Query 025397
Match_columns 253
No_of_seqs 185 out of 221
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 05:23:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025397.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025397hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0027 Calmodulin and related 99.6 3.3E-15 7.2E-20 124.1 12.1 144 10-201 3-149 (151)
2 COG5126 FRQ1 Ca2+-binding prot 99.5 1.7E-13 3.6E-18 116.6 11.7 142 7-201 12-156 (160)
3 PTZ00183 centrin; Provisional 99.5 1.6E-12 3.4E-17 105.9 13.1 141 9-201 11-154 (158)
4 PTZ00184 calmodulin; Provision 99.4 2.3E-12 5.1E-17 103.3 13.7 137 12-200 8-147 (149)
5 KOG0031 Myosin regulatory ligh 99.2 1.8E-10 3.9E-15 97.4 12.1 139 6-200 23-164 (171)
6 KOG0034 Ca2+/calmodulin-depend 99.2 7.2E-11 1.6E-15 102.8 9.2 147 8-202 26-176 (187)
7 KOG0037 Ca2+-binding protein, 99.1 1.6E-09 3.4E-14 96.0 12.1 129 16-202 58-189 (221)
8 KOG0028 Ca2+-binding protein ( 99.0 1.6E-09 3.4E-14 92.2 10.5 134 16-201 34-170 (172)
9 PF13499 EF-hand_7: EF-hand do 99.0 4.2E-10 9.1E-15 80.3 4.1 65 128-199 2-66 (66)
10 cd05025 S-100A1 S-100A1: S-100 98.9 5.3E-09 1.2E-13 80.1 7.7 70 128-204 11-83 (92)
11 KOG0044 Ca2+ sensor (EF-Hand s 98.9 1.3E-08 2.9E-13 89.1 10.9 133 25-201 39-175 (193)
12 cd05026 S-100Z S-100Z: S-100Z 98.9 1E-08 2.2E-13 79.3 8.1 71 128-205 12-85 (93)
13 cd05022 S-100A13 S-100A13: S-1 98.8 1.7E-08 3.8E-13 78.0 8.7 72 127-209 9-83 (89)
14 cd05031 S-100A10_like S-100A10 98.7 3.8E-08 8.3E-13 75.7 6.6 70 127-203 9-81 (94)
15 cd05023 S-100A11 S-100A11: S-1 98.7 6.6E-08 1.4E-12 74.6 7.7 71 128-204 11-83 (89)
16 cd00052 EH Eps15 homology doma 98.7 1.1E-07 2.3E-12 67.2 8.0 64 129-205 2-65 (67)
17 cd05027 S-100B S-100B: S-100B 98.7 1.1E-07 2.4E-12 73.1 8.3 72 127-205 9-83 (88)
18 KOG0036 Predicted mitochondria 98.6 2.9E-07 6.3E-12 88.2 10.6 144 19-219 18-168 (463)
19 KOG0027 Calmodulin and related 98.6 4.1E-07 8.8E-12 75.5 9.7 108 56-203 8-115 (151)
20 cd05029 S-100A6 S-100A6: S-100 98.6 2.1E-07 4.6E-12 71.6 7.0 70 128-205 12-83 (88)
21 smart00027 EH Eps15 homology d 98.5 5.6E-07 1.2E-11 69.4 8.0 67 126-205 10-76 (96)
22 PTZ00183 centrin; Provisional 98.5 1.8E-06 3.9E-11 70.1 11.2 103 56-202 17-119 (158)
23 cd00252 SPARC_EC SPARC_EC; ext 98.5 2.2E-06 4.8E-11 69.4 11.0 62 124-200 46-107 (116)
24 cd00213 S-100 S-100: S-100 dom 98.4 8.7E-07 1.9E-11 66.9 7.6 69 127-202 9-80 (88)
25 KOG0044 Ca2+ sensor (EF-Hand s 98.4 1.7E-06 3.7E-11 75.9 8.9 110 12-154 63-175 (193)
26 cd00051 EFh EF-hand, calcium b 98.4 1.5E-06 3.4E-11 58.2 6.6 61 128-199 2-62 (63)
27 PF13833 EF-hand_8: EF-hand do 98.4 1.1E-06 2.3E-11 60.5 5.8 53 139-201 1-53 (54)
28 KOG4223 Reticulocalbin, calume 98.2 7.2E-06 1.6E-10 76.6 9.2 144 17-201 79-228 (325)
29 KOG0377 Protein serine/threoni 98.2 4.2E-06 9.2E-11 81.2 7.5 149 19-204 468-618 (631)
30 PTZ00184 calmodulin; Provision 98.2 3.6E-05 7.9E-10 61.4 11.4 102 57-202 12-113 (149)
31 PF13499 EF-hand_7: EF-hand do 98.1 3.7E-06 8E-11 59.7 4.9 65 58-152 2-66 (66)
32 cd05030 calgranulins Calgranul 98.1 1.3E-05 2.9E-10 61.3 7.6 71 128-204 10-82 (88)
33 KOG4223 Reticulocalbin, calume 98.1 9.9E-06 2.1E-10 75.6 7.8 149 19-231 167-320 (325)
34 KOG0030 Myosin essential light 98.1 5.1E-05 1.1E-09 63.6 10.7 137 13-199 9-149 (152)
35 cd05024 S-100A10 S-100A10: A s 97.9 4E-05 8.6E-10 59.8 7.1 71 128-205 10-80 (91)
36 COG5126 FRQ1 Ca2+-binding prot 97.8 8.6E-05 1.9E-09 63.5 7.9 68 124-203 18-85 (160)
37 PF00036 EF-hand_1: EF hand; 97.7 3.2E-05 7E-10 47.9 3.0 28 128-155 2-29 (29)
38 smart00027 EH Eps15 homology d 97.7 0.00013 2.8E-09 56.2 7.0 75 11-105 6-83 (96)
39 PF00036 EF-hand_1: EF hand; 97.7 3.5E-05 7.7E-10 47.7 2.7 27 175-201 2-28 (29)
40 KOG0041 Predicted Ca2+-binding 97.7 0.00021 4.5E-09 63.4 8.3 107 86-203 55-165 (244)
41 PLN02964 phosphatidylserine de 97.7 0.00012 2.6E-09 74.5 7.7 99 10-154 138-243 (644)
42 KOG0038 Ca2+-binding kinase in 97.6 0.00041 8.9E-09 58.9 8.3 105 57-200 72-176 (189)
43 KOG2643 Ca2+ binding protein, 97.6 0.00018 4E-09 69.7 6.9 32 172-203 424-455 (489)
44 PLN02964 phosphatidylserine de 97.5 0.00055 1.2E-08 69.8 10.4 137 29-216 119-257 (644)
45 cd00052 EH Eps15 homology doma 97.5 0.00036 7.8E-09 48.9 6.4 60 19-94 3-65 (67)
46 cd05029 S-100A6 S-100A6: S-100 97.5 0.00042 9E-09 53.3 6.9 72 13-94 8-83 (88)
47 PF14658 EF-hand_9: EF-hand do 97.5 0.00026 5.6E-09 52.2 5.2 62 130-201 2-64 (66)
48 cd05026 S-100Z S-100Z: S-100Z 97.5 0.00038 8.3E-09 53.7 6.4 69 14-92 9-83 (93)
49 KOG0037 Ca2+-binding protein, 97.5 0.00053 1.1E-08 61.2 8.1 66 127-202 58-123 (221)
50 PF13405 EF-hand_6: EF-hand do 97.4 0.00013 2.8E-09 45.1 2.8 29 128-156 2-31 (31)
51 PF10591 SPARC_Ca_bdg: Secrete 97.4 9.1E-05 2E-09 59.6 2.5 105 80-197 8-112 (113)
52 PRK12309 transaldolase/EF-hand 97.3 0.0013 2.9E-08 63.4 10.0 62 118-203 326-387 (391)
53 PF13202 EF-hand_5: EF hand; P 97.3 0.00022 4.8E-09 42.6 2.9 25 128-152 1-25 (25)
54 cd00252 SPARC_EC SPARC_EC; ext 97.3 0.00047 1E-08 55.9 5.1 55 17-88 50-106 (116)
55 cd05025 S-100A1 S-100A1: S-100 97.3 0.00093 2E-08 51.0 6.4 69 15-93 9-83 (92)
56 cd05027 S-100B S-100B: S-100B 97.3 0.001 2.2E-08 51.1 6.6 73 13-93 6-82 (88)
57 PF12763 EF-hand_4: Cytoskelet 97.3 0.0012 2.7E-08 52.4 7.3 73 128-214 12-84 (104)
58 cd05022 S-100A13 S-100A13: S-1 97.2 0.0011 2.4E-08 51.2 6.6 69 14-96 7-81 (89)
59 KOG0028 Ca2+-binding protein ( 97.2 0.0012 2.5E-08 56.7 7.2 67 127-204 34-100 (172)
60 KOG0036 Predicted mitochondria 97.2 0.0018 3.8E-08 62.7 9.0 76 125-210 13-88 (463)
61 KOG0034 Ca2+/calmodulin-depend 97.2 0.0025 5.5E-08 55.7 9.2 97 25-155 78-176 (187)
62 PF13833 EF-hand_8: EF-hand do 97.1 0.0014 3.1E-08 44.8 5.6 49 29-90 3-53 (54)
63 cd05031 S-100A10_like S-100A10 97.1 0.0018 3.8E-08 49.7 6.5 70 15-94 8-83 (94)
64 KOG2643 Ca2+ binding protein, 97.1 0.0024 5.2E-08 62.2 8.6 53 25-92 211-263 (489)
65 KOG4065 Uncharacterized conser 97.0 0.00071 1.5E-08 55.4 3.9 69 129-198 70-142 (144)
66 cd05023 S-100A11 S-100A11: S-1 97.0 0.0025 5.4E-08 49.1 6.7 71 13-91 7-81 (89)
67 cd05030 calgranulins Calgranul 97.0 0.0017 3.6E-08 49.6 5.6 71 13-92 6-81 (88)
68 PF13202 EF-hand_5: EF hand; P 97.0 0.00074 1.6E-08 40.3 2.7 24 176-199 2-25 (25)
69 cd00051 EFh EF-hand, calcium b 96.9 0.002 4.3E-08 42.7 4.8 56 19-88 4-62 (63)
70 KOG0031 Myosin regulatory ligh 96.8 0.0021 4.5E-08 54.9 5.3 72 127-201 33-129 (171)
71 cd00213 S-100 S-100: S-100 dom 96.7 0.0048 1E-07 46.3 5.7 69 13-91 6-80 (88)
72 KOG2562 Protein phosphatase 2 96.5 0.011 2.3E-07 58.1 8.2 146 19-211 282-432 (493)
73 PF12763 EF-hand_4: Cytoskelet 96.4 0.011 2.3E-07 47.1 6.5 76 12-103 7-84 (104)
74 PF13405 EF-hand_6: EF-hand do 96.4 0.0033 7.3E-08 38.7 2.8 27 175-201 2-28 (31)
75 PF14788 EF-hand_10: EF hand; 96.4 0.0086 1.9E-07 42.0 5.1 50 142-202 1-50 (51)
76 cd05024 S-100A10 S-100A10: A s 96.2 0.018 3.9E-07 45.0 6.5 73 14-94 7-80 (91)
77 KOG4251 Calcium binding protei 95.7 0.01 2.2E-07 54.5 3.7 149 17-198 103-261 (362)
78 KOG0046 Ca2+-binding actin-bun 95.7 0.026 5.6E-07 56.3 6.8 70 127-205 20-89 (627)
79 smart00054 EFh EF-hand, calciu 95.2 0.024 5.2E-07 31.7 2.9 27 175-201 2-28 (29)
80 KOG0040 Ca2+-binding actin-bun 95.0 0.12 2.5E-06 57.2 9.2 107 11-151 2249-2358(2399)
81 PRK12309 transaldolase/EF-hand 94.9 0.064 1.4E-06 51.9 6.5 53 55-154 333-385 (391)
82 PF10591 SPARC_Ca_bdg: Secrete 94.9 0.0082 1.8E-07 48.3 0.3 52 19-85 58-111 (113)
83 smart00054 EFh EF-hand, calciu 94.6 0.053 1.2E-06 30.2 3.2 27 128-154 2-28 (29)
84 KOG1029 Endocytic adaptor prot 94.1 0.66 1.4E-05 48.6 11.8 155 19-202 20-258 (1118)
85 KOG0041 Predicted Ca2+-binding 93.9 0.087 1.9E-06 47.1 4.6 72 13-101 97-171 (244)
86 KOG0751 Mitochondrial aspartat 93.7 0.9 2E-05 45.6 11.6 114 23-159 83-212 (694)
87 KOG0377 Protein serine/threoni 93.6 0.13 2.7E-06 50.8 5.5 64 19-91 551-616 (631)
88 KOG0040 Ca2+-binding actin-bun 93.3 0.19 4.2E-06 55.6 6.7 70 128-201 2255-2324(2399)
89 PF14658 EF-hand_9: EF-hand do 93.0 0.39 8.5E-06 35.4 6.0 59 20-90 3-64 (66)
90 KOG2562 Protein phosphatase 2 92.9 0.46 9.9E-06 47.0 8.2 111 19-150 178-302 (493)
91 KOG0030 Myosin essential light 92.6 0.32 7E-06 41.1 5.8 66 126-202 11-78 (152)
92 KOG0046 Ca2+-binding actin-bun 91.5 0.38 8.2E-06 48.3 5.7 72 11-94 15-89 (627)
93 KOG0751 Mitochondrial aspartat 89.2 11 0.00024 38.2 13.5 69 127-204 109-178 (694)
94 PF09279 EF-hand_like: Phospho 88.6 1 2.2E-05 33.3 4.9 63 128-200 2-68 (83)
95 KOG4251 Calcium binding protei 88.5 0.59 1.3E-05 43.2 4.1 69 123-200 98-167 (362)
96 KOG4666 Predicted phosphate ac 87.7 1.3 2.8E-05 42.4 5.9 102 55-201 258-359 (412)
97 KOG1707 Predicted Ras related/ 87.6 3.1 6.7E-05 42.5 8.8 142 13-201 193-343 (625)
98 PF14788 EF-hand_10: EF hand; 87.1 2.1 4.5E-05 30.1 5.2 48 30-90 1-49 (51)
99 KOG3555 Ca2+-binding proteogly 84.0 1.2 2.5E-05 42.9 3.7 59 127-200 251-309 (434)
100 PRK09430 djlA Dna-J like membr 83.8 8.8 0.00019 35.2 9.3 99 25-163 67-165 (267)
101 KOG0042 Glycerol-3-phosphate d 80.4 5.2 0.00011 40.9 6.9 65 128-203 595-659 (680)
102 cd07313 terB_like_2 tellurium 79.6 4.4 9.5E-05 31.0 4.9 90 26-156 12-101 (104)
103 cd07316 terB_like_DjlA N-termi 79.0 7.4 0.00016 29.6 6.1 92 26-157 12-103 (106)
104 KOG4065 Uncharacterized conser 78.7 5.7 0.00012 32.8 5.5 61 19-86 71-141 (144)
105 KOG0038 Ca2+-binding kinase in 74.6 12 0.00026 32.2 6.5 94 25-154 83-177 (189)
106 KOG4578 Uncharacterized conser 72.6 1.5 3.3E-05 41.9 0.8 101 78-199 296-396 (421)
107 PF05099 TerB: Tellurite resis 71.9 1.5 3.2E-05 35.2 0.5 99 26-165 36-134 (140)
108 KOG1029 Endocytic adaptor prot 69.9 12 0.00025 39.8 6.4 64 130-206 17-82 (1118)
109 KOG1955 Ral-GTPase effector RA 67.0 10 0.00022 38.3 5.1 62 126-200 231-292 (737)
110 KOG0169 Phosphoinositide-speci 66.3 12 0.00025 39.3 5.6 68 124-202 134-201 (746)
111 KOG0998 Synaptic vesicle prote 63.3 9.2 0.0002 40.8 4.3 167 13-209 127-353 (847)
112 KOG3555 Ca2+-binding proteogly 61.1 7.8 0.00017 37.5 3.0 49 19-84 254-304 (434)
113 KOG3866 DNA-binding protein of 61.0 7.3 0.00016 37.2 2.8 66 131-199 249-322 (442)
114 KOG4578 Uncharacterized conser 57.4 8.1 0.00018 37.1 2.4 65 57-154 334-398 (421)
115 PF08726 EFhand_Ca_insen: Ca2+ 57.2 10 0.00022 28.1 2.5 26 128-154 8-33 (69)
116 KOG0998 Synaptic vesicle prote 57.1 18 0.0004 38.5 5.3 158 17-207 13-196 (847)
117 cd07313 terB_like_2 tellurium 57.1 16 0.00035 27.7 3.8 54 140-202 13-66 (104)
118 PF05042 Caleosin: Caleosin re 56.3 55 0.0012 28.5 7.2 75 127-201 8-124 (174)
119 KOG4666 Predicted phosphate ac 53.3 23 0.0005 34.2 4.7 99 127-240 260-364 (412)
120 COG5502 Uncharacterized conser 48.9 1.4E+02 0.0029 25.1 8.1 99 80-200 24-122 (135)
121 COG0634 Hpt Hypoxanthine-guani 47.6 36 0.00077 29.8 4.7 38 77-114 10-48 (178)
122 PF14425 Imm3: Immunity protei 47.4 56 0.0012 26.7 5.5 92 116-215 19-111 (117)
123 PRK10598 lipoprotein; Provisio 45.6 33 0.00072 30.2 4.2 44 190-233 123-170 (186)
124 KOG0035 Ca2+-binding actin-bun 45.5 30 0.00065 37.2 4.6 82 127-214 748-839 (890)
125 PF09068 EF-hand_2: EF hand; 44.9 1.2E+02 0.0025 24.9 7.1 86 54-154 39-125 (127)
126 PF14513 DAG_kinase_N: Diacylg 43.3 22 0.00048 29.7 2.7 57 29-93 6-63 (138)
127 KOG2243 Ca2+ release channel ( 43.2 32 0.0007 39.2 4.4 89 130-234 4061-4151(5019)
128 PF12174 RST: RCD1-SRO-TAF4 (R 41.8 29 0.00064 25.7 2.9 28 174-204 29-56 (70)
129 cd08030 LA_like_plant La-motif 41.1 55 0.0012 25.5 4.4 48 180-231 26-90 (90)
130 PF11061 DUF2862: Protein of u 39.5 24 0.00052 25.9 2.0 33 201-233 15-47 (64)
131 PRK15337 type III secretion sy 39.5 2.1E+02 0.0045 30.2 9.5 58 172-236 595-658 (686)
132 PF09987 DUF2226: Uncharacteri 39.4 1.6E+02 0.0034 27.8 7.9 89 124-226 160-252 (297)
133 cd07311 terB_like_1 tellurium 38.8 2.1E+02 0.0046 24.0 8.0 34 25-64 35-68 (150)
134 PF09851 SHOCT: Short C-termin 38.5 35 0.00076 21.1 2.4 18 186-203 13-30 (31)
135 COG4604 CeuD ABC-type enteroch 38.0 1.1E+02 0.0023 28.0 6.3 25 199-223 174-198 (252)
136 cd07176 terB tellurite resista 37.5 47 0.001 25.0 3.6 34 124-160 77-110 (111)
137 PF09069 EF-hand_3: EF-hand; 37.2 59 0.0013 25.3 4.0 39 174-214 4-42 (90)
138 PF05517 p25-alpha: p25-alpha 36.1 1.8E+02 0.0038 24.4 7.1 67 130-204 3-72 (154)
139 cd07176 terB tellurite resista 35.5 46 0.001 25.1 3.2 57 140-203 16-72 (111)
140 PRK07090 class II aldolase/add 35.0 2.1E+02 0.0045 26.1 7.9 86 92-187 166-256 (260)
141 PRK10236 hypothetical protein; 33.2 3.8E+02 0.0083 24.5 9.4 90 55-151 19-116 (237)
142 KOG0042 Glycerol-3-phosphate d 32.2 52 0.0011 33.9 3.7 64 13-90 591-657 (680)
143 PRK03887 methylated-DNA--prote 31.7 3.1E+02 0.0066 24.0 8.0 107 78-216 30-137 (175)
144 TIGR02624 rhamnu_1P_ald rhamnu 30.1 2.3E+02 0.005 26.1 7.4 71 90-164 190-266 (270)
145 cd08029 LA_like_fungal La-moti 30.0 60 0.0013 24.3 3.0 47 180-231 25-76 (76)
146 cd08032 LARP_7 La RNA-binding 28.0 73 0.0016 24.3 3.1 48 180-231 30-82 (82)
147 KOG4286 Dystrophin-like protei 28.0 7.3E+02 0.016 26.9 11.1 127 53-212 417-543 (966)
148 COG4103 Uncharacterized protei 27.3 90 0.0019 26.6 3.8 44 118-165 24-67 (148)
149 PF12174 RST: RCD1-SRO-TAF4 (R 27.0 71 0.0015 23.6 2.8 19 75-93 38-56 (70)
150 KOG0169 Phosphoinositide-speci 26.2 6.5E+02 0.014 26.9 10.5 68 55-156 135-202 (746)
151 KOG4004 Matricellular protein 25.8 78 0.0017 28.6 3.3 56 131-199 192-248 (259)
152 cd03211 GST_C_Metaxin2 GST_C f 25.5 1.8E+02 0.0039 23.1 5.2 41 176-216 39-79 (126)
153 PLN02952 phosphoinositide phos 25.5 1.2E+02 0.0027 31.2 5.2 54 139-202 13-66 (599)
154 PF10962 DUF2764: Protein of u 24.5 5.8E+02 0.012 23.7 10.3 142 25-200 68-217 (271)
155 cd03211 GST_C_Metaxin2 GST_C f 24.2 1.4E+02 0.0031 23.7 4.4 42 57-104 37-78 (126)
156 PRK15423 hypoxanthine phosphor 24.1 1.6E+02 0.0034 25.3 4.9 37 78-114 8-47 (178)
157 PF09279 EF-hand_like: Phospho 24.1 96 0.0021 22.5 3.1 26 175-201 2-27 (83)
158 PRK11409 antitoxin YefM; Provi 24.0 2E+02 0.0044 21.6 4.9 74 78-160 3-76 (83)
159 PF14129 DUF4296: Domain of un 23.9 2E+02 0.0043 21.6 4.9 51 29-91 3-60 (87)
160 PF12767 SAGA-Tad1: Transcript 23.7 1.3E+02 0.0029 27.0 4.6 49 140-203 6-55 (252)
161 PF14513 DAG_kinase_N: Diacylg 23.0 58 0.0013 27.2 1.9 31 174-204 26-63 (138)
162 PF01023 S_100: S-100/ICaBP ty 22.8 94 0.002 20.7 2.6 29 175-203 8-38 (44)
163 COG1658 Small primase-like pro 22.6 1.3E+02 0.0028 24.9 3.9 49 190-246 40-94 (127)
164 PRK09430 djlA Dna-J like membr 22.5 2.3E+02 0.005 25.9 5.9 63 127-200 57-119 (267)
165 KOG1707 Predicted Ras related/ 22.3 82 0.0018 32.6 3.1 38 119-156 308-345 (625)
166 cd08033 LARP_6 La RNA-binding 21.6 1.9E+02 0.004 21.8 4.2 48 180-231 25-77 (77)
167 KOG1954 Endocytosis/signaling 21.3 1.5E+02 0.0033 29.5 4.6 56 127-196 445-500 (532)
168 PF05099 TerB: Tellurite resis 21.3 22 0.00047 28.3 -0.9 52 140-200 37-88 (140)
169 PRK06464 phosphoenolpyruvate s 21.1 4E+02 0.0086 28.4 8.0 76 80-155 548-658 (795)
170 PF07273 DUF1439: Protein of u 21.0 1.4E+02 0.0031 24.8 3.9 31 192-222 103-133 (152)
171 PF01341 Glyco_hydro_6: Glycos 20.9 1.5E+02 0.0032 27.9 4.4 76 77-157 84-189 (298)
172 PF10078 DUF2316: Uncharacteri 20.9 2.2E+02 0.0048 22.1 4.6 71 29-112 8-81 (89)
173 TIGR01399 hrcV type III secret 20.3 6.7E+02 0.015 26.5 9.3 57 172-235 586-648 (677)
174 PF09105 SelB-wing_1: Elongati 20.2 1.8E+02 0.0038 20.5 3.5 39 53-98 2-44 (61)
175 cd08030 LA_like_plant La-motif 20.1 1.6E+02 0.0036 22.8 3.8 24 92-115 66-89 (90)
No 1
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.63 E-value=3.3e-15 Score=124.08 Aligned_cols=144 Identities=13% Similarity=0.210 Sum_probs=118.6
Q ss_pred ehhhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHH
Q 025397 10 DGTQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASK 86 (253)
Q Consensus 10 DG~~l~~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~ 86 (253)
...++.++.+.|. .| +++ |++|..||.. +..+|. . .+...+..+++++|.+ ++|.|+.++|..
T Consensus 3 ~~~~~~el~~~F~~fD~d~~-G~i~~~el~~~lr~lg~-----~--~t~~el~~~~~~~D~d------g~g~I~~~eF~~ 68 (151)
T KOG0027|consen 3 SEEQILELKEAFQLFDKDGD-GKISVEELGAVLRSLGQ-----N--PTEEELRDLIKEIDLD------GDGTIDFEEFLD 68 (151)
T ss_pred CHHHHHHHHHHHHHHCCCCC-CcccHHHHHHHHHHcCC-----C--CCHHHHHHHHHHhCCC------CCCeEcHHHHHH
Confidence 4567888999999 99 999 9999999999 776666 2 3478899999999999 999999999999
Q ss_pred HHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCC
Q 025397 87 LASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSE 166 (253)
Q Consensus 87 ~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~ 166 (253)
.+......-...- .-...+..+|+.+|.|++|+||.+||+.+|.++|-.+ +
T Consensus 69 l~~~~~~~~~~~~-----------------------~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~-----~- 119 (151)
T KOG0027|consen 69 LMEKLGEEKTDEE-----------------------ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKL-----T- 119 (151)
T ss_pred HHHhhhccccccc-----------------------ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcC-----C-
Confidence 7665544332221 1233599999999999999999999999999977432 1
Q ss_pred CCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 167 CRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 167 ~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
....+.+++++|.|+||.|+++||.++|..
T Consensus 120 -----~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 120 -----DEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred -----HHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 346889999999999999999999999863
No 2
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.51 E-value=1.7e-13 Score=116.55 Aligned_cols=142 Identities=18% Similarity=0.309 Sum_probs=114.9
Q ss_pred EEeehhhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHH
Q 025397 7 TVIDGTQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDH 83 (253)
Q Consensus 7 ~vlDG~~l~~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~e 83 (253)
+.++-++|+.+.+.|. +| ++| |.|++.+|.. +..+ |.+.|.+.+..+++.++.+ ++.|+-.+
T Consensus 12 ~~~t~~qi~~lkeaF~l~D~d~~-G~I~~~el~~ilr~l-------g~~~s~~ei~~l~~~~d~~-------~~~idf~~ 76 (160)
T COG5126 12 TQLTEEQIQELKEAFQLFDRDSD-GLIDRNELGKILRSL-------GFNPSEAEINKLFEEIDAG-------NETVDFPE 76 (160)
T ss_pred ccCCHHHHHHHHHHHHHhCcCCC-CCCcHHHHHHHHHHc-------CCCCcHHHHHHHHHhccCC-------CCccCHHH
Confidence 3567788999999999 99 999 9999999999 5533 4457899999999997764 78899777
Q ss_pred HHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCC
Q 025397 84 ASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPP 163 (253)
Q Consensus 84 F~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp 163 (253)
|...|... +++ --..|+ +..+|+.+|.|++|+||..||+..|..+|-.+ |
T Consensus 77 Fl~~ms~~-------~~~---------------~~~~Ee-----l~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~--~- 126 (160)
T COG5126 77 FLTVMSVK-------LKR---------------GDKEEE-----LREAFKLFDKDHDGYISIGELRRVLKSLGERL--S- 126 (160)
T ss_pred HHHHHHHH-------hcc---------------CCcHHH-----HHHHHHHhCCCCCceecHHHHHHHHHhhcccC--C-
Confidence 77744433 322 112333 99999999999999999999999999877542 2
Q ss_pred CCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 164 FSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 164 ~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
+.-++.+|+++|.|+||.|++++|++.+..
T Consensus 127 --------deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 127 --------DEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred --------HHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 456899999999999999999999998753
No 3
>PTZ00183 centrin; Provisional
Probab=99.45 E-value=1.6e-12 Score=105.91 Aligned_cols=141 Identities=10% Similarity=0.217 Sum_probs=112.3
Q ss_pred eehhhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHH
Q 025397 9 IDGTQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHAS 85 (253)
Q Consensus 9 lDG~~l~~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~ 85 (253)
+....+..+...|. +| +++ |.||..|+.. +..+|. .++...+..+++.++.+ ++|.|+.++|.
T Consensus 11 ~~~~~~~~~~~~F~~~D~~~~-G~i~~~e~~~~l~~~g~-------~~~~~~~~~l~~~~d~~------~~g~i~~~eF~ 76 (158)
T PTZ00183 11 LTEDQKKEIREAFDLFDTDGS-GTIDPKELKVAMRSLGF-------EPKKEEIKQMIADVDKD------GSGKIDFEEFL 76 (158)
T ss_pred CCHHHHHHHHHHHHHhCCCCC-CcccHHHHHHHHHHhCC-------CCCHHHHHHHHHHhCCC------CCCcEeHHHHH
Confidence 34567888889999 99 999 9999999999 664443 35677899999999999 89999999998
Q ss_pred HHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCC
Q 025397 86 KLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFS 165 (253)
Q Consensus 86 ~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~ 165 (253)
..+.... ... .....+..+|+.+|.+++|.|+..|++.++..++.. ..
T Consensus 77 ~~~~~~~-------~~~--------------------~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~-----l~ 124 (158)
T PTZ00183 77 DIMTKKL-------GER--------------------DPREEILKAFRLFDDDKTGKISLKNLKRVAKELGET-----IT 124 (158)
T ss_pred HHHHHHh-------cCC--------------------CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC-----CC
Confidence 7543221 110 122348899999999999999999999999875532 12
Q ss_pred CCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 166 ECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 166 ~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
...+..+|..+|.|++|.|++++|+..|+.
T Consensus 125 ------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 125 ------DEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred ------HHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 346889999999999999999999988865
No 4
>PTZ00184 calmodulin; Provisional
Probab=99.45 E-value=2.3e-12 Score=103.32 Aligned_cols=137 Identities=12% Similarity=0.266 Sum_probs=108.2
Q ss_pred hhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHH
Q 025397 12 TQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (253)
Q Consensus 12 ~~l~~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l 88 (253)
+.+..+...|. +| +++ |.||..|+.. +..++. ..++..+..+++.++.+ ++|.|+.++|...+
T Consensus 8 ~~~~~~~~~F~~~D~~~~-G~i~~~e~~~~l~~~~~-------~~~~~~~~~~~~~~d~~------~~g~i~~~ef~~~l 73 (149)
T PTZ00184 8 EQIAEFKEAFSLFDKDGD-GTITTKELGTVMRSLGQ-------NPTEAELQDMINEVDAD------GNGTIDFPEFLTLM 73 (149)
T ss_pred HHHHHHHHHHHHHcCCCC-CcCCHHHHHHHHHHhCC-------CCCHHHHHHHHHhcCcC------CCCcCcHHHHHHHH
Confidence 46677778999 99 899 9999999999 554443 24567889999999999 89999999998855
Q ss_pred HHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCC
Q 025397 89 SDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECR 168 (253)
Q Consensus 89 ~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~ 168 (253)
...+ .. ......+..+|+.+|.+++|.|++++++.++..++. +. +
T Consensus 74 ~~~~-------~~--------------------~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~----~~-~--- 118 (149)
T PTZ00184 74 ARKM-------KD--------------------TDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE----KL-T--- 118 (149)
T ss_pred HHhc-------cC--------------------CcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC----CC-C---
Confidence 4321 11 012234789999999999999999999999987542 21 2
Q ss_pred CCchHHHHHHHHHhccCCCcccCHHHHHHHHH
Q 025397 169 STEFPQLNDILKKHGAEGEEELGQAQFTELLR 200 (253)
Q Consensus 169 ~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk 200 (253)
...+..+|..+|.+++|.|+++||...|.
T Consensus 119 ---~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 119 ---DEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred ---HHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 34688999999999999999999998764
No 5
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.21 E-value=1.8e-10 Score=97.36 Aligned_cols=139 Identities=15% Similarity=0.266 Sum_probs=117.4
Q ss_pred eEEeehhhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHH
Q 025397 6 FTVIDGTQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRD 82 (253)
Q Consensus 6 ~~vlDG~~l~~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~ 82 (253)
..++|-++|.+|.+.|. +| |.| |.|-+..|++ ++.+|- . .|+..++..|++ ..|+|.-.
T Consensus 23 Famf~q~QIqEfKEAF~~mDqnrD-G~IdkeDL~d~~aSlGk-----~--~~d~elDaM~~E----------a~gPINft 84 (171)
T KOG0031|consen 23 FAMFDQSQIQEFKEAFNLMDQNRD-GFIDKEDLRDMLASLGK-----I--ASDEELDAMMKE----------APGPINFT 84 (171)
T ss_pred HHHhhHHHHHHHHHHHHHHhccCC-CcccHHHHHHHHHHcCC-----C--CCHHHHHHHHHh----------CCCCeeHH
Confidence 45789999999999999 99 999 9999999999 998887 3 578899999998 67889966
Q ss_pred HHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCC
Q 025397 83 HASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVP 162 (253)
Q Consensus 83 eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlP 162 (253)
.|+. .+...|+. .|+ +..+.++|+.||.+++|+|..+.||..|...|.-+
T Consensus 85 ~FLT-------mfGekL~g-----------------tdp---e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~--- 134 (171)
T KOG0031|consen 85 VFLT-------MFGEKLNG-----------------TDP---EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRF--- 134 (171)
T ss_pred HHHH-------HHHHHhcC-----------------CCH---HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccC---
Confidence 6655 44555655 223 56799999999999999999999999999977543
Q ss_pred CCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHH
Q 025397 163 PFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLR 200 (253)
Q Consensus 163 p~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk 200 (253)
+ +.-+++++..+-.|..|.++|.+|+..++
T Consensus 135 --~------~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 135 --T------DEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred --C------HHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 2 44689999999999999999999999887
No 6
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.20 E-value=7.2e-11 Score=102.84 Aligned_cols=147 Identities=14% Similarity=0.204 Sum_probs=110.4
Q ss_pred EeehhhHhhhhcccc-CC-C-CCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccc-cCHHH
Q 025397 8 VIDGTQLRSLSQPLA-LP-T-SDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKE-FDRDH 83 (253)
Q Consensus 8 vlDG~~l~~l~~~F~-LD-d-~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~-i~~~e 83 (253)
.++-++|..|..+|. |+ + ++ |.+|+.|+..+-.+.. ..+.+.|++.|+.+ +++. |+.++
T Consensus 26 ~fs~~EI~~L~~rF~kl~~~~~~-g~lt~eef~~i~~~~~----------Np~~~rI~~~f~~~------~~~~~v~F~~ 88 (187)
T KOG0034|consen 26 QFSANEIERLYERFKKLDRNNGD-GYLTKEEFLSIPELAL----------NPLADRIIDRFDTD------GNGDPVDFEE 88 (187)
T ss_pred ccCHHHHHHHHHHHHHhcccccc-CccCHHHHHHHHHHhc----------CcHHHHHHHHHhcc------CCCCccCHHH
Confidence 456678899999999 99 6 77 9999999999543222 45677888899888 6676 99999
Q ss_pred HHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCC
Q 025397 84 ASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPP 163 (253)
Q Consensus 84 F~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp 163 (253)
|...+.-+..-.- ..++ +.=+|+-+|.+++|+|+++|+..++..+-.....-
T Consensus 89 Fv~~ls~f~~~~~----------------------~~~K-----l~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~- 140 (187)
T KOG0034|consen 89 FVRLLSVFSPKAS----------------------KREK-----LRFAFRVYDLDGDGFISREELKQILRMMVGENDDM- 140 (187)
T ss_pred HHHHHhhhcCCcc----------------------HHHH-----HHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcc-
Confidence 9886654432110 1134 77899999999999999999999999865321111
Q ss_pred CCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHH
Q 025397 164 FSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 202 (253)
Q Consensus 164 ~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~i 202 (253)
+.+. ...+.+.+|.++|.|+||.||++||++.+.+.
T Consensus 141 --~~e~-~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 141 --SDEQ-LEDIVDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred --hHHH-HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 1122 23456889999999999999999999988653
No 7
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.08 E-value=1.6e-09 Score=95.97 Aligned_cols=129 Identities=12% Similarity=0.163 Sum_probs=106.9
Q ss_pred hhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHH
Q 025397 16 SLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYI 92 (253)
Q Consensus 16 ~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l 92 (253)
.+...|. .| ++. |.|+-+||++ |...+- + +....=+..++.-||.+ ..|.|+..||.++-+
T Consensus 58 ~~~~~f~~vD~d~s-g~i~~~eLq~aLsn~~~--~----~Fs~~TcrlmI~mfd~~------~~G~i~f~EF~~Lw~--- 121 (221)
T KOG0037|consen 58 QLAGWFQSVDRDRS-GRILAKELQQALSNGTW--S----PFSIETCRLMISMFDRD------NSGTIGFKEFKALWK--- 121 (221)
T ss_pred HHHHHHHhhCcccc-ccccHHHHHHHhhcCCC--C----CCCHHHHHHHHHHhcCC------CCCccCHHHHHHHHH---
Confidence 4458899 99 888 9999999999 665555 1 23367788899999999 899999999998544
Q ss_pred HHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCch
Q 025397 93 TAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEF 172 (253)
Q Consensus 93 ~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~ 172 (253)
.|++ +.++|+.+|.|++|+|++.||+.||..+|=. +| .
T Consensus 122 -----~i~~--------------------------Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~--Ls---------p 159 (221)
T KOG0037|consen 122 -----YINQ--------------------------WRNVFRTYDRDRSGTIDSSELRQALTQLGYR--LS---------P 159 (221)
T ss_pred -----HHHH--------------------------HHHHHHhcccCCCCcccHHHHHHHHHHcCcC--CC---------H
Confidence 3444 9999999999999999999999999998843 33 4
Q ss_pred HHHHHHHHHhccCCCcccCHHHHHHHHHHH
Q 025397 173 PQLNDILKKHGAEGEEELGQAQFTELLRQV 202 (253)
Q Consensus 173 ~~~~~if~e~D~d~dg~Vd~eEF~~lmk~i 202 (253)
.+++-|++++|.-++|.+..+.|.+..-.+
T Consensus 160 q~~~~lv~kyd~~~~g~i~FD~FI~ccv~L 189 (221)
T KOG0037|consen 160 QFYNLLVRKYDRFGGGRIDFDDFIQCCVVL 189 (221)
T ss_pred HHHHHHHHHhccccCCceeHHHHHHHHHHH
Confidence 578999999998889999999998876544
No 8
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.05 E-value=1.6e-09 Score=92.15 Aligned_cols=134 Identities=10% Similarity=0.236 Sum_probs=107.5
Q ss_pred hhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHH
Q 025397 16 SLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYI 92 (253)
Q Consensus 16 ~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l 92 (253)
+....|+ .| +.+ |+|-+.||.. +..+|. . .+...+..++..++.+ +.|.|+-++|+..+...+
T Consensus 34 ~i~e~f~lfd~~~~-g~iD~~EL~vAmralGF-----E--~~k~ei~kll~d~dk~------~~g~i~fe~f~~~mt~k~ 99 (172)
T KOG0028|consen 34 EIKEAFELFDPDMA-GKIDVEELKVAMRALGF-----E--PKKEEILKLLADVDKE------GSGKITFEDFRRVMTVKL 99 (172)
T ss_pred hHHHHHHhhccCCC-CcccHHHHHHHHHHcCC-----C--cchHHHHHHHHhhhhc------cCceechHHHHHHHHHHH
Confidence 3336788 77 888 9999999976 665555 3 4567888899999988 899999999998655433
Q ss_pred HHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCch
Q 025397 93 TAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEF 172 (253)
Q Consensus 93 ~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~ 172 (253)
. .++ .++. +..+|+.+|-|++|+||..+|+.....||..+ . +
T Consensus 100 ~-----e~d-----------------t~eE-----i~~afrl~D~D~~Gkis~~~lkrvakeLgenl-----t------D 141 (172)
T KOG0028|consen 100 G-----ERD-----------------TKEE-----IKKAFRLFDDDKTGKISQRNLKRVAKELGENL-----T------D 141 (172)
T ss_pred h-----ccC-----------------cHHH-----HHHHHHcccccCCCCcCHHHHHHHHHHhCccc-----c------H
Confidence 2 111 2334 99999999999999999999998888877432 2 5
Q ss_pred HHHHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 173 PQLNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 173 ~~~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
.-+.+++.++|.|+||.|.++||...|++
T Consensus 142 ~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 142 EELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 67899999999999999999999999875
No 9
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.99 E-value=4.2e-10 Score=80.27 Aligned_cols=65 Identities=18% Similarity=0.482 Sum_probs=54.5
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHH
Q 025397 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELL 199 (253)
Q Consensus 128 v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lm 199 (253)
+..+|+.+|+|++|+||++||+.++..++... + ..+ ....+..+|+.+|.|+||.|+++||..+|
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~--~----~~~-~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDM--S----DEE-SDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHS--T----HHH-HHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccc--c----HHH-HHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 57899999999999999999999999977432 1 112 24567888999999999999999999876
No 10
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.91 E-value=5.3e-09 Score=80.13 Aligned_cols=70 Identities=19% Similarity=0.291 Sum_probs=58.4
Q ss_pred HHHHHhhhC-CCCCC-cccHHHHHHHHhc-cCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHH
Q 025397 128 AENLFADLD-TEDEG-KVCKGEIQNALGH-MGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 204 (253)
Q Consensus 128 v~~~F~~lD-~D~dG-~LS~~ELr~aL~~-l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~ 204 (253)
+..+|..+| .|++| +|++.||+.+|.. ++..+|..|.. ..++++|+++|.|++|.|+++||..++..+.-
T Consensus 11 l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~-------~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~~ 83 (92)
T cd05025 11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDA-------DAVDKIMKELDENGDGEVDFQEFVVLVAALTV 83 (92)
T ss_pred HHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCH-------HHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHH
Confidence 889999997 99999 5999999999975 66544433322 36899999999999999999999999987654
No 11
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.90 E-value=1.3e-08 Score=89.09 Aligned_cols=133 Identities=12% Similarity=0.073 Sum_probs=97.2
Q ss_pred CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCC
Q 025397 25 TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDP 103 (253)
Q Consensus 25 d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~P 103 (253)
-.. |.++..+++. ++.... .|=|....+-+|+.||.| ++|.|+-+||...|+-.+.+-..
T Consensus 39 cP~-G~~~~~~F~~i~~~~fp------~gd~~~y~~~vF~~fD~~------~dg~i~F~Efi~als~~~rGt~e------ 99 (193)
T KOG0044|consen 39 CPS-GRLTLEEFREIYASFFP------DGDASKYAELVFRTFDKN------KDGTIDFLEFICALSLTSRGTLE------ 99 (193)
T ss_pred CCC-CccCHHHHHHHHHHHCC------CCCHHHHHHHHHHHhccc------CCCCcCHHHHHHHHHHHcCCcHH------
Confidence 445 9999999999 664443 445778899999999999 99999977765544433322211
Q ss_pred eEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcc---cCCCCCCCCCCCchHHHHHHHH
Q 025397 104 LVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVE---FGVPPFSECRSTEFPQLNDILK 180 (253)
Q Consensus 104 i~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~---~GlPp~~~~~~~~~~~~~~if~ 180 (253)
.-+.=+|+..|.|++|.|++.|+-..+..+-.- ...|.....++ ...+.||+
T Consensus 100 ----------------------ekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~---~~v~~if~ 154 (193)
T KOG0044|consen 100 ----------------------EKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPE---ERVDKIFS 154 (193)
T ss_pred ----------------------HHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHH---HHHHHHHH
Confidence 113455999999999999999999888774332 22342222222 36899999
Q ss_pred HhccCCCcccCHHHHHHHHHH
Q 025397 181 KHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 181 e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
++|.|+||.|+.+||....+.
T Consensus 155 k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 155 KMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred HcCCCCCCcccHHHHHHHhhh
Confidence 999999999999999988774
No 12
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.87 E-value=1e-08 Score=79.33 Aligned_cols=71 Identities=15% Similarity=0.266 Sum_probs=55.8
Q ss_pred HHHHHhhhC-CCCCC-cccHHHHHHHHhc-cCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHH
Q 025397 128 AENLFADLD-TEDEG-KVCKGEIQNALGH-MGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 204 (253)
Q Consensus 128 v~~~F~~lD-~D~dG-~LS~~ELr~aL~~-l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~ 204 (253)
+..+|+.+| +|++| +||++||+.+|.+ ++..++-.+ . ...++++++++|.|+||.|+++||..+|..++-
T Consensus 12 ~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~-~------~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~~ 84 (93)
T cd05026 12 LIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQK-D------PMLVDKIMNDLDSNKDNEVDFNEFVVLVAALTV 84 (93)
T ss_pred HHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhccccc-C------HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence 556699999 78998 5999999999977 332111111 1 347899999999999999999999999998854
Q ss_pred H
Q 025397 205 D 205 (253)
Q Consensus 205 ~ 205 (253)
+
T Consensus 85 ~ 85 (93)
T cd05026 85 A 85 (93)
T ss_pred H
Confidence 3
No 13
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.84 E-value=1.7e-08 Score=78.00 Aligned_cols=72 Identities=14% Similarity=0.188 Sum_probs=61.1
Q ss_pred HHHHHHhhhCC-CCCCcccHHHHHHHHhc-cCcccCCCCCCCCCCCch-HHHHHHHHHhccCCCcccCHHHHHHHHHHHH
Q 025397 127 LAENLFADLDT-EDEGKVCKGEIQNALGH-MGVEFGVPPFSECRSTEF-PQLNDILKKHGAEGEEELGQAQFTELLRQVL 203 (253)
Q Consensus 127 ~v~~~F~~lD~-D~dG~LS~~ELr~aL~~-l~v~~GlPp~~~~~~~~~-~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL 203 (253)
.+..+|+.+|+ +++|+|+++||+..|.+ ++.- .+ + ..++++++.+|.|+||.|+++||..+|..+.
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~-----ls------~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPHL-----LK------DVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhh-----cc------CHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 37789999999 99999999999999988 6622 12 2 4689999999999999999999999999987
Q ss_pred HHHHHH
Q 025397 204 QDIVDA 209 (253)
Q Consensus 204 ~~~A~~ 209 (253)
.+....
T Consensus 78 ~~~~~~ 83 (89)
T cd05022 78 KAVKGE 83 (89)
T ss_pred HHHHHH
Confidence 766554
No 14
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.70 E-value=3.8e-08 Score=75.75 Aligned_cols=70 Identities=9% Similarity=0.142 Sum_probs=57.3
Q ss_pred HHHHHHhhhCC-CC-CCcccHHHHHHHHhc-cCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHH
Q 025397 127 LAENLFADLDT-ED-EGKVCKGEIQNALGH-MGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 203 (253)
Q Consensus 127 ~v~~~F~~lD~-D~-dG~LS~~ELr~aL~~-l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL 203 (253)
.+..+|..+|. |+ +|+|+..||+.+|.. ++...|.+|.. ..++.+++++|.|++|.|+++||+.+|..+-
T Consensus 9 ~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~-------~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~ 81 (94)
T cd05031 9 SLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDP-------MAVDKIMKDLDQNRDGKVNFEEFVSLVAGLS 81 (94)
T ss_pred HHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccH-------HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 47889999997 97 799999999999986 44334444333 3688999999999999999999999988653
No 15
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.70 E-value=6.6e-08 Score=74.59 Aligned_cols=71 Identities=14% Similarity=0.246 Sum_probs=55.6
Q ss_pred HHHHHhh-hCCCCCC-cccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHH
Q 025397 128 AENLFAD-LDTEDEG-KVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 204 (253)
Q Consensus 128 v~~~F~~-lD~D~dG-~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~ 204 (253)
+..+|.. .|+|++| +||++||+.++.+....+ ..... ....++++++++|.|+||.|+++||..+|.++.-
T Consensus 11 l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~-----~~~~~-~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~~ 83 (89)
T cd05023 11 LIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASF-----TKNQK-DPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLAV 83 (89)
T ss_pred HHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHh-----hcCCC-CHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 6788999 8898876 999999999998843211 10011 1357899999999999999999999999988743
No 16
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.69 E-value=1.1e-07 Score=67.17 Aligned_cols=64 Identities=20% Similarity=0.420 Sum_probs=55.3
Q ss_pred HHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHH
Q 025397 129 ENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQD 205 (253)
Q Consensus 129 ~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~ 205 (253)
..+|..+|+|++|.|+.+|++.++..++ +| ...+..+++.+|.+++|.|+++||..++..+..+
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g----~~---------~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~~~~ 65 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG----LP---------RSVLAQIWDLADTDKDGKLDKEEFAIAMHLIALA 65 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC----CC---------HHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999998754 32 2357899999999999999999999999887654
No 17
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.67 E-value=1.1e-07 Score=73.11 Aligned_cols=72 Identities=13% Similarity=0.243 Sum_probs=56.9
Q ss_pred HHHHHHhhhC-CCCCC-cccHHHHHHHHhc-cCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHH
Q 025397 127 LAENLFADLD-TEDEG-KVCKGEIQNALGH-MGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 203 (253)
Q Consensus 127 ~v~~~F~~lD-~D~dG-~LS~~ELr~aL~~-l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL 203 (253)
.+..+|+.+| .|++| +|++.||+.+|.. ++.-.|-++ + ...++++++++|.|++|.|+++||..++..++
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~-~------~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~ 81 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIK-E------QEVVDKVMETLDSDGDGECDFQEFMAFVAMVT 81 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCC-C------HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 3788999998 79999 5999999999987 111112222 1 23589999999999999999999999998876
Q ss_pred HH
Q 025397 204 QD 205 (253)
Q Consensus 204 ~~ 205 (253)
.+
T Consensus 82 ~~ 83 (88)
T cd05027 82 TA 83 (88)
T ss_pred HH
Confidence 54
No 18
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=98.60 E-value=2.9e-07 Score=88.25 Aligned_cols=144 Identities=18% Similarity=0.249 Sum_probs=113.6
Q ss_pred cccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHH
Q 025397 19 QPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAI 95 (253)
Q Consensus 19 ~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~i 95 (253)
..|. || +++ |.+...+|.+ ++.+.- . ..|......+|+.+|.| ++|.+|-++|+. |+.+=
T Consensus 18 ~lf~~lD~~~~-g~~d~~~l~k~~~~l~~-----~-~~~~~~~~~l~~~~d~~------~dg~vDy~eF~~----Y~~~~ 80 (463)
T KOG0036|consen 18 CLFKELDSKND-GQVDLDQLEKGLEKLDH-----P-KPNYEAAKMLFSAMDAN------RDGRVDYSEFKR----YLDNK 80 (463)
T ss_pred HHHHHhccCCC-CceeHHHHHHHHHhcCC-----C-CCchHHHHHHHHhcccC------cCCcccHHHHHH----HHHHh
Confidence 6799 99 899 9999999999 775544 3 13467788899999999 999999999988 66532
Q ss_pred HhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHH
Q 025397 96 ADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQL 175 (253)
Q Consensus 96 A~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~ 175 (253)
- ..+...|+.+|.++||.|..+||.+.|..+++.+ + +...
T Consensus 81 E-----------------------------~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l-----~------de~~ 120 (463)
T KOG0036|consen 81 E-----------------------------LELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQL-----S------DEKA 120 (463)
T ss_pred H-----------------------------HHHHHHHhhhccccCCccCHHHHHHHHHHhCCcc-----C------HHHH
Confidence 2 2267899999999999999999999999977653 2 4566
Q ss_pred HHHHHHhccCCCcccCHHHHHHHHH----HHHHHHHHHhccCCeEEEe
Q 025397 176 NDILKKHGAEGEEELGQAQFTELLR----QVLQDIVDALADKHIIIIP 219 (253)
Q Consensus 176 ~~if~e~D~d~dg~Vd~eEF~~lmk----~iL~~~A~~L~~~PV~v~~ 219 (253)
..+|+..|.++.+.|+.+||+..+. .-+..+-..-+..-++.++
T Consensus 121 ~k~~e~~d~~g~~~I~~~e~rd~~ll~p~s~i~di~~~W~h~~~idig 168 (463)
T KOG0036|consen 121 AKFFEHMDKDGKATIDLEEWRDHLLLYPESDLEDIYDFWRHVLLIDIG 168 (463)
T ss_pred HHHHHHhccCCCeeeccHHHHhhhhcCChhHHHHHHHhhhhheEEEcc
Confidence 7799999999999999999998876 3355555555555566655
No 19
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.58 E-value=4.1e-07 Score=75.52 Aligned_cols=108 Identities=9% Similarity=0.130 Sum_probs=84.9
Q ss_pred HHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhh
Q 025397 56 NLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADL 135 (253)
Q Consensus 56 ~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~l 135 (253)
..+..+|+.||.+ ++|.|+..++...|+..-.. . -+..+..+++++
T Consensus 8 ~el~~~F~~fD~d------~~G~i~~~el~~~lr~lg~~-----------------------~-----t~~el~~~~~~~ 53 (151)
T KOG0027|consen 8 LELKEAFQLFDKD------GDGKISVEELGAVLRSLGQN-----------------------P-----TEEELRDLIKEI 53 (151)
T ss_pred HHHHHHHHHHCCC------CCCcccHHHHHHHHHHcCCC-----------------------C-----CHHHHHHHHHHh
Confidence 4688999999999 89999988888855543222 1 234599999999
Q ss_pred CCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHH
Q 025397 136 DTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 203 (253)
Q Consensus 136 D~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL 203 (253)
|.|++|.|+..|+...+.+......... . ....+.++|+.+|.|++|.|+.+|++..|+..-
T Consensus 54 D~dg~g~I~~~eF~~l~~~~~~~~~~~~-----~-~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg 115 (151)
T KOG0027|consen 54 DLDGDGTIDFEEFLDLMEKLGEEKTDEE-----A-SSEELKEAFRVFDKDGDGFISASELKKVLTSLG 115 (151)
T ss_pred CCCCCCeEcHHHHHHHHHhhhccccccc-----c-cHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC
Confidence 9999999999999999988654321111 1 134689999999999999999999999988653
No 20
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.56 E-value=2.1e-07 Score=71.55 Aligned_cols=70 Identities=10% Similarity=0.216 Sum_probs=56.4
Q ss_pred HHHHHhhhCC-CC-CCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHH
Q 025397 128 AENLFADLDT-ED-EGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQD 205 (253)
Q Consensus 128 v~~~F~~lD~-D~-dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~ 205 (253)
+..+|.++|. ++ +|+|+.+||+.+|.+. ..+|.+++ ...++++++.+|.|++|.|+++||..+|..+..+
T Consensus 12 ~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~-~~lg~k~t-------~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~~~ 83 (88)
T cd05029 12 LVAIFHKYSGREGDKNTLSKKELKELIQKE-LTIGSKLQ-------DAEIAKLMEDLDRNKDQEVNFQEYVTFLGALALI 83 (88)
T ss_pred HHHHHHHHHccCCCCCEECHHHHHHHHHHH-HhcCCCCC-------HHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHH
Confidence 6688999998 66 8999999999999641 01343322 2468899999999999999999999999988765
No 21
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.50 E-value=5.6e-07 Score=69.41 Aligned_cols=67 Identities=21% Similarity=0.367 Sum_probs=55.8
Q ss_pred HHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHH
Q 025397 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQD 205 (253)
Q Consensus 126 ~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~ 205 (253)
..+..+|..+|.|++|.|+.++++.+|... |++ ...+..++..+|.+++|.|+++||..+|+.+-..
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~---------~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~ 76 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLP---------QTLLAKIWNLADIDNDGELDKDEFALAMHLIYRK 76 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCC---------HHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHH
Confidence 358899999999999999999999999874 433 2357789999999999999999999877655443
No 22
>PTZ00183 centrin; Provisional
Probab=98.49 E-value=1.8e-06 Score=70.11 Aligned_cols=103 Identities=8% Similarity=0.087 Sum_probs=78.9
Q ss_pred HHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhh
Q 025397 56 NLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADL 135 (253)
Q Consensus 56 ~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~l 135 (253)
..+..+|..+|.+ ++|.|+.++|...++.+ ++.. -...+..+|+.+
T Consensus 17 ~~~~~~F~~~D~~------~~G~i~~~e~~~~l~~~------g~~~----------------------~~~~~~~l~~~~ 62 (158)
T PTZ00183 17 KEIREAFDLFDTD------GSGTIDPKELKVAMRSL------GFEP----------------------KKEEIKQMIADV 62 (158)
T ss_pred HHHHHHHHHhCCC------CCCcccHHHHHHHHHHh------CCCC----------------------CHHHHHHHHHHh
Confidence 3567789999999 89999999999966533 2211 112488999999
Q ss_pred CCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHH
Q 025397 136 DTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 202 (253)
Q Consensus 136 D~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~i 202 (253)
|.+++|+|+..+...++.... ++.. ....+..+|+.+|.+++|.|+.+||...++..
T Consensus 63 d~~~~g~i~~~eF~~~~~~~~-----~~~~-----~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~ 119 (158)
T PTZ00183 63 DKDGSGKIDFEEFLDIMTKKL-----GERD-----PREEILKAFRLFDDDKTGKISLKNLKRVAKEL 119 (158)
T ss_pred CCCCCCcEeHHHHHHHHHHHh-----cCCC-----cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 999999999999998876522 1111 12357899999999999999999999888753
No 23
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.47 E-value=2.2e-06 Score=69.43 Aligned_cols=62 Identities=11% Similarity=0.172 Sum_probs=52.1
Q ss_pred HHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHH
Q 025397 124 FTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLR 200 (253)
Q Consensus 124 f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk 200 (253)
....+.-+|..+|.|+||+||++||.++. +. | . ...+..+|+.+|.|+||.||++||+..+.
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~-----~-~-------e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR--LD-----P-N-------EHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH--cc-----c-h-------HHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 55668999999999999999999999775 11 1 1 24678899999999999999999999873
No 24
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.44 E-value=8.7e-07 Score=66.91 Aligned_cols=69 Identities=13% Similarity=0.214 Sum_probs=55.7
Q ss_pred HHHHHHhhhCC--CCCCcccHHHHHHHHhc-cCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHH
Q 025397 127 LAENLFADLDT--EDEGKVCKGEIQNALGH-MGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 202 (253)
Q Consensus 127 ~v~~~F~~lD~--D~dG~LS~~ELr~aL~~-l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~i 202 (253)
.+..+|..+|+ |++|.|+.+|++.++.. ++...+.++ . ...++.+++.+|.+++|.|+++||..++...
T Consensus 9 ~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~-~------~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 9 TIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQK-D------PEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCC-C------HHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 37788999999 89999999999999975 442222111 1 3468899999999999999999999999876
No 25
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.38 E-value=1.7e-06 Score=75.86 Aligned_cols=110 Identities=13% Similarity=0.150 Sum_probs=85.2
Q ss_pred hhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHH
Q 025397 12 TQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (253)
Q Consensus 12 ~~l~~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l 88 (253)
+...+++ |. .| |+| |+++..|+.. |..+-- |.++.-..-+|+-+|.| ++|.|+++|+..
T Consensus 63 ~~y~~~v--F~~fD~~~d-g~i~F~Efi~als~~~r-------Gt~eekl~w~F~lyD~d------gdG~It~~Eml~-- 124 (193)
T KOG0044|consen 63 SKYAELV--FRTFDKNKD-GTIDFLEFICALSLTSR-------GTLEEKLKWAFRLYDLD------GDGYITKEEMLK-- 124 (193)
T ss_pred HHHHHHH--HHHhcccCC-CCcCHHHHHHHHHHHcC-------CcHHHHhhhhheeecCC------CCceEcHHHHHH--
Confidence 3444444 99 99 999 9999999776 443322 35666666779999999 999999999988
Q ss_pred HHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhc
Q 025397 89 SDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGH 154 (253)
Q Consensus 89 ~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~ 154 (253)
|+.+|+...+. ...-+++..=+..++.+|+.+|+|+||.||.+|...+...
T Consensus 125 --iv~~i~~m~~~-------------~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 125 --IVQAIYQMTGS-------------KALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred --HHHHHHHHccc-------------ccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 88888877776 2222455556778999999999999999999999977654
No 26
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.36 E-value=1.5e-06 Score=58.20 Aligned_cols=61 Identities=20% Similarity=0.461 Sum_probs=52.2
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHH
Q 025397 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELL 199 (253)
Q Consensus 128 v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lm 199 (253)
+..+|..+|.+++|.|+..+++.++..++ .++ . ...+..+++.+|.+++|.|+++||...+
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~----~~~-~------~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG----EGL-S------EEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC----CCC-C------HHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 56789999999999999999999998855 332 2 3467889999999999999999998765
No 27
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.36 E-value=1.1e-06 Score=60.53 Aligned_cols=53 Identities=17% Similarity=0.521 Sum_probs=44.1
Q ss_pred CCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 139 DEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 139 ~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
++|.|++++++.+|..+|. +..+ ...++.+|..+|.|++|.|+++||+.+|+.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~----~~~s------~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGI----KDLS------EEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTS----SSSC------HHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCC----CCCC------HHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 4799999999999976553 3122 346899999999999999999999999875
No 28
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.20 E-value=7.2e-06 Score=76.56 Aligned_cols=144 Identities=15% Similarity=0.176 Sum_probs=96.5
Q ss_pred hhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHH---hhcCCCCcccccccccCHHHHHHHHHH
Q 025397 17 LSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALK---HISGSDDDVTFRIKEFDRDHASKLASD 90 (253)
Q Consensus 17 l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~---~~d~~~~~~~~~~g~i~~~eF~~~l~~ 90 (253)
+..+|. +| ++| |.+|.+||+. ++.+-. ..+++.+-+ ..+.| .+|.|+-+++...+-.
T Consensus 79 l~~l~~~iD~~~D-gfv~~~El~~wi~~s~k----------~~v~~~~~~~~~~~d~~------~Dg~i~~eey~~~~~~ 141 (325)
T KOG4223|consen 79 LGKLVPKIDSDSD-GFVTESELKAWIMQSQK----------KYVVEEAARRWDEYDKN------KDGFITWEEYLPQTYG 141 (325)
T ss_pred HHHHHhhhcCCCC-CceeHHHHHHHHHHHHH----------HHHHHHHHHHHHHhccC------ccceeeHHHhhhhhhh
Confidence 335677 99 889 9999999999 665544 445444444 44555 8999997777664332
Q ss_pred HHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCC
Q 025397 91 YITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRST 170 (253)
Q Consensus 91 ~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~ 170 (253)
+-. +. +=..-..++.+-++.+.. -...|+.-|.|+||.|+++|+-.+|- | ...|.|
T Consensus 142 ~~~-----~~--~~~~d~e~~~~~~km~~r-------De~rFk~AD~d~dg~lt~EEF~aFLH---------P-Ee~p~M 197 (325)
T KOG4223|consen 142 RVD-----LP--DEFPDEEDNEEYKKMIAR-------DEERFKAADQDGDGSLTLEEFTAFLH---------P-EEHPHM 197 (325)
T ss_pred ccc-----Cc--cccccchhcHHHHHHHHH-------HHHHHhhcccCCCCcccHHHHHhccC---------h-hhcchH
Confidence 211 00 001112333333333322 23689999999999999999996641 1 334555
Q ss_pred chHHHHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 171 EFPQLNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 171 ~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
..+++.+-+.+.|+|+||.|+++||..-|-.
T Consensus 198 ~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~ 228 (325)
T KOG4223|consen 198 KDIVIAETLEDIDKNGDGKISLEEFIGDLYS 228 (325)
T ss_pred HHHHHHHHHhhcccCCCCceeHHHHHhHHhh
Confidence 5667788889999999999999999877654
No 29
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=98.18 E-value=4.2e-06 Score=81.16 Aligned_cols=149 Identities=16% Similarity=0.186 Sum_probs=96.6
Q ss_pred cccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHH
Q 025397 19 QPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIA 96 (253)
Q Consensus 19 ~~F~-LD-d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA 96 (253)
.-|. .| ... |+||.+.-...++.-- ++++|=..+.+=+...+. +|.|- |....-
T Consensus 468 ~eF~~~D~~ks-G~lsis~Wa~~mE~i~-----~L~LPWr~L~~kla~~s~--------d~~v~----------Y~~~~~ 523 (631)
T KOG0377|consen 468 DEFRKYDPKKS-GKLSISHWAKCMENIT-----GLNLPWRLLRPKLANGSD--------DGKVE----------YKSTLD 523 (631)
T ss_pred HHHHhcChhhc-CeeeHHHHHHHHHHHh-----cCCCcHHHhhhhccCCCc--------Cccee----------hHhHHH
Confidence 6688 88 666 9999999888444433 788995444443333222 33443 211111
Q ss_pred hHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHH
Q 025397 97 DELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLN 176 (253)
Q Consensus 97 ~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~ 176 (253)
.-=.+.|+.- -|+.|.+.+= .....++.+|+.+|+|++|.||.+|.+.+.+-++.++..|-. +..+.
T Consensus 524 ~l~~e~~~~e---a~~slvetLY---r~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~-------~~~i~ 590 (631)
T KOG0377|consen 524 NLDTEVILEE---AGSSLVETLY---RNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAIS-------DDEIL 590 (631)
T ss_pred HhhhhhHHHH---HHhHHHHHHH---hchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcC-------HHHHH
Confidence 1111111111 1333333321 133468999999999999999999999999988877654422 34677
Q ss_pred HHHHHhccCCCcccCHHHHHHHHHHHHH
Q 025397 177 DILKKHGAEGEEELGQAQFTELLRQVLQ 204 (253)
Q Consensus 177 ~if~e~D~d~dg~Vd~eEF~~lmk~iL~ 204 (253)
++-...|-|+||.||..||++.++=+-.
T Consensus 591 ~la~~mD~NkDG~IDlNEfLeAFrlvdr 618 (631)
T KOG0377|consen 591 ELARSMDLNKDGKIDLNEFLEAFRLVDR 618 (631)
T ss_pred HHHHhhccCCCCcccHHHHHHHHhhhcc
Confidence 7778899999999999999999885533
No 30
>PTZ00184 calmodulin; Provisional
Probab=98.16 E-value=3.6e-05 Score=61.41 Aligned_cols=102 Identities=9% Similarity=0.173 Sum_probs=77.3
Q ss_pred HHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhC
Q 025397 57 LKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLD 136 (253)
Q Consensus 57 ~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD 136 (253)
.+...|..+|.+ ++|.|+.++|...++. ++..| . +..+..+|+.+|
T Consensus 12 ~~~~~F~~~D~~------~~G~i~~~e~~~~l~~--------~~~~~---------------~-----~~~~~~~~~~~d 57 (149)
T PTZ00184 12 EFKEAFSLFDKD------GDGTITTKELGTVMRS--------LGQNP---------------T-----EAELQDMINEVD 57 (149)
T ss_pred HHHHHHHHHcCC------CCCcCCHHHHHHHHHH--------hCCCC---------------C-----HHHHHHHHHhcC
Confidence 466788889999 8999999999885432 23211 1 134899999999
Q ss_pred CCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHH
Q 025397 137 TEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 202 (253)
Q Consensus 137 ~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~i 202 (253)
.+++|.|+.++...++...... .. ....+..+|+.+|.+++|.|+.+||...++.+
T Consensus 58 ~~~~g~i~~~ef~~~l~~~~~~-----~~-----~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~ 113 (149)
T PTZ00184 58 ADGNGTIDFPEFLTLMARKMKD-----TD-----SEEEIKEAFKVFDRDGNGFISAAELRHVMTNL 113 (149)
T ss_pred cCCCCcCcHHHHHHHHHHhccC-----Cc-----HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHH
Confidence 9999999999999887653210 11 12357889999999999999999999888753
No 31
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.15 E-value=3.7e-06 Score=59.71 Aligned_cols=65 Identities=12% Similarity=0.287 Sum_probs=51.5
Q ss_pred HHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCC
Q 025397 58 KSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDT 137 (253)
Q Consensus 58 ~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~ 137 (253)
+..+|+.+|.| ++|.|+.+||...++.+...+. +......+..+|+.+|+
T Consensus 2 l~~~F~~~D~d------~~G~i~~~el~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~D~ 51 (66)
T PF13499_consen 2 LKEAFKKFDKD------GDGYISKEELRRALKHLGRDMS------------------------DEESDEMIDQIFREFDT 51 (66)
T ss_dssp HHHHHHHHSTT------SSSEEEHHHHHHHHHHTTSHST------------------------HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCC------ccCCCCHHHHHHHHHHhccccc------------------------HHHHHHHHHHHHHHhCC
Confidence 56799999999 9999999999885544332221 34455678999999999
Q ss_pred CCCCcccHHHHHHHH
Q 025397 138 EDEGKVCKGEIQNAL 152 (253)
Q Consensus 138 D~dG~LS~~ELr~aL 152 (253)
|+||.||.+|+..++
T Consensus 52 d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 52 DGDGRISFDEFLNFM 66 (66)
T ss_dssp TSSSSEEHHHHHHHH
T ss_pred CCcCCCcHHHHhccC
Confidence 999999999998764
No 32
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.11 E-value=1.3e-05 Score=61.27 Aligned_cols=71 Identities=14% Similarity=0.132 Sum_probs=53.6
Q ss_pred HHHHHhhhCCC--CCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHH
Q 025397 128 AENLFADLDTE--DEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 204 (253)
Q Consensus 128 v~~~F~~lD~D--~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~ 204 (253)
+...|.+.+.. ++|+||++||+.+|.+.. |-+++.. . ....++++|+.+|.|++|.|+++||..+|..++.
T Consensus 10 ~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~---g~~~t~~--~-~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~~ 82 (88)
T cd05030 10 IINVFHQYSVRKGHPDTLYKKEFKQLVEKEL---PNFLKKE--K-NQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVGV 82 (88)
T ss_pred HHHHHHHHhccCCCcccCCHHHHHHHHHHHh---hHhhccC--C-CHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 55678888865 489999999999997422 2112110 1 1346899999999999999999999999987754
No 33
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.09 E-value=9.9e-06 Score=75.64 Aligned_cols=149 Identities=13% Similarity=0.174 Sum_probs=98.0
Q ss_pred cccc-CC-CCCCccccHHHHHHHHHccccccccCCCCC---hHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHH
Q 025397 19 QPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLP---QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYIT 93 (253)
Q Consensus 19 ~~F~-LD-d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp---~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~ 93 (253)
.+|+ -| |+| |.||+.|+-.+.+=. ..| +-++..-|...|.| ++|.|+.+||.--|
T Consensus 167 ~rFk~AD~d~d-g~lt~EEF~aFLHPE--------e~p~M~~iVi~Etl~d~Dkn------~DG~I~~eEfigd~----- 226 (325)
T KOG4223|consen 167 ERFKAADQDGD-GSLTLEEFTAFLHPE--------EHPHMKDIVIAETLEDIDKN------GDGKISLEEFIGDL----- 226 (325)
T ss_pred HHHhhcccCCC-CcccHHHHHhccChh--------hcchHHHHHHHHHHhhcccC------CCCceeHHHHHhHH-----
Confidence 7899 99 999 999999999832111 022 35788889999999 99999977775422
Q ss_pred HHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchH
Q 025397 94 AIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFP 173 (253)
Q Consensus 94 ~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~ 173 (253)
...=+ ++.=...+-.| -+..|...|+|+||+|+.+||+.-+ +|.-.+-.+ .
T Consensus 227 --~~~~~----------~~~epeWv~~E------re~F~~~~DknkDG~L~~dEl~~WI--------~P~~~d~A~---~ 277 (325)
T KOG4223|consen 227 --YSHEG----------NEEEPEWVLTE------REQFFEFRDKNKDGKLDGDELLDWI--------LPSEQDHAK---A 277 (325)
T ss_pred --hhccC----------CCCCccccccc------HHHHHHHhhcCCCCccCHHHHhccc--------CCCCccHHH---H
Confidence 22111 11112333333 4677888899999999999999332 343221111 1
Q ss_pred HHHHHHHHhccCCCcccCHHHHHHHHHHHHHHHHHHhccCCeEEEeccccccChhHHH
Q 025397 174 QLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRM 231 (253)
Q Consensus 174 ~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~~A~~L~~~PV~v~~~~~~~dGs~l~~ 231 (253)
.-.-++-+.|.|+||++|++|-++ +|=+.+-++-|-.|..|-+
T Consensus 278 EA~hL~~eaD~dkD~kLs~eEIl~---------------~~d~FvgSqAtdyge~L~~ 320 (325)
T KOG4223|consen 278 EARHLLHEADEDKDGKLSKEEILE---------------HYDVFVGSQATDYGEDLDY 320 (325)
T ss_pred HHHHHhhhhccCccccccHHHHhh---------------Ccceeeeeecccchhhccc
Confidence 235588999999999999998542 4444555555555555443
No 34
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.06 E-value=5.1e-05 Score=63.62 Aligned_cols=137 Identities=14% Similarity=0.293 Sum_probs=99.4
Q ss_pred hHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCC-hHHHHHHHHhhcCCCCcccccccccCHHHHHHHH
Q 025397 13 QLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLP-QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (253)
Q Consensus 13 ~l~~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp-~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l 88 (253)
.+.+|.++|. .| .+| |+|++++.-+ |--+|. =| +..+...+.++..+- ..-..++-|+|.-
T Consensus 9 ~~~e~ke~F~lfD~~gD-~ki~~~q~gdvlRalG~--------nPT~aeV~k~l~~~~~~~----~~~~rl~FE~fLp-- 73 (152)
T KOG0030|consen 9 QMEEFKEAFLLFDRTGD-GKISGSQVGDVLRALGQ--------NPTNAEVLKVLGQPKRRE----MNVKRLDFEEFLP-- 73 (152)
T ss_pred hHHHHHHHHHHHhccCc-ccccHHHHHHHHHHhcC--------CCcHHHHHHHHcCcccch----hhhhhhhHHHHHH--
Confidence 4567889999 89 999 9999999998 554554 25 567777787765550 0125788888887
Q ss_pred HHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCC
Q 025397 89 SDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECR 168 (253)
Q Consensus 89 ~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~ 168 (253)
+++.+|.. . +...++.++ .-.+-||++++|.|...|||..|-.+|--+ +
T Consensus 74 --m~q~vakn--k------------------~q~t~edfv-egLrvFDkeg~G~i~~aeLRhvLttlGekl-----~--- 122 (152)
T KOG0030|consen 74 --MYQQVAKN--K------------------DQGTYEDFV-EGLRVFDKEGNGTIMGAELRHVLTTLGEKL-----T--- 122 (152)
T ss_pred --HHHHHHhc--c------------------ccCcHHHHH-HHHHhhcccCCcceeHHHHHHHHHHHHhhc-----c---
Confidence 66677765 1 222344444 346889999999999999999999988543 1
Q ss_pred CCchHHHHHHHHHhccCCCcccCHHHHHHHH
Q 025397 169 STEFPQLNDILKKHGAEGEEELGQAQFTELL 199 (253)
Q Consensus 169 ~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lm 199 (253)
+.-++.+++-. .|.+|.|+|+.|.+.+
T Consensus 123 ---eeEVe~Llag~-eD~nG~i~YE~fVk~i 149 (152)
T KOG0030|consen 123 ---EEEVEELLAGQ-EDSNGCINYEAFVKHI 149 (152)
T ss_pred ---HHHHHHHHccc-cccCCcCcHHHHHHHH
Confidence 23466777765 5678999999998654
No 35
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.92 E-value=4e-05 Score=59.81 Aligned_cols=71 Identities=14% Similarity=0.238 Sum_probs=53.3
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHH
Q 025397 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQD 205 (253)
Q Consensus 128 v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~ 205 (253)
+..+|...-.+ .|+||+.||+..+.+ -+|+.-.... +...++++++..|.|+||.|+++||..++-.+..+
T Consensus 10 lI~~FhkYaG~-~~tLsk~Elk~Ll~~-----Elp~~l~~~~-d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~~a 80 (91)
T cd05024 10 MMLTFHKFAGE-KNYLNRDDLQKLMEK-----EFSEFLKNQN-DPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLLIA 80 (91)
T ss_pred HHHHHHHHcCC-CCcCCHHHHHHHHHH-----HhHHHHcCCC-CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHH
Confidence 55678877744 679999999999876 1221111111 24578999999999999999999999999988654
No 36
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=97.80 E-value=8.6e-05 Score=63.46 Aligned_cols=68 Identities=19% Similarity=0.378 Sum_probs=56.2
Q ss_pred HHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHH
Q 025397 124 FTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 203 (253)
Q Consensus 124 f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL 203 (253)
--..+..+|+-+|.|++|.|++.+|..++..+| -+|+. +.+..++..+|. +.+.|++.+|..+|...+
T Consensus 18 qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg----~~~s~-------~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~ 85 (160)
T COG5126 18 QIQELKEAFQLFDRDSDGLIDRNELGKILRSLG----FNPSE-------AEINKLFEEIDA-GNETVDFPEFLTVMSVKL 85 (160)
T ss_pred HHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcC----CCCcH-------HHHHHHHHhccC-CCCccCHHHHHHHHHHHh
Confidence 445689999999999999999999999998644 33333 478899999988 889999999998887655
No 37
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.73 E-value=3.2e-05 Score=47.85 Aligned_cols=28 Identities=18% Similarity=0.455 Sum_probs=25.7
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHhcc
Q 025397 128 AENLFADLDTEDEGKVCKGEIQNALGHM 155 (253)
Q Consensus 128 v~~~F~~lD~D~dG~LS~~ELr~aL~~l 155 (253)
+..+|+.+|+|+||+||.+|++.++.+|
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 7889999999999999999999998763
No 38
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=97.72 E-value=0.00013 Score=56.18 Aligned_cols=75 Identities=25% Similarity=0.269 Sum_probs=61.0
Q ss_pred hhhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHH
Q 025397 11 GTQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKL 87 (253)
Q Consensus 11 G~~l~~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~ 87 (253)
-+++..+.+.|. +| +++ |.||..|++. +..+ ++|+..+..++..++.+ ++|.|+.++|..
T Consensus 6 ~~~~~~l~~~F~~~D~d~~-G~Is~~el~~~l~~~---------~~~~~ev~~i~~~~d~~------~~g~I~~~eF~~- 68 (96)
T smart00027 6 PEDKAKYEQIFRSLDKNQD-GTVTGAQAKPILLKS---------GLPQTLLAKIWNLADID------NDGELDKDEFAL- 68 (96)
T ss_pred HHHHHHHHHHHHHhCCCCC-CeEeHHHHHHHHHHc---------CCCHHHHHHHHHHhcCC------CCCCcCHHHHHH-
Confidence 457788889999 99 999 9999999999 5432 35778888999999999 899999999998
Q ss_pred HHHHHHHHHhHhCCCCeE
Q 025397 88 ASDYITAIADELKDDPLV 105 (253)
Q Consensus 88 l~~~l~~iA~~L~~~Pi~ 105 (253)
++..++......||-
T Consensus 69 ---~~~~~~~~~~g~~~~ 83 (96)
T smart00027 69 ---AMHLIYRKLNGYPIP 83 (96)
T ss_pred ---HHHHHHHHHcCCCCC
Confidence 666666666666553
No 39
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.68 E-value=3.5e-05 Score=47.67 Aligned_cols=27 Identities=15% Similarity=0.582 Sum_probs=25.1
Q ss_pred HHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 175 LNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 175 ~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
+..+|+.+|.|+||.|+++||+.+|++
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 568999999999999999999999986
No 40
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=97.67 E-value=0.00021 Score=63.42 Aligned_cols=107 Identities=17% Similarity=0.208 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHH----HHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCC
Q 025397 86 KLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFT----MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGV 161 (253)
Q Consensus 86 ~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~----~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~Gl 161 (253)
.++...+.....-....|+.+-..++-.+-..-..=..|+ +-+.++|++.|.|.||+|+-.||+-.|+++| +
T Consensus 55 ~el~~~l~rr~~ines~~~~~~~r~s~kv~n~yteF~eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLg----a 130 (244)
T KOG0041|consen 55 QELSANLIRRDDINESQGAGVPSRDSLKVFNVYTEFSEFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLG----A 130 (244)
T ss_pred HHHHHHHHHHHHHhhccccCCcccccccccchhhhhhHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhC----C
Confidence 3444444445555556666666555532222111111233 3578999999999999999999999999965 4
Q ss_pred CCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHH
Q 025397 162 PPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 203 (253)
Q Consensus 162 Pp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL 203 (253)
| .. ..-..++++++|.|.||++++.||.=.+++.+
T Consensus 131 p-QT------HL~lK~mikeVded~dgklSfreflLIfrkaa 165 (244)
T KOG0041|consen 131 P-QT------HLGLKNMIKEVDEDFDGKLSFREFLLIFRKAA 165 (244)
T ss_pred c-hh------hHHHHHHHHHhhcccccchhHHHHHHHHHHHh
Confidence 4 11 33479999999999999999999998888764
No 41
>PLN02964 phosphatidylserine decarboxylase
Probab=97.66 E-value=0.00012 Score=74.50 Aligned_cols=99 Identities=17% Similarity=0.174 Sum_probs=73.1
Q ss_pred ehhhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCCh-H---HHHHHHHhhcCCCCcccccccccCHH
Q 025397 10 DGTQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQ-N---LKSTALKHISGSDDDVTFRIKEFDRD 82 (253)
Q Consensus 10 DG~~l~~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~-~---~~~~~l~~~d~~~~~~~~~~g~i~~~ 82 (253)
+-+++.++.+.|. +| |+| |++ +.. +..+|. . -|. . ..+.+|+.+|.| ++|.|+.+
T Consensus 138 ~~kqi~elkeaF~lfD~dgd-G~i----Lg~ilrslG~------~-~pte~e~~fi~~mf~~~D~D------gdG~Idfd 199 (644)
T PLN02964 138 VTQEPESACESFDLLDPSSS-NKV----VGSIFVSCSI------E-DPVETERSFARRILAIVDYD------EDGQLSFS 199 (644)
T ss_pred cHHHHHHHHHHHHHHCCCCC-CcC----HHHHHHHhCC------C-CCCHHHHHHHHHHHHHhCCC------CCCeEcHH
Confidence 4456777778899 99 999 986 444 333331 1 242 2 378999999999 89999999
Q ss_pred HHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhc
Q 025397 83 HASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGH 154 (253)
Q Consensus 83 eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~ 154 (253)
||...|.. ++.. ...+ .+..+|+.+|.|++|+|+.+||+.+|..
T Consensus 200 EFl~lL~~--------lg~~---------------~seE-----EL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 200 EFSDLIKA--------FGNL---------------VAAN-----KKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred HHHHHHHH--------hccC---------------CCHH-----HHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 99885542 2220 1122 3999999999999999999999999988
No 42
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=97.56 E-value=0.00041 Score=58.94 Aligned_cols=105 Identities=13% Similarity=0.198 Sum_probs=82.2
Q ss_pred HHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhC
Q 025397 57 LKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLD 136 (253)
Q Consensus 57 ~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD 136 (253)
-.+.|.+-|..| ++|.++-+.|..-++-+-+-.-..|| +.=+|+..|
T Consensus 72 fk~ri~e~FSeD------G~GnlsfddFlDmfSV~sE~APrdlK---------------------------~~YAFkIYD 118 (189)
T KOG0038|consen 72 FKRRICEVFSED------GRGNLSFDDFLDMFSVFSEMAPRDLK---------------------------AKYAFKIYD 118 (189)
T ss_pred HHHHHHHHhccC------CCCcccHHHHHHHHHHHHhhChHHhh---------------------------hhheeEEee
Confidence 456677778888 89999999999866644433333333 567899999
Q ss_pred CCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHH
Q 025397 137 TEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLR 200 (253)
Q Consensus 137 ~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk 200 (253)
-|+|+.|....|...+.+++.. ++.+ ++ ...+.+.++.+.|-|+||+++.+||..++.
T Consensus 119 fd~D~~i~~~DL~~~l~~lTr~-eLs~----eE-v~~i~ekvieEAD~DgDgkl~~~eFe~~i~ 176 (189)
T KOG0038|consen 119 FDGDEFIGHDDLEKTLTSLTRD-ELSD----EE-VELICEKVIEEADLDGDGKLSFAEFEHVIL 176 (189)
T ss_pred cCCCCcccHHHHHHHHHHHhhc-cCCH----HH-HHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Confidence 9999999999999999998864 3332 22 255679999999999999999999998764
No 43
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=97.55 E-value=0.00018 Score=69.74 Aligned_cols=32 Identities=6% Similarity=0.235 Sum_probs=28.0
Q ss_pred hHHHHHHHHHhccCCCcccCHHHHHHHHHHHH
Q 025397 172 FPQLNDILKKHGAEGEEELGQAQFTELLRQVL 203 (253)
Q Consensus 172 ~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL 203 (253)
+++++-||.=||.|+||.+|.+||..+|+.=|
T Consensus 424 dhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~Rm 455 (489)
T KOG2643|consen 424 DHVVDVVFTIFDENNDGTLSHKEFLAVMKRRM 455 (489)
T ss_pred cceeeeEEEEEccCCCCcccHHHHHHHHHHHh
Confidence 35777788999999999999999999999654
No 44
>PLN02964 phosphatidylserine decarboxylase
Probab=97.53 E-value=0.00055 Score=69.78 Aligned_cols=137 Identities=10% Similarity=0.163 Sum_probs=92.1
Q ss_pred ccccHHHHHHHHHccccccccCCCCC-hHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeEEE
Q 025397 29 STVTGAQLLDFAENEASSSLFGLSLP-QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVC 107 (253)
Q Consensus 29 G~Ls~~El~~l~~~~~~~~~~~~~lp-~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~ 107 (253)
..+|+.++..++++-- ++|. -+ ...+..+|..||.| ++|.+ ++.++.++ +.
T Consensus 119 ~~~s~n~lv~~~e~~~--t~f~--~kqi~elkeaF~lfD~d------gdG~i--------Lg~ilrsl----G~------ 170 (644)
T PLN02964 119 NRLSKNTLVGYCELDL--FDFV--TQEPESACESFDLLDPS------SSNKV--------VGSIFVSC----SI------ 170 (644)
T ss_pred CCCCHHHhhhheeecH--hhcc--HHHHHHHHHHHHHHCCC------CCCcC--------HHHHHHHh----CC------
Confidence 5788888888765522 1122 11 24567789999999 78875 33333322 21
Q ss_pred EecChhHHHhhcCchh-HHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCC
Q 025397 108 VLDGNMLKLFLGNEDD-FTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEG 186 (253)
Q Consensus 108 v~dGs~l~~~v~~e~~-f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~ 186 (253)
.++.. -..++..+|+.+|.|++|.|+.+|+..++..++. .+ . ...+.++|+.+|.|+
T Consensus 171 -----------~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~----~~-s------eEEL~eaFk~fDkDg 228 (644)
T PLN02964 171 -----------EDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN----LV-A------ANKKEELFKAADLNG 228 (644)
T ss_pred -----------CCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc----CC-C------HHHHHHHHHHhCCCC
Confidence 11111 1235899999999999999999999999987542 11 1 235889999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhccCCeE
Q 025397 187 EEELGQAQFTELLRQVLQDIVDALADKHII 216 (253)
Q Consensus 187 dg~Vd~eEF~~lmk~iL~~~A~~L~~~PV~ 216 (253)
+|.|+.+||+.+|+...... ..+...||.
T Consensus 229 dG~Is~dEL~~vL~~~~~~~-~~~~~cp~c 257 (644)
T PLN02964 229 DGVVTIDELAALLALQQEQE-PIINNCPVC 257 (644)
T ss_pred CCcCCHHHHHHHHHhcccCc-chhhhchhh
Confidence 99999999999988743221 334555543
No 45
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=97.51 E-value=0.00036 Score=48.91 Aligned_cols=60 Identities=13% Similarity=0.197 Sum_probs=49.1
Q ss_pred cccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHH
Q 025397 19 QPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITA 94 (253)
Q Consensus 19 ~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~ 94 (253)
+.|. +| +++ |.||..|++. +..+ |+|+.....+++.++.+ ++|.|+.++|...++-+..+
T Consensus 3 ~~F~~~D~~~~-G~i~~~el~~~l~~~---------g~~~~~~~~i~~~~d~~------~~g~i~~~ef~~~~~~~~~~ 65 (67)
T cd00052 3 QIFRSLDPDGD-GLISGDEARPFLGKS---------GLPRSVLAQIWDLADTD------KDGKLDKEEFAIAMHLIALA 65 (67)
T ss_pred HHHHHhCCCCC-CcCcHHHHHHHHHHc---------CCCHHHHHHHHHHhcCC------CCCcCCHHHHHHHHHHHHHH
Confidence 4588 99 999 9999999999 5532 24777889999999999 89999999999866665543
No 46
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=97.49 E-value=0.00042 Score=53.25 Aligned_cols=72 Identities=10% Similarity=0.144 Sum_probs=53.5
Q ss_pred hHhhhhcccc-CC--CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHH
Q 025397 13 QLRSLSQPLA-LP--TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (253)
Q Consensus 13 ~l~~l~~~F~-LD--d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l 88 (253)
.|-.+++.|. .+ |+++|+||.+||+. +..... ++..+++..++.+|+.+|.| ++|.|+-++|...+
T Consensus 8 ~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~----lg~k~t~~ev~~m~~~~D~d------~dG~Idf~EFv~lm 77 (88)
T cd05029 8 AIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELT----IGSKLQDAEIAKLMEDLDRN------KDQEVNFQEYVTFL 77 (88)
T ss_pred HHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHh----cCCCCCHHHHHHHHHHhcCC------CCCCCcHHHHHHHH
Confidence 3455668888 77 66349999999999 543111 13335688999999999999 89999999999866
Q ss_pred HHHHHH
Q 025397 89 SDYITA 94 (253)
Q Consensus 89 ~~~l~~ 94 (253)
..+..|
T Consensus 78 ~~l~~~ 83 (88)
T cd05029 78 GALALI 83 (88)
T ss_pred HHHHHH
Confidence 555443
No 47
>PF14658 EF-hand_9: EF-hand domain
Probab=97.47 E-value=0.00026 Score=52.17 Aligned_cols=62 Identities=21% Similarity=0.397 Sum_probs=53.2
Q ss_pred HHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCC-cccCHHHHHHHHHH
Q 025397 130 NLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGE-EELGQAQFTELLRQ 201 (253)
Q Consensus 130 ~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~d-g~Vd~eEF~~lmk~ 201 (253)
.+|..+|.++.|.+....|...|..++.. .| . ++-++++.++.|.++. |.|+.+.|+..|++
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~--~p--~------e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGR--SP--E------ESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCC--CC--c------HHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 47999999999999999999999997731 12 1 3468999999999988 99999999999986
No 48
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=97.46 E-value=0.00038 Score=53.71 Aligned_cols=69 Identities=10% Similarity=0.167 Sum_probs=51.6
Q ss_pred Hhhhhcccc-CC--CCCCc-cccHHHHHH-HHH-ccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHH
Q 025397 14 LRSLSQPLA-LP--TSDSS-TVTGAQLLD-FAE-NEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKL 87 (253)
Q Consensus 14 l~~l~~~F~-LD--d~d~G-~Ls~~El~~-l~~-~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~ 87 (253)
|..++..|. .| |++ | +||..||+. +.. ++- .+....++..++.+++.+|.| ++|.|+-+||...
T Consensus 9 ~~~~~~~F~~~dd~dgd-g~~Is~~EL~~ll~~~~~~---~~~~~~~~~~v~~i~~elD~n------~dG~Idf~EF~~l 78 (93)
T cd05026 9 MDTLIRIFHNYSGKEGD-RYKLSKGELKELLQRELTD---FLSSQKDPMLVDKIMNDLDSN------KDNEVDFNEFVVL 78 (93)
T ss_pred HHHHHHHHHHHHccCCC-CCEECHHHHHHHHHHHhHH---hcccccCHHHHHHHHHHhCCC------CCCCCCHHHHHHH
Confidence 455667899 77 677 7 699999999 544 221 001112577899999999999 8999999999997
Q ss_pred HHHHH
Q 025397 88 ASDYI 92 (253)
Q Consensus 88 l~~~l 92 (253)
+..++
T Consensus 79 ~~~l~ 83 (93)
T cd05026 79 VAALT 83 (93)
T ss_pred HHHHH
Confidence 76664
No 49
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.46 E-value=0.00053 Score=61.19 Aligned_cols=66 Identities=20% Similarity=0.375 Sum_probs=47.6
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHH
Q 025397 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 202 (253)
Q Consensus 127 ~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~i 202 (253)
.+...|...|+|++|.|+-+||+.||...+ -.|.+ ...+.-++..+|.+..|.|+.+||+++-+-|
T Consensus 58 ~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~----~~~Fs------~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i 123 (221)
T KOG0037|consen 58 QLAGWFQSVDRDRSGRILAKELQQALSNGT----WSPFS------IETCRLMISMFDRDNSGTIGFKEFKALWKYI 123 (221)
T ss_pred HHHHHHHhhCccccccccHHHHHHHhhcCC----CCCCC------HHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Confidence 499999999999999999999999998533 12233 2345566666666666666666666666544
No 50
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.44 E-value=0.00013 Score=45.14 Aligned_cols=29 Identities=21% Similarity=0.379 Sum_probs=25.3
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHh-ccC
Q 025397 128 AENLFADLDTEDEGKVCKGEIQNALG-HMG 156 (253)
Q Consensus 128 v~~~F~~lD~D~dG~LS~~ELr~aL~-~l~ 156 (253)
+..+|+.+|.|++|+|+.+|++.+|. .+|
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 67899999999999999999999998 454
No 51
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.41 E-value=9.1e-05 Score=59.59 Aligned_cols=105 Identities=9% Similarity=0.139 Sum_probs=62.1
Q ss_pred CHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCccc
Q 025397 80 DRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEF 159 (253)
Q Consensus 80 ~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~ 159 (253)
.+.+|-.-|.+.+..+...+...+..-.--.-................+.=.|.+||.|+||.|++.||++....+
T Consensus 8 e~~~F~~RL~dWf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l---- 83 (113)
T PF10591_consen 8 ELSQFPRRLLDWFKNLMEQSKSRDELSDHYIELLKRDESSSYSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL---- 83 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCSS-HHHHHHHHHHTGGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT----
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH----
Confidence 3566766666666665544433211110000001122234455567788889999999999999999999765543
Q ss_pred CCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHH
Q 025397 160 GVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTE 197 (253)
Q Consensus 160 GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~ 197 (253)
+|| .+=+...|+.+|.|+||.||..|+..
T Consensus 84 -~~~--------e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 84 -MPP--------EHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp -STT--------GGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred -hhh--------HHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 221 23567889999999999999999864
No 52
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.34 E-value=0.0013 Score=63.42 Aligned_cols=62 Identities=16% Similarity=0.278 Sum_probs=52.3
Q ss_pred hcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHH
Q 025397 118 LGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTE 197 (253)
Q Consensus 118 v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~ 197 (253)
++.-..|...+..+|+.+|.|+||.|+++|+.. .+.+|+.+|.|+||.|+++||..
T Consensus 326 ~~~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~------------------------~~~~F~~~D~d~DG~Is~eEf~~ 381 (391)
T PRK12309 326 LEGGEAFTHAAQEIFRLYDLDGDGFITREEWLG------------------------SDAVFDALDLNHDGKITPEEMRA 381 (391)
T ss_pred hhccChhhHHHHHHHHHhCCCCCCcCcHHHHHH------------------------HHHHHHHhCCCCCCCCcHHHHHH
Confidence 444456888899999999999999999999841 13579999999999999999999
Q ss_pred HHHHHH
Q 025397 198 LLRQVL 203 (253)
Q Consensus 198 lmk~iL 203 (253)
.++...
T Consensus 382 ~~~~~~ 387 (391)
T PRK12309 382 GLGAAL 387 (391)
T ss_pred HHHHHH
Confidence 988654
No 53
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.33 E-value=0.00022 Score=42.56 Aligned_cols=25 Identities=28% Similarity=0.541 Sum_probs=22.1
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHH
Q 025397 128 AENLFADLDTEDEGKVCKGEIQNAL 152 (253)
Q Consensus 128 v~~~F~~lD~D~dG~LS~~ELr~aL 152 (253)
+.++|+.+|.|+||+||.+|++..+
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4679999999999999999999753
No 54
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.27 E-value=0.00047 Score=55.87 Aligned_cols=55 Identities=9% Similarity=0.010 Sum_probs=46.3
Q ss_pred hhcccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHH
Q 025397 17 LSQPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (253)
Q Consensus 17 l~~~F~-LD-d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l 88 (253)
+.-.|. +| |+| |.||++||.++. ++.+.+.+..+|+.+|.| ++|.||.+||..-+
T Consensus 50 l~w~F~~lD~d~D-G~Ls~~EL~~~~----------l~~~e~~~~~f~~~~D~n------~Dg~IS~~Ef~~cl 106 (116)
T cd00252 50 VGWMFNQLDGNYD-GKLSHHELAPIR----------LDPNEHCIKPFFESCDLD------KDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHCCCCC-CcCCHHHHHHHH----------ccchHHHHHHHHHHHCCC------CCCCCCHHHHHHHH
Confidence 346799 99 999 999999999943 113477889999999999 99999999998855
No 55
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=97.26 E-value=0.00093 Score=50.96 Aligned_cols=69 Identities=12% Similarity=0.125 Sum_probs=52.4
Q ss_pred hhhhcccc-CC--CCCCc-cccHHHHHH-HHH-ccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHH
Q 025397 15 RSLSQPLA-LP--TSDSS-TVTGAQLLD-FAE-NEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (253)
Q Consensus 15 ~~l~~~F~-LD--d~d~G-~Ls~~El~~-l~~-~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l 88 (253)
..+.+.|. +| +++ | .||..||+. +.. +|. .++...++..++.+|+.+|.+ ++|.|+-++|...+
T Consensus 9 ~~l~~~F~~fDd~dg~-G~~Is~~El~~~l~~~lg~---~~~~~~s~~~v~~i~~~~D~d------~~G~I~f~eF~~l~ 78 (92)
T cd05025 9 ETLINVFHAHSGKEGD-KYKLSKKELKDLLQTELSD---FLDAQKDADAVDKIMKELDEN------GDGEVDFQEFVVLV 78 (92)
T ss_pred HHHHHHHHHHhcccCC-CCeECHHHHHHHHHHHHHH---HccCCCCHHHHHHHHHHHCCC------CCCcCcHHHHHHHH
Confidence 44558899 94 788 9 599999999 543 554 113234578899999999999 89999999999866
Q ss_pred HHHHH
Q 025397 89 SDYIT 93 (253)
Q Consensus 89 ~~~l~ 93 (253)
..+..
T Consensus 79 ~~~~~ 83 (92)
T cd05025 79 AALTV 83 (92)
T ss_pred HHHHH
Confidence 65543
No 56
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=97.26 E-value=0.001 Score=51.07 Aligned_cols=73 Identities=14% Similarity=0.154 Sum_probs=52.4
Q ss_pred hHhhhhcccc-CC--CCCCc-cccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHH
Q 025397 13 QLRSLSQPLA-LP--TSDSS-TVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (253)
Q Consensus 13 ~l~~l~~~F~-LD--d~d~G-~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l 88 (253)
-|..+++.|. +| +++ | .|+..||+.+....... ..+...++..++.+++.+|.| ++|.|+-++|...+
T Consensus 6 ~~~~l~~aF~~fD~~dgd-G~~I~~~eL~~ll~~~~~~-~lg~~~~~~~v~~~i~~~D~n------~dG~v~f~eF~~li 77 (88)
T cd05027 6 AMVALIDVFHQYSGREGD-KHKLKKSELKELINNELSH-FLEEIKEQEVVDKVMETLDSD------GDGECDFQEFMAFV 77 (88)
T ss_pred HHHHHHHHHHHhcccCCC-cCEECHHHHHHHHHHHhHH-HhcCCCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHH
Confidence 3556678899 86 788 9 69999999944331100 012223467799999999999 89999999998866
Q ss_pred HHHHH
Q 025397 89 SDYIT 93 (253)
Q Consensus 89 ~~~l~ 93 (253)
..++.
T Consensus 78 ~~~~~ 82 (88)
T cd05027 78 AMVTT 82 (88)
T ss_pred HHHHH
Confidence 65544
No 57
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.25 E-value=0.0012 Score=52.44 Aligned_cols=73 Identities=15% Similarity=0.264 Sum_probs=58.2
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHHHH
Q 025397 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIV 207 (253)
Q Consensus 128 v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~~A 207 (253)
-.++|..+|. ++|.||-+..+.+|.+ .|+| ......|..-.|.|+||.++.+||+-.|+=|-..+.
T Consensus 12 y~~~F~~l~~-~~g~isg~~a~~~f~~----S~L~---------~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~~~~~ 77 (104)
T PF12763_consen 12 YDQIFQSLDP-QDGKISGDQAREFFMK----SGLP---------RDVLAQIWNLADIDNDGKLDFEEFAIAMHLINRKLN 77 (104)
T ss_dssp HHHHHHCTSS-STTEEEHHHHHHHHHH----TTSS---------HHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC-CCCeEeHHHHHHHHHH----cCCC---------HHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHHHHhc
Confidence 5789999995 5899999999999988 5676 357888999999999999999999999988876665
Q ss_pred HHhccCC
Q 025397 208 DALADKH 214 (253)
Q Consensus 208 ~~L~~~P 214 (253)
..+..-|
T Consensus 78 ~~~~~lP 84 (104)
T PF12763_consen 78 GNGKPLP 84 (104)
T ss_dssp HTTS---
T ss_pred CCCCCCc
Confidence 5443433
No 58
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=97.23 E-value=0.0011 Score=51.20 Aligned_cols=69 Identities=9% Similarity=0.144 Sum_probs=54.0
Q ss_pred Hhhhhcccc-CC--CCCCccccHHHHHH-HHH-ccccccccCCCCCh-HHHHHHHHhhcCCCCcccccccccCHHHHHHH
Q 025397 14 LRSLSQPLA-LP--TSDSSTVTGAQLLD-FAE-NEASSSLFGLSLPQ-NLKSTALKHISGSDDDVTFRIKEFDRDHASKL 87 (253)
Q Consensus 14 l~~l~~~F~-LD--d~d~G~Ls~~El~~-l~~-~~~~~~~~~~~lp~-~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~ 87 (253)
|..++..|. .| +++ |+||.+||+. +.. ++. - +.+ ..++.+|+.+|.| ++|.|+-+||...
T Consensus 7 i~~l~~~F~~fd~~~~~-g~i~~~ELk~ll~~elg~-----~--ls~~~~v~~mi~~~D~d------~DG~I~F~EF~~l 72 (89)
T cd05022 7 IETLVSNFHKASVKGGK-ESLTASEFQELLTQQLPH-----L--LKDVEGLEEKMKNLDVN------QDSKLSFEEFWEL 72 (89)
T ss_pred HHHHHHHHHHHhCCCCC-CeECHHHHHHHHHHHhhh-----h--ccCHHHHHHHHHHhCCC------CCCCCcHHHHHHH
Confidence 455667888 88 466 9999999999 555 454 2 345 7899999999999 9999999999996
Q ss_pred HHHHHHHHH
Q 025397 88 ASDYITAIA 96 (253)
Q Consensus 88 l~~~l~~iA 96 (253)
+..+..+..
T Consensus 73 ~~~l~~~~~ 81 (89)
T cd05022 73 IGELAKAVK 81 (89)
T ss_pred HHHHHHHHH
Confidence 666655443
No 59
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=97.22 E-value=0.0012 Score=56.71 Aligned_cols=67 Identities=21% Similarity=0.327 Sum_probs=55.2
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHH
Q 025397 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 204 (253)
Q Consensus 127 ~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~ 204 (253)
.+..+|..+|.+++|+|..+||+.|+..+|-+ |. ...+..++.++|.++.|.|++++|+..|...++
T Consensus 34 ~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE----~~-------k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~ 100 (172)
T KOG0028|consen 34 EIKEAFELFDPDMAGKIDVEELKVAMRALGFE----PK-------KEEILKLLADVDKEGSGKITFEDFRRVMTVKLG 100 (172)
T ss_pred hHHHHHHhhccCCCCcccHHHHHHHHHHcCCC----cc-------hHHHHHHHHhhhhccCceechHHHHHHHHHHHh
Confidence 48899999999999999999999999987743 11 235778889999999999999999988876554
No 60
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=97.21 E-value=0.0018 Score=62.74 Aligned_cols=76 Identities=14% Similarity=0.329 Sum_probs=60.5
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHH
Q 025397 125 TMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 204 (253)
Q Consensus 125 ~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~ 204 (253)
+.-+...|++||.+++|.+...+|.++|..+. .| .. ...+...+|+..|.|.||.||++||+..+..-=+
T Consensus 13 ~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~----~~-~~-----~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E~ 82 (463)
T KOG0036|consen 13 DIRIRCLFKELDSKNDGQVDLDQLEKGLEKLD----HP-KP-----NYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKEL 82 (463)
T ss_pred HHHHHHHHHHhccCCCCceeHHHHHHHHHhcC----CC-CC-----chHHHHHHHHhcccCcCCcccHHHHHHHHHHhHH
Confidence 45588999999999999999999999999855 33 11 1336678899999999999999999998886544
Q ss_pred HHHHHh
Q 025397 205 DIVDAL 210 (253)
Q Consensus 205 ~~A~~L 210 (253)
.+++..
T Consensus 83 ~l~~~F 88 (463)
T KOG0036|consen 83 ELYRIF 88 (463)
T ss_pred HHHHHH
Confidence 444433
No 61
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=97.19 E-value=0.0025 Score=55.71 Aligned_cols=97 Identities=11% Similarity=0.180 Sum_probs=71.0
Q ss_pred CCCCcc-ccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCC
Q 025397 25 TSDSST-VTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDD 102 (253)
Q Consensus 25 d~d~G~-Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~ 102 (253)
+++ |. ++..+... +....+ ...+..-..-+|+-+|.+ ++|.|+++++.+.++.++. .-..
T Consensus 78 ~~~-~~~v~F~~Fv~~ls~f~~------~~~~~~Kl~faF~vYD~~------~~G~I~reel~~iv~~~~~----~~~~- 139 (187)
T KOG0034|consen 78 DGN-GDPVDFEEFVRLLSVFSP------KASKREKLRFAFRVYDLD------GDGFISREELKQILRMMVG----ENDD- 139 (187)
T ss_pred cCC-CCccCHHHHHHHHhhhcC------CccHHHHHHHHHHHhcCC------CCCcCcHHHHHHHHHHHHc----cCCc-
Confidence 444 44 99999998 443333 112244677799999999 9999999999995554432 1111
Q ss_pred CeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhcc
Q 025397 103 PLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHM 155 (253)
Q Consensus 103 Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l 155 (253)
. .+..-+..++.+|.+.|.|+||+||.+|.+.++.+.
T Consensus 140 -------------~---~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 140 -------------M---SDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred -------------c---hHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 1 233477889999999999999999999999999884
No 62
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.12 E-value=0.0014 Score=44.76 Aligned_cols=49 Identities=6% Similarity=0.047 Sum_probs=41.9
Q ss_pred ccccHHHHHH-HHHccccccccCCC-CChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHH
Q 025397 29 STVTGAQLLD-FAENEASSSLFGLS-LPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASD 90 (253)
Q Consensus 29 G~Ls~~El~~-l~~~~~~~~~~~~~-lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~ 90 (253)
|.||.++|+. +..+|. . +++..++.+|..+|.+ ++|.|+.+||...++.
T Consensus 3 G~i~~~~~~~~l~~~g~-------~~~s~~e~~~l~~~~D~~------~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 3 GKITREEFRRALSKLGI-------KDLSEEEVDRLFREFDTD------GDGYISFDEFISMMQR 53 (54)
T ss_dssp SEEEHHHHHHHHHHTTS-------SSSCHHHHHHHHHHHTTS------SSSSEEHHHHHHHHHH
T ss_pred CEECHHHHHHHHHHhCC-------CCCCHHHHHHHHHhcccC------CCCCCCHHHHHHHHHh
Confidence 9999999999 644444 3 6788899999999999 9999999999986653
No 63
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.10 E-value=0.0018 Score=49.70 Aligned_cols=70 Identities=11% Similarity=0.106 Sum_probs=52.1
Q ss_pred hhhhcccc-CC--CC-CCccccHHHHHH-HHH-ccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHH
Q 025397 15 RSLSQPLA-LP--TS-DSSTVTGAQLLD-FAE-NEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (253)
Q Consensus 15 ~~l~~~F~-LD--d~-d~G~Ls~~El~~-l~~-~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l 88 (253)
..+...|. +| ++ + |.||..||+. +.. .+. .++...++..++.+++.+|.+ ++|.|+.++|...+
T Consensus 8 ~~l~~~F~~~D~~dg~d-G~Is~~El~~~l~~~~g~---~lg~~~s~~ei~~~~~~~D~~------~dg~I~f~eF~~l~ 77 (94)
T cd05031 8 ESLILTFHRYAGKDGDK-NTLSRKELKKLMEKELSE---FLKNQKDPMAVDKIMKDLDQN------RDGKVNFEEFVSLV 77 (94)
T ss_pred HHHHHHHHHHhccCCCC-CeECHHHHHHHHHHHhHH---HhhccccHHHHHHHHHHhCCC------CCCcCcHHHHHHHH
Confidence 34457798 87 54 6 9999999999 543 322 113345678899999999999 89999999999866
Q ss_pred HHHHHH
Q 025397 89 SDYITA 94 (253)
Q Consensus 89 ~~~l~~ 94 (253)
..+-.+
T Consensus 78 ~~~~~~ 83 (94)
T cd05031 78 AGLSIA 83 (94)
T ss_pred HHHHHH
Confidence 655443
No 64
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=97.07 E-value=0.0024 Score=62.22 Aligned_cols=53 Identities=9% Similarity=0.069 Sum_probs=38.6
Q ss_pred CCCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHH
Q 025397 25 TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYI 92 (253)
Q Consensus 25 d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l 92 (253)
+.+ |-||++|-.=|.-+ +. .|..-..=+|+-||.| +||.|+++||..+.+-++
T Consensus 211 g~~-GLIsfSdYiFLlTl------LS--~p~~~F~IAFKMFD~d------gnG~IdkeEF~~v~~li~ 263 (489)
T KOG2643|consen 211 GES-GLISFSDYIFLLTL------LS--IPERNFRIAFKMFDLD------GNGEIDKEEFETVQQLIR 263 (489)
T ss_pred CCC-CeeeHHHHHHHHHH------Hc--cCcccceeeeeeeecC------CCCcccHHHHHHHHHHHH
Confidence 446 99999998773322 22 4554455579999999 999999999988665444
No 65
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.03 E-value=0.00071 Score=55.38 Aligned_cols=69 Identities=17% Similarity=0.229 Sum_probs=53.8
Q ss_pred HHHHhhhCCCCCCcccHHHHHHHHhccCc--ccCC-C-CCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHH
Q 025397 129 ENLFADLDTEDEGKVCKGEIQNALGHMGV--EFGV-P-PFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTEL 198 (253)
Q Consensus 129 ~~~F~~lD~D~dG~LS~~ELr~aL~~l~v--~~Gl-P-p~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~l 198 (253)
-.-|++.|-|++|+|.-=||-+|+-..-. +.|- | |.++-.+ ...+++.|++.-|.|+||-|+|.||.+-
T Consensus 70 fHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~E-le~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 70 FHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAE-LERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHH-HHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 46799999999999999999999977554 3454 3 3333333 3566899999999999999999999874
No 66
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.03 E-value=0.0025 Score=49.08 Aligned_cols=71 Identities=14% Similarity=0.110 Sum_probs=51.0
Q ss_pred hHhhhhcccc--CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHH
Q 025397 13 QLRSLSQPLA--LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (253)
Q Consensus 13 ~l~~l~~~F~--LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l 88 (253)
.|..++..|. .| ++++++||.+||+. +..... .+.+-...+..++.+|+.+|.| ++|.|+-+||...+
T Consensus 7 ~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~--~~~~~~~~~~~~~~ll~~~D~d------~DG~I~f~EF~~l~ 78 (89)
T cd05023 7 CIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELA--SFTKNQKDPGVLDRMMKKLDLN------SDGQLDFQEFLNLI 78 (89)
T ss_pred HHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhh--HhhcCCCCHHHHHHHHHHcCCC------CCCcCcHHHHHHHH
Confidence 4566678888 44 67745999999999 443322 0112223467899999999999 99999999999855
Q ss_pred HHH
Q 025397 89 SDY 91 (253)
Q Consensus 89 ~~~ 91 (253)
..+
T Consensus 79 ~~l 81 (89)
T cd05023 79 GGL 81 (89)
T ss_pred HHH
Confidence 544
No 67
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.01 E-value=0.0017 Score=49.62 Aligned_cols=71 Identities=4% Similarity=0.023 Sum_probs=51.3
Q ss_pred hHhhhhcccc-CC--CCCCccccHHHHHH-HHHc-cccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHH
Q 025397 13 QLRSLSQPLA-LP--TSDSSTVTGAQLLD-FAEN-EASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKL 87 (253)
Q Consensus 13 ~l~~l~~~F~-LD--d~d~G~Ls~~El~~-l~~~-~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~ 87 (253)
.|..++..|. .+ ++++|+||..||+. +... +-. .....++..++.+|+.+|.+ ++|.|+-++|...
T Consensus 6 ~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~---~t~~~~~~~v~~i~~~~D~d------~dG~I~f~eF~~~ 76 (88)
T cd05030 6 AIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNF---LKKEKNQKAIDKIFEDLDTN------QDGQLSFEEFLVL 76 (88)
T ss_pred HHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHh---hccCCCHHHHHHHHHHcCCC------CCCcCcHHHHHHH
Confidence 3556667788 66 33459999999999 5422 220 00113378899999999999 8999999999997
Q ss_pred HHHHH
Q 025397 88 ASDYI 92 (253)
Q Consensus 88 l~~~l 92 (253)
+..++
T Consensus 77 ~~~~~ 81 (88)
T cd05030 77 VIKVG 81 (88)
T ss_pred HHHHH
Confidence 77664
No 68
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.98 E-value=0.00074 Score=40.27 Aligned_cols=24 Identities=17% Similarity=0.531 Sum_probs=21.8
Q ss_pred HHHHHHhccCCCcccCHHHHHHHH
Q 025397 176 NDILKKHGAEGEEELGQAQFTELL 199 (253)
Q Consensus 176 ~~if~e~D~d~dg~Vd~eEF~~lm 199 (253)
..+|+.+|.|+||.||.+||.+++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHHC
Confidence 568999999999999999999864
No 69
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=96.92 E-value=0.002 Score=42.71 Aligned_cols=56 Identities=11% Similarity=0.186 Sum_probs=46.1
Q ss_pred cccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHH
Q 025397 19 QPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (253)
Q Consensus 19 ~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l 88 (253)
..|. +| +++ |.|+..|++. +..++. +.|...+..+++.++.+ ++|.|+.++|...+
T Consensus 4 ~~f~~~d~~~~-g~l~~~e~~~~l~~~~~-------~~~~~~~~~~~~~~~~~------~~~~l~~~ef~~~~ 62 (63)
T cd00051 4 EAFRLFDKDGD-GTISADELKAALKSLGE-------GLSEEEIDEMIREVDKD------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHhCCCCC-CcCcHHHHHHHHHHhCC-------CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHh
Confidence 4578 89 888 9999999999 655443 35678899999999999 89999999997643
No 70
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=96.85 E-value=0.0021 Score=54.94 Aligned_cols=72 Identities=18% Similarity=0.295 Sum_probs=51.9
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHhccCccc-----------CCCCC--------------CCCCCCchHHHHHHHHH
Q 025397 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEF-----------GVPPF--------------SECRSTEFPQLNDILKK 181 (253)
Q Consensus 127 ~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~-----------GlPp~--------------~~~~~~~~~~~~~if~e 181 (253)
+...+|..+|.|+||.|.++.|+..|.++|... +-+|. ++.|+ .++-+.|+.
T Consensus 33 EfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea~gPINft~FLTmfGekL~gtdpe---~~I~~AF~~ 109 (171)
T KOG0031|consen 33 EFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEAPGPINFTVFLTMFGEKLNGTDPE---EVILNAFKT 109 (171)
T ss_pred HHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhCCCCeeHHHHHHHHHHHhcCCCHH---HHHHHHHHh
Confidence 367899999999999999999999999988521 11111 22233 246667788
Q ss_pred hccCCCcccCHHHHHHHHHH
Q 025397 182 HGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 182 ~D~d~dg~Vd~eEF~~lmk~ 201 (253)
||.++.|.|..+.+++++..
T Consensus 110 FD~~~~G~I~~d~lre~Ltt 129 (171)
T KOG0031|consen 110 FDDEGSGKIDEDYLRELLTT 129 (171)
T ss_pred cCccCCCccCHHHHHHHHHH
Confidence 88888888887777766654
No 71
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=96.66 E-value=0.0048 Score=46.32 Aligned_cols=69 Identities=7% Similarity=0.086 Sum_probs=51.1
Q ss_pred hHhhhhcccc-CCC---CCCccccHHHHHH-HHH-ccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHH
Q 025397 13 QLRSLSQPLA-LPT---SDSSTVTGAQLLD-FAE-NEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASK 86 (253)
Q Consensus 13 ~l~~l~~~F~-LDd---~d~G~Ls~~El~~-l~~-~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~ 86 (253)
++..+...|. +|. ++ |.||..|++. +.. ++. .++.+.....++.+++.++.+ ++|.|+.++|..
T Consensus 6 ~~~~l~~~F~~~D~~~~~~-G~Is~~el~~~l~~~~g~---~~~~~~~~~ei~~i~~~~d~~------~~g~I~f~eF~~ 75 (88)
T cd00213 6 AIETIIDVFHKYSGKEGDK-DTLSKKELKELLETELPN---FLKNQKDPEAVDKIMKDLDVN------KDGKVDFQEFLV 75 (88)
T ss_pred HHHHHHHHHHHHhhccCCC-CcCcHHHHHHHHHHHhhh---hccCCCCHHHHHHHHHHhccC------CCCcCcHHHHHH
Confidence 5667777899 884 66 9999999999 443 332 011122367899999999999 899999999988
Q ss_pred HHHHH
Q 025397 87 LASDY 91 (253)
Q Consensus 87 ~l~~~ 91 (253)
.+...
T Consensus 76 ~~~~~ 80 (88)
T cd00213 76 LIGKL 80 (88)
T ss_pred HHHHH
Confidence 55544
No 72
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=96.49 E-value=0.011 Score=58.08 Aligned_cols=146 Identities=15% Similarity=0.136 Sum_probs=99.2
Q ss_pred cccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHH
Q 025397 19 QPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIA 96 (253)
Q Consensus 19 ~~F~-LD-d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA 96 (253)
-.|- || ++| |.|++++|...+ ..-+..-+++.||.+...+ - ....+|.+|=+.|.- .++|+
T Consensus 282 ~kFweLD~Dhd-~lidk~~L~ry~---------d~tlt~~ivdRIFs~v~r~-~-~~~~eGrmdykdFv~----FilA~- 344 (493)
T KOG2562|consen 282 CKFWELDTDHD-GLIDKEDLKRYG---------DHTLTERIVDRIFSQVPRG-F-TVKVEGRMDYKDFVD----FILAE- 344 (493)
T ss_pred HHHhhhccccc-cccCHHHHHHHh---------ccchhhHHHHHHHhhcccc-c-eeeecCcccHHHHHH----HHHHh-
Confidence 4477 99 999 999999998844 2223467899999954444 1 112588899666654 33332
Q ss_pred hHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccC---cccCCCCCCCCCCCchH
Q 025397 97 DELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMG---VEFGVPPFSECRSTEFP 173 (253)
Q Consensus 97 ~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~---v~~GlPp~~~~~~~~~~ 173 (253)
.=++ =...++=.|+-+|.+++|.|+..||+-+.+... ..+|..|.. -..
T Consensus 345 -e~k~----------------------t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~-----fed 396 (493)
T KOG2562|consen 345 -EDKD----------------------TPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALP-----FED 396 (493)
T ss_pred -ccCC----------------------CccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCccc-----HHH
Confidence 2233 223488899999999999999999998776532 133433332 123
Q ss_pred HHHHHHHHhccCCCcccCHHHHHHHHHHHHHHHHHHhc
Q 025397 174 QLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALA 211 (253)
Q Consensus 174 ~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~~A~~L~ 211 (253)
+..+++.++..-..+.|+.+.|+. .+.-..|++.|=
T Consensus 397 ~l~qi~DMvkP~~~~kItLqDlk~--skl~~~v~n~l~ 432 (493)
T KOG2562|consen 397 ALCQIRDMVKPEDENKITLQDLKG--SKLAGTVFNILF 432 (493)
T ss_pred HHHHHHHHhCccCCCceeHHHHhh--ccccchhhhhhc
Confidence 567888888877899999999997 555555555553
No 73
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.42 E-value=0.011 Score=47.10 Aligned_cols=76 Identities=14% Similarity=0.169 Sum_probs=59.6
Q ss_pred hhHhhhhcccc-CCCCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHH
Q 025397 12 TQLRSLSQPLA-LPTSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLAS 89 (253)
Q Consensus 12 ~~l~~l~~~F~-LDd~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~ 89 (253)
.+...+.+.|. ++..+ |.||+.+.++ |..+ +||...+..|..-.|.+ ++|.++++||.-.|+
T Consensus 7 ~e~~~y~~~F~~l~~~~-g~isg~~a~~~f~~S---------~L~~~~L~~IW~LaD~~------~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 7 EEKQKYDQIFQSLDPQD-GKISGDQAREFFMKS---------GLPRDVLAQIWNLADID------NDGKLDFEEFAIAMH 70 (104)
T ss_dssp CHHHHHHHHHHCTSSST-TEEEHHHHHHHHHHT---------TSSHHHHHHHHHHH-SS------SSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCC-CeEeHHHHHHHHHHc---------CCCHHHHHHHHhhhcCC------CCCcCCHHHHHHHHH
Confidence 45667778999 99778 9999999999 6643 36899999999999999 999999999999888
Q ss_pred HHHHHHHhHhCCCC
Q 025397 90 DYITAIADELKDDP 103 (253)
Q Consensus 90 ~~l~~iA~~L~~~P 103 (253)
-+-..++..+..-|
T Consensus 71 Li~~~~~~~~~~lP 84 (104)
T PF12763_consen 71 LINRKLNGNGKPLP 84 (104)
T ss_dssp HHHHHHHHTTS---
T ss_pred HHHHHhcCCCCCCc
Confidence 77666655444433
No 74
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=96.40 E-value=0.0033 Score=38.69 Aligned_cols=27 Identities=19% Similarity=0.417 Sum_probs=24.2
Q ss_pred HHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 175 LNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 175 ~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
|..+|+.+|.|++|.|+.+||+..|++
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 568999999999999999999999985
No 75
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.39 E-value=0.0086 Score=42.01 Aligned_cols=50 Identities=16% Similarity=0.309 Sum_probs=38.9
Q ss_pred cccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHH
Q 025397 142 KVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 202 (253)
Q Consensus 142 ~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~i 202 (253)
++|-.|++..|..+.+++ .+.....+|+++|+.++|.++.+||.+..+..
T Consensus 1 kmsf~Evk~lLk~~NI~~-----------~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEM-----------DDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp EBEHHHHHHHHHHTT---------------HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCc-----------CHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 468899999999998764 24455789999999999999999999988753
No 76
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=96.20 E-value=0.018 Score=44.96 Aligned_cols=73 Identities=11% Similarity=0.124 Sum_probs=51.2
Q ss_pred Hhhhhcccc-CCCCCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHH
Q 025397 14 LRSLSQPLA-LPTSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYI 92 (253)
Q Consensus 14 l~~l~~~F~-LDd~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l 92 (253)
|..++..|. .- +++++||+.||+.|.+..-.. .+.-.--+..++.+|+.+|.| ++|+|+-+||...+-.+.
T Consensus 7 i~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~-~l~~~~d~~~vd~im~~LD~n------~Dg~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 7 MEKMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSE-FLKNQNDPMAVDKIMKDLDDC------RDGKVGFQSFFSLIAGLL 78 (91)
T ss_pred HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHH-HHcCCCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHHHH
Confidence 445566777 65 455899999999955433210 111111267899999999999 999999999998776665
Q ss_pred HH
Q 025397 93 TA 94 (253)
Q Consensus 93 ~~ 94 (253)
.|
T Consensus 79 ~a 80 (91)
T cd05024 79 IA 80 (91)
T ss_pred HH
Confidence 44
No 77
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=95.74 E-value=0.01 Score=54.51 Aligned_cols=149 Identities=15% Similarity=0.152 Sum_probs=90.3
Q ss_pred hhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHH--
Q 025397 17 LSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDY-- 91 (253)
Q Consensus 17 l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~-- 91 (253)
+..+|+ .| |.| |+||-.||+. +.+-.+ -||.- ..+.-..-|...|.| ++|.|+-+||+-.+...
T Consensus 103 lmviFsKvDVNtD-rkisAkEmqrwImekta--EHfqe--ameeSkthFraVDpd------gDGhvsWdEykvkFlaskg 171 (362)
T KOG4251|consen 103 LMVIFSKVDVNTD-RKISAKEMQRWIMEKTA--EHFQE--AMEESKTHFRAVDPD------GDGHVSWDEYKVKFLASKG 171 (362)
T ss_pred HHHHHhhcccCcc-ccccHHHHHHHHHHHHH--HHHHH--HHhhhhhheeeeCCC------CCCceehhhhhhHHHhhcC
Confidence 337899 99 888 9999999999 776655 23321 112223345666777 89999999997755321
Q ss_pred ----HHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCC-CCcccHHHHHHHHhccCcccCCCCCCC
Q 025397 92 ----ITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTED-EGKVCKGEIQNALGHMGVEFGVPPFSE 166 (253)
Q Consensus 92 ----l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~-dG~LS~~ELr~aL~~l~v~~GlPp~~~ 166 (253)
-.++|-.|.+ |.-| =+..+.|..-+...+-+.|... +=.|+..|...+|-- + .+
T Consensus 172 hsekevadairlne-elkV-----------DeEtqevlenlkdRwyqaDsppadlllteeEflsFLHP---E-----hS- 230 (362)
T KOG4251|consen 172 HSEKEVADAIRLNE-ELKV-----------DEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHP---E-----HS- 230 (362)
T ss_pred cchHHHHHHhhccC-cccc-----------cHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcCh---H-----hh-
Confidence 1144445544 1111 1222334444556666666643 223455666655421 1 11
Q ss_pred CCCCchHHHHHHHHHhccCCCcccCHHHHHHH
Q 025397 167 CRSTEFPQLNDILKKHGAEGEEELGQAQFTEL 198 (253)
Q Consensus 167 ~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~l 198 (253)
..++-.++++|+..+|.|+|..+|+.||..+
T Consensus 231 -rgmLrfmVkeivrdlDqdgDkqlSvpeFisl 261 (362)
T KOG4251|consen 231 -RGMLRFMVKEIVRDLDQDGDKQLSVPEFISL 261 (362)
T ss_pred -hhhHHHHHHHHHHHhccCCCeeecchhhhcC
Confidence 1112345688888899999999999999854
No 78
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=95.74 E-value=0.026 Score=56.32 Aligned_cols=70 Identities=17% Similarity=0.309 Sum_probs=55.9
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHH
Q 025397 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQD 205 (253)
Q Consensus 127 ~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~ 205 (253)
.+.+.|..+| |++|+++..+|.++|.+.+.-.|-- ....+.+++.+.+.|.+|.|+.|||...+..+.-.
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~--------~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~s~ 89 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYF--------VREEIKEILGEVGVDADGRVEFEEFVGIFLNLKSK 89 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccch--------hHHHHHHHHhccCCCcCCccCHHHHHHHHHhhhhh
Confidence 4789999999 8999999999999999965422211 12356788999999999999999999977766544
No 79
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.24 E-value=0.024 Score=31.74 Aligned_cols=27 Identities=19% Similarity=0.539 Sum_probs=24.3
Q ss_pred HHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 175 LNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 175 ~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
+..+|+.+|.+++|.|++.+|...++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 457899999999999999999999875
No 80
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=95.01 E-value=0.12 Score=57.21 Aligned_cols=107 Identities=16% Similarity=0.205 Sum_probs=81.1
Q ss_pred hhhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHH
Q 025397 11 GTQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKL 87 (253)
Q Consensus 11 G~~l~~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~ 87 (253)
-.++++|--.|. .| +.. |.|++.+++- |-.+|.---...-|-|++-+..+|.-.|.+ +.|.|+
T Consensus 2249 Ee~L~EFs~~fkhFDkek~-G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~------r~G~Vs------- 2314 (2399)
T KOG0040|consen 2249 EEQLKEFSMMFKHFDKEKN-GRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPN------RDGYVS------- 2314 (2399)
T ss_pred HHHHHHHHHHHHHhchhhc-cCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCC------CcCccc-------
Confidence 467888888899 99 888 9999999999 888877110112245677999999999999 999999
Q ss_pred HHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHH
Q 025397 88 ASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNA 151 (253)
Q Consensus 88 l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~a 151 (253)
+++||.+|...=.. ....++. ++.+|+.+|. +..++++.++...
T Consensus 2315 l~dY~afmi~~ETe--------------NI~s~~e-----IE~AfraL~a-~~~yvtke~~~~~ 2358 (2399)
T KOG0040|consen 2315 LQDYMAFMISKETE--------------NILSSEE-----IEDAFRALDA-GKPYVTKEELYQN 2358 (2399)
T ss_pred HHHHHHHHHhcccc--------------cccchHH-----HHHHHHHhhc-CCccccHHHHHhc
Confidence 55677777654322 3344455 9999999999 5678999998644
No 81
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=94.89 E-value=0.064 Score=51.91 Aligned_cols=53 Identities=17% Similarity=0.263 Sum_probs=46.2
Q ss_pred hHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhh
Q 025397 55 QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFAD 134 (253)
Q Consensus 55 ~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~ 134 (253)
...+..+|+-+|.+ ++|.|+++||.. ++.+|..
T Consensus 333 ~~~l~~aF~~~D~d------gdG~Is~~E~~~-----------------------------------------~~~~F~~ 365 (391)
T PRK12309 333 THAAQEIFRLYDLD------GDGFITREEWLG-----------------------------------------SDAVFDA 365 (391)
T ss_pred hHHHHHHHHHhCCC------CCCcCcHHHHHH-----------------------------------------HHHHHHH
Confidence 56788899999999 999999999831 3568999
Q ss_pred hCCCCCCcccHHHHHHHHhc
Q 025397 135 LDTEDEGKVCKGEIQNALGH 154 (253)
Q Consensus 135 lD~D~dG~LS~~ELr~aL~~ 154 (253)
+|.|+||+||.+|++.++..
T Consensus 366 ~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 366 LDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred hCCCCCCCCcHHHHHHHHHH
Confidence 99999999999999988765
No 82
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=94.88 E-value=0.0082 Score=48.26 Aligned_cols=52 Identities=10% Similarity=0.103 Sum_probs=37.5
Q ss_pred cccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHH
Q 025397 19 QPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHAS 85 (253)
Q Consensus 19 ~~F~-LD-d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~ 85 (253)
=.|. || |+| |.|++.||+++...-. .|.+=....++..|.| +++.||..|..
T Consensus 58 W~F~~LD~n~d-~~L~~~El~~l~~~l~--------~~e~C~~~F~~~CD~n------~d~~Is~~EW~ 111 (113)
T PF10591_consen 58 WKFCQLDRNKD-GVLDRSELKPLRRPLM--------PPEHCARPFFRSCDVN------KDGKISLDEWC 111 (113)
T ss_dssp HHHHHH--T-S-SEE-TTTTGGGGSTTS--------TTGGGHHHHHHHH-TT-------SSSEEHHHHH
T ss_pred hhHhhhcCCCC-CccCHHHHHHHHHHHh--------hhHHHHHHHHHHcCCC------CCCCCCHHHHc
Confidence 4599 99 999 9999999999432111 3577788999999999 99999988864
No 83
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.55 E-value=0.053 Score=30.24 Aligned_cols=27 Identities=22% Similarity=0.362 Sum_probs=24.1
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHhc
Q 025397 128 AENLFADLDTEDEGKVCKGEIQNALGH 154 (253)
Q Consensus 128 v~~~F~~lD~D~dG~LS~~ELr~aL~~ 154 (253)
+..+|+.+|.+++|.|+..+++.++..
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 568999999999999999999988764
No 84
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.09 E-value=0.66 Score=48.61 Aligned_cols=155 Identities=21% Similarity=0.282 Sum_probs=108.9
Q ss_pred cccc-CCCCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHH
Q 025397 19 QPLA-LPTSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIA 96 (253)
Q Consensus 19 ~~F~-LDd~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA 96 (253)
+.|. |--.. |.+|..+-+. +. -.+||..++.+|-.--|.| .+|..++.||+-.|+-|.+-++
T Consensus 20 ~qF~~Lkp~~-gfitg~qArnffl---------qS~LP~~VLaqIWALsDld------kDGrmdi~EfSIAmkLi~lkLq 83 (1118)
T KOG1029|consen 20 AQFGQLKPGQ-GFITGDQARNFFL---------QSGLPTPVLAQIWALSDLD------KDGRMDIREFSIAMKLIKLKLQ 83 (1118)
T ss_pred HHHhccCCCC-CccchHhhhhhHH---------hcCCChHHHHHHHHhhhcC------ccccchHHHHHHHHHHHHHHhc
Confidence 4566 77667 9999999999 44 3457999999999998999 9999999999999988877654
Q ss_pred h----------HhCCC--------------------------------------CeEEE---------EecC-------h
Q 025397 97 D----------ELKDD--------------------------------------PLVVC---------VLDG-------N 112 (253)
Q Consensus 97 ~----------~L~~~--------------------------------------Pi~v~---------v~dG-------s 112 (253)
- -|+.. |+.|+ +-+| |
T Consensus 84 G~~lP~~LPPsll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~s 163 (1118)
T KOG1029|consen 84 GIQLPPVLPPSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNS 163 (1118)
T ss_pred CCcCCCCCChHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCC
Confidence 2 11111 34443 3356 3
Q ss_pred hHHHhh----cCc-----hhH---------HHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHH
Q 025397 113 MLKLFL----GNE-----DDF---------TMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQ 174 (253)
Q Consensus 113 ~l~~~v----~~e-----~~f---------~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~ 174 (253)
.|..=- .-+ ... .--...+|..+|+..+|+||-..-|.+|.+ .|+|-. .
T Consensus 164 pl~~~ss~se~~~~~~s~~q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~q----S~Lpq~---------~ 230 (1118)
T KOG1029|consen 164 PLPHDSSVSEGRPSIESVNQLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQ----SGLPQN---------Q 230 (1118)
T ss_pred CCCCCcchhhcCccchhhhhhhhccccchhhhHHHHHhhhcccccccccccHHHHHHHHh----cCCchh---------h
Confidence 332110 000 000 011457899999999999999999999988 567622 3
Q ss_pred HHHHHHHhccCCCcccCHHHHHHHHHHH
Q 025397 175 LNDILKKHGAEGEEELGQAQFTELLRQV 202 (253)
Q Consensus 175 ~~~if~e~D~d~dg~Vd~eEF~~lmk~i 202 (253)
...|.---|.|+||.++-+||.--|-=|
T Consensus 231 LA~IW~LsDvd~DGkL~~dEfilam~li 258 (1118)
T KOG1029|consen 231 LAHIWTLSDVDGDGKLSADEFILAMHLI 258 (1118)
T ss_pred HhhheeeeccCCCCcccHHHHHHHHHHH
Confidence 4555666789999999999998666544
No 85
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=93.94 E-value=0.087 Score=47.07 Aligned_cols=72 Identities=14% Similarity=0.145 Sum_probs=55.3
Q ss_pred hHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHH
Q 025397 13 QLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLAS 89 (253)
Q Consensus 13 ~l~~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~ 89 (253)
+|..+-.+|+ +| +.| |.|+.-||+- +-++|+.++|++ .-.++++.|.| .+|.|+.-||.-.++
T Consensus 97 qIk~~~~~Fk~yDe~rD-gfIdl~ELK~mmEKLgapQTHL~-------lK~mikeVded------~dgklSfreflLIfr 162 (244)
T KOG0041|consen 97 QIKDAESMFKQYDEDRD-GFIDLMELKRMMEKLGAPQTHLG-------LKNMIKEVDED------FDGKLSFREFLLIFR 162 (244)
T ss_pred HHHHHHHHHHHhccccc-ccccHHHHHHHHHHhCCchhhHH-------HHHHHHHhhcc------cccchhHHHHHHHHH
Confidence 4555558999 99 999 9999999999 888888666666 34678888888 899999888776544
Q ss_pred HHHHHHHhHhCC
Q 025397 90 DYITAIADELKD 101 (253)
Q Consensus 90 ~~l~~iA~~L~~ 101 (253)
. +.|-+|..
T Consensus 163 k---aaagEL~~ 171 (244)
T KOG0041|consen 163 K---AAAGELQE 171 (244)
T ss_pred H---Hhcccccc
Confidence 3 44455554
No 86
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=93.73 E-value=0.9 Score=45.57 Aligned_cols=114 Identities=17% Similarity=0.244 Sum_probs=80.9
Q ss_pred CC-CCCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCC
Q 025397 23 LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKD 101 (253)
Q Consensus 23 LD-d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~ 101 (253)
-| ..| |-||.+|++.+..... -|+.++.-+|+-||.. ++++++-+.|...++.-.. ...
T Consensus 83 aD~tKD-glisf~eF~afe~~lC--------~pDal~~~aFqlFDr~------~~~~vs~~~~~~if~~t~l-----~~~ 142 (694)
T KOG0751|consen 83 ADQTKD-GLISFQEFRAFESVLC--------APDALFEVAFQLFDRL------GNGEVSFEDVADIFGQTNL-----HHH 142 (694)
T ss_pred hhhccc-ccccHHHHHHHHhhcc--------CchHHHHHHHHHhccc------CCCceehHHHHHHHhcccc-----ccC
Confidence 45 778 9999999999654444 5899999999999999 8999998888886654211 111
Q ss_pred CCeEEEEecChhHHHhhcCch-------hHHHH--------HHHHHhhhCCCCCCcccHHHHHHHHhccCccc
Q 025397 102 DPLVVCVLDGNMLKLFLGNED-------DFTML--------AENLFADLDTEDEGKVCKGEIQNALGHMGVEF 159 (253)
Q Consensus 102 ~Pi~v~v~dGs~l~~~v~~e~-------~f~~~--------v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~ 159 (253)
+-.-.|+..|+....+.+ +|..+ ..++|++-|+.++|.+|.=..+..+-.+..++
T Consensus 143 ---~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~E~~~qafr~~d~~~ng~is~Ldfq~imvt~~~h~ 212 (694)
T KOG0751|consen 143 ---IPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQLEHAEQAFREKDKAKNGFISVLDFQDIMVTIRIHL 212 (694)
T ss_pred ---CCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcccCCCeeeeechHhhhhhhhhhc
Confidence 111236666655444432 23332 56899999999999999888888776665543
No 87
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=93.65 E-value=0.13 Score=50.82 Aligned_cols=64 Identities=3% Similarity=-0.071 Sum_probs=53.9
Q ss_pred cccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHH
Q 025397 19 QPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDY 91 (253)
Q Consensus 19 ~~F~-LD-d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~ 91 (253)
.+|. +| |++ |-+|..|++...++-+ +|....+.+..+.++-+.+|-| ++|.||..||.+.++-+
T Consensus 551 tiF~~iD~D~S-G~isldEF~~a~~l~~--sh~~~~i~~~~i~~la~~mD~N------kDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 551 TIFNIIDADNS-GEISLDEFRTAWKLLS--SHMNGAISDDEILELARSMDLN------KDGKIDLNEFLEAFRLV 616 (631)
T ss_pred HHHHHhccCCC-CceeHHHHHHHHHHHH--hhcCCCcCHHHHHHHHHhhccC------CCCcccHHHHHHHHhhh
Confidence 7899 99 999 9999999999666655 4666566688888899999999 99999999999976643
No 88
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=93.29 E-value=0.19 Score=55.60 Aligned_cols=70 Identities=14% Similarity=0.334 Sum_probs=56.2
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 128 v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
-.-+|.+||++++|.|.+.+.+..|..+|=. +|-.. ..+. ++.+.+++.-+|.+.+|-|+..+|...|-+
T Consensus 2255 Fs~~fkhFDkek~G~Ldhq~F~sCLrslgY~--lpmvE-e~~~-~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~ 2324 (2399)
T KOG0040|consen 2255 FSMMFKHFDKEKNGRLDHQHFKSCLRSLGYD--LPMVE-EGEP-EPEFEEILDLVDPNRDGYVSLQDYMAFMIS 2324 (2399)
T ss_pred HHHHHHHhchhhccCCcHHHHHHHHHhcCCC--Ccccc-cCCC-ChhHHHHHHhcCCCCcCcccHHHHHHHHHh
Confidence 3458999999999999999999999998844 33222 1121 356899999999999999999999998853
No 89
>PF14658 EF-hand_9: EF-hand domain
Probab=93.00 E-value=0.39 Score=35.40 Aligned_cols=59 Identities=10% Similarity=0.101 Sum_probs=47.4
Q ss_pred ccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHH
Q 025397 20 PLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASD 90 (253)
Q Consensus 20 ~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~ 90 (253)
.|. -| ++. |.+.-++|.. |...+. .+.++.-++.+.+.+|.++ ++|+|+.+.|...||+
T Consensus 3 ~F~~fD~~~t-G~V~v~~l~~~Lra~~~------~~p~e~~Lq~l~~elDP~g-----~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 3 AFDAFDTQKT-GRVPVSDLITYLRAVTG------RSPEESELQDLINELDPEG-----RDGSVNFDTFLAIMRD 64 (66)
T ss_pred chhhcCCcCC-ceEeHHHHHHHHHHHcC------CCCcHHHHHHHHHHhCCCC-----CCceEeHHHHHHHHHH
Confidence 478 88 777 9999999999 554444 2345789999999999992 3499999999998886
No 90
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=92.93 E-value=0.46 Score=46.98 Aligned_cols=111 Identities=18% Similarity=0.210 Sum_probs=63.9
Q ss_pred cccc-CC-CCCCccccHHHHHH-HHHccccccccCCC---C-Ch-------HHHHHHHHhhcCCCCcccccccccCHHHH
Q 025397 19 QPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLS---L-PQ-------NLKSTALKHISGSDDDVTFRIKEFDRDHA 84 (253)
Q Consensus 19 ~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~---l-p~-------~~~~~~l~~~d~~~~~~~~~~g~i~~~eF 84 (253)
+.++ |+ .+. |.|...++++ |+++-+ +|. +. . |+ .....+|=-++.. +.|.|.-.+.
T Consensus 178 ~~v~~l~~~~~-~yl~q~df~~~Lqeli~--Thp-l~~l~~~pEf~~~Y~~tvi~rIFy~~nrs------~tG~iti~el 247 (493)
T KOG2562|consen 178 QFVNLLIQAGC-SYLRQDDFKPYLQELIA--THP-LEFLDEEPEFQERYAETVIQRIFYYLNRS------RTGRITIQEL 247 (493)
T ss_pred HHHHHHhccCc-cceeccccHHHHHHHHh--cCC-chhhccChhHHHHHHHHHhhhhheeeCCc------cCCceeHHHH
Confidence 4566 78 777 9999999999 888877 333 11 1 21 2445566555666 7888875544
Q ss_pred HHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHH
Q 025397 85 SKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQN 150 (253)
Q Consensus 85 ~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~ 150 (253)
+. ...+.+|+..-.+. |-+.+..+-.=|. .-.+...|-+||+||||.|++++|..
T Consensus 248 ~~--snll~~l~~l~eEe-------d~nq~~~~FS~e~--f~viy~kFweLD~Dhd~lidk~~L~r 302 (493)
T KOG2562|consen 248 LR--SNLLDALLELDEEE-------DINQVTRYFSYEH--FYVIYCKFWELDTDHDGLIDKEDLKR 302 (493)
T ss_pred HH--hHHHHHHHHHHHHh-------hhhhhhhheeHHH--HHHHHHHHhhhccccccccCHHHHHH
Confidence 22 11222222221110 1112222222222 12345569999999999999999974
No 91
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=92.65 E-value=0.32 Score=41.10 Aligned_cols=66 Identities=18% Similarity=0.325 Sum_probs=48.0
Q ss_pred HHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccC--CCcccCHHHHHHHHHHH
Q 025397 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAE--GEEELGQAQFTELLRQV 202 (253)
Q Consensus 126 ~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d--~dg~Vd~eEF~~lmk~i 202 (253)
..+..+|.-+|..+||+|+....-..|..+| ..|.. ..+...+.++..+ .-..+++|+|+-++..+
T Consensus 11 ~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG----~nPT~-------aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~v 78 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTGDGKISGSQVGDVLRALG----QNPTN-------AEVLKVLGQPKRREMNVKRLDFEEFLPMYQQV 78 (152)
T ss_pred HHHHHHHHHHhccCcccccHHHHHHHHHHhc----CCCcH-------HHHHHHHcCcccchhhhhhhhHHHHHHHHHHH
Confidence 4589999999999999999998888877744 44443 2345556666555 44678888888777655
No 92
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=91.47 E-value=0.38 Score=48.33 Aligned_cols=72 Identities=15% Similarity=0.138 Sum_probs=58.8
Q ss_pred hhhHhhhhcccc-CCCCCCccccHHHHHH-HHHccccccccCCCC-ChHHHHHHHHhhcCCCCcccccccccCHHHHHHH
Q 025397 11 GTQLRSLSQPLA-LPTSDSSTVTGAQLLD-FAENEASSSLFGLSL-PQNLKSTALKHISGSDDDVTFRIKEFDRDHASKL 87 (253)
Q Consensus 11 G~~l~~l~~~F~-LDd~d~G~Ls~~El~~-l~~~~~~~~~~~~~l-p~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~ 87 (253)
-.+++++.+.|. +|+++ |.+|..|+.+ +.+.+. ..|- -..+...++...+.| .+|.|+.|+|...
T Consensus 15 q~El~~l~~kF~~~d~~~-G~v~~~~l~~~f~k~~~-----~~g~~~~eei~~~l~~~~~~------~~g~v~fe~f~~~ 82 (627)
T KOG0046|consen 15 QEELRELKEKFNKLDDQK-GYVTVYELPDAFKKAKL-----PLGYFVREEIKEILGEVGVD------ADGRVEFEEFVGI 82 (627)
T ss_pred HHHHHHHHHHHHhhcCCC-CeeehHHhHHHHHHhcc-----cccchhHHHHHHHHhccCCC------cCCccCHHHHHHH
Confidence 458899999999 99888 9999999999 888877 3333 257888899999999 8999999999886
Q ss_pred HHHHHHH
Q 025397 88 ASDYITA 94 (253)
Q Consensus 88 l~~~l~~ 94 (253)
+..+..-
T Consensus 83 ~~~l~s~ 89 (627)
T KOG0046|consen 83 FLNLKSK 89 (627)
T ss_pred HHhhhhh
Confidence 5555443
No 93
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=89.17 E-value=11 Score=38.17 Aligned_cols=69 Identities=22% Similarity=0.352 Sum_probs=52.2
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHH-hccCCCcccCHHHHHHHHHHHHH
Q 025397 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKK-HGAEGEEELGQAQFTELLRQVLQ 204 (253)
Q Consensus 127 ~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e-~D~d~dg~Vd~eEF~~lmk~iL~ 204 (253)
.-..+|+-+|+.++|.+|.++....+++...++-+|-.-++ +-++. |..+...-++|.||++++.+.-+
T Consensus 109 l~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~---------efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~ 178 (694)
T KOG0751|consen 109 LFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDS---------EFIKLHFGDIRKRHLNYAEFTQFLHEFQL 178 (694)
T ss_pred HHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCc---------chHHHHhhhHHHHhccHHHHHHHHHHHHH
Confidence 45678999999999999999999999998888777743311 12222 45555556899999999988743
No 94
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=88.62 E-value=1 Score=33.32 Aligned_cols=63 Identities=22% Similarity=0.361 Sum_probs=47.5
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccC----CCcccCHHHHHHHHH
Q 025397 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAE----GEEELGQAQFTELLR 200 (253)
Q Consensus 128 v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d----~dg~Vd~eEF~~lmk 200 (253)
+..+|+.+-. +.+.+|.++++.+|.. ++|.+... ...+..++.++..+ ..+.++.+.|...|.
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~---eQ~~~~~~------~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~ 68 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLRE---EQGEPRLT------DEQAKELIEKFEPDERNRQKGQLTLEGFTRFLF 68 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHH---TSS-TTSS------HHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHH---HhccccCc------HHHHHHHHHHHccchhhcccCCcCHHHHHHHHC
Confidence 6789999955 6889999999999965 34444333 45788899887544 468889999998874
No 95
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=88.51 E-value=0.59 Score=43.19 Aligned_cols=69 Identities=12% Similarity=0.160 Sum_probs=49.1
Q ss_pred hHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHH-HHHHHHHhccCCCcccCHHHHHHHHH
Q 025397 123 DFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQ-LNDILKKHGAEGEEELGQAQFTELLR 200 (253)
Q Consensus 123 ~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~-~~~if~e~D~d~dg~Vd~eEF~~lmk 200 (253)
.....+..+|+..|.+.||+||..|++.-......++ + . .+.- -.--|.-+|.|+||.|+-+||+--+.
T Consensus 98 rsrrklmviFsKvDVNtDrkisAkEmqrwImektaEH-f---q-----eameeSkthFraVDpdgDGhvsWdEykvkFl 167 (362)
T KOG4251|consen 98 RSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEH-F---Q-----EAMEESKTHFRAVDPDGDGHVSWDEYKVKFL 167 (362)
T ss_pred HHHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHH-H---H-----HHHhhhhhheeeeCCCCCCceehhhhhhHHH
Confidence 4556688999999999999999999987765543321 0 0 0000 01135668999999999999986664
No 96
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=87.73 E-value=1.3 Score=42.38 Aligned_cols=102 Identities=9% Similarity=0.128 Sum_probs=72.8
Q ss_pred hHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhh
Q 025397 55 QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFAD 134 (253)
Q Consensus 55 ~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~ 134 (253)
.+...+.|.-||.+ ++|.+| ++++.-++| -|. ++.--.-++.-+|+.
T Consensus 258 sd~l~~~f~LFde~------~tg~~D-------~re~v~~la-vlc-------------------~p~~t~~iiq~afk~ 304 (412)
T KOG4666|consen 258 SDKLAPTFMLFDEG------TTGNGD-------YRETVKTLA-VLC-------------------GPPVTPVIIQYAFKR 304 (412)
T ss_pred hhhhhhhhheecCC------CCCccc-------HHHHhhhhe-eee-------------------CCCCcHHHHHHHHHh
Confidence 46888999999999 899999 222332322 122 233344568889999
Q ss_pred hCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 135 LDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 135 lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
++.+-||.+..++|--.|+- ..|+|.. -+..+|...+...+++|.+++|++++..
T Consensus 305 f~v~eDg~~ge~~ls~ilq~---~lgv~~l---------~v~~lf~~i~q~d~~ki~~~~f~~fa~~ 359 (412)
T KOG4666|consen 305 FSVAEDGISGEHILSLILQV---VLGVEVL---------RVPVLFPSIEQKDDPKIYASNFRKFAAT 359 (412)
T ss_pred cccccccccchHHHHHHHHH---hcCccee---------eccccchhhhcccCcceeHHHHHHHHHh
Confidence 99999999988777755544 3455522 2445689999999999999999988753
No 97
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=87.60 E-value=3.1 Score=42.49 Aligned_cols=142 Identities=14% Similarity=0.186 Sum_probs=80.3
Q ss_pred hHhhhhcccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChH----HHHHHHHhhcCCCCcccccccccCHHHHHH
Q 025397 13 QLRSLSQPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQN----LKSTALKHISGSDDDVTFRIKEFDRDHASK 86 (253)
Q Consensus 13 ~l~~l~~~F~-LD-d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~----~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~ 86 (253)
.++.+..+|. -| |.| |.||..||..++..-. +.++-+. ++..+-+.+..+ +. +..++..-|.-
T Consensus 193 ~v~al~RIFki~D~d~D-~~Lsd~Eln~fQ~~CF-----~~pl~p~~l~~vk~vv~e~~p~g---v~--~~~ltl~GFLf 261 (625)
T KOG1707|consen 193 CVKALKRIFKISDSDND-GALSDAELNDFQKKCF-----NTPLDPQELEDVKNVVQEICPDG---VY--ERGLTLPGFLF 261 (625)
T ss_pred HHHHHHHHHhhhccccc-cccchhhhhHHHHHhc-----CCCCCHHHHHHHHHHHHhhcCch---hh--hccccccchHH
Confidence 4566668899 78 999 9999999999775544 5555332 333333333322 22 22333223433
Q ss_pred HHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCC
Q 025397 87 LASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSE 166 (253)
Q Consensus 87 ~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~ 166 (253)
+- .++|-.|-.+ - .+.+-+.+.-+++=.|+.+.|.+- +-+||-..
T Consensus 262 L~---~lfiergr~E--------------------t-----tW~iLR~fgY~DsleL~~~~l~p~-------~~~~p~~s 306 (625)
T KOG1707|consen 262 LN---TLFIERGRHE--------------------T-----TWTILRKFGYTDSLELTDEYLPPR-------LKVPPDQS 306 (625)
T ss_pred HH---HHHHHhcccc--------------------c-----hhhhhhhcCCcchhhhhhhhcCcc-------ccCCCCcc
Confidence 21 2222222222 2 444455555444445554444422 33455543
Q ss_pred CCCCchHH---HHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 167 CRSTEFPQ---LNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 167 ~~~~~~~~---~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
.+-. ..- +..+|..+|.|+||.++-+||..+++.
T Consensus 307 ~ELs-~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~ 343 (625)
T KOG1707|consen 307 VELS-PKGYRFLVDVFEKFDRDNDGALSPEELKDLFST 343 (625)
T ss_pred eecc-HHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhh
Confidence 3332 223 477899999999999999999988864
No 98
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=87.06 E-value=2.1 Score=30.11 Aligned_cols=48 Identities=2% Similarity=0.052 Sum_probs=36.2
Q ss_pred cccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHH
Q 025397 30 TVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASD 90 (253)
Q Consensus 30 ~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~ 90 (253)
++|..|++. |..+.+ . +.+.-...+|+++|++ ++|.++.+||.+-.+.
T Consensus 1 kmsf~Evk~lLk~~NI-----~--~~~~yA~~LFq~~D~s------~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNI-----E--MDDEYARQLFQECDKS------QSGRLEGEEFEEFYKR 49 (51)
T ss_dssp EBEHHHHHHHHHHTT-----------HHHHHHHHHHH-SS------SSSEBEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcc-----C--cCHHHHHHHHHHhccc------CCCCccHHHHHHHHHH
Confidence 478899999 777777 5 4577788899999999 8999999999875543
No 99
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=83.96 E-value=1.2 Score=42.90 Aligned_cols=59 Identities=10% Similarity=0.121 Sum_probs=47.3
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHH
Q 025397 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLR 200 (253)
Q Consensus 127 ~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk 200 (253)
.+-=.|..+|.+.||.|+..||+ ++..-. ...-+...|...|...||.||-.|.+--+.
T Consensus 251 s~gWMFnklD~N~Dl~Ld~sEl~-~I~ldk--------------nE~CikpFfnsCD~~kDg~iS~~EWC~CF~ 309 (434)
T KOG3555|consen 251 SLGWMFNKLDTNYDLLLDQSELR-AIELDK--------------NEACIKPFFNSCDTYKDGSISTNEWCYCFQ 309 (434)
T ss_pred hhhhhhhccccccccccCHHHhh-hhhccC--------------chhHHHHHHhhhcccccCccccchhhhhhc
Confidence 46678999999999999999999 443311 123578889999999999999999886654
No 100
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=83.76 E-value=8.8 Score=35.21 Aligned_cols=99 Identities=15% Similarity=0.118 Sum_probs=63.4
Q ss_pred CCCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCe
Q 025397 25 TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPL 104 (253)
Q Consensus 25 d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi 104 (253)
-.| |.+|..|+..+..+.. .+++++.....+.+-|+.. .....+.++|...++... ..
T Consensus 67 kAD-G~Vse~Ei~~~~~l~~-----~~~l~~~~r~~a~~lf~~~------k~~~~~l~~~~~~~~~~~-------~~--- 124 (267)
T PRK09430 67 KAK-GRVTEADIRIASQLMD-----RMNLHGEARRAAQQAFREG------KEPDFPLREKLRQFRSVC-------GG--- 124 (267)
T ss_pred hcC-CCcCHHHHHHHHHHHH-----HcCCCHHHHHHHHHHHHHh------cccCCCHHHHHHHHHHHh-------cc---
Confidence 568 9999999996544444 3456665533444444445 455577777777665544 22
Q ss_pred EEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCC
Q 025397 105 VVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPP 163 (253)
Q Consensus 105 ~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp 163 (253)
.+.....+++-.|+.-=.| |.++..|-. .|.+++..+|+++
T Consensus 125 ---------------r~~l~~~lL~~l~~vA~AD--G~l~~~E~~-~L~~Ia~~Lgis~ 165 (267)
T PRK09430 125 ---------------RFDLLRMFLEIQIQAAFAD--GSLHPNERQ-VLYVIAEELGFSR 165 (267)
T ss_pred ---------------cHHHHHHHHHHHHHHHHhc--CCCCHHHHH-HHHHHHHHcCCCH
Confidence 2333444456666665555 889999966 8888888888874
No 101
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=80.37 E-value=5.2 Score=40.87 Aligned_cols=65 Identities=17% Similarity=0.219 Sum_probs=55.7
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHH
Q 025397 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 203 (253)
Q Consensus 128 v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL 203 (253)
....|..+|.|+.|..+...++.+|+..++ |+| .....+++++.|.+.+|.+...||.++|..+-
T Consensus 595 ~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~--~~d---------~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 595 RKTRFAFLDADKKAYQAIADVLKVLKSENV--GWD---------EDRLHEELQEADENLNGFVELREFLQLMSAIK 659 (680)
T ss_pred HHHHHHhhcchHHHHHHHHHHHHHHHHhcC--CCC---------HHHHHHHHHHHHHhhcceeeHHHHHHHHHHHh
Confidence 456899999999999999999999999774 333 35789999999999999999999999988664
No 102
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=79.58 E-value=4.4 Score=30.95 Aligned_cols=90 Identities=13% Similarity=0.098 Sum_probs=60.6
Q ss_pred CCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeE
Q 025397 26 SDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLV 105 (253)
Q Consensus 26 ~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~ 105 (253)
.| |.+|..|...+..+-. .+| ++++.....++..+... .....+..+|...++...
T Consensus 12 aD-G~v~~~E~~~i~~~l~--~~~--~l~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~------------- 67 (104)
T cd07313 12 AD-GEYDEEERAAIDRLLA--ERF--GLDAEEAAELLAEAEAL------EEEAPDLYEFTSLIKEHF------------- 67 (104)
T ss_pred Hc-CCCCHHHHHHHHHHHH--HHh--CcCHHHHHHHHHHHHHH------HHhCCCHHHHHHHHHHhC-------------
Confidence 37 9999999999766644 223 47788888888888777 667788878777544322
Q ss_pred EEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccC
Q 025397 106 VCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMG 156 (253)
Q Consensus 106 v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~ 156 (253)
++..=..++...|+---.| |.++..|.. .+.+++
T Consensus 68 --------------~~~~r~~~l~~L~~vA~AD--G~~~~~E~~-~l~~ia 101 (104)
T cd07313 68 --------------DYEERLELVEALWEVAYAD--GELDEYEEH-LIRRVA 101 (104)
T ss_pred --------------CHHHHHHHHHHHHHHHHhc--CCCCHHHHH-HHHHHH
Confidence 1122234577777777665 788888877 555543
No 103
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=78.97 E-value=7.4 Score=29.56 Aligned_cols=92 Identities=14% Similarity=0.193 Sum_probs=52.9
Q ss_pred CCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeE
Q 025397 26 SDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLV 105 (253)
Q Consensus 26 ~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~ 105 (253)
-| |.+|.+|...+..+-. ..++++.....+...|... .+...+..+|...+++ .++.
T Consensus 12 aD-G~v~~~E~~~i~~~l~-----~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~-------~~~~---- 68 (106)
T cd07316 12 AD-GRVSEAEIQAARALMD-----QMGLDAEARREAIRLFNEG------KESDFGLEEYARQFRR-------ACGG---- 68 (106)
T ss_pred cc-CCcCHHHHHHHHHHHH-----HcCCCHHHHHHHHHHHHHh------CcCCCCHHHHHHHHHH-------HHCC----
Confidence 47 9999999999777665 3334444445555555444 3333565555444333 2221
Q ss_pred EEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCc
Q 025397 106 VCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGV 157 (253)
Q Consensus 106 v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v 157 (253)
++..=..++..+|.---.| |.++..|-. .+.+++.
T Consensus 69 --------------~~~~r~~~l~~l~~vA~AD--G~~~~~E~~-~l~~ia~ 103 (106)
T cd07316 69 --------------RPELLLQLLEFLFQIAYAD--GELSEAERE-LLRRIAR 103 (106)
T ss_pred --------------CHHHHHHHHHHHHHHHHHc--CCCCHHHHH-HHHHHHH
Confidence 2222334566666666664 788888877 6655443
No 104
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.71 E-value=5.7 Score=32.85 Aligned_cols=61 Identities=15% Similarity=0.112 Sum_probs=44.0
Q ss_pred cccc-CC-CCCCccccHHHHHH-HHHccc--cccccCCCCC-----hHHHHHHHHhhcCCCCcccccccccCHHHHHH
Q 025397 19 QPLA-LP-TSDSSTVTGAQLLD-FAENEA--SSSLFGLSLP-----QNLKSTALKHISGSDDDVTFRIKEFDRDHASK 86 (253)
Q Consensus 19 ~~F~-LD-d~d~G~Ls~~El~~-l~~~~~--~~~~~~~~lp-----~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~ 86 (253)
..|+ =| |++ +.|.+-||.. +-+... -+-+-..++| .++++.+++.-|-| ++|.|+-.||..
T Consensus 71 HYF~MHDldkn-n~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN------~DG~IDYgEflK 141 (144)
T KOG4065|consen 71 HYFSMHDLDKN-NFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFN------GDGVIDYGEFLK 141 (144)
T ss_pred hhhhhhccCcC-CcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccC------CCceeeHHHHHh
Confidence 6788 77 888 9999999998 766544 1111222343 36888888887777 899999888865
No 105
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=74.60 E-value=12 Score=32.19 Aligned_cols=94 Identities=15% Similarity=0.200 Sum_probs=62.8
Q ss_pred CCCCccccHHHHHHHHHccccccccCCCCC-hHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCC
Q 025397 25 TSDSSTVTGAQLLDFAENEASSSLFGLSLP-QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDP 103 (253)
Q Consensus 25 d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp-~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~P 103 (253)
+++ |.||...+.++...-. .+ .| +--..-+|+-+|-| +++-|..+....-+.. |.+
T Consensus 83 DG~-GnlsfddFlDmfSV~s-----E~-APrdlK~~YAFkIYDfd------~D~~i~~~DL~~~l~~--------lTr-- 139 (189)
T KOG0038|consen 83 DGR-GNLSFDDFLDMFSVFS-----EM-APRDLKAKYAFKIYDFD------GDEFIGHDDLEKTLTS--------LTR-- 139 (189)
T ss_pred CCC-CcccHHHHHHHHHHHH-----hh-ChHHhhhhheeEEeecC------CCCcccHHHHHHHHHH--------Hhh--
Confidence 777 9999999999332222 21 35 33456678888888 7888875544332222 111
Q ss_pred eEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhc
Q 025397 104 LVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGH 154 (253)
Q Consensus 104 i~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~ 154 (253)
.=+. +.+..-+++++..+-|.||||+||-.|.+...-+
T Consensus 140 ------------~eLs-~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 140 ------------DELS-DEEVELICEKVIEEADLDGDGKLSFAEFEHVILR 177 (189)
T ss_pred ------------ccCC-HHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence 1122 2347778999999999999999999999877654
No 106
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=72.63 E-value=1.5 Score=41.91 Aligned_cols=101 Identities=11% Similarity=0.082 Sum_probs=65.7
Q ss_pred ccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCc
Q 025397 78 EFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGV 157 (253)
Q Consensus 78 ~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v 157 (253)
+--+.||...|.++|. .-+|++..++|.=+..-.|| +.++.=-|.+||+|+++.|.+.|++++=.-+..
T Consensus 296 e~KKteFL~~Ll~aL~--------Tdmv~s~~~as~gr~~e~De---eRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k 364 (421)
T KOG4578|consen 296 EKKKTEFLTSLLDALK--------TDMVMSGINASNGRKSEPDE---ERVVHWYFNQLDKNSNNDIERREWKPFKRVLLK 364 (421)
T ss_pred cchhhHHHHHHHHHHh--------hhhhhhcccccCCcccCCCh---hheeeeeeeeecccccCccchhhcchHHHHHHh
Confidence 4567788777666653 23455556666333333342 234666799999999999999999976433322
Q ss_pred ccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHH
Q 025397 158 EFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELL 199 (253)
Q Consensus 158 ~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lm 199 (253)
.. -| -.--..+++-.|-|+|..|+..|.+.-+
T Consensus 365 ~s-~~---------rkC~rk~~~yCDlNkDKkISl~Ew~~CL 396 (421)
T KOG4578|consen 365 KS-KP---------RKCSRKFFKYCDLNKDKKISLDEWRGCL 396 (421)
T ss_pred hc-cH---------HHHhhhcchhcccCCCceecHHHHhhhh
Confidence 10 00 1123567788999999999999987655
No 107
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=71.89 E-value=1.5 Score=35.17 Aligned_cols=99 Identities=16% Similarity=0.202 Sum_probs=57.2
Q ss_pred CCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeE
Q 025397 26 SDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLV 105 (253)
Q Consensus 26 ~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~ 105 (253)
-| |.++.+|+..+..+-. . ..++|+.....++..++.- ....++..+|.. .++.
T Consensus 36 aD-G~v~~~E~~~i~~~~~--~--~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~-----------~l~~---- 89 (140)
T PF05099_consen 36 AD-GEVDPEEIEAIRQLLA--E--RFGLSPEEAEELIELADEL------KQEPIDLEELLR-----------ELRD---- 89 (140)
T ss_dssp TT-SS--CHHHHHHHHHHH--H--CGCGSCHHHHHHHHHHCHH------HHHCCHHHHHHH-----------HHCT----
T ss_pred cC-CCCCHHHHHHHHHHHH--H--hhCCCHHHHHHHHHHHHHH------HhccccHHHHHH-----------HHHH----
Confidence 47 8899999888554432 1 2335555566666665554 334444333322 2222
Q ss_pred EEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCC
Q 025397 106 VCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFS 165 (253)
Q Consensus 106 v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~ 165 (253)
.+. +..-..++..++.-.-.| |.++..|-+ .+.+++..+|+|+..
T Consensus 90 -----------~~~-~~~r~~ll~~l~~ia~AD--G~~~~~E~~-~l~~ia~~L~i~~~~ 134 (140)
T PF05099_consen 90 -----------SLS-PEEREDLLRMLIAIAYAD--GEISPEEQE-FLRRIAEALGISEED 134 (140)
T ss_dssp -----------S---HHHHHHHHHHHHHHCTCT--TC-SCCHHH-HHHHHHHHCTS-SS-
T ss_pred -----------hhc-hHHHHHHHHHHHHHHhcC--CCCCHHHHH-HHHHHHHHcCCCHHH
Confidence 011 333556788888888886 789888888 888888888998654
No 108
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=69.85 E-value=12 Score=39.76 Aligned_cols=64 Identities=14% Similarity=0.248 Sum_probs=51.8
Q ss_pred HHHhhhC--CCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHHH
Q 025397 130 NLFADLD--TEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDI 206 (253)
Q Consensus 130 ~~F~~lD--~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~~ 206 (253)
+-|++|+ +.+.|+|+-..-|.+|-+ .|+| ..+..+|..-.|.|+||..++.||--.||=|.+.+
T Consensus 17 K~~~qF~~Lkp~~gfitg~qArnfflq----S~LP---------~~VLaqIWALsDldkDGrmdi~EfSIAmkLi~lkL 82 (1118)
T KOG1029|consen 17 KHDAQFGQLKPGQGFITGDQARNFFLQ----SGLP---------TPVLAQIWALSDLDKDGRMDIREFSIAMKLIKLKL 82 (1118)
T ss_pred HHHHHHhccCCCCCccchHhhhhhHHh----cCCC---------hHHHHHHHHhhhcCccccchHHHHHHHHHHHHHHh
Confidence 3444444 256899999999999988 6788 34678889999999999999999999998887654
No 109
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=66.98 E-value=10 Score=38.33 Aligned_cols=62 Identities=15% Similarity=0.231 Sum_probs=50.0
Q ss_pred HHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHH
Q 025397 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLR 200 (253)
Q Consensus 126 ~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk 200 (253)
....+-|+.+-.|-+|.|+-.--+.+|.+-. +|.. .+.-|.+-.|.|.||.++..|||+.|.
T Consensus 231 eYYvnQFrtvQpDp~gfisGsaAknFFtKSk----lpi~---------ELshIWeLsD~d~DGALtL~EFcAAfH 292 (737)
T KOG1955|consen 231 EYYVNQFRTVQPDPHGFISGSAAKNFFTKSK----LPIE---------ELSHIWELSDVDRDGALTLSEFCAAFH 292 (737)
T ss_pred HHHHhhhhcccCCcccccccHHHHhhhhhcc----CchH---------HHHHHHhhcccCccccccHHHHHhhHh
Confidence 3467889999999999999999999998833 4422 245566778999999999999999875
No 110
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=66.28 E-value=12 Score=39.34 Aligned_cols=68 Identities=13% Similarity=0.324 Sum_probs=56.9
Q ss_pred HHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHH
Q 025397 124 FTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 202 (253)
Q Consensus 124 f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~i 202 (253)
-...+..+|.+.|++++|.++..+...++..+.+.++ ......+|++.+.-.++++..++|..+....
T Consensus 134 ~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~-----------~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~ 201 (746)
T KOG0169|consen 134 REHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLS-----------ESKARRLFKESDNSQTGKLEEEEFVKFRKEL 201 (746)
T ss_pred HHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhh-----------HHHHHHHHHHHHhhccceehHHHHHHHHHhh
Confidence 4567899999999999999999999999999886541 3345778999988899999999998877654
No 111
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=63.32 E-value=9.2 Score=40.77 Aligned_cols=167 Identities=14% Similarity=0.198 Sum_probs=107.9
Q ss_pred hHhhhhcccc-CCCCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHH
Q 025397 13 QLRSLSQPLA-LPTSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASD 90 (253)
Q Consensus 13 ~l~~l~~~F~-LDd~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~ 90 (253)
+.-.+-++|. +.... |.++.+-.++ |+. -++|..+...+-.-.|.| .+|.++..||.-.|+-
T Consensus 127 e~aky~q~f~s~~p~~-g~~sg~~~~pil~~---------s~Lp~~~l~~iw~l~d~d------~~g~Ld~~ef~~am~l 190 (847)
T KOG0998|consen 127 EQAKYDQIFRSLSPSN-GLLSGDKAKPILLN---------SKLPSDVLGRIWELSDID------KDGNLDRDEFAVAMHL 190 (847)
T ss_pred HHHHHHHHHhccCCCC-Cccccchhhhhhhc---------CCCChhhhcccccccccc------ccCCCChhhhhhhhhH
Confidence 3334447788 88667 9999998888 442 335666666666666777 8999999999887776
Q ss_pred HHHHHHhHhCCCCeEE----------EEe-cC------------------hhHH--------------------------
Q 025397 91 YITAIADELKDDPLVV----------CVL-DG------------------NMLK-------------------------- 115 (253)
Q Consensus 91 ~l~~iA~~L~~~Pi~v----------~v~-dG------------------s~l~-------------------------- 115 (253)
+...|---+.-.|-.. ... .+ ..++
T Consensus 191 ~~~~l~~~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~ 270 (847)
T KOG0998|consen 191 INDLLNGNSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQLI 270 (847)
T ss_pred HHHHhhcccCCCCccCCcccCCcchhcccccCcccccccccccccccccccccccccchhcccCCccccccccccccccc
Confidence 6555541111111110 000 11 0000
Q ss_pred -Hh--hcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCH
Q 025397 116 -LF--LGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQ 192 (253)
Q Consensus 116 -~~--v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~ 192 (253)
.+ +-.+..-.. ...+|.+.|++.+|+|+-.+.+..|.. +|++... +..+....|.+..|.+++
T Consensus 271 ~s~~~~vsp~d~~~-~~~if~q~d~~~dG~I~s~~~~~~f~~----~gl~~~~---------l~~~w~l~d~~n~~~ls~ 336 (847)
T KOG0998|consen 271 VSWSPKVSPSDKQK-YSKIFSQVDKDNDGSISSNEARNIFLP----FGLSKPR---------LAHVWLLADTQNTGTLSK 336 (847)
T ss_pred cccCcccChHHHHH-HHHHHHhccccCCCccccccccccccc----CCCChhh---------hhhhhhhcchhccCcccc
Confidence 00 111111111 334899999999999999999988866 6666433 345567789999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 025397 193 AQFTELLRQVLQDIVDA 209 (253)
Q Consensus 193 eEF~~lmk~iL~~~A~~ 209 (253)
.||+-.|-.+...-+++
T Consensus 337 ~ef~~~~~~~~~~~~~g 353 (847)
T KOG0998|consen 337 DEFALAMHLLEQKRAEG 353 (847)
T ss_pred cccchhhhhhhhhhhcC
Confidence 99999998888876666
No 112
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=61.12 E-value=7.8 Score=37.46 Aligned_cols=49 Identities=6% Similarity=-0.007 Sum_probs=38.6
Q ss_pred cccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHH
Q 025397 19 QPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHA 84 (253)
Q Consensus 19 ~~F~-LD-d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF 84 (253)
=+|. || |.| |.|+.+||+++..=+ -+.=+.+.|+..|.. .+|.|+-.|.
T Consensus 254 WMFnklD~N~D-l~Ld~sEl~~I~ldk----------nE~CikpFfnsCD~~------kDg~iS~~EW 304 (434)
T KOG3555|consen 254 WMFNKLDTNYD-LLLDQSELRAIELDK----------NEACIKPFFNSCDTY------KDGSISTNEW 304 (434)
T ss_pred hhhhccccccc-cccCHHHhhhhhccC----------chhHHHHHHhhhccc------ccCccccchh
Confidence 3699 99 999 999999999943211 245677889999888 8999997775
No 113
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=61.02 E-value=7.3 Score=37.21 Aligned_cols=66 Identities=14% Similarity=0.159 Sum_probs=43.2
Q ss_pred HHhhhCCCCCCcccHHHHHHHHhc-cCcccCCCCCCCCCCCchHH-------HHHHHHHhccCCCcccCHHHHHHHH
Q 025397 131 LFADLDTEDEGKVCKGEIQNALGH-MGVEFGVPPFSECRSTEFPQ-------LNDILKKHGAEGEEELGQAQFTELL 199 (253)
Q Consensus 131 ~F~~lD~D~dG~LS~~ELr~aL~~-l~v~~GlPp~~~~~~~~~~~-------~~~if~e~D~d~dg~Vd~eEF~~lm 199 (253)
.|.-.|.++||.+...||...|.. +-.- -.|....+.| ... -+-+++++|.|.|.-|+.+||+.--
T Consensus 249 FF~LHD~NsDGfldeqELEaLFtkELEKv--YdpkNeeDDM-~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t 322 (442)
T KOG3866|consen 249 FFALHDLNSDGFLDEQELEALFTKELEKV--YDPKNEEDDM-KEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDT 322 (442)
T ss_pred heeeeccCCcccccHHHHHHHHHHHHHHh--cCCCCcchHH-HHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhh
Confidence 477779999999999999966644 2211 1222211111 000 1337899999999999999998644
No 114
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=57.44 E-value=8.1 Score=37.13 Aligned_cols=65 Identities=14% Similarity=0.182 Sum_probs=50.6
Q ss_pred HHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhC
Q 025397 57 LKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLD 136 (253)
Q Consensus 57 ~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD 136 (253)
++.=-|+.+|.| .++.|++.|.+- .+.+|.......++..+.|++-|
T Consensus 334 vv~w~F~qLdkN------~nn~i~rrEwKp---------------------------FK~~l~k~s~~rkC~rk~~~yCD 380 (421)
T KOG4578|consen 334 VVHWYFNQLDKN------SNNDIERREWKP---------------------------FKRVLLKKSKPRKCSRKFFKYCD 380 (421)
T ss_pred eeeeeeeeeccc------ccCccchhhcch---------------------------HHHHHHhhccHHHHhhhcchhcc
Confidence 444557888888 899999766543 24455555567788999999999
Q ss_pred CCCCCcccHHHHHHHHhc
Q 025397 137 TEDEGKVCKGEIQNALGH 154 (253)
Q Consensus 137 ~D~dG~LS~~ELr~aL~~ 154 (253)
.|+|-+||..|++.-|+.
T Consensus 381 lNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 381 LNKDKKISLDEWRGCLGV 398 (421)
T ss_pred cCCCceecHHHHhhhhcc
Confidence 999999999999988754
No 115
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=57.19 E-value=10 Score=28.09 Aligned_cols=26 Identities=19% Similarity=0.314 Sum_probs=22.2
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHhc
Q 025397 128 AENLFADLDTEDEGKVCKGEIQNALGH 154 (253)
Q Consensus 128 v~~~F~~lD~D~dG~LS~~ELr~aL~~ 154 (253)
+..+|+.+ .++.+.|+..+||.+|-.
T Consensus 8 v~~aFr~l-A~~KpyVT~~dLr~~l~p 33 (69)
T PF08726_consen 8 VEEAFRAL-AGGKPYVTEEDLRRSLTP 33 (69)
T ss_dssp HHHHHHHH-CTSSSCEEHHHHHHHS-C
T ss_pred HHHHHHHH-HcCCCcccHHHHHHHcCc
Confidence 88999999 777899999999988643
No 116
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=57.15 E-value=18 Score=38.54 Aligned_cols=158 Identities=13% Similarity=0.141 Sum_probs=105.2
Q ss_pred hhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHH
Q 025397 17 LSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYIT 93 (253)
Q Consensus 17 l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~ 93 (253)
|-.+|. +| ..+ |.+++++-.+ ++ ..|+|+.+.-.+-.-.|.. +.|.+++.+|..-||.+-.
T Consensus 13 ~~~~~~~~d~~~~-G~i~g~~a~~f~~---------~s~L~~qvl~qiws~~d~~------~~g~l~~q~f~~~lrlva~ 76 (847)
T KOG0998|consen 13 FDQYFKSADPQGD-GRITGAEAVAFLS---------KSGLPDQVLGQIWSLADSS------GKGFLNRQGFYAALRLVAQ 76 (847)
T ss_pred HHHhhhccCcccC-CcccHHHhhhhhh---------ccccchhhhhccccccccc------cCCccccccccccchHhhh
Confidence 336789 99 888 9999999998 54 4457888887777776666 6789999999998888766
Q ss_pred HHHhHhCCCCeEEE------------------Eec-----ChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHH
Q 025397 94 AIADELKDDPLVVC------------------VLD-----GNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQN 150 (253)
Q Consensus 94 ~iA~~L~~~Pi~v~------------------v~d-----Gs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~ 150 (253)
+=...--..+.+.- +-. +..+--+=-++. ..-+.+|+.+... +|.++-+-.++
T Consensus 77 aq~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~s~~~~~p~~~~qe~---aky~q~f~s~~p~-~g~~sg~~~~p 152 (847)
T KOG0998|consen 77 AQSGRELSAKKVLPASAVPPPPKISHDTSPPSRPSSSTSAAPFVPAITPQEQ---AKYDQIFRSLSPS-NGLLSGDKAKP 152 (847)
T ss_pred hhcccCcCccccccccCCCCCCccCccCCCcccCCCCCCCcccCCCCCHHHH---HHHHHHHhccCCC-CCccccchhhh
Confidence 54332222222100 111 111111111121 2345569999886 89999999999
Q ss_pred HHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHHHH
Q 025397 151 ALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIV 207 (253)
Q Consensus 151 aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~~A 207 (253)
+|.+ .++|. .+...+-.-.|.|.+|.++..||.--|.-+...|-
T Consensus 153 il~~----s~Lp~---------~~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~~~l~ 196 (847)
T KOG0998|consen 153 ILLN----SKLPS---------DVLGRIWELSDIDKDGNLDRDEFAVAMHLINDLLN 196 (847)
T ss_pred hhhc----CCCCh---------hhhccccccccccccCCCChhhhhhhhhHHHHHhh
Confidence 9987 44542 23334445689999999999999998887765543
No 117
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=57.14 E-value=16 Score=27.72 Aligned_cols=54 Identities=20% Similarity=0.261 Sum_probs=36.5
Q ss_pred CCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHH
Q 025397 140 EGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 202 (253)
Q Consensus 140 dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~i 202 (253)
||.+|..|.+.+-.-+...+|+++. ....++..+....+...+..+|...++..
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~---------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 66 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAE---------EAAELLAEAEALEEEAPDLYEFTSLIKEH 66 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHH---------HHHHHHHHHHHHHHhCCCHHHHHHHHHHh
Confidence 6899999998555445555677632 34566666655566667888888877653
No 118
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=56.31 E-value=55 Score=28.55 Aligned_cols=75 Identities=12% Similarity=0.178 Sum_probs=52.2
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHhccCc------------ccCCCCC-CCCCCC-----------------------
Q 025397 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGV------------EFGVPPF-SECRST----------------------- 170 (253)
Q Consensus 127 ~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v------------~~GlPp~-~~~~~~----------------------- 170 (253)
.+.+--..+|.|+||.|..-|-=..+..+|- +.++.++ ..++-.
T Consensus 8 ~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~Y 87 (174)
T PF05042_consen 8 VLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGAY 87 (174)
T ss_pred HHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCcccc
Confidence 4667778899999999999998777777652 2233221 111000
Q ss_pred ------chHHHHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 171 ------EFPQLNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 171 ------~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
...-+++||+.++..+.+.++..|...|++.
T Consensus 88 D~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~ 124 (174)
T PF05042_consen 88 DTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKG 124 (174)
T ss_pred ccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHh
Confidence 0123678999999888889999999999884
No 119
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=53.26 E-value=23 Score=34.15 Aligned_cols=99 Identities=16% Similarity=0.194 Sum_probs=62.3
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHHH
Q 025397 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDI 206 (253)
Q Consensus 127 ~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~~ 206 (253)
.+...|.-||.+++|.+.. |.-+..+++-.| ||.. ..++.=.|+.|+.+.||-+..++|--.++ +
T Consensus 260 ~l~~~f~LFde~~tg~~D~---re~v~~lavlc~-p~~t------~~iiq~afk~f~v~eDg~~ge~~ls~ilq-----~ 324 (412)
T KOG4666|consen 260 KLAPTFMLFDEGTTGNGDY---RETVKTLAVLCG-PPVT------PVIIQYAFKRFSVAEDGISGEHILSLILQ-----V 324 (412)
T ss_pred hhhhhhheecCCCCCcccH---HHHhhhheeeeC-CCCc------HHHHHHHHHhcccccccccchHHHHHHHH-----H
Confidence 4789999999999999854 445555555444 3332 34678889999999999999987765554 3
Q ss_pred HHHhccCCeEEEe-cccccc-----ChhHHHHhhchhhhh
Q 025397 207 VDALADKHIIIIP-NIKIID-----GSKLRMVIQHLVFLC 240 (253)
Q Consensus 207 A~~L~~~PV~v~~-~~~~~d-----Gs~l~~~l~~~~~~~ 240 (253)
+.|+...-|-+.- ++.--| =|..|++..-..+++
T Consensus 325 ~lgv~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~~~p~~a 364 (412)
T KOG4666|consen 325 VLGVEVLRVPVLFPSIEQKDDPKIYASNFRKFAATEPNLA 364 (412)
T ss_pred hcCcceeeccccchhhhcccCcceeHHHHHHHHHhCchhh
Confidence 4444443333221 011111 256788877664443
No 120
>COG5502 Uncharacterized conserved protein [Function unknown]
Probab=48.90 E-value=1.4e+02 Score=25.14 Aligned_cols=99 Identities=11% Similarity=0.194 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCccc
Q 025397 80 DRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEF 159 (253)
Q Consensus 80 ~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~ 159 (253)
|..+....++-++..|.+.|-- .+...-..++-+.+..+|..=...+-+++ .--++.+|.+..-..
T Consensus 24 s~~~A~~~~~avL~tlRdrL~~-------------eea~~~aaqLP~~ir~~~~~~p~~~~~~~-~~s~~dFl~Rv~~~~ 89 (135)
T COG5502 24 SRNDAYRITRAVLRTLRDRLPG-------------EEAADFAAQLPMEIRDILVDGPDLGPPKL-PFSLDDFLTRVANKF 89 (135)
T ss_pred CHHHHHHHHHHHHHHHHHHcCh-------------hHHHHHHHhCCHHHHHHHhcCCcCCCCCC-cccHHHHHHHHHHcc
Confidence 5667778888888888888876 44444444455678888876322222222 234666888887788
Q ss_pred CCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHH
Q 025397 160 GVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLR 200 (253)
Q Consensus 160 GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk 200 (253)
|+.|.-++. ..+..+|+-.... ||.+|+.++..
T Consensus 90 g~~~~vd~e----~a~~AVf~vL~r~----Is~gei~~v~s 122 (135)
T COG5502 90 GLEPPVDPE----HAIAAVFAVLKRH----ISPGEIDKVRS 122 (135)
T ss_pred CCCCCCCHH----HHHHHHHHHHHHh----CCHHHHHHHHH
Confidence 886554332 3456777665443 78888776554
No 121
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=47.63 E-value=36 Score=29.84 Aligned_cols=38 Identities=24% Similarity=0.394 Sum_probs=34.2
Q ss_pred cccCHHHHHHHHHHHHHHHHhHhC-CCCeEEEEecChhH
Q 025397 77 KEFDRDHASKLASDYITAIADELK-DDPLVVCVLDGNML 114 (253)
Q Consensus 77 g~i~~~eF~~~l~~~l~~iA~~L~-~~Pi~v~v~dGs~l 114 (253)
=-||++|..+..+++-..|+...+ .+|++|.++.||..
T Consensus 10 vLisee~I~~ri~ela~~I~~~y~g~~~~vv~iLkGs~~ 48 (178)
T COG0634 10 VLISEEQIKARIKELAAQITEDYGGKDPLVVGVLKGSFP 48 (178)
T ss_pred EeeCHHHHHHHHHHHHHHHHHhhCCCceEEEEEcccchh
Confidence 357999999999999999999999 88999999999964
No 122
>PF14425 Imm3: Immunity protein Imm3
Probab=47.40 E-value=56 Score=26.73 Aligned_cols=92 Identities=16% Similarity=0.266 Sum_probs=59.1
Q ss_pred HhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccC-CCcccCHHH
Q 025397 116 LFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAE-GEEELGQAQ 194 (253)
Q Consensus 116 ~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d-~dg~Vd~eE 194 (253)
+++....-....+.++|..++ +.|..-+-.+--+++.+-+.+..-+.+ ....+-..+++++.. -.+.++++|
T Consensus 19 e~~~~d~s~~eaiar~~~eye--~lg~~EkiIv~~~igEi~l~~~~i~~~-----~~~~i~~~L~~~~~~~~~~eLt~eE 91 (117)
T PF14425_consen 19 EYLNEDRSYSEAIARTFDEYE--NLGETEKIIVDTAIGEILLSHNKIFVG-----QKEGITKRLSQFDFEEVKGELTQEE 91 (117)
T ss_pred HHHHccCCHHHHHHHHHHHHH--ccCcHHHHHHHHHHHHHHhhcchHHhh-----HHHHHHHHHHhcChHHHHhHhhHHH
Confidence 344444446667888899986 568887777777887766654321111 111233345666543 347789999
Q ss_pred HHHHHHHHHHHHHHHhccCCe
Q 025397 195 FTELLRQVLQDIVDALADKHI 215 (253)
Q Consensus 195 F~~lmk~iL~~~A~~L~~~PV 215 (253)
+..+++.+ ..|=.+|+.-||
T Consensus 92 ~~dL~~R~-nkVL~~l~~~~i 111 (117)
T PF14425_consen 92 KEDLSQRI-NKVLDGLEKVEI 111 (117)
T ss_pred HHHHHHHH-HHHHHHHhcCcc
Confidence 99998876 456678888886
No 123
>PRK10598 lipoprotein; Provisional
Probab=45.61 E-value=33 Score=30.17 Aligned_cols=44 Identities=5% Similarity=0.098 Sum_probs=32.1
Q ss_pred cCHHHHHHHHHH----HHHHHHHHhccCCeEEEeccccccChhHHHHh
Q 025397 190 LGQAQFTELLRQ----VLQDIVDALADKHIIIIPNIKIIDGSKLRMVI 233 (253)
Q Consensus 190 Vd~eEF~~lmk~----iL~~~A~~L~~~PV~v~~~~~~~dGs~l~~~l 233 (253)
++.+.|...++. ++..++.-|..+||++..++|....+.++++.
T Consensus 123 v~Pe~~~~~l~~l~p~l~~~L~~~l~~~PVY~L~d~~~~~eal~kk~~ 170 (186)
T PRK10598 123 VQPEKMQTVMQTLLPYLNQSLRSYFNQQPAYVLREDKSKAEALAKKLA 170 (186)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHhccCCeEEECCCCCHHHHHHHhcc
Confidence 455666655555 78888888899999999877766666666654
No 124
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=45.47 E-value=30 Score=37.15 Aligned_cols=82 Identities=15% Similarity=0.133 Sum_probs=60.0
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHH------
Q 025397 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLR------ 200 (253)
Q Consensus 127 ~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk------ 200 (253)
.+.+.|..+++.+.|.++.++++.+|..+|...+= .++ ....|-.++...|.++-|.|+..+|..-|.
T Consensus 748 ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~-----ee~-~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~l 821 (890)
T KOG0035|consen 748 ELRALENEQDKIDGGAASPEELLRCLMSLGYNTEE-----EEQ-GIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYEDL 821 (890)
T ss_pred HHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccch-----hHH-HHHHHHHHHhccCcccccceeHHHHHhHhhhhhhhh
Confidence 37899999999999999999999999998754321 011 122344456778888889999999998776
Q ss_pred ----HHHHHHHHHhccCC
Q 025397 201 ----QVLQDIVDALADKH 214 (253)
Q Consensus 201 ----~iL~~~A~~L~~~P 214 (253)
++++++-+--+.++
T Consensus 822 ~~~~r~i~s~~d~~ktk~ 839 (890)
T KOG0035|consen 822 DTELRAILAFEDWAKTKA 839 (890)
T ss_pred cHHHHHHHHHHHHHcchh
Confidence 45666666555555
No 125
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=44.92 E-value=1.2e+02 Score=24.86 Aligned_cols=86 Identities=13% Similarity=0.027 Sum_probs=56.8
Q ss_pred ChHHHHHHHHhhcCCCCccccc-ccccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHH
Q 025397 54 PQNLKSTALKHISGSDDDVTFR-IKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLF 132 (253)
Q Consensus 54 p~~~~~~~l~~~d~~~~~~~~~-~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F 132 (253)
+=..+.++|++..-+. . +..++-.+....|.++-.+++.++...+ .+ ... .=+.+-+.++.=++
T Consensus 39 ~l~~v~~~f~~~~l~~-----~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~-~i--------~~~-~v~~a~~L~ln~Ll 103 (127)
T PF09068_consen 39 DLSNVIEAFREHGLNQ-----SNDSSLSVSQLETLLSSIYEFLNKRLPTLH-QI--------PSR-PVDLAVDLLLNWLL 103 (127)
T ss_dssp -HHHHHHHHHHTT--------T-TSEEEHHHHHHHHHHHHHHHHHHSTTS---H--------H------HHHHHHHHHHH
T ss_pred eHHHHHHHHHHcCCCc-----ccCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CC--------Cch-hHHHHHHHHHHHHH
Confidence 4456778888876662 2 5569999999999999999998888722 10 000 00234566677788
Q ss_pred hhhCCCCCCcccHHHHHHHHhc
Q 025397 133 ADLDTEDEGKVCKGEIQNALGH 154 (253)
Q Consensus 133 ~~lD~D~dG~LS~~ELr~aL~~ 154 (253)
..+|.+++|+|+.-.++.+|--
T Consensus 104 ~vyD~~rtG~I~vls~KvaL~~ 125 (127)
T PF09068_consen 104 NVYDSQRTGKIRVLSFKVALIT 125 (127)
T ss_dssp HHH-TT--SEEEHHHHHHHHHH
T ss_pred HHhCCCCCCeeehhHHHHHHHH
Confidence 8899999999999999988753
No 126
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=43.30 E-value=22 Score=29.75 Aligned_cols=57 Identities=9% Similarity=0.141 Sum_probs=34.7
Q ss_pred ccccHHHHHHHHHccccccccCCCCChHHHHHHHHhhcCCCCccc-ccccccCHHHHHHHHHHHHH
Q 025397 29 STVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVT-FRIKEFDRDHASKLASDYIT 93 (253)
Q Consensus 29 G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~-~~~g~i~~~eF~~~l~~~l~ 93 (253)
++||+.|+.+|++... -...-+..+++.|..++.-.. -..+.|+-+-|+.=|+-|++
T Consensus 6 ~~lsp~eF~qLq~y~e--------ys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe 63 (138)
T PF14513_consen 6 VSLSPEEFAQLQKYSE--------YSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLE 63 (138)
T ss_dssp S-S-HHHHHHHHHHHH--------H----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT
T ss_pred eccCHHHHHHHHHHHH--------HHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHc
Confidence 7899999999887655 224567778999966630000 03669999999997777765
No 127
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=43.15 E-value=32 Score=39.20 Aligned_cols=89 Identities=12% Similarity=0.292 Sum_probs=62.1
Q ss_pred HHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHHHHHH
Q 025397 130 NLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDA 209 (253)
Q Consensus 130 ~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~~A~~ 209 (253)
..|++.|.|+.|.||+.+..+|++...- .. -..++-+++-..+|.+...+|++|..-+.+-...
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~k~------yt------qse~dfllscae~dend~~~y~dfv~rfhepakd---- 4124 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGHKH------YT------QSEIDFLLSCAEADENDMFDYEDFVDRFHEPAKD---- 4124 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhcccc------ch------hHHHHHHHHhhccCccccccHHHHHHHhcCchhh----
Confidence 4699999999999999999999987321 01 1134557788888999999999999887643222
Q ss_pred hccCCeEE--EeccccccChhHHHHhh
Q 025397 210 LADKHIII--IPNIKIIDGSKLRMVIQ 234 (253)
Q Consensus 210 L~~~PV~v--~~~~~~~dGs~l~~~l~ 234 (253)
++.+--+. -.+|..-+.|.|+-+|+
T Consensus 4125 igfnvavlltnlsehmpndsrlk~~ld 4151 (5019)
T KOG2243|consen 4125 IGFNVAVLLTNLSEHMPNDSRLKCFLD 4151 (5019)
T ss_pred cCcchhhhhhhhHhhCCCchhHHHHHh
Confidence 22221111 13566778888888875
No 128
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=41.82 E-value=29 Score=25.67 Aligned_cols=28 Identities=18% Similarity=0.396 Sum_probs=21.3
Q ss_pred HHHHHHHHhccCCCcccCHHHHHHHHHHHHH
Q 025397 174 QLNDILKKHGAEGEEELGQAQFTELLRQVLQ 204 (253)
Q Consensus 174 ~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~ 204 (253)
.+...++++ ..++|+.+||...||.|.+
T Consensus 29 ~l~~~Y~~~---k~~kIsR~~fvr~lR~IVG 56 (70)
T PF12174_consen 29 LLQKHYEEF---KKKKISREEFVRKLRQIVG 56 (70)
T ss_pred HHHHHHHHH---HHCCCCHHHHHHHHHHHHH
Confidence 344444444 7889999999999998865
No 129
>cd08030 LA_like_plant La-motif domain of plant proteins similar to the La autoantigen. This domain is found in plant proteins related to the La autoantigen. A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Probab=41.12 E-value=55 Score=25.48 Aligned_cols=48 Identities=15% Similarity=0.309 Sum_probs=35.2
Q ss_pred HHhccCCCcccCHHHHHH--HHHHH---------------HHHHHHHhccCCeEEEeccccccChhHHH
Q 025397 180 KKHGAEGEEELGQAQFTE--LLRQV---------------LQDIVDALADKHIIIIPNIKIIDGSKLRM 231 (253)
Q Consensus 180 ~e~D~d~dg~Vd~eEF~~--lmk~i---------------L~~~A~~L~~~PV~v~~~~~~~dGs~l~~ 231 (253)
+.+..+.+|-|.-+.+.. -|+.+ +..+|+.|+.++++.+. .||..+||
T Consensus 26 ~~~~~~~dG~V~i~~i~~F~rmk~l~~~~~~~~~~~~~~~~~~I~~ALk~S~~levs----eD~~~VRR 90 (90)
T cd08030 26 EEVEEDPDGMVSLALICSFSRMRSLLGLGGGKPEDVPEDTLKAVAEALRTSTLLKVS----EDGKRVGR 90 (90)
T ss_pred HHhccCCCCCEehHHHhcChHHHHHhhcccccccccchhHHHHHHHHHccCCEEEEc----CCCCccCC
Confidence 335667788887666553 23333 56899999999999998 89988775
No 130
>PF11061 DUF2862: Protein of unknown function (DUF2862); InterPro: IPR021291 This family of proteins has no known function.
Probab=39.46 E-value=24 Score=25.92 Aligned_cols=33 Identities=30% Similarity=0.534 Sum_probs=29.0
Q ss_pred HHHHHHHHHhccCCeEEEeccccccChhHHHHh
Q 025397 201 QVLQDIVDALADKHIIIIPNIKIIDGSKLRMVI 233 (253)
Q Consensus 201 ~iL~~~A~~L~~~PV~v~~~~~~~dGs~l~~~l 233 (253)
.+-..+++.|+.+|+-.+..-|+-||+++.-.|
T Consensus 15 Ri~~~l~~~l~~~~~g~I~~fKmtDG~giG~vv 47 (64)
T PF11061_consen 15 RIPKELVDKLGKNPIGTIKGFKMTDGSGIGVVV 47 (64)
T ss_pred hccHHHHHHhccCCcEEEEEEEEecCCcEEEEE
Confidence 345679999999999999999999999987666
No 131
>PRK15337 type III secretion system protein InvA; Provisional
Probab=39.45 E-value=2.1e+02 Score=30.15 Aligned_cols=58 Identities=14% Similarity=0.268 Sum_probs=33.0
Q ss_pred hHHHHHHHHH-hccCCCc---ccCHHHHHHHHHHHHHHHHHH--hccCCeEEEeccccccChhHHHHhhch
Q 025397 172 FPQLNDILKK-HGAEGEE---ELGQAQFTELLRQVLQDIVDA--LADKHIIIIPNIKIIDGSKLRMVIQHL 236 (253)
Q Consensus 172 ~~~~~~if~e-~D~d~dg---~Vd~eEF~~lmk~iL~~~A~~--L~~~PV~v~~~~~~~dGs~l~~~l~~~ 236 (253)
+.-+++.+.+ +-....| .++.+...++++++-..+... -+..||++.+ ..+|+++++-
T Consensus 595 ~~~~E~~l~~~i~~~~~g~~~~l~P~~~~~l~~~v~~~~~~~~~~g~~pvll~s-------~~iR~~lr~l 658 (686)
T PRK15337 595 SAEVEDAIRKGIRQTSGGTFLNLDPAESENLMDLLTLALDDLGIAHRDIVLLVS-------VDIRRFVKKL 658 (686)
T ss_pred CHHHHHHHHHHHhcccCCCccCcCHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-------HHHHHHHHHH
Confidence 4456666644 2222233 267776666666655444432 4567888887 5677777653
No 132
>PF09987 DUF2226: Uncharacterized protein conserved in archaea (DUF2226); InterPro: IPR019249 This entry includes hypothetical proteins of unknown function.
Probab=39.39 E-value=1.6e+02 Score=27.84 Aligned_cols=89 Identities=17% Similarity=0.337 Sum_probs=55.5
Q ss_pred HHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHH
Q 025397 124 FTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 203 (253)
Q Consensus 124 f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL 203 (253)
|.+.....+.+.-.+.+ .|||+||-+- +|+-+++ +.++++++.++=.-..-.+..++|.+...+++
T Consensus 160 ~gk~A~e~~eEii~E~~-slsReeLLKk-------lgIk~p~------ee~Ie~lle~~f~ps~~el~~~~~e~~~~~i~ 225 (297)
T PF09987_consen 160 FGKSAKEEFEEIIKEEN-SLSREELLKK-------LGIKEPD------EEEIENLLEDYFEPSKEELIEEDLEEIKNKII 225 (297)
T ss_pred cchhHHHHHHHHhcCCc-cCCHHHHHHH-------hCCCCCC------HHHHHHHHHHHHhhccccccchhHHHHHHHHH
Confidence 44445556666655544 4999998754 3554444 45788888885333444456777887777777
Q ss_pred HHHHHHhccCC----eEEEeccccccC
Q 025397 204 QDIVDALADKH----IIIIPNIKIIDG 226 (253)
Q Consensus 204 ~~~A~~L~~~P----V~v~~~~~~~dG 226 (253)
..+-..|.+.| +.+-...+..+|
T Consensus 226 ~~i~~~l~~~~~~~d~~v~l~i~~~~~ 252 (297)
T PF09987_consen 226 EKIKNSLKNILGIQDVLVDLKIEYEEG 252 (297)
T ss_pred HHHHHHHhcCCCcceeEEEEEeecccc
Confidence 77777766655 444444444444
No 133
>cd07311 terB_like_1 tellurium resistance terB-like protein, subgroup 1. This family includes several uncharacterized bacterial proteins. The prototype of this CD is tellurite resistance protein from Nostoc punctiforme that belongs to COG3793. Its precise biological function and its mechanism responsible for tellurium resistance still remains rather poorly understood.
Probab=38.78 E-value=2.1e+02 Score=24.01 Aligned_cols=34 Identities=6% Similarity=-0.110 Sum_probs=25.7
Q ss_pred CCCCccccHHHHHHHHHccccccccCCCCChHHHHHHHHh
Q 025397 25 TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKH 64 (253)
Q Consensus 25 d~d~G~Ls~~El~~l~~~~~~~~~~~~~lp~~~~~~~l~~ 64 (253)
-.| |.+|..|+..+..+.. .+++++.....+++.
T Consensus 35 kAD-G~Vse~Ei~~~~~~m~-----~~~L~~e~~~~aie~ 68 (150)
T cd07311 35 KGD-GVISPEERDWAIGYAA-----ARGGDADMVEELKEY 68 (150)
T ss_pred HcC-CCCCHHHHHHHHHHHH-----HcCCCHHHHHHHHHh
Confidence 557 9999999988776666 446777777777777
No 134
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=38.48 E-value=35 Score=21.07 Aligned_cols=18 Identities=11% Similarity=0.370 Sum_probs=15.3
Q ss_pred CCcccCHHHHHHHHHHHH
Q 025397 186 GEEELGQAQFTELLRQVL 203 (253)
Q Consensus 186 ~dg~Vd~eEF~~lmk~iL 203 (253)
..|.||.+||.+.-+++|
T Consensus 13 ~~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 13 DKGEISEEEYEQKKARLL 30 (31)
T ss_pred HcCCCCHHHHHHHHHHHh
Confidence 368899999999888876
No 135
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=37.97 E-value=1.1e+02 Score=28.04 Aligned_cols=25 Identities=16% Similarity=0.539 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhccCCeEEEecccc
Q 025397 199 LRQVLQDIVDALADKHIIIIPNIKI 223 (253)
Q Consensus 199 mk~iL~~~A~~L~~~PV~v~~~~~~ 223 (253)
|-++|..+|+.|+..-|+|.|++|.
T Consensus 174 iMk~Lrrla~el~KtiviVlHDINf 198 (252)
T COG4604 174 IMKILRRLADELGKTIVVVLHDINF 198 (252)
T ss_pred HHHHHHHHHHHhCCeEEEEEecccH
Confidence 4478999999999999999998874
No 136
>cd07176 terB tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.
Probab=37.48 E-value=47 Score=25.03 Aligned_cols=34 Identities=15% Similarity=0.041 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccC
Q 025397 124 FTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFG 160 (253)
Q Consensus 124 f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~G 160 (253)
-...+.-++.--..| |.++..|.+ .|.+++..+|
T Consensus 77 r~~~~~~~~~ia~aD--G~~~~~E~~-~L~~l~~~Lg 110 (111)
T cd07176 77 RETAFAVAVDIAAAD--GEVDPEERA-VLEKLYRALG 110 (111)
T ss_pred HHHHHHHHHHHHHcc--CCCCHHHHH-HHHHHHHHhC
Confidence 344455556655554 788888877 7777665554
No 137
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=37.20 E-value=59 Score=25.26 Aligned_cols=39 Identities=21% Similarity=0.277 Sum_probs=28.5
Q ss_pred HHHHHHHHhccCCCcccCHHHHHHHHHHHHHHHHHHhccCC
Q 025397 174 QLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKH 214 (253)
Q Consensus 174 ~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~~A~~L~~~P 214 (253)
.|.-+|+.+ +|.+|.+++..|..+++++++ +-..+++.|
T Consensus 4 KyRylFsli-sd~~g~~~~~~l~~lL~d~lq-ip~~vgE~~ 42 (90)
T PF09069_consen 4 KYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQ-IPRAVGEGP 42 (90)
T ss_dssp HHHHHHHHH-S-TTS-B-HHHHHHHHHHHHH-HHHHTT-GG
T ss_pred HHHHHHHHH-cCCCCCCcHHHHHHHHHHHHH-HHHHhCccc
Confidence 578899999 889999999999999999875 455566655
No 138
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=36.07 E-value=1.8e+02 Score=24.37 Aligned_cols=67 Identities=15% Similarity=0.212 Sum_probs=40.4
Q ss_pred HHHhhh---CCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHH
Q 025397 130 NLFADL---DTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 204 (253)
Q Consensus 130 ~~F~~l---D~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~ 204 (253)
.+|..+ -......++-.-..+.+...++= +..- ....++-||..+-......|++++|+..|..|..
T Consensus 3 ~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~---d~k~-----t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~ 72 (154)
T PF05517_consen 3 AVFKAFASFGKKNGTEMDSKNFAKLCKDCGII---DKKL-----TSTDVDIIFSKVKAKGARKITFEQFLEALAELAE 72 (154)
T ss_dssp HHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS-----SSS------HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCccccccHHHHHHHHHHcCCC---CCCC-----chHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHH
Confidence 444444 33334467777777777775541 1111 1345778899986666777999999999887643
No 139
>cd07176 terB tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.
Probab=35.51 E-value=46 Score=25.06 Aligned_cols=57 Identities=19% Similarity=0.131 Sum_probs=32.5
Q ss_pred CCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHH
Q 025397 140 EGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 203 (253)
Q Consensus 140 dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL 203 (253)
||.++.+|++....-+....++++.. .....++|+..-.+. ...+..++...++..+
T Consensus 16 DG~v~~~E~~~i~~~l~~~~~l~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 72 (111)
T cd07176 16 DGDIDDAELQAIEALLRSLPVLSGFD------RERLIALLDKLLALL-RPEGLAALLKAAAKLL 72 (111)
T ss_pred ccCCCHHHHHHHHHHHHcCccccCCC------HHHHHHHHHHHHHHH-HHhhHHHHHHHHHHhC
Confidence 68999999997766666555665444 223445554432221 2334566666666544
No 140
>PRK07090 class II aldolase/adducin domain protein; Provisional
Probab=35.04 E-value=2.1e+02 Score=26.07 Aligned_cols=86 Identities=9% Similarity=-0.023 Sum_probs=60.7
Q ss_pred HHHHHhHhCCCCeEEE-----EecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCC
Q 025397 92 ITAIADELKDDPLVVC-----VLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSE 166 (253)
Q Consensus 92 l~~iA~~L~~~Pi~v~-----v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~ 166 (253)
-.++|+.|++.++++. +.=|.+|.+++..-..++..+.-.+...-...--.|+.++++.. .+. +|.|-..
T Consensus 166 a~~va~~l~~~~avLL~nHGvi~~G~~l~eA~~~~~~LE~~A~i~l~a~~~G~~~~l~~e~~~~~-~~~---~~~~~~~- 240 (260)
T PRK07090 166 GEIISAALGDKRAILLSHHGQLVAGKSIEEACVLALLIERAARLQLLAMAAGPIKPIPPELAREA-HDW---ISTPKRS- 240 (260)
T ss_pred HHHHHHHhccCCEEEECCCCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCHHHHHHH-HHh---hcCcchh-
Confidence 5678899999998877 55788999999888888888888887776544456888888866 332 2334122
Q ss_pred CCCCchHHHHHHHHHhccCCC
Q 025397 167 CRSTEFPQLNDILKKHGAEGE 187 (253)
Q Consensus 167 ~~~~~~~~~~~if~e~D~d~d 187 (253)
+..|+.+..+++.+.-
T Consensus 241 -----~~~~~~~~~~~~~~~~ 256 (260)
T PRK07090 241 -----AATFAYYARRALRRHP 256 (260)
T ss_pred -----HhhHHHHHHHHHhhCc
Confidence 3357777777766543
No 141
>PRK10236 hypothetical protein; Provisional
Probab=33.22 E-value=3.8e+02 Score=24.53 Aligned_cols=90 Identities=11% Similarity=0.099 Sum_probs=50.3
Q ss_pred hHHHHHHHHhhcCCCCcccccccccC-HHHHHH------HHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCc-hhHHH
Q 025397 55 QNLKSTALKHISGSDDDVTFRIKEFD-RDHASK------LASDYITAIADELKDDPLVVCVLDGNMLKLFLGNE-DDFTM 126 (253)
Q Consensus 55 ~~~~~~~l~~~d~~~~~~~~~~g~i~-~~eF~~------~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e-~~f~~ 126 (253)
+..+..+..-+.+|.|+..-..++++ +++|+. ..+.|-+.||.+|.. +-|.++..+++.+ ..|..
T Consensus 19 ~edL~~Lv~~Lt~d~dG~~R~te~lt~~~~yk~~~~~~~~~~~yw~~Ia~elq~-------fGgnt~~n~lRG~Gv~Yre 91 (237)
T PRK10236 19 EEQLANFARLLTHNEKGKTRLSSVLMRNELFKSMEGHPEQHRRNWQLIAGELQH-------FGGDSIANKLRGHGKLYRA 91 (237)
T ss_pred HHHHHHHHHHHhcCCCCCEeehhhhcccHHHHhhcccchhHHHHHHHHHHHHHH-------hcchHHHHHHhcCCccHHH
Confidence 44556666666666211111122332 335544 577889999999876 5555555444432 24555
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHH
Q 025397 127 LAENLFADLDTEDEGKVCKGEIQNA 151 (253)
Q Consensus 127 ~v~~~F~~lD~D~dG~LS~~ELr~a 151 (253)
++..+=+.+..+-+.+.|..+|+..
T Consensus 92 IL~DVc~~LKV~y~~~~st~~iE~~ 116 (237)
T PRK10236 92 ILLDVSKRLKLKADKEMSTFEIEQQ 116 (237)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 6666666666666666666555543
No 142
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=32.19 E-value=52 Score=33.93 Aligned_cols=64 Identities=13% Similarity=0.086 Sum_probs=50.2
Q ss_pred hHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHH
Q 025397 13 QLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLAS 89 (253)
Q Consensus 13 ~l~~l~~~F~-LD-d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~ 89 (253)
+++-+..+|. || |.. |..+...++. +.+.++ + .|......++++.+.+ .+|.+...+|.+.++
T Consensus 591 ~~~~~~~rf~~lD~~k~-~~~~i~~v~~vlk~~~~-----~--~d~~~~~~~l~ea~~~------~~g~v~l~e~~q~~s 656 (680)
T KOG0042|consen 591 DFLRRKTRFAFLDADKK-AYQAIADVLKVLKSENV-----G--WDEDRLHEELQEADEN------LNGFVELREFLQLMS 656 (680)
T ss_pred HHHHHHHHHHhhcchHH-HHHHHHHHHHHHHHhcC-----C--CCHHHHHHHHHHHHHh------hcceeeHHHHHHHHH
Confidence 3444447899 99 566 9999988888 665554 4 7899999999999988 899999999988544
Q ss_pred H
Q 025397 90 D 90 (253)
Q Consensus 90 ~ 90 (253)
.
T Consensus 657 ~ 657 (680)
T KOG0042|consen 657 A 657 (680)
T ss_pred H
Confidence 3
No 143
>PRK03887 methylated-DNA--protein-cysteine methyltransferase; Provisional
Probab=31.72 E-value=3.1e+02 Score=24.00 Aligned_cols=107 Identities=14% Similarity=0.135 Sum_probs=61.6
Q ss_pred ccCHHHHHH-HHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccC
Q 025397 78 EFDRDHASK-LASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMG 156 (253)
Q Consensus 78 ~i~~~eF~~-~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~ 156 (253)
.+|..||.+ .++.+...+.++.-. -++.+.+..|...+.+.|...-.+-+.... | .
T Consensus 30 ~~~~~~~~~~~~~~~~~~l~~~f~~-------------a~l~~~~~~~~~~l~~~l~g~~~~~~~~~~-------l---~ 86 (175)
T PRK03887 30 SFDGEEFLRERISNLAEFLKKRGVK-------------VSLKERPSDYPELVFKVLIGKISNEEGLEE-------L---S 86 (175)
T ss_pred ecccHHHHHHHHHHHHHHHHHhCcC-------------ceecCCChhHHHHHHHHHcCCccccccCcc-------c---C
Confidence 456777755 555555555555444 344555666776666665544333221110 0 0
Q ss_pred cccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHHHHHHhccCCeE
Q 025397 157 VEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHII 216 (253)
Q Consensus 157 v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~~A~~L~~~PV~ 216 (253)
. .|++|.. ..+|+.+.+++- -....+|.+..+.+-.-..+|+.-|+.+|+-
T Consensus 87 ~-~g~T~Fq------~rV~~~Lv~~IP--~G~v~TYgqIA~~~G~aaRAVG~Al~~NP~~ 137 (175)
T PRK03887 87 F-EGLTPFE------RKVYEWLTKNVK--RGEVITYGELAKALNTSPRAVGGAMKRNPYP 137 (175)
T ss_pred c-CCCCHHH------HHHHHHHHHhCC--CCCCCcHHHHHHHHCchHHHHHHHHHhCCCC
Confidence 0 1223222 345555555552 2344689999988887789999999999985
No 144
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=30.09 E-value=2.3e+02 Score=26.05 Aligned_cols=71 Identities=20% Similarity=0.203 Sum_probs=54.3
Q ss_pred HHHHHHHhHhCCCCeEEE-----EecChhHHHhhcCchhHHHHHHHHHhhhCCCC-CCcccHHHHHHHHhccCcccCCCC
Q 025397 90 DYITAIADELKDDPLVVC-----VLDGNMLKLFLGNEDDFTMLAENLFADLDTED-EGKVCKGEIQNALGHMGVEFGVPP 163 (253)
Q Consensus 90 ~~l~~iA~~L~~~Pi~v~-----v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~-dG~LS~~ELr~aL~~l~v~~GlPp 163 (253)
++..+++..|++.+.++. +-=|.++.++...-..++..+.-.+...-..+ .-.|+.++++...++ +|+||
T Consensus 190 eLA~~v~~~l~~~~avLL~nHGvva~G~~l~eA~~~~E~lE~~A~i~~~a~~lg~~~~~L~~e~l~~~~~~----~~~~~ 265 (270)
T TIGR02624 190 EIGEATAEKMKEHRLVLWPHHGIFGAGPSLDETFGLIETAEKSAEVYTKVYSQGGVKQTISDEQLIALAKR----FGVTP 265 (270)
T ss_pred HHHHHHHHHhccCCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH----hCCCC
Confidence 577788888998888777 45799999999999889988888887654432 245899999877766 55665
Q ss_pred C
Q 025397 164 F 164 (253)
Q Consensus 164 ~ 164 (253)
.
T Consensus 266 ~ 266 (270)
T TIGR02624 266 K 266 (270)
T ss_pred c
Confidence 4
No 145
>cd08029 LA_like_fungal La-motif domain of fungal proteins similar to the La autoantigen. This domain is found in fungal proteins related to the La autoantigen. A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Probab=30.04 E-value=60 Score=24.33 Aligned_cols=47 Identities=15% Similarity=0.345 Sum_probs=34.7
Q ss_pred HHhccCCCcccCHHHHHHH-----HHHHHHHHHHHhccCCeEEEeccccccChhHHH
Q 025397 180 KKHGAEGEEELGQAQFTEL-----LRQVLQDIVDALADKHIIIIPNIKIIDGSKLRM 231 (253)
Q Consensus 180 ~e~D~d~dg~Vd~eEF~~l-----mk~iL~~~A~~L~~~PV~v~~~~~~~dGs~l~~ 231 (253)
+....+.+|-|..+.++.. +... ..++..|..+|++.+. .||..+||
T Consensus 25 ~~~~~~~~G~Vpl~~i~~F~rmk~l~~~-~~i~~Al~~S~~lev~----~d~~~VRR 76 (76)
T cd08029 25 TLTGGSNNGWVPIKTIASFKRMRRFQPL-EAVVEALRESELLEVS----EDGENVRR 76 (76)
T ss_pred HHhccCCCCcEehHHHhCchHHHHcCCH-HHHHHHHHhCCeEEEe----CCCCcccC
Confidence 3455678888887776632 2232 7889999999999998 88888775
No 146
>cd08032 LARP_7 La RNA-binding domain of La-related protein 7. LARP7 is a component of the 7SK snRNP, a key factor in the regulation of RNA polymerase II transcription. 7SK functionality is dependent on the presence of LARP7, which is thought to stabilize the 7SK RNA by interacting with its 3' end. The release of 7SK RNA from P-TEFb/HEXIM/7SK complexes activates the cyclin-dependent kinase P-TEFb, which in turn phosphorylates the C-terminal domain of RNA pol II and mediates a transition into productive transcription elongation.
Probab=28.02 E-value=73 Score=24.33 Aligned_cols=48 Identities=10% Similarity=0.262 Sum_probs=35.9
Q ss_pred HHhccCCCcccCHHHHHHH--HH---HHHHHHHHHhccCCeEEEeccccccChhHHH
Q 025397 180 KKHGAEGEEELGQAQFTEL--LR---QVLQDIVDALADKHIIIIPNIKIIDGSKLRM 231 (253)
Q Consensus 180 ~e~D~d~dg~Vd~eEF~~l--mk---~iL~~~A~~L~~~PV~v~~~~~~~dGs~l~~ 231 (253)
+..+.+.+|-|.-+.+... |+ .-...+++.|..+|++-+. .||..+||
T Consensus 30 ~~~~~~~dG~Vpl~~i~~F~rmk~lt~d~~~i~~Al~~S~~lev~----ed~~~VRR 82 (82)
T cd08032 30 EQIEKSRDGYIDISLLVSFNKMKKLTTDGKLIARALKNSSVVELN----LEGTRIRR 82 (82)
T ss_pred HHhcCCCCCCEeHHHHhcchHHHHHcCCHHHHHHHHhcCCEEEEc----CCCCccCC
Confidence 5577778899987776532 22 2256789999999999998 88887764
No 147
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=28.02 E-value=7.3e+02 Score=26.86 Aligned_cols=127 Identities=13% Similarity=0.096 Sum_probs=85.9
Q ss_pred CChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHH
Q 025397 53 LPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLF 132 (253)
Q Consensus 53 lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F 132 (253)
+|=.+...||++++-.+ ++.-.+......-|-....++-..++. +|.=+=..++++.=.+
T Consensus 417 v~ltl~l~if~~h~l~~-----~~e~m~~~~~i~~L~~~y~~l~e~~g~---------------~v~v~l~vD~~lN~ll 476 (966)
T KOG4286|consen 417 LSLSLALDALDQHNLKQ-----NDQPMDILQIINCLTTIYDRLEQEHGN---------------LVNVPLCVDMCLNWLL 476 (966)
T ss_pred ccHHHHHHHHHHhcccc-----cCcCCCHHHHHHHHHHHHHHHHHHccc---------------ccccchHHHHHHHHHH
Confidence 36678999999977772 344556666666444444555544444 4445556788888888
Q ss_pred hhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHHHHHHhcc
Q 025397 133 ADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALAD 212 (253)
Q Consensus 133 ~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~~A~~L~~ 212 (253)
.-+|..++|+|+.-+++.++-.+.. ++ ....|.-+|+.+...+..- ++..|-.++-+.. .+-++||+
T Consensus 477 NvyD~~R~g~irvls~ki~~i~lck---~~--------leek~~ylF~~vA~~~sq~-~q~~l~lLL~dli-qipr~lGE 543 (966)
T KOG4286|consen 477 NVYDTGRTGRIRVLSFKIGIISLCK---AH--------LEDKYRYLFKQVASSTSQC-DQRRLGLLLHDLI-QIPRQLGE 543 (966)
T ss_pred HhcccCCCcceEEeeehhhHHHHhc---ch--------hHHHHHHHHHHHcCchhhH-HHHHHHHHHHHHH-HHHHHHhH
Confidence 9999999999999999988877653 22 1336779999997665554 4888877766543 23344443
No 148
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.34 E-value=90 Score=26.55 Aligned_cols=44 Identities=18% Similarity=0.275 Sum_probs=31.3
Q ss_pred hcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCC
Q 025397 118 LGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFS 165 (253)
Q Consensus 118 v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~ 165 (253)
..||. ....+ -+|+-...| |.+|..|.+....-+.-.+|+|+..
T Consensus 24 adDP~-lAa~~-Llf~Vm~AD--G~v~~~E~~a~r~il~~~f~i~~~~ 67 (148)
T COG4103 24 ADDPR-LAAAA-LLFHVMEAD--GTVSESEREAFRAILKENFGIDGEE 67 (148)
T ss_pred CCCHH-HHHHH-HHHHHHhcc--cCcCHHHHHHHHHHHHHHcCCCHHH
Confidence 45555 55555 778888876 7899999985544455678998665
No 149
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=27.02 E-value=71 Score=23.63 Aligned_cols=19 Identities=11% Similarity=0.219 Sum_probs=16.7
Q ss_pred cccccCHHHHHHHHHHHHH
Q 025397 75 RIKEFDRDHASKLASDYIT 93 (253)
Q Consensus 75 ~~g~i~~~eF~~~l~~~l~ 93 (253)
+.++|+++||-..||.|.-
T Consensus 38 k~~kIsR~~fvr~lR~IVG 56 (70)
T PF12174_consen 38 KKKKISREEFVRKLRQIVG 56 (70)
T ss_pred HHCCCCHHHHHHHHHHHHH
Confidence 7889999999999998764
No 150
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=26.16 E-value=6.5e+02 Score=26.86 Aligned_cols=68 Identities=13% Similarity=0.216 Sum_probs=52.0
Q ss_pred hHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhh
Q 025397 55 QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFAD 134 (253)
Q Consensus 55 ~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~ 134 (253)
.+-...+|++.|.+ ++|.++..+....++.+.-.|-. .. +..+|++
T Consensus 135 ~~wi~~~~~~ad~~------~~~~~~~~~~~~~~~~~n~~l~~-----------------------~~-----~~~~f~e 180 (746)
T KOG0169|consen 135 EHWIHSIFQEADKN------KNGHMSFDEVLDLLKQLNVQLSE-----------------------SK-----ARRLFKE 180 (746)
T ss_pred HHHHHHHHHHHccc------cccccchhhHHHHHHHHHHhhhH-----------------------HH-----HHHHHHH
Confidence 46789999999999 99999977777766655444332 22 6677888
Q ss_pred hCCCCCCcccHHHHHHHHhccC
Q 025397 135 LDTEDEGKVCKGEIQNALGHMG 156 (253)
Q Consensus 135 lD~D~dG~LS~~ELr~aL~~l~ 156 (253)
.+.-++|++..++.+.+...++
T Consensus 181 ~~~~~~~k~~~~~~~~~~~~~~ 202 (746)
T KOG0169|consen 181 SDNSQTGKLEEEEFVKFRKELT 202 (746)
T ss_pred HHhhccceehHHHHHHHHHhhc
Confidence 8888899999999998887755
No 151
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=25.83 E-value=78 Score=28.63 Aligned_cols=56 Identities=11% Similarity=0.205 Sum_probs=39.7
Q ss_pred HHhhhCC-CCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHH
Q 025397 131 LFADLDT-EDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELL 199 (253)
Q Consensus 131 ~F~~lD~-D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lm 199 (253)
.|-+||. ..||++|..||.+.-.- +-|. .+-....|...|.|+||-|+..|...-+
T Consensus 192 qf~qld~~p~d~~~sh~el~pl~ap------~ipm-------e~c~~~f~e~cd~~nd~~ial~ew~~c~ 248 (259)
T KOG4004|consen 192 QFGQLDQHPIDGYLSHTELAPLRAP------LIPM-------EHCTTRFFETCDLDNDKYIALDEWAGCF 248 (259)
T ss_pred eeccccCCCccccccccccccccCC------cccH-------HhhchhhhhcccCCCCCceeHHHhhccc
Confidence 4778886 56999999999854211 1111 2345667888999999999999986543
No 152
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=25.50 E-value=1.8e+02 Score=23.08 Aligned_cols=41 Identities=20% Similarity=0.170 Sum_probs=33.6
Q ss_pred HHHHHHhccCCCcccCHHHHHHHHHHHHHHHHHHhccCCeE
Q 025397 176 NDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHII 216 (253)
Q Consensus 176 ~~if~e~D~d~dg~Vd~eEF~~lmk~iL~~~A~~L~~~PV~ 216 (253)
..+.+..-..+=|..+.+|-.+.+++.+.+++..|+.+|-.
T Consensus 39 ~~~~~~l~~~G~gr~~~ee~~~~~~~~l~aLs~~Lg~~~~l 79 (126)
T cd03211 39 REARRKLKAIGWDDKTLDQVIEEVDQCCQALSQRLGTQPYF 79 (126)
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Confidence 34455555556678899999999999999999999999954
No 153
>PLN02952 phosphoinositide phospholipase C
Probab=25.49 E-value=1.2e+02 Score=31.23 Aligned_cols=54 Identities=19% Similarity=0.274 Sum_probs=38.5
Q ss_pred CCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHH
Q 025397 139 DEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 202 (253)
Q Consensus 139 ~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~i 202 (253)
+.|+++.+|.+.+...+......|| . -+..||.++..++ +.++.++|...|++.
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r-~--------ei~~lf~~~~~~~-~~mt~~~l~~FL~~~ 66 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPP-D--------DVKDVFCKFSVGG-GHMGADQLRRFLVLH 66 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCCh-H--------HHHHHHHHHhCCC-CccCHHHHHHHHHHh
Confidence 4789999999877666553222232 2 3788999986544 679999999999763
No 154
>PF10962 DUF2764: Protein of unknown function (DUF2764); InterPro: IPR024492 This bacterial family of proteins has no known function.
Probab=24.53 E-value=5.8e+02 Score=23.73 Aligned_cols=142 Identities=22% Similarity=0.353 Sum_probs=86.9
Q ss_pred CCCCccccHHHHHH-HHHccccccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCC
Q 025397 25 TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDP 103 (253)
Q Consensus 25 d~d~G~Ls~~El~~-l~~~~~~~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~P 103 (253)
+.- |.+|..|+.. +....-++.. ..++|+.+++=+.+.+... .... ...+.+++..|...++..-
T Consensus 68 ~~~-g~~~~~el~~~~~~~~~~~~~-~~~lP~y~~~Fl~~y~~~~------~e~~--~~~e~~L~~~yy~~~~~~~---- 133 (271)
T PF10962_consen 68 DPR-GNYSEEELEELIKAQKEGDEP-DKGLPSYLKDFLEDYLNEE------AEER--IRHEDRLVAAYYAYAMKSS---- 133 (271)
T ss_pred Ccc-cCcCHHHHHHHHHHHHhcccc-cccccHHHHHHHHHHcccc------hhhc--cchHHHHHHHHHHHHHHcc----
Confidence 455 9999999999 6655532211 3468998888777776655 2222 5577788888888766633
Q ss_pred eEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCC------cccHHHHHHHHhc-cCcccCCCCCCCCCCCchHHHH
Q 025397 104 LVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEG------KVCKGEIQNALGH-MGVEFGVPPFSECRSTEFPQLN 176 (253)
Q Consensus 104 i~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG------~LS~~ELr~aL~~-l~v~~GlPp~~~~~~~~~~~~~ 176 (253)
..|+.+=..|+..+..++..+-.-+-| ...-.++..++.+ .+.++|+| + +-+++.
T Consensus 134 -----------n~Fl~~~~~F~~~lRnilaAlr~R~~g~d~~~~l~g~~~v~~~Lr~s~a~dFgL~--~-----~~p~l~ 195 (271)
T PF10962_consen 134 -----------NPFLREWFEFNLELRNILAALRARKLGFDVSKELVGDGEVAEALRQSNAPDFGLP--E-----EFPYLP 195 (271)
T ss_pred -----------CHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCcHHHHHHHHhcCCCCCCCC--c-----cchhHH
Confidence 345555566777777777665332221 1344566666665 55688887 2 235678
Q ss_pred HHHHHhccCCCcccCHHHHHHHHH
Q 025397 177 DILKKHGAEGEEELGQAQFTELLR 200 (253)
Q Consensus 177 ~if~e~D~d~dg~Vd~eEF~~lmk 200 (253)
++++.++.+ -.+..+..+..++
T Consensus 196 ~~~~~~~~~--~l~~~E~~Ld~~r 217 (271)
T PF10962_consen 196 ELIRIYEEE--PLVERERLLDLLR 217 (271)
T ss_pred HHHHHHccC--CHHHHHHHHHHHH
Confidence 888865432 2233355555554
No 155
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=24.20 E-value=1.4e+02 Score=23.66 Aligned_cols=42 Identities=12% Similarity=0.166 Sum_probs=33.9
Q ss_pred HHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCe
Q 025397 57 LKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPL 104 (253)
Q Consensus 57 ~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi 104 (253)
....+.+++..- +-|..+.+|..+.+++.+.+++..|+++|-
T Consensus 37 ~r~~~~~~l~~~------G~gr~~~ee~~~~~~~~l~aLs~~Lg~~~~ 78 (126)
T cd03211 37 KQREARRKLKAI------GWDDKTLDQVIEEVDQCCQALSQRLGTQPY 78 (126)
T ss_pred HHHHHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 455666666555 567889999999999999999999999663
No 156
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=24.11 E-value=1.6e+02 Score=25.35 Aligned_cols=37 Identities=16% Similarity=0.269 Sum_probs=31.4
Q ss_pred ccCHHHHHHHHHHHHHHHHhHhC---CCCeEEEEecChhH
Q 025397 78 EFDRDHASKLASDYITAIADELK---DDPLVVCVLDGNML 114 (253)
Q Consensus 78 ~i~~~eF~~~l~~~l~~iA~~L~---~~Pi~v~v~dGs~l 114 (253)
-++.+++...++++...|+...+ ..|++|.+..|+..
T Consensus 8 l~~~~~i~~~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~ 47 (178)
T PRK15423 8 MIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFM 47 (178)
T ss_pred ecCHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCChH
Confidence 47899999999999999998776 36899999999854
No 157
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=24.10 E-value=96 Score=22.53 Aligned_cols=26 Identities=23% Similarity=0.547 Sum_probs=17.7
Q ss_pred HHHHHHHhccCCCcccCHHHHHHHHHH
Q 025397 175 LNDILKKHGAEGEEELGQAQFTELLRQ 201 (253)
Q Consensus 175 ~~~if~e~D~d~dg~Vd~eEF~~lmk~ 201 (253)
+..||..+.. +.+.++.++|+..|++
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~ 27 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLRE 27 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHH
Confidence 4567777744 5677777777777763
No 158
>PRK11409 antitoxin YefM; Provisional
Probab=24.04 E-value=2e+02 Score=21.59 Aligned_cols=74 Identities=11% Similarity=0.214 Sum_probs=46.1
Q ss_pred ccCHHHHHHHHHHHHHHHHhHhCCCCeEEEEecChhHHHhhcCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccCc
Q 025397 78 EFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGV 157 (253)
Q Consensus 78 ~i~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~dGs~l~~~v~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v 157 (253)
.++-.+|+..|.+|+..+.+. ..||+|..-++. .-.+-+.++|+...+.++-.-+.. ..+-|+.+++++..
T Consensus 3 ~i~~s~~R~~l~~~l~~v~~~--~epv~ITr~g~~--~~Vl~S~~~yesl~Etl~ll~~p~-----~~~~l~~~i~~~~~ 73 (83)
T PRK11409 3 TISYSEARQNLSATMMKAVED--HAPILITRQNGE--ACVLMSLEEYNSLEETAYLLRSPA-----NARRLMDSIDSLKS 73 (83)
T ss_pred eEcHHHHHHHHHHHHHHHhcc--CCcEEEEeCCCC--CEEEEeHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHc
Confidence 367789999999999877654 789998877653 223555666777766654432211 24455556666544
Q ss_pred ccC
Q 025397 158 EFG 160 (253)
Q Consensus 158 ~~G 160 (253)
..|
T Consensus 74 G~~ 76 (83)
T PRK11409 74 GKG 76 (83)
T ss_pred CCC
Confidence 333
No 159
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=23.93 E-value=2e+02 Score=21.55 Aligned_cols=51 Identities=8% Similarity=0.050 Sum_probs=35.7
Q ss_pred ccccHHHHHH-HHHccccccccCCC--CC----hHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHH
Q 025397 29 STVTGAQLLD-FAENEASSSLFGLS--LP----QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDY 91 (253)
Q Consensus 29 G~Ls~~El~~-l~~~~~~~~~~~~~--lp----~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~ 91 (253)
+.|+.++|.+ |.++...++..+.. .+ ...+..||++ ++ ||..+|.+-+.=|
T Consensus 3 ~~I~~~kM~~IL~D~~l~~a~~~~~~~~~~~~~~~~~~~I~kK--y~----------Ids~~f~~S~~YY 60 (87)
T PF14129_consen 3 NLIPEDKMEDILYDLHLAEAMKSSNQDSSDDNMIAYYQYIFKK--YG----------IDSAQFDSSMVYY 60 (87)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH--cC----------CCHHHHHHHHHHH
Confidence 8899999999 88887766544311 11 3578999999 66 7788886644433
No 160
>PF12767 SAGA-Tad1: Transcriptional regulator of RNA polII, SAGA, subunit; InterPro: IPR024738 The yeast Spt-Ada-Gcn5-Acetyl (SAGA) transferase complex is a multifunctional coactivator involved in multiple cellular processes [], including regulation of transcription by RNA polymerase II [, ]. It is formed of five major modular subunits and shows a high degree of structural conservation to human TFTC and STAGA []. This entry represents Ada1 (known as Tada1 in higher eukaryotes), one of the subunits that constitute the SAGA core. It also functions as a component of the SALSA and SLIK complexes. ; GO: 0070461 SAGA-type complex
Probab=23.69 E-value=1.3e+02 Score=26.98 Aligned_cols=49 Identities=18% Similarity=0.377 Sum_probs=37.1
Q ss_pred CCcccHHHHHHHHhc-cCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHHHHH
Q 025397 140 EGKVCKGEIQNALGH-MGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 203 (253)
Q Consensus 140 dG~LS~~ELr~aL~~-l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk~iL 203 (253)
.+.|...+++..|.+ +|.+ ....|=+.++.| -.|+++++||-.++..+|
T Consensus 6 ~~Ridl~~lk~~l~~~LG~~------------~~~~Y~~~l~~f---l~~klsk~Efd~~~~~~L 55 (252)
T PF12767_consen 6 NSRIDLEELKSQLQKRLGPD------------RWKKYFQSLKRF---LSGKLSKEEFDKECRRIL 55 (252)
T ss_pred ccccCHHHHHHHHHHHHChH------------HHHHHHHHHHHH---HHhccCHHHHHHHHHHHh
Confidence 567778888888766 5532 134688888888 568899999999988776
No 161
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=23.03 E-value=58 Score=27.25 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=20.8
Q ss_pred HHHHHHHHh-------ccCCCcccCHHHHHHHHHHHHH
Q 025397 174 QLNDILKKH-------GAEGEEELGQAQFTELLRQVLQ 204 (253)
Q Consensus 174 ~~~~if~e~-------D~d~dg~Vd~eEF~~lmk~iL~ 204 (253)
-+..|+++| -.+.++.|+++.|+..|+-.|+
T Consensus 26 klkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe 63 (138)
T PF14513_consen 26 KLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLE 63 (138)
T ss_dssp -HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHc
Confidence 345566666 2345669999999999996653
No 162
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=22.76 E-value=94 Score=20.73 Aligned_cols=29 Identities=28% Similarity=0.505 Sum_probs=20.5
Q ss_pred HHHHHHHhc-cC-CCcccCHHHHHHHHHHHH
Q 025397 175 LNDILKKHG-AE-GEEELGQAQFTELLRQVL 203 (253)
Q Consensus 175 ~~~if~e~D-~d-~dg~Vd~eEF~~lmk~iL 203 (253)
+-.+|.++. .+ ....++..||+++|++=+
T Consensus 8 iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~El 38 (44)
T PF01023_consen 8 IIDVFHKYAGKEGDKDTLSKKELKELLEKEL 38 (44)
T ss_dssp HHHHHHHHHTSSSSTTSEEHHHHHHHHHHHS
T ss_pred HHHHHHHHhccCCCCCeEcHHHHHHHHHHHH
Confidence 446777763 33 455689999999998643
No 163
>COG1658 Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]
Probab=22.57 E-value=1.3e+02 Score=24.86 Aligned_cols=49 Identities=27% Similarity=0.394 Sum_probs=36.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhccCCeEEEeccccccChhHHHHhhch------hhhhhhhccc
Q 025397 190 LGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVIQHL------VFLCRESWHK 246 (253)
Q Consensus 190 Vd~eEF~~lmk~iL~~~A~~L~~~PV~v~~~~~~~dGs~l~~~l~~~------~~~~~~~~~~ 246 (253)
+++.++.++ ++..+..+.||+..+-. +.|+.||+.+..- +.++|.+|..
T Consensus 40 i~~~~~ie~-------i~~~~~~k~VIILTD~D-~~Ge~Irk~l~~~l~~~~~~~id~~~~~~ 94 (127)
T COG1658 40 INSLETIEL-------IKKAQKYKGVIILTDPD-RKGERIRKKLKEYLPGAKGAFIDREIRNK 94 (127)
T ss_pred cchHHHHHH-------HHHhhccCCEEEEeCCC-cchHHHHHHHHHHhcccccccccHHHhhh
Confidence 455555555 45567889999998655 7899999887665 5789999986
No 164
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=22.51 E-value=2.3e+02 Score=25.93 Aligned_cols=63 Identities=10% Similarity=0.142 Sum_probs=33.3
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHH
Q 025397 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLR 200 (253)
Q Consensus 127 ~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk 200 (253)
.+-.+...+=+- ||.+|..|++ ....+-..+++++.. -....++|++- .....+.++|+..++
T Consensus 57 a~~aLl~~vAkA-DG~Vse~Ei~-~~~~l~~~~~l~~~~------r~~a~~lf~~~---k~~~~~l~~~~~~~~ 119 (267)
T PRK09430 57 TTFAVMGHLAKA-KGRVTEADIR-IASQLMDRMNLHGEA------RRAAQQAFREG---KEPDFPLREKLRQFR 119 (267)
T ss_pred HHHHHHHHHHhc-CCCcCHHHHH-HHHHHHHHcCCCHHH------HHHHHHHHHHh---cccCCCHHHHHHHHH
Confidence 344444444443 7899999988 555554456665322 11234555443 222256666666554
No 165
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=22.32 E-value=82 Score=32.56 Aligned_cols=38 Identities=11% Similarity=0.241 Sum_probs=30.6
Q ss_pred cCchhHHHHHHHHHhhhCCCCCCcccHHHHHHHHhccC
Q 025397 119 GNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMG 156 (253)
Q Consensus 119 ~~e~~f~~~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~ 156 (253)
+....--.++...|..+|.|+||-|+.+|+..++....
T Consensus 308 ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P 345 (625)
T KOG1707|consen 308 ELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAP 345 (625)
T ss_pred eccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCC
Confidence 33444555689999999999999999999998887643
No 166
>cd08033 LARP_6 La RNA-binding domain of La-related protein 6. This domain is found in animal and plant proteins related to the La autoantigen. A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Probab=21.59 E-value=1.9e+02 Score=21.79 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=36.8
Q ss_pred HHhccCCCcccCHHHHHHH--HHHH---HHHHHHHhccCCeEEEeccccccChhHHH
Q 025397 180 KKHGAEGEEELGQAQFTEL--LRQV---LQDIVDALADKHIIIIPNIKIIDGSKLRM 231 (253)
Q Consensus 180 ~e~D~d~dg~Vd~eEF~~l--mk~i---L~~~A~~L~~~PV~v~~~~~~~dGs~l~~ 231 (253)
+....|.+|-|.-+.+... |+.+ ...+++.|+.++++.+. .||..+||
T Consensus 25 ~~~~~~~dG~Vpl~~i~~F~rmk~l~~d~~~I~~Al~~S~~lev~----~d~~~VRR 77 (77)
T cd08033 25 KHVRRNKEGYVPIKLIASFKKVKALTRDWRVVAAALRRSSKLVVS----EDGKKVRR 77 (77)
T ss_pred HHhccCCCCcEehHHHhcchHHHHHcCCHHHHHHHHHhCCeEEEc----CCCCccCC
Confidence 4466788999987777632 3443 78899999999999988 88877764
No 167
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=21.35 E-value=1.5e+02 Score=29.48 Aligned_cols=56 Identities=18% Similarity=0.289 Sum_probs=41.9
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHH
Q 025397 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFT 196 (253)
Q Consensus 127 ~v~~~F~~lD~D~dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~ 196 (253)
..+.+|-.+-.- ||+||-.--+..+-+ .-+| ..+...|.+-.|.|.||.++.+||.
T Consensus 445 ~yde~fy~l~p~-~gk~sg~~ak~~mv~----sklp---------nsvlgkiwklad~d~dg~ld~eefa 500 (532)
T KOG1954|consen 445 TYDEIFYTLSPV-NGKLSGRNAKKEMVK----SKLP---------NSVLGKIWKLADIDKDGMLDDEEFA 500 (532)
T ss_pred chHhhhhccccc-CceeccchhHHHHHh----ccCc---------hhHHHhhhhhhcCCcccCcCHHHHH
Confidence 467888888654 788886666655543 2344 2467888899999999999999995
No 168
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=21.30 E-value=22 Score=28.31 Aligned_cols=52 Identities=19% Similarity=0.330 Sum_probs=27.7
Q ss_pred CCcccHHHHHHHHhccCcccCCCCCCCCCCCchHHHHHHHHHhccCCCcccCHHHHHHHHH
Q 025397 140 EGKVCKGEIQNALGHMGVEFGVPPFSECRSTEFPQLNDILKKHGAEGEEELGQAQFTELLR 200 (253)
Q Consensus 140 dG~LS~~ELr~aL~~l~v~~GlPp~~~~~~~~~~~~~~if~e~D~d~dg~Vd~eEF~~lmk 200 (253)
||.++.+|++....-+....|+||.. ..+++..++.-..+.++..+|...++
T Consensus 37 DG~v~~~E~~~i~~~~~~~~~~~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~l~ 88 (140)
T PF05099_consen 37 DGEVDPEEIEAIRQLLAERFGLSPEE---------AEELIELADELKQEPIDLEELLRELR 88 (140)
T ss_dssp TSS--CHHHHHHHHHHHHCGCGSCHH---------HHHHHHHHCHHHHHCCHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCHHH---------HHHHHHHHHHHHhccccHHHHHHHHH
Confidence 68999999996666565556666433 23333333333333556666654443
No 169
>PRK06464 phosphoenolpyruvate synthase; Validated
Probab=21.07 E-value=4e+02 Score=28.44 Aligned_cols=76 Identities=13% Similarity=0.192 Sum_probs=59.3
Q ss_pred CHHHHHHHHHHHHHHHHhHhCCCCeEEEEec----------Chh---------------HHHhhcCc--hhHHHHHHHHH
Q 025397 80 DRDHASKLASDYITAIADELKDDPLVVCVLD----------GNM---------------LKLFLGNE--DDFTMLAENLF 132 (253)
Q Consensus 80 ~~~eF~~~l~~~l~~iA~~L~~~Pi~v~v~d----------Gs~---------------l~~~v~~e--~~f~~~v~~~F 132 (253)
..++|.+++.+....++..+...||++-.+| |.+ +|-++.++ ..|...+..+.
T Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~pv~iRtlD~~~~~~~~l~Ggdk~~~~E~NP~LG~RGiR~~l~~p~~~lf~~qlraI~ 627 (795)
T PRK06464 548 PEEFYVDKLAEGIATVAAAFYPKPVIVRLSDFKSNEYANLIGGERYEPEEENPMLGFRGASRYLSESFREAFALECEAIK 627 (795)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeEEEEcCCCchhhhHHhccCCcCCCCCCCCccccchhhhcccCchHHHHHHHHHHHH
Confidence 3456778888888999999999999999999 543 35567778 89999999999
Q ss_pred hhhC-CCCCC-------cccHHHHHHHHhcc
Q 025397 133 ADLD-TEDEG-------KVCKGEIQNALGHM 155 (253)
Q Consensus 133 ~~lD-~D~dG-------~LS~~ELr~aL~~l 155 (253)
+.+| ..-.| .-|.+|++.+...+
T Consensus 628 rald~~G~~~~~ImvPmV~s~eEa~~~~~~~ 658 (795)
T PRK06464 628 RVREEMGLTNVEVMIPFVRTVEEAEKVIELL 658 (795)
T ss_pred HHHHhcCCCCeEEEecCCCCHHHHHHHHHHH
Confidence 9999 33345 12789988776654
No 170
>PF07273 DUF1439: Protein of unknown function (DUF1439); InterPro: IPR010835 This family consists of several hypothetical bacterial proteins of around 190 residues in length. Several members of this family are annotated as being putative lipoproteins and are often known as YceB. The function of this family is unknown.; PDB: 3L6I_B.
Probab=20.95 E-value=1.4e+02 Score=24.78 Aligned_cols=31 Identities=16% Similarity=0.245 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCeEEEeccc
Q 025397 192 QAQFTELLRQVLQDIVDALADKHIIIIPNIK 222 (253)
Q Consensus 192 ~eEF~~lmk~iL~~~A~~L~~~PV~v~~~~~ 222 (253)
..+...+...+...++.-|..+||+..-.++
T Consensus 103 ~~~l~~l~~~l~~~l~~~l~~~PVY~L~~~~ 133 (152)
T PF07273_consen 103 QGQLQPLIPYLNQSLAQYLENQPVYTLDPED 133 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCS-SEE--TTS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEeCccc
Confidence 3456677778889999999999999987443
No 171
>PF01341 Glyco_hydro_6: Glycosyl hydrolases family 6; InterPro: IPR016288 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The 1,4-beta cellobiohydrolase family plays a central role in the recycling of plant biomass. The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: Endoglucanases, which cut internal beta-1,4-glucosidic bonds; Exocellobiohydrolases that cut the dissaccharide cellobiose from the non-reducing end of the cellulose polymer chain; and Beta-1,4-glucosidases, which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030245 cellulose catabolic process; PDB: 2BOF_X 2BOG_X 1TML_A 3RPT_A 2BOD_X 2BOE_X 1DYS_B 3VOI_A 3VOG_A 3VOJ_A ....
Probab=20.92 E-value=1.5e+02 Score=27.91 Aligned_cols=76 Identities=21% Similarity=0.230 Sum_probs=45.8
Q ss_pred cccCHHHHHHHHHHHHHHHHhHh---CCCCeEEEEecChhHHHhhcC-----------chhHHHHHHHHHh---------
Q 025397 77 KEFDRDHASKLASDYITAIADEL---KDDPLVVCVLDGNMLKLFLGN-----------EDDFTMLAENLFA--------- 133 (253)
Q Consensus 77 g~i~~~eF~~~l~~~l~~iA~~L---~~~Pi~v~v~dGs~l~~~v~~-----------e~~f~~~v~~~F~--------- 133 (253)
+.-+.+.+++ |+..||.+| ++.|++|+++-.+.-. +|.+ ...+...+.-+-+
T Consensus 84 g~~~~~~Yk~----wId~ia~~i~~~g~~~~vvIlEPDaL~~-lvtn~~~~~C~~~~~~~~r~~~l~yAv~~L~~~~na~ 158 (298)
T PF01341_consen 84 GADSLASYKE----WIDPIAAGIKKYGDRRAVVILEPDALAN-LVTNMSTPACGNAAQQAERLELLAYAVDKLSALPNAW 158 (298)
T ss_dssp GGTHHHHHHH----HHHHHHHHHHHTTTSEEEEEE-TTCHHH-HHH-TTSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred CCCchhHHHH----HHHHHHHHHHhcCCCceEEEECcchhhh-hhcccCcccccchhccHHHHHHHHHHHHHHhcCCCeE
Confidence 4557778877 999999999 9999999999655332 2111 1223333333333
Q ss_pred -hhCCCCCCcc------cHHHHHHHHhccCc
Q 025397 134 -DLDTEDEGKV------CKGEIQNALGHMGV 157 (253)
Q Consensus 134 -~lD~D~dG~L------S~~ELr~aL~~l~v 157 (253)
++|.-+.|-+ +.+++.+.|.+.|+
T Consensus 159 vYlDaG~~~Wlgw~~n~~a~~~a~~l~~aG~ 189 (298)
T PF01341_consen 159 VYLDAGHSGWLGWDTNPSADEIAKVLRQAGV 189 (298)
T ss_dssp EEEE---HHHHTSHHHHHHHHHHHHHHHTTT
T ss_pred EEEeccchhhcCCCCCcCHHHHHHHHHhcCC
Confidence 3466666667 67777777777654
No 172
>PF10078 DUF2316: Uncharacterized protein conserved in bacteria (DUF2316); InterPro: IPR018757 Members of this family of hypothetical bacterial proteins have no known function.
Probab=20.87 E-value=2.2e+02 Score=22.15 Aligned_cols=71 Identities=17% Similarity=0.186 Sum_probs=46.9
Q ss_pred ccccHHHHHH-HHHcccc--ccccCCCCChHHHHHHHHhhcCCCCcccccccccCHHHHHHHHHHHHHHHHhHhCCCCeE
Q 025397 29 STVTGAQLLD-FAENEAS--SSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLV 105 (253)
Q Consensus 29 G~Ls~~El~~-l~~~~~~--~~~~~~~lp~~~~~~~l~~~d~~~~~~~~~~g~i~~~eF~~~l~~~l~~iA~~L~~~Pi~ 105 (253)
-..|+.||++ +..+|.+ +..-++++.+.-++.+|+-= .. .-.. -=.+|+||......=+..|+-
T Consensus 8 ~~~T~~ELq~nf~~~~ls~~~ia~dL~~s~~~le~vL~l~-~~------~~~~------vW~lRdyL~~~i~~~G~eP~P 74 (89)
T PF10078_consen 8 RRATRQELQANFELSGLSLEQIAADLGTSPEHLEQVLNLK-QP------FPED------VWILRDYLNDKIKEQGKEPVP 74 (89)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHhCCCHHHHHHHHcCC-CC------Cccc------chHHHHHHHHHHHHcCCCCCC
Confidence 3567888888 7777764 22223445566777777651 11 1111 235899999999999999998
Q ss_pred EEEecCh
Q 025397 106 VCVLDGN 112 (253)
Q Consensus 106 v~v~dGs 112 (253)
-..+-|.
T Consensus 75 fS~L~g~ 81 (89)
T PF10078_consen 75 FSALKGD 81 (89)
T ss_pred eeeeCCC
Confidence 8877664
No 173
>TIGR01399 hrcV type III secretion protein, HrcV family. Members of this family are closely homologous to the flagellar biosynthesis protein FlhA (TIGR01398) and should all participate in type III secretion systems. Examples include InvA (Salmonella enterica), LcrD (Yersinia enterocolitica), HrcV (Xanthomonas), etc. Type III secretion systems resemble flagellar biogenesis systems, and may share the property of translocating special classes of peptides through the membrane.
Probab=20.33 E-value=6.7e+02 Score=26.45 Aligned_cols=57 Identities=14% Similarity=0.310 Sum_probs=34.4
Q ss_pred hHHHHHHHHH-hccCCCc---ccCHHHHHHHHHHHHHHHHH--HhccCCeEEEeccccccChhHHHHhhc
Q 025397 172 FPQLNDILKK-HGAEGEE---ELGQAQFTELLRQVLQDIVD--ALADKHIIIIPNIKIIDGSKLRMVIQH 235 (253)
Q Consensus 172 ~~~~~~if~e-~D~d~dg---~Vd~eEF~~lmk~iL~~~A~--~L~~~PV~v~~~~~~~dGs~l~~~l~~ 235 (253)
+.-+++.+.+ .-....| .++.+...+++..+-..+.. +-+..||++.+ ..+|+++++
T Consensus 586 ~p~~E~~l~~~i~~~~~g~~~~l~p~~~~~li~~~~~~~~~~~~~g~~pVll~s-------~~~R~~lr~ 648 (677)
T TIGR01399 586 DPEIEELIRGAIRQTSTGTYLALDPDDSEQLLDQIRQAVGDLPRAPSQPVLLTS-------MDIRRYVRK 648 (677)
T ss_pred CHHHHHHHHHHHhccCCCCccccCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeC-------HHHHHHHHH
Confidence 3445665543 2222233 47777777777766655553 34567999888 557777754
No 174
>PF09105 SelB-wing_1: Elongation factor SelB, winged helix ; InterPro: IPR015189 This entry represents a domain with a winged helix-type fold, which consists of a closed 3-helical bundle with a right-handed twist, and a small beta-sheet wing []. Different winged helix domains share a common structure, but can differ in sequence. This entry is designated "type 1". The winged helix motif is involved in both DNA and RNA binding. In the elongation factor SelB, the winged helix domains recognise RNA, allowing the complex to wrap around the small ribosomal subunit. In bacteria, the incorporation of the amino acid selenocysteine into proteins requires elongation factor SelB, which binds both transfer RNA (tRNA) and mRNA. SelB binds to an mRNA hairpin formed by the selenocysteine insertion sequence (SECIS) with extremely high specificity []. ; PDB: 2V9V_A 1LVA_A 2PLY_A.
Probab=20.17 E-value=1.8e+02 Score=20.51 Aligned_cols=39 Identities=5% Similarity=0.152 Sum_probs=21.2
Q ss_pred CChHHHHHHHHhhcCCCCccccc----ccccCHHHHHHHHHHHHHHHHhH
Q 025397 53 LPQNLKSTALKHISGSDDDVTFR----IKEFDRDHASKLASDYITAIADE 98 (253)
Q Consensus 53 lp~~~~~~~l~~~d~~~~~~~~~----~g~i~~~eF~~~l~~~l~~iA~~ 98 (253)
.|+.++.+++++...+- +.+ ...++ .++.+++++.||+.
T Consensus 2 spekilaqiiqehregl---dwqeaatrasls----leetrkllqsmaaa 44 (61)
T PF09105_consen 2 SPEKILAQIIQEHREGL---DWQEAATRASLS----LEETRKLLQSMAAA 44 (61)
T ss_dssp -HHHHHHHHHHC-TT-E---EHHHHHHHHT------HHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHccC---cHHHHHHHhhcc----HHHHHHHHHHHHhc
Confidence 47888889998866661 000 12344 34566678888764
No 175
>cd08030 LA_like_plant La-motif domain of plant proteins similar to the La autoantigen. This domain is found in plant proteins related to the La autoantigen. A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Probab=20.07 E-value=1.6e+02 Score=22.83 Aligned_cols=24 Identities=25% Similarity=0.448 Sum_probs=20.7
Q ss_pred HHHHHhHhCCCCeEEEEecChhHH
Q 025397 92 ITAIADELKDDPLVVCVLDGNMLK 115 (253)
Q Consensus 92 l~~iA~~L~~~Pi~v~v~dGs~l~ 115 (253)
+..||..|+..+++.+-.||..+|
T Consensus 66 ~~~I~~ALk~S~~levseD~~~VR 89 (90)
T cd08030 66 LKAVAEALRTSTLLKVSEDGKRVG 89 (90)
T ss_pred HHHHHHHHccCCEEEEcCCCCccC
Confidence 678999999999888888887765
Done!