi|395513864|ref|XP_003761142.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Sarcophilus harrisii]
Length = 1030
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + +++RLV R G P L +V++EN A A+ A+
Sbjct: 871 LFISGLPFSCTKEELEDICKVHGSVRDLRLVTN----RAGKPKGLAYVEYENEAQASQAV 926
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG---PRSVFGARGR 252
+ G + E+ +P + L R + R G PR V+GARG+
Sbjct: 927 LKMDGMTIKENVIKVAISNPPQRKLPDRPEAGRAAGALVPRQVYGARGK 975
>gi|426247439|ref|XP_004017493.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3 [Ovis aries]
Length = 966
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 27/115 (23%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 806 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTN----RAGKPKGLAYVEYENESEASQAV 861
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPG------------------PRSVFGARGR 252
+ G + E+ +++ S P PR V+GARG+
Sbjct: 862 LKMDGMTIREN-----VIKVAISNPPQRKVPEKPEARRASGSALLPRQVYGARGK 911
>gi|15227729|ref|NP_180585.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
gi|75318049|sp|O22922.1|RU2B1_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|2347192|gb|AAC16931.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|27765024|gb|AAO23633.1| At2g30260 [Arabidopsis thaliana]
gi|110743428|dbj|BAE99600.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|330253269|gb|AEC08363.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
Length = 232
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 142 GHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
G ET+P ++ L+++ LP ++T + +F + G+KE+R++ P I
Sbjct: 150 GQETMP----PNNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMI-------DAKPGI-A 197
Query: 202 FVDFENPACAATALSALQGYRMDEDDP 228
FV++E+ A+ A+ LQG+++ +P
Sbjct: 198 FVEYEDDVQASIAMQPLQGFKITPQNP 224
>gi|226531516|ref|NP_001149883.1| spliceosomal protein [Zea mays]
gi|194696844|gb|ACF82506.1| unknown [Zea mays]
gi|195635261|gb|ACG37099.1| spliceosomal protein [Zea mays]
gi|195659375|gb|ACG49155.1| spliceosomal protein [Zea mays]
gi|413956009|gb|AFW88658.1| Spliceosomal protein [Zea mays]
Length = 233
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 10/82 (12%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
P PP+ + L+++ LP +T + +F+ + G++EVR++ E+K P I FV+FE
Sbjct: 154 PAPPN--NILFIQNLPDQTTSMMLQILFQQYPGFREVRMI--EAK-----PGI-AFVEFE 203
Query: 207 NPACAATALSALQGYRMDEDDP 228
+ + A+ ALQG+++ ++P
Sbjct: 204 DDGQSMVAMQALQGFKITPENP 225
>gi|448106273|ref|XP_004200705.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|448109390|ref|XP_004201336.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|359382127|emb|CCE80964.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|359382892|emb|CCE80199.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
Length = 496
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI------LCFVDFEN 207
+TLYV LP D+T++E+ +F P G++ + K S +CFV+FE+
Sbjct: 359 NTLYVGNLPPDATEQELRALFSPQKGFRRLSFRTKNSSSSNSGHSGSHNHGPMCFVEFED 418
Query: 208 PACAATALSALQGYRMDEDDPDSKF--LRLQFSRNPGPRSVFGARG 251
A A AL+ L G + + +RL FS+NP G RG
Sbjct: 419 VAHATRALAELYGRTLPRPGGSNGKGGIRLSFSKNP-----LGVRG 459
>gi|345485970|ref|XP_001605039.2| PREDICTED: protein couch potato-like [Nasonia vitripennis]
Length = 327
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F +
Sbjct: 20 DEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTNKNGKTASP--VGFVTFHTRSE 77
Query: 211 AATALSAL-QGYRMDEDDPDSKFLRLQFSRN 240
A A L QG R D D P + +RL+F+++
Sbjct: 78 AEAAKHDLQQGVRFDPDMPQT--IRLEFAKS 106
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
STL+V L ++ E+ IF F G+ +R+ K GG P+ FV++++ AA
Sbjct: 227 STLFVANLGQFVSEHELKEIFNSFPGFCRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 279
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRN 240
A++ LQG + D + +R++++++
Sbjct: 280 AMATLQGSLLVSSDRGA--IRIEYAKS 304
>gi|21593001|gb|AAM64950.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
Length = 232
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 142 GHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
G ET+P ++ L+++ LP ++T + +F + G+KE+R++ P I
Sbjct: 150 GQETMP----PNNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMI-------DAKPGI-A 197
Query: 202 FVDFENPACAATALSALQGYRMDEDDP 228
FV++E+ A+ A+ LQG+++ +P
Sbjct: 198 FVEYEDDVQASIAMQPLQGFKITPQNP 224
>gi|169771029|ref|XP_001819984.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
oryzae RIB40]
gi|83767843|dbj|BAE57982.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 825
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFENPACAA 212
TL+V+ L D+T +F+P G+ R+ K R G L + FVDF A
Sbjct: 599 TLFVKNLNFDTTNARFVEVFQPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKDQAQ 658
Query: 213 TALSALQGYRMDE 225
AL+A+ GY++D+
Sbjct: 659 AALAAMNGYKLDQ 671
>gi|115469616|ref|NP_001058407.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|52077025|dbj|BAD46058.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113596447|dbj|BAF20321.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|215692539|dbj|BAG87959.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 219
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 143 HETLPLPP-DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
H PLPP D TL++ GLP D+ REV ++FR F GY L + G
Sbjct: 57 HAAEPLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHL-----RTSGKSSQAYA 111
Query: 202 FVDFENPACAATALSALQGYRMDEDD 227
F F + A A+SA G D ++
Sbjct: 112 FAVFADQPSALAAMSATNGRIFDLEN 137
>gi|238486470|ref|XP_002374473.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
gi|220699352|gb|EED55691.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
Length = 826
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFENPACAA 212
TL+V+ L D+T +F+P G+ R+ K R G L + FVDF A
Sbjct: 600 TLFVKNLNFDTTNARFVEVFQPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKDQAQ 659
Query: 213 TALSALQGYRMDE 225
AL+A+ GY++D+
Sbjct: 660 AALAAMNGYKLDQ 672
>gi|400600735|gb|EJP68403.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 933
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ A
Sbjct: 743 NTLYVGNLPIDTSEEELKAVFCKQRGYKRLCFRTKQNG-------PMCFVEFEDITFATK 795
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G + +RL FS+NP
Sbjct: 796 ALHDLYGTPLHNSTKGG--IRLSFSKNP 821
>gi|391867843|gb|EIT77082.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 826
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFENPACAA 212
TL+V+ L D+T +F+P G+ R+ K R G L + FVDF A
Sbjct: 600 TLFVKNLNFDTTNARFVEVFQPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKDQAQ 659
Query: 213 TALSALQGYRMDE 225
AL+A+ GY++D+
Sbjct: 660 AALAAMNGYKLDQ 672
>gi|358393470|gb|EHK42871.1| hypothetical protein TRIATDRAFT_164924, partial [Trichoderma
atroviride IMI 206040]
Length = 446
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+ + E+ +F GYK RL + +K G +CFV+FE+ + A
Sbjct: 300 NTLYVGNLPVDTAEEELKAMFCKQRGYK--RLCFR-TKANGP----MCFVEFEDISLATR 352
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL+ + G + +RL FS+NP
Sbjct: 353 ALNEMYGALLHNSTKGG--IRLSFSKNP 378
>gi|351726226|ref|NP_001237887.1| uncharacterized protein LOC100499914 [Glycine max]
gi|255627621|gb|ACU14155.1| unknown [Glycine max]
Length = 232
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++ L++E LP ++T R + +F + G+KEV L+ E+K P I FVDFE+ ++
Sbjct: 157 NNILFIENLPHETTGRMLEMLFEQYPGFKEVCLI--EAK-----PGI-AFVDFEDEVQSS 208
Query: 213 TALSALQGYRMDEDDP 228
A+ AL G+++ +P
Sbjct: 209 MAMQALHGFKITPQNP 224
>gi|367021232|ref|XP_003659901.1| hypothetical protein MYCTH_2297450 [Myceliophthora thermophila ATCC
42464]
gi|347007168|gb|AEO54656.1| hypothetical protein MYCTH_2297450 [Myceliophthora thermophila ATCC
42464]
Length = 565
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ A
Sbjct: 380 NTLYVGNLPLDTSEEELKAMFSRQRGYKRLCFRTKQNG-------PMCFVEFEDVTFATK 432
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G + +RL FS+NP
Sbjct: 433 ALHELYGQPLHNSVKGG--IRLSFSKNP 458
>gi|449439191|ref|XP_004137370.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis
sativus]
gi|449520549|ref|XP_004167296.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis
sativus]
Length = 231
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 47/76 (61%), Gaps = 8/76 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++ L++E LP +++ + +F+ + G++EVR++ + + G + FV+FE+ ++
Sbjct: 156 NNILFIENLPHETSSMMLQVLFQQYPGFREVRMI----EAKPG----IAFVEFEDDVQSS 207
Query: 213 TALSALQGYRMDEDDP 228
A+ ALQG+++D P
Sbjct: 208 MAMQALQGFKIDPQHP 223
>gi|224146679|ref|XP_002326095.1| predicted protein [Populus trichocarpa]
gi|222862970|gb|EEF00477.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 12/94 (12%)
Query: 135 FDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRG 194
F + ET+P ++ L+++ LP ++T + +F+ + G++EVR++ E+K
Sbjct: 144 FRQGNQSAQETVP----PNNILFIQNLPHETTSMMLQVLFQQYPGFREVRMI--EAK--- 194
Query: 195 GDPLILCFVDFENPACAATALSALQGYRMDEDDP 228
P I FV+FE+ ++ A+ ALQG+++ +P
Sbjct: 195 --PGI-AFVEFEDDVQSSMAMQALQGFKITPQNP 225
>gi|330842469|ref|XP_003293200.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
gi|325076492|gb|EGC30273.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
Length = 233
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP+ TL+VE LP + +F F GYKEV +V ESK +G + FV+F++
Sbjct: 155 LPPN--KTLFVENLPDKCDPMMLEMLFSQFPGYKEVHMV--ESK-KG-----IAFVEFQD 204
Query: 208 PACAATALSALQGYRMDEDDP 228
+ + A+ +LQ +++ ++ P
Sbjct: 205 ESKSGLAMQSLQHFKVTQEKP 225
>gi|299472383|emb|CBN77571.1| similar to CG7697-PA [Ectocarpus siliculosus]
Length = 1264
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
++V +P +T+ ++ IF G +RLV+ G P FV++E+ A A +A+
Sbjct: 11 VFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLD---FETGKPKGFAFVEYEDAATALSAI 67
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
L GY D + + LR+ FS N S GA +R
Sbjct: 68 RNLNGY-----DCNGRLLRVNFSNN----SSLGAEQQR 96
>gi|344299824|gb|EGW30177.1| hypothetical protein SPAPADRAFT_73559 [Spathaspora passalidarum
NRRL Y-27907]
Length = 710
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI-------LCFVDFE 206
+TLYV LP D+T+ E+ +F P G++ + K GG +CFV+FE
Sbjct: 566 NTLYVGNLPPDATEAELRTLFSPQKGFRRLSFRTKTQSSTGGSSSSGSHSHGPMCFVEFE 625
Query: 207 NPACAATALSALQGYRMDE--DDPDSKFLRLQFSRNPGPRSVFGARG 251
+ A A AL+ L G + +RL FS+NP G RG
Sbjct: 626 SIAHATRALADLYGSALPRPGGGNGKGGIRLSFSKNP-----LGVRG 667
>gi|422294869|gb|EKU22169.1| U2 small nuclear ribonucleoprotein B'', partial [Nannochloropsis
gaditana CCMP526]
Length = 289
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
+ SS L + LP + T+ +A +FR F G+ E+RL + RG + F++F +
Sbjct: 213 EVSSMLMAQELPTECTEEMLAVLFRRFAGFHEIRLAGQ----RG-----IAFIEFRDEVS 263
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSR 239
A TA A G+++ + D L+L +++
Sbjct: 264 ARTAFQAYNGFKLSQTDA----LKLTYAK 288
>gi|320589895|gb|EFX02351.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 562
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
AA P + P +TLYV +P D+++ E+ +F GYK RL ++ +G P
Sbjct: 337 AANPADQNPPC-----NTLYVGNIPMDTSEEELKALFSKQRGYK--RLSVRS---KGNGP 386
Query: 198 LILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+CFV+FE+ + A L L G + +RL FS+NP
Sbjct: 387 --MCFVEFEDISFATKTLYELYGAALRGSTRGG--IRLSFSKNP 426
>gi|222636114|gb|EEE66246.1| hypothetical protein OsJ_22424 [Oryza sativa Japonica Group]
Length = 283
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 143 HETLPLPP-DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
H PLPP D TL++ GLP D+ REV ++FR F GY L + G
Sbjct: 57 HAAEPLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHL-----RTSGKSSQAYA 111
Query: 202 FVDFENPACAATALSALQGYRMDEDD 227
F F + A A+SA G D ++
Sbjct: 112 FAVFADQPSALAAMSATNGRIFDLEN 137
>gi|218198782|gb|EEC81209.1| hypothetical protein OsI_24241 [Oryza sativa Indica Group]
Length = 283
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 143 HETLPLPP-DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
H PLPP D TL++ GLP D+ REV ++FR F GY L + G
Sbjct: 57 HAAEPLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHL-----RTSGKSSQAYA 111
Query: 202 FVDFENPACAATALSALQGYRMDEDD 227
F F + A A+SA G D ++
Sbjct: 112 FAVFADQPSALAAMSATNGRIFDLEN 137
>gi|340975878|gb|EGS22993.1| putative RNA binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 586
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK RL + +K G +CFV+FE+ A
Sbjct: 409 NTLYVGNLPHDTSEEELKAMFSKQRGYK--RLCFR-TKANG----PMCFVEFEDVTFATK 461
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G + +RL FS+NP
Sbjct: 462 ALHELYGQPLHNSVKGG--IRLSFSKNP 487
>gi|169589|gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]
Length = 231
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 55/92 (59%), Gaps = 8/92 (8%)
Query: 137 AAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGD 196
AA+R G + + ++ L+++ LP ++T + +F+ + G++EVR++ E+K
Sbjct: 140 AASRQGKPSAQDVAEPNNILFIQNLPHETTSMMLEVLFKQYPGFREVRMI--EAK----- 192
Query: 197 PLILCFVDFENPACAATALSALQGYRMDEDDP 228
P I FV+F++ ++ A+ ALQG+++ +P
Sbjct: 193 PGI-AFVEFDDDVQSSVAMQALQGFKITPQNP 223
>gi|294658856|ref|XP_461195.2| DEHA2F19514p [Debaryomyces hansenii CBS767]
gi|202953439|emb|CAG89583.2| DEHA2F19514p [Debaryomyces hansenii CBS767]
Length = 529
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI------LCFVDFEN 207
+TLYV LP D+T+ E+ +F P G++ + K + +CFV+FE+
Sbjct: 393 NTLYVGNLPPDATESELRALFSPQKGFRRLSFRTKNQSSSNPNQSSNHNHGPMCFVEFED 452
Query: 208 PACAATALSALQGYRMDEDDPDSKF--LRLQFSRNPGPRSVFGARG 251
A A AL+ L G + + +RL FS+NP G RG
Sbjct: 453 VAHATRALAELYGRTLPRSGGSNGKGGIRLSFSKNP-----LGVRG 493
>gi|403218363|emb|CCK72854.1| hypothetical protein KNAG_0L02390 [Kazachstania naganishii CBS
8797]
Length = 608
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRL-------VIKESKLRGGDPLILCFVDFE 206
+TLYV LP+D+T++E+ +F G++ + V G +CFV+FE
Sbjct: 497 NTLYVGNLPSDATEQELRQLFGGQQGFRRLSFKNKNPTNVHGHGHSHGHGHGPMCFVEFE 556
Query: 207 NPACAATALSALQGYRMDEDDPDSK-FLRLQFSRNPGPRSVFGARG 251
+ + A AL+ L G ++ SK +RL FS+NP G RG
Sbjct: 557 DISFATRALADLYGSQLPRTTVYSKGGIRLSFSKNP-----LGVRG 597
>gi|150865889|ref|XP_001385283.2| Protein involved in regulation of cell size putative RNA binding
protein [Scheffersomyces stipitis CBS 6054]
gi|149387145|gb|ABN67254.2| Protein involved in regulation of cell size putative RNA binding
protein [Scheffersomyces stipitis CBS 6054]
Length = 732
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI--------LCFVDF 205
+TLYV LP D+T+ E+ +F P G++ + K +CFV+F
Sbjct: 587 NTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSGTSGSSGTSGHNHGPMCFVEF 646
Query: 206 ENPACAATALSALQGYRMDEDDPDS--KFLRLQFSRNPGPRSVFGARG 251
E+ A A AL+ L G + + + +RL FS+NP G RG
Sbjct: 647 EDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNP-----LGVRG 689
>gi|444723163|gb|ELW63824.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Tupaia
chinensis]
Length = 1050
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP T+ E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 890 LFISGLPFSCTREELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 945
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + + PG PR ++GARG+
Sbjct: 946 MKMDGMTIKENVIKVAISNPPQRKVPEKPEARKAPGGPMVPRQIYGARGK 995
>gi|115462171|ref|NP_001054685.1| Os05g0154800 [Oryza sativa Japonica Group]
gi|122169518|sp|Q0DKM4.1|RU1A_ORYSJ RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|384950745|sp|A2Y0J7.1|RU1A_ORYSI RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|113578236|dbj|BAF16599.1| Os05g0154800 [Oryza sativa Japonica Group]
gi|125550898|gb|EAY96607.1| hypothetical protein OsI_18512 [Oryza sativa Indica Group]
gi|222630249|gb|EEE62381.1| hypothetical protein OsJ_17170 [Oryza sativa Japonica Group]
Length = 253
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 11/96 (11%)
Query: 132 QLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK 191
QLPF A + + +P ++ L+V+ LP ++T + +F + G+KEVR+V E+K
Sbjct: 160 QLPFAGAQKVMMPEIIVP---NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMV--EAK 214
Query: 192 LRGGDPLILCFVDFENPACAATALSALQGYRMDEDD 227
P I FV++ + A A++ LQG+++ +D+
Sbjct: 215 -----PGI-AFVEYGDEGQATAAMNHLQGFKITKDN 244
>gi|116193039|ref|XP_001222332.1| hypothetical protein CHGG_06237 [Chaetomium globosum CBS 148.51]
gi|88182150|gb|EAQ89618.1| hypothetical protein CHGG_06237 [Chaetomium globosum CBS 148.51]
Length = 650
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+++ E+ +F GYK + K++ +CFV+FE+ A
Sbjct: 465 NTLYVGNLPLDTSEEELKALFSRQRGYKRLCFRTKQNG-------PMCFVEFEDVTFATK 517
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G + +RL FS+NP
Sbjct: 518 ALHDLYGQLLHNSVKGG--IRLSFSKNP 543
>gi|326929748|ref|XP_003211018.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Meleagris gallopavo]
Length = 899
Score = 46.2 bits (108), Expect = 0.013, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V+FEN A A+ A+
Sbjct: 739 LFISGLPFSCTKEELEDICKAHGNVKDIRLVTN----RAGKPKGLAYVEFENEAQASQAV 794
Query: 216 SALQGYRMDE-------DDPDSKFL-----RLQFSRNPGPRSVFGARGR 252
+ G + E +P + L + S+ PR ++GARG+
Sbjct: 795 LKMDGLTIKEHVIKVAISNPPLRKLPDKAEAGRASQFAVPRQIYGARGK 843
>gi|406603206|emb|CCH45243.1| U1 small nuclear ribonucleoprotein [Wickerhamomyces ciferrii]
Length = 232
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 124 LRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEV 183
L +D + + +P + LPP+ L V+GLP D T+ E+ IF + G+ EV
Sbjct: 132 LHKEELDKKKEQEPVKKPKIKIENLPPN--KILLVQGLPKDVTQDELVEIFEKYNGFVEV 189
Query: 184 RLVIKESKLRGGDPLILCFVDFEN-----PACAATA 214
RLV +RG + F+++EN PA TA
Sbjct: 190 RLV----AVRG-----VAFIEYENDKDAIPAKEGTA 216
>gi|159470585|ref|XP_001693437.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282940|gb|EDP08691.1| predicted protein [Chlamydomonas reinhardtii]
Length = 233
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+ L+V+ LP S + + +F+ F G++EVR+V + R G + FV++EN +
Sbjct: 158 NKILFVQNLPETSNEAMLGMLFQQFPGFREVRMV----EARPG----IAFVEYENEMQSG 209
Query: 213 TALSALQGYRM 223
TA+ LQG+++
Sbjct: 210 TAMQGLQGFKI 220
>gi|348584250|ref|XP_003477885.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Cavia porcellus]
Length = 961
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 802 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 857
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + + PG PR ++GARG+
Sbjct: 858 IKMDGMTIKENVIKVAISNPPQRKVPEKPEARKAPGGLMVPRQMYGARGK 907
>gi|148706068|gb|EDL38015.1| mCG22457 [Mus musculus]
Length = 275
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + + FV+F+N
Sbjct: 200 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVRHD----------IAFVEFDNE 247
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 248 VQAGAARDALQGFKITQNN 266
>gi|115894424|ref|XP_001198644.1| PREDICTED: cell wall integrity protein scw1-like
[Strongylocentrotus purpuratus]
Length = 154
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
A STL++ L +++++E+ R G+ +R+ K GG P CFV+F+N A
Sbjct: 45 ACSTLFLANLGTNTSEQELRDTLRCLPGFNRLRMHNK-----GGAPC--CFVEFQNVGFA 97
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSR 239
AL+ LQG + D LR++F++
Sbjct: 98 MQALAHLQGLMLKSSDRGG--LRVEFAK 123
>gi|307202215|gb|EFN81702.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Harpegnathos saltator]
Length = 907
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V+GLP +TK E+ IF+ + KEVRLV R G L +V++ + A AA AL
Sbjct: 752 LFVKGLPITTTKEELEEIFKIYGALKEVRLV----TYRNGHSKGLAYVEYCDEATAAKAL 807
Query: 216 SALQGYRM 223
+ G ++
Sbjct: 808 LGIDGMKI 815
>gi|225719260|gb|ACO15476.1| U1 small nuclear ribonucleoprotein A [Caligus clemensi]
Length = 217
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
AA PG PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 133 AAHPGEA----PPN--QILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVPNRHD------ 180
Query: 198 LILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN +A A +LQG+++
Sbjct: 181 --IAFVEFENEVQSAAARESLQGFKI 204
>gi|195456672|ref|XP_002075236.1| GK16926 [Drosophila willistoni]
gi|194171321|gb|EDW86222.1| GK16926 [Drosophila willistoni]
Length = 806
Score = 45.8 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++ ++V+ LP+D TK ++ IF+PF K+VRLV K +K G + ++++E P+ A
Sbjct: 628 TNKIFVKNLPSDCTKEQLTGIFKPFGTIKDVRLVFKFNKQFKG----IAYIEYELPSEAQ 683
Query: 213 TALSALQGYRM 223
A++ G+ +
Sbjct: 684 KAVTQRDGFSI 694
>gi|146183888|ref|XP_001027266.2| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila]
gi|146143436|gb|EAS07024.2| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila
SB210]
Length = 247
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
AA+P + + P TL++E LP +S + F F G+KEVRLV ++
Sbjct: 161 AAQPLVQNTIIQPH--HTLFLENLPINSNTEVIKAFFATFPGFKEVRLVPQKR------- 211
Query: 198 LILCFVDFENPACAATALSALQGYRM 223
+ FV++E+ A AL++LQ +++
Sbjct: 212 --VAFVEYEDENKATAALASLQSFKI 235
>gi|449513275|ref|XP_004175808.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Taeniopygia guttata]
Length = 99
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 136 DAAARPGHETLPLPPDA--SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLR 193
++A+ PG PD + L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 5 NSASAPGTTPQNQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRQD-- 62
Query: 194 GGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
+ FV+FEN A A ALQG+++ P S +++ +++
Sbjct: 63 ------IAFVEFENENQAGAARDALQGFKI----PPSHAMKITYAK 98
>gi|47225009|emb|CAF97424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 272
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 195 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 244
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
AA A ALQG+++ + + +++ F++
Sbjct: 245 VQAAAAREALQGFKITQTNA----MKISFAK 271
>gi|426388779|ref|XP_004060810.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Gorilla
gorilla gorilla]
Length = 229
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 13/86 (15%)
Query: 147 PLPPDASST-----LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
P PP S L++ LP ++ + ++ +F F G+KEVRLV +
Sbjct: 143 PTPPQLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IA 194
Query: 202 FVDFENPACAATALSALQGYRMDEDD 227
FV+F+N A A ALQG+++ +++
Sbjct: 195 FVEFDNEVQAGAARDALQGFKITQNN 220
>gi|291411787|ref|XP_002722167.1| PREDICTED: squamous cell carcinoma antigen recognized by T cells 3
[Oryctolagus cuniculus]
Length = 963
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 27/115 (23%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDEDDPDSKFLRLQFS--------------RNPG----PRSVFGARGR 252
+ G + E+ +++ S + PG PR ++GARG+
Sbjct: 859 MKMDGMTIREN-----VIKVAISNPPQRKAPEKPEARKAPGGPLVPRQIYGARGK 908
>gi|332855731|ref|XP_003316404.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Pan
troglodytes]
Length = 227
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 13/86 (15%)
Query: 147 PLPPDASST-----LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
P PP S L++ LP ++ + ++ +F F G+KEVRLV +
Sbjct: 141 PTPPQLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IA 192
Query: 202 FVDFENPACAATALSALQGYRMDEDD 227
FV+F+N A A ALQG+++ +++
Sbjct: 193 FVEFDNEVQAGAARDALQGFKITQNN 218
>gi|268564730|ref|XP_002639203.1| C. briggsae CBR-MEC-8 protein [Caenorhabditis briggsae]
Length = 305
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
A STL+V L A+ + ++ +F+ F G+ +RL K + FV++ + A
Sbjct: 219 ACSTLFVANLSAEVNEDQLRGVFKAFTGFTRLRLHNKNGS-------CVAFVEYSDLQKA 271
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A+ ALQG+++ +D LR++++RN
Sbjct: 272 TQAMLALQGFQVSANDRGG--LRIEYARN 298
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPA 209
P TL+V GLP D+ RE+ +FR GY+ L + + P + FV F
Sbjct: 27 PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSP--VGFVTFLTQQ 84
Query: 210 CAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A A LQG R D + ++ LRL+ +++
Sbjct: 85 DAQDARKMLQGVRFDPE--CAQVLRLELAKS 113
>gi|328768585|gb|EGF78631.1| hypothetical protein BATDEDRAFT_90384 [Batrachochytrium
dendrobatidis JAM81]
Length = 582
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV LP D+ + E+ IF G+K RL + R P +CFV+FE+ A
Sbjct: 449 NTLYVGNLPHDALEEELRQIFTVQSGFK--RLCFRT---RANGP--MCFVEFESVDYATA 501
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP 241
AL L G + +RL +S+NP
Sbjct: 502 ALFQLYGNHLSNSTKGG--IRLSYSKNP 527
>gi|449512082|ref|XP_002199484.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Taeniopygia
guttata]
Length = 221
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PPD L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 144 PPD--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 193
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 194 NQAGAARDALQGFKI 208
>gi|159164270|pdb|2DO4|A Chain A, Solution Structure Of The Rna Binding Domain Of Squamous
Cell Carcinoma Antigen Recognized By T Cells 3
Length = 100
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 20 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 75
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
+ G + E+ +++ S N GP S
Sbjct: 76 MKMDGMTIKEN-----IIKVAIS-NSGPSS 99
>gi|443713681|gb|ELU06415.1| hypothetical protein CAPTEDRAFT_112394, partial [Capitella teleta]
Length = 347
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ RE+ +FR + GY+ L + + P + FV F + A A
Sbjct: 4 TLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTGKNGKTTSP--VGFVTFTSRVAAEAA 61
Query: 215 LSAL-QGYRMDEDDPDSKFLRLQFSRN 240
L QG R D D P + LRL+F+++
Sbjct: 62 KQDLQQGVRFDPDLPQT--LRLEFAKS 86
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
STL+V L +++E+ +F+ G+ +R+ K GG P+ FV++++ CA
Sbjct: 219 CSTLFVANLGPFCSEQELKDLFQSISGFLRLRMHNK-----GGSPV--AFVEYQDVRCAM 271
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSRN 240
A+ LQG + + +R++++RN
Sbjct: 272 EAMLKLQGCVLFSSERGG--IRIEYARN 297
>gi|308800402|ref|XP_003074982.1| U2snrB small nuclear ribonucleoprotein U2B, putative (IC)
[Ostreococcus tauri]
gi|119358847|emb|CAL52253.2| U2snrB small nuclear ribonucleoprotein U2B, putative (IC)
[Ostreococcus tauri]
Length = 221
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+ V+GLPA +T + +F+ F+G+K + KE + G V+F+ PA A+ AL
Sbjct: 151 ILVQGLPAATTTHMLTLLFQQFLGFKSANMSAKEIGI--GQ------VEFDTPAQASAAL 202
Query: 216 SALQGYRMD 224
+ LQG+R++
Sbjct: 203 NGLQGFRLN 211
>gi|345323818|ref|XP_001507791.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Ornithorhynchus anatinus]
Length = 1013
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN A A+ A+
Sbjct: 856 LFISGLPFSCTKEELEEICQAHGTVKDLRLVTN----RAGKPKGLAYVEYENEAQASQAV 911
Query: 216 SALQGYRMDEDD--------PDSKFL-RLQFSRNPG---PRSVFGARGR 252
+ G + ++ P KF R + + PR ++GARG+
Sbjct: 912 LKMDGMTVKQNTIKVAISNPPQRKFPDRPEAGKASAPMVPRQIYGARGK 960
>gi|237840841|ref|XP_002369718.1| U2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|95007435|emb|CAJ20656.1| Rnp (Rrm rna binding domain) containing protein, putative
[Toxoplasma gondii RH]
gi|211967382|gb|EEB02578.1| U2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482936|gb|EEE21267.1| u2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
GT1]
gi|221503274|gb|EEE28972.1| u2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
VEG]
Length = 233
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
+L++E LP +TK + +F + G+ E RL+ + RG + FVDF A AA A
Sbjct: 161 SLFIENLPPKATKTSLDILFGQYRGHTESRLI----EGRG-----VAFVDFSTQAQAAVA 211
Query: 215 LSALQGYRMDEDDP 228
+ +QG+++D P
Sbjct: 212 MQGMQGFKVDPSHP 225
>gi|401842199|gb|EJT44453.1| WHI4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 651
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI---LCFVDFENPAC 210
+TLYV LP D+T++E+ +F G++ + K + G+ +CFV+FE+ +
Sbjct: 534 NTLYVGNLPPDATEQELRQLFSNQPGFRRLSFRNKMNSHGHGNGHGHGPICFVEFEDVSF 593
Query: 211 AATALSALQGYRMDEDDPDSKF-----LRLQFSRNPGPRSVFGARG 251
A AL+ L G ++ P S +RL FS+NP G RG
Sbjct: 594 ATRALAELYGSQLPH--PRSSLNNKGGIRLSFSKNP-----LGVRG 632
>gi|348534739|ref|XP_003454859.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Oreochromis
niloticus]
Length = 282
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ + +
Sbjct: 255 VQAGAARDALQGFKITQTN 273
>gi|365757759|gb|EHM99639.1| Whi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 651
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI---LCFVDFENPAC 210
+TLYV LP D+T++E+ +F G++ + K + G+ +CFV+FE+ +
Sbjct: 534 NTLYVGNLPPDATEQELRQLFSNQPGFRRLSFRNKMNSHGHGNGHGHGPICFVEFEDVSF 593
Query: 211 AATALSALQGYRMDEDDPDSKF-----LRLQFSRNPGPRSVFGARG 251
A AL+ L G ++ P S +RL FS+NP G RG
Sbjct: 594 ATRALAELYGSQLPH--PRSSLNNKGGIRLSFSKNP-----LGVRG 632
>gi|307136276|gb|ADN34103.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 113
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TL++ GLP D RE+ ++FR G+ +L K G ++ F F N A T
Sbjct: 26 NTLFISGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFYNHQSAVT 80
Query: 214 ALSALQGYRMD 224
AL AL G + D
Sbjct: 81 ALHALNGVKFD 91
>gi|387018112|gb|AFJ51174.1| u2 small nuclear ribonucleoprotein B-like [Crotalus adamanteus]
Length = 225
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPN--HILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------ISFVEFENE 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|126324351|ref|XP_001376283.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Monodelphis domestica]
Length = 959
Score = 45.4 bits (106), Expect = 0.022, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 800 LFISGLPFSCTKEELEDICKVHGNVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 855
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG---PRSVFGARGR 252
+ G + ++ +P + L R + R G PR V+GARG+
Sbjct: 856 LKMDGMTIKQNVIKVAISNPPQRKLPDRPEAGRALGAMVPRQVYGARGK 904
>gi|449447844|ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
sativus]
Length = 262
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TL++ GLP D RE+ ++FR G+ +L K G ++ F F N A T
Sbjct: 26 NTLFISGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFYNHQSAVT 80
Query: 214 ALSALQGYRMD 224
AL AL G + D
Sbjct: 81 ALHALNGVKFD 91
>gi|91078752|ref|XP_968271.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein A
[Tribolium castaneum]
gi|270003743|gb|EFA00191.1| hypothetical protein TcasGA2_TC003016 [Tribolium castaneum]
Length = 214
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 141 PGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL 200
PG PP+ L++ LP ++++ ++ +F F G+KEVRLV +
Sbjct: 129 PGGSNAEQPPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD--------I 178
Query: 201 CFVDFENPACAATALSALQGYRM 223
FV+FEN + A ALQG+++
Sbjct: 179 AFVEFENELQSGAAKDALQGFKI 201
>gi|387914214|gb|AFK10716.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392878676|gb|AFM88170.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884228|gb|AFM90946.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884422|gb|AFM91043.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884424|gb|AFM91044.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
Length = 226
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 149 PPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 198
Query: 209 ACAATALSALQGYRM 223
A A ALQG+R+
Sbjct: 199 GQAGAARDALQGFRI 213
>gi|357125296|ref|XP_003564330.1| PREDICTED: uncharacterized protein LOC100840294 isoform 2
[Brachypodium distachyon]
Length = 261
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 31/148 (20%)
Query: 112 RHGATG----PDLVQNLRSSSIDDQLPFDAAARPG---------------HETLPLPPDA 152
RHG G P +N +SS ++LP D + PG ++ +PP
Sbjct: 121 RHGGEGGSDEPSDTEN-DNSSDKNELPADQSGEPGIKQKKRQSPSNDQPDKSSVDIPP-- 177
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
STL++E L T+ E+ +F G+ +++ + RGG P F DF + +
Sbjct: 178 CSTLFIENLGQTCTEEELEEVFSKQPGFHVLKM-----RRRGGMP--AAFADFTDIESST 230
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSRN 240
A++ LQG + D D LR++++R+
Sbjct: 231 AAMNNLQGTILSSSDSDG--LRIEYARS 256
>gi|354490464|ref|XP_003507377.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3,
partial [Cricetulus griseus]
Length = 814
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 655 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 710
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + PG PR ++GARG+
Sbjct: 711 MKMDGMTIKENVIKVAISNPPQRKVPEKPEVRTAPGAPMVPRQMYGARGK 760
>gi|449512588|ref|XP_004176179.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Taeniopygia
guttata]
Length = 221
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 136 DAAARPGHETLPLPPDA--SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLR 193
++A+ PG PD + L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 127 NSASAPGTTPQNQVPDNPPNCILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD-- 184
Query: 194 GGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
+ FV+FEN A A ALQG+++ P S +++ +++
Sbjct: 185 ------IAFVEFENENQAGAARDALQGFKI----PPSHAMKITYAK 220
>gi|313238053|emb|CBY13172.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++T+YVE LP ++ + + +F F G+K+ R + GG FV+F +P A
Sbjct: 129 AATIYVENLPDEANESMLNLLFSQFPGFKKSRPIPA-----GGK----AFVEFADPGAAT 179
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSRN 240
+A ALQG+++ D P ++L +++N
Sbjct: 180 SAKDALQGFKVTPDRP----IKLTYAKN 203
>gi|449480586|ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Cucumis sativus]
Length = 262
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TL++ GLP D RE+ ++FR G+ +L K G ++ F F N A T
Sbjct: 26 NTLFISGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFYNHQSAVT 80
Query: 214 ALSALQGYRMD 224
AL AL G + D
Sbjct: 81 ALHALNGVKFD 91
>gi|440804858|gb|ELR25722.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 287
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL++ G P D RE+ ++FRP+ GY++ L P + FV F + A A
Sbjct: 24 TLWLSGFPLDVKHREIHNLFRPYRGYEDSIL----------KPNGVAFVTFTSHEAAVAA 73
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRNPGPR 244
S + G D D D L+++F++ R
Sbjct: 74 KSDITGLHFDPDGTD--VLKVEFAKQNSKR 101
>gi|392883960|gb|AFM90812.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
Length = 226
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 149 PPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 198
Query: 209 ACAATALSALQGYRM 223
A A ALQG+R+
Sbjct: 199 GQAGAARDALQGFRI 213
>gi|391337372|ref|XP_003743043.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Metaseiulus occidentalis]
Length = 212
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 135 FDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRG 194
F A P PP+A L++ GLP ++ + +F F G+KEVRL+
Sbjct: 121 FXVATGPSGPVADQPPNA--ILFLTGLPEETNDMMLQMLFGQFPGFKEVRLI-------P 171
Query: 195 GDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
G P I FV++E+ A + A + LQG+++ P +R+ F++
Sbjct: 172 GRPDI-AFVEYEDEAQSTAAKNGLQGFKVTPTAP----IRITFAK 211
>gi|226372064|gb|ACO51657.1| U1 small nuclear ribonucleoprotein A [Rana catesbeiana]
Length = 279
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 202 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 251
Query: 209 ACAATALSALQGYRMDEDD 227
A A +LQG+++ + +
Sbjct: 252 VQAGAARESLQGFKITQSN 270
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 146 LPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDF 205
+P +YV LP D ++EV IF + IK ++ G FV+F
Sbjct: 1 MPRGGSEDQKVYVGNLPGDVREKEVEDIFHKY-------GRIKYVDIKSGRGPAFAFVEF 53
Query: 206 ENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
E+ A A+ A GY D + +R++F+R GPR
Sbjct: 54 EDHRDAEDAVRARDGYEF-----DGRRIRVEFTRGVGPRG 88
>gi|384496525|gb|EIE87016.1| hypothetical protein RO3G_11727 [Rhizopus delemar RA 99-880]
Length = 292
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 14/92 (15%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP+ S L+++ LP T++++ +F+ + G++EVR V + + FV++EN
Sbjct: 214 LPPN--SILFLQNLPETITQQQLVDLFQRYPGFREVRTVPAKKS--------IAFVEYEN 263
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
+A A + L GY + D + L++ F+R
Sbjct: 264 EIQSAVARAELSGYFLGPD----QALKVTFAR 291
>gi|255647418|gb|ACU24174.1| unknown [Glycine max]
Length = 241
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
P PP+ + L+++ LP DST + +F + G+KEVR+V E+K P I FV++
Sbjct: 162 PAPPN--NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMV--ETK-----PGI-AFVEYG 211
Query: 207 NPACAATALSALQGYRMDEDDP 228
+ + A+ LQG+++ +P
Sbjct: 212 DEMQSTVAMQTLQGFKITPQNP 233
>gi|149597291|ref|XP_001509496.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like
[Ornithorhynchus anatinus]
Length = 139
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N A
Sbjct: 64 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNEVQAG 115
Query: 213 TALSALQGYRMDEDD 227
A ALQG+++ +++
Sbjct: 116 AARDALQGFKITQNN 130
>gi|356573171|ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
Length = 241
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
P PP+ + L+++ LP DST + +F + G+KEVR+V E+K P I FV++
Sbjct: 162 PAPPN--NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMV--ETK-----PGI-AFVEYG 211
Query: 207 NPACAATALSALQGYRMDEDDP 228
+ + A+ LQG+++ +P
Sbjct: 212 DEMQSTVAMQTLQGFKITPQNP 233
>gi|116791286|gb|ABK25922.1| unknown [Picea sitchensis]
Length = 345
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL++ GLP D RE+ ++FR F GY+ +L E G + F F +
Sbjct: 80 DEVRTLFIAGLPDDVKHREIYNLFREFPGYRSCQLRNSE-----GGTQVYAFTVFTDQQS 134
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
A A+ AL G D + ++ L S + RS
Sbjct: 135 ALAAMHALNGMDFDPETRAVLYIDLAKSNSRSKRS 169
>gi|344255872|gb|EGW11976.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Cricetulus
griseus]
Length = 803
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 644 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 699
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + PG PR ++GARG+
Sbjct: 700 MKMDGMTIKENVIKVAISNPPQRKVPEKPEVRTAPGAPMVPRQMYGARGK 749
>gi|401396957|ref|XP_003879947.1| hypothetical protein NCLIV_003960 [Neospora caninum Liverpool]
gi|325114355|emb|CBZ49912.1| hypothetical protein NCLIV_003960 [Neospora caninum Liverpool]
Length = 234
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
+L++E LP +TK + +F + G+ E RL+ + RG + FVDF A AA A
Sbjct: 162 SLFIENLPPKATKTSLDILFGQYRGHTESRLI----EGRG-----VAFVDFSTQAQAAVA 212
Query: 215 LSALQGYRMDEDDP 228
+ +QG+++D P
Sbjct: 213 MQGMQGFKVDPSHP 226
>gi|357134589|ref|XP_003568899.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Brachypodium
distachyon]
Length = 251
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Query: 132 QLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK 191
QLPF + + +P ++ L+V+ LP D+T + +F + G+KE R++ E+K
Sbjct: 158 QLPFGGGPKVMMPEIIVP---NNILFVQNLPHDTTPMMLQMLFCQYQGFKEARMI--EAK 212
Query: 192 LRGGDPLILCFVDFENPACAATALSALQGYRMDEDD 227
P I FV++ + A A+SALQ +++ +D+
Sbjct: 213 -----PGI-AFVEYGDEGQATAAMSALQNFKISKDN 242
>gi|195995899|ref|XP_002107818.1| hypothetical protein TRIADDRAFT_18899 [Trichoplax adhaerens]
gi|190588594|gb|EDV28616.1| hypothetical protein TRIADDRAFT_18899 [Trichoplax adhaerens]
Length = 204
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 16/94 (17%)
Query: 130 DDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKE 189
D+ +P A ++ E LP + L++ LP ++T+ ++ +F F GYKEVRLV
Sbjct: 114 DEGMPHAAGSQ---EELP-----NKILFLTNLPEETTELMLSMLFNQFPGYKEVRLVPGR 165
Query: 190 SKLRGGDPLILCFVDFENPACAATALSALQGYRM 223
+ FV+FE+ AATA ++L G+++
Sbjct: 166 HD--------IAFVEFESEIQAATARNSLNGFKI 191
>gi|26352049|dbj|BAC39661.1| unnamed protein product [Mus musculus]
Length = 962
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + PG PR ++GARG+
Sbjct: 859 MKMDGMTIRENVIKVAISNPPQRKVPEKPEVRTAPGAPMLPRQMYGARGK 908
>gi|8394239|ref|NP_058622.1| squamous cell carcinoma antigen recognized by T-cells 3 [Mus
musculus]
gi|81917559|sp|Q9JLI8.1|SART3_MOUSE RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3; Short=mSART-3; AltName:
Full=Tumor-rejection antigen SART3
gi|7637845|gb|AAF65228.1|AF172722_1 tumor-rejection antigen SART3 [Mus musculus]
gi|34980898|gb|AAH57156.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Mus
musculus]
gi|148687992|gb|EDL19939.1| squamous cell carcinoma antigen recognized by T-cells 3, isoform
CRA_b [Mus musculus]
Length = 962
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + PG PR ++GARG+
Sbjct: 859 MKMDGMTIRENVIKVAISNPPQRKVPEKPEVRTAPGAPMLPRQMYGARGK 908
>gi|327260920|ref|XP_003215280.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Anolis
carolinensis]
Length = 224
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 147 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 196
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 197 GQAGAARDALQGFKI 211
>gi|157820585|ref|NP_001100626.1| squamous cell carcinoma antigen recognized by T-cells 3 [Rattus
norvegicus]
gi|149063643|gb|EDM13966.1| squamous cell carcinoma antigen recognized by T-cells 3 (predicted)
[Rattus norvegicus]
Length = 960
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 801 LFISGLPFSCTKEELEGICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 856
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + PG PR ++GARG+
Sbjct: 857 LKMDGMTIKENVIKVAISNPPQRKVPEKPEVRTAPGAPMVPRQMYGARGK 906
>gi|371874989|ref|NP_001243119.1| U2 small nuclear ribonucleoprotein B'' [Danio rerio]
Length = 220
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + + FV+FE+
Sbjct: 143 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGKHD--------ISFVEFESE 192
Query: 209 ACAATALSALQGYRM 223
A A A ALQG+R+
Sbjct: 193 AQAGVAKDALQGFRI 207
>gi|224134967|ref|XP_002327534.1| predicted protein [Populus trichocarpa]
gi|222836088|gb|EEE74509.1| predicted protein [Populus trichocarpa]
Length = 281
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 132 QLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK 191
QLP AAA PG E +TL+V GLP D RE+ +IFR G+ +L K
Sbjct: 14 QLP-PAAAAPGGEW----NSGINTLFVSGLPDDVKAREIHNIFRRRPGFDSCQL-----K 63
Query: 192 LRGGDPLILCFVDFENPACAATALSALQGYRMD 224
G ++ F F N A AL +L G + D
Sbjct: 64 YTGRGNQVVAFATFFNHQSAIAALHSLNGVKFD 96
>gi|432953888|ref|XP_004085464.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Oryzias latipes]
Length = 218
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 105 SDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDA---------SST 155
+D V + T D + +L +AA +P +PP +
Sbjct: 86 TDSEVIAKMKGTFGDKEKKKEKKKKAQELAANAAKKPAVRRGAVPPPLYRSVPDNPPNHI 145
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ LP ++ + ++ +F F G+KEVRLV + + FV+FE+ A A
Sbjct: 146 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGKHD--------IAFVEFESDTQAGVAK 197
Query: 216 SALQGYRM 223
ALQG+R+
Sbjct: 198 DALQGFRI 205
>gi|297826425|ref|XP_002881095.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
gi|297326934|gb|EFH57354.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 142 GHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
G E +P ++ L+++ LP ++T + +F + G+KE+R++ P I
Sbjct: 150 GQEAMP----PNNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMI-------DAKPGI-A 197
Query: 202 FVDFENPACAATALSALQGYRMDEDDP 228
FV++E+ A+ A+ LQG+++ +P
Sbjct: 198 FVEYEDDVQASIAMQPLQGFKITPQNP 224
>gi|37748043|gb|AAH59527.1| Snrpb2 protein [Danio rerio]
Length = 229
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + + FV+FE+
Sbjct: 152 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGKHD--------ISFVEFESE 201
Query: 209 ACAATALSALQGYRM 223
A A A ALQG+R+
Sbjct: 202 AQAGVAKDALQGFRI 216
>gi|326507414|dbj|BAK03100.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528465|dbj|BAJ93414.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 249
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 132 QLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK 191
QLPF A + + +P ++ L+V+ LP D+T + F + G+KEVR++ E+K
Sbjct: 157 QLPFGAGPKVMMPEIIVP---NNILFVQELPHDATALMLQMFFCQYPGFKEVRMI--EAK 211
Query: 192 LRGGDPLILCFVDFENPACAATALSALQGYRMDED 226
P I FV++ + A A++ LQG+++ E+
Sbjct: 212 -----PGI-AFVEYGDEGQATAAMNLLQGFKIKEN 240
>gi|90086371|dbj|BAE91738.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN A A
Sbjct: 75 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENDGQAGAAR 126
Query: 216 SALQGYRM 223
ALQG+++
Sbjct: 127 DALQGFKI 134
>gi|126329351|ref|XP_001371614.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Monodelphis
domestica]
Length = 340
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 263 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 312
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 313 VQAGAARDALQGFKITQNN 331
>gi|344255667|gb|EGW11771.1| U2 small nuclear ribonucleoprotein B'' [Cricetulus griseus]
Length = 180
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 93 AAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 143
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 144 -IAFVEFENDGQAGAARDALQGFKI 167
>gi|327276255|ref|XP_003222885.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Anolis
carolinensis]
Length = 280
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 203 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 252
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 253 VQAGAARDALQGFKITQNN 271
>gi|213404620|ref|XP_002173082.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212001129|gb|EEB06789.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 595
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 17/105 (16%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TLYV L A++ + E+ +F GY+ RL + +G P+ CFV+FE+ A
Sbjct: 441 NTLYVGNLAANTKEDELRELFSRQRGYR--RLCFR---TKGISPM--CFVEFEDVKYATA 493
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP--------GPRSVFGAR 250
AL LQG + +RL FS+NP SVFGA
Sbjct: 494 ALFELQGVCLSNSVKGG--IRLSFSKNPLGVRSSADNATSVFGAN 536
>gi|449495575|ref|XP_004176204.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Taeniopygia
guttata]
Length = 225
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 136 DAAARPGHETLPLPPDA--SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLR 193
++A+ PG PD + L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 131 NSASAPGTTPQNQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD-- 188
Query: 194 GGDPLILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 189 ------IAFVEFENENQAGAARDALQGFKI 212
>gi|149041255|gb|EDL95188.1| rCG27500, isoform CRA_a [Rattus norvegicus]
Length = 132
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 45 AAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 95
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 96 -IAFVEFENDGQAGAARDALQGFKI 119
>gi|189053747|dbj|BAG35999.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|116175273|ref|NP_001070696.1| uncharacterized protein LOC768116 [Sus scrofa]
gi|426240670|ref|XP_004014217.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Ovis
aries]
gi|115371759|gb|ABI96204.1| RU2B [Sus scrofa]
Length = 225
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 138 ATPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 188
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 189 -IAFVEFENDGQAGAARDALQGFKI 212
>gi|384251055|gb|EIE24533.1| U1 small nuclear ribonucleo protein A [Coccomyxa subellipsoidea
C-169]
Length = 224
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
L+V+ LP ++T +A +F+ + GY E R+V + R G + FV+FE+ A
Sbjct: 150 KILFVQNLPEETTSAMLALLFQQYAGYIETRMV----EARPG----IAFVEFEDEDKATV 201
Query: 214 ALSALQGYRM 223
A++ LQG+++
Sbjct: 202 AMAGLQGFKI 211
>gi|194375486|dbj|BAG56688.1| unnamed protein product [Homo sapiens]
Length = 203
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N A
Sbjct: 128 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNEVQAG 179
Query: 213 TALSALQGYRMDEDD 227
A ALQG+++ +++
Sbjct: 180 AARDALQGFKITQNN 194
>gi|297716585|ref|XP_002834591.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Pongo abelii]
Length = 99
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN A A
Sbjct: 27 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENDGQAGAAR 78
Query: 216 SALQGYRM 223
ALQG+++
Sbjct: 79 DALQGFKI 86
>gi|157836397|pdb|2U1A|A Chain A, Rna Binding Domain 2 Of Human U1a Protein, Nmr, 20
Structures
Length = 88
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Query: 137 AAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGD 196
A A+P E PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 2 APAQPLSEN---PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD----- 51
Query: 197 PLILCFVDFENPACAATALSALQGYRMDEDD 227
+ FV+F+N A A ALQG+++ +++
Sbjct: 52 ---IAFVEFDNEVQAGAARDALQGFKITQNN 79
>gi|417397429|gb|JAA45748.1| Putative spliceosomal protein snrnp-u1a/u2b [Desmodus rotundus]
Length = 225
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 138 ATPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 188
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 189 -IAFVEFENDGQAGAARDALQGFKI 212
>gi|225710606|gb|ACO11149.1| U1 small nuclear ribonucleoprotein A [Caligus rogercresseyi]
Length = 217
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
A PG PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 133 AVHPGEA----PPN--QILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVPNRHD------ 180
Query: 198 LILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN +A A +LQG+++
Sbjct: 181 --IAFVEFENEVQSAAARESLQGFKI 204
>gi|301787297|ref|XP_002929064.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Ailuropoda
melanoleuca]
gi|410954385|ref|XP_003983845.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Felis
catus]
gi|410954387|ref|XP_003983846.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Felis
catus]
gi|281346668|gb|EFB22252.1| hypothetical protein PANDA_019153 [Ailuropoda melanoleuca]
Length = 225
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 136 DAAARPGHET-LPLPPDA--SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKL 192
+AA G+ T P PD + L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 130 NAANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD- 188
Query: 193 RGGDPLILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 189 -------IAFVEFENDGQAGAARDALQGFKI 212
>gi|4759156|ref|NP_004587.1| U1 small nuclear ribonucleoprotein A [Homo sapiens]
gi|134092|sp|P09012.3|SNRPA_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|315583598|pdb|3PGW|A Chain A, Crystal Structure Of Human U1 Snrnp
gi|315583607|pdb|3PGW|P Chain P, Crystal Structure Of Human U1 Snrnp
gi|37541|emb|CAA29653.1| unnamed protein product [Homo sapiens]
gi|340052|gb|AAA61245.1| U1 snRNP-specific protein A [Homo sapiens]
gi|12653273|gb|AAH00405.1| Small nuclear ribonucleoprotein polypeptide A [Homo sapiens]
gi|14249835|gb|AAH08290.1| Small nuclear ribonucleoprotein polypeptide A [Homo sapiens]
gi|119577399|gb|EAW56995.1| small nuclear ribonucleoprotein polypeptide A, isoform CRA_a [Homo
sapiens]
gi|208967436|dbj|BAG73732.1| small nuclear ribonucleoprotein polypeptide A [synthetic construct]
Length = 282
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|363739959|ref|XP_415181.3| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Gallus gallus]
Length = 915
Score = 44.7 bits (104), Expect = 0.037, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN A A+ A+
Sbjct: 755 LFISGLPFSCTKEELEDICKAHGNVKDIRLVTN----RAGKPKGLAYVEYENEAQASQAV 810
Query: 216 SALQGYRMDE-------DDPDSKFL-----RLQFSRNPGPRSVFGARGR 252
+ G + E +P + L + S+ PR ++GARG+
Sbjct: 811 LKMDGLTIKEHVIKVAISNPPLRKLPDKAEAGRASQFAVPRQIYGARGK 859
>gi|440910289|gb|ELR60098.1| U1 small nuclear ribonucleoprotein A, partial [Bos grunniens mutus]
Length = 287
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 210 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 259
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 260 VQAGAARDALQGFKITQNN 278
>gi|426388777|ref|XP_004060809.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Gorilla
gorilla gorilla]
Length = 282
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|417409102|gb|JAA51075.1| Putative spliceosomal protein snrnp-u1a/u2b, partial [Desmodus
rotundus]
Length = 258
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 181 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 230
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 231 VQAGAARDALQGFKITQNN 249
>gi|383873129|ref|NP_001244434.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|114677331|ref|XP_512674.2| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Pan
troglodytes]
gi|297704832|ref|XP_002829283.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Pongo abelii]
gi|397482634|ref|XP_003812525.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Pan paniscus]
gi|402905610|ref|XP_003915609.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Papio anubis]
gi|355703564|gb|EHH30055.1| hypothetical protein EGK_10636 [Macaca mulatta]
gi|355755853|gb|EHH59600.1| hypothetical protein EGM_09749 [Macaca fascicularis]
gi|380784673|gb|AFE64212.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|383414025|gb|AFH30226.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|384943590|gb|AFI35400.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|410207170|gb|JAA00804.1| small nuclear ribonucleoprotein polypeptide A [Pan troglodytes]
gi|410287236|gb|JAA22218.1| small nuclear ribonucleoprotein polypeptide A [Pan troglodytes]
Length = 282
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|440893400|gb|ELR46188.1| U2 small nuclear ribonucleoprotein B'', partial [Bos grunniens
mutus]
Length = 233
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 146 ATPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 196
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 197 -IAFVEFENDGQAGAARDALQGFKI 220
>gi|351715411|gb|EHB18330.1| U1 small nuclear ribonucleoprotein A [Heterocephalus glaber]
Length = 282
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|114051315|ref|NP_001039504.1| U1 small nuclear ribonucleoprotein A [Bos taurus]
gi|187607541|ref|NP_001119825.1| U1 small nuclear ribonucleoprotein A [Ovis aries]
gi|122142801|sp|Q2KIR1.1|SNRPA_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|86437996|gb|AAI12545.1| Small nuclear ribonucleoprotein polypeptide A [Bos taurus]
gi|184191137|gb|ACC76781.1| SNPRA [Ovis aries]
gi|296477802|tpg|DAA19917.1| TPA: U1 small nuclear ribonucleoprotein A [Bos taurus]
Length = 282
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|12851426|dbj|BAB29037.1| unnamed protein product [Mus musculus]
Length = 287
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 210 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 259
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 260 VQAGAARDALQGFKITQNN 278
>gi|444732044|gb|ELW72368.1| U1 small nuclear ribonucleoprotein A [Tupaia chinensis]
Length = 282
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|390479015|ref|XP_003735632.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Callithrix jacchus]
Length = 275
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 198 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 247
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 248 VQAGAARDALQGFKITQNN 266
>gi|363731244|ref|XP_003640940.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Gallus
gallus]
Length = 207
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 130 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 179
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 180 CQAGAARDALQGFKI 194
>gi|403263452|ref|XP_003924046.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Saimiri
boliviensis boliviensis]
gi|197692169|dbj|BAG70048.1| small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|197692419|dbj|BAG70173.1| small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
Length = 225
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|354486243|ref|XP_003505291.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Cricetulus griseus]
Length = 284
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 207 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 256
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 257 VQAGAARDALQGFKITQNN 275
>gi|348552486|ref|XP_003462058.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cavia
porcellus]
Length = 282
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|354542538|ref|NP_001238897.1| U2 small nuclear ribonucleoprotein B'' [Canis lupus familiaris]
Length = 225
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 136 DAAARPGHET-LPLPPDA--SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKL 192
+AA G+ T P PD + L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 130 NAANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD- 188
Query: 193 RGGDPLILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 189 -------IAFVEFENDGQAGAARDALQGFKI 212
>gi|145323766|ref|NP_001077472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189939|gb|AEE28060.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 200
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 49/87 (56%), Gaps = 12/87 (13%)
Query: 142 GHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
G +T+P ++ L++ LP ++ + +F + G+KE+R++ + + G +
Sbjct: 118 GQDTMP----PNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMI----EAKPG----IA 165
Query: 202 FVDFENPACAATALSALQGYRMDEDDP 228
FV++E+ ++ A+ ALQG+++ +P
Sbjct: 166 FVEYEDDVQSSMAMQALQGFKITPQNP 192
>gi|432109445|gb|ELK33675.1| U1 small nuclear ribonucleoprotein A [Myotis davidii]
Length = 282
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|395859647|ref|XP_003802145.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Otolemur
garnettii]
Length = 282
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|295314954|gb|ADF97627.1| small nuclear ribonucleoprotein polypeptide A [Hypophthalmichthys
molitrix]
Length = 281
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 253
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A A ALQG+++ + S +++ F++
Sbjct: 254 VQAGAAREALQGFKITQ----SNAMKISFAK 280
>gi|441653781|ref|XP_003270568.2| PREDICTED: U1 small nuclear ribonucleoprotein A [Nomascus
leucogenys]
Length = 211
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 134 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 183
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 184 VQAGAARDALQGFKITQNN 202
>gi|355721034|gb|AES07131.1| small nuclear ribonucleoprotein polypeptide A [Mustela putorius
furo]
Length = 281
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|225470686|ref|XP_002263312.1| PREDICTED: uncharacterized protein LOC100261746 [Vitis vinifera]
Length = 751
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 136 DAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGG 195
D ++P ET + + LYV LP + +A +F PF + + VIK+ G
Sbjct: 501 DTQSKPNKET------SDADLYVGYLPQTMDENCLAELFAPFGKIAKTK-VIKDRAT--G 551
Query: 196 DPLILCFVDFENPACAATALSALQGYRMD 224
FV FENPA AA ALS + GY++D
Sbjct: 552 ISKGYGFVKFENPAHAALALSHMHGYKID 580
>gi|156088599|ref|XP_001611706.1| U2 small nuclear ribonucleoprotein B' [Babesia bovis T2Bo]
gi|154798960|gb|EDO08138.1| U2 small nuclear ribonucleoprotein B', putative [Babesia bovis]
Length = 213
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+VE L D K V +F+ + GYK+ R V E K + FVDF A
Sbjct: 138 TLFVENLHPDMNKMSVELLFQQYPGYKDTRFV--EGK-------CVAFVDFATAYQGEVA 188
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRNP 241
L LQG+ + S LR+ F+++P
Sbjct: 189 LQGLQGFSVSH----SHALRISFAKSP 211
>gi|149640848|ref|XP_001514376.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Ornithorhynchus anatinus]
gi|345329106|ref|XP_003431335.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like
[Ornithorhynchus anatinus]
Length = 225
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|50738734|ref|XP_419331.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Gallus
gallus]
gi|326914835|ref|XP_003203728.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Meleagris
gallopavo]
Length = 226
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 141 PGHETLP-LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI 199
P ++ +P PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 140 PQNQQVPDNPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD-------- 189
Query: 200 LCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 190 IAFVEFENECQAGAARDALQGFKI 213
>gi|123994687|gb|ABM84945.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
gi|261861662|dbj|BAI47353.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
Length = 225
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|116175267|ref|NP_001070690.1| U1 small nuclear ribonucleoprotein A [Sus scrofa]
gi|122131847|sp|Q06AA4.1|SNRPA_PIG RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|115371743|gb|ABI96196.1| SNRPA [Sus scrofa]
Length = 282
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|157819927|ref|NP_001102062.1| U2 small nuclear ribonucleoprotein B'' [Rattus norvegicus]
gi|354492046|ref|XP_003508163.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cricetulus
griseus]
gi|149041257|gb|EDL95190.1| rCG27500, isoform CRA_c [Rattus norvegicus]
gi|197245976|gb|AAI68760.1| Small nuclear ribonucleoprotein polypeptide B'' [Rattus norvegicus]
Length = 225
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 138 AAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 188
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 189 -IAFVEFENDGQAGAARDALQGFKI 212
>gi|41054443|ref|NP_955965.1| U1 small nuclear ribonucleoprotein A [Danio rerio]
gi|39850066|gb|AAH64308.1| Small nuclear ribonucleoprotein polypeptide A [Danio rerio]
Length = 281
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 253
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A A ALQG+++ + S +++ F++
Sbjct: 254 VQAGAAREALQGFKITQ----SNAMKISFAK 280
>gi|410983004|ref|XP_003997834.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Felis catus]
Length = 282
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|431920192|gb|ELK18231.1| U1 small nuclear ribonucleoprotein A [Pteropus alecto]
Length = 282
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|56605690|ref|NP_001008304.1| U1 small nuclear ribonucleoprotein A [Rattus norvegicus]
gi|55562825|gb|AAH86331.1| Small nuclear ribonucleoprotein polypeptide A [Rattus norvegicus]
gi|149056537|gb|EDM07968.1| small nuclear ribonucleoprotein polypeptide A [Rattus norvegicus]
Length = 281
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 253
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 254 VQAGAARDALQGFKITQNN 272
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D +++ +F YK +++ + K R G P FV+F++P A A+
Sbjct: 11 IYVGNLPPDIRTKDIQDLF-----YKFGKVIFVDLKNRRGPPF--AFVEFDDPRDAEDAV 63
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVF-GARG 251
A GY D D LR++F R GP + F G RG
Sbjct: 64 HARDGY-----DYDGYRLRVEFPRGGGPSNNFRGGRG 95
>gi|145228995|ref|XP_001388806.1| multiple RNA-binding domain-containing protein 1 [Aspergillus niger
CBS 513.88]
gi|134054902|emb|CAK36914.1| unnamed protein product [Aspergillus niger]
gi|350638000|gb|EHA26356.1| multiple RNA-binding domain-containing protein [Aspergillus niger
ATCC 1015]
Length = 825
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCF--VDFENPAC 210
++TL+V+ L +T + +FRP G+ ++ K G L + F V+F + A
Sbjct: 596 TTTLFVKNLNFATTNQSFVDLFRPLDGFVSAKIKTKPDPKHPGQTLSMGFGFVEFRSKAQ 655
Query: 211 AATALSALQGYRMDE 225
A +AL+A+ GY++D+
Sbjct: 656 AQSALAAMNGYKLDQ 670
>gi|451993063|gb|EMD85538.1| hypothetical protein COCHEDRAFT_1187995 [Cochliobolus
heterostrophus C5]
Length = 828
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++TLYV L ++ + F+P G++ ++ K RG + FV+F +P A
Sbjct: 603 TATLYVRNLNFSTSTERLTEAFKPLSGFRSAKVKTKVDPKRGVLSMGFGFVEFNSPETAT 662
Query: 213 TALSALQGYRMD 224
AL A+ GY ++
Sbjct: 663 AALRAMDGYDLE 674
>gi|73948310|ref|XP_533663.2| PREDICTED: U1 small nuclear ribonucleoprotein A [Canis lupus
familiaris]
gi|149722301|ref|XP_001499386.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Equus
caballus]
gi|301776649|ref|XP_002923740.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Ailuropoda
melanoleuca]
gi|403305332|ref|XP_003943221.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Saimiri
boliviensis boliviensis]
gi|281340732|gb|EFB16316.1| hypothetical protein PANDA_012942 [Ailuropoda melanoleuca]
Length = 282
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 255 VQAGAARDALQGFKITQNN 273
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D +++ +F YK +++ + K R G P FV+F++P A A+
Sbjct: 11 IYVGNLPPDIRTKDIQDLF-----YKFGKVIFVDLKNRRGPPF--AFVEFDDPRDAEDAV 63
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVF-GARG 251
A GY D D LR++F R GP + F G RG
Sbjct: 64 HARDGY-----DYDGYRLRVEFPRGGGPSNNFRGGRG 95
>gi|148696477|gb|EDL28424.1| mCG19497, isoform CRA_a [Mus musculus]
Length = 132
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 45 AAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 95
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 96 -IAFVEFENDGQAGAARDALQGFKI 119
>gi|390333482|ref|XP_789234.3| PREDICTED: U1 small nuclear ribonucleoprotein A-like
[Strongylocentrotus purpuratus]
Length = 235
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
+P + ++ L++ LP ++ + + +F+ F GYKEVRLV + FV+F N
Sbjct: 155 VPDEPNNILFLTNLPEETNELMLEVLFKQFNGYKEVRLVPGRHD--------IAFVEFAN 206
Query: 208 PACAATALSALQGYRM 223
+ TA ALQG+++
Sbjct: 207 EQQSGTAKDALQGFKI 222
>gi|355721048|gb|AES07135.1| small nuclear ribonucleoprotein polypeptide B [Mustela putorius
furo]
Length = 99
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN A A
Sbjct: 27 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENDGQAGAAR 78
Query: 216 SALQGYRM 223
ALQG+++
Sbjct: 79 DALQGFKI 86
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D +++ +F YK +++ + K R G P FV+F++P A A+
Sbjct: 11 IYVGNLPPDIRTKDIQDLF-----YKFGKVIFVDLKNRRGPPF--AFVEFDDPRDAEDAV 63
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVF-GARG 251
A GY D D LR++F R GP + F G RG
Sbjct: 64 HARDGY-----DYDGYRLRVEFPRGGGPSNNFRGGRG 95
>gi|4507123|ref|NP_003083.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|38149981|ref|NP_937863.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|332238115|ref|XP_003268248.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1
[Nomascus leucogenys]
gi|332238117|ref|XP_003268249.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2
[Nomascus leucogenys]
gi|397478615|ref|XP_003810638.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Pan
paniscus]
gi|397478617|ref|XP_003810639.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Pan
paniscus]
gi|426391004|ref|XP_004061878.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1
[Gorilla gorilla gorilla]
gi|426391006|ref|XP_004061879.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2
[Gorilla gorilla gorilla]
gi|134095|sp|P08579.1|RU2B_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|340105|gb|AAA36796.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|17390031|gb|AAH18022.1| Small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|22477822|gb|AAH36737.1| Small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|119630689|gb|EAX10284.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_a
[Homo sapiens]
gi|119630690|gb|EAX10285.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_a
[Homo sapiens]
gi|123979922|gb|ABM81790.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
gi|189066590|dbj|BAG35840.1| unnamed protein product [Homo sapiens]
gi|410226668|gb|JAA10553.1| small nuclear ribonucleoprotein polypeptide B [Pan troglodytes]
gi|410226670|gb|JAA10554.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
gi|410263358|gb|JAA19645.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
gi|410342435|gb|JAA40164.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
Length = 225
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|403283665|ref|XP_003933231.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Saimiri
boliviensis boliviensis]
Length = 225
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|432105098|gb|ELK31467.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Myotis
davidii]
Length = 1010
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++E+ + A+ A+
Sbjct: 850 LFISGLPFSCTKEELEEICKAHGTVKDIRLVTN----RAGKPKGLAYVEYESESQASQAV 905
Query: 216 SALQGYRMDED-------DPDSKFL--RLQFSRNPG----PRSVFGARGR 252
+ G + E+ +P + + + + + PG PR +GARG+
Sbjct: 906 MKMDGMTIKENVIKVAISNPPQRKVPEKPEARKGPGGPNVPRQTYGARGK 955
>gi|395507829|ref|XP_003758221.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Sarcophilus
harrisii]
Length = 225
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|225434417|ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
gi|297745807|emb|CBI15863.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 8/76 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++ L+++ LP +T + +F+ + G++EVR++ E+K P I FV+FE+ ++
Sbjct: 159 NNILFIQNLPHQTTSMMLQVLFQQYPGFREVRMI--EAK-----PGI-AFVEFEDDVQSS 210
Query: 213 TALSALQGYRMDEDDP 228
A+ ALQG+++ +P
Sbjct: 211 MAMEALQGFKITPQNP 226
>gi|114681082|ref|XP_514523.2| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 5 [Pan
troglodytes]
gi|114681084|ref|XP_001137830.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 4 [Pan
troglodytes]
gi|296200238|ref|XP_002747509.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Callithrix jacchus]
gi|296200240|ref|XP_002747510.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 3
[Callithrix jacchus]
Length = 225
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|395858003|ref|XP_003801365.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Otolemur
garnettii]
Length = 225
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|297706381|ref|XP_002830019.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Pongo
abelii]
Length = 225
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|225707030|gb|ACO09361.1| U2 small nuclear ribonucleoprotein B [Osmerus mordax]
Length = 219
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + + FV+FE+
Sbjct: 142 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGKHD--------ISFVEFESE 191
Query: 209 ACAATALSALQGYRM 223
A A A ALQG+R+
Sbjct: 192 ARAGVAKDALQGFRI 206
>gi|55732648|emb|CAH93023.1| hypothetical protein [Pongo abelii]
Length = 225
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|395529330|ref|XP_003766769.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Sarcophilus
harrisii]
Length = 241
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 164 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 213
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 214 VQAGAARDALQGFKITQNN 232
>gi|355784710|gb|EHH65561.1| U2 small nuclear ribonucleoprotein B'' [Macaca fascicularis]
Length = 225
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|386781069|ref|NP_001247823.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|402883260|ref|XP_003905142.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Papio
anubis]
gi|402883262|ref|XP_003905143.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Papio
anubis]
gi|402883264|ref|XP_003905144.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 3 [Papio
anubis]
gi|355563375|gb|EHH19937.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|380787253|gb|AFE65502.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|383414075|gb|AFH30251.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|384942630|gb|AFI34920.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
Length = 225
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|443720886|gb|ELU10438.1| hypothetical protein CAPTEDRAFT_179768 [Capitella teleta]
Length = 218
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
L++ LP ++T+ ++ +F F G++EVRLV + FV+FEN A A
Sbjct: 145 ILFLTNLPEETTEMMLSMLFNQFPGFREVRLVPGRHD--------IAFVEFENEVQAGAA 196
Query: 215 LSALQGYRM 223
ALQG+++
Sbjct: 197 KDALQGFKI 205
>gi|410909846|ref|XP_003968401.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1
[Takifugu rubripes]
Length = 273
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 196 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 245
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A A ALQG+++ + S +++ F++
Sbjct: 246 VQAGAARDALQGFKITQ----SNAMKISFAK 272
>gi|359718900|ref|NP_001240769.1| U2 small nuclear ribonucleoprotein B'' [Equus caballus]
gi|328908863|gb|AEB61099.1| u2 small nuclear ribonucleoprotein B''-like protein [Equus
caballus]
Length = 225
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|840823|emb|CAA44752.1| U2-snRNP-specific b'' [Mus musculus]
Length = 123
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN A A
Sbjct: 51 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENDGQAGAAR 102
Query: 216 SALQGYRM 223
ALQG+++
Sbjct: 103 DALQGFKI 110
>gi|149234798|ref|XP_001523278.1| hypothetical protein LELG_05504 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453067|gb|EDK47323.1| hypothetical protein LELG_05504 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 817
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKE--------SKLRGGDPLI------ 199
+TLYV LP D+T+ E+ +F P G++ + K + GG
Sbjct: 640 NTLYVGNLPPDATETELRTLFAPQKGFRRLSFRTKNATPSSSTGTNGNGGASTTSSHNHG 699
Query: 200 -LCFVDFENPACAATALSALQGYRMDE-DDPDSK-FLRLQFSRNPGPRSVFGARG 251
+CFV+FE+ A A AL+ L G + ++K +RL FS+NP G RG
Sbjct: 700 PMCFVEFEDVAHATRALAELYGAALPRPQGLNAKGGIRLSFSKNP-----LGVRG 749
>gi|114052106|ref|NP_056597.3| U1 small nuclear ribonucleoprotein A [Mus musculus]
gi|114052541|ref|NP_001040102.1| U1 small nuclear ribonucleoprotein A [Mus musculus]
gi|41017904|sp|Q62189.3|SNRPA_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|349004|gb|AAC37611.1| small nuclear RNA [Mus musculus]
gi|13096860|gb|AAH03229.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|62740156|gb|AAH94006.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|66794539|gb|AAH96648.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|148692250|gb|EDL24197.1| mCG22754, isoform CRA_a [Mus musculus]
gi|148692251|gb|EDL24198.1| mCG22754, isoform CRA_a [Mus musculus]
Length = 287
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 210 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 259
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 260 VQAGAARDALQGFKITQNN 278
>gi|449476847|ref|XP_002193793.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Taeniopygia guttata]
Length = 928
Score = 44.3 bits (103), Expect = 0.045, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ + + K++RLV R G P L +V++E+ A A+ A+
Sbjct: 768 LFISGLPFSCTKEELEEVCKAHGNVKDIRLVTN----RAGKPKGLAYVEYESEAQASQAV 823
Query: 216 SALQGYRMDED-----DPDSKFLRLQFSRNPG-------PRSVFGARGR 252
+ G M + + +L PG PR ++GARG+
Sbjct: 824 LKMDGLTMKDHVIKVMISNPPLRKLPDRPEPGRASLPMAPRQIYGARGK 872
>gi|300796380|ref|NP_001179481.1| U2 small nuclear ribonucleoprotein B'' [Bos taurus]
gi|426240672|ref|XP_004014218.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Ovis
aries]
gi|296481542|tpg|DAA23657.1| TPA: small nuclear ribonucleoprotein polypeptide B'' [Bos taurus]
Length = 218
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 131 ATPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 181
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 182 -IAFVEFENDGQAGAARDALQGFKI 205
>gi|444729539|gb|ELW69952.1| U2 small nuclear ribonucleoprotein B'' [Tupaia chinensis]
Length = 225
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|380024306|ref|XP_003695942.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Apis florea]
Length = 248
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D +++ +F YK +++ + K R G P FV+F++P A A+
Sbjct: 11 IYVGNLPPDIRTKDIQDLF-----YKFGKVIFVDLKNRRGPPF--AFVEFDDPRDAEDAV 63
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVF-GARG 251
A GY D D LR++F R GP + F G RG
Sbjct: 64 HARDGY-----DYDGYRLRVEFPRGGGPSNNFRGGRG 95
>gi|194379396|dbj|BAG63664.1| unnamed protein product [Homo sapiens]
Length = 527
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 367 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 422
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSV 246
+ G + E+ +++ S NP R V
Sbjct: 423 MKMDGMTIKEN-----IIKVAIS-NPPQRKV 447
>gi|357125294|ref|XP_003564329.1| PREDICTED: uncharacterized protein LOC100840294 isoform 1
[Brachypodium distachyon]
Length = 302
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 19/122 (15%)
Query: 118 PDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPF 177
P + Q R S +DQ P ++ +PP STL++E L T+ E+ +F
Sbjct: 194 PGIKQKKRQSPSNDQ--------PDKSSVDIPP--CSTLFIENLGQTCTEEELEEVFSKQ 243
Query: 178 VGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQF 237
G+ +++ + RGG P F DF + + A++ LQG + D D LR+++
Sbjct: 244 PGFHVLKM-----RRRGGMP--AAFADFTDIESSTAAMNNLQGTILSSSDSDG--LRIEY 294
Query: 238 SR 239
+R
Sbjct: 295 AR 296
>gi|349605397|gb|AEQ00652.1| U2 small nuclear ribonucleoprotein B''-like protein, partial [Equus
caballus]
Length = 197
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 120 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 169
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 170 GQAGAARDALQGFKI 184
>gi|358372076|dbj|GAA88681.1| pre-rRNA processing protein Mrd1 [Aspergillus kawachii IFO 4308]
Length = 825
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCF--VDFENPAC 210
++TL+V+ L +T + +FRP G+ ++ K G L + F V+F + A
Sbjct: 596 TTTLFVKNLNFATTTQSFVDLFRPLDGFVSAKIKTKPDPKHPGQTLSMGFGFVEFRSKAQ 655
Query: 211 AATALSALQGYRMDE 225
A +AL+A+ GY++D+
Sbjct: 656 AQSALAAMNGYKLDQ 670
>gi|344279401|ref|XP_003411476.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Loxodonta
africana]
Length = 225
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|23956110|ref|NP_067310.1| U2 small nuclear ribonucleoprotein B'' [Mus musculus]
gi|52783420|sp|Q9CQI7.1|RU2B_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|12847289|dbj|BAB27510.1| unnamed protein product [Mus musculus]
gi|12851400|dbj|BAB29026.1| unnamed protein product [Mus musculus]
gi|20072417|gb|AAH26794.1| U2 small nuclear ribonucleoprotein B [Mus musculus]
gi|126035620|gb|ABN72533.1| U2 small nuclear ribonucleoprotein B [Mus spretus]
gi|148696479|gb|EDL28426.1| mCG19497, isoform CRA_c [Mus musculus]
Length = 225
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 138 AAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 188
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 189 -IAFVEFENDGQAGAARDALQGFKI 212
>gi|326485490|gb|EGE09500.1| pre-rRNA processing protein Mrd1 [Trichophyton equinum CBS 127.97]
Length = 835
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCF--VD 204
P P S+TL+V L +T ++ +FRP G+ ++ + + G+ L + F V+
Sbjct: 602 PEAPMESATLFVRNLNFTTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVE 661
Query: 205 FENPACAATALSALQGYRMDEDD 227
F++ A A AL AL GY++D+ +
Sbjct: 662 FKSRAQAEAALKALNGYKLDQHE 684
>gi|225719682|gb|ACO15687.1| U1 small nuclear ribonucleoprotein A [Caligus clemensi]
Length = 217
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
A PG PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 133 AVHPGEA----PPN--QILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVPNRHD------ 180
Query: 198 LILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN +A A +LQG+++
Sbjct: 181 --IAFVEFENEVQSAAARESLQGFKI 204
>gi|351695324|gb|EHA98242.1| U2 small nuclear ribonucleoprotein B'' [Heterocephalus glaber]
Length = 224
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 145 TLPLPPDA--SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCF 202
T P PD + L++ LP ++ + ++ +F F G+KEVRLV + F
Sbjct: 139 TNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAF 190
Query: 203 VDFENPACAATALSALQGYRM 223
V+FEN A A ALQG+++
Sbjct: 191 VEFENDGQAGAARDALQGFKI 211
>gi|149041256|gb|EDL95189.1| rCG27500, isoform CRA_b [Rattus norvegicus]
Length = 203
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 116 AAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 166
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 167 -IAFVEFENDGQAGAARDALQGFKI 190
>gi|30679897|ref|NP_172177.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189938|gb|AEE28059.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 228
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 49/87 (56%), Gaps = 12/87 (13%)
Query: 142 GHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
G +T+P ++ L++ LP ++ + +F + G+KE+R++ + + G +
Sbjct: 146 GQDTMP----PNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMI----EAKPG----IA 193
Query: 202 FVDFENPACAATALSALQGYRMDEDDP 228
FV++E+ ++ A+ ALQG+++ +P
Sbjct: 194 FVEYEDDVQSSMAMQALQGFKITPQNP 220
>gi|8954049|gb|AAF82223.1|AC067971_31 Strong similarity to a small nuclear ribonucleoprotein U2B'' -
potato from Solanum tuberosum gb|M72892. It contains an
RNA recognition motif PF|00076. ESTs gb|AA041158 and
gb|AI992475 come from this gene [Arabidopsis thaliana]
Length = 247
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 49/87 (56%), Gaps = 12/87 (13%)
Query: 142 GHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
G +T+P ++ L++ LP ++ + +F + G+KE+R++ + + G +
Sbjct: 165 GQDTMP----PNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMI----EAKPG----IA 212
Query: 202 FVDFENPACAATALSALQGYRMDEDDP 228
FV++E+ ++ A+ ALQG+++ +P
Sbjct: 213 FVEYEDDVQSSMAMQALQGFKITPQNP 239
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
+ + ST+YV LP D ++EV +F Y ++R V E K R G+ FV F++
Sbjct: 1 MSSSSESTIYVGNLPPDVREKEVEDLFHK---YGDIRNV--EVKTRHGETHSFAFVQFDS 55
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQF 237
A A+ + GY D D K LR++F
Sbjct: 56 HRDAKEAVRSRDGY-----DFDGKRLRVEF 80
>gi|320167853|gb|EFW44752.1| SNF [Capsaspora owczarzaki ATCC 30864]
Length = 262
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 131 DQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFV-GYKEVRLVIKE 189
+ P +PG P + L+V+ LP T+ ++ ++FR + G +VRLV
Sbjct: 165 NHAPMLQQQQPGFGFSQAPEIPHNILFVQNLPQGITQDDIFNLFRGYTAGSCDVRLVPNR 224
Query: 190 SKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKF 232
+ + FV++EN AA A + L GY+M +++ F
Sbjct: 225 ADI--------AFVEYENEGIAANAKATLHGYKMGDNNLSVTF 259
>gi|428171290|gb|EKX40208.1| hypothetical protein GUITHDRAFT_75811, partial [Guillardia theta
CCMP2712]
Length = 209
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
L++E LP D T +VA +F PF G+KEVRLV R G + FV++E+ + A
Sbjct: 151 ILFLENLPLDITSDDVAAVFSPFPGFKEVRLVPS----RPG----IAFVEYESDVQSGMA 202
Query: 215 LSALQ 219
++ LQ
Sbjct: 203 MARLQ 207
>gi|30679892|ref|NP_850936.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75329133|sp|Q8H1S6.1|RU2B2_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B'' 2; Short=U2
snRNP B'' 2
gi|23296313|gb|AAN13038.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
gi|332189937|gb|AEE28058.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 229
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 49/87 (56%), Gaps = 12/87 (13%)
Query: 142 GHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
G +T+P ++ L++ LP ++ + +F + G+KE+R++ + + G +
Sbjct: 147 GQDTMP----PNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMI----EAKPG----IA 194
Query: 202 FVDFENPACAATALSALQGYRMDEDDP 228
FV++E+ ++ A+ ALQG+++ +P
Sbjct: 195 FVEYEDDVQSSMAMQALQGFKITPQNP 221
>gi|395859649|ref|XP_003802146.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Otolemur
garnettii]
Length = 231
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 154 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 203
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A A ALQG+++ +++ +++ F++
Sbjct: 204 VQAGAARDALQGFKITQNNA----MKISFAK 230
>gi|291389004|ref|XP_002711008.1| PREDICTED: small nuclear ribonucleoprotein polypeptide B''
[Oryctolagus cuniculus]
Length = 225
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 137 AAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGD 196
A + P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 136 ANSTPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD----- 188
Query: 197 PLILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 189 ---IAFVEFENDGQAGAARDALQGFKI 212
>gi|449280001|gb|EMC87413.1| U2 small nuclear ribonucleoprotein B'' [Columba livia]
Length = 226
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 149 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 198
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 199 NQAGAARDALQGFKI 213
>gi|348683636|gb|EGZ23451.1| hypothetical protein PHYSODRAFT_484798 [Phytophthora sojae]
Length = 236
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+ L++E LP K ++ +F+ + G+KEVR+V + L FV+F + A AA
Sbjct: 161 NKILFLEALPESCNKEMLSVLFKQYQGFKEVRMVPGKKG--------LAFVEFGDEAQAA 212
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSR 239
AL L G+++ D L++ F++
Sbjct: 213 IALQGLFGFKLTPTDA----LKVSFAK 235
>gi|219121341|ref|XP_002185896.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582745|gb|ACI65366.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 226
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 136 DAAARPGHETLPLPPDA---SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKL 192
++A P +P P D S L + LP+D + + +FR + GYKEVR+
Sbjct: 133 ESAVAPPEGDMPSPQDTAPPSKYLLAQNLPSDCNEMMLGMLFRQYSGYKEVRMP------ 186
Query: 193 RGGDPLILCFVDFENPACAATALSALQGYRM 223
R G L F++FE+ A A +AL G+++
Sbjct: 187 RPG----LAFIEFEDEPHATLARNALNGFKL 213
>gi|348581624|ref|XP_003476577.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cavia
porcellus]
Length = 224
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 147 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 196
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 197 GQAGAARDALQGFKI 211
>gi|296818279|ref|XP_002849476.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
gi|238839929|gb|EEQ29591.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
Length = 808
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCF--VD 204
P P S+TL+V L +T ++ +FRP G+ ++ + + G+ L + F V+
Sbjct: 575 PEAPMESATLFVRNLNFITTDTGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVE 634
Query: 205 FENPACAATALSALQGYRMDEDD 227
F++ A A AL AL GY++D+ +
Sbjct: 635 FKSRAQAEAALKALNGYKLDQHE 657
>gi|68469094|ref|XP_721334.1| hypothetical protein CaO19.6494 [Candida albicans SC5314]
gi|68470119|ref|XP_720821.1| hypothetical protein CaO19.13847 [Candida albicans SC5314]
gi|77022790|ref|XP_888839.1| hypothetical protein CaO19_6494 [Candida albicans SC5314]
gi|46442709|gb|EAL01996.1| hypothetical protein CaO19.13847 [Candida albicans SC5314]
gi|46443247|gb|EAL02530.1| hypothetical protein CaO19.6494 [Candida albicans SC5314]
gi|76573652|dbj|BAE44736.1| hypothetical protein [Candida albicans]
Length = 704
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI-------------- 199
+TLYV LP D+T+ E+ +F P G++ + K
Sbjct: 546 NTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQSSSNNGTGSGGGSGGGGGHSHGP 605
Query: 200 LCFVDFENPACAATALSALQGYRMDEDDPDSKF--LRLQFSRNPGPRSVFGARG 251
+CFV+FE+ A A AL+ L G + + + +RL FS+NP G RG
Sbjct: 606 MCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNP-----LGVRG 654
>gi|242763791|ref|XP_002340645.1| U1 small nuclear ribonucleoprotein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218723841|gb|EED23258.1| U1 small nuclear ribonucleoprotein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 254
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP+ L++ LP D+ +A IF F G++EVRLV R G + FV++EN
Sbjct: 175 LPPN--KILFLRELPEDADSDMLAGIFGRFEGFREVRLVPG----RKG----IAFVEYEN 224
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A A +A A G M P++K +R+ + R
Sbjct: 225 EAGAISAKEATSGMPM---GPNAKPIRVTYQRQ 254
>gi|449513226|ref|XP_002193869.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Taeniopygia
guttata]
Length = 322
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 245 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 294
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A A ALQG+++ P S +++ +++
Sbjct: 295 NQAGAARDALQGFKI----PLSHAMKITYAK 321
>gi|156548050|ref|XP_001606482.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Nasonia vitripennis]
gi|345485456|ref|XP_003425274.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Nasonia vitripennis]
Length = 230
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++++ ++ +F F G+KEVRLV + FV+FEN
Sbjct: 153 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD--------IAFVEFENE 202
Query: 209 ACAATALSALQGYRM 223
+ A ALQG+++
Sbjct: 203 VQSGAAKDALQGFKI 217
>gi|380012874|ref|XP_003690499.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Apis florea]
Length = 902
Score = 44.3 bits (103), Expect = 0.053, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V+GLP +TK E+ IF+ KEVR+V R G L +V+F + AA AL
Sbjct: 755 LFVKGLPVSTTKEELEEIFKVHGALKEVRIV----TYRNGHSKGLAYVEFMDENSAAKAL 810
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSV 246
A G ++ + K + + S+ P + V
Sbjct: 811 LATDGMKIAD-----KVISVAISQPPERKKV 836
>gi|344250312|gb|EGW06416.1| U1 small nuclear ribonucleoprotein A [Cricetulus griseus]
Length = 291
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 214 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 263
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 264 VQAGAARDALQGFKITQNN 282
>gi|148696478|gb|EDL28425.1| mCG19497, isoform CRA_b [Mus musculus]
Length = 203
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 116 AAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 166
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 167 -IAFVEFENDGQAGAARDALQGFKI 190
>gi|318065773|ref|NP_001187499.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus punctatus]
gi|308322301|gb|ADO28288.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus furcatus]
gi|308323171|gb|ADO28722.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus punctatus]
Length = 219
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + + FV+FE
Sbjct: 142 PPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPGKHD--------IAFVEFEGE 191
Query: 209 ACAATALSALQGYRM 223
A A A ALQG+R+
Sbjct: 192 AQAGVAKDALQGFRI 206
>gi|238883377|gb|EEQ47015.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 708
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI-------------- 199
+TLYV LP D+T+ E+ +F P G++ + K
Sbjct: 550 NTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQSSSNNGTGSGGGSGGGGGHSHGP 609
Query: 200 LCFVDFENPACAATALSALQGYRMDEDDPDSKF--LRLQFSRNPGPRSVFGARG 251
+CFV+FE+ A A AL+ L G + + + +RL FS+NP G RG
Sbjct: 610 MCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNP-----LGVRG 658
>gi|19075222|ref|NP_587722.1| RNA-binding protein Mde7 [Schizosaccharomyces pombe 972h-]
gi|74676013|sp|O59784.1|MDE7_SCHPO RecName: Full=RNA-binding protein mde7; AltName:
Full=Mei4-dependent protein 7
gi|2995369|emb|CAA18309.1| RNA-binding protein Mde7 [Schizosaccharomyces pombe]
Length = 761
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+T+YV L ++++ F GY+ RL K ++G P+ CFV+FE AA
Sbjct: 602 NTIYVGNLSNPDQEKKLRLAFSKEKGYR--RLCFK---IKGNSPM--CFVEFEEVCHAAK 654
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNP-GPRSV 246
A+ +QG + DD +RL +S+NP G RS
Sbjct: 655 AMEKMQGAAL--DDKIKGGIRLSYSKNPLGVRST 686
>gi|119630691|gb|EAX10286.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_b
[Homo sapiens]
Length = 242
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 148 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFEND 197
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 198 GQAGAARDALQGFKI 212
>gi|255637677|gb|ACU19162.1| unknown [Glycine max]
Length = 189
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TL+V GLP D RE+ ++FR G+ +L K G ++ F F N A
Sbjct: 21 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQSAMA 75
Query: 214 ALSALQGYRMD 224
AL AL G + D
Sbjct: 76 ALHALNGVKFD 86
>gi|225713086|gb|ACO12389.1| U1 small nuclear ribonucleoprotein A [Lepeophtheirus salmonis]
Length = 217
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
A PG PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 133 AVHPGEA----PPN--QILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVPNRHD------ 180
Query: 198 LILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN +A A +LQG+++
Sbjct: 181 --IAFVEFENEVQSAAARESLQGFKI 204
>gi|387018110|gb|AFJ51173.1| U1 small nuclear ribonucleoprotein A [Crotalus adamanteus]
Length = 281
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 253
Query: 209 ACAATALSALQGYRMDEDD 227
A A ALQG+++ +++
Sbjct: 254 VQAGAARDALQGFKITQNN 272
>gi|297834202|ref|XP_002884983.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
gi|297330823|gb|EFH61242.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
Length = 287
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPA 209
P A +TL+V GLP D RE+ ++FR G++ +L K G ++ F F +
Sbjct: 33 PGAINTLFVSGLPNDVKAREIHNLFRRRYGFESCQL-----KYTGRGDQVVAFATFTSHR 87
Query: 210 CAATALSALQGYRMD 224
A A++ L G + D
Sbjct: 88 FAMAAMNELNGVKFD 102
>gi|321254501|ref|XP_003193094.1| rRNA primary transcript binding protein [Cryptococcus gattii WM276]
gi|317459563|gb|ADV21307.1| rRNA primary transcript binding protein, putative [Cryptococcus
gattii WM276]
Length = 773
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 144 ETLPLPPD----ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI 199
E+LP PD A STL+++GL +T + + G+ R+ +K R G+ L
Sbjct: 525 ESLPEQPDPTDEAGSTLFLKGLNFATTTAHLQTVLSNIPGFSFARVQMKPDPKRPGEKLS 584
Query: 200 L--CFVDFENPACAATALSALQGYRMDEDDPDSKF 232
+ FV F+ A AL AL+G+ +D + + +F
Sbjct: 585 MGYGFVGFKTKEAATKALKALEGFEIDGKNLEVRF 619
>gi|119618222|gb|EAW97816.1| squamous cell carcinoma antigen recognised by T cells 3, isoform
CRA_a [Homo sapiens]
Length = 575
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 415 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 470
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSV 246
+ G + E+ +++ S NP R V
Sbjct: 471 MKMDGMTIKEN-----IIKVAIS-NPPQRKV 495
>gi|403281745|ref|XP_003932338.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3 [Saimiri boliviensis
boliviensis]
Length = 972
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 812 LFISGLPFSCTKEELEEICKAHGNVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 867
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSV 246
+ G + E+ +++ S NP R V
Sbjct: 868 MKMDGMTIKEN-----VIKVAIS-NPPQRKV 892
>gi|384486783|gb|EIE78963.1| hypothetical protein RO3G_03668 [Rhizopus delemar RA 99-880]
Length = 236
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 11/93 (11%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP +TLYV LP ++++ E++ +F GY+ R+ + +K +G +CFV+FE+
Sbjct: 132 PP--CNTLYVGNLPLNTSEEELSDLFSNREGYR--RMCFR-TKSQGP----MCFVEFEDI 182
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
A+ L+ LQG+ + +RL +S+NP
Sbjct: 183 PSASHTLNELQGHALTNSVKGG--IRLSYSKNP 213
>gi|307195443|gb|EFN77329.1| U2 small nuclear ribonucleoprotein B'' [Harpegnathos saltator]
Length = 231
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++++ ++ +F F G+KEVRLV + FV+FEN
Sbjct: 154 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD--------IAFVEFENE 203
Query: 209 ACAATALSALQGYRM 223
+ A ALQG+++
Sbjct: 204 VQSGAAKDALQGFKI 218
>gi|442760027|gb|JAA72172.1| Putative spliceosomal protein snrnp-u1a/u2b [Ixodes ricinus]
Length = 239
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 160 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 209
Query: 209 ACAATALSALQGYRM 223
++ A ALQG+++
Sbjct: 210 IQSSAAKEALQGFKI 224
>gi|451846216|gb|EMD59526.1| hypothetical protein COCSADRAFT_100727 [Cochliobolus sativus
ND90Pr]
Length = 828
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++TLYV L ++ + F+P G++ ++ K RG + FV+F +P A
Sbjct: 603 TATLYVRNLNFSTSTERLIEAFKPLSGFRSAKVKTKVDPKRGVLSMGFGFVEFNSPETAT 662
Query: 213 TALSALQGYRMD 224
AL A+ GY ++
Sbjct: 663 AALRAMDGYDLE 674
>gi|407925474|gb|EKG18485.1| hypothetical protein MPH_04287 [Macrophomina phaseolina MS6]
Length = 836
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFENPAC 210
+STLYV L +T + + +FRP G+ R+ K + G L + F++F
Sbjct: 606 TSTLYVRNLNFATTSQRLTEVFRPLDGFVSARVKTKTDPKKPGQVLSMGFGFLEFRTKEQ 665
Query: 211 AATALSALQGYRMD 224
A AL+A+ GY +D
Sbjct: 666 AQAALAAMDGYNLD 679
>gi|290562822|gb|ADD38806.1| U1 small nuclear ribonucleoprotein A [Lepeophtheirus salmonis]
Length = 217
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
A PG PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 133 AVHPGEA----PPN--QILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVPNRHD------ 180
Query: 198 LILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN +A A +LQG+++
Sbjct: 181 --IAFVEFENEVQSAAARGSLQGFKI 204
>gi|380024353|ref|XP_003695965.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Apis
florea]
Length = 231
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++++ ++ +F F G+KEVRLV + FV+FEN
Sbjct: 154 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD--------IAFVEFENE 203
Query: 209 ACAATALSALQGYRM 223
+ A ALQG+++
Sbjct: 204 VQSGAAKDALQGFKI 218
>gi|147902216|ref|NP_001085460.1| MGC80122 protein [Xenopus laevis]
gi|49257361|gb|AAH72799.1| MGC80122 protein [Xenopus laevis]
Length = 223
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 146 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 195
Query: 209 ACAATALSALQGYRM 223
A +A ALQG+++
Sbjct: 196 TEAGSARDALQGFKI 210
>gi|431894149|gb|ELK03949.1| U2 small nuclear ribonucleoprotein B'' [Pteropus alecto]
Length = 291
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 45/239 (18%)
Query: 15 PSGGMLKRPRSDYDLPPSEVLSRHDMHNYLSQDDDLGELQPLKDTSTIGSAYDRY-LQSA 73
P+ G L + D+ P+ + ++M++ + +++ L L S G D L++
Sbjct: 51 PASGYLNSLAQNMDIRPNHTIYINNMNDKIKKEELKRSLYAL--FSQFGHVVDIVALKTM 108
Query: 74 QY--SSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSSID- 130
+ +F + S + LR+ + P + ++ T D++ +R + D
Sbjct: 109 KMRGQAFVIFKELGSSTNALRQ-----LQGFPFYGKPMRIQYAKTDSDIISKMRGTFADK 163
Query: 131 ------------DQLPFDAAARPGHET------------LPLPPDA--SSTLYVEGLPAD 164
+Q A +PG T P PD + L++ LP +
Sbjct: 164 EKKKEKKKAKTVEQTAMTANKKPGQGTPNSANTQGNVTPNPQVPDYPPNYILFLNNLPEE 223
Query: 165 STKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRM 223
+ + ++ +F F G+KEVRLV + FV+FEN A A ALQG+++
Sbjct: 224 TNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENDGQAGAARDALQGFKI 274
>gi|321471820|gb|EFX82792.1| hypothetical protein DAPPUDRAFT_302363 [Daphnia pulex]
Length = 841
Score = 43.9 bits (102), Expect = 0.063, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+++GL +TK ++ +F+ F K+VRLV R G P L +V+FE+ A AL
Sbjct: 698 LFIKGLALSTTKEDLEALFKKFGILKDVRLV----TFRNGSPKGLAYVEFEDEVSATMAL 753
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPR 244
+ G + K L + S NP PR
Sbjct: 754 NQTDGTTFQD-----KVLTVALS-NPPPR 776
>gi|402579243|gb|EJW73195.1| hypothetical protein WUBG_15898, partial [Wuchereria bancrofti]
Length = 419
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ +RE+ +FR GY+ L I +SK GG + FV F + A A
Sbjct: 40 TLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSK-DGGIASPVGFVTFSSAEDAEIA 98
Query: 215 LSALQGYRMD 224
+ ALQ D
Sbjct: 99 MKALQSALFD 108
>gi|341895190|gb|EGT51125.1| CBN-MEC-8 protein [Caenorhabditis brenneri]
gi|341898355|gb|EGT54290.1| hypothetical protein CAEBREN_29517 [Caenorhabditis brenneri]
Length = 313
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
A STL+V L A+ + ++ +F+ F G+ +RL K + FV++ + A
Sbjct: 227 ACSTLFVANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGS-------CVAFVEYSDLQKA 279
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A+ +LQG+++ +D LR++++RN
Sbjct: 280 TQAMMSLQGFQVSANDRGG--LRIEYARN 306
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPA 209
P TL+V GLP D+ RE+ +FR GY+ L + + P + FV F
Sbjct: 27 PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSP--VGFVTFLTQQ 84
Query: 210 CAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A A LQG R D + ++ LRL+ +++
Sbjct: 85 DAQDAKKLLQGVRFDPE--CAQVLRLELAKS 113
>gi|326474597|gb|EGD98606.1| pre-rRNA processing protein Mrd1 [Trichophyton tonsurans CBS
112818]
Length = 798
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCF--VD 204
P P S+TL+V L +T ++ +FRP G+ ++ + + G+ L + F V+
Sbjct: 565 PEAPMESATLFVRNLNFTTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVE 624
Query: 205 FENPACAATALSALQGYRMDE 225
F+ A A AL AL GY++D+
Sbjct: 625 FKGRAQAEAALKALNGYKLDQ 645
>gi|58331942|ref|NP_001011120.1| small nuclear ribonucleoprotein polypeptide B [Xenopus (Silurana)
tropicalis]
gi|54038268|gb|AAH84519.1| hypothetical LOC496533 [Xenopus (Silurana) tropicalis]
gi|89268683|emb|CAJ82680.1| small nuclear ribonucleoprotein polypeptide B [Xenopus (Silurana)
tropicalis]
Length = 223
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 146 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 195
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 196 TEAGAARDALQGFKI 210
>gi|448537570|ref|XP_003871360.1| Whi3 RNA binding protein [Candida orthopsilosis Co 90-125]
gi|380355717|emb|CCG25235.1| Whi3 RNA binding protein [Candida orthopsilosis]
Length = 770
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 24/117 (20%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI-------------- 199
+TLYV LP D+T+ E+ +F P G++ + K
Sbjct: 591 NTLYVGNLPPDATEAELRTLFAPQKGFRRLSFRTKNQTNNSTGGSTSTTSTATNSSGHNH 650
Query: 200 --LCFVDFENPACAATALSALQGY---RMDEDDPDSKFLRLQFSRNPGPRSVFGARG 251
+CFV+FE+ A A AL+ L G R + +RL FS+NP G RG
Sbjct: 651 GPMCFVEFEDVAHATRALAELYGRTLPRPHAGNNGKGGIRLSFSKNP-----LGVRG 702
>gi|308494202|ref|XP_003109290.1| CRE-MEC-8 protein [Caenorhabditis remanei]
gi|308246703|gb|EFO90655.1| CRE-MEC-8 protein [Caenorhabditis remanei]
Length = 305
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
A STL+V L A+ + ++ +F+ F G+ +RL K + FV++ + A
Sbjct: 219 ACSTLFVANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGS-------CVAFVEYSDLHKA 271
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A+ +LQG+++ +D LR++++RN
Sbjct: 272 TQAMMSLQGFQVSANDRGG--LRIEYARN 298
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPA 209
P TL+V GLP D+ RE+ +FR GY+ L + + P + FV F
Sbjct: 27 PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSP--VGFVTFLTQQ 84
Query: 210 CAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A A LQG R D + ++ LRL+ +++
Sbjct: 85 DAQDARKMLQGVRFDPE--CAQVLRLELAKS 113
>gi|340517170|gb|EGR47415.1| predicted protein [Trichoderma reesei QM6a]
Length = 797
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFE 206
PP +++L+V L +T +A IF P G+ R+ K R G L + FV+F
Sbjct: 563 PPAETASLFVRNLNFATTTNRLAEIFEPLDGFVSARVKTKIDPKRPGQTLSMGFGFVEFR 622
Query: 207 NPACAATALSALQGYRMD 224
+ A AL A+ GY +D
Sbjct: 623 SKDQAQAALKAMDGYVLD 640
>gi|340726396|ref|XP_003401545.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Bombus
terrestris]
gi|350423999|ref|XP_003493658.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Bombus
impatiens]
Length = 233
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++++ ++ +F F G+KEVRLV + FV+FEN
Sbjct: 156 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD--------IAFVEFENE 205
Query: 209 ACAATALSALQGYRM 223
+ A ALQG+++
Sbjct: 206 VQSGAAKDALQGFKI 220
>gi|270047496|ref|NP_001161808.1| U1 small nuclear ribonucleoprotein A [Apis mellifera]
Length = 231
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++++ ++ +F F G+KEVRLV + FV+FEN
Sbjct: 154 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD--------IAFVEFENE 203
Query: 209 ACAATALSALQGYRM 223
+ A ALQG+++
Sbjct: 204 VQSGAAKDALQGFKI 218
>gi|327289491|ref|XP_003229458.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Anolis carolinensis]
Length = 905
Score = 43.9 bits (102), Expect = 0.069, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ + + KEVRLV R G + +V+FEN A A+ A+
Sbjct: 751 LFIAGLPFSYTKEELEELCKAHGTVKEVRLVTN----RAGRSKGMAYVEFENEAQASQAV 806
Query: 216 SALQGYRMDE-------DDPDSKFLRLQFSRNPG-PRSVFGARGR 252
+ G +++ +P ++ R P PR +GARG+
Sbjct: 807 LKMDGLAVNDYVIKVAISNPPARKQPEAAERAPQPPRQSYGARGK 851
>gi|307190556|gb|EFN74543.1| U1 small nuclear ribonucleoprotein A [Camponotus floridanus]
Length = 184
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++++ ++ +F F G+KEVRLV + FV+FEN
Sbjct: 107 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD--------IAFVEFENE 156
Query: 209 ACAATALSALQGYRM 223
+ A ALQG+++
Sbjct: 157 VQSGAAKDALQGFKI 171
>gi|118485733|gb|ABK94716.1| unknown [Populus trichocarpa]
Length = 254
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 21/121 (17%)
Query: 107 PSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADST 166
P+ G +G T P L+Q +P+ + P PP+ + L+++ LP ++T
Sbjct: 146 PAYGGAYGTT-PSLLQ----------IPYPGGVKSMVPEAPAPPN--NILFIQNLPNETT 192
Query: 167 KREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDED 226
+ +F+ + G+KEVR+V E+K P I FV++ + + A+ LQG+++ +
Sbjct: 193 PMMLQMLFQQYPGFKEVRMV--EAK-----PGI-AFVEYGDEMQSTGAMHGLQGFKILQQ 244
Query: 227 D 227
+
Sbjct: 245 N 245
>gi|58265434|ref|XP_569873.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|134109003|ref|XP_776616.1| hypothetical protein CNBC1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818289|sp|P0CR17.1|MRD1_CRYNB RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|338818290|sp|P0CR16.1|MRD1_CRYNJ RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|50259296|gb|EAL21969.1| hypothetical protein CNBC1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226105|gb|AAW42566.1| rRNA primary transcript binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 769
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 144 ETLPLPPD----ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI 199
E+LP PD A STL+++GL +T + + G+ R+ +K R G+ L
Sbjct: 521 ESLPEQPDPTDEAGSTLFLKGLNFTTTTPHLQTVLSHIPGFSFARVQMKPDPKRPGEKLS 580
Query: 200 L--CFVDFENPACAATALSALQGYRMDEDDPDSKF 232
+ FV F+ A AL AL+G+ +D + KF
Sbjct: 581 MGYGFVGFKTKEAATKALKALEGFEIDGKSLEVKF 615
>gi|383847977|ref|XP_003699629.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Megachile
rotundata]
Length = 231
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++++ ++ +F F G+KEVRLV + FV+FEN
Sbjct: 154 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD--------IAFVEFENE 203
Query: 209 ACAATALSALQGYRM 223
+ A ALQG+++
Sbjct: 204 VQSGAAKDALQGFKI 218
>gi|346473641|gb|AEO36665.1| hypothetical protein [Amblyomma maculatum]
Length = 183
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 106 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 155
Query: 209 ACAATALSALQGYRM 223
++ A ALQG+++
Sbjct: 156 IQSSAAKEALQGFKI 170
>gi|332022263|gb|EGI62578.1| U2 small nuclear ribonucleoprotein B'' [Acromyrmex echinatior]
Length = 184
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++++ ++ +F F G+KEVRLV + FV+FEN
Sbjct: 107 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD--------IAFVEFENE 156
Query: 209 ACAATALSALQGYRM 223
+ A ALQG+++
Sbjct: 157 VQSGAAKDALQGFKI 171
>gi|170583984|ref|XP_001896809.1| RNA binding protein [Brugia malayi]
gi|158595852|gb|EDP34335.1| RNA binding protein, putative [Brugia malayi]
Length = 367
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ +RE+ +FR GY+ L I +SK GG + FV F + A A
Sbjct: 40 TLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSK-DGGIASPVGFVTFSSAEDAEIA 98
Query: 215 LSALQGYRMD 224
+ ALQ D
Sbjct: 99 MKALQSALFD 108
>gi|410909848|ref|XP_003968402.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 2
[Takifugu rubripes]
Length = 279
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 202 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 251
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A A ALQG+++ + S +++ F++
Sbjct: 252 VQAGAARDALQGFKITQ----SNAMKISFAK 278
>gi|322797045|gb|EFZ19352.1| hypothetical protein SINV_13322 [Solenopsis invicta]
Length = 152
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++++ ++ +F F G+KEVRLV + FV+FEN
Sbjct: 75 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD--------IAFVEFENE 124
Query: 209 ACAATALSALQGYRM 223
+ A ALQG+++
Sbjct: 125 VQSGAAKDALQGFKI 139
>gi|315041593|ref|XP_003170173.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
gi|311345207|gb|EFR04410.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
Length = 799
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCF--VD 204
P P S+TL+V L +T ++ +FRP G+ ++ + + G+ L + F V+
Sbjct: 566 PEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVE 625
Query: 205 FENPACAATALSALQGYRMDE 225
F++ A A AL AL GY++D+
Sbjct: 626 FKSRAQAEAALKALNGYKLDQ 646
>gi|328783037|ref|XP_394225.4| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Apis mellifera]
Length = 910
Score = 43.5 bits (101), Expect = 0.077, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V+GLP +TK ++ IF+ KEVR+V R G L +++F++ AA AL
Sbjct: 760 LFVKGLPVSTTKEDLEEIFKVHGALKEVRIV----TYRNGHSKGLAYIEFKDENSAAKAL 815
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSV 246
A G ++ + K + + S+ P + V
Sbjct: 816 LATDGMKIAD-----KIISVAISQPPERKKV 841
>gi|431894111|gb|ELK03912.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Pteropus
alecto]
Length = 981
Score = 43.5 bits (101), Expect = 0.079, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 17/110 (15%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + +++RLV R G P L +V++EN + A+ A+
Sbjct: 821 LFISGLPFSCTKEELEEICKAHGTVRDIRLVTN----RAGKPKGLAYVEYENESQASQAV 876
Query: 216 SALQGYRMDED-------DPDSKFLRLQFSRNPGP------RSVFGARGR 252
+ G + E+ +P + + + GP R ++GARG+
Sbjct: 877 MKMDGMTIKENVIKVAISNPPQRKVPEKPEAKKGPGGPMVLRQIYGARGK 926
>gi|62857647|ref|NP_001016784.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
gi|60618430|gb|AAH90598.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
gi|89273875|emb|CAJ82017.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
Length = 282
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A +LQG+++ + +
Sbjct: 255 VQAGAARESLQGFKITQSN 273
>gi|255553401|ref|XP_002517742.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
gi|223543140|gb|EEF44674.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
Length = 233
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 134 PFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLR 193
PF R E P ++ L+++ LP ++T + +F+ + G++EVR++ E+K
Sbjct: 143 PFRQGNRGEQEAAP----PNNILFIQNLPHETTSMMLQVLFQQYPGFREVRMI--EAK-- 194
Query: 194 GGDPLILCFVDFENPACAATALSALQGYRMDEDDP 228
P I FV+FE+ ++ A+ ALQ +++ +P
Sbjct: 195 ---PGI-AFVEFEDDVQSSMAMQALQSFKITPQNP 225
>gi|1050840|emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]
Length = 253
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+S L+V+ LP ST + +F + G+KEVR++ E+K P I F+++ + +
Sbjct: 178 NSILFVQNLPHQSTPMMLQMLFCQYPGFKEVRMI--EAK-----PGI-AFIEYGDEMQST 229
Query: 213 TALSALQGYRMDEDDP 228
A+ ALQG+++ ++P
Sbjct: 230 VAMQALQGFKITAENP 245
>gi|148222234|ref|NP_001080089.1| U1 small nuclear ribonucleoprotein A [Xenopus laevis]
gi|27924189|gb|AAH44979.1| Snf protein [Xenopus laevis]
Length = 282
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A +LQG+++ + +
Sbjct: 255 VQAGAARESLQGFKITQSN 273
>gi|1173326|sp|P45429.1|SNRPA_XENLA RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|65181|emb|CAA41021.1| U1 A protein [Xenopus laevis]
Length = 282
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A +LQG+++ + +
Sbjct: 255 VQAGAARESLQGFKITQSN 273
>gi|327298413|ref|XP_003233900.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
gi|326464078|gb|EGD89531.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
Length = 798
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCF--VD 204
P P S+TL+V L +T ++ +FRP G+ ++ + + G+ L + F V+
Sbjct: 565 PEAPMESATLFVRNLNFVTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVE 624
Query: 205 FENPACAATALSALQGYRMDE 225
F++ A A AL AL GY++D+
Sbjct: 625 FKSRAQAEAALKALNGYKLDQ 645
>gi|291234607|ref|XP_002737237.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Saccoglossus
kowalevskii]
Length = 249
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ + L++ LP ++ + + +F F +KEVRLV + FV+FEN
Sbjct: 172 PPN--NILFLTNLPEETNEMMLQMLFNQFQAFKEVRLVPGRHD--------IAFVEFENE 221
Query: 209 ACAATALSALQGYRM 223
A A ALQG+++
Sbjct: 222 TQAGVAKDALQGFKI 236
>gi|19347861|gb|AAL85989.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
Length = 228
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 49/87 (56%), Gaps = 12/87 (13%)
Query: 142 GHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILC 201
G +T+P ++ L++ LP ++ + +F + G+KE+R++ + + G +
Sbjct: 146 GQDTMP----PNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMI----EAKPG----IA 193
Query: 202 FVDFENPACAATALSALQGYRMDEDDP 228
FV++E+ ++ A+ ALQG+++ +P
Sbjct: 194 FVEYEDDVQSSMAMQALQGFKITPRNP 220
>gi|348528531|ref|XP_003451770.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Oreochromis niloticus]
Length = 948
Score = 43.5 bits (101), Expect = 0.084, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+++ GLP TK ++A I + KEVRLV R G P L +V+F + A+ A+
Sbjct: 786 IFISGLPFSCTKEQLAEICKNHGTVKEVRLV----TYRSGKPKGLAYVEFADETQASQAV 841
Query: 216 SALQGYRMDEDDPD---SKFLRLQFSRNPG---------PRSVFGARGR 252
L G ++ + S R + PG PR V+GARG+
Sbjct: 842 LKLDGIEVEGNKISVAISNPPRRNATDKPGSSRPTGDAMPRQVYGARGK 890
>gi|213510744|ref|NP_001134742.1| U1 small nuclear ribonucleoprotein A [Salmo salar]
gi|209735590|gb|ACI68664.1| U1 small nuclear ribonucleoprotein A [Salmo salar]
Length = 281
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDND 253
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A A ALQG+++ + + +++ F++
Sbjct: 254 VQAGAAREALQGFKITQTNA----MKISFAK 280
>gi|224128458|ref|XP_002320337.1| predicted protein [Populus trichocarpa]
gi|222861110|gb|EEE98652.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 21/121 (17%)
Query: 107 PSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADST 166
P+ G +G T P L+Q +P+ + P PP+ + L+++ LP ++T
Sbjct: 123 PAYGGAYGTT-PSLLQ----------IPYPGGVKSMVPEAPAPPN--NILFIQNLPNETT 169
Query: 167 KREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDED 226
+ +F+ + G+KEVR+V E+K P I FV++ + + A+ LQG+++ +
Sbjct: 170 PMMLQMLFQQYPGFKEVRMV--EAK-----PGI-AFVEYGDEMQSTGAMHGLQGFKILQQ 221
Query: 227 D 227
+
Sbjct: 222 N 222
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LPAD +EV IF + IK ++ G F++FE+ A A+
Sbjct: 10 VYVGNLPADVRDKEVEDIFHKY-------GRIKYIDVKSGRGPAFAFIEFEDNRDAEDAV 62
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPR 244
A GY D + +R++F+R GPR
Sbjct: 63 RARDGYEF-----DGRRIRVEFTRGVGPR 86
>gi|405118918|gb|AFR93691.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 752
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 144 ETLPLPPD----ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI 199
E+LP PD A STL+++GL +T + + G+ R+ +K R G+ L
Sbjct: 504 ESLPEQPDPTDEAGSTLFLKGLNFATTTPHLQTVLSHIPGFSFARVQMKPDPKRPGEKLS 563
Query: 200 L--CFVDFENPACAATALSALQGYRMDEDDPDSKF 232
+ FV F+ A AL AL+G+ +D + KF
Sbjct: 564 MGYGFVGFKTKEAATKALKALEGFEIDGKSLEVKF 598
>gi|226443332|ref|NP_001139849.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
gi|221219334|gb|ACM08328.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
Length = 219
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + + FV+FE+
Sbjct: 142 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGKHD--------ISFVEFESE 191
Query: 209 ACAATALSALQGYRM 223
A A ALQG+R+
Sbjct: 192 GQAGVAKDALQGFRI 206
>gi|425442381|ref|ZP_18822630.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
gi|389716645|emb|CCH99152.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
Length = 98
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVI-KESKLRGGDPLILCFVDFENPACAAT 213
++YV LP + + +V +F+ + K V L + +E+K + G FV+ E P A
Sbjct: 2 SIYVGNLPFEVDQEDVVEVFKEYGEIKRVHLPMDRETKRKRG----FAFVEMETPEQEAK 57
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
A++AL G + + L++ +R PRS FGA G R
Sbjct: 58 AIAALDGAQW-----MGRELKVNQAREKEPRSSFGAGGDR 92
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D +++ +F YK ++ + K R G P FV+F++P A A+
Sbjct: 11 IYVGNLPPDIRTKDIQDLF-----YKFGKVTFVDLKNRRGPPF--AFVEFDDPRDAEDAV 63
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVF-GARG 251
A GY D D LR++F R GP + F G RG
Sbjct: 64 HARDGY-----DYDGYRLRVEFPRGGGPSNNFRGGRG 95
>gi|197101013|ref|NP_001124858.1| squamous cell carcinoma antigen recognized by T-cells 3 [Pongo
abelii]
gi|75070943|sp|Q5REG1.1|SART3_PONAB RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3
gi|55726145|emb|CAH89846.1| hypothetical protein [Pongo abelii]
Length = 981
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 821 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 876
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSV 246
+ G + E+ +++ S NP R V
Sbjct: 877 MKMDGMTIKEN-----VIKVAIS-NPPQRKV 901
>gi|223649102|gb|ACN11309.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
Length = 219
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + + FV+FE+
Sbjct: 142 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGKHD--------ISFVEFESE 191
Query: 209 ACAATALSALQGYRM 223
A A ALQG+R+
Sbjct: 192 GQAGVAKDALQGFRI 206
>gi|126723082|ref|NP_001075629.1| nuclear ribonucleoprotein A [Oryctolagus cuniculus]
gi|38641409|gb|AAR26269.1| nuclear ribonucleoprotein A [Oryctolagus cuniculus]
Length = 282
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A +LQG+++ +++
Sbjct: 255 VQAGAARDSLQGFKITQNN 273
>gi|356526031|ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max]
Length = 264
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TL+V GLP D RE+ ++FR G+ +L K G ++ F F N A
Sbjct: 21 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQSAMA 75
Query: 214 ALSALQGYRMD 224
AL AL G + D
Sbjct: 76 ALHALNGVKFD 86
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
STL++ L + T+ E+ F + G+ V++ + RGG P+ FVDFE AA
Sbjct: 182 STLFIANLGPNCTEDELKQAFSAYTGFNMVKM-----RSRGGMPV--AFVDFEETHQAAK 234
Query: 214 ALSALQG 220
+ LQG
Sbjct: 235 VMEELQG 241
>gi|405952772|gb|EKC20544.1| Protein couch potato [Crassostrea gigas]
Length = 318
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 9/87 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
STL+V L S+++E+ +F F G+ +R+ K GG P+ FV+F++ AA
Sbjct: 217 STLFVANLGQFSSEQELKDLFNSFQGFSRLRMHNK-----GGSPV--AFVEFQDVRQAAE 269
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRN 240
A+ LQG+ + D +R+++++N
Sbjct: 270 AMGRLQGFVLLSSDRGG--IRIEYAKN 294
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 164 DSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRM 223
D+ RE+ +FR + GY+ L + + P+ FV F + + A A LQG R
Sbjct: 2 DAKPRELYLLFRAYKGYEGSLLKVTNKNGKNTSPV--GFVTFSSRSAAEAAKQDLQGVRF 59
Query: 224 DEDDPDSKFLRLQFSRN 240
D D P + LRL+F+++
Sbjct: 60 DPDLPQT--LRLEFAKS 74
>gi|302507734|ref|XP_003015828.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
gi|291179396|gb|EFE35183.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
Length = 826
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCF--VD 204
P P S+TL+V L +T ++ +FRP G+ ++ + + G+ L + F V+
Sbjct: 593 PEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVE 652
Query: 205 FENPACAATALSALQGYRMDEDD 227
F++ A A AL AL GY++D+ +
Sbjct: 653 FKSRAQAEAALKALNGYKLDQHE 675
>gi|260827881|ref|XP_002608892.1| hypothetical protein BRAFLDRAFT_124249 [Branchiostoma floridae]
gi|229294246|gb|EEN64902.1| hypothetical protein BRAFLDRAFT_124249 [Branchiostoma floridae]
Length = 256
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++ L++ LP ++T+ ++ +F F G+KEVRLV + FV+F+N +
Sbjct: 181 NNILFLTNLPEETTEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNEMQSG 232
Query: 213 TALSALQGYRM 223
A ALQG+++
Sbjct: 233 AARDALQGFKI 243
>gi|378731298|gb|EHY57757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 763
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 116 TGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFR 175
T P +V++ S +D+ DA AR G P+A L++ LP D+ + ++ F
Sbjct: 212 TVPHVVEDAAGS--EDKANSDAEARTGSTATVSIPNAR--LFIRNLPFDAKEGDLRKTFA 267
Query: 176 PFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQG 220
PF EV +V KL G L +V F PA A AL L G
Sbjct: 268 PFGRVSEVHIVTDTRKLTGKG---LAYVQFVEPADAEKALLELDG 309
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 142 GHETLPLPPDASS-------TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRG 194
G +T +P DA S T++V L +T ++ F+P G+ R+ + R
Sbjct: 515 GTQTQQVPEDAESKTLGSTFTVFVRNLNFSTTTARLSEAFKPLSGFLSARVKTRTDAKRP 574
Query: 195 GDPLILCF--VDFENPACAATALSALQGYRMD 224
G+ L + F V+F A A A++ + G R+D
Sbjct: 575 GEILSMGFGFVEFRTRAQAEAAIATMNGRRLD 606
>gi|403221977|dbj|BAM40109.1| U1/2 small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 206
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
+ S TL+VE +P+D +K + +FR + G+K R + + + FVD+
Sbjct: 131 EESHTLFVENIPSDMSKDSLELLFRQYPGFKNCRFI---------EGRYVAFVDYSMATQ 181
Query: 211 AATALSALQGYRM 223
A AL LQG+R+
Sbjct: 182 AEIALEGLQGFRV 194
>gi|115466456|ref|NP_001056827.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|55296621|dbj|BAD69323.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|55297274|dbj|BAD69059.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113594867|dbj|BAF18741.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|215697009|dbj|BAG91003.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ ++F G+ L E RG ++ FV F N A +A
Sbjct: 33 TLFVAGLPDDVKPREIHNLFSSRPGFDHCLL---EYTGRGNQ--VVAFVSFVNHQAALSA 87
Query: 215 LSALQGYRMDEDDPDSKFLRL 235
+SAL G D D D + L
Sbjct: 88 MSALNGTVFDPDTGDRLHIEL 108
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 19/123 (15%)
Query: 118 PDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPF 177
P L Q+ S DDQ P + +PP STL+V L T+ E+ +
Sbjct: 192 PGLKQHRGQSLSDDQ--------PDKLSSDIPP--CSTLFVANLGHSCTEEELKEVLSKQ 241
Query: 178 VGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQF 237
G+ +++ + RGG P+ F DF + + A+ ALQG + D D L++++
Sbjct: 242 PGFHLLKM-----RRRGGMPV--AFADFTDIESSTAAMDALQGTVLASSDADG--LQIEY 292
Query: 238 SRN 240
+R+
Sbjct: 293 ARS 295
>gi|426246411|ref|XP_004016988.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Ovis aries]
Length = 225
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 138 ATPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 188
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A ALQG+++
Sbjct: 189 -IAFVEFENDGQAGAGRDALQGFKI 212
>gi|67516279|ref|XP_658025.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|74681510|sp|Q5BGA9.1|MRD1_EMENI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|40747364|gb|EAA66520.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|259489335|tpe|CBF89520.1| TPA: Multiple RNA-binding domain-containing protein 1
[Source:UniProtKB/Swiss-Prot;Acc:Q5BGA9] [Aspergillus
nidulans FGSC A4]
Length = 819
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFENPA 209
A++TL+++ L +T + + FRP G+ R+ K G L + F DF+ A
Sbjct: 590 ATATLFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADFKTKA 649
Query: 210 CAATALSALQGYRMD 224
A AL+ + GY +D
Sbjct: 650 QAQAALAVMNGYTLD 664
>gi|225442319|ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263499 [Vitis vinifera]
gi|297743102|emb|CBI35969.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TL+V GLP D RE+ ++FR G+ +L K G ++ F F N A
Sbjct: 21 NTLFVSGLPDDVKPREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFFNHQTAVA 75
Query: 214 ALSALQGYRMD 224
AL AL G + D
Sbjct: 76 ALHALNGVKFD 86
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP STL++ L T+ E+ + + G+ +++ + +GG P+ F DFE
Sbjct: 186 LPP--CSTLFIANLGPTCTEDELKQVLSQYPGFNVLKM-----RAKGGMPV--AFADFEE 236
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A A+ ALQG + D + L+++R
Sbjct: 237 IEQANKAMDALQGSMLASSDRGG--MHLEYAR 266
>gi|186510039|ref|NP_001118622.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449895|dbj|BAC42069.1| unknown protein [Arabidopsis thaliana]
gi|332641880|gb|AEE75401.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 287
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 146 LPL---PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCF 202
LPL P A +TL+V GLP D RE+ ++FR G++ +L K G ++ F
Sbjct: 26 LPLLADEPGAINTLFVSGLPNDVKAREIHNLFRRRHGFESCQL-----KYTGRGDQVVAF 80
Query: 203 VDFENPACAATALSALQGYRMD 224
F + A A++ L G + D
Sbjct: 81 ATFTSHRFALAAMNELNGVKFD 102
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D +++ +F YK ++ + K R G P FV+F++P A A+
Sbjct: 12 IYVGNLPPDIRTKDIQDLF-----YKFGKVTFVDLKNRRGPPF--AFVEFDDPRDAEDAV 64
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVF-GARG 251
A GY D D LR++F R GP + F G RG
Sbjct: 65 HARDGY-----DYDGYRLRVEFPRGGGPSNNFRGGRG 96
>gi|357621621|gb|EHJ73396.1| U1 small nuclear ribonucleoprotein A [Danaus plexippus]
Length = 220
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++++ ++ +F F G+KEVRLV + FV+F N
Sbjct: 143 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD--------IAFVEFANE 192
Query: 209 ACAATALSALQGYRM 223
+A A ALQG+++
Sbjct: 193 MQSAAAKEALQGFKI 207
>gi|302660785|ref|XP_003022068.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
gi|291185995|gb|EFE41450.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
Length = 968
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCF--VD 204
P P S+TL+V L +T ++ +FRP G+ ++ + + G+ L + F V+
Sbjct: 735 PEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVE 794
Query: 205 FENPACAATALSALQGYRMDEDD 227
F++ A A AL AL GY++D+ +
Sbjct: 795 FKSRAQAEAALKALNGYKLDQHE 817
>gi|45188056|ref|NP_984279.1| ADR183Cp [Ashbya gossypii ATCC 10895]
gi|44982873|gb|AAS52103.1| ADR183Cp [Ashbya gossypii ATCC 10895]
Length = 320
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
+++ L+V+ P D + E+ IF P+ KEV+L+ FV+FE P A
Sbjct: 35 STTRLHVKPFPPDVEEHELDEIFSPYGALKEVKLMSG-----------FAFVEFEKPESA 83
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSRNPGPR 244
A+ + G +M D P L + +SR P PR
Sbjct: 84 EQAIKDVNG-KMFADMP----LTVSYSRMPMPR 111
>gi|374107494|gb|AEY96402.1| FADR183Cp [Ashbya gossypii FDAG1]
Length = 320
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
+++ L+V+ P D + E+ IF P+ KEV+L+ FV+FE P A
Sbjct: 35 STTRLHVKPFPPDVEEHELDEIFSPYGALKEVKLMSG-----------FAFVEFEKPESA 83
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSRNPGPR 244
A+ + G +M D P L + +SR P PR
Sbjct: 84 EQAIKDVNG-KMFADMP----LTVSYSRMPMPR 111
>gi|242247219|ref|NP_001156146.1| U1 small nuclear ribonucleoprotein A-like [Acyrthosiphon pisum]
gi|239790514|dbj|BAH71814.1| ACYPI003668 [Acyrthosiphon pisum]
Length = 224
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++T+ ++ +F F G+KEVRLV + FV+FEN
Sbjct: 147 PPN--QILFLTNLPDETTEMMLSMLFNQFPGFKEVRLVPNRHD--------IAFVEFENE 196
Query: 209 ACAATALSALQGYRM 223
+ TA +L G+++
Sbjct: 197 HQSNTAKLSLNGFKI 211
>gi|390354851|ref|XP_793863.3| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like, partial [Strongylocentrotus purpuratus]
Length = 547
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+ L+V GLP T E+ F F K VR+V + G P L +VDFEN A A
Sbjct: 441 NKLFVSGLPRTLTTEELEKTFSKFGKLKGVRIVT----FKSGVPKGLAYVDFENEASATR 496
Query: 214 ALSALQGYRMDE 225
A+ L ++ E
Sbjct: 497 AVMGLDNTQIGE 508
>gi|432953883|ref|XP_004085463.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Oryzias latipes]
Length = 217
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + + FV+FE+
Sbjct: 140 PPN--HILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGKHD--------IAFVEFESD 189
Query: 209 ACAATALSALQGYRM 223
A A ALQG+R+
Sbjct: 190 TQAGVAKDALQGFRI 204
>gi|17508419|ref|NP_492508.1| Protein MEC-8 [Caenorhabditis elegans]
gi|1369981|emb|CAA64867.1| mec-8 [Caenorhabditis elegans]
gi|3877217|emb|CAB03111.1| Protein MEC-8 [Caenorhabditis elegans]
Length = 312
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
A STL+V L A+ + + +F+ F G+ +RL K + FV++ + A
Sbjct: 226 ACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGS-------CVAFVEYSDLQKA 278
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A+ +LQG+++ +D LR++++RN
Sbjct: 279 TQAMISLQGFQITANDRGG--LRIEYARN 305
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPA 209
P TL+V GLP D+ RE+ +FR GY+ L + + P + FV F +
Sbjct: 27 PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSP--VGFVTFLSQQ 84
Query: 210 CAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A A LQG R D + ++ LRL+ +++
Sbjct: 85 DAQDARKMLQGVRFDPE--CAQVLRLELAKS 113
>gi|1370048|emb|CAA64866.1| mec-8 [Caenorhabditis elegans]
Length = 312
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
A STL+V L A+ + + +F+ F G+ +RL K + FV++ + A
Sbjct: 226 ACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGS-------CVAFVEYSDLQKA 278
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A+ +LQG+++ +D LR++++RN
Sbjct: 279 TQAMISLQGFQITANDRGG--LRIEYARN 305
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPA 209
P TL+V GLP D+ RE+ +FR GY+ L + + P + FV F +
Sbjct: 27 PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSP--VGFVTFLSQQ 84
Query: 210 CAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A A LQG R D + ++ LRL+ +++
Sbjct: 85 DAQDARKMLQGVRFDPE--CAQVLRLELAKS 113
>gi|145343730|ref|XP_001416465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576690|gb|ABO94758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 220
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 11/78 (14%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP S+ + V+GLP +T +A +F+ F GYK+ + +ES GD V+F+
Sbjct: 146 PP--STRIAVQGLPGATTTHMLALLFQQFSGYKDATMT-RES----GD----GEVEFDTT 194
Query: 209 ACAATALSALQGYRMDED 226
A A AL+ LQG+R++ +
Sbjct: 195 ANAVAALNGLQGFRLNAN 212
>gi|354544405|emb|CCE41128.1| hypothetical protein CPAR2_301170 [Candida parapsilosis]
Length = 776
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 28/121 (23%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLI-------------- 199
+TLYV LP D+T+ E+ +F+P G++ + K S
Sbjct: 591 NTLYVGNLPPDATEAELRALFQPQKGFRRLSFRTKNSTNNNTGSSTSTSTSTGSGSSNSS 650
Query: 200 ------LCFVDFENPACAATALSALQGY---RMDEDDPDSKFLRLQFSRNPGPRSVFGAR 250
+CFV+FE+ A A AL+ L G R + +RL FS+NP G R
Sbjct: 651 GHNHGPMCFVEFEDVAHATRALAELYGRTLPRPHVGNSGKGGIRLSFSKNP-----LGVR 705
Query: 251 G 251
G
Sbjct: 706 G 706
>gi|363814370|ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycine max]
gi|255636681|gb|ACU18677.1| unknown [Glycine max]
Length = 265
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TL+V GLP D RE+ ++FR G+ +L K G ++ F F N A
Sbjct: 22 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQSAMA 76
Query: 214 ALSALQGYRMD 224
AL AL G + D
Sbjct: 77 ALHALNGVKFD 87
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
STL++ L + T+ E+ F + G+ V++ + RGG P+ FVDFE AA
Sbjct: 183 STLFIANLGPNCTEDELKQAFSVYTGFNMVKM-----RSRGGMPV--AFVDFEETDQAAK 235
Query: 214 ALSALQG 220
+ LQG
Sbjct: 236 VVEELQG 242
>gi|313231469|emb|CBY08583.1| unnamed protein product [Oikopleura dioica]
Length = 337
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 126 SSSIDDQLPFDAAA----RPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYK 181
SSS DD L + A R G+ D TLY+ GLP D RE+ ++F+ ++
Sbjct: 92 SSSEDDHLLLEVKAQERPRGGNSE-----DGVRTLYIAGLPCDVKHREIRNLFQHIPEFE 146
Query: 182 EVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
VIK S G + F F A +A GY+MD D+ + K L++ F+++
Sbjct: 147 GA--VIKSSH---GHIHPIAFATFSTVEAAKSAKLEYSGYQMDIDNAELK-LKIDFAKS 199
>gi|119568196|gb|EAW47811.1| hCG22524, isoform CRA_b [Homo sapiens]
Length = 174
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 141 PGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL 200
P + L PP+ L++ LP ++ + ++ +F F G+KEV LV +
Sbjct: 89 PNPQVLDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVCLVPGRHD--------I 138
Query: 201 CFVDFENPACAATALSALQGYRM 223
FV+FEN A A ALQG+++
Sbjct: 139 AFVEFENDGKAGAARDALQGFKI 161
>gi|66806007|ref|XP_636725.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
gi|74996697|sp|Q54J05.1|RU2B_DICDI RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|60465122|gb|EAL63221.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
Length = 241
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ TL+VE LP ++ +F F G+KEV +V ESK +G + F++FE+
Sbjct: 164 PPN--KTLFVENLPDKCDSMMLSMLFSQFQGFKEVHMV--ESK-KG-----IAFIEFEDE 213
Query: 209 ACAATALSALQGYRMDEDDP 228
+ A++ LQ +++ + P
Sbjct: 214 IKSGFAMTNLQHFKVTPEKP 233
>gi|388582417|gb|EIM22722.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 725
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
Query: 110 TGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKRE 169
+G A GP V+ +D + P D A G E +A+STL+++ + + + +
Sbjct: 476 SGAIAAGGPKPVE-----VVDKETPTDKVA-AGEE------EAASTLFIKNIAFSTPEAK 523
Query: 170 VAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFENPACAATALSALQGYRMDEDD 227
+A IF GY+ R+ K + L + FV F+N A AL+++Q Y +D
Sbjct: 524 LASIFSSLSGYRYARIQTKPDPKSAANRLSMGYGFVGFDNEEHAKDALASMQKYVLDGHS 583
Query: 228 PDSKFLRLQFSRNPG 242
KF + PG
Sbjct: 584 LQVKFAQRGKDSEPG 598
>gi|168036913|ref|XP_001770950.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677814|gb|EDQ64280.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL++ GLP D +RE+ ++FR F GY+ +L K G I+ F F + A A A
Sbjct: 17 TLFLSGLPDDIKEREIYNLFRNFEGYESCQL-----KFSGRGFQIVAFAVFTDQATALKA 71
Query: 215 LSALQGYRMD 224
L G + D
Sbjct: 72 KEELNGLKFD 81
>gi|321460285|gb|EFX71329.1| sans fille-like protein [Daphnia pulex]
Length = 227
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 150 PPN--QILFLTNLPEETNEMMLSMLFTQFPGFKEVRLVPGRHD--------IAFVEFENE 199
Query: 209 ACAATALSALQGYRM 223
+A A +LQG+++
Sbjct: 200 VQSAGARESLQGFKI 214
>gi|297843490|ref|XP_002889626.1| hypothetical protein ARALYDRAFT_887900 [Arabidopsis lyrata subsp.
lyrata]
gi|297335468|gb|EFH65885.1| hypothetical protein ARALYDRAFT_887900 [Arabidopsis lyrata subsp.
lyrata]
Length = 243
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 31/154 (20%)
Query: 69 YLQSAQYSSFTSGEASAFSGDRLRRAVPGGVTRLPVSDPSVTGRHGATGPDLVQNLRSSS 128
Y+ AQ +F E D++ R T+ P T ++G P
Sbjct: 98 YVTKAQ-GTFVPKEKKMKQEDKVERKRHAEETQQPSMPNGATTQNGMPVP---------- 146
Query: 129 IDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIK 188
PF + G +T+P ++ L++ LP + T + +F + G+KE+R++
Sbjct: 147 -----PFQPS---GQDTMP----PNNILFIHNLPIEMTSMMLQLLFEQYTGFKEIRMI-- 192
Query: 189 ESKLRGGDPLILCFVDFENPACAATALSALQGYR 222
+ + G + FV++E+ ++ A+ ALQG++
Sbjct: 193 --EAKPG----IAFVEYEDDVQSSMAMQALQGFQ 220
>gi|359358253|gb|AEV40671.1| SNF [Antheraea pernyi]
Length = 228
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 30/111 (27%)
Query: 113 HGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAH 172
HGA P ++ N+ PP+ L++ LP ++++ ++
Sbjct: 135 HGANAPGVLNNINVEQ--------------------PPN--QILFLTNLPDETSEMMLSM 172
Query: 173 IFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRM 223
+F F G+KEVRLV + FV+F N +A A ALQG+++
Sbjct: 173 LFNQFPGFKEVRLVPNRHD--------IAFVEFGNEMQSAAAKEALQGFKI 215
>gi|357482791|ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 340
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL++ GLP D RE+ ++FR F GY+ L + + F F N A A
Sbjct: 83 TLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPNNSSQA-----FAFAVFSNQQSAIMA 137
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
L AL G D + + ++ L S + R+
Sbjct: 138 LHALNGMIFDLEKGSTLYIDLAKSNSRAKRA 168
>gi|166365958|ref|YP_001658231.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|425466552|ref|ZP_18845850.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
gi|166088331|dbj|BAG03039.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|389830907|emb|CCI26790.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
Length = 98
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVI-KESKLRGGDPLILCFVDFENPACAAT 213
++YV LP + + +V +F+ + K V L + +E+K + G FV+ E P A
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGEIKRVHLPMDRETKRKRG----FAFVEMETPEQEAK 57
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
A++AL G + + L++ +R PRS FGA G R
Sbjct: 58 AIAALDGAQW-----MGRELKVNQAREKEPRSSFGAGGDR 92
>gi|123407390|ref|XP_001303000.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121884341|gb|EAX90070.1| hypothetical protein TVAG_371310 [Trichomonas vaginalis G3]
Length = 262
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
+A++TL+V GLP + T++E+ + F PF K V LV + + CFV++E A
Sbjct: 96 NANNTLFVSGLPKEVTEQEIVYEFNPFGRVKTVNLV---RDPKTNEQRSYCFVEYETEAG 152
Query: 211 AATALS 216
AL+
Sbjct: 153 FRNALN 158
>gi|224094288|ref|XP_002310126.1| predicted protein [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
+P D TL+V GLP D RE+ ++FR F GY+ L + + P F F +
Sbjct: 67 VPHDQVRTLFVAGLPDDIKPREMYNLFREFPGYESSHL---RTPSQNSQP--FAFATFTD 121
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
A A+ AL G D + + ++ L S + RS
Sbjct: 122 QPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRS 159
>gi|359484387|ref|XP_002281678.2| PREDICTED: uncharacterized protein LOC100245744 [Vitis vinifera]
Length = 399
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
+ D +++YV GLP ++T+ + +F + V+++ + RG FV F
Sbjct: 52 EMTIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINE----RGVGGKCYGFVTFT 107
Query: 207 NPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFG 248
NP A A++ + G D D + + + R G RS FG
Sbjct: 108 NPRSAIDAINDMNGR-----DIDGRIVVVNEVRTRGGRSNFG 144
>gi|147902061|ref|NP_001088194.1| small nuclear ribonucleoprotein polypeptide B [Xenopus laevis]
gi|54035240|gb|AAH84107.1| LOC495019 protein [Xenopus laevis]
Length = 223
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 146 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 195
Query: 209 ACAATALSALQGYRM 223
A +A ALQG+++
Sbjct: 196 TEAGSARDALQGFKI 210
>gi|377835922|ref|XP_003688944.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 309
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KE LV L + FV+F+N
Sbjct: 207 PPN--HILFLTNLPEETNELMLSMLFTQFRGFKEAGLVPGR--------LDIAFVEFDNE 256
Query: 209 ACAATALSALQGYRMDEDD 227
A AL ALQG+++ +++
Sbjct: 257 VQAGAALDALQGFKITQNN 275
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D +++ +F YK ++ + K R G P FV+F++P A A+
Sbjct: 22 IYVGNLPPDIRTKDIQDLF-----YKFGKVTFVDLKNRRGPPF--AFVEFDDPRDAEDAV 74
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVF 247
A GY D D LR++F R GP S F
Sbjct: 75 HARDGY-----DYDGYRLRVEFPRGGGPSSSF 101
>gi|195996479|ref|XP_002108108.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
gi|190588884|gb|EDV28906.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
Length = 298
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLR---GGDPLILCFVDFENPACA 211
TL+V GLP D +R++ +FR GY + ++K S + G + F FE A
Sbjct: 17 TLFVSGLPVDVKQRDLHLLFRGLPGYLDS--ILKTSTKQPGHGNKSGPVAFATFETRELA 74
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSR 239
A + LQG++ D D DS LR+ F++
Sbjct: 75 NEAKAILQGFQFDPDVTDSH-LRVDFAK 101
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPA 209
P STL+V L + T +E+ IF VG++ +R+ K G P F++F N
Sbjct: 202 PQVCSTLFVANLGRNITDKELRDIFGRCVGFRRLRMHKKP-----GFP-TTAFIEFANIQ 255
Query: 210 CAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A AL+ALQG + + +R++++R
Sbjct: 256 FATQALNALQGAIIQSSECGG--IRIEYAR 283
>gi|156088273|ref|XP_001611543.1| U2 small nuclear ribonucleoprotein B' [Babesia bovis T2Bo]
gi|154798797|gb|EDO07975.1| U2 small nuclear ribonucleoprotein B', putative [Babesia bovis]
Length = 285
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 27/130 (20%)
Query: 108 SVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASS------------- 154
++ G G P L+Q L+++ Q+ F A A + D+S
Sbjct: 157 AIEGMTGPGDPKLIQALQAA----QITFQAMALTKGPGVDSHDDSSRYASTASMARGLPN 212
Query: 155 -TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
TL+VEGLP + +V +F VG++E R++ + F+DF+N A
Sbjct: 213 RTLFVEGLPEGVSLADVNAVFARSVGFQEARVIAARK---------VAFIDFDNEFNAGC 263
Query: 214 ALSALQGYRM 223
A+ ALQ + M
Sbjct: 264 AMQALQEHPM 273
>gi|121702823|ref|XP_001269676.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
gi|119397819|gb|EAW08250.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
Length = 822
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFEN 207
P +STL+V+ L +T + +FRP G+ R+ K R G L + FVDF++
Sbjct: 590 PVVASTLFVKNLNFSTTNDKFVDLFRPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFKS 649
Query: 208 PACAATALSALQGYRMDE 225
A A AL+A+ GYR+D+
Sbjct: 650 KAQAQAALAAMDGYRLDQ 667
>gi|345496336|ref|XP_001602582.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Nasonia vitripennis]
Length = 924
Score = 42.7 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V+GL +TK ++ +IFR K+VR+V R G L +V+F++ CAA AL
Sbjct: 774 LFVKGLSPTTTKEDLENIFRVHGSLKDVRIV----TYRNGHSKGLAYVEFDDENCAAKAL 829
Query: 216 SALQG 220
A G
Sbjct: 830 VATDG 834
>gi|47028317|gb|AAT09091.1| small nuclear ribonucleoprotein [Bigelowiella natans]
Length = 227
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L+ LP +TK+ + +F+ + G+KEVRLV G P I F++F +
Sbjct: 150 PPN--KILFARNLPPQATKKMLETLFKQYDGFKEVRLV-------DGKPDI-AFIEFNDA 199
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
+A A LQ +++ + ++L F++
Sbjct: 200 QESALAKEGLQNFKITSQNA----MKLTFAK 226
>gi|383858361|ref|XP_003704670.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Megachile rotundata]
Length = 905
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V+GLP +TK E+ IF+ KEVR+V R G L +V++++ AA AL
Sbjct: 755 LFVKGLPVTTTKEELEEIFKVHGTLKEVRIV----TYRNGHSKGLAYVEYDDENSAAKAL 810
Query: 216 SALQGYRMDE 225
A G ++ +
Sbjct: 811 LATDGMKVSD 820
>gi|45198297|ref|NP_985326.1| AFL224Wp [Ashbya gossypii ATCC 10895]
gi|44984184|gb|AAS53150.1| AFL224Wp [Ashbya gossypii ATCC 10895]
gi|374108554|gb|AEY97460.1| FAFL224Wp [Ashbya gossypii FDAG1]
Length = 206
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 128 SIDDQLPFDAAARPGHETLPLPP-------------DASSTLYVEGLPADSTKREVAHIF 174
S+ D+ P AAA GH LP P D S +Y+ LP +RE++ F
Sbjct: 41 SVTDEQPQPAAA--GHTILPQQPARRSGAKKQAARTDLSGIIYISRLPHGFHERELSTYF 98
Query: 175 RPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGY 221
F K+VRL + + G+ F++F NP A A + Y
Sbjct: 99 AQFGDLKQVRLARNK---KTGNSRHYAFIEFANPDDAVVAQETMHNY 142
>gi|348538124|ref|XP_003456542.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Oreochromis
niloticus]
Length = 218
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + + FV+FE+
Sbjct: 141 PPN--YILFLSNLPEETNEMMLSMLFNQFPGFKEVRLVPGKHD--------IAFVEFESD 190
Query: 209 ACAATALSALQGYRM 223
A A ALQG+R+
Sbjct: 191 TQAGVAKDALQGFRI 205
>gi|189197515|ref|XP_001935095.1| multiple RNA-binding domain containing protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981043|gb|EDU47669.1| multiple RNA-binding domain containing protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 825
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++TLYV L +T + F+P G++ + K RG + FV+F NP A
Sbjct: 600 TATLYVRNLNFSTTTERLTEAFKPLSGFRSATVKTKMDPKRGVLSMGFGFVEFNNPETAT 659
Query: 213 TALSALQGYRMD 224
AL A+ G+ ++
Sbjct: 660 AALRAMDGHDLE 671
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D +++ +F YK ++ + K R G P FV+F++P A A+
Sbjct: 11 IYVGNLPPDIRTKDIQDLF-----YKFGKVTFVDLKNRRGPPF--AFVEFDDPRDAEDAV 63
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVF-GARG 251
A GY D D LR++F R GP + F G RG
Sbjct: 64 HARDGY-----DYDGYRLRVEFPRGGGPSNNFRGGRG 95
>gi|388496982|gb|AFK36557.1| unknown [Medicago truncatula]
Length = 268
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+TL+V GLP D RE+ ++FR G+ +L K G ++ F F N A
Sbjct: 21 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQAAMQ 75
Query: 214 ALSALQGYRMD 224
AL +L G + D
Sbjct: 76 ALHSLNGVKFD 86
>gi|345570654|gb|EGX53475.1| hypothetical protein AOL_s00006g341 [Arthrobotrys oligospora ATCC
24927]
Length = 255
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Query: 135 FDAAARPGHETLP---LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESK 191
+ A P +P LPP+ L+++ LP ++T + IF F G+KEVRLV
Sbjct: 159 LKSTAAPAAPQIPDEYLPPN--KILFLQNLPDNATSDILNGIFGSFEGFKEVRLVPG--- 213
Query: 192 LRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
R G + FV++EN A A +A QG + D S +++ + R
Sbjct: 214 -RKG----IAFVEYENEAGAISAKENTQGMSLGPD--GSGIVKVTYQRQ 255
>gi|170059947|ref|XP_001865584.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878529|gb|EDS41912.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 892
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+ L+V+GLP ++T ++ +F P K+VR+V R G L +V++E+ A A +
Sbjct: 729 NKLFVKGLPFEATPDDIRKLFEPHGKLKDVRVVY----YRSGKSKGLAYVEYESEAAAKS 784
Query: 214 ALSALQGYRMD 224
A+ + Y MD
Sbjct: 785 AVVHMDQYCMD 795
>gi|429327511|gb|AFZ79271.1| U1/2 small nuclear ribonucleoprotein, putative [Babesia equi]
Length = 207
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 149 PPDASS----TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVD 204
P +ASS TL+VE +P D K V +F + G+K R + + + F+D
Sbjct: 126 PAEASSKESHTLFVENIPPDINKDGVELLFNQYPGFKGCRFI---------EGRCVAFID 176
Query: 205 FENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
F + A AL LQG+RM + L + F++
Sbjct: 177 FALVSQAEAALQGLQGFRMSHNHA----LHISFAK 207
>gi|440355222|gb|AGC00413.1| SNF [Antheraea pernyi]
Length = 222
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 30/111 (27%)
Query: 113 HGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAH 172
HGA P ++ N+ PP+ L++ LP +++ ++
Sbjct: 129 HGANAPGVLNNINVEQ--------------------PPN--QILFLTNLPDGTSEMMLSM 166
Query: 173 IFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRM 223
+F F G+KEVRLV + FV+F N +A A ALQG+++
Sbjct: 167 LFNQFPGFKEVRLVPNRHD--------IAFVEFGNEMQSAAAKEALQGFKI 209
>gi|330935683|ref|XP_003305080.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
gi|311318026|gb|EFQ86793.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
Length = 825
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++TLYV L +T + F+P G++ + K RG + FV+F +P A
Sbjct: 600 TATLYVRNLNFSTTIERLTEAFKPLSGFRSATVKTKMDPKRGVLSMGFGFVEFNSPETAT 659
Query: 213 TALSALQGYRMD 224
AL A+ G+ ++
Sbjct: 660 AALRAMDGHDLE 671
>gi|343426262|emb|CBQ69793.1| related to WHI3-involved in regulation of cell size [Sporisorium
reilianum SRZ2]
Length = 1021
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 154 STLYVEGLPADSTKREVAHI-------FRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
+TL+V LP+++ ++ I F G++++ +K + +CFV+FE
Sbjct: 903 NTLFVGNLPSNAASAALSQIEDHLRGVFGSCRGFRQISFRLKSNG-------PMCFVEFE 955
Query: 207 NPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
+ A+ A+S L G+ + + +RL FS+NP
Sbjct: 956 DVYTASKAMSELNGHSLGGAIKNGG-IRLSFSKNP 989
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
T+YV LP+D ++E+ IF Y E+R + + K R D F+ F++ A A
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHK---YGEIRNI--DIKSRSRDSPAFAFIQFDDRRDAKEA 59
Query: 215 LSALQGYRMDEDDPDSKFLRLQF 237
+ A GY D K LR++F
Sbjct: 60 VRACDGYEF-----DGKRLRVEF 77
>gi|119496815|ref|XP_001265181.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
gi|119413343|gb|EAW23284.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
Length = 825
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFEN 207
P +STL+V+ L +T + +F+P G+ R+ K R G L + FVDF
Sbjct: 593 PVVTSTLFVKNLNFSTTNEKFTEVFKPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRT 652
Query: 208 PACAATALSALQGYRMDEDD 227
A A AL+A+ GY++D+ +
Sbjct: 653 KAQAQAALAAMNGYKLDQHE 672
>gi|297738892|emb|CBI28137.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
+ D +++YV GLP ++T+ + +F + V+++ + RG FV F N
Sbjct: 1 MTIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINE----RGVGGKCYGFVTFTN 56
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFG 248
P A A++ + G D D + + + R G RS FG
Sbjct: 57 PRSAIDAINDMNGR-----DIDGRIVVVNEVRTRGGRSNFG 92
>gi|410917616|ref|XP_003972282.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Takifugu rubripes]
Length = 246
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + + FV+FE+
Sbjct: 169 PPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPGKHD--------ISFVEFESD 218
Query: 209 ACAATALSALQGYRM 223
A A ALQG+R+
Sbjct: 219 VQAGVAKDALQGFRI 233
>gi|312086378|ref|XP_003145052.1| hypothetical protein LOAG_09478 [Loa loa]
Length = 396
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ +RE+ +FR GY+ L I +SK GG + FV F + A A
Sbjct: 40 TLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSK-DGGIASPVGFVTFSSAEDADIA 98
Query: 215 LSALQGYRMD 224
+ LQ D
Sbjct: 99 MKTLQSVLFD 108
>gi|405974726|gb|EKC39350.1| U1 small nuclear ribonucleoprotein A [Crassostrea gigas]
Length = 541
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+FEN
Sbjct: 464 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFENE 513
Query: 209 ACAATALSALQGYRM 223
+ A ALQG+++
Sbjct: 514 VQSGAAKDALQGFKI 528
>gi|432890232|ref|XP_004075429.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1
[Oryzias latipes]
gi|432890234|ref|XP_004075430.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 2
[Oryzias latipes]
Length = 272
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 195 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD--------IAFVEFDNE 244
Query: 209 ACAATALSALQGYRMDE 225
A A +LQG+++ +
Sbjct: 245 VQAGAARDSLQGFKITQ 261
>gi|313236302|emb|CBY11622.1| unnamed protein product [Oikopleura dioica]
Length = 161
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++T+YVE LP ++ + + +F F G+K+ R V GG FV+F + A
Sbjct: 87 AATIYVENLPDEANESMLNLLFSQFPGFKKSRPV-----PSGGK----AFVEFADAGAAT 137
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSRN 240
+A ALQG+++ + P ++L FS+
Sbjct: 138 SAKDALQGFKVTPERP----IKLTFSKK 161
>gi|351722454|ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycine max]
gi|255628437|gb|ACU14563.1| unknown [Glycine max]
Length = 241
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
P PP+ + L+++ LP DST + +F + G+KEVR+V + + G + FV++
Sbjct: 162 PAPPN--NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMV----ETKPG----IAFVEYG 211
Query: 207 NPACAATALSALQGYRMDEDDP 228
+ + A+ LQ +++ +P
Sbjct: 212 DEMQSTVAMQTLQCFKITPQNP 233
>gi|301115920|ref|XP_002905689.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans T30-4]
gi|262110478|gb|EEY68530.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans T30-4]
Length = 233
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+ L++E LP K + +F+ + G+KEVR+V + +G L FV+F + A AA
Sbjct: 158 NKILFLEELPESCNKEMLGVLFKQYQGFKEVRMVPGK---KG-----LAFVEFGDEAQAA 209
Query: 213 TALSALQGYRM 223
AL L G+++
Sbjct: 210 IALQGLFGFKL 220
>gi|393910177|gb|EFO19018.2| hypothetical protein LOAG_09478 [Loa loa]
Length = 395
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D+ +RE+ +FR GY+ L I +SK GG + FV F + A A
Sbjct: 40 TLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSK-DGGIASPVGFVTFSSAEDADIA 98
Query: 215 LSALQGYRMD 224
+ LQ D
Sbjct: 99 MKTLQSVLFD 108
>gi|359081817|ref|XP_003588184.1| PREDICTED: LOW QUALITY PROTEIN: nuclear cap-binding protein subunit
2-like [Bos taurus]
Length = 220
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Query: 97 GGVTRLPV-SDPSVTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASST 155
GGVT + +P HGAT DL SS++ +D ++ SST
Sbjct: 25 GGVTTAKLDQEPPSWCPHGATSNDLSILCNDSSLELSEYWDQKFSGDNDEQERLLMESST 84
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
LYV L +TK ++ +F + V + + + K G CFV++ N A A A+
Sbjct: 85 LYVGNLSFYTTKEQIYELFSRCGDIENVYMGLDKIKKMG---CGFCFVEYFNRAEAENAM 141
Query: 216 SALQGYRMDE 225
L G +D+
Sbjct: 142 QFLNGTSLDD 151
>gi|147843908|emb|CAN83717.1| hypothetical protein VITISV_017075 [Vitis vinifera]
Length = 216
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
+ D +++YV GLP ++T+ + +F + V+++ + RG FV F N
Sbjct: 1 MTIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINE----RGVGGKCYGFVTFTN 56
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFG 248
P A A++ + G D D + + + R G RS FG
Sbjct: 57 PRSAIDAINDMNGR-----DIDGRIVVVNEVRTRGGRSNFG 92
>gi|358340304|dbj|GAA48227.1| U1 small nuclear ribonucleoprotein A [Clonorchis sinensis]
Length = 314
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP DS + ++ +F F GY+EVR+V + FV+F N
Sbjct: 237 PPN--KILFLTNLPEDSDEAMLSMLFNQFSGYREVRMVPGRHD--------IAFVEFGNE 286
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A A LQG+ + P +R+ F++
Sbjct: 287 IEAGAAKHGLQGFNIRPGRP----IRITFAK 313
>gi|840821|emb|CAA44751.1| U2-snRNP-specific b'' [Mus musculus]
Length = 97
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ + F G+KEVRLV
Sbjct: 10 AAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLLNQFPGFKEVRLVPGRHD------- 60
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FEN A A ALQG+++
Sbjct: 61 -IAFVEFENDGQAGAARDALQGFKI 84
>gi|327283354|ref|XP_003226406.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Anolis carolinensis]
Length = 404
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 62 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 116
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 117 AAQKAVSALKATGVQAQMAKQQEQDPTNLYI 147
>gi|255587763|ref|XP_002534389.1| RNA binding protein, putative [Ricinus communis]
gi|223525395|gb|EEF27997.1| RNA binding protein, putative [Ricinus communis]
Length = 318
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL+V GLP D RE+ ++FR F GY+ L + + P F F +
Sbjct: 72 DLVRTLFVAGLPEDVMPREIYNLFREFPGYESSHL---RTPTQTSQP--FAFATFADQPS 126
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
A A+ AL G D + + ++ L S + RS
Sbjct: 127 AVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRS 161
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V L + T++E+ +F F G+ ++++ + G P+ FVDF++ AC+ A
Sbjct: 239 TLFVANLGPNCTEQELTQLFSRFAGFLKLKM-----QSTYGAPV--AFVDFQDTACSTGA 291
Query: 215 LSALQG 220
L+ LQG
Sbjct: 292 LNHLQG 297
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
A S +YV LP D +++ +F +K ++ + K R G P FV+FE+P A
Sbjct: 5 AESRVYVGNLPPDIRTKDIEDLF-----HKYGKITFIDLKNRRGPPF--AFVEFEDPRDA 57
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFG-ARGR 252
A+SA GY D D LR++F R R G +RGR
Sbjct: 58 EDAVSARDGY-----DYDGYKLRVEFPRGNSARPRGGPSRGR 94
>gi|47211375|emb|CAF89828.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + + FV+FE+
Sbjct: 141 PPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPGKHD--------IAFVEFESD 190
Query: 209 ACAATALSALQGYRM 223
A A ALQG+R+
Sbjct: 191 LQAGVAKDALQGFRI 205
>gi|298707794|emb|CBJ30225.1| RNA binding / nucleic acid binding [Ectocarpus siliculosus]
Length = 252
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+ LY GLP + T+ ++ +F + G+ E R+ GG F++F + A
Sbjct: 179 NILYATGLPPEITQVMLSKLFEQYPGFSEARMA------PGGQ----AFIEFADQMQAGI 228
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSR 239
AL+AL G+++ +P L+L F+R
Sbjct: 229 ALNALNGFKLSATNP----LQLAFAR 250
>gi|351711948|gb|EHB14867.1| RNA-binding motif, single-stranded-interacting protein 1, partial
[Heterocephalus glaber]
Length = 382
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 36 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 90
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 91 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 121
>gi|339255862|ref|XP_003370674.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316965776|gb|EFV50450.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 220
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPA 209
P + L+ LP ++T+ + +F F G+KEVRLV + FV+F+N
Sbjct: 146 PPPNKILFCTNLPEEATEHMLQMLFNQFPGFKEVRLVPNRHD--------IAFVEFDNEY 197
Query: 210 CAATALSALQGYRMDEDDP 228
+ TA LQ +++ + P
Sbjct: 198 QSKTARDTLQNFKVTPNHP 216
>gi|281348070|gb|EFB23654.1| hypothetical protein PANDA_019121 [Ailuropoda melanoleuca]
Length = 383
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 37 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 91
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 92 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 122
>gi|317106697|dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
Length = 316
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
P D TL+V GLP D RE+ ++FR F GY+ L S + P F F +
Sbjct: 71 PHDPVRTLFVAGLPDDVKPREIYNLFREFPGYESSHL---RSPTQTSQP--FAFATFIDQ 125
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRL 235
A A+ AL G D + + ++ L
Sbjct: 126 PSAVAAMHALNGMVFDLEKGSTLYIDL 152
>gi|313242687|emb|CBY39480.1| unnamed protein product [Oikopleura dioica]
Length = 196
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 126 SSSIDDQLPFDAAA----RPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYK 181
SSS DD L + A R G+ D TLY+ GLP D RE+ ++F+ ++
Sbjct: 92 SSSEDDHLLLEVKAQERPRGGN-----SEDGVRTLYIAGLPCDVKHREIRNLFQHIPEFE 146
Query: 182 EVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQF 237
VIK S G + F F A +A GY+MD D+ + K L++ F
Sbjct: 147 GA--VIKSSH---GHIHPIAFATFSTVEAAKSAKLEYSGYQMDIDNAELK-LKIDF 196
>gi|355564921|gb|EHH21410.1| hypothetical protein EGK_04471, partial [Macaca mulatta]
gi|355750567|gb|EHH54894.1| hypothetical protein EGM_03996, partial [Macaca fascicularis]
Length = 382
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 36 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 90
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 91 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 121
>gi|149263421|ref|XP_995150.2| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 309
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+ L++ LP ++ + ++ +F F G+KE LV + FV+F+N A
Sbjct: 209 NHILFLTNLPEETNELMLSMLFTQFPGFKEAHLVPGCHDI--------AFVEFDNEVQAG 260
Query: 213 TALSALQGYRMDEDD 227
AL ALQG+++ +++
Sbjct: 261 AALDALQGFKITQNN 275
>gi|303388669|ref|XP_003072568.1| U1 small nuclear ribonucleoprotein A [Encephalitozoon intestinalis
ATCC 50506]
gi|303301709|gb|ADM11208.1| U1 small nuclear ribonucleoprotein A [Encephalitozoon intestinalis
ATCC 50506]
Length = 173
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
++ +L V G+P+ T+ E+ IF+ F G + VRL+ +S L FVDF +P A
Sbjct: 98 STRSLLVTGIPSGMTREELVDIFKGFEGLEAVRLIKVKS---------LAFVDFSSPQEA 148
Query: 212 ATALSALQGYRMDEDDPDSKFL 233
+TA S + ++ D K +
Sbjct: 149 STAYSYFEDGQVKHILGDMKIM 170
>gi|149639490|ref|XP_001510957.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like isoform 1 [Ornithorhynchus anatinus]
Length = 403
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKATGVQAQMAKQQEQDPTNLYI 145
>gi|440904825|gb|ELR55286.1| RNA-binding motif, single-stranded-interacting protein 1, partial
[Bos grunniens mutus]
Length = 382
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 36 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 90
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 91 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 121
>gi|213513185|ref|NP_001135403.1| RNA-binding motif, single-stranded-interacting protein 1 isoform 2
[Mus musculus]
Length = 401
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 58 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 112
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 113 AAQKAVSALKANGVQAQMAKQQEQDPTNLYI 143
>gi|126326231|ref|XP_001366555.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 1 [Monodelphis domestica]
Length = 403
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKATGVQAQMAKQQEQDPTNLYI 145
>gi|326512082|dbj|BAJ96022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 233
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 49/80 (61%), Gaps = 10/80 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ + L+++ LP +T + +F+ + G++EVR++ E+K P I FV++E+
Sbjct: 156 PPN--NILFLQNLPDQTTSVMLQILFQQYPGFREVRMI--EAK-----PGI-AFVEYEDE 205
Query: 209 ACAATALSALQGYRMDEDDP 228
+ A+ ALQG+++ ++P
Sbjct: 206 NQSMVAMEALQGFKISPENP 225
>gi|212529316|ref|XP_002144815.1| U1 small nuclear ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
gi|210074213|gb|EEA28300.1| U1 small nuclear ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
Length = 253
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP+ L++ LP D+ + IF F G++EVRLV R G + FV++EN
Sbjct: 174 LPPN--KILFLRELPEDADADMLTSIFGRFEGFREVRLVPG----RKG----IAFVEYEN 223
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A +A A G M P++K +R+ + R
Sbjct: 224 ETGAISAKEATSGMPM---GPNAKPIRVTYQRQ 253
>gi|417400377|gb|JAA47138.1| Putative rna-binding protein elav/hu rrm superfamily [Desmodus
rotundus]
Length = 406
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|212723796|ref|NP_001132012.1| uncharacterized protein LOC100193418 [Zea mays]
gi|194693198|gb|ACF80683.1| unknown [Zea mays]
gi|413934627|gb|AFW69178.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
gi|413934628|gb|AFW69179.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 203
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLR-GGDPLILCFVDFENPA 209
D TL++ GLPAD+ REV ++FR F GY S LR G F F +
Sbjct: 55 DEVRTLFIAGLPADAKPREVYNLFRDFPGY-------VSSHLRTGKSSQAYAFAVFADQQ 107
Query: 210 CAATALSALQGYRMD 224
A ALSA G D
Sbjct: 108 SALAALSATNGMVFD 122
>gi|431894849|gb|ELK04642.1| RNA-binding motif, single-stranded-interacting protein 1 [Pteropus
alecto]
Length = 394
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|354476557|ref|XP_003500491.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like isoform 2 [Cricetulus griseus]
Length = 386
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|353238521|emb|CCA70464.1| hypothetical protein PIIN_04402 [Piriformospora indica DSM 11827]
Length = 1077
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 154 STLYVEGLPADSTKRE--------VAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDF 205
+TLYV LPA+ T + + +F GY ++ K + +CFV+F
Sbjct: 835 NTLYVGNLPANPTNPQATKALEEALVQLFSRCQGYSKLSFRQKSNG-------PMCFVEF 887
Query: 206 ENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP 241
E+ A A+ ALS L G ++ S +RL +S+NP
Sbjct: 888 EDVASASKALSDLYGNNLNGLI-KSGGIRLSYSKNP 922
>gi|350593521|ref|XP_003133475.3| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Sus scrofa]
Length = 403
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|348585929|ref|XP_003478723.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like isoform 1 [Cavia porcellus]
Length = 403
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|78369252|ref|NP_001030438.1| RNA-binding motif, single-stranded-interacting protein 1 [Bos
taurus]
gi|122143021|sp|Q3ZBP3.1|RBMS1_BOVIN RecName: Full=RNA-binding motif, single-stranded-interacting
protein 1
gi|73586813|gb|AAI03187.1| RNA binding motif, single stranded interacting protein 1 [Bos
taurus]
gi|296490570|tpg|DAA32683.1| TPA: RNA-binding motif, single-stranded-interacting protein 1 [Bos
taurus]
Length = 403
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|297264157|ref|XP_001091917.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Macaca mulatta]
Length = 422
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|344245476|gb|EGW01580.1| RNA-binding motif, single-stranded-interacting protein 1
[Cricetulus griseus]
Length = 419
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|212529314|ref|XP_002144814.1| U1 small nuclear ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
gi|210074212|gb|EEA28299.1| U1 small nuclear ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
Length = 254
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP+ L++ LP D+ + IF F G++EVRLV R G + FV++EN
Sbjct: 175 LPPN--KILFLRELPEDADADMLTSIFGRFEGFREVRLVPG----RKG----IAFVEYEN 224
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A +A A G M P++K +R+ + R
Sbjct: 225 ETGAISAKEATSGMPM---GPNAKPIRVTYQRQ 254
>gi|149022092|gb|EDL78986.1| rCG26906, isoform CRA_a [Rattus norvegicus]
Length = 401
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 58 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 112
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 113 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 143
>gi|413934629|gb|AFW69180.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 208
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLR-GGDPLILCFVDFENPA 209
D TL++ GLPAD+ REV ++FR F GY S LR G F F +
Sbjct: 55 DEVRTLFIAGLPADAKPREVYNLFRDFPGY-------VSSHLRTGKSSQAYAFAVFADQQ 107
Query: 210 CAATALSALQGYRMD 224
A ALSA G D
Sbjct: 108 SALAALSATNGMVFD 122
>gi|213513205|ref|NP_001135404.1| RNA-binding motif, single-stranded-interacting protein 1 isoform 1
[Mus musculus]
Length = 417
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 58 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 112
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 113 AAQKAVSALKANGVQAQMAKQQEQDPTNLYI 143
>gi|194697902|gb|ACF83035.1| unknown [Zea mays]
gi|413934630|gb|AFW69181.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 306
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL++ GLPAD+ REV ++FR F GY L G F F +
Sbjct: 55 DEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRT------GKSSQAYAFAVFADQQS 108
Query: 211 AATALSALQGYRMD 224
A ALSA G D
Sbjct: 109 ALAALSATNGMVFD 122
>gi|194222257|ref|XP_001493156.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Equus caballus]
Length = 389
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKANGVQAQMAKQQEQDPTNLYI 112
>gi|426221033|ref|XP_004004716.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Ovis aries]
Length = 406
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|395846669|ref|XP_003796023.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Otolemur garnettii]
Length = 389
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|402888463|ref|XP_003907580.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 1 [Papio anubis]
gi|384944040|gb|AFI35625.1| RNA-binding motif, single-stranded-interacting protein 1 isoform c
[Macaca mulatta]
Length = 403
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|354476555|ref|XP_003500490.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like isoform 1 [Cricetulus griseus]
Length = 403
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|402888465|ref|XP_003907581.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 2 [Papio anubis]
Length = 419
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|149022096|gb|EDL78990.1| rCG26906, isoform CRA_d [Rattus norvegicus]
Length = 388
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 45 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 99
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 100 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 130
>gi|384944038|gb|AFI35624.1| RNA-binding motif, single-stranded-interacting protein 1 isoform a
[Macaca mulatta]
Length = 406
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|345797246|ref|XP_535930.3| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Canis lupus familiaris]
Length = 389
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|344268402|ref|XP_003406049.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Loxodonta africana]
Length = 446
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 103 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 157
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 158 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 188
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
T+YV LP+D ++E+ IF Y E+R + + K R D F+ F++ A A
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHK---YGEIRNI--DIKSRSRDSPAFAFIQFDDRRDAKEA 59
Query: 215 LSALQGYRMDEDDPDSKFLRLQF 237
+ A GY D K LR++F
Sbjct: 60 VRARDGYEF-----DGKRLRVEF 77
>gi|213513165|ref|NP_064692.2| RNA-binding motif, single-stranded-interacting protein 1 isoform 3
[Mus musculus]
gi|55976561|sp|Q91W59.1|RBMS1_MOUSE RecName: Full=RNA-binding motif, single-stranded-interacting
protein 1; AltName: Full=Single-stranded DNA-binding
protein MSSP-1
gi|74151115|dbj|BAE27681.1| unnamed protein product [Mus musculus]
Length = 403
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKANGVQAQMAKQQEQDPTNLYI 145
>gi|74179640|dbj|BAE22471.1| unnamed protein product [Mus musculus]
Length = 403
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKANGVQAQMAKQQEQDPTNLYI 145
>gi|410968720|ref|XP_003990849.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Felis catus]
Length = 389
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|74221534|dbj|BAE21490.1| unnamed protein product [Mus musculus]
Length = 370
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKANGVQAQMAKQQEQDPTNLYI 112
>gi|4730906|dbj|BAA77262.1| MSSP [Mus musculus]
gi|4730921|dbj|BAA77264.1| MSSP [Mus musculus]
gi|133777054|gb|AAH16501.2| RNA binding motif, single stranded interacting protein 1 [Mus
musculus]
gi|148695021|gb|EDL26968.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Mus musculus]
gi|148695022|gb|EDL26969.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Mus musculus]
gi|148695023|gb|EDL26970.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Mus musculus]
gi|148695024|gb|EDL26971.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Mus musculus]
gi|148695025|gb|EDL26972.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Mus musculus]
Length = 370
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKANGVQAQMAKQQEQDPTNLYI 112
>gi|348585931|ref|XP_003478724.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like isoform 2 [Cavia porcellus]
Length = 356
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|149022093|gb|EDL78987.1| rCG26906, isoform CRA_b [Rattus norvegicus]
gi|149022094|gb|EDL78988.1| rCG26906, isoform CRA_b [Rattus norvegicus]
gi|149022097|gb|EDL78991.1| rCG26906, isoform CRA_b [Rattus norvegicus]
Length = 370
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|34785556|gb|AAH57866.1| Rbms1 protein [Mus musculus]
gi|74145550|dbj|BAE36195.1| unnamed protein product [Mus musculus]
Length = 386
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKANGVQAQMAKQQEQDPTNLYI 112
>gi|354476559|ref|XP_003500492.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like isoform 3 [Cricetulus griseus]
Length = 356
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|332020337|gb|EGI60759.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Acromyrmex
echinatior]
Length = 903
Score = 41.6 bits (96), Expect = 0.33, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V+GLP TK ++ IF+ KEVRLV R G L +V++ + A AA AL
Sbjct: 754 LFVKGLPLTMTKEKLEEIFKVHGDLKEVRLV----TYRNGHSKGLAYVEYHDEATAAKAL 809
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSV 246
+ G ++ + K + + S+ P + +
Sbjct: 810 LSTDGMKIQD-----KVINVAISQPPDRKKI 835
>gi|291391615|ref|XP_002712257.1| PREDICTED: RNA binding motif, single stranded interacting protein 1
[Oryctolagus cuniculus]
Length = 356
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|74219194|dbj|BAE26733.1| unnamed protein product [Mus musculus]
Length = 370
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKANGVQAQMAKQQEQDPTNLYI 112
>gi|395519616|ref|XP_003763939.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 1 [Sarcophilus harrisii]
Length = 390
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 47 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 101
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 102 AAQKAVSALKATGVQAQMAKQQEQDPTNLYI 132
>gi|242093984|ref|XP_002437482.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
gi|241915705|gb|EER88849.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
Length = 310
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL++ GLPAD+ REV ++FR F GY L G F F + A TA
Sbjct: 63 TLFIAGLPADAKPREVYNLFRDFPGYVSSHLRT------GKSSQAYAFAVFADQQSALTA 116
Query: 215 LSALQGYRMD 224
LS G D
Sbjct: 117 LSGTNGMVFD 126
>gi|409043823|gb|EKM53305.1| hypothetical protein PHACADRAFT_185997 [Phanerochaete carnosa
HHB-10118-sp]
Length = 959
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 111 GRHGATGPDLVQNLRSSSIDDQLPFDAA-ARPGHETLPLPPDASSTLYVEGLPADSTKRE 169
G H +G + L ++ +D + D A+PG LP PP+ +T++V +P ++T+ E
Sbjct: 453 GVHDDSGDESGSELGNNDSEDSMSVDEEDAKPGRPQLP-PPEVGTTVFVRNVPFEATEDE 511
Query: 170 VAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
+ +FR F + ++ + R +CF + E+
Sbjct: 512 LRAVFRAFGPLRYAKIAVDHETGRSRGTSFVCFWNKEH 549
>gi|395519618|ref|XP_003763940.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 2 [Sarcophilus harrisii]
Length = 356
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKATGVQAQMAKQQEQDPTNLYI 112
>gi|334330107|ref|XP_001366652.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 3 [Monodelphis domestica]
Length = 356
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKATGVQAQMAKQQEQDPTNLYI 112
>gi|58865940|ref|NP_001012184.1| RNA-binding motif, single-stranded-interacting protein 1 [Rattus
norvegicus]
gi|81909957|sp|Q5PQP1.1|RBMS1_RAT RecName: Full=RNA-binding motif, single-stranded-interacting
protein 1
gi|56269819|gb|AAH87094.1| RNA binding motif, single stranded interacting protein 1 [Rattus
norvegicus]
gi|149022095|gb|EDL78989.1| rCG26906, isoform CRA_c [Rattus norvegicus]
Length = 403
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|148695026|gb|EDL26973.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_b [Mus musculus]
Length = 393
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 50 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 104
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 105 AAQKAVSALKANGVQAQMAKQQEQDPTNLYI 135
>gi|350425556|ref|XP_003494159.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus impatiens]
Length = 914
Score = 41.6 bits (96), Expect = 0.36, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V+GLP +TK ++ IF+ KEVR+V R G L +V+F + A AL
Sbjct: 771 LFVKGLPVSTTKEDLEEIFKVHGSLKEVRIV----TYRNGHSKGLAYVEFVDENSAGKAL 826
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNP 241
A+ G ++ + K + + S+ P
Sbjct: 827 LAIDGMKIGD-----KIISVAISQPP 847
>gi|63592914|ref|XP_356179.3| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1 [Mus
musculus]
Length = 281
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N A
Sbjct: 206 NHILFLTNLPEETNELMLSMLFTQFPGFKEVRLVPGRHDID--------FVEFDNEVQAG 257
Query: 213 TALSALQGYRMDEDD 227
A LQG+++ +++
Sbjct: 258 AARDVLQGFKITQNN 272
>gi|301787247|ref|XP_002929039.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Ailuropoda melanoleuca]
Length = 405
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 62 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 116
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 117 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 147
>gi|330802792|ref|XP_003289397.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
gi|325080515|gb|EGC34067.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
Length = 628
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
+ S+ L+++ LPAD T ++ +F P+ E ++++ + G FV F N +
Sbjct: 179 NPSNNLFIKPLPADVTDEQLRKLFEPYGKIVECKVMLDQ----NGQSKFAGFVRFFNDSE 234
Query: 211 AATALSALQGYRMDED 226
AA+A+ A+ G ++ +D
Sbjct: 235 AASAIDAMNGIKITKD 250
>gi|309266585|ref|XP_003086803.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 282
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFTQFPGFKEVRLVPGRHDID--------FVEFDNE 254
Query: 209 ACAATALSALQGYRMDEDD 227
A A LQG+++ +++
Sbjct: 255 VQAGAARDVLQGFKITQNN 273
>gi|148689095|gb|EDL21042.1| mCG15722 [Mus musculus]
Length = 281
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+ L++ LP ++ + ++ +F F G+KEVRLV + FV+F+N A
Sbjct: 206 NHILFLTNLPEETNELMLSMLFTQFPGFKEVRLVPGRHDID--------FVEFDNEVQAG 257
Query: 213 TALSALQGYRMDEDD 227
A LQG+++ +++
Sbjct: 258 AARDVLQGFKITQNN 272
>gi|261188230|ref|XP_002620531.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239593278|gb|EEQ75859.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239609317|gb|EEQ86304.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ER-3]
gi|327354414|gb|EGE83271.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ATCC
18188]
Length = 825
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFEN 207
P +STL+V L +T + +F+P G+ R+ K R G+ L + FV+F +
Sbjct: 593 PLETSTLFVRNLNFSTTNARLTEVFQPLDGFLSARVKTKTDPKRPGETLSMGFGFVEFRS 652
Query: 208 PACAATALSALQGYRMDEDD 227
A A AL+A+QGY++D+ +
Sbjct: 653 SAQARAALAAMQGYKLDQHE 672
>gi|157131009|ref|XP_001655775.1| hypothetical protein AaeL_AAEL011963 [Aedes aegypti]
gi|108871684|gb|EAT35909.1| AAEL011963-PA [Aedes aegypti]
Length = 891
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+ L+V+GLP ++T +V +F P+ K+VR+V R G L +V++E+ A
Sbjct: 733 NKLFVKGLPFEATNDDVRKLFEPYGKLKDVRVVY----YRSGKSKGLAYVEYESEVAAKN 788
Query: 214 ALSALQGYRMD 224
A+ L + M+
Sbjct: 789 AVLHLDQHNMN 799
>gi|340728933|ref|XP_003402766.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus terrestris]
Length = 914
Score = 41.2 bits (95), Expect = 0.42, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V+GLP +TK ++ IF+ KEVR+V R G L +V+F + A AL
Sbjct: 771 LFVKGLPVTTTKEDLEEIFKVHGSLKEVRIV----TYRNGHSKGLAYVEFVDENSAGKAL 826
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNP 241
A+ G ++ + K + + S+ P
Sbjct: 827 LAIDGMKIGD-----KIISVAISQPP 847
>gi|428185283|gb|EKX54136.1| hypothetical protein GUITHDRAFT_100384 [Guillardia theta CCMP2712]
Length = 424
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
+L++ G+P D RE+ ++FR F G+ + S L +++ FV FE P A A
Sbjct: 136 SLFLSGIPYDCRAREIYNMFRLFPGF-------RYSTLHRNGKILVAFVTFETPDQAINA 188
Query: 215 LSALQGYRMD 224
+ G R D
Sbjct: 189 GRQVNGTRFD 198
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
AS T+YV LP D +RE+ IF YK R+V + KL P CF++FE+ A
Sbjct: 5 ASRTIYVGNLPGDVREREIEDIF-----YKYGRIVDIDLKL-PPRPPGYCFLEFEDARDA 58
Query: 212 ATALSALQGYRMD 224
A+ GY D
Sbjct: 59 EDAIRGRDGYNFD 71
>gi|340368063|ref|XP_003382572.1| PREDICTED: hypothetical protein LOC100640859 [Amphimedon
queenslandica]
Length = 790
Score = 41.2 bits (95), Expect = 0.45, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ LP ++T+ + +F F G +E+RLV + + FV++EN + A A+
Sbjct: 718 LFISNLPPETTEVMLKMLFEQFPGLQEIRLVPSRTD--------IAFVEYENESQATEAM 769
Query: 216 SALQGYRMDEDDP 228
S+LQ +++ P
Sbjct: 770 SSLQDFKIVPTHP 782
>gi|167517167|ref|XP_001742924.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778023|gb|EDQ91638.1| predicted protein [Monosiga brevicollis MX1]
Length = 231
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPACAAT 213
+YV G+P D+ ++E+A FRPF ++ ++ K +G CFV+++ P A
Sbjct: 21 VYVGGIPFDAGEQEIAEAFRPFGAIQQCAFTYDQALNKHKG-----FCFVEYDAPEAALL 75
Query: 214 ALSALQGYRM 223
AL + Y +
Sbjct: 76 ALEQMTSYNI 85
>gi|19112391|ref|NP_595599.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|48474243|sp|O13620.1|MRD1_SCHPO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|2257512|dbj|BAA21408.1| hypothetical protein YPR112c [Schizosaccharomyces pombe]
gi|13810221|emb|CAC37370.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe]
Length = 833
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFENPAC 210
++T+YV+ L + + E +F+P GY + K R G L + FV+F++ A
Sbjct: 618 TATIYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDKAS 677
Query: 211 AATALSALQGYRMD 224
A A+ A+ G+ +D
Sbjct: 678 AVAAMHAMNGFVLD 691
>gi|387915158|gb|AFK11188.1| RNA binding protein with multiple splicing 2 [Callorhinchus milii]
Length = 180
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 164 DSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRM 223
D RE+ +FRPF GY E L+ SK G FV F++ A A +AL G R
Sbjct: 2 DIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRTGAEAAKNALNGIRF 54
Query: 224 DEDDPDSKFLRLQFSR 239
D ++P + LRL+F++
Sbjct: 55 DPENPQT--LRLEFAK 68
>gi|74216579|dbj|BAE37728.1| unnamed protein product [Mus musculus]
Length = 400
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 140 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKG-----YGFVDFDSPA 194
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 195 AAQKAVSALKANGVQAQMAKQQEQDPTNLYI 225
>gi|380807337|gb|AFE75544.1| RNA-binding motif, single-stranded-interacting protein 1 isoform c,
partial [Macaca mulatta]
Length = 240
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 41 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 95
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 96 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 126
>gi|340716150|ref|XP_003396564.1| PREDICTED: protein couch potato-like [Bombus terrestris]
Length = 315
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 14/90 (15%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL+V GLP D+ RE+ +FR + GY+ L + + G + F+ PA
Sbjct: 20 DEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTS---KNGKTASVSHYFFKLPA- 75
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRN 240
QG R D D P + +RL+F+++
Sbjct: 76 --------QGVRFDPDMPQT--IRLEFAKS 95
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
STL+V L ++ E+ IF F G+ +R+ K GG P+ FV++++ AA
Sbjct: 215 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 267
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRN 240
A++ LQG + D + +R++++++
Sbjct: 268 AMATLQGSFLLSSDRGA--IRIEYAKS 292
>gi|355715846|gb|AES05421.1| RNA binding motif, single stranded interacting protein 1 [Mustela
putorius furo]
Length = 223
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 35 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 89
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 90 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 120
>gi|380807335|gb|AFE75543.1| RNA-binding motif, single-stranded-interacting protein 1 isoform a,
partial [Macaca mulatta]
Length = 243
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 41 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 95
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 96 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 126
>gi|224059524|ref|XP_002299889.1| predicted protein [Populus trichocarpa]
gi|222847147|gb|EEE84694.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V L + +T E+ +F PF E RLV++ LR P FV FE+ A A AL
Sbjct: 9 LFVSRLSSYTTNHELKRLFSPFGAVSEARLVVESKTLR---PKGFGFVTFESEADAHKAL 65
Query: 216 SALQG 220
A+ G
Sbjct: 66 KAMNG 70
>gi|157118056|ref|XP_001658986.1| hypothetical protein AaeL_AAEL008164 [Aedes aegypti]
gi|108875838|gb|EAT40063.1| AAEL008164-PA [Aedes aegypti]
Length = 363
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGD-P 197
ARP E + + LY+ GLP T+ E+ IFRP+ R++++E G D P
Sbjct: 117 ARPSSEGI-----KGANLYISGLPKTITQEELETIFRPYGEIITSRVLVQE----GNDKP 167
Query: 198 LILCFVDFENPACAATALSALQGYR-MDEDDPDSKFLRLQFSRNPGPRS 245
+ F+ F+ A A++AL G DP + ++FS PG +
Sbjct: 168 KGVGFIRFDQRKEAERAIAALNGTTPKGLTDP----ITVKFSNTPGQNT 212
>gi|12850013|dbj|BAB28565.1| unnamed protein product [Mus musculus]
Length = 225
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPL 198
A P + PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 138 AAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHD------- 188
Query: 199 ILCFVDFENPACAATALSALQGYRM 223
+ FV+FE A A ALQG+++
Sbjct: 189 -IAFVEFEYDGQAGAARDALQGFKI 212
>gi|198434778|ref|XP_002132163.1| PREDICTED: similar to GH24608 isoform 1 [Ciona intestinalis]
Length = 216
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + + +F F G+KEVRLV + FV+FE
Sbjct: 139 PPN--HILFLNNLPPETQEEMLNMLFNRFNGFKEVRLVPGRHD--------IAFVEFEGE 188
Query: 209 ACAATALSALQGYRM 223
A+ A ALQG+++
Sbjct: 189 QQASEAKGALQGFKI 203
>gi|159130709|gb|EDP55822.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
A1163]
Length = 825
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFEN 207
P +STL+V+ L +T +F+P G+ R+ K R G L + FVDF
Sbjct: 593 PVVTSTLFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRT 652
Query: 208 PACAATALSALQGYRMDEDD 227
A A AL+A+ GY++D+ +
Sbjct: 653 KAQAQAALAAMDGYKLDQHE 672
>gi|410923104|ref|XP_003975022.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Takifugu rubripes]
Length = 933
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+++ GLP TK+++ + + ++VRLV R G P L +V+F A+ A+
Sbjct: 776 IFISGLPFSCTKKQLEEVCSSYGTIRDVRLV----TYRSGKPKGLAYVEFAEETHASQAV 831
Query: 216 SALQGYRMD--------EDDPDSKFLRLQFSR--NPGPRSVFGARGR 252
+ G +D + P + R +P PR V+GARG+
Sbjct: 832 LKMDGTVIDGNTISVAISNPPRRNMDKPGSGRPLDPIPRQVYGARGK 878
>gi|225563037|gb|EEH11316.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus G186AR]
Length = 801
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFEN 207
P +STL+V L +T + +F+P G+ R+ K R G+ L + FV+F
Sbjct: 567 PLETSTLFVRNLNFSTTNARLTEVFQPLDGFLSARVKTKADPKRPGETLSMGFGFVEFRT 626
Query: 208 PACAATALSALQGYRMDEDD 227
A A AL+ +QGY++D+ +
Sbjct: 627 AAQAHAALATMQGYKLDQHE 646
>gi|70990768|ref|XP_750233.1| pre-rRNA processing protein Mrd1 [Aspergillus fumigatus Af293]
gi|74669789|sp|Q4WJT7.1|MRD1_ASPFU RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|66847865|gb|EAL88195.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
Af293]
Length = 825
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFEN 207
P +STL+V+ L +T +F+P G+ R+ K R G L + FVDF
Sbjct: 593 PVVTSTLFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRT 652
Query: 208 PACAATALSALQGYRMDEDD 227
A A AL+A+ GY++D+ +
Sbjct: 653 KAQAQAALAAMDGYKLDQHE 672
>gi|119631791|gb|EAX11386.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_d [Homo sapiens]
Length = 371
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|332234027|ref|XP_003266209.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 4 [Nomascus leucogenys]
Length = 370
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|256078401|ref|XP_002575484.1| bruno-like rna binding protein [Schistosoma mansoni]
gi|350645920|emb|CCD59385.1| bruno-like rna binding protein [Schistosoma mansoni]
Length = 479
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 19/113 (16%)
Query: 133 LPFDAAAR--PGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVI--- 187
LP DA + P T L P+ + L++ LP + E+A +F PF ++ +
Sbjct: 371 LPTDALSHLYPSVPTYGLWPEGCN-LFIYHLPQEFGDPELAQMFMPFGTVISAKVYVDRA 429
Query: 188 -KESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
+SK G FV F+NP A TA+ A+ G+++ K L++Q R
Sbjct: 430 TNQSKCFG-------FVSFDNPTSAQTAIHAMNGFQIGM-----KRLKVQLKR 470
>gi|119631792|gb|EAX11387.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_e [Homo sapiens]
Length = 384
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|326433216|gb|EGD78786.1| hypothetical protein PTSG_01762 [Salpingoeca sp. ATCC 50818]
Length = 462
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++ L+V+ +PA +T + ++F+ F G+KEVR V + FV+++NP +
Sbjct: 387 NAILFVQNIPAGTTAERITNLFKQFAGFKEVRTVPSRPD--------IAFVEYDNPMQSG 438
Query: 213 TALSALQGYRM 223
A L + +
Sbjct: 439 YAKVQLHQHEI 449
>gi|353234729|emb|CCA66751.1| related to small nuclear ribonucleoprotein snRNP U1A
[Piriformospora indica DSM 11827]
Length = 274
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP+ L+V+ LP D TK + +F F + EVR++ + + FV++ +
Sbjct: 196 LPPN--QILFVQNLPPDITKDALVAMFSRFENFYEVRMIPTKKD--------IAFVEYAD 245
Query: 208 PACAATALSALQGYRMD 224
A A A AL +++D
Sbjct: 246 EASATVAKDALHNFKLD 262
>gi|321261626|ref|XP_003195532.1| polyadenylation factor 64 kDasubunit [Cryptococcus gattii WM276]
gi|317462006|gb|ADV23745.1| Polyadenylation factor 64 kDasubunit, putative [Cryptococcus gattii
WM276]
Length = 452
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPF--VGYKEVRLVIKESKLRGGDPLILCFVDF 205
+PP+AS T++V +P D ++ ++A++F V E++ + +G FV F
Sbjct: 1 MPPNASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKG-----YAFVQF 55
Query: 206 ENPACAATALSALQGYRMDEDDP-DSKFLRLQFSRN-PGPR 244
+ A A +A+ LQ D P + + LR++ S + PGPR
Sbjct: 56 YDEATALSAVRNLQ------DAPVNGRNLRVELSTDEPGPR 90
>gi|242003014|ref|XP_002422579.1| squamous cell carcinoma antigen, putative [Pediculus humanus
corporis]
gi|212505369|gb|EEB09841.1| squamous cell carcinoma antigen, putative [Pediculus humanus
corporis]
Length = 858
Score = 40.8 bits (94), Expect = 0.57, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V GLP +T ++ +F F K+VRLV R G L +V+FE+ A AA A+
Sbjct: 698 LFVRGLPFSTTVEDLKTLFSKFGSLKDVRLV----TYRNGHSKGLAYVEFEDEASAAQAV 753
Query: 216 SALQGYRMD--------EDDPDSKFLRLQFSRNPGPRSV------FGARGR 252
+ G ++ + P+ K +N G S+ G RGR
Sbjct: 754 LSTDGTTIENKQISVAISNPPERKGETSLLQQNKGVVSLGGGPKEMGPRGR 804
>gi|395732396|ref|XP_002812563.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 1 [Pongo abelii]
Length = 403
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGIQAQMAKQQEQDPTNLYI 145
>gi|307102554|gb|EFN50825.1| hypothetical protein CHLNCDRAFT_28661 [Chlorella variabilis]
Length = 219
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++ L+VE LPA +T + +F+ F G KEV V P I F++FE A
Sbjct: 145 NAKLFVENLPAATTAAMLEMLFQQFPGCKEVTTV-------PAKPGI-AFIEFETEMQAT 196
Query: 213 TALSALQGYRM 223
A++ LQG+++
Sbjct: 197 VAMTGLQGFKV 207
>gi|225716164|gb|ACO13928.1| RNA-binding protein with multiple splicing [Esox lucius]
Length = 100
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ +FRPF GY E L+ KL P + FV F+N A A
Sbjct: 22 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLI----KLTSKQP--VGFVTFDNRTGAEAA 74
Query: 215 LSALQ 219
+AL
Sbjct: 75 KNALN 79
>gi|225438787|ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL++ GLP D RE+ ++FR F GY+ L S + P F F +
Sbjct: 78 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL---RSPSQNSQP--FAFAVFLDQQS 132
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
A A+ AL G D + + ++ L S + RS
Sbjct: 133 AIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRS 167
>gi|4506447|ref|NP_002888.1| RNA-binding motif, single-stranded-interacting protein 1 isoform c
[Homo sapiens]
gi|332234023|ref|XP_003266207.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 2 [Nomascus leucogenys]
gi|332814558|ref|XP_515853.3| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 3 [Pan troglodytes]
gi|558529|dbj|BAA05841.1| SCR2 [Homo sapiens]
gi|15278081|gb|AAH12992.1| RNA binding motif, single stranded interacting protein 1 [Homo
sapiens]
gi|15278086|gb|AAH12993.1| RNA binding motif, single stranded interacting protein 1 [Homo
sapiens]
gi|410222060|gb|JAA08249.1| RNA binding motif, single stranded interacting protein 1 [Pan
troglodytes]
gi|410338641|gb|JAA38267.1| RNA binding motif, single stranded interacting protein 1 [Pan
troglodytes]
Length = 403
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|392570636|gb|EIW63808.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 281
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 18/106 (16%)
Query: 137 AAARPGHETLP---LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLR 193
AA RP + +P LPP+ L+++ LP + +K ++ +F + EVRL+ + +
Sbjct: 190 AAKRPNVQ-MPDEYLPPN--KILFLQNLPKNVSKDQLMALFAQYPNLHEVRLIPTKKDI- 245
Query: 194 GGDPLILCFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
FV+F + A A A AL Y++D ++ +++ F+R
Sbjct: 246 -------AFVEFLDEASATVAKDALHNYKLDGENK----IKITFAR 280
>gi|296082378|emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL++ GLP D RE+ ++FR F GY+ L S + P F F +
Sbjct: 75 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL---RSPSQNSQP--FAFAVFLDQQS 129
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
A A+ AL G D + + ++ L S + RS
Sbjct: 130 AIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRS 164
>gi|449447968|ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
gi|449515829|ref|XP_004164950.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 335
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 141 PGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL 200
P T PP +TL++ L + + E+ +F G+K+++++ +E +
Sbjct: 220 PVQNTKDNPP--CNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERH-------TV 270
Query: 201 CFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGAR 250
CF++FE+ A +LQG + S +R+QFS+NP FG R
Sbjct: 271 CFIEFEDVNNATNVHHSLQGAVIPSS--GSVGMRIQFSKNP-----FGKR 313
>gi|395732398|ref|XP_003776061.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 3 [Pongo abelii]
Length = 419
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGIQAQMAKQQEQDPTNLYI 145
>gi|8400718|ref|NP_058520.1| RNA-binding motif, single-stranded-interacting protein 1 isoform a
[Homo sapiens]
gi|55977783|sp|P29558.3|RBMS1_HUMAN RecName: Full=RNA-binding motif, single-stranded-interacting
protein 1; AltName: Full=Single-stranded DNA-binding
protein MSSP-1; AltName: Full=Suppressor of CDC2 with
RNA-binding motif 2
gi|17511979|gb|AAH18951.1| RNA binding motif, single stranded interacting protein 1 [Homo
sapiens]
gi|312152474|gb|ADQ32749.1| RNA binding motif, single stranded interacting protein 1 [synthetic
construct]
gi|410222062|gb|JAA08250.1| RNA binding motif, single stranded interacting protein 1 [Pan
troglodytes]
gi|410296208|gb|JAA26704.1| RNA binding motif, single stranded interacting protein 1 [Pan
troglodytes]
gi|410338639|gb|JAA38266.1| RNA binding motif, single stranded interacting protein 1 [Pan
troglodytes]
Length = 406
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|395732394|ref|XP_003776060.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 2 [Pongo abelii]
Length = 389
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGIQAQMAKQQEQDPTNLYI 112
>gi|344250483|gb|EGW06587.1| U1 small nuclear ribonucleoprotein A [Cricetulus griseus]
Length = 104
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ K ++ +F G+KEV LV + + FV+F+N
Sbjct: 27 PPN--HILFLTNLPEETNKLMLSMLFNQCPGFKEVHLVPGQHDI--------AFVEFDNE 76
Query: 209 ACAATALSALQGYRMDEDDPDSKFLRLQFSR 239
A A ALQG+++ +++ +++ F++
Sbjct: 77 VQAGAAPDALQGFKITQNNA----MKISFAK 103
>gi|332234025|ref|XP_003266208.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 3 [Nomascus leucogenys]
gi|332814560|ref|XP_003309323.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 2 [Pan troglodytes]
gi|194387572|dbj|BAG60150.1| unnamed protein product [Homo sapiens]
Length = 419
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|198434776|ref|XP_002132167.1| PREDICTED: similar to GH24608 isoform 2 [Ciona intestinalis]
Length = 220
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP ++ + + +F F G+KEVRLV + FV+FE
Sbjct: 143 PPN--HILFLNNLPPETQEEMLNMLFNRFNGFKEVRLVPGRHD--------IAFVEFEGE 192
Query: 209 ACAATALSALQGYRM 223
A+ A ALQG+++
Sbjct: 193 QQASEAKGALQGFKI 207
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
AS T+YV LP D +RE+ +F YK R+V + KL P CF++FE+ A
Sbjct: 5 ASRTIYVGNLPGDVREREIEDLF-----YKYGRIVDIDLKL-PPRPPGYCFIEFEDARDA 58
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFS---RNPGPRSV 246
A+ GY D + LR++ + R P P SV
Sbjct: 59 EDAIRGRDGYNFDGNR-----LRVEIAHGGRGPPPASV 91
>gi|403258920|ref|XP_003921989.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Saimiri boliviensis boliviensis]
Length = 389
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|332234021|ref|XP_003266206.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 1 [Nomascus leucogenys]
gi|332814556|ref|XP_003309322.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 1 [Pan troglodytes]
gi|397500598|ref|XP_003820996.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Pan paniscus]
gi|426337503|ref|XP_004032743.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Gorilla gorilla gorilla]
Length = 389
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|425772063|gb|EKV10488.1| U1 small nuclear ribonucleoprotein, putative [Penicillium digitatum
Pd1]
gi|425777240|gb|EKV15421.1| U1 small nuclear ribonucleoprotein, putative [Penicillium digitatum
PHI26]
Length = 249
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP+ L++ LP D+T+ ++ IF F G++EVRLV R G + FV++E
Sbjct: 170 LPPN--KILFLRELPDDATQEGLSAIFGRFEGFQEVRLVPG----RKG----IAFVEYEA 219
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A A +A A G M + K +R+ + R
Sbjct: 220 EAGAISAKEATSGMPMGD---QGKAIRVTYQRQ 249
>gi|13537210|dbj|BAB40781.1| HrETR-1 [Halocynthia roretzi]
Length = 594
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVI----KESKLRGGDPLILCFVDFENPACA 211
L++ LP + T ++A++F+PF ++ I +SK G FV ++NP A
Sbjct: 511 LFIYHLPQEFTDADLANVFQPFGNVISAKVFIDRATNQSKCFG-------FVSYDNPVSA 563
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSR 239
TA+ + G+++ K L++Q R
Sbjct: 564 QTAIQTMNGFQI-----GMKRLKVQLKR 586
>gi|344257423|gb|EGW13527.1| U2 small nuclear ribonucleoprotein B'' [Cricetulus griseus]
Length = 113
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ LP ++ + ++ +F F G+KEV L+ + FV+FEN A A
Sbjct: 41 LFLNNLPEETNEMMLSMLFNQFPGFKEVCLIPGRHDI--------AFVEFENDGQAGAAR 92
Query: 216 SALQGYRM 223
ALQG+++
Sbjct: 93 DALQGFKI 100
>gi|453413|emb|CAA54628.1| MSSP-2 [Homo sapiens]
Length = 389
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|297824185|ref|XP_002879975.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
gi|297325814|gb|EFH56234.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL+V GLP D RE+ ++FR F GY+ L + G P F F +
Sbjct: 45 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSD----GAKP--FAFAVFSDLQS 98
Query: 211 AATALSALQGYRMD 224
A T + AL G D
Sbjct: 99 AVTVMHALNGMVFD 112
>gi|356541768|ref|XP_003539345.1| PREDICTED: uncharacterized protein LOC100780983 [Glycine max]
Length = 338
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
TL+V GLP D RE+ ++FR F GY+ L S P F F + A A
Sbjct: 80 TLFVAGLPEDVKPREIYNLFREFPGYESSHL---RSPSNSSQP--FAFAVFASQKSAILA 134
Query: 215 LSALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
+ AL G D + + ++ L S + R+
Sbjct: 135 MHALNGLVFDLEKGSTLYIDLAKSNSRSKRT 165
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D +++ +F F ++ + K R G P FV+FE+ A A+
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFG-----KVTFVDLKNRRGPPF--AFVEFEDARDADDAV 61
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGARGRR 253
A GY D D LR++F R GP S G R R
Sbjct: 62 KARDGY-----DYDGYRLRVEFPRGGGPGSYRGNRNDR 94
>gi|313231398|emb|CBY08513.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYK--EVRLVIKESKLRGGDPL-ILCFVDFENPACA 211
TL+V GLP D +RE +F+ F G++ V+ ++ KL PL + F+ F + A
Sbjct: 45 TLFVSGLPQDVKEREFYLLFQGFSGFECAIVKQPVRNVKLPNNQPLGPVAFLTFASRKDA 104
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSR 239
TA G+ +D D+ ++++F++
Sbjct: 105 ETAKDKFHGFALDPQV-DNLVMKIEFAK 131
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D +++ +F F ++ + K R G P FV+FE+ A A+
Sbjct: 10 IYVGNLPPDIRTKDIQDLFHKFG-----KVTFVDLKNRRGPPF--AFVEFEDNRDADDAV 62
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGAR 250
A GY D D LR++F R GP S G+R
Sbjct: 63 KARDGY-----DYDGYRLRVEFPRGGGPGSYRGSR 92
>gi|115388597|ref|XP_001211804.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
gi|114195888|gb|EAU37588.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
Length = 812
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFENPAC 210
++TL+V+ L ++T +FRP G+ +L K R G L + FVDF A
Sbjct: 584 TATLFVKNLNFNTTNERFVDVFRPLDGFVSAKLKTKPDPKRPGQTLSMGFGFVDFRTKAQ 643
Query: 211 AATALSALQGYRMDE 225
A AL+A+ GY++D+
Sbjct: 644 AQAALAAMNGYKLDQ 658
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAAT 213
+ ++V+ L + + E+ IF F V ++ E G FV+FEN AA
Sbjct: 206 TNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDED----GKSRCFGFVNFENAEDAAR 261
Query: 214 ALSALQGYRMDEDD 227
A+ AL GY++D D
Sbjct: 262 AVEALNGYKLDNKD 275
>gi|169616726|ref|XP_001801778.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
gi|111060126|gb|EAT81246.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
Length = 830
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 144 ETLPLPPDA-SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCF 202
E P P A ++TLYV L +T + F+P G++ ++ K RG + F
Sbjct: 595 EEAPEPEAANTATLYVRNLNFTTTTERLTEAFKPLSGFRSAKVKTKVDPKRGVLSMGFGF 654
Query: 203 VDFENPACAATALSALQGYRMD 224
V+F + A+ AL + G+ ++
Sbjct: 655 VEFNSAETASAALRTMDGHDLE 676
>gi|270002453|gb|EEZ98900.1| hypothetical protein TcasGA2_TC004515 [Tribolium castaneum]
Length = 296
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 12/115 (10%)
Query: 118 PDLVQNLRSSSIDDQLPFDAAARP-----GHETLPLPPDASSTLYVEGLPADSTKREVAH 172
P + ++ ++S+ LP A A P L + STL+V L ++ E+
Sbjct: 156 PTALTSVHAASLPHFLPSPALASPVGSSSSQPGLGVSNPPCSTLFVANLGQFVSEHELKE 215
Query: 173 IFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDD 227
IF F G+ +R+ K GG P+ F+++++ CAA ++ALQG + D
Sbjct: 216 IFASFPGFCRLRMHNK-----GGSPV--AFMEYQDVRCAAQVMAALQGSFLLSSD 263
>gi|156054690|ref|XP_001593271.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980]
gi|154703973|gb|EDO03712.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 842
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFENPAC 210
++TL+V L +T + + +F+P G+ R+ K + G L + F++F +
Sbjct: 613 TTTLFVRNLNFSTTSQRLTEVFKPLDGFLSARVNTKTDPKKPGQVLSMGFGFIEFRTKSQ 672
Query: 211 AATALSALQGYRMD 224
A A+ A+ GY +D
Sbjct: 673 AQAAIKAMDGYTLD 686
>gi|426374017|ref|XP_004053879.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Gorilla gorilla gorilla]
Length = 963
Score = 40.4 bits (93), Expect = 0.76, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 859 MKMDGMTIKEN 869
>gi|158261441|dbj|BAF82898.1| unnamed protein product [Homo sapiens]
Length = 963
Score = 40.4 bits (93), Expect = 0.76, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 859 MKMDGMTIKEN 869
>gi|383873332|ref|NP_001244484.1| squamous cell carcinoma antigen recognized by T-cells 3 [Macaca
mulatta]
gi|355692773|gb|EHH27376.1| hypothetical protein EGK_17559 [Macaca mulatta]
gi|355786497|gb|EHH66680.1| hypothetical protein EGM_03721 [Macaca fascicularis]
gi|380786253|gb|AFE65002.1| squamous cell carcinoma antigen recognized by T-cells 3 [Macaca
mulatta]
gi|384950574|gb|AFI38892.1| squamous cell carcinoma antigen recognized by T-cells 3 [Macaca
mulatta]
Length = 963
Score = 40.4 bits (93), Expect = 0.76, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 859 MKMDGMTIKEN 869
>gi|452003034|gb|EMD95491.1| hypothetical protein COCHEDRAFT_1200551 [Cochliobolus
heterostrophus C5]
Length = 244
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 137 AAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGD 196
AAA P P + TL+++ +P D + ++ IF F G+KEVRLV +R
Sbjct: 157 AAAVPDEYVRP-----NKTLFLQNIPRDVDEDDLTSIFERFEGFKEVRLV----SVRA-- 205
Query: 197 PLILCFVDFENPACAATALSA 217
+ F +FEN A TA A
Sbjct: 206 ---VAFAEFENEQFAITAKEA 223
>gi|7661952|ref|NP_055521.1| squamous cell carcinoma antigen recognized by T-cells 3 [Homo
sapiens]
gi|74762140|sp|Q15020.1|SART3_HUMAN RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3; Short=hSART-3; AltName:
Full=Tat-interacting protein of 110 kDa; Short=Tip110
gi|961450|dbj|BAA09929.1| KIAA0156 [Homo sapiens]
gi|4996282|dbj|BAA78384.1| squamous cell carcinoma antigen SART-3 [Homo sapiens]
gi|62739971|gb|AAH93784.1| Squamous cell carcinoma antigen recognized by T cells 3 [Homo
sapiens]
gi|85567456|gb|AAI11984.1| Squamous cell carcinoma antigen recognized by T cells 3 [Homo
sapiens]
gi|119618223|gb|EAW97817.1| squamous cell carcinoma antigen recognised by T cells 3, isoform
CRA_b [Homo sapiens]
gi|168278527|dbj|BAG11143.1| squamous cell carcinoma antigen recognized by T-cells 3 [synthetic
construct]
Length = 963
Score = 40.4 bits (93), Expect = 0.77, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 859 MKMDGMTIKEN 869
>gi|444319050|ref|XP_004180182.1| hypothetical protein TBLA_0D01550 [Tetrapisispora blattae CBS 6284]
gi|387513224|emb|CCH60663.1| hypothetical protein TBLA_0D01550 [Tetrapisispora blattae CBS 6284]
Length = 420
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
+++ L+V P D + E+ IF PF KEV++ L G FV+FE P A
Sbjct: 105 STTRLFVRPFPFDVQESELNEIFAPFGAMKEVKI------LNG-----FAFVEFEEPESA 153
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSRNPGPR 244
+ A+ + G + D P L + FS+ P R
Sbjct: 154 SKAIEEVNG-KTFADQP----LEVLFSKLPAKR 181
>gi|332241740|ref|XP_003270038.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Nomascus leucogenys]
Length = 963
Score = 40.4 bits (93), Expect = 0.77, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 859 MKMDGMTIKEN 869
>gi|114646770|ref|XP_001163755.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 3 [Pan troglodytes]
gi|410209428|gb|JAA01933.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
gi|410253528|gb|JAA14731.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
gi|410290636|gb|JAA23918.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
gi|410350455|gb|JAA41831.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
Length = 963
Score = 40.4 bits (93), Expect = 0.77, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 859 MKMDGMTIKEN 869
>gi|426374019|ref|XP_004053880.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Gorilla gorilla gorilla]
Length = 927
Score = 40.4 bits (93), Expect = 0.77, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 767 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 822
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 823 MKMDGMTIKEN 833
>gi|402887557|ref|XP_003907156.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Papio anubis]
Length = 963
Score = 40.4 bits (93), Expect = 0.77, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 859 MKMDGMTIKEN 869
>gi|397525223|ref|XP_003832576.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Pan paniscus]
Length = 963
Score = 40.4 bits (93), Expect = 0.77, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 859 MKMDGMTIKEN 869
>gi|396465284|ref|XP_003837250.1| hypothetical protein LEMA_P034840.1 [Leptosphaeria maculans JN3]
gi|312213808|emb|CBX93810.1| hypothetical protein LEMA_P034840.1 [Leptosphaeria maculans JN3]
Length = 184
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+ TL+++ +P D + + ++F F G+KEVRLV S + F +FEN A
Sbjct: 108 NKTLFLQNIPRDVDEETLTNVFERFEGFKEVRLVSVRS---------VAFAEFENEQFAI 158
Query: 213 TALSA 217
TA A
Sbjct: 159 TAKEA 163
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
S T+YV LPAD + E+ +F YK R++ E K+ P CFV+FEN A
Sbjct: 6 SRTIYVGNLPADIRESEIEDLF-----YKYGRILDVELKI-PPRPPCYCFVEFENARDAE 59
Query: 213 TALSALQGYRMD 224
A+ GY D
Sbjct: 60 DAIRGRDGYNFD 71
>gi|167518960|ref|XP_001743820.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777782|gb|EDQ91398.1| predicted protein [Monosiga brevicollis MX1]
Length = 213
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 136 DAAARPGHETLPLPPDASST-------LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIK 188
D P + + + P A+++ +Y LP ++TK + +F G EVRLV
Sbjct: 114 DTNGEPPAKMIKMTPVATASEGTNNTIVYCSNLPQETTKEMLLALFGELKGLVEVRLV-- 171
Query: 189 ESKLRGGDPLILCFVDFENPACAATALSALQGYRMDED 226
G P I FV+F A A+SAL G+++D +
Sbjct: 172 -----EGRPDI-AFVEFSTEQEAGIAISALDGFQVDAE 203
>gi|219520657|gb|AAI43254.1| SART3 protein [Homo sapiens]
Length = 927
Score = 40.4 bits (93), Expect = 0.79, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 767 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 822
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 823 MKMDGMTIKEN 833
>gi|115620271|ref|XP_781643.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Strongylocentrotus purpuratus]
Length = 890
Score = 40.4 bits (93), Expect = 0.79, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L+V GLP T E+ F F K VR+V + G P L +VDFEN A A A+
Sbjct: 715 LFVSGLPRTLTTEELEKTFSKFGKLKGVRIV----TFKSGVPKGLAYVDFENEASATRAV 770
Query: 216 SALQGYRMDE 225
L ++ E
Sbjct: 771 MGLDNTQIGE 780
>gi|405965429|gb|EKC30805.1| RNA-binding motif, single-stranded-interacting protein 3
[Crassostrea gigas]
Length = 336
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 14/89 (15%)
Query: 154 STLYVEGLPADSTKREVAHIFRPFVGYKEVRLVI--KESKLRGGDPLILCFVDFENPACA 211
+ LY+ GL ++T +++ ++ +P+ + +I + +K +G FVDFE+P+ A
Sbjct: 26 TNLYIRGLNPNTTDKDLVNLCQPYGKIISTKAIIDQQTNKCKG-----YGFVDFESPSAA 80
Query: 212 ATALSALQGY-------RMDEDDPDSKFL 233
A+ ALQ + E DP + ++
Sbjct: 81 EVAVQALQSQGIQAQMAKQQEQDPTNLYI 109
>gi|397525225|ref|XP_003832577.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Pan paniscus]
Length = 927
Score = 40.4 bits (93), Expect = 0.80, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 767 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 822
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 823 MKMDGMTIKEN 833
>gi|392597982|gb|EIW87304.1| RNA binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 263
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 23/131 (17%)
Query: 116 TGPDLVQNLRS----SSIDDQLPFDAAARPGHETLP---LPPDASSTLYVEGLPADSTKR 168
T P L Q LR+ + ID A RP + +P LPP+ L+++ LP + K
Sbjct: 148 TNP-LKQKLRAKRMATDIDGAAAAPAVKRPNVQ-MPDEYLPPN--KILFLQNLPENVDKE 203
Query: 169 EVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDP 228
++ +F + EVRL+ + + FV+F + A A A AL Y++D ++
Sbjct: 204 QLTTLFTQYPNLHEVRLIPTKKDI--------AFVEFVDEASAGVAKDALHNYKLDGENK 255
Query: 229 DSKFLRLQFSR 239
+++ F+R
Sbjct: 256 ----IKITFAR 262
>gi|332241742|ref|XP_003270039.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Nomascus leucogenys]
Length = 927
Score = 40.4 bits (93), Expect = 0.80, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 767 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 822
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 823 MKMDGMTIKEN 833
>gi|255953987|ref|XP_002567746.1| Pc21g07040 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589457|emb|CAP95601.1| Pc21g07040 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 249
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP+ L++ LP D+T+ ++ IF F G++EVRLV R G + FV++E
Sbjct: 170 LPPN--KILFLRELPDDATQEGLSAIFGRFEGFQEVRLVPG----RKG----IAFVEYEA 219
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRN 240
A A +A A G M + K +R+ + R
Sbjct: 220 EAGAISAKEATSGMPMGD---QGKAIRVTYQRQ 249
>gi|114646772|ref|XP_001163651.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Pan troglodytes]
Length = 927
Score = 40.4 bits (93), Expect = 0.80, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 767 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 822
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 823 MKMDGMTIKEN 833
>gi|154280340|ref|XP_001540983.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412926|gb|EDN08313.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 675
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL--CFVDFEN 207
P +STL+V L +T + +F+P G+ R+ K R G+ L + FV+F
Sbjct: 441 PLETSTLFVRNLNFSTTNARLTEVFQPLDGFLSARVKTKADPKRPGETLSMGFGFVEFRT 500
Query: 208 PACAATALSALQGYRMDEDD 227
A A AL+ +QGY++D+ +
Sbjct: 501 AAQARAALATMQGYKLDQHE 520
>gi|119631790|gb|EAX11385.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_c [Homo sapiens]
Length = 346
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|402887559|ref|XP_003907157.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Papio anubis]
Length = 927
Score = 40.0 bits (92), Expect = 0.83, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 767 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 822
Query: 216 SALQGYRMDED 226
+ G + E+
Sbjct: 823 MKMDGMTIKEN 833
>gi|339522363|gb|AEJ84346.1| RNA-binding motif single-stranded-interacting protein 1 [Capra
hircus]
Length = 418
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP ++T ++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 59 SKTNLYIRGLPPNTTDQDRVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 113
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 114 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 144
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
AS TLYV LP D +REV +F + ++ L I P CF++FE+ A
Sbjct: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPR------PPGYCFIEFEDARDA 58
Query: 212 ATALSALQGYRMD 224
A+ GY D
Sbjct: 59 EDAIRGRDGYNFD 71
>gi|428671090|gb|EKX72009.1| U1 snRNP protein, putative [Babesia equi]
Length = 294
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 138 AARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDP 197
A R G + P+ P+ TL+VE LP T +V +F GY E R++
Sbjct: 208 AQRRGGFSAPVIPN--RTLFVESLPEGVTTNDVISLFCRMPGYIEARVIPARK------- 258
Query: 198 LILCFVDFENPACAATALSALQGYRMD 224
+ FVDF+N + A+ LQG ++
Sbjct: 259 --VAFVDFDNDMNSGYAMQTLQGQTIN 283
>gi|7446349|pir||S72368 single-stranded DNA-binding protein MSSP1 - human
gi|1139533|dbj|BAA11561.1| MSSP-1 [Homo sapiens]
Length = 373
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ ++ ++ K +G FVDF++PA
Sbjct: 27 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTNAILHKTTNKCKG-----YGFVDFDSPA 81
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 112
>gi|331218892|ref|XP_003322123.1| hypothetical protein PGTG_03660 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301113|gb|EFP77704.1| hypothetical protein PGTG_03660 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 311
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D + L++EGLPA+ T +A +F+ + G++ VRLV R G + FV ++ A
Sbjct: 233 DPNPVLFLEGLPAEVTDDMMAVLFQQYPGFQSVRLVPG----RTG----IAFVQYDTAAQ 284
Query: 211 AATALSALQGYRM 223
+ A +AL G+++
Sbjct: 285 SDMAKAALDGFKL 297
>gi|451856476|gb|EMD69767.1| hypothetical protein COCSADRAFT_155918 [Cochliobolus sativus
ND90Pr]
Length = 244
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 137 AAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGD 196
AAA P P + TL+++ +P D + ++ IF F G+KEVRLV +R
Sbjct: 157 AAAVPDEYVRP-----NKTLFLQNIPRDVDEDDLTTIFERFEGFKEVRLV----SVRA-- 205
Query: 197 PLILCFVDFENPACAATALSA 217
+ F +FEN A TA A
Sbjct: 206 ---VAFAEFENEQFAITAKEA 223
>gi|402220077|gb|EJU00150.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 276
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
LPP+ L+++ LP +T ++ +F + G EVRLV + + FV++ +
Sbjct: 198 LPPN--KILFLQNLPDSTTLDQLQMLFSQYPGLHEVRLVPTKKD--------IAFVEYVD 247
Query: 208 PACAATALSALQGYRMD 224
A+TA AL YR+D
Sbjct: 248 ENAASTAKDALHNYRLD 264
>gi|388516627|gb|AFK46375.1| unknown [Medicago truncatula]
Length = 314
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+TL++ L + + EV +F G+K+++++ +E +CF++FE+ A
Sbjct: 209 CNTLFIGNLGENINEEEVRGLFSVQPGFKQMKIIRQERH-------TVCFIEFEDVNSAT 261
Query: 213 TALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGAR 250
LQG + S +R+Q+S+NP FG R
Sbjct: 262 NVHHNLQGAVIPSS--GSIGMRIQYSKNP-----FGKR 292
>gi|326532978|dbj|BAJ89334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 144 ETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFV 203
E L P D TL++ GLPAD REV ++FR F GY + G F
Sbjct: 58 EPLAPPRDELRTLFIAGLPADVKPREVYNLFRDFPGY------VSSHVRSGKSAQSYAFA 111
Query: 204 DFENPACAATALSALQGYRMD 224
F + A A+SA G D
Sbjct: 112 VFGDQPSALAAVSATNGLVFD 132
>gi|296212815|ref|XP_002752998.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Callithrix jacchus]
Length = 963
Score = 40.0 bits (92), Expect = 0.88, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEEICKVHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 858
Query: 216 SALQGYRMDE--------DDPDSKFLRLQFSRN------PGPRSVFGARGR 252
+ G + E + P K +R P P++ +GARG+
Sbjct: 859 MKMDGMTIKENVIKVAISNPPQRKVPEKPEARKASGGPMPSPQT-YGARGK 908
>gi|195389855|ref|XP_002053589.1| GJ23264 [Drosophila virilis]
gi|194151675|gb|EDW67109.1| GJ23264 [Drosophila virilis]
Length = 274
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 164 DSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRM 223
D+ RE+ +FR + GY+ L + + P+ FV F A A A LQG R
Sbjct: 2 DAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPV--GFVTFHTRAGAEAAKQDLQGVRF 59
Query: 224 DEDDPDSKFLRLQFSRN 240
D D P + +RL+F+++
Sbjct: 60 DPDMPQT--IRLEFAKS 74
>gi|413922541|gb|AFW62473.1| hypothetical protein ZEAMMB73_312737, partial [Zea mays]
Length = 393
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 129 IDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIK 188
+ D LPF ++ P + + P D + +YV LP ++T+ ++ F+ F K+ + ++
Sbjct: 286 VKDVLPF--SSNPENGNIQEPEDDAHAIYVRNLPLNATETQLEDEFKKFGTIKQNGIQVR 343
Query: 189 ESKLRGGDPLILCFVDFENPACAATALSA 217
+K++G FV+FE+ +A+ A
Sbjct: 344 SNKIQG---FCYGFVEFEDSTSVQSAIEA 369
>gi|268534002|ref|XP_002632131.1| Hypothetical protein CBG06987 [Caenorhabditis briggsae]
Length = 138
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
LPP+ + LY++ LP T E+ IF F +++R V ++ RG FV +E
Sbjct: 12 KLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIR-VGNTAETRG-----TAFVVYE 65
Query: 207 NPACAATALSALQGYRM 223
+ A TA L GY +
Sbjct: 66 DIFDAKTACEHLSGYNV 82
>gi|453086560|gb|EMF14602.1| multiple RNA-binding domain-containing protein 1 [Mycosphaerella
populorum SO2202]
Length = 828
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 109 VTGRHGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKR 168
V + + P+ V L +S + D D A S+TL+V L +T
Sbjct: 569 VDEQSAQSTPEGVSKLSTSELKDSTVADTAG-------------SATLFVRNLNFSTTTS 615
Query: 169 EVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSALQGYRMD 224
+ F+P G+ R+ ++ RG + F++F+ P A AL A+ GY ++
Sbjct: 616 LLTETFKPLDGFLNARVKMRTDPKRGQLSMGFGFLEFQTPKHAQAALQAMDGYSLE 671
>gi|308461026|ref|XP_003092810.1| hypothetical protein CRE_22109 [Caenorhabditis remanei]
gi|308252474|gb|EFO96426.1| hypothetical protein CRE_22109 [Caenorhabditis remanei]
gi|341896793|gb|EGT52728.1| hypothetical protein CAEBREN_08400 [Caenorhabditis brenneri]
Length = 138
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
LPP+ + LY++ LP T E+ IF F +++R V ++ RG FV +E
Sbjct: 12 KLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIR-VGNTAETRG-----TAFVVYE 65
Query: 207 NPACAATALSALQGYRM 223
+ A TA L GY +
Sbjct: 66 DIFDAKTACEHLSGYNV 82
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPA 209
PD + +YV LP++ +RE+ F F K R +K RG + FV+FE+P
Sbjct: 4 PDENGRVYVGNLPSECDQREIEEEFEKFGKIK--RCDVK----RGANGSSFAFVEFEDPR 57
Query: 210 CAATALSALQGYRM 223
A A+ GY
Sbjct: 58 DAKDAIKEKDGYEF 71
>gi|225443274|ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
Length = 328
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 19/119 (15%)
Query: 141 PGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL 200
P T PP +TL++ L + + E+ +F G+K+++++ +E +
Sbjct: 213 PVQNTKDNPP--CNTLFIGNLGENINEEELRGLFSVQPGFKQMKILRQERH-------TV 263
Query: 201 CFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNP--------GPRSVFGARG 251
CF++FE+ A +LQG + S +R+Q+S+NP P +V GA G
Sbjct: 264 CFIEFEDMNTATNVHHSLQGAVIPSS--GSVGMRIQYSKNPFGKRKDSGHPVAVAGANG 320
>gi|116781079|gb|ABK21958.1| unknown [Picea sitchensis]
Length = 94
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 194 GGDPLILCFVDFENPACAATALSALQGYRMDEDDPDS 230
GG+P +LCFV+F + CA TA+SAL+ + P S
Sbjct: 46 GGEPYVLCFVEFIDAKCALTAISALKECLWNIWHPSS 82
>gi|195123295|ref|XP_002006143.1| GI18722 [Drosophila mojavensis]
gi|193911211|gb|EDW10078.1| GI18722 [Drosophila mojavensis]
Length = 248
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVI--KESKLRGGDPLILCFVDFEN 207
P AS + V GL ++T+++V +F F + +++VI + + RG CF+ FEN
Sbjct: 79 PQASRCIGVFGLNTNTTEQKVRELFNKFGPIQRIQMVIDAQTHRSRG-----FCFIYFEN 133
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFS 238
+ A A A G D D + +R+ +S
Sbjct: 134 LSDARVAKDACTGM-----DVDGRRIRVDYS 159
>gi|269849649|sp|Q7SXP4.2|SRS1A_DANRE RecName: Full=Serine/arginine-rich splicing factor 1A; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1A
gi|157423199|gb|AAI53597.1| Sfrs1l protein [Danio rerio]
gi|157423322|gb|AAI53598.1| Sfrs1l protein [Danio rerio]
Length = 257
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D ++V +F + +++ L RGG P FV+FE+P A A+
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDL----KNRRGGPPF--AFVEFEDPRDAEDAV 70
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRN 240
A GY D D LR++F R+
Sbjct: 71 YARDGY-----DYDGYRLRVEFPRS 90
>gi|47087630|ref|NP_998180.1| serine/arginine-rich splicing factor 1A [Danio rerio]
gi|33416587|gb|AAH55511.1| Splicing factor, arginine/serine-rich 1, like [Danio rerio]
Length = 245
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D ++V +F + +++ L RGG P FV+FE+P A A+
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDL----KNRRGGPPF--AFVEFEDPRDAEDAV 70
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRN 240
A GY D D LR++F R+
Sbjct: 71 YARDGY-----DYDGYRLRVEFPRS 90
>gi|428182625|gb|EKX51485.1| hypothetical protein GUITHDRAFT_159319 [Guillardia theta CCMP2712]
Length = 237
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
+ L++E LP + + +F+ F G EVR+V ++ + FV+FE+ A AA
Sbjct: 161 NKILFLERLPDEINVEMLQTLFKQFPGLAEVRMVPGKTGI--------AFVEFESDAQAA 212
Query: 213 TALSALQGYRM 223
TA LQG+++
Sbjct: 213 TARDTLQGFKL 223
>gi|403415768|emb|CCM02468.1| predicted protein [Fibroporia radiculosa]
Length = 1020
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 116 TGPDLVQNLRSSSIDDQLPFDA-AARPGHETLPLPPDASS-TLYVEGLPADSTKREVAHI 173
T + L ++D LP + + P + DA+ +YV GL TK+++ +
Sbjct: 744 TSAEAALELHKQELEDGLPLNVYISNPERKKERTDSDANDREIYVAGLSRFVTKKDLETL 803
Query: 174 FRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATALSA 217
FR + KEVR+ + + G P F++FE A+ ALSA
Sbjct: 804 FRTYGTVKEVRMALDPN----GRPKGFAFIEFEQEQDASAALSA 843
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D +++ +F F ++ + K R G P FV+FE+ A A+
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFG-----KVTFVDLKNRRGPPF--AFVEFEDARDADDAV 61
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGAR 250
A GY D D LR++F R GP S G R
Sbjct: 62 KARDGY-----DYDGYRLRVEFPRGGGPGSYRGNR 91
>gi|255576924|ref|XP_002529347.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223531167|gb|EEF33014.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 218
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFEN 207
+ D +++YV LP +T+ + +F P+ V+ +I + RG CFV F N
Sbjct: 1 MRVDDDNSIYVGSLPYSATEDTIRRVFGPYGSIVSVK-IINDHGTRG---KCYCFVTFRN 56
Query: 208 PACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVF 247
P + A++ + G + D + +R+ G R+ F
Sbjct: 57 PRSVSDAINDMNGKTI-----DGRVVRVNGVTTRGGRTDF 91
>gi|170044495|ref|XP_001849881.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867621|gb|EDS31004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 393
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 139 ARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGD-P 197
ARP E + + LY+ GLP T+ E+ IFRP+ R+++++ G D P
Sbjct: 153 ARPSSEGI-----KGANLYISGLPKTITQEELEIIFRPYGEIITSRVLVQD----GNDKP 203
Query: 198 LILCFVDFENPACAATALSALQGYR-MDEDDPDSKFLRLQFSRNPGPRS 245
+ F+ F+ A A++AL G DP + ++FS PG S
Sbjct: 204 KGVGFIRFDQRKEAERAIAALNGTTPKGLTDP----ITVKFSNTPGQNS 248
>gi|2673920|gb|AAB88654.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 158
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL+V GLP D RE+ ++FR F GY+ L + G P F F +
Sbjct: 32 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSD----GAKP--FAFAVFSDLQS 85
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFG 248
A + AL G D + + + L S RS G
Sbjct: 86 AVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTG 123
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D +++ +F F ++ + K R G P FV+FE+ A A+
Sbjct: 10 IYVGNLPPDIRTKDIQDLFHKFG-----KVTFVDLKNRRGPPF--AFVEFEDARDADDAV 62
Query: 216 SALQGYRMDEDDPDSKFLRLQFSRNPGPRSVFGAR 250
A GY D D LR++F R GP S G+R
Sbjct: 63 KARDGY-----DYDGYRLRVEFPRGGGPGSYRGSR 92
>gi|396480635|ref|XP_003841040.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
gi|312217614|emb|CBX97561.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
Length = 831
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
++TL+V L +T + F+P G++ ++ K RG + FV+F N A
Sbjct: 605 TATLFVRNLNFTTTSERLTEAFKPLSGFRSAKVKTKIDPKRGVLSMGFGFVEFTNAETAT 664
Query: 213 TALSALQGYRMD 224
AL + G+ ++
Sbjct: 665 AALRTMDGHDLE 676
>gi|50303265|ref|XP_451574.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640706|emb|CAH01967.1| KLLA0B00979p [Kluyveromyces lactis]
Length = 342
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
+ + L+V+ P D T E+ IF PF KE+++ L G FV+FE A
Sbjct: 50 SDTRLFVKPFPPDVTDAEMKEIFEPFGALKEIKI------LNG-----FAFVEFEEAESA 98
Query: 212 ATALSALQGYRMDEDDPDSKFLRLQFSRNPGPR 244
+ A+ + G +M D P L + FS+ PR
Sbjct: 99 SQAIQNVAG-KMFADYP----LEVVFSKKLKPR 126
>gi|413922542|gb|AFW62474.1| hypothetical protein ZEAMMB73_312737 [Zea mays]
Length = 409
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 129 IDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIK 188
+ D LPF ++ P + + P D + +YV LP ++T+ ++ F+ F K+ + ++
Sbjct: 287 VKDVLPF--SSNPENGNIQEPEDDAHAIYVRNLPLNATETQLEDEFKKFGTIKQNGIQVR 344
Query: 189 ESKLRGGDPLILCFVDFENPACAATALSA 217
+K++G FV+FE+ +A+ A
Sbjct: 345 SNKIQG---FCYGFVEFEDSTSVQSAIEA 370
>gi|71984310|ref|NP_493659.3| Protein C50D2.5 [Caenorhabditis elegans]
gi|82592517|sp|Q8ITY4.2|PM14_CAEEL RecName: Full=Pre-mRNA branch site p14-like protein
gi|351050745|emb|CCD65337.1| Protein C50D2.5 [Caenorhabditis elegans]
Length = 138
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 147 PLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFE 206
LPP+ + LY++ LP T E+ IF F +++R V ++ RG FV +E
Sbjct: 12 KLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIR-VGNTAETRG-----TAFVVYE 65
Query: 207 NPACAATALSALQGYRM 223
+ A TA L GY +
Sbjct: 66 DIFDAKTACEHLSGYNV 82
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATA 214
T+YV LP++ ++E+ IF Y E+R + + K R D F+ F++ A A
Sbjct: 5 TVYVGNLPSNVREKEIEDIFHK---YGEIRNI--DIKSRSRDSPAFAFIQFDDRRDAKEA 59
Query: 215 LSALQGYRMDEDDPDSKFLRLQF 237
+ A GY D K LR++F
Sbjct: 60 VRARDGYEF-----DGKRLRVEF 77
>gi|390468140|ref|XP_003733891.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Callithrix jacchus]
Length = 927
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
L++ GLP TK E+ I + K++RLV R G P L +V++EN + A+ A+
Sbjct: 767 LFISGLPFSCTKEELEEICKVHGTVKDLRLVTN----RAGKPKGLAYVEYENESQASQAV 822
Query: 216 SALQGYRMDE--------DDPDSKFLRLQFSRN------PGPRSVFGARGR 252
+ G + E + P K +R P P++ +GARG+
Sbjct: 823 MKMDGMTIKENVIKVAISNPPQRKVPEKPEARKASGGPMPSPQT-YGARGK 872
>gi|226488853|emb|CAX74776.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
Length = 333
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP DS + ++ +F F GY+EVR+V + FV+F N
Sbjct: 256 PPN--KILFLTNLPDDSDEAMLSMLFGQFTGYREVRMVPGRHD--------IAFVEFGNE 305
Query: 209 ACAATALSALQGYRM 223
A+ A LQG+ +
Sbjct: 306 VEASAAKLGLQGFNI 320
>gi|195431461|ref|XP_002063759.1| GK15735 [Drosophila willistoni]
gi|194159844|gb|EDW74745.1| GK15735 [Drosophila willistoni]
Length = 277
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 150 PDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPA 209
P AS + V GL ++T+ +V +F F + +++VI R CF+ +EN +
Sbjct: 100 PQASRCIGVFGLNTNTTQHQVRELFNKFGPIERIQMVIDAHTHRSRG---FCFIYYENLS 156
Query: 210 CAATALSALQGYRMDE 225
A A A G ++D+
Sbjct: 157 DARVAKDACSGIKVDD 172
>gi|226469924|emb|CAX70243.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
gi|226488855|emb|CAX74777.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
Length = 333
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 149 PPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENP 208
PP+ L++ LP DS + ++ +F F GY+EVR+V + FV+F N
Sbjct: 256 PPN--KILFLTNLPDDSDEAMLSMLFGQFTGYREVRMVPGRHD--------IAFVEFGNE 305
Query: 209 ACAATALSALQGYRM 223
A+ A LQG+ +
Sbjct: 306 VEASAAKLGLQGFNI 320
>gi|390439660|ref|ZP_10228043.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
gi|389836940|emb|CCI32167.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
Length = 97
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 155 TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVI-KESKLRGGDPLILCFVDFENPACAAT 213
++YV LP + + +V +F + K V L I +E+K + G FV+ E PA +
Sbjct: 2 SIYVGNLPFEVNQEDVVEVFTEYGKIKRVHLPIDRETKKKRG----FAFVEMETPAQESA 57
Query: 214 ALSALQGYRMDEDDPDSKFLRLQFSRNPGPRSVF--GARGR 252
A++AL G + + L++ +R PR F G RGR
Sbjct: 58 AIAALNG-----AEWMGRELKVNQAREKEPRPSFAGGDRGR 93
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 156 LYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAATAL 215
+YV LP D R++ +F YK ++ + K R G P CFV+FE+P A+ A+
Sbjct: 9 VYVGNLPPDIRARDIEDLF-----YKFGKIAFVDLKTRRGPPF--CFVEFEDPRDASDAV 61
Query: 216 SALQGYRMD 224
GY D
Sbjct: 62 HERDGYNYD 70
>gi|312372120|gb|EFR20150.1| hypothetical protein AND_20571 [Anopheles darlingi]
Length = 216
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 136 DAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGG 195
+ A T PP+ L++ LP ++ + ++ +F F G+KEVRLV
Sbjct: 126 EVGATNNSATAEQPPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHD---- 179
Query: 196 DPLILCFVDFENPACAATALSALQGYRM 223
+ FV+F + + A ALQG+++
Sbjct: 180 ----IAFVEFASEVQSGAAREALQGFKI 203
>gi|147802946|emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL++ GLP D RE+ ++FR F GY+ L S + P F F +
Sbjct: 75 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL---RSPSQNSQP--FAFAVFLDQQS 129
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
A + AL G D + + ++ L S + RS
Sbjct: 130 AIATMHALNGMVFDLEKGSTLYIDLAKSNSRSKRS 164
>gi|28207150|gb|AAO37215.1| hypothetical protein [Arabidopsis thaliana]
Length = 277
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL++ + + T+ E+ +F G+ ++ K++G + FVDF++ +C
Sbjct: 187 DPCPTLFIANMGPNCTEAELIQVFSRCRGFLKL-------KIQGTYGTPVAFVDFQDVSC 239
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRN 240
++ AL LQG + + LRLQ++R+
Sbjct: 240 SSEALHTLQGTVL-YSSLTGEVLRLQYARS 268
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 151 DASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPAC 210
D TL+V GLP D RE+ ++FR F GY+ L + G P F F +
Sbjct: 32 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSD----GAKP--FAFAVFSDLQS 85
Query: 211 AATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
A + AL G D + + + L S RS
Sbjct: 86 AVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRS 120
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACA 211
AS T+YV LP D +RE+ +F YK R+V + KL P CF++FE+ A
Sbjct: 5 ASRTIYVGNLPGDVREREIEDLF-----YKYGRIVDIDLKLPPRPPG-YCFIEFEDGRDA 58
Query: 212 ATALSALQGYRMD 224
A+ GY D
Sbjct: 59 EDAIRGRDGYNFD 71
>gi|85117951|ref|XP_965346.1| hypothetical protein NCU02959 [Neurospora crassa OR74A]
gi|28927154|gb|EAA36110.1| hypothetical protein NCU02959 [Neurospora crassa OR74A]
Length = 606
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
S+ L++ +P ++T E+ +IF G K+VR+ + + G P DF + A
Sbjct: 439 SACLFIGNIPYETTDAELNNIFVGIDGLKDVRVAVDRAT---GWPRGFAHADFVDVEAAV 495
Query: 213 TALSALQGYRMDE 225
AL LQG ++ E
Sbjct: 496 NALEKLQGTQLGE 508
>gi|449525690|ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Cucumis sativus]
Length = 306
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 146 LPLPPDASS-----TLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLIL 200
LPL P +S TL++ GLP D RE+ ++FR F GY+ L + + P
Sbjct: 55 LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL---RTPTQTTQP--F 109
Query: 201 CFVDFENPACAATALSALQGYRMDEDDPDSKFLRLQFSRNPGPRS 245
F F + A A+ A+ G D + ++ L S + R+
Sbjct: 110 AFAVFSDQQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRT 154
>gi|313247153|emb|CBY35974.1| unnamed protein product [Oikopleura dioica]
Length = 414
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 36/191 (18%)
Query: 61 TIGSAYDRYLQS--AQYSSFTSGEASAFSGDRLRRAVP---GGVTRLPVS--DPSVTG-R 112
++ +AYD L AQ + ++ A+A G VP GG T++P+S PS+
Sbjct: 240 SLQTAYDSTLAQYQAQTADLSTLAATAAYGGYQFVMVPNPAGGYTQVPLSCGGPSMAALN 299
Query: 113 HGATGPDLVQNLRSSSIDDQLPFDAAARPGHETLPLPPDASSTLYVEGLPADSTKREVAH 172
P N S + + F+ + LP P + L++ LP + T ++A+
Sbjct: 300 QNPCAPQREGNFHSLVLHN---FN-------KLLPGPDGCN--LFIYHLPQEFTDADLAN 347
Query: 173 IFRPFVGYKEVRLVI----KESKLRGGDPLILCFVDFENPACAATALSALQGYRMDEDDP 228
IF PF ++ I +SK G FV ++N AA A++++ G+++
Sbjct: 348 IFAPFGAVISAKVFIDRATNQSKCFG-------FVSYDNAPSAANAITSMNGFQIGM--- 397
Query: 229 DSKFLRLQFSR 239
K L++Q R
Sbjct: 398 --KRLKVQLKR 406
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 153 SSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKESKLRGGDPLILCFVDFENPACAA 212
S ++YV LP D + E+ IF YK R+V E K+ P CFV+FE+ A
Sbjct: 6 SRSIYVGNLPGDIREHEIEDIF-----YKYGRIVDIELKV-PPRPPCYCFVEFEHSRDAE 59
Query: 213 TALSALQGYRMD 224
A+ GY +D
Sbjct: 60 DAIKGRDGYNLD 71
>gi|390464467|ref|XP_002749450.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like, partial [Callithrix jacchus]
Length = 213
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 152 ASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRLVIKES--KLRGGDPLILCFVDFENPA 209
+ + LY+ GLP +T +++ + +P+ + ++ ++ K +G FVDF++PA
Sbjct: 60 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKG-----YGFVDFDSPA 114
Query: 210 CAATALSAL-------QGYRMDEDDPDSKFL 233
A A+SAL Q + E DP + ++
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYI 145
>gi|384247265|gb|EIE20752.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 129
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 148 LPPDASSTLYVEGLPADSTKREVAHIFRPFVGYKEVRL-VIKESKLRGGDPLILCFVDFE 206
LPP+ + LYV LP + + E+ IF F G +++RL KE+ RG +V +E
Sbjct: 10 LPPEVNRVLYVRNLPFNISSEEMYDIFGKFGGVRQIRLGTSKET--RG-----TAYVVYE 62
Query: 207 NPACAATALSALQGYRM 223
+ A TA+ L G+ +
Sbjct: 63 DIYDAKTAVDHLSGFNV 79
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,321,419,167
Number of Sequences: 23463169
Number of extensions: 179680561
Number of successful extensions: 439126
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 1210
Number of HSP's that attempted gapping in prelim test: 437521
Number of HSP's gapped (non-prelim): 1832
length of query: 253
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 114
effective length of database: 9,097,814,876
effective search space: 1037150895864
effective search space used: 1037150895864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)