BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025390
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 75/120 (62%), Gaps = 3/120 (2%)
Query: 54 ILCLVLLMQKSEAREFLIGGKGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASGQDS 113
+L L L S AR+F +GG G W T N NY W+ KNRF + D++ F YA G DS
Sbjct: 16 LLSLSTLFTISNARKFNVGGSGAWVT---NPPENYESWSGKNRFLVHDTLYFSYAKGADS 72
Query: 114 VLQVNKDAYTNCSTEYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIVLADR 173
VL+VNK Y C+T+ P+ R DG + + + GP+YFISGN+DNC +KL V+V++ R
Sbjct: 73 VLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISAR 132
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 101/166 (60%), Gaps = 14/166 (8%)
Query: 52 LGILCLVLLMQKSEAREFLIGGK-GNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASG 110
+ I L+ L + A E +GGK G+W P +++ ++ +WA+K RF++GD IVF+Y SG
Sbjct: 14 VAIFSLIFLFSLAAANEVTVGGKSGDWKIPP-SSSYSFTEWAQKARFKVGDFIVFRYESG 72
Query: 111 QDSVLQVNKDAYTNCSTEYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIVL 170
+DSVL+V K+AY +C+T P+A YTDG T +SGP+YFISG +C +KL+++V+
Sbjct: 73 KDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVI 132
Query: 171 ADRSNHLSNTTTGMSPSSPPSPSTDVVPAPAPAGEYSPPEGTVEVN 216
+ R + + SP+ P D PA APA P G+V +
Sbjct: 133 SPRHSVI-------SPAPSPVEFED-GPALAPA----PISGSVRLG 166
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 81/120 (67%), Gaps = 2/120 (1%)
Query: 55 LCLVLLMQKSEAREFLIGGK-GNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASGQDS 113
L LL ++E ++GGK +W P+ + + N+WAE RF++GD++V+KY +DS
Sbjct: 12 LIFFLLTNLVCSKEIIVGGKTSSWKIPSSPSE-SLNKWAESLRFRVGDTLVWKYDEEKDS 70
Query: 114 VLQVNKDAYTNCSTEYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIVLADR 173
VLQV KDAY NC+T P A Y++G T ++SGPY+FISG+K NCV EKL ++V++ R
Sbjct: 71 VLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSR 130
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 52 LGILCLVLLMQKSEAREFLIGGKGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASG- 110
+ +L LV + SEA F GG+ W + ++N WAE+NRFQ+ D+IVF +
Sbjct: 14 MAVLGLVAVFSSSEAYVFYAGGRDGW---VVDPAESFNYWAERNRFQVNDTIVFLHDDEV 70
Query: 111 QDSVLQVNKDAYTNCSTEYPVARYTD---GHTVFTFKQSGPYYFISGNKDNCVNNEKLAV 167
SVLQV + + CST PV R D G +VF F +SGP++FISG++D C +KL +
Sbjct: 71 GGSVLQVTEGDFDTCSTGNPVQRLEDVAAGRSVFRFDRSGPFFFISGDEDRCQKGQKLYI 130
Query: 168 IVLADR 173
IV+A R
Sbjct: 131 IVMAVR 136
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Query: 49 IRALGILCLVLLMQKSEAREFLIGGKGN-WGTPTDNTTLNYNQWAEKNRFQIGDSIVFKY 107
I + I + LL+ SE+ ++LIG N W P + + +WA + F +GD+I+F+Y
Sbjct: 7 ILLMIIFSMWLLISHSESTDYLIGDSHNSWKVPLPSRR-AFARWASAHEFTVGDTILFEY 65
Query: 108 ASGQDSVLQVNKDAYTNCSTEYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAV 167
+ +SV +VN+ Y C T + DG+T + G Y+FISG K +C KLAV
Sbjct: 66 DNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRHCKMGLKLAV 125
Query: 168 IV 169
+V
Sbjct: 126 VV 127
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 49 IRALGILCLVLLMQKSEAREFLIGGKGN-WGTPTDNTTLNYNQWAEKNRFQIGDSIVFKY 107
I + I + +L+ SE+ ++L+G N W P T +WA +F +GD+I F+Y
Sbjct: 7 ILLMFIFSIWMLISYSESTDYLVGDSENSWKFPLP-TRHALTRWASNYQFIVGDTITFQY 65
Query: 108 ASGQDSVLQVNKDAYTNCSTEYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAV 167
+ +SV +V ++ Y C + DG+T+ K++G ++FISG K +C KLAV
Sbjct: 66 NNKTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRLGLKLAV 125
Query: 168 IVLA 171
+V+
Sbjct: 126 VVMV 129
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 52 LGILCLVLLMQKSEAREFLIGG-KGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASG 110
L +L + LL+ SEA ++++GG + +W P + + WA +RF+IGD+++FKY
Sbjct: 12 LVMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKPD-SLSHWANSHRFKIGDTLIFKYEKR 70
Query: 111 QDSVLQVNKDAYTNCST--EYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVI 168
+SV + N+ Y C+T +Y + + G+T + G +FISGN+ +C KLAV+
Sbjct: 71 TESVHEGNETDYEGCNTVGKYHIV-FNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVL 129
Query: 169 VLA 171
V++
Sbjct: 130 VIS 132
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 67 REFLIGGKGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASGQDSVLQVNKDAYTNCS 126
++ +G W P D Y WA F++GD + F +A+G+ V V++ A+ NC
Sbjct: 23 EDYDVGDDTEWTRPMDPE--FYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCE 80
Query: 127 TEYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIVLADRSNHLSNTTTGMSP 186
E P++ T +GP YFI D+C +KL++ V+A + + G +P
Sbjct: 81 KEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGATGGATPGAGATP 140
Query: 187 SSPPSPS 193
+ +PS
Sbjct: 141 APGSTPS 147
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 78 GTPTDNTTL---NYNQWAEKNRFQIGDSIVFKYASGQDSVLQVNKDAYTNCSTEYPVARY 134
G T TTL +Y +WA N+F +GDS++F Y + +VLQV+++ + +C++ P A Y
Sbjct: 7 GDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASY 66
Query: 135 TDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIV 169
T G K+ G +YF+ G +C +K+ + V
Sbjct: 67 TSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 67 REFLIGGKGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASGQDSVLQVNKDAYTNCS 126
++ +GG W P+D Y WA F++GD + F +A+G V V KDA+ NC
Sbjct: 1 EDYDVGGDMEWKRPSDPKF--YITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCK 58
Query: 127 TEYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIVL 170
E P++ T +GP Y+I D+C +KL++ V+
Sbjct: 59 KENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVV 102
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 66 AREFLIGGKGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASGQDSVLQVNKDAYTNC 125
A+++ +G W N +NY WA+ F +GD + F + Q ++L+VNK Y C
Sbjct: 26 AKKYTVGENKFW-----NPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGC 80
Query: 126 STEYPVARYTD--GHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIV 169
++P+ +T G + T Q+ YY + G K C KL+V V
Sbjct: 81 IADHPIRNWTRGAGRDIVTLNQTKHYYLLDG-KGGCYGGMKLSVKV 125
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 54 ILCLVLLMQK----SEAREFLIGGKGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYAS 109
+LC +L + S A + +G W D Y+ WA F +GDS+VF Y +
Sbjct: 8 VLCFLLAIINMALPSLATVYTVGDTSGWVIGGD-----YSTWASDKTFAVGDSLVFNYGA 62
Query: 110 GQDSVLQVNKDAYTNCSTEYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIV 169
G +V +V + Y +C++ ++ + G T K++G +YFI G + KL++ V
Sbjct: 63 GAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKV 122
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 84 TTLNYNQWAEKNRFQIGDSIVFKYASGQDSVLQVNKDAYTNCSTEYPVARYTDGHTVFTF 143
T ++Y+ WA F++GD + FKY S +V V+K Y C ++DG T
Sbjct: 38 TGVDYSGWATGKTFRVGDILEFKYGSSH-TVDVVDKAGYDGCDASSSTENHSDGDTKIDL 96
Query: 144 KQSGPYYFISGNKDNCVNNE--KLAVIVLA 171
K G YFI +C N KLAV V+A
Sbjct: 97 KTVGINYFICSTPGHCRTNGGMKLAVNVVA 126
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2
Length = 129
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 12/132 (9%)
Query: 43 GSRCGAIRALGILCLV--LLMQKS--EAREFLIGGKGNWGTPTDNTTLNYNQWAEKNRFQ 98
GS + RA+ L V LL+Q +A + +G G W T N W + F+
Sbjct: 6 GSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIW-------TFNAVGWPKGKHFR 58
Query: 99 IGDSIVFKYASGQDSVLQVNKDAYTNCSTEYPVARYTDGHTVFTFKQSGPYYFISGNKDN 158
GD +VF Y +V++V+ +Y NC T YT G T + G +FI ++
Sbjct: 59 AGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSK-GQNFFICNFPNH 117
Query: 159 CVNNEKLAVIVL 170
C ++ K+AV +
Sbjct: 118 CESDMKIAVTAV 129
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1
Length = 96
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 69 FLIGGKGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASGQDSVLQVNKDAYTNCSTE 128
+++GG G W T N W + RF+ GD ++F Y +V+ VN+ ++ C+T
Sbjct: 3 YVVGGSGGW-------TFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTP 55
Query: 129 YPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIVL 170
YT G + G YFI +C + K+AV L
Sbjct: 56 AGAKVYTSGRDQIKLPK-GQSYFICNFPGHCQSGMKIAVNAL 96
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%)
Query: 69 FLIGGKGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASGQDSVLQVNKDAYTNCSTE 128
+ +G W P +WA F IGD +VFKY +V +V + Y +C+
Sbjct: 3 YTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDT 62
Query: 129 YPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIV 169
P+A Y G K G Y+I G +C +K+ + V
Sbjct: 63 TPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103
>sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine max GN=ENOD55-1 PE=2 SV=1
Length = 137
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 106 KYASGQDSVLQVNKDAYTNCST---EYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNN 162
KY +SV +VN+ Y C+T E+ + + DG+T +SG +FISGN+ +C
Sbjct: 1 KYDERTESVHEVNETDYEQCNTVGKEHVL--FNDGNTKVMLTKSGFRHFISGNQSHCQMG 58
Query: 163 EKLAVIVLADRS 174
KL V+V+++ +
Sbjct: 59 LKLMVVVMSNNT 70
>sp|P00304|MPAA3_AMBEL Pollen allergen Amb a 3 OS=Ambrosia artemisiifolia var. elatior
PE=1 SV=2
Length = 101
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 66 AREFLIGGK--GNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASGQDSVLQV-NKDAY 122
+ +L+GG G W +D Y W+ + +F+ D + F + +G+DSV +V ++AY
Sbjct: 1 GKVYLVGGPELGGWKLQSDPRA--YALWSARQQFKTTDVLWFNFTTGEDSVAEVWREEAY 58
Query: 123 TNCSTEYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIV 169
C + P+ G FT G ++ C ++K V
Sbjct: 59 HACDIKDPIRLEPGGPDRFTLLTPGSHFI-------CTKDQKFVACV 98
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3
Length = 137
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 70 LIGGKGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASGQDSVLQVN-KDAYTNC--- 125
++G W P+ Y+QWA F++GDS+ F + + +V ++ K ++ C
Sbjct: 6 IVGDNTGWSVPSSPNF--YSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFV 63
Query: 126 STEYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIVLA 171
+++ V R + + + G +YF+ +C N +KL++ V+A
Sbjct: 64 NSDNDVERTSP--VIERLDELGMHYFVCTVGTHCSNGQKLSINVVA 107
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1
Length = 126
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 62 QKSEAREFLIGGKGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASGQDSVLQVNKDA 121
+ +E+ + +G G W T + W F+ GD +VFKY +V+ V
Sbjct: 26 EVAESVVYTVGDGGGW-------TFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGG 78
Query: 122 YTNCSTEYPVAR-YTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLAV 167
Y +C T P +R + G T + G YFI +C K+AV
Sbjct: 79 YKSC-TASPGSRVFKSGDDRITLSR-GTNYFICSVPGHCQGGLKIAV 123
>sp|Q2UBU2|HIR1_ASPOR Protein HIR1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=HIR1 PE=3 SV=1
Length = 1058
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 33/157 (21%)
Query: 73 GKGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYASGQDSVLQVNKDAYTNCSTEYPVA 132
GK + T D T L RF+ GD YA+ ++ N+ + T T A
Sbjct: 357 GKCLYATALDGTILAV-------RFEDGD---LGYATA----MEENEKSLTKFGTNRKGA 402
Query: 133 RYT---DGHTVFTFKQSGPYYFISGNKDNCVNNEKLAVIVLADRSNHLSNTTTGMSPSSP 189
T DG + ++G + G ++ ++ D++++++N + PS+
Sbjct: 403 GITETPDGLLLEEKSKAGEIKGVEG---------RMGALMGDDQADNITNEKPALLPSNA 453
Query: 190 PSPSTDVVPAPAPAGEYSPPEGTVEVNPTP-APEPNK 225
P+P+ +PAP + S P GT TP APEP K
Sbjct: 454 PTPARP--SSPAPDAQKSQPNGTA----TPSAPEPEK 484
>sp|Q12967|GNDS_HUMAN Ral guanine nucleotide dissociation stimulator OS=Homo sapiens
GN=RALGDS PE=1 SV=2
Length = 914
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 190 PSPSTDVVPAPAPAGEYSP-------PEGTVEVNPTPAPEPNKKPN 228
P P+ + APAPA E P P T+E+ P PAP P+ +P+
Sbjct: 319 PEPAVGLESAPAPALELEPAPEQDPAPSQTLELEPAPAPVPSLQPS 364
>sp|Q13905|RPGF1_HUMAN Rap guanine nucleotide exchange factor 1 OS=Homo sapiens GN=RAPGEF1
PE=1 SV=3
Length = 1077
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 166 AVIVLADRSNHLSNTTTGMSPSS---PPSPSTDVVPAPAPAGEYSPPEGTVEVNPTPAPE 222
A + L DR + N TTGMS S+ P + +V P P P V+ +P PA
Sbjct: 232 AELPLTDREVEILNKTTGMSQSTELLPDATDEEVAPPKPPL----PGIRVVDNSPPPALP 287
Query: 223 PNKKPNAASSTFVNVASTIG-AFAASSL 249
P K+ +A S T V V + + A + SSL
Sbjct: 288 PKKRQSAPSPTRVAVVAPMSRATSGSSL 315
>sp|Q28524|ADRB3_MACMU Beta-3 adrenergic receptor OS=Macaca mulatta GN=ADRB3 PE=2 SV=1
Length = 418
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 24/54 (44%)
Query: 167 VIVLADRSNHLSNTTTGMSPSSPPSPSTDVVPAPAPAGEYSPPEGTVEVNPTPA 220
V V+A R L G P SP+ APAPAG +PPEG PA
Sbjct: 227 VFVVATRQLRLLRWELGRFPPEESSPALSRSLAPAPAGTCAPPEGVPACCRRPA 280
>sp|A2ICN5|MEF2A_PIG Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2
SV=2
Length = 507
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 72/195 (36%), Gaps = 38/195 (19%)
Query: 52 LGILC---LVLLMQKSEAREFLIGGKGNWGTPTDNTTLNYNQWAEKNRFQIGDSIVFKYA 108
L +LC + L++ S + F T D L Y ++ E + +
Sbjct: 35 LSVLCDCEIALIIFNSSNKLFQYAS-----TDMDKVLLKYTEYNEPH----------ESG 79
Query: 109 SGQDSVLQVNKDAYTNCSTEYPVARYTDGHTVFTFKQSGPYYFISGNKDNCVNNEKLA-- 166
+ D V +NK + C + P Y V T Y I+ DN + N K+A
Sbjct: 80 TNSDIVEALNKKEHRGCDSPDPDTSY-----VLTPHTEEKYKKINEEFDNMMRNHKIAPG 134
Query: 167 ---------VIVLADRSNHLSNTTTGMSPSSPPSPSTDVVPAPAPAGEYSPPEGTVEVNP 217
V V N LS T G SS SPS A + SPP+ T+ N
Sbjct: 135 LPPQNFSMSVTVPVTSPNALSYTNPG---SSLVSPSLAASSTLADSSMLSPPQATLHRNV 191
Query: 218 TPAPEPNKKPNAASS 232
+P P + P+ S+
Sbjct: 192 SPG-APQRPPSTGSA 205
>sp|Q8FPA7|IF2_COREF Translation initiation factor IF-2 OS=Corynebacterium efficiens
(strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC
100395) GN=infB PE=3 SV=1
Length = 964
Score = 31.2 bits (69), Expect = 7.3, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 199 APAPAGEYSPPEGTVEVNPTPAPEPNKKPNAA 230
AP P +P GT PTPA KP AA
Sbjct: 89 APTPGAVAAPKPGTAAAKPTPAKPAAPKPTAA 120
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,724,869
Number of Sequences: 539616
Number of extensions: 4517608
Number of successful extensions: 30934
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 420
Number of HSP's that attempted gapping in prelim test: 25664
Number of HSP's gapped (non-prelim): 4157
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)