BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025401
(253 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225435731|ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263951 [Vitis vinifera]
Length = 245
Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 179/257 (69%), Positives = 198/257 (77%), Gaps = 16/257 (6%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDIR 59
MRGRSY+PSPP GYGRRGRSPSPRGRYGG G RDLPTSLLVRNLRHDCR ED+R
Sbjct: 1 MRGRSYSPSPP-----RGYGRRGRSPSPRGRYGGRGSARDLPTSLLVRNLRHDCRGEDLR 55
Query: 60 RPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAE 119
RPF QFG +KDIYLPRDYY+GEPRGFGF+Q+V+P DAAEAK MDGQ+L GRELTVVFAE
Sbjct: 56 RPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQILHGRELTVVFAE 115
Query: 120 ENRKKPSDMRARERGRGRF-RRRSPPPRYSRSPPPRYARSPSYGRDY-SPPPRRRNYSRS 177
ENRKKPSDMRARERGRGRF RR P RYSRSPPPR+ARSPS GRDY SP P+RR YSRS
Sbjct: 116 ENRKKPSDMRARERGRGRFYDRRRSPLRYSRSPPPRHARSPSRGRDYYSPSPKRRQYSRS 175
Query: 178 VSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSWSPSRSRTPKRNHSVSRSRSRSP 237
VSP + YSR+RSY+ P GR RS R + S SRS++P R S SR +SRSP
Sbjct: 176 VSPQDRRYSRDRSYT-------PDGRRRSYTRSPPYNGSRSRSQSPIRGESPSRLQSRSP 228
Query: 238 R-REYSGERNGDRPPSQ 253
+Y E DR PS+
Sbjct: 229 DPEDYPREAVRDRSPSE 245
>gi|297746454|emb|CBI16510.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 179/281 (63%), Positives = 198/281 (70%), Gaps = 40/281 (14%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDIR 59
MRGRSY+PSPP GYGRRGRSPSPRGRYGG G RDLPTSLLVRNLRHDCR ED+R
Sbjct: 1 MRGRSYSPSPP-----RGYGRRGRSPSPRGRYGGRGSARDLPTSLLVRNLRHDCRGEDLR 55
Query: 60 RPFEQFGAIKDIYLPRDYYSGE------------------------PRGFGFIQFVEPDD 95
RPF QFG +KDIYLPRDYY+GE PRGFGF+Q+V+P D
Sbjct: 56 RPFGQFGPLKDIYLPRDYYTGEIKVLKTSINLEEFQVILKLTLAREPRGFGFVQYVDPAD 115
Query: 96 AAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF-RRRSPPPRYSRSPPPR 154
AAEAK MDGQ+L GRELTVVFAEENRKKPSDMRARERGRGRF RR P RYSRSPPPR
Sbjct: 116 AAEAKYQMDGQILHGRELTVVFAEENRKKPSDMRARERGRGRFYDRRRSPLRYSRSPPPR 175
Query: 155 YARSPSYGRDY-SPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQ 213
+ARSPS GRDY SP P+RR YSRSVSP + YSR+RSY+ P GR RS R
Sbjct: 176 HARSPSRGRDYYSPSPKRRQYSRSVSPQDRRYSRDRSYT-------PDGRRRSYTRSPPY 228
Query: 214 SWSPSRSRTPKRNHSVSRSRSRSPR-REYSGERNGDRPPSQ 253
+ S SRS++P R S SR +SRSP +Y E DR PS+
Sbjct: 229 NGSRSRSQSPIRGESPSRLQSRSPDPEDYPREAVRDRSPSE 269
>gi|449442606|ref|XP_004139072.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449528235|ref|XP_004171111.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 285
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/243 (66%), Positives = 178/243 (73%), Gaps = 32/243 (13%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSYTPSPP GYGRRGRSPSPRGRY G RGRDLPTSLLVRNL HDCRPED+RR
Sbjct: 1 MRGRSYTPSPP-----RGYGRRGRSPSPRGRYVG-RGRDLPTSLLVRNLSHDCRPEDLRR 54
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
PF QFGAIKDIYLP+DYY+GEPRGFGF+Q+V+P DAA+AK HMDG VLLGRELTVVFAEE
Sbjct: 55 PFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEE 114
Query: 121 NRKKPSDMRARERGRGRFRRRSPPP---------------RYSRSPPPRYARSPSYGRDY 165
NRKKPSDMRARERG GR+ R P RYSRSP PR+ARS S DY
Sbjct: 115 NRKKPSDMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDY 174
Query: 166 -SPPPRRRNYSRSVSPHGQNYSRE----------RSYSRSPAYDGPRGRSRSPHRGQRQS 214
S PP++R YSRS+SP + SRE RSYSRSP DG R RS+SP + +S
Sbjct: 175 ASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRS 234
Query: 215 WSP 217
SP
Sbjct: 235 PSP 237
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
gi|297330813|gb|EFH61232.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 172/268 (64%), Positives = 194/268 (72%), Gaps = 21/268 (7%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSYTPSPP GYGRRGRSPSPRGRYGG R RDLPTSLLVRNLRHDCR ED+RR
Sbjct: 1 MRGRSYTPSPP-----RGYGRRGRSPSPRGRYGGSRDRDLPTSLLVRNLRHDCRQEDLRR 55
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
PFEQFG +KDIYLPRDYY+G+PRGFGFIQ+V+P DAAEAK HMDG LLGRELTVVFAEE
Sbjct: 56 PFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMDGSHLLGRELTVVFAEE 115
Query: 121 NRKKPSDMRARERGRGRFRR-----RSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRNYS 175
NRKKP++MR R+RG GR R RSPP PP R RS S R Y P +R+ S
Sbjct: 116 NRKKPTEMRTRDRG-GRSNRFNDRRRSPPRYSRSPPPRRGRRSRSRSRGYDSPSAKRHQS 174
Query: 176 RSVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSWSPSRSRTPKRNHSVS----R 231
RSVSP + Y +ERSYSRSP ++G R RS SP R + S SP RS +P+RN S + R
Sbjct: 175 RSVSPQDRRYEKERSYSRSPPHNGSRIRSGSPGRVKSHSRSPRRSVSPRRNRSYTPEQAR 234
Query: 232 SRSRSPRREYS------GERNGDRPPSQ 253
S+S PR+ S G +NGDR PSQ
Sbjct: 235 SQSPVPRQSRSPTPVPRGAQNGDRSPSQ 262
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
gi|13878011|gb|AAK44083.1|AF370268_1 putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|11994559|dbj|BAB02599.1| unnamed protein product [Arabidopsis thaliana]
gi|17104623|gb|AAL34200.1| putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|332641854|gb|AEE75375.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
Length = 262
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 169/267 (63%), Positives = 196/267 (73%), Gaps = 19/267 (7%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSYTPSPP GYGRRGRSPSPRGR+GG R DLPTSLLVRNLRHDCR ED+RR
Sbjct: 1 MRGRSYTPSPP-----RGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRR 55
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
PFEQFG +KDIYLPRDYY+G+PRGFGFIQF++P DAAEAK MDG +LLGRELTVVFAEE
Sbjct: 56 PFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEE 115
Query: 121 NRKKPSDMRARERG--RGRFR--RRSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRNYSR 176
NRKKP++MR R+RG RF+ RRSPP PP R RS S R Y+ PP +R+ SR
Sbjct: 116 NRKKPTEMRTRDRGGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNSPPAKRHQSR 175
Query: 177 SVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSWSPSRSRTPKRNHSVS----RS 232
SVSP + Y +ERSYSRSP ++G R RS SP R + S SP RS +P++N S + RS
Sbjct: 176 SVSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHSRSPRRSVSPRKNRSYTPEQARS 235
Query: 233 RSRSPRREYS------GERNGDRPPSQ 253
+S PR+ S G +NGDR PSQ
Sbjct: 236 QSPVPRQSRSPTPVPRGAQNGDRSPSQ 262
>gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana]
Length = 261
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 163/266 (61%), Positives = 190/266 (71%), Gaps = 18/266 (6%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSYTPSPP GYGRRGRSPSPRGR+GG R DLPTSLLVRNLRHDCR ED+RR
Sbjct: 1 MRGRSYTPSPP-----RGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRR 55
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
PFEQFG +KDIYLPRDYY+G+PRGFGFIQF++P DAAEAK MDG +LLGRELTVVFAEE
Sbjct: 56 PFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEE 115
Query: 121 NRKKPSDMRARERG--RGRFRRRSPPPRYSRSPPPRYARSPSYGR-DYSPPPRRRNYSRS 177
NRKKP++MR R+RG RF+ R P PPR R Y+ PP +R+ SRS
Sbjct: 116 NRKKPTEMRTRDRGGRSNRFQDRRRSPPRYSRSPPRRGRRSRSRSCGYNSPPAKRHQSRS 175
Query: 178 VSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSWSPSRSRTPKRNHSVS----RSR 233
VSP + Y +ERSYSRSP ++G R RS SP R + S SP RS +P++N S + RS+
Sbjct: 176 VSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHSRSPRRSVSPRKNRSYTPEQARSQ 235
Query: 234 SRSPRREYS------GERNGDRPPSQ 253
S PR+ S G +NGDR PSQ
Sbjct: 236 SPVPRQSRSPTPVPRGAQNGDRSPSQ 261
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
gi|297337670|gb|EFH68087.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/226 (64%), Positives = 166/226 (73%), Gaps = 15/226 (6%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSYTPSPP GYGRRGRSPSPRGRYGG R RDLPTSLLVRNLRHDCR ED+R+
Sbjct: 1 MRGRSYTPSPP-----RGYGRRGRSPSPRGRYGG-RSRDLPTSLLVRNLRHDCRQEDLRK 54
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
FEQFG +KDIYLPRDYY+G+PRGFGF+QF++P DAA+AK HMDG +LLGRELTVVFAEE
Sbjct: 55 SFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEE 114
Query: 121 NRKKPSDMRARERGRGRFRRRSPPPRY--------SRSPPPRYARSPSYGRDYSPPPRRR 172
NRKKP++MRARERG GR R R P R G YSPPP RR
Sbjct: 115 NRKKPTEMRARERGGGRSSRFRDRRRTPPRYYSRSRSPPRRRDRSRSRSGDYYSPPP-RR 173
Query: 173 NYSRSVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSWSPS 218
++ RS+SP + Y RSYSRSPA +G RGRS +P RG ++ SPS
Sbjct: 174 HHPRSISPREERYDGRRSYSRSPASNGSRGRSLTPARGNSRNLSPS 219
>gi|334183335|ref|NP_001185236.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195103|gb|AEE33224.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 300
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/232 (65%), Positives = 171/232 (73%), Gaps = 23/232 (9%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSYTPSPP GYGRRGRSPSPRGRYGG R RDLPTSLLVRNLRHDCR ED+R+
Sbjct: 1 MRGRSYTPSPP-----RGYGRRGRSPSPRGRYGG-RSRDLPTSLLVRNLRHDCRQEDLRK 54
Query: 61 PFEQFGAIKDIYLPRDYYSG------------EPRGFGFIQFVEPDDAAEAKRHMDGQVL 108
FEQFG +KDIYLPRDYY+G +PRGFGF+QF++P DAA+AK HMDG +L
Sbjct: 55 SFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMDGYLL 114
Query: 109 LGRELTVVFAEENRKKPSDMRARERGRG-RFRRR----SPPPRYSRSPPPRYARSPSYGR 163
LGRELTVVFAEENRKKP++MRARERG G RFR R SRSPPPR RS S
Sbjct: 115 LGRELTVVFAEENRKKPTEMRARERGGGSRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSG 174
Query: 164 DYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSW 215
DY PP RR++ RS+SP + Y RSYSRSPA DG RGRS +P RG+ +S
Sbjct: 175 DYYSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 226
>gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195102|gb|AEE33223.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 220
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 154/223 (69%), Positives = 175/223 (78%), Gaps = 10/223 (4%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSYTPSPP GYGRRGRSPSPRGRYGG R RDLPTSLLVRNLRHDCR ED+R+
Sbjct: 1 MRGRSYTPSPP-----RGYGRRGRSPSPRGRYGG-RSRDLPTSLLVRNLRHDCRQEDLRK 54
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
FEQFG +KDIYLPRDYY+G+PRGFGF+QF++P DAA+AK HMDG +LLGRELTVVFAEE
Sbjct: 55 SFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEE 114
Query: 121 NRKKPSDMRARERGRGRFRRRSPP----PRYSRSPPPRYARSPSYGRDYSPPPRRRNYSR 176
NRKKP++MRARERG GRFR R SRSPPPR RS S DY PP RR++ R
Sbjct: 115 NRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPR 174
Query: 177 SVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSWSPSR 219
S+SP + Y RSYSRSPA DG RGRS +P RG+ +S SP++
Sbjct: 175 SISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLSPTQ 217
>gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 153/222 (68%), Positives = 174/222 (78%), Gaps = 10/222 (4%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSYTPSPP GYGRRGRSPSPRGRYGG R RDLPTSLLVRNLRHDCR ED+R+
Sbjct: 1 MRGRSYTPSPP-----RGYGRRGRSPSPRGRYGG-RSRDLPTSLLVRNLRHDCRQEDLRK 54
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
FEQFG +KDIYLPRDYY+G+PRGFGF+QF++P DAA+AK HMDG +LLGRELTVVFAEE
Sbjct: 55 SFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEE 114
Query: 121 NRKKPSDMRARERGRGRFRRRSPP----PRYSRSPPPRYARSPSYGRDYSPPPRRRNYSR 176
NRKKP++MRARERG GRFR R SRSPPPR RS S DY PP RR++ R
Sbjct: 115 NRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPR 174
Query: 177 SVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSWSPS 218
S+SP + Y RSYSRSPA DG RGRS +P RG+ +S +P+
Sbjct: 175 SISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLTPA 216
>gi|255581554|ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528778|gb|EEF30785.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 216
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/182 (71%), Positives = 149/182 (81%), Gaps = 8/182 (4%)
Query: 17 GGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD 76
G YGRR RSPSPR RYGG R RDLPTSLLVRNLRHDCR ED+R PF FG +KDIYLPRD
Sbjct: 16 GYYGRRYRSPSPRNRYGG-RSRDLPTSLLVRNLRHDCRTEDLRGPFGHFGPLKDIYLPRD 74
Query: 77 YYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
YY+GEPRGFGF+Q+V+P DAA+AK HMDG++LLGRELTVVFAEENRKKP++MRARER RG
Sbjct: 75 YYTGEPRGFGFVQYVDPADAADAKHHMDGEILLGRELTVVFAEENRKKPAEMRARERVRG 134
Query: 137 R-FRRRSPPPRYSRSPPPR--YARSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSR 193
R + R+ P YSRSP R Y+RSP Y YS PR+RNYSRS+SP + Y RE+S+SR
Sbjct: 135 RSYDRKRSPQCYSRSPRYRRSYSRSPLY---YSRSPRQRNYSRSISPRDRRY-REQSFSR 190
Query: 194 SP 195
SP
Sbjct: 191 SP 192
>gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|75337149|sp|Q9SEU4.1|SR33_ARATH RecName: Full=Serine/arginine-rich splicing factor 33; AltName:
Full=SC35-like splicing factor 33; Short=At-SCL33;
Short=AtSCL33
gi|6572475|gb|AAF17288.1|AF099940_1 Serine/arginine-rich protein [Arabidopsis thaliana]
gi|9843659|emb|CAC03603.1| SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana]
gi|56744214|gb|AAW28547.1| At1g55310 [Arabidopsis thaliana]
gi|332195101|gb|AEE33222.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 287
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 145/219 (66%), Positives = 164/219 (74%), Gaps = 10/219 (4%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSYTPSPP GYGRRGRSPSPRGRYGG R RDLPTSLLVRNLRHDCR ED+R+
Sbjct: 1 MRGRSYTPSPP-----RGYGRRGRSPSPRGRYGG-RSRDLPTSLLVRNLRHDCRQEDLRK 54
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
FEQFG +KDIYLPRDYY+G+PRGFGF+QF++P DAA+AK HMDG +LLGRELTVVFAEE
Sbjct: 55 SFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEE 114
Query: 121 NRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYGR----DYSPPPRRRNYSR 176
NRKKP++MRARERG GRFR R P S R DY PP RR++ R
Sbjct: 115 NRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPR 174
Query: 177 SVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSW 215
S+SP + Y RSYSRSPA DG RGRS +P RG+ +S
Sbjct: 175 SISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 213
>gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/219 (69%), Positives = 171/219 (78%), Gaps = 10/219 (4%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSYTPSPP GYGRRGRSPSPRGRYGG R RDLPTSLLVRNLRHDCR ED+R+
Sbjct: 1 MRGRSYTPSPP-----RGYGRRGRSPSPRGRYGG-RSRDLPTSLLVRNLRHDCRQEDLRK 54
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
FEQFG +KDIYLPRDYY+G+PRGFGF+QF++P DAA+AK HMDG +LLGRELTVVFAEE
Sbjct: 55 SFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEE 114
Query: 121 NRKKPSDMRARERGRGRFRRRSPP----PRYSRSPPPRYARSPSYGRDYSPPPRRRNYSR 176
NRKKP++MRARERG GRFR R SRSPPPR RS S DY PP RR++ R
Sbjct: 115 NRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPR 174
Query: 177 SVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSW 215
S+SP + Y RSYSRSPA DG RGRS +P RG+ +S
Sbjct: 175 SISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 213
>gi|357462657|ref|XP_003601610.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355490658|gb|AES71861.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|388503978|gb|AFK40055.1| unknown [Medicago truncatula]
Length = 248
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/252 (61%), Positives = 176/252 (69%), Gaps = 21/252 (8%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSY+PSPPPR S G G GRSPSPR RY R DLPTSLLVRNLRHDCRPED+RR
Sbjct: 1 MRGRSYSPSPPPRYSRRGGGGGGRSPSPRRRYAP-RQSDLPTSLLVRNLRHDCRPEDLRR 59
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
PF FG +KDIYLP+DYY+G+PRGFGFIQFV+P DAA+AK HMDGQVLLGRE+TVVFAEE
Sbjct: 60 PFGHFGPLKDIYLPKDYYTGQPRGFGFIQFVDPADAADAKYHMDGQVLLGREITVVFAEE 119
Query: 121 NRKKPSDMRARERGRGRF------RRRSPPPRYSRSPPPRYARSPSYGRDY-SPPPRRRN 173
NRKKP++MR RER GR R PPR+ RDY SPPP+RR
Sbjct: 120 NRKKPTEMRVRERSSGRHSDRRRSPPRYSRSPRYSRSPPRHRSRSRGSRDYHSPPPKRRE 179
Query: 174 YSRSVSP-------HGQNYSRERSYSRSPAYDG-PRGRSRSPHRGQRQSWSPSRSRTPKR 225
YSRSVSP G +SRERSYSRSP +G R RS+SP +G +S SPS SR +
Sbjct: 180 YSRSVSPEDRRHSREGSQHSRERSYSRSPPKNGDARSRSQSPVKGSVESRSPSPSRDVR- 238
Query: 226 NHSVSRSRSRSP 237
+ SRSRSP
Sbjct: 239 ----AASRSRSP 246
>gi|359487440|ref|XP_002267230.2| PREDICTED: uncharacterized protein LOC100259677 [Vitis vinifera]
Length = 225
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 159/207 (76%), Gaps = 21/207 (10%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSY+PSPP GY RRGRSPSPRGR GGRGRDLPTSLLVRNLRHDCRPED+RR
Sbjct: 1 MRGRSYSPSPP-----RGYSRRGRSPSPRGR-HGGRGRDLPTSLLVRNLRHDCRPEDLRR 54
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
PF QFG +KDIYLPRDYY+GEPRGFGF+Q+V+P DAAEAK MDGQVLLGRELTVVFAEE
Sbjct: 55 PFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQVLLGRELTVVFAEE 114
Query: 121 NRKKPSDMRARERGRGR-------FRRRSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRN 173
NRK+P DMRARER RGR R S PRY+RS +RSP++ Y P PRRR+
Sbjct: 115 NRKRPVDMRARERTRGRPSDRRRSPPRYSRSPRYARS----RSRSPNH---YPPSPRRRH 167
Query: 174 YSRSVSPHGQ-NYSRERSYSRSPAYDG 199
YSRSVSP + YS E+ YS SP G
Sbjct: 168 YSRSVSPQDKRRYSGEQPYSASPPVKG 194
>gi|224052944|ref|XP_002297637.1| predicted protein [Populus trichocarpa]
gi|222844895|gb|EEE82442.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/164 (68%), Positives = 120/164 (73%), Gaps = 37/164 (22%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSY+PSPP GYGRRGRSPSPRGRYGG R RDLPTSLLVRNLRHDCRPED+RR
Sbjct: 1 MRGRSYSPSPP-----RGYGRRGRSPSPRGRYGG-RSRDLPTSLLVRNLRHDCRPEDLRR 54
Query: 61 PFEQFGAIKDIYLPRDYYSG-------------------------------EPRGFGFIQ 89
PFEQFGA+KDIYLPRDYY+G EPRGFGF+Q
Sbjct: 55 PFEQFGALKDIYLPRDYYTGSFEDDVNDSEDLKEVGFEYIVKRFQVLKSFKEPRGFGFVQ 114
Query: 90 FVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
F +P DAAEAK HMDG+VLLGRELTVVFAEENRKKP DMR RER
Sbjct: 115 FADPHDAAEAKHHMDGRVLLGRELTVVFAEENRKKPMDMRTRER 158
>gi|363807232|ref|NP_001242100.1| uncharacterized protein LOC100779321 [Glycine max]
gi|255635455|gb|ACU18080.1| unknown [Glycine max]
Length = 253
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/208 (63%), Positives = 152/208 (73%), Gaps = 22/208 (10%)
Query: 38 RDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAA 97
+DLPTSLLVRNLRHDCRPED+RRPF QFG +KDIYLP+DYY+GEPRGFGF+QFV+P DAA
Sbjct: 37 QDLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQFVDPADAA 96
Query: 98 EAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYA- 156
+AK HMDGQVLLGRELTVVFAEENRKKP++MR RER RR PPRYSRSP +
Sbjct: 97 DAKYHMDGQVLLGRELTVVFAEENRKKPTEMRTRERRGRFSDRRRSPPRYSRSPRYSRSP 156
Query: 157 ----------RSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSY---------SRSPAY 197
RS S+ RDY P+RR YSRSVSP G+ YSRERSY SRSP Y
Sbjct: 157 RYSRSPPPRHRSRSHSRDYY-SPKRREYSRSVSPEGRRYSRERSYSQHNRERSFSRSPPY 215
Query: 198 D-GPRGRSRSPHRGQRQSWSPSRSRTPK 224
+ G R RS+SP +G +S SPS +R K
Sbjct: 216 NGGSRSRSQSPAKGPGRSRSPSLNRDEK 243
>gi|356553015|ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1 [Glycine
max]
gi|356553017|ref|XP_003544855.1| PREDICTED: uncharacterized protein LOC100775883 isoform 2 [Glycine
max]
Length = 249
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/237 (62%), Positives = 170/237 (71%), Gaps = 17/237 (7%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSY+PSPPPR S G G R SP R + +DLPTSLLVRNLRHDCRPED+RR
Sbjct: 1 MRGRSYSPSPPPRHSRRGGGGRSPSPRGRYPPRPRQ-QDLPTSLLVRNLRHDCRPEDLRR 59
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
PF QFG +KDIYLP+DYY+GEPRGFGF+Q+V+P DAA+AK HMDGQVLLGRELTVVFAEE
Sbjct: 60 PFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAEE 119
Query: 121 NRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYGRD------YSPPPRRRNY 174
NRKKP++MR RER + RR PPRYSRSP + P + YSPP +RR Y
Sbjct: 120 NRKKPTEMRTRERRGRFYDRRRSPPRYSRSPRYSRSPPPRHRSRSRSRDYYSPPAKRREY 179
Query: 175 SRSVSPHGQNY---------SRERSYSRSPAYD-GPRGRSRSPHRGQRQSWSPSRSR 221
SRSVSP + Y SRERSYSRSP Y+ G R RS+SP +G QS SPS +R
Sbjct: 180 SRSVSPEDRRYSRERSFSQHSRERSYSRSPPYNGGSRSRSQSPAKGPGQSRSPSPNR 236
>gi|226493261|ref|NP_001151991.1| LOC100285628 [Zea mays]
gi|195651649|gb|ACG45292.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|448878242|gb|AGE46084.1| arginine/serine-rich splicing factor SCL25B transcript I [Zea mays]
gi|448878246|gb|AGE46086.1| arginine/serine-rich splicing factor SCL25B transcript III [Zea
mays]
gi|448878250|gb|AGE46088.1| arginine/serine-rich splicing factor SCL25B transcript V [Zea mays]
gi|448878254|gb|AGE46090.1| arginine/serine-rich splicing factor SCL25B transcript VII [Zea
mays]
gi|448878256|gb|AGE46091.1| arginine/serine-rich splicing factor SCL25B transcript VIII [Zea
mays]
Length = 209
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/207 (61%), Positives = 148/207 (71%), Gaps = 18/207 (8%)
Query: 2 RGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
RG SY+PSPP GY RR RSPSP YGG RGRDLPTSLLVRNLR DCRPED+RRP
Sbjct: 3 RGYSYSPSPP-----RGYRRRARSPSPHDHYGG-RGRDLPTSLLVRNLRRDCRPEDLRRP 56
Query: 62 FEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEEN 121
F QFG +KDIYLPRDYY+G+PRGFGF+Q+ +P DAA+AK +MDGQV+LGR++TVVFAEEN
Sbjct: 57 FGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEEN 116
Query: 122 RKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRNYSRSVSPH 181
RKKP +MRAR+R RG RYSRS P Y R S P R ++YSRS +
Sbjct: 117 RKKPQEMRARDRVRG---HSYDDRRYSRSRSPHYYRGRS-------PSRSQSYSRSPPQN 166
Query: 182 GQNYSRERSYSRSPAYDGPRGRSRSPH 208
++ RERSYS SP R RS SP+
Sbjct: 167 PRHRLRERSYSGSPV--DSRSRSGSPY 191
>gi|388509350|gb|AFK42741.1| unknown [Lotus japonicus]
Length = 221
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 146/198 (73%), Gaps = 9/198 (4%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSY+ SP P GRR RSPSP+GRY G R RDLPTSLLVRNL D R ED+
Sbjct: 1 MRGRSYSYSPSP--PRRYGGRRRRSPSPKGRYRG-RERDLPTSLLVRNLHRDTRTEDLHG 57
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
PF FG IKD+YLPRDYY+G PRGFGF+Q+V+P DAA+AK H+DGQ+LLGRELTVVFAEE
Sbjct: 58 PFSHFGPIKDVYLPRDYYTGNPRGFGFVQYVDPADAADAKYHLDGQILLGRELTVVFAEE 117
Query: 121 NRKKPSDMRARERGRGR---FRRRSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRNYSRS 177
NRKKP++MRARER R + R P YSRS PRYAR+ S DY+P PRR YS+S
Sbjct: 118 NRKKPAEMRARERHSTRERSYDYRRSPRGYSRS--PRYARTYSRSPDYTPSPRRWRYSKS 175
Query: 178 VSPHGQNYSRERSYSRSP 195
+SP + Y R RSYS SP
Sbjct: 176 ISPRDRRYGR-RSYSGSP 192
>gi|326532152|dbj|BAK01452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 208
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/167 (67%), Positives = 130/167 (77%), Gaps = 16/167 (9%)
Query: 2 RGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
RG SY+PSPPPRG G R RSPSPR RY G RGRDLPTSLLVRNLR DCRP+D+RRP
Sbjct: 3 RGYSYSPSPPPRGYRG----RARSPSPRDRYDG-RGRDLPTSLLVRNLRRDCRPDDLRRP 57
Query: 62 FEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEEN 121
F QFG +KD+Y+PRDYY+ EPRGFGF+Q+ +PDDAA+AK +MDGQV+LGRE+ VVFA+EN
Sbjct: 58 FAQFGRLKDVYIPRDYYTQEPRGFGFVQYFDPDDAADAKYYMDGQVILGREVAVVFAQEN 117
Query: 122 RKKPSDMRARERGRGRF--RRRSPPPR---------YSRSPPPRYAR 157
RKKP++MR RE RGR +R SP PR YSRSP PR AR
Sbjct: 118 RKKPAEMRTRESSRGRSYDQRHSPSPRGRPSYRGRSYSRSPSPRPAR 164
>gi|372863947|gb|AEX99749.1| putative serine/arginine-rich protein SCL subfamily member
[Saccharum hybrid cultivar]
Length = 209
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 102/135 (75%), Positives = 115/135 (85%), Gaps = 6/135 (4%)
Query: 2 RGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
RG SY+PSPP GY R RSPSPR YGG RGRDLPTSLLVRNLR DCRPED+RRP
Sbjct: 3 RGYSYSPSPPR-----GYRRSERSPSPRDYYGG-RGRDLPTSLLVRNLRRDCRPEDLRRP 56
Query: 62 FEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEEN 121
F QFG +KDIYLPRDYY+GEPRGFGF+Q+ EPDDAA+AK +MDGQV+LGR++TVVFAEEN
Sbjct: 57 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYYEPDDAADAKYYMDGQVVLGRQITVVFAEEN 116
Query: 122 RKKPSDMRARERGRG 136
RKKP +MRAR+R RG
Sbjct: 117 RKKPQEMRARDRVRG 131
>gi|255644989|gb|ACU22994.1| unknown [Glycine max]
Length = 214
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 155/214 (72%), Gaps = 16/214 (7%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSY+PSPPPR S G G R SP R + +DLPTSLLVRNLRHDCRPED+RR
Sbjct: 1 MRGRSYSPSPPPRHSRRGGGGRSPSPRGRYPPRPRQ-QDLPTSLLVRNLRHDCRPEDLRR 59
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
PF QFG +KDIYLP+DYY+GEPRGFGF+Q+V+P DAA+AK HMDGQVLLGRELTVVFAEE
Sbjct: 60 PFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAEE 119
Query: 121 NRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYGRD------YSPPPRRRNY 174
NRKKP++MR RER + RR PPRYSRSP + P + YSPP +RR Y
Sbjct: 120 NRKKPTEMRTRERRGRFYDRRRSPPRYSRSPRYSRSPPPRHRSRSRSRDYYSPPAKRREY 179
Query: 175 SRSVSPHGQNY---------SRERSYSRSPAYDG 199
SRSVSP + Y SRERSYSRSP Y+G
Sbjct: 180 SRSVSPEDRRYSRERSFSQHSRERSYSRSPPYNG 213
>gi|194688600|gb|ACF78384.1| unknown [Zea mays]
gi|194700100|gb|ACF84134.1| unknown [Zea mays]
gi|219887871|gb|ACL54310.1| unknown [Zea mays]
gi|224035011|gb|ACN36581.1| unknown [Zea mays]
gi|238908719|gb|ACF81490.2| unknown [Zea mays]
gi|448878248|gb|AGE46087.1| arginine/serine-rich splicing factor SCL25B transcript IV [Zea
mays]
Length = 209
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/135 (73%), Positives = 114/135 (84%), Gaps = 6/135 (4%)
Query: 2 RGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
RG SY+PSPP GY RR RSPSP YGG RGRDLPTSLLVRNLR DCRPED+RRP
Sbjct: 3 RGYSYSPSPP-----RGYRRRARSPSPHDHYGG-RGRDLPTSLLVRNLRRDCRPEDLRRP 56
Query: 62 FEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEEN 121
F QFG +KDIYLPRDYY+G+PRGFGF+Q+ +P DAA+AK +MDGQV+LGR++TVVFAEEN
Sbjct: 57 FGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEEN 116
Query: 122 RKKPSDMRARERGRG 136
RKKP +MRAR+R RG
Sbjct: 117 RKKPQEMRARDRVRG 131
>gi|255582554|ref|XP_002532060.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528264|gb|EEF30315.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 246
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 159/252 (63%), Positives = 178/252 (70%), Gaps = 8/252 (3%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRR 60
MRGRSY+PSPPPRG G GR G G G GRDLPTSLLVRNLRHDCRPED+RR
Sbjct: 1 MRGRSYSPSPPPRGYGRRGGRSRSPRGRHGGGGRGGGRDLPTSLLVRNLRHDCRPEDLRR 60
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
PFEQFGA+KDIYLPRDYY+GEPRGFGF+Q+ +P DAAEAK HMDG+VLLGRELTVVFAEE
Sbjct: 61 PFEQFGALKDIYLPRDYYTGEPRGFGFVQYADPQDAAEAKHHMDGRVLLGRELTVVFAEE 120
Query: 121 NRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRNYSRSVSP 180
NRKKP DMRARER R S P + S DY PP +R YS+S+SP
Sbjct: 121 NRKKPVDMRARERAGRGRFRDRRRSPPRYSRSPPPRYARSRSHDYGSPPPKRRYSKSISP 180
Query: 181 HGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSWSPSRSRTPKRNHSVSRSRSRSPRR- 239
G+ YS+ERSYSRS R RSR+P+R Q Q+ SRSRTP R+ S RSRS+SP R
Sbjct: 181 QGKRYSQERSYSRS------RSRSRTPNRDQSQTPR-SRSRTPNRSRSPRRSRSQSPTRD 233
Query: 240 EYSGERNGDRPP 251
EY E GDR P
Sbjct: 234 EYPREHIGDRSP 245
>gi|195631119|gb|ACG36660.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195642888|gb|ACG40912.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195645762|gb|ACG42349.1| splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 209
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 147/207 (71%), Gaps = 18/207 (8%)
Query: 2 RGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
RG SY+PSPP GY RR RSPSP YGG RGRDLPTSLLVRNLR DCRPED+RRP
Sbjct: 3 RGYSYSPSPP-----RGYRRRARSPSPHDHYGG-RGRDLPTSLLVRNLRRDCRPEDLRRP 56
Query: 62 FEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEEN 121
F QFG +KDIYLPRDYY+G+PRGFGF+Q+ +P DAA+AK +MDGQV+LGR++TVVFAEEN
Sbjct: 57 FGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEEN 116
Query: 122 RKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRNYSRSVSPH 181
RKKP +MRAR+R RG R SRSP RSPS R ++YSRS +
Sbjct: 117 RKKPQEMRARDRVRGHSYDDRRYSR-SRSPRYYRGRSPS---------RSQSYSRSPPQN 166
Query: 182 GQNYSRERSYSRSPAYDGPRGRSRSPH 208
++ RERSYS SP R RS SP+
Sbjct: 167 PRHRLRERSYSGSPV--DSRSRSGSPY 191
>gi|357121831|ref|XP_003562621.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 205
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 134/194 (69%), Gaps = 29/194 (14%)
Query: 22 RGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGE 81
R RSPSPR RY G RGRDLPTSLLVRNLR DCRPED+RRPF QFG +KD+Y+PRDYY+ E
Sbjct: 19 RARSPSPRVRYVG-RGRDLPTSLLVRNLRRDCRPEDLRRPFGQFGRLKDVYIPRDYYTRE 77
Query: 82 PRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF--R 139
PRGFGF+Q+ +P+DAA+AK +MDGQV+LGRE+ VVFA+ENRK PS+MR RE RGR R
Sbjct: 78 PRGFGFVQYFDPEDAADAKYYMDGQVVLGREIAVVFAQENRKHPSEMRTRESSRGRSYDR 137
Query: 140 RRSPPPR---------YSRSPPPR----------YARSPSYGRDYSPPPRRRNYSRSVSP 180
RRS PR YSRSP PR Y+RSP GR S P +YSRS
Sbjct: 138 RRSLSPRGRSPFRGRSYSRSPSPRYERRRFREDSYSRSPVDGRSRSGSPLHEHYSRSA-- 195
Query: 181 HGQNYSRERSYSRS 194
RERS S S
Sbjct: 196 -----QRERSISAS 204
>gi|222637522|gb|EEE67654.1| hypothetical protein OsJ_25252 [Oryza sativa Japonica Group]
Length = 388
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/146 (70%), Positives = 116/146 (79%), Gaps = 14/146 (9%)
Query: 25 SPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRG 84
SP PR RYGG RGRDLPTSLLVRNLR DCRPED+RRPF QFG +KDIY+PRDYYSGEPRG
Sbjct: 197 SPIPRDRYGG-RGRDLPTSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRG 255
Query: 85 FGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPP 144
FGF+Q+ +PDDAA+AK +MDGQV+LGRE+ VVFAEENRKKPS+MR+R+R G R RS
Sbjct: 256 FGFVQYYDPDDAADAKYYMDGQVILGREVAVVFAEENRKKPSEMRSRDRISGS-RGRSYD 314
Query: 145 PRYSRSPPPRYARSPSYGRDYSPPPR 170
RYSRSP YSPPPR
Sbjct: 315 QRYSRSP------------RYSPPPR 328
>gi|218200082|gb|EEC82509.1| hypothetical protein OsI_26989 [Oryza sativa Indica Group]
Length = 216
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/146 (70%), Positives = 116/146 (79%), Gaps = 14/146 (9%)
Query: 25 SPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRG 84
SP PR RYGG RGRDLPTSLLVRNLR DCRPED+RRPF QFG +KDIY+PRDYYSGEPRG
Sbjct: 25 SPIPRDRYGG-RGRDLPTSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRG 83
Query: 85 FGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPP 144
FGF+Q+ +PDDAA+AK +MDGQV+LGRE+ VVFAEENRKKPS+MR+R+R G R RS
Sbjct: 84 FGFVQYYDPDDAADAKYYMDGQVILGREVAVVFAEENRKKPSEMRSRDRISGS-RGRSYD 142
Query: 145 PRYSRSPPPRYARSPSYGRDYSPPPR 170
RYSRSP YSPPPR
Sbjct: 143 QRYSRSP------------RYSPPPR 156
>gi|115473547|ref|NP_001060372.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|33146902|dbj|BAC79901.1| putative SC35-like splicing factor SCL30a [Oryza sativa Japonica
Group]
gi|113611908|dbj|BAF22286.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|215692446|dbj|BAG87866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 213
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/146 (70%), Positives = 116/146 (79%), Gaps = 14/146 (9%)
Query: 25 SPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRG 84
SP PR RYGG RGRDLPTSLLVRNLR DCRPED+RRPF QFG +KDIY+PRDYYSGEPRG
Sbjct: 22 SPIPRDRYGG-RGRDLPTSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRG 80
Query: 85 FGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPP 144
FGF+Q+ +PDDAA+AK +MDGQV+LGRE+ VVFAEENRKKPS+MR+R+R G R RS
Sbjct: 81 FGFVQYYDPDDAADAKYYMDGQVILGREVAVVFAEENRKKPSEMRSRDRISGS-RGRSYD 139
Query: 145 PRYSRSPPPRYARSPSYGRDYSPPPR 170
RYSRSP YSPPPR
Sbjct: 140 QRYSRSP------------RYSPPPR 153
>gi|212723388|ref|NP_001131976.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|194693082|gb|ACF80625.1| unknown [Zea mays]
gi|195620736|gb|ACG32198.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|413955616|gb|AFW88265.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878236|gb|AGE46081.1| arginine/serine-rich splicing factor SCL25A transcript I [Zea mays]
Length = 216
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/239 (59%), Positives = 165/239 (69%), Gaps = 34/239 (14%)
Query: 3 GRSYTPSP-PPRGSGGGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDIRR 60
GRSY SP PPRG Y RR RSPSPRGRYGG RDLPTSLLVRNLR DCRP+D+RR
Sbjct: 2 GRSYNHSPSPPRG----YRRRTRSPSPRGRYGGRDTDRDLPTSLLVRNLRRDCRPDDLRR 57
Query: 61 PFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE 120
PF +FG +KDIYLP+DYY+ EPRGFGFIQ+ +P+DA++AK +MDG++LLGRE+ VVFAEE
Sbjct: 58 PFGKFGPVKDIYLPKDYYTREPRGFGFIQYFDPEDASDAKYYMDGKMLLGREIAVVFAEE 117
Query: 121 NRKKPSDMRARE----RGR---GRFRRRSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRN 173
NRKKPSDMRARE RGR GR R RSP S RS S R YSP P+R++
Sbjct: 118 NRKKPSDMRAREKISGRGRSYDGRLRSRSPGLNGSPR-----GRSRSQSRSYSPAPKRKH 172
Query: 174 YSRSVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSWSPSRSRTPKRNHSVSRS 232
YSRS +P RERS SRSPA + RSR S SP SR+P R S+S S
Sbjct: 173 YSRSPAPR----PRERSLSRSPAVN----RSR--------SASPIVSRSPHRQGSLSVS 215
>gi|242046420|ref|XP_002461081.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|241924458|gb|EER97602.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|448878346|gb|AGE46136.1| arginine/serine-rich splicing factor SCL25B transcript I [Sorghum
bicolor]
gi|448878348|gb|AGE46137.1| arginine/serine-rich splicing factor SCL25B transcript II [Sorghum
bicolor]
Length = 209
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 102/135 (75%), Positives = 116/135 (85%), Gaps = 6/135 (4%)
Query: 2 RGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
RG SY+PSPP GY RR RSPSPR YGG RGRDLPTSLLVRNLR DCRPED+RRP
Sbjct: 3 RGYSYSPSPPR-----GYRRRERSPSPRDYYGG-RGRDLPTSLLVRNLRRDCRPEDLRRP 56
Query: 62 FEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEEN 121
F QFG +KDIYLPRDYY+GEPRGFGF+Q+ +PDDAA+AK +MDGQV+LGR++TVVFAEEN
Sbjct: 57 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYYMDGQVVLGRQITVVFAEEN 116
Query: 122 RKKPSDMRARERGRG 136
RKKP +MRAR+R RG
Sbjct: 117 RKKPQEMRARDRVRG 131
>gi|448878352|gb|AGE46139.1| arginine/serine-rich splicing factor SCL25B transcript IV [Sorghum
bicolor]
Length = 174
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/135 (75%), Positives = 116/135 (85%), Gaps = 6/135 (4%)
Query: 2 RGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
RG SY+PSPP GY RR RSPSPR YGG RGRDLPTSLLVRNLR DCRPED+RRP
Sbjct: 3 RGYSYSPSPPR-----GYRRRERSPSPRDYYGG-RGRDLPTSLLVRNLRRDCRPEDLRRP 56
Query: 62 FEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEEN 121
F QFG +KDIYLPRDYY+GEPRGFGF+Q+ +PDDAA+AK +MDGQV+LGR++TVVFAEEN
Sbjct: 57 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYYMDGQVVLGRQITVVFAEEN 116
Query: 122 RKKPSDMRARERGRG 136
RKKP +MRAR+R RG
Sbjct: 117 RKKPQEMRARDRVRG 131
>gi|224139940|ref|XP_002323350.1| predicted protein [Populus trichocarpa]
gi|222867980|gb|EEF05111.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/136 (75%), Positives = 119/136 (87%), Gaps = 6/136 (4%)
Query: 1 MRGRSYTPSP-PPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIR 59
MRGRSY+ SP PPRG YGR+ RSPSPRGR GGRGRDLPTSLLVRNLR DCRPED+R
Sbjct: 1 MRGRSYSYSPSPPRG----YGRKHRSPSPRGR-HGGRGRDLPTSLLVRNLRLDCRPEDLR 55
Query: 60 RPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAE 119
PF +FG +KD+YLPRDYY+GEPRGFGF+Q++EP DAA+AK HMDG++L GRELTVVFAE
Sbjct: 56 GPFGRFGPLKDVYLPRDYYTGEPRGFGFVQYLEPADAADAKHHMDGEILFGRELTVVFAE 115
Query: 120 ENRKKPSDMRARERGR 135
ENRKKP++MRAR+R R
Sbjct: 116 ENRKKPAEMRARDRVR 131
>gi|297722159|ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
gi|255674538|dbj|BAH92171.1| Os03g0374575 [Oryza sativa Japonica Group]
Length = 251
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/132 (76%), Positives = 113/132 (85%), Gaps = 6/132 (4%)
Query: 2 RGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
RG Y PSPP Y RR RSPSPRGRYGG R RDLPTSLLVRNLR DCRP+D+RRP
Sbjct: 10 RGYDYGPSPPRE-----YRRRARSPSPRGRYGG-RDRDLPTSLLVRNLRRDCRPDDLRRP 63
Query: 62 FEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEEN 121
F +FG +KDIYLPRDYY+GEPRGFGFIQ+ +P+DAA+AK HMDGQ+LLGRE+TVVFAEEN
Sbjct: 64 FGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEEN 123
Query: 122 RKKPSDMRARER 133
RKKPS+MRARER
Sbjct: 124 RKKPSEMRARER 135
>gi|108708411|gb|ABF96206.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 218
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/132 (76%), Positives = 113/132 (85%), Gaps = 6/132 (4%)
Query: 2 RGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
RG Y PSPP Y RR RSPSPRGRYGG R RDLPTSLLVRNLR DCRP+D+RRP
Sbjct: 3 RGYDYGPSPPRE-----YRRRARSPSPRGRYGG-RDRDLPTSLLVRNLRRDCRPDDLRRP 56
Query: 62 FEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEEN 121
F +FG +KDIYLPRDYY+GEPRGFGFIQ+ +P+DAA+AK HMDGQ+LLGRE+TVVFAEEN
Sbjct: 57 FGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEEN 116
Query: 122 RKKPSDMRARER 133
RKKPS+MRARER
Sbjct: 117 RKKPSEMRARER 128
>gi|31249706|gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica Group]
gi|108708412|gb|ABF96207.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|218192921|gb|EEC75348.1| hypothetical protein OsI_11773 [Oryza sativa Indica Group]
gi|222625002|gb|EEE59134.1| hypothetical protein OsJ_11026 [Oryza sativa Japonica Group]
Length = 217
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/132 (76%), Positives = 113/132 (85%), Gaps = 6/132 (4%)
Query: 2 RGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
RG Y PSPP Y RR RSPSPRGRYGG R RDLPTSLLVRNLR DCRP+D+RRP
Sbjct: 3 RGYDYGPSPPRE-----YRRRARSPSPRGRYGG-RDRDLPTSLLVRNLRRDCRPDDLRRP 56
Query: 62 FEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEEN 121
F +FG +KDIYLPRDYY+GEPRGFGFIQ+ +P+DAA+AK HMDGQ+LLGRE+TVVFAEEN
Sbjct: 57 FGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEEN 116
Query: 122 RKKPSDMRARER 133
RKKPS+MRARER
Sbjct: 117 RKKPSEMRARER 128
>gi|242035637|ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|241919067|gb|EER92211.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|448878340|gb|AGE46133.1| arginine/serine-rich splicing factor SCL25A transcript I [Sorghum
bicolor]
gi|448878342|gb|AGE46134.1| arginine/serine-rich splicing factor SCL25A transcript II [Sorghum
bicolor]
Length = 213
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/163 (64%), Positives = 125/163 (76%), Gaps = 12/163 (7%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
DLPTSLLVRNLR DCRP+D+RRPF +FG +KDIYLP+DYY+ EP+GFGFIQ+ +P+DA++
Sbjct: 34 DLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPKDYYTREPKGFGFIQYFDPEDASD 93
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARS 158
AK HMDGQ+LLGRE+TVVFAEENRKKPSDMRARER GR R R RS P Y+ S
Sbjct: 94 AKYHMDGQMLLGREITVVFAEENRKKPSDMRARERMSGRSRSYD---RRLRSRSPGYSDS 150
Query: 159 P-----SYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPA 196
P S+ +SP P+R++YSRS SP RERS SRSPA
Sbjct: 151 PRGRSRSHSPSHSPAPKRKHYSRSPSPR----PRERSMSRSPA 189
>gi|358248974|ref|NP_001239716.1| uncharacterized protein LOC100816913 [Glycine max]
gi|255645650|gb|ACU23319.1| unknown [Glycine max]
Length = 205
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 120/161 (74%), Gaps = 12/161 (7%)
Query: 25 SPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRG 84
S SPRGRY G RDLPTSLLVRNL DCRPED+ PF QFG +KD+YLPRDYY+GEPRG
Sbjct: 24 SLSPRGRYRGC-DRDLPTSLLVRNLNRDCRPEDLHGPFGQFGPLKDVYLPRDYYTGEPRG 82
Query: 85 FGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPP 144
FGF+Q+V+P DAA+AK HMDG++LLGRE+TVVFAEENRKKP++MRARE RR
Sbjct: 83 FGFVQYVDPADAADAKYHMDGRILLGREITVVFAEENRKKPAEMRARE------HRRDRS 136
Query: 145 PRYSRSPPPRYARSPSYGRDYSPPPRRRNYSRSVSPHGQNY 185
Y RS +R+ S DYSP PRRR + RS+SP + Y
Sbjct: 137 HDYRRS-----SRTYSPSPDYSPSPRRRRHYRSISPRDRKY 172
>gi|357112219|ref|XP_003557907.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Brachypodium
distachyon]
Length = 219
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 130/192 (67%), Gaps = 13/192 (6%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
DLPTSLLVRNLR DCRP+D+RRPF +FG +KDIYLPRDYY+ EPRGFGFIQ+ +P+DAA+
Sbjct: 34 DLPTSLLVRNLRRDCRPDDLRRPFGKFGRLKDIYLPRDYYTQEPRGFGFIQYYDPEDAAD 93
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERG----RGRFRRRSPPPRYSRSPPPR 154
A+ HMDGQ+LLGRE+ VVFAEENRKKP +MR RER R RR P R P
Sbjct: 94 AQYHMDGQILLGREVAVVFAEENRKKPFEMRTRERTSSRGRSYDRRSRSPRRGRSVSPGY 153
Query: 155 YARSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQS 214
RS S + SP P+R+++SRS + RERS+SRSPA R S S RG R
Sbjct: 154 SDRSRSRSQSKSPAPKRKHHSRSPA------HRERSFSRSPADSRSRSGSPSEDRGSR-- 205
Query: 215 WSPSRSRTPKRN 226
SP RT + N
Sbjct: 206 -SPHMQRTTESN 216
>gi|449437540|ref|XP_004136550.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449516345|ref|XP_004165207.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 210
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 149/207 (71%), Gaps = 19/207 (9%)
Query: 1 MRGRSYTPSP-PPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIR 59
MRGRSY+ SP PPR YGRR RSPSPRGR GGR RDLPTSLLVRNLRHDCRPED+R
Sbjct: 1 MRGRSYSYSPSPPRS----YGRRYRSPSPRGR--GGRRRDLPTSLLVRNLRHDCRPEDLR 54
Query: 60 RPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAE 119
F +FG +KDIYLPRDYYSGEPRGFGF+QFV+ DAA+AK +DGQVLLG ELTVVFAE
Sbjct: 55 GLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAE 114
Query: 120 ENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYGRDYSPPPR----RRNYS 175
ENRK+P +MRAR+ RGR S R P RY++SP Y R YS P R+
Sbjct: 115 ENRKRPEEMRARDSSRGRSYSYS-----HRHSPLRYSQSPHYDRKYSRCPEYYSPARSRR 169
Query: 176 RSVSPHGQNYSRERSYSRSPAYDGPRG 202
S SP G Y RE+SYSRSP+ PRG
Sbjct: 170 YSRSPRGPRY-REQSYSRSPS--DPRG 193
>gi|168044871|ref|XP_001774903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673797|gb|EDQ60315.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 127/191 (66%), Gaps = 17/191 (8%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDL-PTSLLVRNLRHDCRPEDIR 59
MRGRS PPR S GG G R RSPSPRG GG P+SLLVRN+ DC ED+R
Sbjct: 1 MRGRSPLGHSPPRRSHGG-GNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRDCSAEDLR 59
Query: 60 RPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAE 119
PFE++G +KD+YLPRDYY+G+PRGFGF+QF+EP DAAEA+ +D Q++ GRE+TVVFAE
Sbjct: 60 IPFERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDAAEAQYCLDHQLIQGREITVVFAE 119
Query: 120 ENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRNYSRSVS 179
ENRKKP +MR +ER R RSP P + P +RSPS R + RRR RS
Sbjct: 120 ENRKKPQEMRTKERIRP---ARSPSPGRENNAP---SRSPSAVRSH----RRRTGERSPM 169
Query: 180 PHGQNYSRERS 190
P SRERS
Sbjct: 170 P-----SRERS 175
>gi|448878427|gb|AGE46176.1| arginine/serine-rich splicing factor SCL42 transcript I
[Physcomitrella patens subsp. patens]
Length = 370
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 102/134 (76%), Gaps = 2/134 (1%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDL-PTSLLVRNLRHDCRPEDIR 59
MRGRS PPR S GG G R RSPSPRG GG P+SLLVRN+ DC ED+R
Sbjct: 1 MRGRSPLGHSPPRRSHGG-GNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRDCSAEDLR 59
Query: 60 RPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAE 119
PFE++G +KD+YLPRDYY+G+PRGFGF+QF+EP DAAEA+ +D Q++ GRE+TVVFAE
Sbjct: 60 IPFERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDAAEAQYCLDHQLIQGREITVVFAE 119
Query: 120 ENRKKPSDMRARER 133
ENRKKP +MR +ER
Sbjct: 120 ENRKKPQEMRTKER 133
>gi|116782736|gb|ABK22635.1| unknown [Picea sitchensis]
Length = 275
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 129/203 (63%), Gaps = 24/203 (11%)
Query: 18 GYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDY 77
GYG R RSP G G R+ TSLLVRN+ DCR +++R PFE+FG +KD+YLP+D+
Sbjct: 12 GYGVRARSPPRGRYGGYGGRREPNTSLLVRNIPRDCRSDELRMPFERFGPLKDVYLPKDF 71
Query: 78 YSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARE----- 132
Y+GEPRGFGF+QF++P DAAEA+ HMDGQ + GRE+TVV AE+NRKKP +MR R
Sbjct: 72 YTGEPRGFGFVQFMDPQDAAEAQYHMDGQYIGGREITVVLAEKNRKKPDEMRVRTSARAP 131
Query: 133 RGRGRFRRRSPPPRYSRSPPPRYA---RSPSY-----GRDYSPPPRRRNYSRSVSPHGQN 184
RG GR RRRS P Y+RS + RS SY R YSP P RR + SVSP ++
Sbjct: 132 RGYGR-RRRS--PHYARSRSRSRSLEHRSTSYRGGHRSRSYSPVP-RRGHDYSVSPRDRH 187
Query: 185 YSRERSYSRSPAYDGPRGRSRSP 207
+ RSP R R R P
Sbjct: 188 H-------RSPTNSHDRDRGRLP 203
>gi|448878421|gb|AGE46173.1| arginine/serine-rich splicing factor SCL33 transcript I
[Physcomitrella patens subsp. patens]
Length = 286
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 79/93 (84%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
PTSLLVRN+ DC +D+R PFE++G +KD+YLPRDYY+G PRGFGF+QF+EP DAAEA+
Sbjct: 55 PTSLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQ 114
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+D Q++ GRE+TVVFAEENRKKP +MR +ER
Sbjct: 115 YCLDHQLIAGREITVVFAEENRKKPQEMRIKER 147
>gi|168056094|ref|XP_001780057.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668555|gb|EDQ55160.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 79/93 (84%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
PTSLLVRN+ DC +D+R PFE++G +KD+YLPRDYY+G PRGFGF+QF+EP DAAEA+
Sbjct: 55 PTSLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQ 114
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+D Q++ GRE+TVVFAEENRKKP +MR +ER
Sbjct: 115 YCLDHQLIAGREITVVFAEENRKKPQEMRIKER 147
>gi|448878423|gb|AGE46174.1| arginine/serine-rich splicing factor SCL33 transcript II
[Physcomitrella patens subsp. patens]
Length = 248
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 79/93 (84%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
PTSLLVRN+ DC +D+R PFE++G +KD+YLPRDYY+G PRGFGF+QF+EP DAAEA+
Sbjct: 55 PTSLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQ 114
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+D Q++ GRE+TVVFAEENRKKP +MR +ER
Sbjct: 115 YCLDHQLIAGREITVVFAEENRKKPQEMRIKER 147
>gi|326504506|dbj|BAJ91085.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508622|dbj|BAJ95833.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 118/187 (63%), Gaps = 21/187 (11%)
Query: 28 PRGRYGGG---RGRD---LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGE 81
PR RY G RG D PT LLVRN+ R EDIR PFEQFG IKD+YLPR++++ E
Sbjct: 36 PRDRYRAGPPRRGYDRPSAPTGLLVRNISLTARLEDIRGPFEQFGPIKDVYLPRNFHTKE 95
Query: 82 PRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGR---GRF 138
RGFGF++F P+DAA AK+ M+ QV+ GRE+T+VFAEENRK P +MR R R R G +
Sbjct: 96 LRGFGFVKFRHPEDAAYAKQEMNHQVICGREITIVFAEENRKTPQEMRFRTRSRHMDGNY 155
Query: 139 RRRSPPPRYSRSPPPRYARSPSYGRDYSPPPR----RRNYS--RSVSPHGQNYSRERSYS 192
RRR SRSP PRY PSY + SP + R NYS S SP ++ + S
Sbjct: 156 RRRQ---SMSRSPRPRY---PSYSPEPSPVRQNSRDRDNYSPRGSYSPPTRDKRQHISDC 209
Query: 193 RSPAYDG 199
RSP+ DG
Sbjct: 210 RSPSLDG 216
>gi|116793427|gb|ABK26743.1| unknown [Picea sitchensis]
Length = 252
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 79/96 (82%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
LPT LLVRN+ D RPED+R PFE+FG +KD+YLP+++Y+ EPRGFGF+++ DDAAEA
Sbjct: 53 LPTGLLVRNISLDARPEDLRIPFERFGPVKDVYLPKNFYTREPRGFGFVKYRNHDDAAEA 112
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGR 135
KRHM+ QV+ GRE+++VFAEENRK P +MRA R R
Sbjct: 113 KRHMNHQVIGGREISIVFAEENRKNPQEMRATARVR 148
>gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica Group]
Length = 289
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 81/103 (78%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEP 93
GGR SLLVRN+ CR ED+R PFE+FG ++D+YLP+DYY+GEPRGF F++FV+P
Sbjct: 53 GGRKEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDP 112
Query: 94 DDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
DA+EA+ HM+ QV+ GRE+TVV A E+RK+P +MR+R R RG
Sbjct: 113 YDASEAQYHMNRQVVFGREITVVLAAESRKRPEEMRSRARVRG 155
>gi|222622536|gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa Japonica Group]
Length = 304
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 81/103 (78%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEP 93
GGR SLLVRN+ CR ED+R PFE+FG ++D+YLP+DYY+GEPRGF F++FV+P
Sbjct: 68 GGRKEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDP 127
Query: 94 DDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
DA+EA+ HM+ QV+ GRE+TVV A E+RK+P +MR+R R RG
Sbjct: 128 YDASEAQYHMNRQVVFGREITVVLAAESRKRPEEMRSRARVRG 170
>gi|115445337|ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor [Oryza sativa]
gi|113535979|dbj|BAF08362.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|215704460|dbj|BAG93894.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 81/103 (78%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEP 93
GGR SLLVRN+ CR ED+R PFE+FG ++D+YLP+DYY+GEPRGF F++FV+P
Sbjct: 29 GGRKEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDP 88
Query: 94 DDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
DA+EA+ HM+ QV+ GRE+TVV A E+RK+P +MR+R R RG
Sbjct: 89 YDASEAQYHMNRQVVFGREITVVLAAESRKRPEEMRSRARVRG 131
>gi|225449547|ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258210 [Vitis vinifera]
Length = 276
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 78/94 (82%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVRN+ +CRPED+R PFE+FG ++D+YLP+DYY+GEPRGF F+QFV+P +A+EA+ H
Sbjct: 41 SLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYH 100
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
M+GQ+ GRE++VV A E RK+P +MR R R RG
Sbjct: 101 MNGQIFAGREISVVVAAETRKRPEEMRTRARVRG 134
>gi|302760651|ref|XP_002963748.1| hypothetical protein SELMODRAFT_79810 [Selaginella moellendorffii]
gi|300169016|gb|EFJ35619.1| hypothetical protein SELMODRAFT_79810 [Selaginella moellendorffii]
Length = 100
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Query: 52 DC-RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLG 110
DC RPED+R PFEQFG IKD+YLP+D+Y+GEPRGFGF+Q++ P+DAA AK HMD QVL G
Sbjct: 3 DCHRPEDVRGPFEQFGHIKDVYLPKDFYTGEPRGFGFVQYMNPEDAARAKHHMDRQVLGG 62
Query: 111 RELTVVFAEENRKKPSDMRARERGRGRFRRRSP 143
RE+TVVFAEENRKKPS+MR + R R F P
Sbjct: 63 REITVVFAEENRKKPSEMRMKSRVRSVFDHVFP 95
>gi|224098431|ref|XP_002311171.1| predicted protein [Populus trichocarpa]
gi|222850991|gb|EEE88538.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 93/140 (66%), Gaps = 7/140 (5%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVRN+ DCRPE++R FE+FG ++D+Y+P+DY++GEPRGFGF+QFVEP DA EA+ H
Sbjct: 45 SLLVRNIPRDCRPEELRGMFERFGVVRDVYIPKDYHTGEPRGFGFVQFVEPSDAMEAQHH 104
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRG-------RFRRRSPPPRYSRSPPPRY 155
M+GQV GR++ VV A E RK+P +MR R R RG R R P Y
Sbjct: 105 MNGQVFAGRQMFVVVAAETRKRPEEMRHRTRVRGPADHGGRSSYSRRSRSRSFSRSPRHY 164
Query: 156 ARSPSYGRDYSPPPRRRNYS 175
S S R YSP P+RR+YS
Sbjct: 165 HVSRSRYRSYSPAPQRRDYS 184
>gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 78/94 (82%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVRN+ +CRPED+R PFE+FG ++D+YLP+DYY+GEPRGF F+QFV+P +A+EA+ H
Sbjct: 118 SLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYH 177
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
M+GQ+ GRE++VV A E RK+P +MR R R RG
Sbjct: 178 MNGQIFAGREISVVVAAETRKRPEEMRTRARVRG 211
>gi|218187112|gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
Length = 263
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 80/103 (77%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEP 93
GGR SLLVRN+ CR ED+R PFE+FG ++D+YLP+DYYSGEPRGF F++FV+P
Sbjct: 29 GGRREQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDP 88
Query: 94 DDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
DA+EA+ HM+ QV GRE+TVV A E+RK+P +MR+R R RG
Sbjct: 89 YDASEAQYHMNRQVFFGREITVVLAAESRKRPEEMRSRARVRG 131
>gi|115489208|ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|77556878|gb|ABA99674.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649598|dbj|BAF30110.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|215694562|dbj|BAG89555.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617335|gb|EEE53467.1| hypothetical protein OsJ_36595 [Oryza sativa Japonica Group]
Length = 263
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 80/103 (77%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEP 93
GGR SLLVRN+ CR ED+R PFE+FG ++D+YLP+DYYSGEPRGF F++FV+P
Sbjct: 29 GGRREQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDP 88
Query: 94 DDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
DA+EA+ HM+ QV GRE+TVV A E+RK+P +MR+R R RG
Sbjct: 89 YDASEAQYHMNRQVFFGREITVVLAAESRKRPEEMRSRARVRG 131
>gi|225451102|ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
gi|298205010|emb|CBI34317.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 76/97 (78%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
P+ LLVRN+ D RPED+R PFE+FG +KD+YLP++YY+GEPRGFGF++F +DAAEAK
Sbjct: 43 PSGLLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAK 102
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGR 137
H++ V+ GRE+ +VFAEENRK P +MR R GR
Sbjct: 103 HHLNHSVIGGREIAIVFAEENRKTPQEMRTNSRVSGR 139
>gi|357160417|ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826288 [Brachypodium
distachyon]
Length = 295
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 79/103 (76%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEP 93
GGR SLLVRN+ R ED+R PFE+FG ++D+YLP+DYYSGEPRGF F++FV+P
Sbjct: 57 GGRKEQGSGSLLVRNIPLSARAEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDP 116
Query: 94 DDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
DA+EA+ HM+ QV GRE+TVV A E+RK+P DMR+R R RG
Sbjct: 117 YDASEAQYHMNRQVFFGREITVVLAAESRKRPEDMRSRTRIRG 159
>gi|302786120|ref|XP_002974831.1| hypothetical protein SELMODRAFT_102070 [Selaginella moellendorffii]
gi|300157726|gb|EFJ24351.1| hypothetical protein SELMODRAFT_102070 [Selaginella moellendorffii]
Length = 95
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 74/90 (82%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGREL 113
RPED+R PFEQFG IKD+YLP+D+Y+GEPRGFGF+Q++ P+DAA AK HMD QVL GRE+
Sbjct: 1 RPEDVRGPFEQFGHIKDVYLPKDFYTGEPRGFGFVQYMNPEDAARAKHHMDRQVLGGREI 60
Query: 114 TVVFAEENRKKPSDMRARERGRGRFRRRSP 143
TVVFAEENRKKPS+MR + R R F P
Sbjct: 61 TVVFAEENRKKPSEMRMKSRVRSVFDHVFP 90
>gi|356553842|ref|XP_003545260.1| PREDICTED: uncharacterized protein LOC100792397 [Glycine max]
Length = 271
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 76/93 (81%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SLLVRN+ DCRPE++R PFE+FG ++D+Y+P+DYYSGEPRGF F+QFV+P DA+E
Sbjct: 37 DSNGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASE 96
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRAR 131
A+ HM+ Q+ GRE++VV AEE RK+P +MR R
Sbjct: 97 AQYHMNRQIFAGREISVVVAEETRKRPEEMRHR 129
>gi|32352198|dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica Group]
Length = 232
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 77/94 (81%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVRN+ CR ED+R PFE+FG ++D+YLP+DYYSGEPRGF F++FV+P DA+EA+ H
Sbjct: 7 SLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYH 66
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
M+ QV GRE+TVV A E+RK+P +MR+R R RG
Sbjct: 67 MNRQVFFGREITVVLAAESRKRPEEMRSRARVRG 100
>gi|356499101|ref|XP_003518382.1| PREDICTED: uncharacterized protein LOC100804294 [Glycine max]
Length = 276
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 76/93 (81%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SLLVRN+ DCRPE++R PFE+FG ++D+Y+P+DYYSGEPRGF F+QFV+P DA+E
Sbjct: 44 DSNGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASE 103
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRAR 131
A+ HM+ Q+ GRE++VV AEE RK+P +MR R
Sbjct: 104 AQYHMNRQIFAGREISVVVAEETRKRPEEMRHR 136
>gi|302782525|ref|XP_002973036.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
gi|302805506|ref|XP_002984504.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300147892|gb|EFJ14554.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300159637|gb|EFJ26257.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
Length = 93
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 79/92 (85%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
PTSLLVRN+ D R +D+R PFE++GA+KD+YLP+D+YSGEPRGFGF+QF++P DA EA+
Sbjct: 2 PTSLLVRNISRDTRADDLRGPFERYGAVKDVYLPKDFYSGEPRGFGFVQFIDPRDAIEAQ 61
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
M+ Q++ GRE++VVFAEE RKKP++MR +E
Sbjct: 62 YKMNHQLIRGREVSVVFAEETRKKPAEMRMKE 93
>gi|448878226|gb|AGE46076.1| arginine/serine-rich splicing factor SCL30 transcript II [Zea mays]
Length = 259
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 98/155 (63%), Gaps = 21/155 (13%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVRN+ R ED+R PFE+FG ++D+Y+P+DYYSGEPRGF F++FV+P DA+EA+ H
Sbjct: 39 SLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYH 98
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRG----RFRRRS-------------PPP 145
M+ QV GRE+ VV A E+RK+P +MR+R R RG RR S P
Sbjct: 99 MNRQVFFGREIAVVLAAESRKRPEEMRSRTRVRGYSGHEGRRSSYYGRSRSRSPRYRGRP 158
Query: 146 RYSRSPPPRYARSPSYGRDYSPPPRRRNYSRSVSP 180
R SRS Y+ +P G DYS PRR+ RS P
Sbjct: 159 RSSRS----YSPAPRRGNDYSASPRRQEAHRSSPP 189
>gi|125543974|gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 103/170 (60%), Gaps = 19/170 (11%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
PT LLVRN+ RPEDIR PFEQFG +KD+YLPR++++ E RGFGF++F P+DAA AK
Sbjct: 60 PTGLLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAK 119
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFR------------RRSPPPRYS 148
+ ++ QV+ GRE+++VFAEENRK P +MR R R GR+ RS YS
Sbjct: 120 QELNHQVIGGREISIVFAEENRKTPQEMRMRTRTSGRYMDGSHRRRSVSRSPRSRYHSYS 179
Query: 149 RSPPPRYARSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYD 198
SP P + DYSP S+SPHGQ+ RS RS + D
Sbjct: 180 PSPSPARRDYRDHRDDYSP-------GESLSPHGQDKRHHRSNGRSASPD 222
>gi|125586354|gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 103/170 (60%), Gaps = 19/170 (11%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
PT LLVRN+ RPEDIR PFEQFG +KD+YLPR++++ E RGFGF++F P+DAA AK
Sbjct: 60 PTGLLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAK 119
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPR------------YS 148
+ ++ QV+ GRE+++VFAEENRK P +MR R R GR+ S R YS
Sbjct: 120 QELNHQVIGGREISIVFAEENRKTPQEMRMRTRTSGRYMDGSHRRRSVSRSPRSRYHSYS 179
Query: 149 RSPPPRYARSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYD 198
SP P + DYSP S+SPHGQ+ RS RS + D
Sbjct: 180 PSPSPARRDYRDHRDDYSP-------GESLSPHGQDKRHHRSNGRSASPD 222
>gi|115453135|ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|215737124|dbj|BAG96053.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 103/170 (60%), Gaps = 19/170 (11%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
PT LLVRN+ RPEDIR PFEQFG +KD+YLPR++++ E RGFGF++F P+DAA AK
Sbjct: 60 PTGLLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAK 119
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPR------------YS 148
+ ++ QV+ GRE+++VFAEENRK P +MR R R GR+ S R YS
Sbjct: 120 QELNHQVIGGREISIVFAEENRKTPQEMRMRTRTSGRYMDGSHRRRSVSRSPRSRYHSYS 179
Query: 149 RSPPPRYARSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYD 198
SP P + DYSP S+SPHGQ+ RS RS + D
Sbjct: 180 PSPSPARRDYRDHRDDYSP-------GESLSPHGQDKRHHRSNGRSASPD 222
>gi|253760757|ref|XP_002489004.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
gi|241947359|gb|EES20504.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
Length = 208
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 80/103 (77%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEP 93
GGR ++ SLLVRN+ R E++R PFE+FG ++D+Y+P+DYYSGEPRGF F++FV+P
Sbjct: 83 GGRNKEGSGSLLVRNIPLSVRAEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDP 142
Query: 94 DDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
DA+EA+ HM+ QV GRE+ VV A E+RK+P +MR+R R RG
Sbjct: 143 YDASEAQYHMNRQVFFGREIAVVLAAESRKRPEEMRSRARVRG 185
>gi|449459926|ref|XP_004147697.1| PREDICTED: uncharacterized protein LOC101221788 [Cucumis sativus]
Length = 286
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 75/91 (82%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVRN+ DCRPE++R PFE+FG ++D+Y+P+DYY+GEPRGF F++FV+P +A+EA+ H
Sbjct: 52 SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH 111
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARER 133
M+G+ GRE+TVV A E+RK+P MR R R
Sbjct: 112 MNGKKFAGREITVVLAAESRKRPEQMRQRSR 142
>gi|226492712|ref|NP_001150206.1| LOC100283836 [Zea mays]
gi|195637558|gb|ACG38247.1| SR repressor protein [Zea mays]
Length = 258
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 75/94 (79%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVRN+ R ED+R PFE+FG ++D+Y+P+DYYSGEPRGF F++FV+P DA+EA+ H
Sbjct: 39 SLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYH 98
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
M+ QV GRE+ VV A E+RK+P +MR+R R RG
Sbjct: 99 MNRQVFFGREIAVVLAAESRKRPEEMRSRTRVRG 132
>gi|194699092|gb|ACF83630.1| unknown [Zea mays]
gi|448878224|gb|AGE46075.1| arginine/serine-rich splicing factor SCL30 transcript I [Zea mays]
Length = 258
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 75/94 (79%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVRN+ R ED+R PFE+FG ++D+Y+P+DYYSGEPRGF F++FV+P DA+EA+ H
Sbjct: 39 SLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYH 98
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
M+ QV GRE+ VV A E+RK+P +MR+R R RG
Sbjct: 99 MNRQVFFGREIAVVLAAESRKRPEEMRSRTRVRG 132
>gi|224112763|ref|XP_002316285.1| predicted protein [Populus trichocarpa]
gi|222865325|gb|EEF02456.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 76/94 (80%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVRN+ DCRP+++R PFE+FG ++D+Y+P+DYY+GEPRGF F+QFV+P +A EA+
Sbjct: 7 SLLVRNIPLDCRPDELRGPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDPYEAMEAQHR 66
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
M+GQ+ GR+++VV A E RK+P +MR R R RG
Sbjct: 67 MNGQIFAGRQISVVLAAETRKRPEEMRHRARVRG 100
>gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223527045|gb|EEF29231.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 265
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 73/91 (80%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVRN+ DCRPE++R PFE+FG ++D+Y+P+DYY+GEPRGF F+QFV+ DA EA+
Sbjct: 44 SLLVRNIPLDCRPEELRAPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDTYDAMEAQHR 103
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARER 133
M+GQ+ GRE++VV A E RK+P +MR R R
Sbjct: 104 MNGQIFAGREISVVVAAETRKRPEEMRQRSR 134
>gi|449524006|ref|XP_004169014.1| PREDICTED: uncharacterized protein LOC101227075 [Cucumis sativus]
Length = 305
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 75/91 (82%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVRN+ DCRPE++R PFE+FG ++D+Y+P+DYY+GEPRGF F++FV+P +A+EA+ H
Sbjct: 54 SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH 113
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARER 133
M+G+ GRE+TVV A E+RK+P MR R R
Sbjct: 114 MNGKKFAGREITVVLAAESRKRPEQMRQRSR 144
>gi|302760313|ref|XP_002963579.1| hypothetical protein SELMODRAFT_8343 [Selaginella moellendorffii]
gi|302799491|ref|XP_002981504.1| hypothetical protein SELMODRAFT_8339 [Selaginella moellendorffii]
gi|300150670|gb|EFJ17319.1| hypothetical protein SELMODRAFT_8339 [Selaginella moellendorffii]
gi|300168847|gb|EFJ35450.1| hypothetical protein SELMODRAFT_8343 [Selaginella moellendorffii]
Length = 79
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 71/78 (91%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGREL 113
RPE++R PFE+FG +KD+YLP+DYYSGEPRGFGF+QF+EP DAA+AK +MD Q+L GRE+
Sbjct: 2 RPEEVRVPFEKFGPVKDVYLPKDYYSGEPRGFGFVQFIEPGDAADAKFNMDHQLLGGREI 61
Query: 114 TVVFAEENRKKPSDMRAR 131
TVVFAEENRKKPS+MR +
Sbjct: 62 TVVFAEENRKKPSEMRIK 79
>gi|255551589|ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 82/108 (75%), Gaps = 4/108 (3%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
P+ LLVRNL D RPED+R PFE++G +KD+YLP++YY+GEPRGFGF+++ +DAAEAK
Sbjct: 51 PSGLLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAK 110
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF----RRRSPP 144
+ M+ +++ GRE+ +V+AEENRK P +MR R GR R R+PP
Sbjct: 111 QRMNHKIIGGREIRIVYAEENRKTPQEMRTTARVSGRHGGSTRGRTPP 158
>gi|108708313|gb|ABF96108.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 238
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 77/98 (78%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
PT LLVRN+ RPEDIR PFEQFG +KD+YLPR++++ E RGFGF++F P+DAA AK
Sbjct: 60 PTGLLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAK 119
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF 138
+ ++ QV+ GRE+++VFAEENRK P +MR R R GR+
Sbjct: 120 QELNHQVIGGREISIVFAEENRKTPQEMRMRTRTSGRY 157
>gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
gi|241937164|gb|EES10309.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
Length = 270
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRN+ CRPE++R PFE+FG ++D+YLPRDY++GEPRGFGF++FV+ DA+EA+
Sbjct: 40 VSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQY 99
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
HM+ Q+ GRE+TVV A + RK+P DMR R RG
Sbjct: 100 HMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRG 134
>gi|448878332|gb|AGE46129.1| arginine/serine-rich splicing factor SCL31 [Sorghum bicolor]
Length = 270
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRN+ CRPE++R PFE+FG ++D+YLPRDY++GEPRGFGF++FV+ DA+EA+
Sbjct: 40 VSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQY 99
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
HM+ Q+ GRE+TVV A + RK+P DMR R RG
Sbjct: 100 HMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRG 134
>gi|194700364|gb|ACF84266.1| unknown [Zea mays]
Length = 267
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRN+ CRPE++R PFE+FG ++D+YLPRDY++GEPRGFGF++FV+ DA+EA+
Sbjct: 38 VSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQY 97
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
HM+ Q+ GRE+TVV A + RK+P DMR R RG
Sbjct: 98 HMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRG 132
>gi|194706612|gb|ACF87390.1| unknown [Zea mays]
Length = 269
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRN+ CRPE++R PFE+FG ++D+YLPRDY++GEPRGFGF++FV+ DA+EA+
Sbjct: 38 VSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQY 97
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
HM+ Q+ GRE+TVV A + RK+P DMR R RG
Sbjct: 98 HMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRG 132
>gi|357492235|ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355517741|gb|AES99364.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 286
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 73/89 (82%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVRN+ DCRPE++R PFE+FG ++D+Y+P+DYYSG+PRGF F+QFV+ +A+EA+ H
Sbjct: 48 SLLVRNIPLDCRPEELRAPFERFGPVRDVYIPKDYYSGQPRGFAFVQFVDAYEASEAQYH 107
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRAR 131
MD Q+ GRE++VV A E RK+P +MR R
Sbjct: 108 MDRQIFAGREISVVVAAETRKRPEEMRHR 136
>gi|363543465|ref|NP_001241742.1| SR repressor protein [Zea mays]
gi|195625068|gb|ACG34364.1| SR repressor protein [Zea mays]
Length = 269
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRN+ CRPE++R PFE+FG ++D YLPRDY++GEPRGFGF++FV+ DA+EA+
Sbjct: 38 VSLLVRNIPLRCRPEELRVPFERFGPVRDFYLPRDYHTGEPRGFGFVEFVDAYDASEAQY 97
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
HM+ Q+ GRE+TVV A + RK+P DMR R RG
Sbjct: 98 HMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRG 132
>gi|297816842|ref|XP_002876304.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
gi|297322142|gb|EFH52563.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 75/94 (79%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
LLVRN+ DCRPE++R PFE+FG ++D+Y+PRDYYSGEPRGF F++FV+ DA EA+R M
Sbjct: 48 LLVRNIPLDCRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSM 107
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGRGR 137
+ ++ GRE+TVV A E+RK+P +MR + R R R
Sbjct: 108 NRRIFAGREITVVVASESRKRPEEMRVKTRTRSR 141
>gi|357478559|ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510620|gb|AES91762.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 314
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 74/91 (81%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
LP+ LLVRNL D RPED+R PFE++G +KD+YLPR+YY+GEPRGFGF+++ +DAAEA
Sbjct: 46 LPSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEA 105
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRA 130
K+ ++ ++ GRE+ +VFAEENRK P +MR
Sbjct: 106 KQQLNHTIIGGREIRIVFAEENRKTPQEMRV 136
>gi|448878334|gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
LL+RN+ RPEDIR PFEQFG IKD+YLPR++++ E RGFGF++F P+DAA AK+ M
Sbjct: 59 LLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEM 118
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF 138
+ QV+ GRE+++V+AEENRK P +MR R R GR+
Sbjct: 119 NHQVIGGREISIVYAEENRKTPQEMRRRTRTSGRY 153
>gi|449432785|ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 80/109 (73%), Gaps = 5/109 (4%)
Query: 27 SPRGRYGGGRG-RD----LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGE 81
PR RY R RD P+ LLVRNL D RPED+R PFE+FG +KD+YLP++YY+GE
Sbjct: 30 DPRDRYRESRSHRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGE 89
Query: 82 PRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRA 130
PRGFGF++F +DAAEAK+ ++ V+ GRE+ +VFAEENRK P +MR
Sbjct: 90 PRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRV 138
>gi|224107319|ref|XP_002314444.1| predicted protein [Populus trichocarpa]
gi|222863484|gb|EEF00615.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 88/123 (71%), Gaps = 11/123 (8%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+ LL+RNL D RPED+R PFE+FG +KDIYLP++Y++GEPRGFGF+++ +DAAEAK+
Sbjct: 48 SGLLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKK 107
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM----RARERGRGRFRRRSPP--PR-----YSRS 150
MD +++ GRE+ +VFAEENRK P +M R +R G R+PP PR YSRS
Sbjct: 108 RMDHKIIGGREIRIVFAEENRKTPQEMRRTPRTSDRHGGSHGGRTPPRSPRHRYRSYSRS 167
Query: 151 PPP 153
P P
Sbjct: 168 PSP 170
>gi|118484981|gb|ABK94355.1| unknown [Populus trichocarpa]
Length = 252
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 88/123 (71%), Gaps = 11/123 (8%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+ LL+RNL D RPED+R PFE+FG +KDIYLP++Y++GEPRGFGF+++ +DAAEAK+
Sbjct: 48 SGLLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKK 107
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM----RARERGRGRFRRRSPP--PR-----YSRS 150
MD +++ GRE+ +VFAEENRK P +M R +R G R+PP PR YSRS
Sbjct: 108 RMDHKIIGGREIRIVFAEENRKTPQEMRRTPRTSDRHGGSHGGRTPPRSPRHRYRSYSRS 167
Query: 151 PPP 153
P P
Sbjct: 168 PSP 170
>gi|224102541|ref|XP_002312718.1| predicted protein [Populus trichocarpa]
gi|222852538|gb|EEE90085.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 73/89 (82%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
P+ LL+RNL D RPED+RR FE+FG +KDIYLP++YY+GEPRGFGF+++ +DAAEAK
Sbjct: 39 PSGLLIRNLPLDARPEDLRRSFEKFGPLKDIYLPKNYYTGEPRGFGFVKYRHSEDAAEAK 98
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMR 129
+ MD + + GRE+ +VFAEENRK P +MR
Sbjct: 99 QRMDHKTIGGREIRIVFAEENRKTPQEMR 127
>gi|224031575|gb|ACN34863.1| unknown [Zea mays]
Length = 240
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
LL+RN+ RPEDIR FEQFG IKD+YLPR++++ E RGFGF++F P+DAA AKR M
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF 138
QV+ GRE+++V+AEENRK P +MR R R GR+
Sbjct: 119 HHQVIGGREISIVYAEENRKTPQEMRMRTRTSGRY 153
>gi|242040845|ref|XP_002467817.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
gi|241921671|gb|EER94815.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
Length = 190
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
LL+RN+ RPEDIR PFEQFG IKD+YLPR++++ E RGFGF++F P+DAA AK+ M
Sbjct: 59 LLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEM 118
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF 138
+ QV+ GRE+++V+AEENRK P +MR R R GR+
Sbjct: 119 NHQVIGGREISIVYAEENRKTPQEMRRRTRTSGRY 153
>gi|255639915|gb|ACU20250.1| unknown [Glycine max]
Length = 270
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 89/127 (70%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
LP+ LLVRNL D RPED+R PFE++G +KD+YLP++YY+GEPRGFGF+++ +DAAEA
Sbjct: 47 LPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEA 106
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSP 159
K+H++ ++ GRE+ +VFAEENRK +MR RG GR R P Y+RSP
Sbjct: 107 KQHLNHTIIGGREIRIVFAEENRKTSQEMRVNTRGSGRHGGGRRRNRTRSPRPRSYSRSP 166
Query: 160 SYGRDYS 166
S RD S
Sbjct: 167 SPARDDS 173
>gi|448878234|gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transcript III [Zea
mays]
Length = 232
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
LL+RN+ RPEDIR FEQFG IKD+YLPR++++ E RGFGF++F P+DAA AKR M
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF 138
QV+ GRE+++V+AEENRK P +MR R R GR+
Sbjct: 119 HHQVIGGREISIVYAEENRKTPQEMRMRTRTSGRY 153
>gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
gi|20466366|gb|AAM20500.1| putative RNA binding protein [Arabidopsis thaliana]
gi|21554261|gb|AAM63336.1| putative RNA binding protein [Arabidopsis thaliana]
gi|22136316|gb|AAM91236.1| putative RNA binding protein [Arabidopsis thaliana]
gi|332645866|gb|AEE79387.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
Length = 262
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 74/94 (78%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
LLVRN+ DCRPE++R PFE+FG ++D+Y+PRDYYSG+PRGF F++FV+ DA EA+R M
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGRGR 137
+ + GRE+TVV A E+RK+P +MR + R R R
Sbjct: 109 NRRSFAGREITVVVASESRKRPEEMRVKTRTRSR 142
>gi|357112195|ref|XP_003557895.1| PREDICTED: uncharacterized protein LOC100829528 [Brachypodium
distachyon]
Length = 244
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 109/178 (61%), Gaps = 7/178 (3%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
PT LLVRN+ R EDIR PFEQFG IKD+YLPR++++ E RGFGF++F +DAA AK
Sbjct: 57 PTGLLVRNISLTARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRYSEDAAYAK 116
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGR----FRRRSPPPRYSRSPPPRYA 156
+ ++ QV+ GRE+++VFAEENRK P +MR R R GR +RRR R RS P Y+
Sbjct: 117 QELNHQVICGREISIVFAEENRKTPQEMRFRTRTGGRHDGNYRRRRSLSRSPRSRYPSYS 176
Query: 157 RSPSYGRDYS-PPPRRRNYS--RSVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQ 211
PS R +S R YS S SPH ++ RS RSP+ DG + H G
Sbjct: 177 PEPSPVRRHSRDRGDREKYSPGGSHSPHARDKGHYRSNGRSPSPDGQERQISPSHNGH 234
>gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidopsis thaliana]
Length = 262
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 74/94 (78%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
LLVRN+ DCRPE++R PFE+FG ++D+Y+PRDYYSG+PRGF F++FV+ DA EA+R M
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGRGR 137
+ + GRE+TVV A E+RK+P +MR + R R R
Sbjct: 109 NRRSFSGREITVVVASESRKRPEEMRVKTRTRSR 142
>gi|357478561|ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510621|gb|AES91763.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 192
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 74/91 (81%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
LP+ LLVRNL D RPED+R PFE++G +KD+YLPR+YY+GEPRGFGF+++ +DAAEA
Sbjct: 46 LPSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEA 105
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRA 130
K+ ++ ++ GRE+ +VFAEENRK P +MR
Sbjct: 106 KQQLNHTIIGGREIRIVFAEENRKTPQEMRV 136
>gi|226504024|ref|NP_001140489.1| uncharacterized protein LOC100272550 [Zea mays]
gi|194699696|gb|ACF83932.1| unknown [Zea mays]
gi|448878232|gb|AGE46079.1| arginine/serine-rich splicing factor SCL28 transcript II [Zea mays]
Length = 188
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
LL+RN+ RPEDIR FEQFG IKD+YLPR++++ E RGFGF++F P+DAA AKR M
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF 138
QV+ GRE+++V+AEENRK P +MR R R GR+
Sbjct: 119 HHQVIGGREISIVYAEENRKTPQEMRMRTRTSGRY 153
>gi|448878336|gb|AGE46131.1| arginine/serine-rich splicing factor SCL28 transcript II [Sorghum
bicolor]
Length = 190
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 75/95 (78%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
LL+R++ RPEDIR PFEQFG IKD+YLPR++++ E RGFGF++F P+DAA AK+ M
Sbjct: 59 LLIRDISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEM 118
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF 138
+ QV+ GRE+++V+AEENRK P +MR R R GR+
Sbjct: 119 NHQVIGGREISIVYAEENRKTPQEMRRRTRTSGRY 153
>gi|116831499|gb|ABK28702.1| unknown [Arabidopsis thaliana]
Length = 237
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 73/97 (75%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
P+ LL+RNL D RP D+R FE+FG +KDIYLPR+YY+GEPRGFGF+++ +DAAEA
Sbjct: 46 PSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAM 105
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGR 137
+ M+ +V+ GRE+ +VFAEENRK P +MR GR
Sbjct: 106 KRMNHKVIGGREIAIVFAEENRKTPQEMRTTNGTSGR 142
>gi|30687014|ref|NP_197382.3| SC35-like splicing factor 28 [Arabidopsis thaliana]
gi|91806878|gb|ABE66166.1| 28 kDa SC35-like splicing factor [Arabidopsis thaliana]
gi|332005232|gb|AED92615.1| SC35-like splicing factor 28 [Arabidopsis thaliana]
Length = 236
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 73/97 (75%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
P+ LL+RNL D RP D+R FE+FG +KDIYLPR+YY+GEPRGFGF+++ +DAAEA
Sbjct: 46 PSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAM 105
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGR 137
+ M+ +V+ GRE+ +VFAEENRK P +MR GR
Sbjct: 106 KRMNHKVIGGREIAIVFAEENRKTPQEMRTTNGTSGR 142
>gi|388503430|gb|AFK39781.1| unknown [Medicago truncatula]
Length = 336
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 73/91 (80%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
LP+ LLVRNL D RPED+R PFE++G +KD+YLPR+YY+GEPRGFGF+++ +DAA A
Sbjct: 46 LPSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAGA 105
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRA 130
K+ ++ ++ GRE+ +VFAEENRK P +MR
Sbjct: 106 KQQLNHTIIGGREIRIVFAEENRKTPQEMRV 136
>gi|26452521|dbj|BAC43345.1| putative Serine/arginine rich protein [Arabidopsis thaliana]
Length = 236
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 72/97 (74%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
P+ LL+RNL D RP D+R FE+FG +KDIYLPR+YY+GEPRGFGF+++ +DAAEA
Sbjct: 46 PSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAM 105
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGR 137
+ M+ +V+ GRE+ +VFAEENRK +MR GR
Sbjct: 106 KRMNHKVIGGREIAIVFAEENRKTTQEMRTTNGTSGR 142
>gi|115486805|ref|NP_001068546.1| Os11g0704700 [Oryza sativa Japonica Group]
gi|62733154|gb|AAX95271.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77552711|gb|ABA95508.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645768|dbj|BAF28909.1| Os11g0704700 [Oryza sativa Japonica Group]
Length = 502
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Query: 28 PRGRYGGGRGRD-LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFG 86
P R+G + ++ SL V NL CRPED++ PF++FG ++D+YLP+DY +GEPRGF
Sbjct: 20 PSSRHGCAKDKEGAAVSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFA 79
Query: 87 FIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMR 129
F++F DA++A+ HM+ ++L GRE++V FA + RK+P +MR
Sbjct: 80 FVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMR 122
>gi|326510839|dbj|BAJ91767.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 100/179 (55%), Gaps = 20/179 (11%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEP 93
GGR SLLVRN+ CRPED+R PFE+FG ++D+YLP+DYY+ EPRGF F++FV+P
Sbjct: 29 GGRREQGSGSLLVRNIPLSCRPEDLRVPFERFGPVRDVYLPKDYYTREPRGFAFVEFVDP 88
Query: 94 DDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG----------------- 136
DA++A+ H++ + GRE+TVV A E+RK+P DMR R R RG
Sbjct: 89 YDASDAQYHLNRSLFFGREITVVVAAESRKRPDDMRNRARVRGYSGEPERRNSRYGRSRS 148
Query: 137 -RFRRRSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRNYSRSV--SPHGQNYSRERSYS 192
RS Y+ +P DYS P R ++++S P G RSYS
Sbjct: 149 RSRSYSPRYRGRPRSRSRSYSPAPRRRDDYSASPPRSHHTQSPRRLPKGHEEDERRSYS 207
>gi|215734873|dbj|BAG95595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Query: 28 PRGRYGGGRGRD-LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFG 86
P R+G + ++ SL V NL CRPED++ PF++FG ++D+YLP+DY +GEPRGF
Sbjct: 20 PSSRHGCAKDKEGAAVSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFA 79
Query: 87 FIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMR 129
F++F DA++A+ HM+ ++L GRE++V FA + RK+P +MR
Sbjct: 80 FVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMR 122
>gi|9843655|emb|CAC03601.1| SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana]
Length = 236
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 72/97 (74%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
P+ LL+RNL D RP D+R FE+FG +KDIYLPR++ SGEPRGFGF+++ +DAAEA
Sbjct: 46 PSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNFNSGEPRGFGFVKYRYAEDAAEAM 105
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGR 137
+ M+ +V+ GRE+ +VFAEENRK P +MR GR
Sbjct: 106 KRMNHKVIGGREIAIVFAEENRKTPQEMRTTNGTSGR 142
>gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 75/107 (70%), Gaps = 12/107 (11%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
LLVRN+ DCRPE++R PFE+FG ++D+Y+PRDYYSG+PRGF F++FV+ DA EA+R M
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRA------------RERGRGRF 138
+ + GRE+TVV A E+RK+P +MR R+R +F
Sbjct: 109 NRRSFAGREITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHAKF 155
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Query: 28 PRGRYGGGRGRD-LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFG 86
P R+G + ++ SL V NL CRPED++ PF++FG ++D+YLP+DY +GEPRGF
Sbjct: 316 PSSRHGCAKDKEGAAVSLFVSNLTRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFA 375
Query: 87 FIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMR 129
F++F DA++A+ HM+ ++L GRE++V FA + RK+P +MR
Sbjct: 376 FVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMR 418
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Query: 28 PRGRYGGGRGRD-LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFG 86
P R+G + ++ SL V NL CRPED++ PF++FG ++D+YLP+DY +GEPRGF
Sbjct: 382 PSSRHGCAKDKEGAAVSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFA 441
Query: 87 FIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMR 129
F++F DA++A+ HM+ ++L GRE++V FA + RK+P +MR
Sbjct: 442 FVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMR 484
>gi|413950003|gb|AFW82652.1| hypothetical protein ZEAMMB73_474332 [Zea mays]
Length = 221
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 92/132 (69%), Gaps = 15/132 (11%)
Query: 81 EPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER--GRGRF 138
EPRGFGFIQ+ +P+DA++AK HMDG++LLGRE VVFAEENRKKPSDMRARE+ GRGR
Sbjct: 85 EPRGFGFIQYFDPEDASDAKYHMDGKMLLGRETVVVFAEENRKKPSDMRAREKISGRGRS 144
Query: 139 ---RRRSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSP 195
R RS P + SP R RS S R YSP ++++YSRS +P RERS SRS
Sbjct: 145 YDGRLRSRSPGLNDSPRGRL-RSQS--RSYSPALKQKHYSRSPAP-----PRERSLSRSL 196
Query: 196 AYDGPRGRSRSP 207
A + R RS SP
Sbjct: 197 AIN--RSRSASP 206
>gi|195648951|gb|ACG43943.1| FUS-interacting serine-arginine-rich protein 1 [Zea mays]
gi|448878230|gb|AGE46078.1| arginine/serine-rich splicing factor SCL28 transcript I [Zea mays]
Length = 240
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 66/84 (78%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
LL+RN+ RPEDIR FEQFG IKD+YLPR++++ E RGFGF++F P+DAA AKR M
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 104 DGQVLLGRELTVVFAEENRKKPSD 127
QV+ GRE+++V+AEENRK P +
Sbjct: 119 HHQVIGGREISIVYAEENRKTPQE 142
>gi|66362632|ref|XP_628282.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|67590297|ref|XP_665474.1| dentin phosphoryn [Cryptosporidium hominis TU502]
gi|46229752|gb|EAK90570.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|54656181|gb|EAL35244.1| dentin phosphoryn [Cryptosporidium hominis]
gi|323508677|dbj|BAJ77232.1| cgd7_940 [Cryptosporidium parvum]
gi|323510599|dbj|BAJ78193.1| cgd7_940 [Cryptosporidium parvum]
Length = 286
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 114/212 (53%), Gaps = 26/212 (12%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRNLR + P +R FE++G ++D+YLP DYY+ PRGFGF+++++P DA +A
Sbjct: 90 CSLLVRNLRFETSPGRVRHHFERYGPVRDVYLPLDYYTRRPRGFGFVEYMDPRDAQDAVN 149
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF-RRRSPPPRYSRSP----PPRYA 156
+DG +L G + VV A + RK P MR +R GR R PP RY P PP +
Sbjct: 150 RLDGSLLDGSTIRVVVAHDRRKSPETMRRIQRDSGRGPRMGGPPSRYDHRPSGGYPPEHG 209
Query: 157 -RSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYS-RSPAYDGPRGRSRSPHRGQRQS 214
R Y DY R+ Y +NY +R YS RSP+Y PRGRS S
Sbjct: 210 YRGGRYRDDYYGGRRQGGYR----DDDRNYRPKRRYSSRSPSYHSPRGRSVS-------- 257
Query: 215 WSPSRSRTPKRNHSVSRSRSRSPRRE-YSGER 245
R+P R S+SR S S R+ Y G+R
Sbjct: 258 ------RSPYRGGSISREHSHSISRDPYQGKR 283
>gi|68063653|ref|XP_673822.1| Ser/Arg-rich splicing factor [Plasmodium berghei strain ANKA]
gi|56491949|emb|CAH95915.1| Ser/Arg-rich splicing factor, putative [Plasmodium berghei]
Length = 297
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 113/230 (49%), Gaps = 29/230 (12%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
P SLL+R L+ + P +R F++FGAIKD+YLP DYY+ EPRGFGF++F +P DA +A
Sbjct: 11 PMSLLIRKLKFNTSPSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQAL 70
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG------RFRRRSPPPRYSRSPPPR 154
+ M+G L G + V A++ R P MR +ERG G ++ RY R
Sbjct: 71 KEMNGSELDGNRIEVFVAQKGRSDPRIMRYKERGGGSGYGHRKYSDNRLKRRYISKSNSR 130
Query: 155 YARSPSYGRDYSPPPRRRNYSR---------------SVSPHGQNYSRERSYSRSPAYDG 199
Y SY RD RRR+ SR S NY + + RS YD
Sbjct: 131 YG---SYSRD---KIRRRDKSRERIRYRDSYERNMRSSYKDKKNNYMKNYNRYRSRNYDR 184
Query: 200 PRGRSRSPHRGQRQSWSPSRSRTPKRNHSVSRSRSRSPRREYSGERNGDR 249
R R + SP + N S+SRS +++ R+EY + + D+
Sbjct: 185 SFSRGRRSRGYRHD--SPKYREKRRYNRSISRSENKNNRKEYKSKYSNDK 232
>gi|209879626|ref|XP_002141253.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556859|gb|EEA06904.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 266
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 68/101 (67%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRNLR + P +RR FE++G ++D+YLP DYY+ PRGFGF+++++P DA +A
Sbjct: 86 CSLLVRNLRFETSPSRVRRHFERYGTVRDVYLPLDYYTRRPRGFGFVEYMDPRDAEDAVN 145
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRS 142
++DG VL G + VV A + RK P MR ++ RF R S
Sbjct: 146 NLDGSVLDGSTIRVVVAHDRRKSPETMRKIQKDAARFSRSS 186
>gi|302844725|ref|XP_002953902.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
gi|300260714|gb|EFJ44931.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
Length = 294
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 67/97 (69%)
Query: 33 GGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVE 92
G R RDL TSLL RNL +D+R E+FG I+DIYLP+D+Y+G+PRG GF++F +
Sbjct: 20 GMRRERDLRTSLLFRNLSKTTTADDLRHTTERFGPIRDIYLPKDFYTGDPRGLGFVEFSD 79
Query: 93 PDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMR 129
P DA EA+ +DG L GR ++V FA+ RK+P D R
Sbjct: 80 PKDAEEARHSLDGSTLAGRVISVQFAQHGRKRPEDYR 116
>gi|301118214|ref|XP_002906835.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262108184|gb|EEY66236.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 233
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 68/92 (73%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRN+ RPEDIR+ FE++G ++D+Y+P+D+Y+ EP+GF F++F +A +A+R
Sbjct: 7 ISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREAEDARR 66
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
++DG + GR++ VVFA+E RK MR RER
Sbjct: 67 NLDGVRIDGRDIRVVFAQERRKSTDQMRERER 98
>gi|448878244|gb|AGE46085.1| arginine/serine-rich splicing factor SCL25B transcript II [Zea
mays]
gi|448878252|gb|AGE46089.1| arginine/serine-rich splicing factor SCL25B transcript VI [Zea
mays]
gi|448878258|gb|AGE46092.1| arginine/serine-rich splicing factor SCL25B transcript IX [Zea
mays]
Length = 84
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 63/79 (79%), Gaps = 6/79 (7%)
Query: 2 RGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
RG SY+PSPP GY RR RSPSP YGG RGRDLPTSLLVRNLR DCRPED+RRP
Sbjct: 3 RGYSYSPSPP-----RGYRRRARSPSPHDHYGG-RGRDLPTSLLVRNLRRDCRPEDLRRP 56
Query: 62 FEQFGAIKDIYLPRDYYSG 80
F QFG +KDIYLPRDYY+G
Sbjct: 57 FGQFGRVKDIYLPRDYYTG 75
>gi|224033195|gb|ACN35673.1| unknown [Zea mays]
gi|413955617|gb|AFW88266.1| hypothetical protein ZEAMMB73_484317 [Zea mays]
gi|413955618|gb|AFW88267.1| hypothetical protein ZEAMMB73_484317 [Zea mays]
Length = 143
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 102/159 (64%), Gaps = 28/159 (17%)
Query: 81 EPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARE----RGR- 135
EPRGFGFIQ+ +P+DA++AK +MDG++LLGRE+ VVFAEENRKKPSDMRARE RGR
Sbjct: 5 EPRGFGFIQYFDPEDASDAKYYMDGKMLLGREIAVVFAEENRKKPSDMRAREKISGRGRS 64
Query: 136 --GRFRRRSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSR 193
GR R RSP S RS S R YSP P+R++YSRS +P RERS SR
Sbjct: 65 YDGRLRSRSPGLNGSPR-----GRSRSQSRSYSPAPKRKHYSRSPAPR----PRERSLSR 115
Query: 194 SPAYDGPRGRSRSPHRGQRQSWSPSRSRTPKRNHSVSRS 232
SPA + RSR S SP SR+P R S+S S
Sbjct: 116 SPAVN----RSR--------SASPIVSRSPHRQGSLSVS 142
>gi|221057297|ref|XP_002259786.1| Arg-rich splicing factor [Plasmodium knowlesi strain H]
gi|193809858|emb|CAQ40562.1| Arg-rich splicing factor, putative [Plasmodium knowlesi strain H]
Length = 327
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 66/97 (68%)
Query: 38 RDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAA 97
R+ P SLL+R L++D P +R F++FGAIKD+YLP DYY+ EPRGFGF++F +P DA
Sbjct: 8 RNQPMSLLIRKLKYDTSPSMVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAE 67
Query: 98 EAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERG 134
A + M+G + G + V A++ R P MR +E+G
Sbjct: 68 VALKEMNGAEIDGNRVEVFVAQKGRSDPRVMRYKEKG 104
>gi|389584299|dbj|GAB67032.1| Ser/Arg-rich splicing factor [Plasmodium cynomolgi strain B]
Length = 352
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 66/96 (68%)
Query: 38 RDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAA 97
R+ P SLL+R L++D P +R F++FGAIKD+YLP DYY+ EPRGFGF++F +P DA
Sbjct: 8 RNQPMSLLIRKLKYDTSPSMVREKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAE 67
Query: 98 EAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+A + M+G + G + V A++ R P MR +E+
Sbjct: 68 QALKEMNGSEIDGNRIEVFVAQKGRSDPRLMRYKEK 103
>gi|124505987|ref|XP_001351591.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
gi|23504518|emb|CAD51398.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
Length = 308
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 78/131 (59%), Gaps = 8/131 (6%)
Query: 38 RDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAA 97
++ P SLL+R L+ D P +R F++FGAIKD+YLP DYY+ EPRGFGF++F + DA
Sbjct: 8 KNQPMSLLIRKLKFDTSPSIVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDAKDAE 67
Query: 98 EAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPP----RYSRSPPP 153
+A + M+G + G + V A++ R P MR +E+G G R++P RY
Sbjct: 68 QALKEMNGSEIDGSRIEVFVAQKGRSDPRHMRYKEKG-GYAYRKNPDNKIRRRYISKSNS 126
Query: 154 RYARSPSYGRD 164
RY SY RD
Sbjct: 127 RYG---SYSRD 134
>gi|156094342|ref|XP_001613208.1| Ser/Arg-rich splicing factor [Plasmodium vivax Sal-1]
gi|148802082|gb|EDL43481.1| Ser/Arg-rich splicing factor, putative [Plasmodium vivax]
Length = 328
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 38 RDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAA 97
R+ P SLL+R L++D P +R F+++GAIKD+YLP DYY+ EPRGFGF++F +P DA
Sbjct: 8 RNQPMSLLIRKLKYDTSPSMVREKFKKYGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAE 67
Query: 98 EAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+A + M+G + G + V A++ R P MR +E+
Sbjct: 68 QALKEMNGSEIDGNRIEVFVAQKGRSDPRLMRYKEK 103
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL+VRNL D R ED+R FE++G +KD+Y+PRDYY+ PRGFGFI+F E DA +A
Sbjct: 51 VSLVVRNLPLDIRMEDLRAKFEKYGELKDVYIPRDYYTQRPRGFGFIEFKETRDAEDAMY 110
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM 128
++D V+ GRE++V F+ E RK P DM
Sbjct: 111 NLDRSVVNGREISVTFSREGRKTPRDM 137
>gi|32398853|emb|CAD98563.1| splicing factor, possible [Cryptosporidium parvum]
Length = 330
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 61/90 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLL+R+LR D +RR FE+FGAI+D+YLP DY S PRGFGF+++VE +DA A
Sbjct: 14 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 73
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARE 132
MDG L G + V FA+E RK P MR RE
Sbjct: 74 MDGATLDGVTINVTFAQEGRKSPESMRHRE 103
>gi|67623223|ref|XP_667894.1| splicing factor [Cryptosporidium hominis TU502]
gi|54659062|gb|EAL37659.1| splicing factor [Cryptosporidium hominis]
Length = 330
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 61/90 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLL+R+LR D +RR FE+FGAI+D+YLP DY S PRGFGF+++VE +DA A
Sbjct: 14 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 73
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARE 132
MDG L G + V FA+E RK P MR RE
Sbjct: 74 MDGATLDGVTINVTFAQEGRKSPESMRHRE 103
>gi|209878256|ref|XP_002140569.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556175|gb|EEA06220.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 244
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Query: 33 GGGRG-RDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFV 91
G RG RD SLL+R+LR + P +RR FE+FG I+D+YLP D+++ PRGFGF+++V
Sbjct: 3 GNSRGYRDPRRSLLIRSLRFETPPSLVRRVFERFGQIRDVYLPVDFHTKRPRGFGFVEYV 62
Query: 92 EPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRS 150
E DA A + M+G L G ++ V FA+E RK P MR R+ + RRS RY+ S
Sbjct: 63 EESDALAAIQRMNGANLDGSQIHVTFAQEGRKSPESMRHRD-NENYYTRRSIDSRYNSS 120
>gi|66475620|ref|XP_627626.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
gi|46229295|gb|EAK90144.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
Length = 344
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 61/90 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLL+R+LR D +RR FE+FGAI+D+YLP DY S PRGFGF+++VE +DA A
Sbjct: 28 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 87
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARE 132
MDG L G + V FA+E RK P MR RE
Sbjct: 88 MDGATLDGVTINVTFAQEGRKSPESMRHRE 117
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL+VRNL D R ED+R FE++G +KD+Y+PRDYY+ PRGFGF++F + DA +A
Sbjct: 17 VSLVVRNLPLDIRAEDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFVEFKDTRDAEDAMY 76
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM---RARERG 134
+D + GRE++V F+ E RK P DM AR++G
Sbjct: 77 SLDRSTINGREISVTFSREGRKTPRDMMKIEARQKG 112
>gi|82541600|ref|XP_725030.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479883|gb|EAA16595.1| PR264 [Plasmodium yoelii yoelii]
Length = 121
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 64/96 (66%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
P SLL+R L+ + P +R F++FGAIKD+YLP DYY+ EPRGFGF++F +P DA EA
Sbjct: 11 PMSLLIRKLKFNTSPSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAXEAL 70
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
+ M+G L + V A++ R P MR +ERG G
Sbjct: 71 KEMNGXELXXNRIEVFVAQKGRSDPRIMRYKERGGG 106
>gi|159463786|ref|XP_001690123.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284111|gb|EDP09861.1| predicted protein [Chlamydomonas reinhardtii]
Length = 118
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 64/94 (68%)
Query: 36 RGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDD 95
R RD TSLL RNL ED+R E++G I+DIYLP+D+ +GEPRG GF++F +P D
Sbjct: 24 RERDPSTSLLFRNLSKTTTTEDLRHYAERYGPIRDIYLPKDFQTGEPRGLGFVEFSDPKD 83
Query: 96 AAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMR 129
A EA+ MDG + GR ++V FA+ RK+P D R
Sbjct: 84 AEEARHCMDGSTVAGRVISVTFAQHGRKRPEDYR 117
>gi|449685942|ref|XP_002169071.2| PREDICTED: serine/arginine-rich splicing factor 10-like [Hydra
magnipapillata]
Length = 171
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 63/97 (64%)
Query: 36 RGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDD 95
RG PTS+ VRN+ HD R ED+RR FE++G I D+Y+P DYY+ EPRGF ++QF DD
Sbjct: 4 RGGRTPTSVFVRNVHHDVRSEDLRRIFEKYGDISDVYIPLDYYTREPRGFAYVQFDYEDD 63
Query: 96 AAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
A +A +DG L GR++ A RK P MR ++
Sbjct: 64 AEDAVDGLDGTTLFGRQIFCKNARGGRKTPHQMRYKD 100
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 67/96 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRNL R +D++R F FG ++D+YLP D+ + +PRGF F++F +P DAA A+
Sbjct: 33 VSLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHARD 92
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGR 137
+DG L GR ++V++A+E RK+P +M +ER GR
Sbjct: 93 RLDGYNLDGRNISVLYAQEKRKRPDEMVHKERVEGR 128
>gi|325179763|emb|CCA14166.1| splicing factor putative [Albugo laibachii Nc14]
Length = 207
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 63/87 (72%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLL+RN+ R +++R+ FE+FG ++D+Y+PRD+++ E +GF F++F DA EA R
Sbjct: 7 ISLLIRNISRRMRSDELRKTFEEFGDVRDVYIPRDFHTREVKGFAFVEFKNERDAEEALR 66
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM 128
++DG L GRE+TVVFA+E RK +M
Sbjct: 67 NLDGSRLDGREITVVFAQEKRKSTDEM 93
>gi|70928216|ref|XP_736352.1| Ser/Arg-rich splicing factor [Plasmodium chabaudi chabaudi]
gi|56510813|emb|CAH84192.1| Ser/Arg-rich splicing factor, putative [Plasmodium chabaudi
chabaudi]
Length = 129
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 62/92 (67%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
P SLL+R L+ + P +R F++FGAIKD+YLP DYY+ EPRGFGF++F +P DA EA
Sbjct: 11 PMSLLIRKLKFNTSPSMVREKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEEAL 70
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
+ M+G + G + V A++ R P MR +E
Sbjct: 71 KEMNGSEIDGNRIEVFVAQKGRSDPRVMRYKE 102
>gi|156084456|ref|XP_001609711.1| RNA recognition motif containing protein [Babesia bovis]
gi|154796963|gb|EDO06143.1| RNA recognition motif containing protein [Babesia bovis]
Length = 253
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 78/138 (56%), Gaps = 15/138 (10%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S+L+RNL++ R ++R FE FG I+D+YLP+DY SG PRGFGF++FVE A +A R
Sbjct: 10 SVLIRNLKYSTRASEVREAFECFGKIRDVYLPQDYSSGMPRGFGFVEFVEEAAALDAIRK 69
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMR-----------ARERGRGRFRRRSPP---PRY- 147
MD G+ +T A++ RK P+ MR A R +R P PR
Sbjct: 70 MDNTTFNGKVITCCEAQDRRKSPNSMRRAYPSSNHRYQANHSQEHRNSKRGQPYGRPRSR 129
Query: 148 SRSPPPRYARSPSYGRDY 165
SRS RY +SPSY R Y
Sbjct: 130 SRSLGMRYRKSPSYERRY 147
>gi|413935498|gb|AFW70049.1| hypothetical protein ZEAMMB73_947633 [Zea mays]
Length = 143
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 98/155 (63%), Gaps = 20/155 (12%)
Query: 81 EPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRR 140
EPRGFGFIQ+ + +DA++AK HMDG++LLGRE+ VVFAEEN KKP DMRARE+ GR R
Sbjct: 5 EPRGFGFIQYFDTEDASDAKYHMDGKMLLGREIVVVFAEENWKKPFDMRAREKISGRGRS 64
Query: 141 RSPPPRYSRSP---PPRYARSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAY 197
+SRSP RS S R YSP ++++YSRS +P RERS SRSPA
Sbjct: 65 YD-GRLHSRSPGLNDSPRGRSRSQSRSYSPTLKQKHYSRSPAPR----PRERSLSRSPAV 119
Query: 198 DGPRGRSRSPHRGQRQSWSPSRSRTPKRNHSVSRS 232
+ RSRS SP SR+P+R S+S S
Sbjct: 120 N----RSRSA--------SPIVSRSPRRQGSLSVS 142
>gi|294933970|ref|XP_002780926.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239891073|gb|EER12721.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 235
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 59/88 (67%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL+VRNL +D P+ +R F ++G I+D+YLP DY SG PRGFGF++F +P D EAK
Sbjct: 68 CSLIVRNLNYDTSPQHVRSLFSRYGEIRDVYLPLDYNSGRPRGFGFVEFCDPRDVVEAKN 127
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMR 129
MDG+V+ G + V A+ RK P MR
Sbjct: 128 AMDGKVVDGNAIQVDIAQRGRKSPRTMR 155
>gi|224073164|ref|XP_002304003.1| predicted protein [Populus trichocarpa]
gi|222841435|gb|EEE78982.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 49/57 (85%)
Query: 77 YYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+ EPRGFGF+Q+ +P DAAEAK HMDG+V LGRELTVVFAEENRKKP DMRARER
Sbjct: 20 FLLLEPRGFGFVQYADPHDAAEAKHHMDGRVFLGRELTVVFAEENRKKPVDMRARER 76
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P DYY+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDKKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P DYY+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDKKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 64/87 (73%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRN+ RPEDIR+ FE++G ++D+Y+P+DYY+ EP+GF F++F +A +A+R
Sbjct: 232 ISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDYYTKEPKGFAFVEFRSEREADDARR 291
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM 128
++DG + GR++ VVFA+E RK M
Sbjct: 292 NLDGVRIDGRDIRVVFAQERRKSTDQM 318
>gi|413947426|gb|AFW80075.1| hypothetical protein ZEAMMB73_562035 [Zea mays]
Length = 661
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 53/63 (84%)
Query: 55 PEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELT 114
P+D+RRPF +FG +KDIYL DYY+ EPRGFGFIQ +P+DA++AK HMDG++LLGRE+
Sbjct: 589 PDDLRRPFGKFGPVKDIYLSNDYYTREPRGFGFIQNFDPEDASDAKYHMDGKMLLGREIV 648
Query: 115 VVF 117
VV
Sbjct: 649 VVL 651
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 262
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 66/91 (72%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ +D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A R
Sbjct: 10 TSLFVRNVANDTRSEDLRREFGRYGPIVDVYVPPDFYTRRPRGFAYVQFEDVRDAEDALR 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQMEIQFAQGDRKTPNQMKAKE 100
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKCICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|384247695|gb|EIE21181.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 184
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 65/93 (69%)
Query: 35 GRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPD 94
GR R SLLVRNL +D+R E++G ++D+Y+P+DYYSGEPRG GF++F +P
Sbjct: 7 GRERADGCSLLVRNLSRSVTLDDLRYVAEKYGRLRDVYIPKDYYSGEPRGIGFLEFTDPR 66
Query: 95 DAAEAKRHMDGQVLLGRELTVVFAEENRKKPSD 127
DA +A +D +V+ G+E++VV A + RK+P D
Sbjct: 67 DAEDAIYGLDRKVIQGKEVSVVLALQGRKRPDD 99
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|291399268|ref|XP_002716024.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 66/95 (69%)
Query: 38 RDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAA 97
R L TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA
Sbjct: 6 RSLNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAE 65
Query: 98 EAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
+A ++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 66 DALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 66/92 (71%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ + RPED+RR F ++G I D+Y+P D+Y+ +PRGF +IQF + DA +A
Sbjct: 10 TSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+D + + GR++ + FA+ +RK P+ M+++ER
Sbjct: 70 SLDRKWVCGRQIEIQFAQGDRKTPNQMKSKER 101
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Splicing factor SRp38; AltName:
Full=Splicing factor, arginine/serine-rich 13A; AltName:
Full=TLS-associated protein with Ser-Arg repeats;
Short=TASR; Short=TLS-associated protein with SR
repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich 13A;
AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 66/92 (71%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ + RPED+RR F ++G I D+Y+P D+Y+ +PRGF +IQF + DA +A
Sbjct: 10 TSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+D + + GR++ + FA+ +RK P+ M+++ER
Sbjct: 70 SLDRKWVCGRQIEIQFAQGDRKTPNQMKSKER 101
>gi|313231155|emb|CBY19153.1| unnamed protein product [Oikopleura dioica]
gi|313242052|emb|CBY34232.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 62/90 (68%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SL VRN+ D +++ R F ++G+IKD+Y+PRDYY+ PRGF ++QF + DA +A+
Sbjct: 12 SLFVRNIADDIDQDELTREFSRYGSIKDVYIPRDYYNKRPRGFAYVQFADIHDAEDAQEG 71
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARE 132
MDG+ + GR + V FA+ +RK P MR R+
Sbjct: 72 MDGRKVCGRFIDVQFAKGDRKSPGSMRTRD 101
>gi|170585176|ref|XP_001897362.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595237|gb|EDP33806.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 340
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%), Gaps = 6/119 (5%)
Query: 30 GRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ 89
GR G R ++PT L VR + + RP+D+R FEQ G ++D+Y+P DYY+ E RGF +++
Sbjct: 3 GRRGSYRDDEIPT-LYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVK 61
Query: 90 FVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARE-----RGRGRFRRRSP 143
F DA +A R ++G +LGR + V +AE RK ++MRAR+ R R R+R RSP
Sbjct: 62 FEFTRDAEDALRELNGTSILGRRIEVEWAEGQRKTKTEMRARDSYNSYRVRNRYRSRSP 120
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|294947288|ref|XP_002785313.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239899086|gb|EER17109.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 281
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 34 GGRG--RDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFV 91
GGRG R+ SLLVRNL + P +R FE+FG ++D+Y+P DYYS PRGFGF++F
Sbjct: 135 GGRGGAREGSCSLLVRNLPDEVNPMRLRDAFERFGYVRDVYIPLDYYSKRPRGFGFVEFD 194
Query: 92 EPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMR 129
+P DA EA+ MDGQ L + V A++ RK P MR
Sbjct: 195 DPRDADEARDAMDGQRLGSNYVEVEVAKQRRKSPRTMR 232
>gi|357462659|ref|XP_003601611.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355490659|gb|AES71862.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 147
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 91/150 (60%), Gaps = 20/150 (13%)
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF------RRRSPPPRYSRSPPPRYA 156
MDGQVLLGRE+TVVFAEENRKKP++MR RER GR R PPR+
Sbjct: 1 MDGQVLLGREITVVFAEENRKKPTEMRVRERSSGRHSDRRRSPPRYSRSPRYSRSPPRHR 60
Query: 157 RSPSYGRDY-SPPPRRRNYSRSVSP-------HGQNYSRERSYSRSPAYDG-PRGRSRSP 207
RDY SPPP+RR YSRSVSP G +SRERSYSRSP +G R RS+SP
Sbjct: 61 SRSRGSRDYHSPPPKRREYSRSVSPEDRRHSREGSQHSRERSYSRSPPKNGDARSRSQSP 120
Query: 208 HRGQRQSWSPSRSRTPKRNHSVSRSRSRSP 237
+G +S SPS SR + + SRSRSP
Sbjct: 121 VKGSVESRSPSPSRDVR-----AASRSRSP 145
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|147899629|ref|NP_001079656.1| serine/arginine-rich splicing factor 10 [Xenopus laevis]
gi|28302303|gb|AAH46695.1| MGC53149 protein [Xenopus laevis]
Length = 258
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 63/91 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+SL VRN+ D R ED+RR F ++G I D+Y+P DYY+ PRGF ++QF + DA +A
Sbjct: 10 SSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYNRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P M+A+E
Sbjct: 70 NLDKKWICGRQIEIQFAQGDRKTPHQMKAKE 100
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D + ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|410170856|ref|XP_003960061.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328339|ref|XP_004024960.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
Length = 217
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+ +E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKVKE 100
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAFH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2 variant
[Homo sapiens]
Length = 262
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ ++A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQIKAKE 100
>gi|41055271|ref|NP_956827.1| splicing factor, arginine/serine-rich 13A [Danio rerio]
gi|33604116|gb|AAH56275.1| Zgc:65772 protein [Danio rerio]
gi|42542503|gb|AAH66442.1| Zgc:65772 [Danio rerio]
Length = 248
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 64/92 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+SL VRN+ + RPED+RR F ++G I D+Y+P D+YS PRGF +IQF + DA +A
Sbjct: 10 SSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYIQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
++D + + GR++ + FA+ +RK P M+ +ER
Sbjct: 70 NLDRKWVCGRQIEIQFAQGDRKTPGQMKNKER 101
>gi|74204113|dbj|BAE29044.1| unnamed protein product [Mus musculus]
gi|74211878|dbj|BAE29284.1| unnamed protein product [Mus musculus]
Length = 183
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|208973274|ref|NP_001129183.1| 35 kDa SR repressor protein [Rattus norvegicus]
Length = 261
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 64/92 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ RPED+RR F ++G I D+Y+P D+YS PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYVQFEDVRDAEDALY 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 NLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|307219223|ref|NP_001182527.1| splicing factor, arginine/serine-rich 13B [Sus scrofa]
Length = 261
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 64/92 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALY 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 NLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|389583810|dbj|GAB66544.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1084
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLL++NL PE IR+ F+ FG I+D+YLP D+Y+ PRGFGF+++ EP+ A EA
Sbjct: 6 CSLLIKNLSFHTSPEKIRKIFQSFGKIRDVYLPLDHYTRRPRGFGFVEYYEPEYAKEAMS 65
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSY 161
++ + G+E+ ++ A+ RK P M+ +++ + RY R P RS S
Sbjct: 66 ILNHSKIDGKEIKIIIAQNRRKSPETMKI-------YQQNARGGRYRRHP----YRSDS- 113
Query: 162 GRDYSPPPRRRNYSRSVS 179
RD S RR Y RS S
Sbjct: 114 -RDRSSELERRKYDRSKS 130
>gi|5730079|ref|NP_006616.1| serine/arginine-rich splicing factor 10 isoform 1 [Homo sapiens]
gi|6753820|ref|NP_034308.1| serine/arginine-rich splicing factor 10 isoform 1 [Mus musculus]
gi|346986279|ref|NP_001231297.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
gi|114554649|ref|XP_001166460.1| PREDICTED: uncharacterized protein LOC456627 isoform 3 [Pan
troglodytes]
gi|332266729|ref|XP_003282350.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|344287394|ref|XP_003415438.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 4
[Loxodonta africana]
gi|403287342|ref|XP_003934908.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410032453|ref|XP_003949372.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|426328337|ref|XP_004024959.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|441676940|ref|XP_004092716.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|16265857|gb|AAL16665.1|AF419331_1 TLS-associated protein TASR-1 [Homo sapiens]
gi|2961107|gb|AAC70916.1| TLS-associated protein with SR repeats [Mus musculus]
gi|2961149|gb|AAC70918.1| TLS-associated protein TASR [Homo sapiens]
gi|7022446|dbj|BAA91601.1| unnamed protein product [Homo sapiens]
gi|12654547|gb|AAH01107.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787482|gb|AAL06098.1| TLS-associated SR protein 1 [Homo sapiens]
gi|25006524|gb|AAN65381.1| splicing factor SRp38-2 [Homo sapiens]
gi|74178032|dbj|BAE29809.1| unnamed protein product [Mus musculus]
gi|74195900|dbj|BAE30509.1| unnamed protein product [Mus musculus]
gi|74214411|dbj|BAE40441.1| unnamed protein product [Mus musculus]
gi|261861046|dbj|BAI47045.1| splicing factor, arginine/serine-rich 13A [synthetic construct]
gi|312153330|gb|ADQ33177.1| FUS interacting protein (serine/arginine-rich) 1 [synthetic
construct]
gi|410223008|gb|JAA08723.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261894|gb|JAA18913.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302462|gb|JAA29831.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330571|gb|JAA34232.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417396659|gb|JAA45363.1| Putative serine/arginine-rich splicing factor [Desmodus rotundus]
Length = 183
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|301754964|ref|XP_002913325.1| PREDICTED: splicing factor, arginine/serine-rich 13A-like
[Ailuropoda melanoleuca]
gi|359318923|ref|XP_003638943.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 183
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|4001722|dbj|BAA35093.1| neural specific sr protein NSSR 2 [Mus musculus]
Length = 183
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|118151320|ref|NP_001071594.1| splicing factor, arginine/serine-rich 13A [Bos taurus]
gi|73586753|gb|AAI03101.1| FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
gi|296490040|tpg|DAA32153.1| TPA: FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
Length = 182
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|300360549|ref|NP_001177936.1| serine/arginine-rich splicing factor 10 isoform 5 [Homo sapiens]
gi|291393216|ref|XP_002713069.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
gi|410170859|ref|XP_003960062.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|74139434|dbj|BAE40858.1| unnamed protein product [Mus musculus]
Length = 182
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|413949176|gb|AFW81825.1| hypothetical protein ZEAMMB73_636417 [Zea mays]
Length = 143
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 56/70 (80%), Gaps = 7/70 (10%)
Query: 81 EPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARE----RGR- 135
EPRGFGFIQ+ +P+DA+ AK HMDG++LLGR++ VVF EENRKKPSDMRARE RGR
Sbjct: 8 EPRGFGFIQYFDPEDASNAKYHMDGKMLLGRKIAVVFVEENRKKPSDMRAREKISGRGRS 67
Query: 136 --GRFRRRSP 143
GR R RSP
Sbjct: 68 YDGRLRSRSP 77
>gi|414589482|tpg|DAA40053.1| TPA: hypothetical protein ZEAMMB73_656721 [Zea mays]
Length = 110
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 52/58 (89%)
Query: 81 EPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF 138
EPRGFGFIQ+ +P+DA++AK HMDG++LLGRE+ VVFAEENRKKP+D+RARE+ + F
Sbjct: 5 EPRGFGFIQYFDPEDASDAKYHMDGKMLLGREIAVVFAEENRKKPADIRAREKNKIIF 62
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ + K P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDLKTPNQMKAKE 100
>gi|90079587|dbj|BAE89473.1| unnamed protein product [Macaca fascicularis]
Length = 219
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|348570784|ref|XP_003471177.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cavia
porcellus]
Length = 173
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|300360545|ref|NP_001177935.1| serine/arginine-rich splicing factor 10 isoform 4 [Homo sapiens]
gi|332266731|ref|XP_003282351.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|397140012|ref|XP_003846473.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328341|ref|XP_004024961.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|14603220|gb|AAH10074.1| FUSIP1 protein [Homo sapiens]
Length = 173
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|344287390|ref|XP_003415436.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 2
[Loxodonta africana]
Length = 173
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|403287344|ref|XP_003934909.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
Length = 173
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|359318925|ref|XP_003638944.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 173
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|429329487|gb|AFZ81246.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 212
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLL+RNLR+ P+ ++ FE+FG I+D+YLP DY + PRGFGF+++ E +D EA +
Sbjct: 8 SLLIRNLRYSTSPQIVKETFERFGRIRDVYLPLDYNTRRPRGFGFVEYYEKEDVLEAVKA 67
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERG 134
MD L G +T A++ RK P+ MR RG
Sbjct: 68 MDNADLDGSVITCCLAQDRRKSPNSMRRAYRG 99
>gi|148612890|ref|NP_542781.3| serine/arginine-rich splicing factor 12 [Homo sapiens]
gi|47606193|sp|Q8WXF0.1|SRS12_HUMAN RecName: Full=Serine/arginine-rich splicing factor 12; AltName:
Full=35 kDa SR repressor protein; Short=SRrp35; AltName:
Full=Splicing factor, arginine/serine-rich 13B; AltName:
Full=Splicing factor, arginine/serine-rich 19
gi|18034491|gb|AAL57515.1|AF449428_1 SRrp35 [Homo sapiens]
gi|189054199|dbj|BAG36719.1| unnamed protein product [Homo sapiens]
gi|261859278|dbj|BAI46161.1| 35 kDa SR repressor protein [synthetic construct]
gi|380809714|gb|AFE76732.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
gi|384945376|gb|AFI36293.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 64/92 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL +RN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALY 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 NLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|390337101|ref|XP_800412.2| PREDICTED: serine/arginine-rich splicing factor 12-like
[Strongylocentrotus purpuratus]
Length = 205
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 42 TSLLVRNLRHDC-RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
TSL VRNL D R ED+R F ++G I DIY+P DYY+ EPRGF ++QF + DA +A
Sbjct: 12 TSLYVRNLPDDVSRAEDMRNLFGKYGPISDIYIPLDYYTREPRGFAYVQFDDIRDAEDAM 71
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERG 134
+D GREL + +AE +RK P+ MR +ERG
Sbjct: 72 YALDRYRFYGRELEIQYAEGDRKTPTQMRGKERG 105
>gi|71043780|ref|NP_001020909.1| serine/arginine-rich splicing factor 10 [Rattus norvegicus]
gi|68533686|gb|AAH98831.1| FUS interacting protein (serine-arginine rich) 1 [Rattus
norvegicus]
Length = 164
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 65/93 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL +RN+ + RPED+RR F ++G + D+Y+P D+YS PRGF +IQF + DA +A
Sbjct: 10 TSLFIRNISDESRPEDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERG 134
++D + + GR++ + FA+ +RK P+ M+ +E G
Sbjct: 70 NLDRKWVCGRQIEIQFAQGDRKTPNQMQGKEGG 102
>gi|198438407|ref|XP_002126373.1| PREDICTED: similar to FUS interacting protein (serine-arginine
rich) 1 [Ciona intestinalis]
Length = 221
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL VRN+ + RP+D+RR F +FG + D+Y+P DYY+ PRGF +IQF + DA +A
Sbjct: 8 ASLFVRNIADNIRPDDLRREFVRFGPVSDVYIPLDYYNRRPRGFAYIQFEDTRDAEDALY 67
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
MD + + GR + V FA +RK P+ MR +E
Sbjct: 68 AMDRKWICGRYIEVQFAAGDRKTPNQMRTKE 98
>gi|332807982|ref|XP_513202.3| PREDICTED: uncharacterized protein LOC456627 isoform 5 [Pan
troglodytes]
Length = 176
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|387018626|gb|AFJ51431.1| Serine/arginine-rich splicing factor 12-like [Crotalus adamanteus]
Length = 234
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 64/92 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ RPED+RR F ++G + D+Y+P D+Y+ PRGF +IQF + DA +A
Sbjct: 10 TSLFVRNVADATRPEDLRREFGRYGPVVDVYIPLDFYTRRPRGFAYIQFEDVRDAEDALY 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 NLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|300360554|ref|NP_001177938.1| serine/arginine-rich splicing factor 10 isoform 6 [Homo sapiens]
gi|332266733|ref|XP_003282352.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|332807985|ref|XP_001166490.2| PREDICTED: uncharacterized protein LOC456627 isoform 4 [Pan
troglodytes]
gi|344287392|ref|XP_003415437.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 3
[Loxodonta africana]
gi|345793665|ref|XP_866416.2| PREDICTED: serine/arginine-rich splicing factor 10 isoform 5 [Canis
lupus familiaris]
gi|403287346|ref|XP_003934910.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410170861|ref|XP_003960063.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328343|ref|XP_004024962.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|194382312|dbj|BAG58911.1| unnamed protein product [Homo sapiens]
gi|410223012|gb|JAA08725.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
Length = 165
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|219888887|gb|ACL54818.1| unknown [Zea mays]
gi|414887750|tpg|DAA63764.1| TPA: splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 138
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 84/128 (65%), Gaps = 12/128 (9%)
Query: 81 EPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRR 140
+PRGFGF+Q+ +P DAA+AK +MDGQV+LGR++TVVFAEENRKKP +MRAR+R RG
Sbjct: 5 DPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKKPQEMRARDRVRGHSYD 64
Query: 141 RSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGP 200
R SRSP RSPS R ++YSRS + ++ RERSYS SP
Sbjct: 65 DRRYSR-SRSPRYYRGRSPS---------RSQSYSRSPPQNPRHRLRERSYSGSPV--DS 112
Query: 201 RGRSRSPH 208
R RS SP+
Sbjct: 113 RSRSGSPY 120
>gi|449684562|ref|XP_002161704.2| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Hydra magnipapillata]
Length = 131
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 60/91 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL +RNL R +D+RR F ++G I+DIY+P DYY+ EPRGF ++QF + DA +A
Sbjct: 12 TSLYIRNLSSSTRSDDLRRMFAKYGPIRDIYIPLDYYTREPRGFCYVQFEDIRDAEDALY 71
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
H L GREL + +AE +RK P MR RE
Sbjct: 72 HESHARLHGRELDIQYAEGDRKTPGQMRTRE 102
>gi|237832865|ref|XP_002365730.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211963394|gb|EEA98589.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 208
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLL+RNL + P+ +R+ FE+FG ++D+YLP D+++ PRGFGF++F E A EA R
Sbjct: 5 CSLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMR 64
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMR 129
MD ++ G E+ V+ A++ RK P MR
Sbjct: 65 EMDRTMIDGNEVHVIIAQDRRKSPETMR 92
>gi|221488187|gb|EEE26401.1| hypothetical protein TGGT1_109290 [Toxoplasma gondii GT1]
gi|221508700|gb|EEE34269.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 208
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLL+RNL + P+ +R+ FE+FG ++D+YLP D+++ PRGFGF++F E A EA R
Sbjct: 5 CSLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMR 64
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMR 129
MD ++ G E+ V+ A++ RK P MR
Sbjct: 65 EMDRTMIDGNEVHVIIAQDRRKSPETMR 92
>gi|291404036|ref|XP_002718366.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPIDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + G ++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGHQIEIQFAQGDRKTPNQMKAKE 100
>gi|147903707|ref|NP_001088237.1| serine/arginine-rich splicing factor 12 [Xenopus laevis]
gi|54038377|gb|AAH84231.1| LOC495068 protein [Xenopus laevis]
Length = 251
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 64/92 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF +IQF + DA +A
Sbjct: 10 TSLFVRNVGDATRPEDLRREFGRYGPIVDVYVPLDFYNRRPRGFAYIQFEDVRDAEDALY 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 NLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|399216355|emb|CCF73043.1| unnamed protein product [Babesia microti strain RI]
Length = 298
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 59/87 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S+LVRNL PE +R FE+FG I+D+YLP D+++ +PRGFGF++F + + A EA +
Sbjct: 9 SVLVRNLLETTTPELVRETFEKFGEIRDVYLPTDFFTHKPRGFGFVEFYKLESAKEAVKE 68
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMR 129
MD + + G ++V A++ RK P MR
Sbjct: 69 MDNKTIDGATVSVTPAQDRRKSPESMR 95
>gi|383415877|gb|AFH31152.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 64/92 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL +RN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + +A +A
Sbjct: 10 TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVREAEDALY 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 NLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|357017461|gb|AET50759.1| hypothetical protein [Eimeria tenella]
Length = 196
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRNL + PE +R F G++KD+YLP DY+S PRGFGF++F +DA A
Sbjct: 10 MSLLVRNLSYQTSPEAVRSAFAVHGSVKDVYLPLDYHSRMPRGFGFVEFWHREDAERALE 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRAR-ERGRG----RFRRRSPPPRYSRSPPP 153
MDG L G+ + V A++ R P M+ R ERGR R RR RYSR P
Sbjct: 70 KMDGFELDGKAIEVAIAKKGRSAPQQMKQRDERGRREGSPRGRRYEDERRYSRMDSP 126
>gi|297829752|ref|XP_002882758.1| hypothetical protein ARALYDRAFT_897406 [Arabidopsis lyrata subsp.
lyrata]
gi|297328598|gb|EFH59017.1| hypothetical protein ARALYDRAFT_897406 [Arabidopsis lyrata subsp.
lyrata]
Length = 139
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 61/79 (77%), Gaps = 6/79 (7%)
Query: 3 GRSYTPSP-PPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
GRSY+ SP PPR YGRR RSPSP Y G R RD PTSLLVRNLRHDCR +D+RRP
Sbjct: 2 GRSYSYSPSPPRS----YGRRYRSPSPVDYYRG-RSRDPPTSLLVRNLRHDCRQDDLRRP 56
Query: 62 FEQFGAIKDIYLPRDYYSG 80
F +FG +KDIYLPR+YY+G
Sbjct: 57 FGRFGRLKDIYLPRNYYTG 75
>gi|448878350|gb|AGE46138.1| arginine/serine-rich splicing factor SCL25B transcript III
[Sorghum bicolor]
Length = 81
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 65/82 (79%), Gaps = 6/82 (7%)
Query: 2 RGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRP 61
RG SY+PSPP GY RR RSPSPR YGG RGRDLPTSLLVRNLR DCRPED+RRP
Sbjct: 3 RGYSYSPSPPR-----GYRRRERSPSPRDYYGG-RGRDLPTSLLVRNLRRDCRPEDLRRP 56
Query: 62 FEQFGAIKDIYLPRDYYSGEPR 83
F QFG +KDIYLPRDYY+G +
Sbjct: 57 FGQFGRLKDIYLPRDYYTGNVK 78
>gi|410170863|ref|XP_003960064.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
Length = 146
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 64/91 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|302834399|ref|XP_002948762.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
gi|300265953|gb|EFJ50142.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
Length = 274
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
S+LVRN+ + ED+R FE+FG ++D+Y+PRDYY+ RGFGFI+F + DA EA
Sbjct: 21 VSVLVRNIPLNYTAEDLRAKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDADEAIY 80
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
D +L GRE+ V ++E RK P +M E
Sbjct: 81 QTDRTMLDGREINVCLSKEGRKTPREMMILE 111
>gi|227204479|dbj|BAH57091.1| AT1G55310 [Arabidopsis thaliana]
Length = 203
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 85/129 (65%), Gaps = 4/129 (3%)
Query: 91 VEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRS 150
++P DAA+AK HMDG +LLGRELTVVFAEENRKKP++MRARERG GRFR R P S
Sbjct: 1 MDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYS 60
Query: 151 PPPRYARSPSYGR----DYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRGRSRS 206
R DY PP RR++ RS+SP + Y RSYSRSPA DG RGRS +
Sbjct: 61 RSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLT 120
Query: 207 PHRGQRQSW 215
P RG+ +S
Sbjct: 121 PVRGKSRSL 129
>gi|221056270|ref|XP_002259273.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809344|emb|CAQ40046.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 946
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLL++NL P+ IR+ F+ FG ++D+YLP D+Y+ PRGFGF+++ EP A EA
Sbjct: 6 CSLLIKNLSFHTSPDKIRKIFQSFGKVRDVYLPLDHYTRRPRGFGFVEYYEPQYAKEALI 65
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSY 161
++ + G E+ ++ A+ RK P M+ +R + R R P R S S R R
Sbjct: 66 TLNHTKIDGNEVKIIIAQNRRKSPETMKMYQRSVHKGRYRGHPYR-SDSSGKRIHRK--- 121
Query: 162 GRDYSPPPRRRNYSRSVS 179
RD S RR Y RS S
Sbjct: 122 -RDKSNEEGRRKYYRSKS 138
>gi|224002947|ref|XP_002291145.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972921|gb|EED91252.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 324
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 64/90 (71%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRN+ + +D++ F + G ++D+Y+PRD++S +P+GF FI++ P+ A EA+
Sbjct: 189 VSLLVRNVNGEISTQDLQMAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYATPEQAREARD 248
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRAR 131
M+ ++ GRE+ VV+A+E RK P++MR R
Sbjct: 249 EMNHFMMKGREIEVVYAQEKRKTPNEMRGR 278
>gi|70942643|ref|XP_741463.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519859|emb|CAH77253.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 254
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLL+RNL + P+ +R+ FE FG I+D+YLP D+Y+ PRGFGF+++ +P A EA
Sbjct: 6 CSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAKEALN 65
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMR 129
++ + G+E+ ++ A+ RK P M+
Sbjct: 66 ILNNSKIDGKEIRIIVAQNRRKSPDTMK 93
>gi|393906773|gb|EFO27553.2| hypothetical protein LOAG_00933 [Loa loa]
Length = 344
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 76/119 (63%), Gaps = 6/119 (5%)
Query: 30 GRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ 89
GR G R ++PT L VR + + RP+D+R FE+ G ++D+Y+P DYY+ E RGF +++
Sbjct: 3 GRSGRYRDDEIPT-LYVRQVHYSARPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVK 61
Query: 90 FVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARE-----RGRGRFRRRSP 143
F DA +A R ++G +LGR + V +AE RK ++MRAR+ R R R+R RSP
Sbjct: 62 FEFTRDAEDALRKLNGASILGRPIEVEWAEGQRKTKTEMRARDSYSSYRVRNRYRSRSP 120
>gi|156086728|ref|XP_001610772.1| Ser/Arg-rich splicing factor [Babesia bovis T2Bo]
gi|154798025|gb|EDO07204.1| Ser/Arg-rich splicing factor, putative [Babesia bovis]
Length = 188
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 56/87 (64%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRNL+++ P+ +R F +FG I+D+YLP DYY+ +PRGFGF++F DA EA R
Sbjct: 12 ASLLVRNLKYETSPDQLRAAFSRFGEIRDVYLPLDYYTRKPRGFGFVEFFSHSDADEAMR 71
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM 128
M G L G ++ V A+ R P M
Sbjct: 72 EMFGYELDGNKIEVFVAKHGRSDPYQM 98
>gi|399217453|emb|CCF74340.1| unnamed protein product [Babesia microti strain RI]
Length = 203
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 32 YGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFV 91
Y GGR SLLVRNL+++ PE +R FE+FG I+D+Y+P +YY+ +PRGFGF++F
Sbjct: 29 YRGGR----TMSLLVRNLKYETTPEILREAFEKFGPIRDVYIPLEYYTKKPRGFGFVEFH 84
Query: 92 EPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDM 128
+ DA A R MDG L G ++ V A+ R P M
Sbjct: 85 DFRDANMALREMDGGELDGNKIEVFAAKRGRSDPYQM 121
>gi|426224259|ref|XP_004006291.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Ovis
aries]
Length = 262
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 62/91 (68%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R D+RR F ++G + D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRYGDLRREFGRYGPVVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+ +E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKGKE 100
>gi|219118652|ref|XP_002180094.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408351|gb|EEC48285.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 106
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 62/88 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLL+RN+ D + +D+ F + G ++D+Y+PRD++S +P+GF FI++ + A EA+
Sbjct: 18 VSLLIRNVAPDIQSQDLLTAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYATAEQAREARD 77
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMR 129
MD V+ GREL VVFA+E RK P++MR
Sbjct: 78 EMDRFVVRGRELEVVFAQERRKTPTEMR 105
>gi|18203864|gb|AAH21715.1| Serine-arginine repressor protein (35 kDa) [Homo sapiens]
gi|123982510|gb|ABM82996.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
gi|123997175|gb|ABM86189.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
Length = 261
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 63/92 (68%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL +RN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + A +A
Sbjct: 10 TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRGAEDALY 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 NLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|156098735|ref|XP_001615383.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804257|gb|EDL45656.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1057
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLL++NL PE IR+ F+ FG I+D+YLP D+Y+ PRGFGF+++ EP A EA
Sbjct: 6 CSLLIKNLSFHTSPEKIRKIFQSFGRIRDVYLPLDHYTRRPRGFGFVEYYEPQYAKEALT 65
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERG 134
++ + G+E+ ++ A+ RK P M+ + G
Sbjct: 66 ILNHSKIDGKEIKIIIAQNRRKSPETMKMYQHG 98
>gi|348526131|ref|XP_003450574.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 257
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 66/99 (66%), Gaps = 7/99 (7%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ-------FVEPD 94
TSL VRN+ + RPED+RR F ++G I D+Y+P D+Y+ PRGF +IQ F +
Sbjct: 10 TSLFVRNIADESRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQYPLFFHMFEDVR 69
Query: 95 DAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
DA +A ++D + + GR++ + FA+ +RK P+ M+A+ER
Sbjct: 70 DAEDALHNLDRKWVCGRQIEIQFAQGDRKTPNQMKAKER 108
>gi|118481107|gb|ABK92507.1| unknown [Populus trichocarpa]
Length = 149
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 80/118 (67%), Gaps = 15/118 (12%)
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERG--RGRF-------RRRSPPPRYSRSPPP 153
MDG+V LGRELTVVFAEENRKKP DMRARER RGR R S PR+SRSPPP
Sbjct: 1 MDGRVFLGRELTVVFAEENRKKPVDMRARERTATRGRVGDRRRSPPRYSRSPRHSRSPPP 60
Query: 154 RYARSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQ 211
R A S S+ RDY PP+RR+ SRSVSP RER YS+ +Y R S++P+RGQ
Sbjct: 61 RNATSRSHSRDYYSPPKRRHPSRSVSP------RERRYSQERSYSRSRSHSQTPNRGQ 112
>gi|354466061|ref|XP_003495494.1| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Cricetulus griseus]
Length = 249
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 61/88 (69%)
Query: 46 VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDG 105
VRN D RPED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A +++
Sbjct: 2 VRNCAGDSRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNR 61
Query: 106 QVLLGRELTVVFAEENRKKPSDMRARER 133
+ + GR++ + FA+ +RK P M+++ER
Sbjct: 62 KWVCGRQIEIQFAQGDRKTPGQMKSKER 89
>gi|401408831|ref|XP_003883864.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
gi|325118281|emb|CBZ53832.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
Length = 192
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLL+RNL + P+ +R+ FE+FG ++D+YLP D+++ PRGFGF++F E A EA R
Sbjct: 5 CSLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEEAAAQEAMR 64
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMR 129
MD ++ G E+ V+ A++ RK P MR
Sbjct: 65 EMDRTMIDGNEVYVIIAQDRRKSPETMR 92
>gi|168042923|ref|XP_001773936.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674780|gb|EDQ61284.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 47/53 (88%)
Query: 81 EPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
EPRGFGFIQ+++P DAA+A+ HMD Q + GRE+TVVFAEENRKKPS+MR +ER
Sbjct: 52 EPRGFGFIQYLDPADAADAQYHMDRQFIAGREITVVFAEENRKKPSEMRVKER 104
>gi|323448916|gb|EGB04809.1| hypothetical protein AURANDRAFT_17068, partial [Aureococcus
anophagefferens]
Length = 112
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
S+LVRNL ED+R FE+FG++KD+Y+P DY + EPRGF FI+ +A EA
Sbjct: 13 VSVLVRNLTFKLSKEDLREEFEKFGSVKDVYIPLDYMTREPRGFAFIEMSCKAEADEAIA 72
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM 128
+DG+ L GR + V+ A + RK+P +M
Sbjct: 73 GLDGKDLDGRVIKVLLAAQKRKRPEEM 99
>gi|390480607|ref|XP_003735962.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 123
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+ +E
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKDKE 100
>gi|84996673|ref|XP_953058.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65304054|emb|CAI76433.1| RNA-binding protein, putative [Theileria annulata]
Length = 245
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S L+RNLR P+ +R FE+FG I+D+YLP D+ + PRGFGF++F + DA +A R
Sbjct: 8 STLLRNLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVRA 67
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDM 128
MD L G +T A++ RK PS M
Sbjct: 68 MDNTELDGSVITCCIAQDRRKSPSSM 93
>gi|71028770|ref|XP_764028.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350982|gb|EAN31745.1| hypothetical protein, conserved [Theileria parva]
Length = 245
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S L+RNLR P+ +R FE+FG I+D+YLP D+ + PRGFGF++F + DA +A R
Sbjct: 8 STLLRNLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVRA 67
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDM 128
MD L G +T A++ RK PS M
Sbjct: 68 MDNTELDGSVITCCIAQDRRKSPSSM 93
>gi|403224014|dbj|BAM42144.1| Ser/Arg-rich splicing factor [Theileria orientalis strain Shintoku]
Length = 267
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S LVRNLR P+ +R FE+FG I+D+YLP D+ + PRGFGF+++ E DA +A +
Sbjct: 8 STLVRNLRFSTTPQVVREAFERFGKIRDVYLPLDFNTKRPRGFGFVEYYEKSDAVDAVKA 67
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDM 128
MD L G + A++ RK PS M
Sbjct: 68 MDNTDLDGSIINCCLAQDRRKSPSSM 93
>gi|297478612|ref|XP_002690241.1| PREDICTED: uncharacterized protein LOC787762 [Bos taurus]
gi|296484064|tpg|DAA26179.1| TPA: serine-arginine repressor protein (35kDa) (SRrp35)-like [Bos
taurus]
Length = 268
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ-----FVEPD-- 94
TSL VRN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D
Sbjct: 10 TSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVR 69
Query: 95 DAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
DA +A +++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 DAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|402853376|ref|XP_003891372.1| PREDICTED: serine/arginine-rich splicing factor 10 [Papio anubis]
Length = 261
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ D R ED+RR F ++G I D+Y+P D+Y+ PRG I F + DA +A
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGL-LITFEDVRDAEDALH 68
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
++D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 69 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 99
>gi|414877624|tpg|DAA54755.1| TPA: hypothetical protein ZEAMMB73_495943 [Zea mays]
Length = 474
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 72 YLPRDYYSGE--PRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMR 129
YL +D G FGFIQ+ +P+DA++AK HMDG++LLGRE+ VVFAEENRKKP+DMR
Sbjct: 201 YLHKDNEKGNWNLEDFGFIQYFDPEDASDAKYHMDGKMLLGREIAVVFAEENRKKPADMR 260
Query: 130 ARER 133
ARE+
Sbjct: 261 AREK 264
>gi|307133716|ref|NP_001182514.1| splicing factor, arginine/serine-rich 13B [Macaca mulatta]
gi|402867628|ref|XP_003897943.1| PREDICTED: serine/arginine-rich splicing factor 12 [Papio anubis]
Length = 267
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 65/98 (66%), Gaps = 6/98 (6%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ----FVEPD--D 95
TSL +RN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D D
Sbjct: 10 TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLLFIFEDVRD 69
Query: 96 AAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
A +A +++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 AEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 107
>gi|126310597|ref|XP_001376489.1| PREDICTED: serine/arginine-rich splicing factor 12-like
[Monodelphis domestica]
Length = 257
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 64/101 (63%), Gaps = 9/101 (8%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ---------FVE 92
TSL VRN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF +IQ F +
Sbjct: 10 TSLFVRNVTDATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQYPLFHSLVIFED 69
Query: 93 PDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
DA +A +++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 VRDAEDALYNLNKKWVCGRQIEIQFAQGDRKTPGQMKSKER 110
>gi|296198765|ref|XP_002746858.1| PREDICTED: serine/arginine-rich splicing factor 12 [Callithrix
jacchus]
Length = 268
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ-----FVEPD-- 94
TSL +RN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D
Sbjct: 10 TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVR 69
Query: 95 DAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
DA +A +++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 DAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 61/87 (70%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLV+NL+++ P+ +R F ++G I+D+YLP DYY+ +PRGFGF++F + +DA EA R
Sbjct: 13 ISLLVKNLKYETSPDKVRSLFSRYGEIRDVYLPLDYYTKKPRGFGFVEFYKEEDADEALR 72
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM 128
MDG+ + G ++ V A+ R P +M
Sbjct: 73 GMDGEEIDGNKVEVFPAKHGRSDPREM 99
>gi|114608450|ref|XP_518634.2| PREDICTED: serine/arginine-rich splicing factor 12 [Pan
troglodytes]
Length = 268
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ-----FVEPD-- 94
TSL +RN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D
Sbjct: 10 TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVR 69
Query: 95 DAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
DA +A +++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 DAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|413955615|gb|AFW88264.1| hypothetical protein ZEAMMB73_484317, partial [Zea mays]
Length = 148
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 63/79 (79%), Gaps = 6/79 (7%)
Query: 3 GRSYTPSP-PPRGSGGGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDIRR 60
GRSY SP PPRG Y RR RSPSPRGRYGG RDLPTSLLVRNLR DCRP+D+RR
Sbjct: 73 GRSYNHSPSPPRG----YRRRTRSPSPRGRYGGRDTDRDLPTSLLVRNLRRDCRPDDLRR 128
Query: 61 PFEQFGAIKDIYLPRDYYS 79
PF +FG +KDIYLP+DYY+
Sbjct: 129 PFGKFGPVKDIYLPKDYYT 147
>gi|56118384|ref|NP_001007946.1| serine/arginine-rich splicing factor 12 [Xenopus (Silurana)
tropicalis]
gi|51513232|gb|AAH80452.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
gi|89272962|emb|CAJ83214.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
Length = 253
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 28/202 (13%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VRN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF +IQF + DA +A
Sbjct: 10 TSLFVRNVADATRPEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQFEDVRDAEDALY 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSY 161
+++ + + GR++ + FA+ +RK P M+++ER P RS R+ S
Sbjct: 70 NLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER------HACSPVDRRRSRSHSRRRTRSR 123
Query: 162 GRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSWSPSRSR 221
+ RR +S +YS +S RS+SP R RSR
Sbjct: 124 SSSWDRGRRRSGSLKSSRHRRHSYSHSKS------------RSKSPQR---------RSR 162
Query: 222 TPKRNHSVSRSRSRSPRREYSG 243
TP+R HS SR RSRS + SG
Sbjct: 163 TPQR-HSFSRGRSRSMEKSPSG 183
>gi|119568946|gb|EAW48561.1| serine-arginine repressor protein (35 kDa), isoform CRA_a [Homo
sapiens]
Length = 262
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPD-DAAEAK 100
TSL +RN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF ++ E DA +A
Sbjct: 10 TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDAL 69
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 YNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 102
>gi|443711870|gb|ELU05439.1| hypothetical protein CAPTEDRAFT_124300 [Capitella teleta]
Length = 135
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQF----VEPDDAA 97
TSL VRN+ R E++R F ++G I D+YLP D+Y+ PRGF +IQ+ ++P DA
Sbjct: 10 TSLYVRNVPDTTRSEELRSLFGKYGPISDVYLPLDFYTRRPRGFSYIQYPSFSIDPRDAE 69
Query: 98 EAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERG 134
+A H+D G +L + FA +RK PS MR +ERG
Sbjct: 70 DALYHLDRTRFFGCDLEIEFARGDRKTPSQMRTKERG 106
>gi|68065706|ref|XP_674837.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56493667|emb|CAH97904.1| conserved hypothetical protein [Plasmodium berghei]
Length = 245
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLL+RNL + P+ +R+ FE FG I+D+YLP D+Y+ PRGFGF+++ +P A EA
Sbjct: 6 CSLLIRNLSFET-PDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAKEALN 64
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMR 129
++ + G+E+ ++ A+ RK P M+
Sbjct: 65 ILNNSKIDGKEIRIIVAQNRRKSPDTMK 92
>gi|159471227|ref|XP_001693758.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283261|gb|EDP09012.1| predicted protein [Chlamydomonas reinhardtii]
Length = 86
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S+LVRN+ +D+R+ FE+FG ++D+Y+PRDYY+ RGFGFI+F + DA EA
Sbjct: 1 SVLVRNIPLHMTVDDLRKKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDADEAIYQ 60
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDM 128
+D + GRE+ V ++E RK P DM
Sbjct: 61 LDKTSIDGREINVCLSKEGRKTPRDM 86
>gi|327261517|ref|XP_003215576.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Anolis
carolinensis]
Length = 261
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 64/97 (65%), Gaps = 5/97 (5%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ-----FVEPDDA 96
TSL VRN+ RPED+R F ++G + D+Y+P D+Y+ PRGF +IQ F + DA
Sbjct: 10 TSLFVRNVADATRPEDLRHEFGRYGPVVDVYVPLDFYTRRPRGFAYIQYPLFMFEDVRDA 69
Query: 97 AEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+A +++ + + GR++ + FA+ +RK P+ M+++ER
Sbjct: 70 EDALYNLNRKWVCGRQIEIQFAQGDRKTPNQMKSKER 106
>gi|448878238|gb|AGE46082.1| arginine/serine-rich splicing factor SCL25A transcript II [Zea
mays]
Length = 80
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 63/79 (79%), Gaps = 6/79 (7%)
Query: 3 GRSYTPSP-PPRGSGGGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDIRR 60
GRSY SP PPRG Y RR RSPSPRGRYGG RDLPTSLLVRNLR DCRP+D+RR
Sbjct: 2 GRSYNHSPSPPRG----YRRRTRSPSPRGRYGGRDTDRDLPTSLLVRNLRRDCRPDDLRR 57
Query: 61 PFEQFGAIKDIYLPRDYYS 79
PF +FG +KDIYLP+DYY+
Sbjct: 58 PFGKFGPVKDIYLPKDYYT 76
>gi|397567508|gb|EJK45626.1| hypothetical protein THAOC_35749 [Thalassiosira oceanica]
Length = 359
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 11/109 (10%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPR-------GFGFIQFVEPD 94
SLLVRN+ + +D+++ F + G ++D+Y+P DY+S +P+ GF FI++ P
Sbjct: 154 VSLLVRNVSSEITSQDLQQAFSRIGEVRDVYIPMDYHSHQPKVRAFNDPGFAFIEYATPA 213
Query: 95 DAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRAR----ERGRGRFR 139
A EA+ MD + G L VVFA++ RK P +MR R ++GRGR R
Sbjct: 214 MAREAREEMDRFKIKGCNLEVVFAQQKRKTPHEMRGRGPPSDQGRGRAR 262
>gi|156407025|ref|XP_001641345.1| predicted protein [Nematostella vectensis]
gi|156228483|gb|EDO49282.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPD--DAAEA 99
+S+ VRNL D RP+D+RR F ++G I D+Y+P DYY+ EPRGF +I D DA +A
Sbjct: 10 SSIYVRNLHPDTRPDDLRRMFGKYGRITDVYIPLDYYTREPRGFCYIYITFEDIRDAEDA 69
Query: 100 KRHMDGQVLLGRELTVVFAEENRK 123
++D +LLGREL V FAE +RK
Sbjct: 70 LYYLDRAMLLGRELEVQFAEGDRK 93
>gi|448878240|gb|AGE46083.1| arginine/serine-rich splicing factor SCL25A transcript III [Zea
mays]
Length = 77
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 63/79 (79%), Gaps = 6/79 (7%)
Query: 3 GRSYTPSP-PPRGSGGGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDIRR 60
GRSY SP PPRG Y RR RSPSPRGRYGG RDLPTSLLVRNLR DCRP+D+RR
Sbjct: 2 GRSYNHSPSPPRG----YRRRTRSPSPRGRYGGRDTDRDLPTSLLVRNLRRDCRPDDLRR 57
Query: 61 PFEQFGAIKDIYLPRDYYS 79
PF +FG +KDIYLP+DYY+
Sbjct: 58 PFGKFGPVKDIYLPKDYYT 76
>gi|324520554|gb|ADY47664.1| Serine/arginine-rich splicing factor 12 [Ascaris suum]
Length = 183
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 60/94 (63%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D T+L VR + + RPED+R FE+ G ++D+Y+P DYY+ E RGF ++++ DA
Sbjct: 11 DEGTTLYVRQVHYAARPEDLRTLFERMGPVRDVYIPLDYYTHESRGFAYVKYEYVGDAER 70
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
A + + G +LGR + + +A+ RK ++MR +E
Sbjct: 71 AYKQLHGCAILGRRIAIDWAQGERKTKAEMREKE 104
>gi|226481705|emb|CAX79118.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+SL +R+L CR +D+RR F ++G I D+ +P D+++G +G+ FI+F P DA +A
Sbjct: 6 SSLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHY 65
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+MD +GR++ V F RK P++MR +ER
Sbjct: 66 YMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|301106558|ref|XP_002902362.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098982|gb|EEY57034.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 373
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQ-FGAIKDIYLPRDYYSGEPRGFGFIQFVE 92
RGR P SLLVRNL D +++RR F + G I D+Y+P++Y S PRGF FI+F +
Sbjct: 103 ADRGRREPISLLVRNLSPDTTGDELRRAFSRRAGDILDVYIPKEYSSNRPRGFAFIEFAD 162
Query: 93 PDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMR 129
+ K MD L GRE+ V+FA+++RK P +MR
Sbjct: 163 ARVGRDVKFEMDRTQLGGREIAVLFAKQHRKSPQEMR 199
>gi|172046472|emb|CAQ34908.1| SR family splicing factor SC35 [Chironomus tentans]
Length = 167
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 53/77 (68%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G++ DIY+PRD ++ E RGF F++F E DA EA +
Sbjct: 15 ISLKVDNLTYRTTPEDLRRVFERCGSVGDIYIPRDRHTRESRGFAFVRFYEKRDAEEALQ 74
Query: 102 HMDGQVLLGRELTVVFA 118
MDG+VL GREL V A
Sbjct: 75 EMDGRVLDGRELRVQMA 91
>gi|29841102|gb|AAP06115.1| similar to NM_080743 serine-arginine repressor protein (35 kDa) in
Homo sapiens [Schistosoma japonicum]
gi|226476576|emb|CAX72180.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481266|emb|CAX79098.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481268|emb|CAX79099.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481270|emb|CAX79100.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481274|emb|CAX79102.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481276|emb|CAX79103.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481278|emb|CAX79104.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481280|emb|CAX79105.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481282|emb|CAX79106.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481284|emb|CAX79107.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481286|emb|CAX79108.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481288|emb|CAX79109.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481292|emb|CAX79111.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481294|emb|CAX79112.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481300|emb|CAX79114.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481699|emb|CAX79115.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481701|emb|CAX79116.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+SL +R+L CR +D+RR F ++G I D+ +P D+++G +G+ FI+F P DA +A
Sbjct: 6 SSLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHY 65
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+MD +GR++ V F RK P++MR +ER
Sbjct: 66 YMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|226476570|emb|CAX72177.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481290|emb|CAX79110.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481296|emb|CAX79113.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+SL +R+L CR +D+RR F ++G I D+ +P D+++G +G+ FI+F P DA +A
Sbjct: 6 SSLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHY 65
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+MD +GR++ V F RK P++MR +ER
Sbjct: 66 YMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|442761097|gb|JAA72707.1| Putative splicing factor sc35, partial [Ixodes ricinus]
Length = 226
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+SL +RN+ RPED+R F ++G I D+Y+P DYY+ PRGF ++QF + DA +A
Sbjct: 32 SSLFIRNVPDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQFEDLRDAEDAMY 91
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM 128
+D GREL + FA+ +RK PS+M
Sbjct: 92 SLDRTRFYGRELEIEFAQGDRKTPSEM 118
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
+LV NL + C +D+R FE+FG I +++LP D SG+ +GF F+ +V P DA +A M
Sbjct: 215 ILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNEM 274
Query: 104 DGQVLLGRELTVVFA 118
DGQV+ GR + V +A
Sbjct: 275 DGQVIKGRIIHVNYA 289
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T LLV+NL + ++R F +G ++ + +P+ G+ +G+ FI++ +AA AK
Sbjct: 604 TKLLVKNLPFETNLNEVRELFRVYGTLRGVRVPKKI-DGQLKGYAFIEYATKQEAANAKA 662
Query: 102 HMDGQVLLGRELTVVFAEE 120
M L GR L + FA+E
Sbjct: 663 AMANSHLYGRHLVIEFAKE 681
>gi|226481272|emb|CAX79101.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+SL +R+L CR +D+RR F ++G I D+ +P D+++G +G+ FI+F P DA +A
Sbjct: 6 SSLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFGNPRDAEDAHY 65
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+MD +GR++ V F RK P++MR +ER
Sbjct: 66 YMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|402593936|gb|EJW87863.1| hypothetical protein WUBG_01225 [Wuchereria bancrofti]
Length = 103
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 30 GRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ 89
GR G R ++PT L VR + + RP+D+R FEQ G ++D+Y+P DYY+ E RGF +++
Sbjct: 3 GRRGSYRDDEIPT-LYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVK 61
Query: 90 FVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPS 126
F DA +A R ++G +LGR + V +AE RK +
Sbjct: 62 FEFTRDAEDALRELNGTSILGRRIEVEWAEGQRKSTA 98
>gi|395521768|ref|XP_003764987.1| PREDICTED: serine/arginine-rich splicing factor 10 [Sarcophilus
harrisii]
Length = 347
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 59/89 (66%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L V L D ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A ++
Sbjct: 97 LRVWRLVKDAGSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNL 156
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARE 132
D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 157 DRKWICGRQIEIQFAQGDRKTPNQMKAKE 185
>gi|255084900|ref|XP_002504881.1| predicted protein [Micromonas sp. RCC299]
gi|226520150|gb|ACO66139.1| predicted protein [Micromonas sp. RCC299]
Length = 85
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLVR L D R E++ F ++G + D+Y+PRDYY+ P+G F+QF P++AA+A+R
Sbjct: 1 SLLVRQLPPDARAEELEEAFSKYGKVIDVYIPRDYYTKRPKGIAFVQFPNPEEAADAERA 60
Query: 103 MDGQVLLGRE-LTVVFAEENRKKPS 126
+DG L G E ++V A + RK PS
Sbjct: 61 LDGTTLCGVENISVQVALQKRKDPS 85
>gi|303282859|ref|XP_003060721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458192|gb|EEH55490.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 93
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 64/95 (67%), Gaps = 3/95 (3%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SLLVRNL +D E+IR FE++G ++D+Y+P+DY++ P+GF F++F +P +A A+
Sbjct: 1 VSLLVRNLPYDATVEEIRTAFEEYGEVRDVYIPKDYHTKRPKGFAFVEFPDPREAELAED 60
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
+D L G E++V A++ RK PS ++GRG
Sbjct: 61 KLDKTRLCGVEVSVQVAKQKRKDPSFF---QQGRG 92
>gi|256076749|ref|XP_002574672.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|360045341|emb|CCD82889.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 210
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+SL +R+L CR +D+RR F ++G I D+ +P D+++G +G+ FI+F P DA +A
Sbjct: 6 SSLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHY 65
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+MD +GR++ V F RK P++MR +ER
Sbjct: 66 YMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|226476572|emb|CAX72178.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226476574|emb|CAX72179.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 125
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+SL +R+L CR +D+RR F ++G I D+ +P D+++G +G+ FI+F P DA +A
Sbjct: 6 SSLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHY 65
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+MD +GR++ V F RK P++MR +ER
Sbjct: 66 YMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|47209886|emb|CAF94406.1| unnamed protein product [Tetraodon nigroviridis]
Length = 98
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPD--DAAEA 99
TSL VRN+ + RPED+RR F ++G I D+Y+P D+Y+ +PRGF +IQ++ D DA +A
Sbjct: 10 TSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQYIFEDVRDAEDA 69
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPS 126
+D + + GR++ + FA+ +RK S
Sbjct: 70 LHSLDRKWVCGRQIEIQFAQGDRKSKS 96
>gi|226481703|emb|CAX79117.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 115
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+SL +R+L CR +D+RR F ++G I D+ +P D+++G +G+ FI+F P DA +A
Sbjct: 6 SSLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHY 65
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+MD +GR++ V F RK P++MR +ER
Sbjct: 66 YMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V N+ ++ +D+RR FE++G + D+Y+PRD +GEPRGF F++F++ DA +A
Sbjct: 27 VTLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAID 86
Query: 102 HMDGQVLLGRELTVVFAEENR 122
MDG+ GREL + +A++ R
Sbjct: 87 RMDGEFFAGRELRIQYAKKRR 107
>gi|354485618|ref|XP_003504980.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cricetulus
griseus]
Length = 172
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 59/89 (66%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
+ V L R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A ++
Sbjct: 1 MYVEILEACFRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNL 60
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARE 132
D + + GR++ + FA+ +RK P+ M+A+E
Sbjct: 61 DRKWICGRQIEIQFAQGDRKTPNQMKAKE 89
>gi|344264100|ref|XP_003404132.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Loxodonta
africana]
Length = 387
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 57/80 (71%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGREL 113
+PED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A +++ + + GR++
Sbjct: 148 QPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQI 207
Query: 114 TVVFAEENRKKPSDMRARER 133
+ FA+ +RK P M+++ER
Sbjct: 208 EIQFAQGDRKTPGQMKSKER 227
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu rubripes]
Length = 229
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PE +RR FE++G + D+Y+PRD Y+ E RGF F++F++ DA +A
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPR 146
MDG +L GREL V A R P M + RRS PPR
Sbjct: 74 AMDGALLDGRELRVQMARYGR-PPDSM---------YSRRSAPPR 108
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PE +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG +L GREL V A
Sbjct: 74 AMDGAILDGRELRVQMA 90
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA +
Sbjct: 20 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAED 79
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A MDG++L GREL V A
Sbjct: 80 ALEAMDGRMLDGRELRVQMA 99
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|194685575|ref|XP_001788719.1| PREDICTED: serine/arginine-rich splicing factor 12, partial [Bos
taurus]
Length = 145
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ-----FVEPD-- 94
TSL VRN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D
Sbjct: 10 TSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVR 69
Query: 95 DAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
DA +A +++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 DAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 10/104 (9%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PE +RR FE++G + D+Y+PRD Y+ E RGF F++F++ DA +A
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPP 145
MDG +L GREL V A R P M + RR PPP
Sbjct: 74 AMDGALLDGRELRVQMARYGR-PPDSM---------YSRRGPPP 107
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PE +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PE +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA +
Sbjct: 20 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAED 79
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A MDG++L GREL V A
Sbjct: 80 ALEAMDGRMLDGRELRVQMA 99
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA +
Sbjct: 20 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAED 79
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A MDG++L GREL V A
Sbjct: 80 ALEAMDGRMLDGRELRVQMA 99
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|195351055|ref|XP_002042052.1| GM26218 [Drosophila sechellia]
gi|195578745|ref|XP_002079224.1| GD22120 [Drosophila simulans]
gi|194123876|gb|EDW45919.1| GM26218 [Drosophila sechellia]
gi|194191233|gb|EDX04809.1| GD22120 [Drosophila simulans]
Length = 195
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA +
Sbjct: 20 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAED 79
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A MDG++L GREL V A
Sbjct: 80 ALEAMDGRMLDGRELRVQMA 99
>gi|332208823|ref|XP_003253510.1| PREDICTED: serine/arginine-rich splicing factor 8 [Nomascus
leucogenys]
Length = 303
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+P ++ + PRGF F++F + DA +
Sbjct: 11 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEHRTKAPRGFAFVRFHDWSDAQD 70
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRARE-RGR---GRFRRRSPPPR 146
A+ MDG VL GREL V A R+ S E RGR GR+ RRS PR
Sbjct: 71 AEAAMDGAVLDGRELRVQVARYGRRDLSGSSQEEPRGRSWGGRYGRRSRSPR 122
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu rubripes]
Length = 225
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PE +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 VSLKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFFDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG +L GREL V A
Sbjct: 74 AMDGALLDGRELRVQMA 90
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA +
Sbjct: 22 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAED 81
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A MDG++L GREL V A
Sbjct: 82 ALEAMDGRMLDGRELRVQMA 101
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA +
Sbjct: 21 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAED 80
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A MDG++L GREL V A
Sbjct: 81 ALEAMDGRMLDGRELRVQMA 100
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D TSL V NL + PED++R FE++G + D+Y+PR Y+ E RGF F++F + D +
Sbjct: 11 DGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCED 70
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A +DG +L GREL V A
Sbjct: 71 AMDSLDGYILDGRELRVQMA 90
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 241
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRR 140
MDG VL GREL V A R P +R G G +RR
Sbjct: 74 AMDGAVLDGRELRVQMARYGR-PPDSHHSRRGGNGVWRR 111
>gi|426222784|ref|XP_004005562.1| PREDICTED: serine/arginine-rich splicing factor 10 [Ovis aries]
Length = 225
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 55/77 (71%)
Query: 56 EDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A ++D + + GR++ +
Sbjct: 66 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 125
Query: 116 VFAEENRKKPSDMRARE 132
FA+ +RK P+ M+A+E
Sbjct: 126 QFAQGDRKTPNQMKAKE 142
>gi|393906774|gb|EJD74392.1| hypothetical protein, variant [Loa loa]
Length = 324
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
Query: 49 LRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVL 108
+R RP+D+R FE+ G ++D+Y+P DYY+ E RGF +++F DA +A R ++G +
Sbjct: 1 MRLFSRPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRKLNGASI 60
Query: 109 LGRELTVVFAEENRKKPSDMRARE-----RGRGRFRRRSP 143
LGR + V +AE RK ++MRAR+ R R R+R RSP
Sbjct: 61 LGRPIEVEWAEGQRKTKTEMRARDSYSSYRVRNRYRSRSP 100
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PE +RR FE++G + D+Y+PRD Y+ E RGF F++F++ DA +A
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG +L GREL V A
Sbjct: 74 AMDGALLDGRELRVQMA 90
>gi|168042827|ref|XP_001773888.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674732|gb|EDQ61236.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 370
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 81 EPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+PRGFGF+QF++P DAAEA+ ++D + + GRE+T+VFAEENRK+P +MR +ER
Sbjct: 156 QPRGFGFVQFLDPQDAAEAQYYLDHEFIAGREITIVFAEENRKRPQEMRLKER 208
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 58/89 (65%), Gaps = 12/89 (13%)
Query: 1 MRGRS--YTP----SPPPRGSGGGYGRRGRSPSP---RGRYGGGRGRDLPTSLLVRNLRH 51
MRGRS Y+ S PPR GYG R RS SP RGR R + PTSLLVRN+
Sbjct: 1 MRGRSPYYSDRRGYSSPPRS---GYGGRRRSLSPLPGRGRGDYVREPEPPTSLLVRNIPR 57
Query: 52 DCRPEDIRRPFEQFGAIKDIYLPRDYYSG 80
D +D+R PFE++GAIKD+YLPRDYY+G
Sbjct: 58 DFTADDLRIPFERYGAIKDVYLPRDYYTG 86
>gi|410966510|ref|XP_003989775.1| PREDICTED: serine/arginine-rich splicing factor 10 [Felis catus]
Length = 191
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 56/79 (70%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGREL 113
R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A ++D + + GR++
Sbjct: 40 RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQI 99
Query: 114 TVVFAEENRKKPSDMRARE 132
+ FA+ +RK P+ M+A+E
Sbjct: 100 EIQFAQGDRKTPNQMKAKE 118
>gi|346469351|gb|AEO34520.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+SL +RN+ RP+D+R F ++G + D+Y+P DYY+ PRGF ++QF + DA +A
Sbjct: 11 SSLFIRNVPDGTRPDDLRSLFGKYGPLTDVYIPVDYYTRRPRGFAYVQFEDLRDAEDAMY 70
Query: 102 HMDGQVLLGRELTVVFAEENRKKPS 126
+D GREL + FA+ +RK PS
Sbjct: 71 SLDRTRFYGRELEIEFAQGDRKTPS 95
>gi|300176090|emb|CBK23401.2| unnamed protein product [Blastocystis hominis]
Length = 259
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 22 RGRSPSPRG---RYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYY 78
R RSP RG RYG SL+VR R +I+ F ++G + D+++PRDYY
Sbjct: 82 RSRSPVRRGGAERYGTNPNH---CSLIVRGFRDVVDRSEIQNIFSKYGNVHDVHIPRDYY 138
Query: 79 SGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDM 128
+ + RGF FI+F + A +A H+DG+ + G ++V A+ NRK ++M
Sbjct: 139 THKQRGFAFIEFENREQAEDAISHLDGRSVCGSTVSVSIAKNNRKTSAEM 188
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PE +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PE +RR FE++G + D+Y+PRD YS E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG +L GREL V A
Sbjct: 74 AMDGALLDGRELRVQMA 90
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PE +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|325191972|emb|CCA26441.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 248
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQF-GAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
P SLLVRNL +D+RR F + G I+D+Y+P+D+ + E R F F++F + +A E
Sbjct: 142 PQSLLVRNLNPKTTGDDLRRAFSRRPGDIRDVYIPKDHSTNELRTFAFVEFRDAREAREV 201
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMR 129
K MD L G E+ V+FA++ RK P MR
Sbjct: 202 KYEMDRTTLDGNEIAVLFAQQRRKTPDQMR 231
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|226423972|gb|ACO53091.1| MIP01221p [Drosophila melanogaster]
Length = 195
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + P+D+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA +
Sbjct: 20 DGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAED 79
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A MDG++L GREL V A
Sbjct: 80 ALEAMDGRMLDGRELRVQMA 99
>gi|114613263|ref|XP_519086.2| PREDICTED: uncharacterized protein LOC463398 isoform 2 [Pan
troglodytes]
Length = 293
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+PR+ ++ PRGF F++F + DA +
Sbjct: 11 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRSDAQD 70
Query: 99 AKRHMDGQVLLGRELTVVFAEENRK 123
A+ MDG VL GREL V A R+
Sbjct: 71 AEAAMDGAVLDGRELRVQMARYGRR 95
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|194861231|ref|XP_001969737.1| GG10262 [Drosophila erecta]
gi|190661604|gb|EDV58796.1| GG10262 [Drosophila erecta]
Length = 195
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA +
Sbjct: 20 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAED 79
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A MDG++L GREL V A
Sbjct: 80 ALEAMDGRMLDGRELRVQMA 99
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PE +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG +L GREL V A
Sbjct: 74 AMDGALLDGRELRVQMA 90
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PED+RR F+++G + D+Y+PRD ++ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG ++ GREL V A
Sbjct: 74 SMDGAIMDGRELRVQMA 90
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA +
Sbjct: 21 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAED 80
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A MDG++L GREL V A
Sbjct: 81 ALEAMDGRMLDGRELRVQMA 100
>gi|297678669|ref|XP_002817185.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Pongo abelii]
Length = 261
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL +RN+ RPED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +
Sbjct: 10 TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDXLF 69
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSY 161
+ + GR++ + FA+ +RK P M+++ER P P + RS S
Sbjct: 70 ITHRKWVCGRQIEIQFAQGDRKTPGQMKSKERH----------P----CSPSDHRRSRSP 115
Query: 162 GRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQSWSPSRSR 221
+ + SR R +S Y + RS+S R+S S +SR
Sbjct: 116 SQRRTRSRSSSWGRNRRRSDSLKESRHRRFS----YSQSKSRSKSL---PRRSTSARQSR 168
Query: 222 TPKRNHSVSRSRSRSPRREYSGERNGDRPPS 252
TP+RN SR RSRS + + G P S
Sbjct: 169 TPRRNFG-SRGRSRSKSLQKRSKSIGKSPSS 198
>gi|83286039|ref|XP_729987.1| dentin phosphoryn [Plasmodium yoelii yoelii 17XNL]
gi|23489341|gb|EAA21552.1| dentin phosphoryn [Plasmodium yoelii yoelii]
Length = 793
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 58/87 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLL+RNL + P+ +R+ FE FG I+D+YLP D+Y+ PRGFGF+++ +P A EA
Sbjct: 7 SLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAKEALNI 66
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMR 129
++ + G+E+ ++ A+ RK P M+
Sbjct: 67 LNNSKIDGKEIRIIVAQNRRKSPDTMK 93
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 11 PPRGSGGGYGRRGRSPSPRGRYGGGRGRDLP--TSLLVRNLRHDCRPEDIRRPFEQFGAI 68
PPR G RG P R G D+ TSL V NL + P+ +RR FE++G +
Sbjct: 47 PPRAEDTGDSSRGSGPPLRAMSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRV 106
Query: 69 KDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
D+Y+PRD Y+ E RGF F++F + DA +A MDG VL GREL V A
Sbjct: 107 GDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 156
>gi|114050755|ref|NP_001040152.1| Sr protein [Bombyx mori]
gi|87248221|gb|ABD36163.1| Sr protein [Bombyx mori]
Length = 154
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F E DA EA
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG++L GREL V A
Sbjct: 74 TMDGRMLDGRELRVQMA 90
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 59/105 (56%), Gaps = 10/105 (9%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPR 146
MDG VL GREL V A R S RR PPPR
Sbjct: 74 AMDGAVLDGRELRVQMARYGRPPDS----------HHSRRGPPPR 108
>gi|428172429|gb|EKX41338.1| hypothetical protein GUITHDRAFT_142043 [Guillardia theta CCMP2712]
Length = 137
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 55/77 (71%)
Query: 56 EDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
E+++ FE+FG ++D+Y+P DY++ P+ F FI+F+ DDA +AK +D + + GR+++V
Sbjct: 20 EEVKSVFERFGKVRDVYIPTDYHTKRPKPFAFIEFLNGDDARDAKDELDNREICGRKVSV 79
Query: 116 VFAEENRKKPSDMRARE 132
++A+ R P MRAR+
Sbjct: 80 LYAQRGRTTPDQMRARD 96
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
+V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA +A M
Sbjct: 48 CVVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 107
Query: 104 DGQVLLGRELTVVFA 118
DG++L GREL V A
Sbjct: 108 DGRMLDGRELRVQMA 122
>gi|241100004|ref|XP_002409732.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492805|gb|EEC02446.1| conserved hypothetical protein [Ixodes scapularis]
Length = 211
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQF-VEPDDAAEAK 100
+SL VRNL RPED+R F + G + D+Y+P DY++ PRGFG++Q+ + DA +AK
Sbjct: 11 SSLFVRNLPDGTRPEDLRSFFSKHGPLTDVYIPMDYHTRRPRGFGYVQYPLYLRDAEDAK 70
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDM 128
+D GRE+ + FA +RK P++M
Sbjct: 71 YALDKARFCGREIEIEFARGDRKTPTEM 98
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Oreochromis
niloticus]
Length = 218
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PE +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG +L GREL V A
Sbjct: 74 AMDGALLDGRELRVQMA 90
>gi|17532817|ref|NP_495013.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
gi|3929375|sp|Q09511.1|RSP4_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 4;
AltName: Full=CeSC35; AltName: Full=RNA-binding protein
srp-2
gi|351060987|emb|CCD68734.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
Length = 196
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL + NL + P D+RR FE++G I D+++PRD YS + +GFGF++F E DA A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSD 127
DG+++ GREL V A+ +R PSD
Sbjct: 79 RTDGKLVDGRELRVTLAKYDR--PSD 102
>gi|395534618|ref|XP_003769337.1| PREDICTED: serine/arginine-rich splicing factor 12 [Sarcophilus
harrisii]
Length = 317
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 80/144 (55%), Gaps = 27/144 (18%)
Query: 3 GRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGR--GR--DLPTSLLVRNLRHDCRPEDI 58
G + TP P P G SP+P+ +Y GGR GR P++ + RPED+
Sbjct: 41 GPASTPPPEPEGLAN------TSPTPQFKYVGGRSPGRRGSRPSNTI--------RPEDL 86
Query: 59 RRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ---------FVEPDDAAEAKRHMDGQVLL 109
RR F ++G I D+Y+P D+Y+ PRGF ++Q F + DA +A +++ + +
Sbjct: 87 RREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFHSLVIFEDVRDAEDALYNLNRKWVC 146
Query: 110 GRELTVVFAEENRKKPSDMRARER 133
GR++ + FA+ +RK P M+++ER
Sbjct: 147 GRQIEIQFAQGDRKTPGQMKSKER 170
>gi|338721847|ref|XP_001504243.3| PREDICTED: serine/arginine-rich splicing factor 10 [Equus caballus]
Length = 153
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 55/77 (71%)
Query: 56 EDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A ++D + + GR++ +
Sbjct: 4 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 63
Query: 116 VFAEENRKKPSDMRARE 132
FA+ +RK P+ M+A+E
Sbjct: 64 QFAQGDRKTPNQMKAKE 80
>gi|301774570|ref|XP_002922705.1| PREDICTED: splicing factor, arginine/serine-rich 13B-like
[Ailuropoda melanoleuca]
Length = 269
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 64/100 (64%), Gaps = 8/100 (8%)
Query: 42 TSLLV-RNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ-----FVEPD- 94
TSL V R R RPED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D
Sbjct: 10 TSLFVSRARRPGDRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDV 69
Query: 95 -DAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
DA +A +++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 70 RDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 109
>gi|358009411|pdb|2LEA|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm
gi|358009412|pdb|2LEB|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uccagu-3'
gi|358009414|pdb|2LEC|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uggagu-3'
Length = 135
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 48 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 107
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 108 AMDGAVLDGRELRVQMA 124
>gi|294933968|ref|XP_002780925.1| FUS-interacting serine-arginine-rich protein, putative [Perkinsus
marinus ATCC 50983]
gi|239891072|gb|EER12720.1| FUS-interacting serine-arginine-rich protein, putative [Perkinsus
marinus ATCC 50983]
Length = 137
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 58 IRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVF 117
+R FE++G I+D+Y+P DYYS PRGFGF++F +P DA EAK MDG+ + G + V
Sbjct: 3 LREAFEKYGEIRDVYIPLDYYSRRPRGFGFVEFSDPRDADEAKAAMDGKRIGGNAIEVEI 62
Query: 118 AEENRKKPSDMR 129
A+E RK P MR
Sbjct: 63 AKERRKSPKTMR 74
>gi|355718912|gb|AES06428.1| splicing factor, arginine/serine-rich 2 [Mustela putorius furo]
Length = 108
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea mays]
Length = 198
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 91/173 (52%), Gaps = 12/173 (6%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DIY+PRD+ +G+PRGF F+++ D+A +A
Sbjct: 17 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDG 76
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPR---YSRSPPPRYARS- 158
+DG GR L V FA + P+ A + RGR +P PR SRSP RY
Sbjct: 77 LDGMRFDGRALMVQFA---KYGPN---AEKIHRGRITEENPKPRGRCRSRSPRQRYREDY 130
Query: 159 -PSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRG 210
R S R Y ++ G ++ R R++S SP YD R R R+PH G
Sbjct: 131 WDRDYRRRSQSRSRERYEQAGYRDG-DHRRHRTHSISPDYDRKRNRHRAPHEG 182
>gi|355566974|gb|EHH23353.1| hypothetical protein EGK_06805 [Macaca mulatta]
Length = 287
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+PR++++ PRGF F++F + DA +
Sbjct: 11 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHDRRDAQD 70
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
A+ MDG L GREL V A R+ P R RE
Sbjct: 71 AEAAMDGAELDGRELRVQVARYGRRDPPRSRQRE 104
>gi|297741200|emb|CBI32151.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 68/105 (64%), Gaps = 11/105 (10%)
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARER----GRGR---FRRRSPPPRYSRSPPPRY 155
MDGQVLLGRELTVVFAEENRK+P DMRARER GRGR RR P S
Sbjct: 1 MDGQVLLGRELTVVFAEENRKRPVDMRARERTSVVGRGRPSDRRRSPPRYSRSPRYARSR 60
Query: 156 ARSPSYGRDYSPPPRRRNYSRSVSPHGQ-NYSRERSYSRSPAYDG 199
+RSP++ Y P PRRR+YSRSVSP + YS E+ YS SP G
Sbjct: 61 SRSPNH---YPPSPRRRHYSRSVSPQDKRRYSGEQPYSASPPVKG 102
>gi|51094548|gb|EAL23802.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 549
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 99/212 (46%), Gaps = 53/212 (25%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+P + ++ PRGF F++F + DA +
Sbjct: 267 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRSDAQD 326
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKK-PSDMRARERGR---GRFRRRSPPP--------- 145
A+ MDG VL REL V A R+ P + RGR GR+ RRS P
Sbjct: 327 AEAAMDGAVLDERELRVRMARYGRRDLPRSSQEEPRGRSWGGRYGRRSGSPRGRHRSQSR 386
Query: 146 --------------------------RYSRSP-------PPRYARSPSYGRDYSPPPRRR 172
RYSRSP RY RSP Y R YS R
Sbjct: 387 GPSYSRSRSRSHYGGSRYSLSIYRRSRYSRSPYRRSHYRGSRYGRSP-YSRSYS----RH 441
Query: 173 NYSRSVSPHGQNYSRERSYSRSPAYDGPRGRS 204
+YSR SP+ +++ RE Y RSP R RS
Sbjct: 442 HYSR--SPYRESHYRESRYRRSPYIRSSRNRS 471
>gi|348680240|gb|EGZ20056.1| hypothetical protein PHYSODRAFT_354260 [Phytophthora sojae]
Length = 251
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQ-FGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
P SLLVRNL + +++RR F + G I D+Y+P++Y S PRGF FI+F + +
Sbjct: 80 PISLLVRNLSPETTQDELRRAFSRRAGDILDVYIPKEYNSNRPRGFAFIEFADSRVGRDI 139
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMR 129
K MD L RE+ V+FA+++RK P +MR
Sbjct: 140 KFEMDRTQLGDREIAVLFAKQHRKSPQEMR 169
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PE +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDNRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG +L GREL V A
Sbjct: 74 AMDGALLDGRELRVQMA 90
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 219
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D TSL V NL + PED++R FE++G + D+Y+PR Y+ E RGF F++F + D +
Sbjct: 11 DGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCED 70
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A +DG ++ GREL V A
Sbjct: 71 AMDALDGYMMDGRELRVQMA 90
>gi|17532819|ref|NP_495014.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
gi|351060988|emb|CCD68735.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
Length = 126
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL + NL + P D+RR FE++G I D+++PRD YS + +GFGF++F E DA A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSD 127
DG+++ GREL V A+ +R PSD
Sbjct: 79 RTDGKLVDGRELRVTLAKYDR--PSD 102
>gi|51094549|gb|EAL23803.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 293
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 99/212 (46%), Gaps = 53/212 (25%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+P + ++ PRGF F++F + DA +
Sbjct: 11 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRSDAQD 70
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKK-PSDMRARERGR---GRFRRRSPPP--------- 145
A+ MDG VL REL V A R+ P + RGR GR+ RRS P
Sbjct: 71 AEAAMDGAVLDERELRVRMARYGRRDLPRSSQEEPRGRSWGGRYGRRSGSPRGRHRSQSR 130
Query: 146 --------------------------RYSRSP-------PPRYARSPSYGRDYSPPPRRR 172
RYSRSP RY RSP Y R YS R
Sbjct: 131 GPSYSRSRSRSHYGGSRYSLSIYRRSRYSRSPYRRSHYRGSRYGRSP-YSRSYS----RH 185
Query: 173 NYSRSVSPHGQNYSRERSYSRSPAYDGPRGRS 204
+YSR SP+ +++ RE Y RSP R RS
Sbjct: 186 HYSR--SPYRESHYRESRYRRSPYIRSSRNRS 215
>gi|268531152|ref|XP_002630702.1| C. briggsae CBR-RSP-4 protein [Caenorhabditis briggsae]
Length = 195
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL + NL + P D+RR FE++G I D+++PRD YS + +GFGF++F E DA A
Sbjct: 18 TSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 77
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSD 127
DG+++ GREL V A+ +R PSD
Sbjct: 78 RTDGKLVDGRELRVTLAKYDR--PSD 101
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a [Mus
musculus]
Length = 241
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|198415726|ref|XP_002129926.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2
(SC-35) [Ciona intestinalis]
Length = 178
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 34 GGR---GRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQF 90
GGR G D SL V NL + PE ++R FE++G + D+Y+PRD YS E RGF F++F
Sbjct: 4 GGRPPPGLDNMVSLKVDNLTYRTSPETLKRSFEKYGDVGDVYIPRDRYSRESRGFAFVRF 63
Query: 91 VEPDDAAEAKRHMDGQVLLGRELTVVFA 118
+ DA +A MDG+ + GR L V A
Sbjct: 64 YDKRDAEDAMDCMDGKTMDGRVLRVAMA 91
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|443696471|gb|ELT97165.1| hypothetical protein CAPTEDRAFT_18729 [Capitella teleta]
Length = 160
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + ED+RR FE++G + D+Y+PRD +S E RGF F++F + DA +A
Sbjct: 14 ASLKVDNLTYRTTTEDLRRAFEKYGDVGDVYIPRDRFSHESRGFAFVRFFDKRDADDAME 73
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSD 127
MDG V+ GREL V A+ R PSD
Sbjct: 74 SMDGAVMDGRELRVQSAKYGR--PSD 97
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
+ S+ VR + D D+ FE++G + DIY+P+ Y++G PRGF +++F + +DA A
Sbjct: 2 VARSIYVRGVPPDASSSDLMEHFEEYGKVNDIYIPKSYHNGRPRGFAYVKFDKQEDAELA 61
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFR 139
+ V+LG+ L V +A RK +DMR + GR+R
Sbjct: 62 MEKIPSIVILGQTLNVEWATGERKTSNDMRRADDRSGRYR 101
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|241779177|ref|XP_002399858.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215508537|gb|EEC17991.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 209
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQF-VEPD---DAA 97
+SL +RN+ RPED+R F ++G I D+Y+P DYY+ PRGF ++Q+ + D DA
Sbjct: 11 SSLFIRNVPDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQYPLFLDHLRDAE 70
Query: 98 EAKRHMDGQVLLGRELTVVFAEENRKKPSDM 128
+A +D GREL + FA+ +RK PS+M
Sbjct: 71 DAMYSLDRTRFYGRELEIEFAQGDRKTPSEM 101
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G + DIY+PRD ++ E RGF F++F + DA +A
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG++L GREL V A
Sbjct: 74 AMDGRLLDGRELRVQMA 90
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G + DIY+PRD ++ E RGF F++F + DA +A
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG++L GREL V A
Sbjct: 74 AMDGRLLDGRELRVQMA 90
>gi|397468421|ref|XP_003805885.1| PREDICTED: uncharacterized protein LOC100969202 [Pan paniscus]
Length = 293
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+PR+ ++ PR F F++F + DA +
Sbjct: 11 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRSFAFVRFHDRSDAQD 70
Query: 99 AKRHMDGQVLLGRELTVVFAEENRK 123
A+ MDG VL GREL V A R+
Sbjct: 71 AEAAMDGAVLDGRELRVQMARYGRR 95
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 221
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G + DIY+PRD ++ E RGF F++F + DA +A
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG++L GREL V A
Sbjct: 74 AMDGRLLDGRELRVQMA 90
>gi|326427558|gb|EGD73128.1| hypothetical protein PTSG_04841 [Salpingoeca sp. ATCC 50818]
Length = 285
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L V NL +D + D+ F +FG +KD++LP +G RGFGF+ F + +A +A++ M
Sbjct: 82 LFVGNLNYDTKVSDMEEAFGKFGKVKDVFLPMHRVTGTCRGFGFVTFADRTEAEDAEKGM 141
Query: 104 DGQVLLGRELTVVFA 118
+G LGRE+ V FA
Sbjct: 142 NGTTFLGREVAVNFA 156
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 206
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA +A
Sbjct: 17 ISLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALE 76
Query: 102 HMDGQVLLGRELTVVFA 118
MDG+ L GREL V A
Sbjct: 77 AMDGRKLDGRELRVQMA 93
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Monodelphis
domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Papio
anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Papio
anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Papio
anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4 [Papio
anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName: Full=Splicing
component, 35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|428179023|gb|EKX47896.1| hypothetical protein GUITHDRAFT_106442 [Guillardia theta CCMP2712]
Length = 563
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 32 YGGGRGRDLP----TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGF 87
YG GR D P + + D R +++ + F +FG I D+Y+PR YY G PRGF F
Sbjct: 297 YGRGRAVDQPPYERDAYWWKRYLLDRRVDELEQVFNRFGRILDVYIPRSYYKGIPRGFAF 356
Query: 88 IQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
++F D A R DG L GR L++ +A+ NRK +MR R R
Sbjct: 357 VEFENYLDCKAALRSYDGTRLDGRVLSICYAQMNRKSSGEMRRRNR 402
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|149478364|ref|XP_001514814.1| PREDICTED: serine/arginine-rich splicing factor 2-like, partial
[Ornithorhynchus anatinus]
Length = 120
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|1405747|emb|CAA67134.1| PR264/SC35 [Mus musculus]
Length = 121
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|240849499|ref|NP_001155685.1| serine/arginine rich splicing factor-like [Acyrthosiphon pisum]
gi|239790824|dbj|BAH71947.1| ACYPI006902 [Acyrthosiphon pisum]
Length = 153
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G + DIY+PRD ++ E RGF F++F + DA +A
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG++L GREL V A
Sbjct: 74 AMDGRMLDGRELRVQMA 90
>gi|410959688|ref|XP_003986434.1| PREDICTED: serine/arginine-rich splicing factor 12 [Felis catus]
Length = 285
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 62/97 (63%), Gaps = 10/97 (10%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ-----FVEPD--DA 96
LL NL +PED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D DA
Sbjct: 32 LLNHNLY---KPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDA 88
Query: 97 AEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
+A +++ + + GR++ + FA+ +RK P M+++ER
Sbjct: 89 EDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 125
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 2 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 61
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 62 AMDGAVLDGRELRVQMA 78
>gi|73973899|ref|XP_532229.2| PREDICTED: serine/arginine-rich splicing factor 12 [Canis lupus
familiaris]
Length = 326
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 72/122 (59%), Gaps = 13/122 (10%)
Query: 25 SPSPRGRYGGGRG--RDLPTSLLVRNL---RHDCRPEDIRRPFEQFGAIKDIYLPRDYYS 79
SP+P G GG G RD+ + NL + RPED+RR F ++G I D+Y+P D+Y+
Sbjct: 45 SPAPEGPTDGGIGASRDVSVPPGLLNLLPAQPFFRPEDLRREFGRYGPIVDVYIPLDFYT 104
Query: 80 GEPRGFGFIQ--------FVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRAR 131
PRGF ++Q F + DA +A +++ + + GR++ + FA+ +RK P M+++
Sbjct: 105 RRPRGFAYVQYPLFSLVIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSK 164
Query: 132 ER 133
ER
Sbjct: 165 ER 166
>gi|303324701|pdb|2KN4|A Chain A, The Structure Of The Rrm Domain Of Sc35
Length = 158
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 71 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 130
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 131 AMDGAVLDGRELRVQMA 147
>gi|341895771|gb|EGT51706.1| hypothetical protein CAEBREN_26166 [Caenorhabditis brenneri]
gi|341900371|gb|EGT56306.1| hypothetical protein CAEBREN_17888 [Caenorhabditis brenneri]
Length = 200
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL + NL + P D+RR FE++G I D+++PRD YS + +GFGF++F E DA A
Sbjct: 18 TSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAMD 77
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSD 127
DG+ + GREL V A+ +R PSD
Sbjct: 78 RTDGKNVDGRELRVTLAKYDR--PSD 101
>gi|351699563|gb|EHB02482.1| 35 kDa SR repressor protein, partial [Heterocephalus glaber]
Length = 246
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ----FVEPD--DAAEAKRHMDGQV 107
RPED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D DA +A +++ +
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFFIFEDVRDAEDALYNLNRKW 60
Query: 108 LLGRELTVVFAEENRKKPSDMRARER 133
+ GR++ + FA+ +RK P M+++ER
Sbjct: 61 VCGRQIEIQFAQGDRKTPGQMKSKER 86
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D TSL V NL + PED++R FE++G + D+Y+PR Y+ E RGF F++F + D +
Sbjct: 11 DGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCED 70
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A +DG ++ GREL V A
Sbjct: 71 AMDALDGYMMDGRELRVQMA 90
>gi|393910359|gb|EJD75841.1| hypothetical protein LOAG_17093 [Loa loa]
Length = 203
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SL + N+ + P+D+RR FE++G I DI++PRD Y+ + +GFGF++F DA A
Sbjct: 15 SLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSRRDAEYAMDR 74
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARE 132
MDG+ + GRE+ V A R P D R+R
Sbjct: 75 MDGRWVDGREIRVAMARYER--PIDERSRN 102
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SL V NL + PE +RR FE++G + D+Y+PRD YS E RGF F++F + DA +A
Sbjct: 1 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMDA 60
Query: 103 MDGQVLLGRELTVVFA 118
MDG +L GREL V A
Sbjct: 61 MDGALLDGRELRVQMA 76
>gi|281344246|gb|EFB19830.1| hypothetical protein PANDA_011704 [Ailuropoda melanoleuca]
Length = 241
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPD-DAAEAKRHMDGQVLLGRE 112
RPED+RR F ++G I D+Y+P D+Y+ PRGF ++ E DA +A +++ + + GR+
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQ 60
Query: 113 LTVVFAEENRKKPSDMRARER 133
+ + FA+ +RK P M+++ER
Sbjct: 61 IEIQFAQGDRKTPGQMKSKER 81
>gi|449662790|ref|XP_004205613.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Hydra
magnipapillata]
Length = 73
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFV 91
GGR PTS+ VRN+ HD RPED+RR FE++G I D+Y+P DYY+ E RGF +IQ++
Sbjct: 5 GGRT---PTSVFVRNVHHDVRPEDLRRVFEKYGDISDVYVPLDYYTRESRGFAYIQYL 59
>gi|348019723|gb|AEP43803.1| SR-protein [Biston betularia]
Length = 152
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA EA
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDRRDAEEALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
+DG++L GREL V A
Sbjct: 74 SLDGRMLDGRELRVQMA 90
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + P+D+RR FE+ G + DIY+PRD ++ E RGF F++F + DA +
Sbjct: 12 DGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAED 71
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A MDG++L GREL V A
Sbjct: 72 ALDAMDGRMLDGRELRVQMA 91
>gi|357608819|gb|EHJ66166.1| putative serine/arginine rich splicing factor [Danaus plexippus]
Length = 165
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + P+D+RR FE+ G + DIY+PRD Y+ E RGF F++F E DA EA
Sbjct: 14 VSLKVDNLTYRTTPDDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
+DG++L GREL V A
Sbjct: 74 SLDGRMLDGRELRVQMA 90
>gi|308493715|ref|XP_003109047.1| CRE-RSP-4 protein [Caenorhabditis remanei]
gi|308247604|gb|EFO91556.1| CRE-RSP-4 protein [Caenorhabditis remanei]
Length = 199
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
Query: 33 GGGRGRDLP-----TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGF 87
GGG R P TSL + NL + P D+RR F+++G I D+++PRD YS + +GFGF
Sbjct: 4 GGGDRRAAPDINGLTSLKIDNLSYQTTPNDLRRVFDRYGDIGDVHIPRDKYSRQSKGFGF 63
Query: 88 IQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSD 127
++F E DA A DG+++ GREL V A+ +R PSD
Sbjct: 64 VRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDR--PSD 101
>gi|118790804|ref|XP_318826.3| AGAP009742-PA [Anopheles gambiae str. PEST]
gi|116118108|gb|EAA14228.3| AGAP009742-PA [Anopheles gambiae str. PEST]
Length = 174
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + P+D+RR FE+ G + DIY+PRD ++ E RGF F++F + DA +A
Sbjct: 22 ISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAEDALD 81
Query: 102 HMDGQVLLGRELTVVFA 118
MDG++L GREL V A
Sbjct: 82 AMDGRMLDGRELRVQMA 98
>gi|261335957|emb|CBH09290.1| putative Sr protein [Heliconius melpomene]
Length = 165
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA EA
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRRDAEEALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
+DG++L GREL V A
Sbjct: 74 SLDGRMLDGRELRVQMA 90
>gi|443429415|gb|AGC92700.1| serine/arginine-rich splicing factor 2-like protein [Heliconius
erato]
Length = 168
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA EA
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRRDAEEALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
+DG++L GREL V A
Sbjct: 74 SLDGRMLDGRELRVQMA 90
>gi|431838154|gb|ELK00086.1| 35 kDa SR repressor protein, partial [Pteropus alecto]
Length = 241
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPD-DAAEAKRHMDGQVLLGRE 112
RPED+RR F ++G I D+Y+P D+Y+ PRGF ++ E DA +A +++ + + GR+
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQ 60
Query: 113 LTVVFAEENRKKPSDMRARER 133
+ + FA+ +RK P M+++ER
Sbjct: 61 IEIQFAQGDRKTPGQMKSKER 81
>gi|348563359|ref|XP_003467475.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Cavia
porcellus]
Length = 422
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ----FVEPD--DAAEAKRHMDGQV 107
RPED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D DA +A +++ +
Sbjct: 177 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFFIFEDVRDAEDALYNLNRKW 236
Query: 108 LLGRELTVVFAEENRKKPSDMRARER 133
+ GR++ + FA+ +RK P M+++ER
Sbjct: 237 VCGRQIEIQFAQGDRKTPGQMKSKER 262
>gi|440911383|gb|ELR61059.1| Serine/arginine-rich splicing factor 12, partial [Bos grunniens
mutus]
Length = 241
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPD-DAAEAKRHMDGQVLLGRE 112
RPED+RR F ++G I D+Y+P D+Y+ PRGF ++ E DA +A +++ + + GR+
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQ 60
Query: 113 LTVVFAEENRKKPSDMRARER 133
+ + FA+ +RK P M+++ER
Sbjct: 61 IEIQFAQGDRKTPGQMKSKER 81
>gi|332373880|gb|AEE62081.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + P+D+RR FE+ G + DIY+PRD ++ E RGF F++F + DA +A
Sbjct: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG++L GREL V A
Sbjct: 74 AMDGRMLDGRELRVQMA 90
>gi|355561899|gb|EHH18531.1| hypothetical protein EGK_15157, partial [Macaca mulatta]
gi|355757706|gb|EHH61231.1| hypothetical protein EGM_19190, partial [Macaca fascicularis]
Length = 241
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPD-DAAEAKRHMDGQVLLGRE 112
RPED+RR F ++G I D+Y+P D+Y+ PRGF ++ E DA +A +++ + + GR+
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQ 60
Query: 113 LTVVFAEENRKKPSDMRARER 133
+ + FA+ +RK P M+++ER
Sbjct: 61 IEIQFAQGDRKTPGQMKSKER 81
>gi|291396606|ref|XP_002714518.1| PREDICTED: serine-arginine repressor protein-like [Oryctolagus
cuniculus]
Length = 248
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ-----FVEPD--DAAEAKRHMDGQ 106
+PED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D DA +A +++ +
Sbjct: 2 KPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 61
Query: 107 VLLGRELTVVFAEENRKKPSDMRARER 133
+ GR++ + FA+ +RK P M+++ER
Sbjct: 62 WVCGRQIEIQFAQGDRKTPGQMKSKER 88
>gi|395849978|ref|XP_003797581.1| PREDICTED: serine/arginine-rich splicing factor 12 [Otolemur
garnettii]
Length = 366
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 8/88 (9%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ--------FVEPDDAAEAKRHMDG 105
RPED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F + DA +A +++
Sbjct: 119 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFTLVIFEDVRDAEDALYNLNR 178
Query: 106 QVLLGRELTVVFAEENRKKPSDMRARER 133
+ + GR++ + FA+ +RK P M+++ER
Sbjct: 179 KWVCGRQIEIQFAQGDRKTPGQMKSKER 206
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 38 RDLP-TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDA 96
RDLP S+LVRNL D R +D+R F +G I D+Y+P+D +G PRG F+++
Sbjct: 39 RDLPGVSVLVRNLSWDAREDDVRDRFAGYGNILDVYMPKDRETGRPRGLAFVKYATQ--- 95
Query: 97 AEAKRHMDGQV--LLGRELTVVFAEENRKKPSDMRA 130
+EA +DG V LGRE+ A + RK +MR+
Sbjct: 96 SEADAAVDGGVGDFLGREIRCEIATQQRKSRDEMRS 131
>gi|340372565|ref|XP_003384814.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Amphimedon
queenslandica]
Length = 169
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL P++I+ FE++G + DIY+PRD Y+ E RGF F++F E DA +A
Sbjct: 2 VSLKVDNLSFRMTPDEIKPIFEKYGEVGDIYIPRDPYTKESRGFAFVRFYEKRDAEDAME 61
Query: 102 HMDGQVLLGRELTVVFA 118
+DG V+ GRE+ V A
Sbjct: 62 RLDGYVIDGREMRVQLA 78
>gi|193784791|dbj|BAG53944.1| unnamed protein product [Homo sapiens]
Length = 195
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL REL V A
Sbjct: 74 AMDGAVLDARELRVQMA 90
>gi|414867727|tpg|DAA46284.1| TPA: hypothetical protein ZEAMMB73_663605 [Zea mays]
Length = 494
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%), Gaps = 7/71 (9%)
Query: 28 PRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGF 87
P G++G + LP + RP+D+RRPF +FG +KDIYLP+DYY+ EPRGFGF
Sbjct: 338 PFGKFGPVKDIYLPKD-------YYTRPDDLRRPFGKFGPVKDIYLPKDYYTREPRGFGF 390
Query: 88 IQFVEPDDAAE 98
IQ+ +P+DA++
Sbjct: 391 IQYFDPEDASD 401
>gi|115843186|ref|XP_001198082.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PED+RR FE++G + DIY+PRD +S E RGF F+++ + DA +A
Sbjct: 14 TSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG + GR+L V A
Sbjct: 74 SMDGNLYDGRKLRVQMA 90
>gi|241020201|ref|XP_002405861.1| IFN-response element binding factor, putative [Ixodes scapularis]
gi|215491811|gb|EEC01452.1| IFN-response element binding factor, putative [Ixodes scapularis]
Length = 194
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D TSL V NL + PED++R FE++G + D+Y+PR Y+ + RGF F++F + D +
Sbjct: 11 DGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRDSRGFAFVRFYDKRDGED 70
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A +DG +L GREL V A
Sbjct: 71 AMDALDGYILDGRELRVQMA 90
>gi|115843189|ref|XP_001198099.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + PED+RR FE++G + DIY+PRD +S E RGF F+++ + DA +A
Sbjct: 14 TSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG + GR+L V A
Sbjct: 74 SMDGNLYDGRKLRVQMA 90
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + P+D+RR FE+ G + DIY+PRD ++ E RGF F++F + DA +A
Sbjct: 15 ISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAQDALD 74
Query: 102 HMDGQVLLGRELTVVFA 118
MDG++L GREL V A
Sbjct: 75 AMDGRMLDGRELRVQMA 91
>gi|440895154|gb|ELR47416.1| Serine/arginine-rich splicing factor 2, partial [Bos grunniens
mutus]
Length = 86
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGREL 113
MDG VL GREL
Sbjct: 74 AMDGAVLDGREL 85
>gi|403261884|ref|XP_003923335.1| PREDICTED: serine/arginine-rich splicing factor 12 [Saimiri
boliviensis boliviensis]
Length = 271
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ-----FVEPD--DAAEAKRHMDGQ 106
+PED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D DA +A +++ +
Sbjct: 25 QPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 84
Query: 107 VLLGRELTVVFAEENRKKPSDMRARER 133
+ GR++ + FA+ +RK P M+++ER
Sbjct: 85 WVCGRQIEIQFAQGDRKTPGQMKSKER 111
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + P+D+RR FE+ G + DIY+PRD ++ E RGF F++F + DA +A
Sbjct: 15 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAQDALD 74
Query: 102 HMDGQVLLGRELTVVFA 118
MDG++L GREL V A
Sbjct: 75 AMDGRMLDGRELRVQMA 91
>gi|397504738|ref|XP_003822938.1| PREDICTED: serine/arginine-rich splicing factor 12 [Pan paniscus]
gi|426353976|ref|XP_004044448.1| PREDICTED: serine/arginine-rich splicing factor 12 [Gorilla gorilla
gorilla]
Length = 257
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ-----FVEPD--DAAEAKRHMDGQ 106
+PED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D DA +A +++ +
Sbjct: 11 QPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 70
Query: 107 VLLGRELTVVFAEENRKKPSDMRARER 133
+ GR++ + FA+ +RK P M+++ER
Sbjct: 71 WVCGRQIEIQFAQGDRKTPGQMKSKER 97
>gi|426356205|ref|XP_004045477.1| PREDICTED: uncharacterized protein LOC101137976 [Gorilla gorilla
gorilla]
Length = 496
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++ + D+Y+PR+ ++ PRGF F++F + DA +
Sbjct: 205 DGMITLKVDNLTYRTSPDSLRRVFEKYWPVGDVYIPREPHTKAPRGFAFVRFHDRSDAQD 264
Query: 99 AKRHMDGQVLLGRELTVVFAEENRK 123
A+ MDG VL GREL V A R+
Sbjct: 265 AEAAMDGAVLDGRELRVRMARYGRR 289
>gi|448878429|gb|AGE46177.1| arginine/serine-rich splicing factor SCL42 transcript II
[Physcomitrella patens subsp. patens]
Length = 106
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDL-PTSLLVRNLRHDCRPEDIR 59
MRGRS PPR S GG G R RSPSPRG GG P+SLLVRN+ DC ED+R
Sbjct: 1 MRGRSPLGHSPPRRSHGG-GNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRDCSAEDLR 59
Query: 60 RPFEQFGAIKDIYLPRDYYSG 80
PFE++G +KD+YLPRDYY+G
Sbjct: 60 IPFERYGVVKDVYLPRDYYTG 80
>gi|332218114|ref|XP_003258205.1| PREDICTED: serine/arginine-rich splicing factor 12 [Nomascus
leucogenys]
Length = 249
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ-----FVEPD--DAAEAKRHMDGQ 106
+PED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D DA +A +++ +
Sbjct: 3 QPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 62
Query: 107 VLLGRELTVVFAEENRKKPSDMRARER 133
+ GR++ + FA+ +RK P M+++ER
Sbjct: 63 WVCGRQIEIQFAQGDRKTPGQMKSKER 89
>gi|145346140|ref|XP_001417551.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577778|gb|ABO95844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 92
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFV---EPDDAAE 98
S+LVRN+ D +DIR F+ +G + D+Y+P+D +G RG F+++ E DDA E
Sbjct: 1 VSVLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRETGRKRGLAFVKYAIQGEADDAVE 60
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRAR 131
MD ++GRE+ A E RK P +MR R
Sbjct: 61 KATGMD---IMGREVRCEIANERRKNPDEMRGR 90
>gi|124804262|ref|XP_001347950.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496204|gb|AAN35863.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 914
Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 8/139 (5%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D S+L+RNL +D P+ +R+ FE G +KD+YLP D+Y+ +PRGFGF+++ E A E
Sbjct: 3 DSGCSILIRNLNYDTSPDKVRKIFENVGKVKDVYLPLDHYTRKPRGFGFVEYFESKYAKE 62
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARS 158
A ++ + G E+ ++ A+ RK P M +F Y +Y
Sbjct: 63 AINILNHSRIDGNEIRIIIAQNRRKSPDTM--------KFYHNEYLYNYRHKDNRKYNNC 114
Query: 159 PSYGRDYSPPPRRRNYSRS 177
+Y R YS R RS
Sbjct: 115 KNYKRKYSKYYRTDERDRS 133
>gi|413955619|gb|AFW88268.1| hypothetical protein ZEAMMB73_484317 [Zea mays]
Length = 117
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 74/118 (62%), Gaps = 20/118 (16%)
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARE----RGR---GRFRRRSPPPRYSRSPPPRY 155
MDG++LLGRE+ VVFAEENRKKPSDMRARE RGR GR R RSP S
Sbjct: 1 MDGKMLLGREIAVVFAEENRKKPSDMRAREKISGRGRSYDGRLRSRSPGLNGSPR----- 55
Query: 156 ARSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRGR----SRSPHR 209
RS S R YSP P+R++YSRS +P RERS SRSPA + R SRSPHR
Sbjct: 56 GRSRSQSRSYSPAPKRKHYSRSPAPR----PRERSLSRSPAVNRSRSASPIVSRSPHR 109
>gi|313229099|emb|CBY18251.1| unnamed protein product [Oikopleura dioica]
Length = 385
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VR + + + ++R F+ FG ++D+YLP+DYY+ E +G ++++ E +DA EA+ M
Sbjct: 126 LFVRPIDNGTKVSEVRDYFQVFGELRDVYLPKDYYTKEMKGVAYVEYKEQEDAEEAQAAM 185
Query: 104 DGQVLLGRELTVVFAEENRKKPSDM 128
DG G+ ++V FA+ +RK M
Sbjct: 186 DGCEFNGKNISVTFAQGDRKSKDTM 210
>gi|313225812|emb|CBY07286.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SL VR + + RP++++ F +FGA+KD+++P D+ + PRGF +I+F +DA
Sbjct: 5 SLFVRPIAQNVRPDELKAEFNKFGAVKDVHIPLDFRTRAPRGFAYIEFETMEDARNG-LG 63
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRA 130
MDG L GR++ V FAE +RK P M++
Sbjct: 64 MDGMNLNGRKVNVAFAEGDRKTPGAMKS 91
>gi|313219579|emb|CBY30501.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SL VR + + RP++++ F +FGA+KD+++P D+ + PRGF +I+F +DA
Sbjct: 5 SLFVRPIAQNVRPDELKAEFNKFGAVKDVHIPLDFRTRAPRGFAYIEFETMEDARNG-LG 63
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRA 130
MDG L GR++ V FAE +RK P M++
Sbjct: 64 MDGMNLNGRKVNVAFAEGDRKTPGAMKS 91
>gi|448878344|gb|AGE46135.1| arginine/serine-rich splicing factor SCL25A transcript III
[Sorghum bicolor]
Length = 78
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS 79
DLPTSLLVRNLR DCRP+D+RRPF +FG +KDIYLP+DYY+
Sbjct: 34 DLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPKDYYT 74
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L V NL + PED++R FE++G + D+Y+PR Y+ E RGF F++F + D +A +
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 60
Query: 104 DGQVLLGRELTVVFA 118
DG ++ GREL V A
Sbjct: 61 DGYMMDGRELRVQMA 75
>gi|242005811|ref|XP_002423754.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
gi|212506956|gb|EEB11016.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
Length = 246
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL P+D+RR FE+ G + DIY+PRD +S E RGF F++F + DA +A
Sbjct: 61 VSLKVDNLTFRTTPDDLRRVFERCGEVGDIYIPRDRFSRESRGFAFVRFYDKRDAEDALD 120
Query: 102 HMDGQVLLGRELTVVFA 118
MDG++L GREL V A
Sbjct: 121 AMDGRILDGRELRVQMA 137
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQF 90
TSL V N+ + R D+ F +FG + D+Y+PRD +S RGF F+ +
Sbjct: 2 TSLKVGNISYRTRTLDLHHIFGKFGDVGDVYIPRDKHSKHSRGFAFVSY 50
>gi|448878433|gb|AGE46179.1| arginine/serine-rich splicing factor SCL42 transcript IV
[Physcomitrella patens subsp. patens]
Length = 103
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDL-PTSLLVRNLRHDCRPEDIR 59
MRGRS PPR S GG G R RSPSPRG GG P+SLLVRN+ DC ED+R
Sbjct: 1 MRGRSPLGHSPPRRSHGG-GNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRDCSAEDLR 59
Query: 60 RPFEQFGAIKDIYLPRDYYSG 80
PFE++G +KD+YLPRDYY+G
Sbjct: 60 IPFERYGVVKDVYLPRDYYTG 80
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + DIY+PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+V+ GRE+ V FA+
Sbjct: 77 LDGRVVDGREIMVQFAK 93
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + DIY+PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+V+ GRE+ V FA+
Sbjct: 77 LDGRVVDGREIMVQFAK 93
>gi|221117570|ref|XP_002161458.1| PREDICTED: uncharacterized protein LOC100200042 isoform 2 [Hydra
magnipapillata]
Length = 195
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + ED+ R F+++G + DIY+PRD + E RGF F+++ E DA +A
Sbjct: 18 VSLKVDNLTYRTSMEDLERYFKKYGELGDIYIPRDRNTHESRGFAFVRYYEERDAEDAMD 77
Query: 102 HMDGQVLLGRELTVVFA 118
MDG+V+ GRE+ V A
Sbjct: 78 SMDGKVIDGREIRVAMA 94
>gi|337926|gb|AAA60306.1| splicing factor [Homo sapiens]
Length = 221
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++ + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|444520122|gb|ELV12918.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 361
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 19/138 (13%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + P+ +RR FE++G I D+Y+PRD ++ RGF F++F + A +A
Sbjct: 4 ISLKVDNLTYRTSPDTLRRVFEKYGRIGDVYIPRDRFTKASRGFAFVRFYCKNHAEDALD 63
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPP--RYARSP 159
+DG VL GR+L V A + P D+ GR R ++PPP ++ +
Sbjct: 64 AVDGVVLDGRKLRVQMAYHD--GPPDL---HYGR----------RCGKTPPPEGKWEKDD 108
Query: 160 SYGRDYSPPPRRRNYSRS 177
YGR S PRR+ +SR+
Sbjct: 109 DYGRSRS--PRRQRFSRA 124
>gi|345486316|ref|XP_003425445.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Nasonia
vitripennis]
Length = 198
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G + DIY+PRD ++ E RGF F++F + DA +A
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG+++ GREL V A
Sbjct: 74 AMDGRMVDGRELRVQMA 90
>gi|338710589|ref|XP_001915964.2| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Equus caballus]
Length = 284
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 9/88 (10%)
Query: 55 PEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ---------FVEPDDAAEAKRHMDG 105
PED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F + DA +A +++
Sbjct: 37 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLSYRLVIFEDVRDAEDALYNLNR 96
Query: 106 QVLLGRELTVVFAEENRKKPSDMRARER 133
+ + GR++ + FA+ +RK P M+++ER
Sbjct: 97 KWVCGRQIEIQFAQGDRKTPGQMKSKER 124
>gi|448878431|gb|AGE46178.1| arginine/serine-rich splicing factor SCL42 transcript III
[Physcomitrella patens subsp. patens]
Length = 80
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 1 MRGRSYTPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDL-PTSLLVRNLRHDCRPEDIR 59
MRGRS PPR S GG G R RSPSPRG GG P+SLLVRN+ DC ED+R
Sbjct: 1 MRGRSPLGHSPPRRSHGG-GNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRDCSAEDLR 59
Query: 60 RPFEQFGAIKDIYLPRDYYSG 80
PFE++G +KD+YLPRDYY+G
Sbjct: 60 IPFERYGVVKDVYLPRDYYTG 80
>gi|307106096|gb|EFN54343.1| hypothetical protein CHLNCDRAFT_135593 [Chlorella variabilis]
Length = 224
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 38 RDLPT--SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDD 95
RD PT SLLVRNL D +D+R E++G +KD+Y+P+DYY+G PRG F++F + D
Sbjct: 5 RDPPTGCSLLVRNLAPDVSGDDLRYAAEKYGRVKDVYVPKDYYTGRPRGIAFVEFDDRRD 64
Query: 96 AAEAKRHMDGQVLLGRELTVVFA 118
A +AK MD +L E+ V FA
Sbjct: 65 AEDAKYGMDRSMLGSGEIAVQFA 87
>gi|351709838|gb|EHB12757.1| FUS-interacting serine-arginine-rich protein 1, partial
[Heterocephalus glaber]
Length = 262
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 41 PTSLLVRN-LRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
P + VR + D R ED RR F G D+Y+P D+Y PRGF ++QF + DA +
Sbjct: 8 PQHVSVRQAVADDTRSEDSRREFGSCGPTVDVYVPLDFYIRRPRGFAYVQFEDVCDAEDV 67
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARER 133
++D + + G + + FA+ +RK P+ M+ +ER
Sbjct: 68 LHNLDRKWICGHQTEIQFAQGDRKTPNQMKPKER 101
>gi|431908736|gb|ELK12328.1| Splicing factor, arginine/serine-rich 2 [Pteropus alecto]
Length = 178
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGREL 113
MDG VL GREL
Sbjct: 74 AMDGAVLDGREL 85
>gi|426235141|ref|XP_004011549.1| PREDICTED: serine/arginine-rich splicing factor 12 [Ovis aries]
Length = 301
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 56 EDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ---FVEPD--DAAEAKRHMDGQVLLG 110
ED+RR F ++G I D+Y+P D+Y+ PRGF ++Q F+ D DA +A +++ + + G
Sbjct: 59 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFIFEDVRDAEDALYNLNRKWVCG 118
Query: 111 RELTVVFAEENRKKPSDMRARER 133
R++ + FA+ +RK P M+++ER
Sbjct: 119 RQIEIQFAQGDRKTPGQMKSKER 141
>gi|321458047|gb|EFX69122.1| hypothetical protein DAPPUDRAFT_62581 [Daphnia pulex]
Length = 109
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + ED+RR FE++G + D+Y+P+D +S E RGF F++F + D +A
Sbjct: 13 TSLKVDNLTYRTTCEDLRRVFEKYGDVGDVYIPKDRFSRESRGFAFVRFYDRRDGEDAMH 72
Query: 102 HMDGQVLLGRELTVVFA 118
MDG+++ GREL V A
Sbjct: 73 AMDGRMMDGRELRVQLA 89
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DIY+PRD+ +G+PRGF F+++ D+A +A
Sbjct: 17 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDG 76
Query: 103 MDGQVLLGRELTVVFAEE--NRKKPSDMRARERG---RGRFRRRSPPPRY 147
+DG GR L V FA+ N +K R E RGR R RSP RY
Sbjct: 77 LDGMRFDGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSRSPRQRY 126
>gi|307169015|gb|EFN61874.1| Splicing factor, arginine/serine-rich 2 [Camponotus floridanus]
Length = 208
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G + DIY+PRD ++ E RGF F++F + DA +A
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG++L GREL V A
Sbjct: 74 AMDGRLLDGRELRVQMA 90
>gi|395743396|ref|XP_002822424.2| PREDICTED: uncharacterized protein LOC100448817 [Pongo abelii]
Length = 292
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + + +RR FE++G + D+Y+PR+ ++ PRGF F++F DA +
Sbjct: 11 DGMITLKVDNLTYRTSHDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHHRSDAQD 70
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKK-PSDMRARERGRGRFRRRSPPPRYSRSPPPRYAR 157
A+ MD +L GREL V A R+ P + RGR R R R +R
Sbjct: 71 AEAAMDRAMLDGRELRVQMALYGRRDLPRSSQEEPRGRSWGGRYGRRSRSPRGRHRSQSR 130
Query: 158 SPSY----------GRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSP 195
PSY G YSP P R Y R SP+ +++ R Y RSP
Sbjct: 131 GPSYSGSRSRSHYGGSHYSPSPCRSRYCR--SPYRRSHYRGSRYGRSP 176
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V N+ C PE++R FE G + D+Y+PRD +GEPRGF F+++++ DA A
Sbjct: 2 VTLKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADYAVD 61
Query: 102 HMDGQVLLGRELTVVFAEENR 122
+DG GREL + +A + R
Sbjct: 62 RLDGTRFNGRELRIQYARKRR 82
>gi|170579742|ref|XP_001894964.1| ADP-ribose pyrophosphatase, mitochondrial precursor [Brugia malayi]
gi|158598261|gb|EDP36190.1| ADP-ribose pyrophosphatase, mitochondrial precursor, putative
[Brugia malayi]
Length = 401
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SL + N+ + P+D+RR FE++G I DI++PRD Y+ + +GFGF++F DA A
Sbjct: 291 SLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSRRDAEYAMDR 350
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFR 139
MDG+ + GRE+ V A R P D R+R G +R
Sbjct: 351 MDGRWVDGREIRVAMARYER--PIDERSRNGGSSGYR 385
>gi|237833159|ref|XP_002365877.1| hypothetical protein TGME49_072440 [Toxoplasma gondii ME49]
gi|211963541|gb|EEA98736.1| hypothetical protein TGME49_072440 [Toxoplasma gondii ME49]
Length = 170
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 56 EDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
+++R FE+FG I+D+YLP DY++GEPRGFGF++F DA +A + +L G + V
Sbjct: 6 QEVRAAFEEFGPIRDVYLPLDYHTGEPRGFGFVEFESSKDAYDAMHQLHNTLLNGSTIHV 65
Query: 116 VFAEENRKKPSDM 128
A++ R P M
Sbjct: 66 TIAKKGRSDPMQM 78
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
+ + NL +C +DIR+ F++FG I +I+LP D + + +GFGF+ FV P DA +A M
Sbjct: 188 IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEM 247
Query: 104 DGQVLLGRELTVVFA 118
D + + GR + V +A
Sbjct: 248 DNKFIKGRIVHVTYA 262
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYL--PRDYYSGEPRGFGFIQFVEPDDAAEAK 100
+L V+N+ + + IR+ FE+ G + + L +D + GFGF+++ + +DA A
Sbjct: 517 TLYVKNISFKTKEDVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFVEYAKHEDAINAI 576
Query: 101 RHMDGQVLLGRELTV 115
+ + G+V+ G + +
Sbjct: 577 KTLQGKVIDGHAVQI 591
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
+ LLV+N+ + +++R F +G ++ + LP+ G+ +GF F+++ +AA A
Sbjct: 614 VSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKV-DGQNKGFAFVEYATKQEAANA 672
Query: 100 KRHMDGQVLLGRELTVVFAEE 120
+ GR L + +A++
Sbjct: 673 MAALKNSHFYGRHLIIEYAKD 693
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
++++NL + +++ FE+FG I D + R G R FGFI F D A A M
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGNSRKFGFIGFENEDQAQTAITKM 62
Query: 104 DGQVLLGRELTVVFA 118
+G + +L V A
Sbjct: 63 NGAYIQSSKLQVSLA 77
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
+ + NL +C +DIR+ F++FG I +I+LP D + + +GFGF+ FV P DA +A M
Sbjct: 189 IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEM 248
Query: 104 DGQVLLGRELTVVFA 118
D + + GR + V +A
Sbjct: 249 DNKFIKGRIVHVTYA 263
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYL--PRDYYSGEPRGFGFIQFVEPDDAAEAK 100
+L V+N+ + + IR+ FE+ G + I L +D + GFGF+++ + +DA A
Sbjct: 505 TLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAINAI 564
Query: 101 RHMDGQVLLGRELTV 115
+ + G+V+ G + +
Sbjct: 565 KTLQGKVIDGHAVQI 579
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
+ LLV+N+ + +++R F +G ++ + LP+ G+ +GF F+++ +AA A
Sbjct: 602 VSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKV-DGQNKGFAFVEYATKQEAANA 660
Query: 100 KRHMDGQVLLGRELTVVFAEE 120
+ GR L + +A++
Sbjct: 661 MAALKNSHFYGRHLIIEYAKD 681
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
++++NL + +++ FE+FG I D + R G R FGFI F D A A M
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGNSRKFGFIGFENEDQAQTAITKM 62
Query: 104 DGQVLLGRELTVVFA 118
+G + +L V A
Sbjct: 63 NGAYIQSSKLQVSLA 77
>gi|221488339|gb|EEE26553.1| serine/arginine rich splicing factor, putative [Toxoplasma gondii
GT1]
gi|221508841|gb|EEE34410.1| RRM domain-containing protein [Toxoplasma gondii VEG]
Length = 170
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 56 EDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
+++R FE+FG I+D+YLP DY++GEPRGFGF++F DA +A + +L G + V
Sbjct: 6 QEVRAAFEEFGPIRDVYLPLDYHTGEPRGFGFVEFESSKDAYDAMHQLHNTLLNGSTIHV 65
Query: 116 VFAEENRKKPSDM 128
A++ R P M
Sbjct: 66 TIAKKGRSDPMQM 78
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
+ + NL +C +DIR+ F++FG I +I+LP D + + +GFGF+ FV P DA +A M
Sbjct: 189 IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEM 248
Query: 104 DGQVLLGRELTVVFA 118
D + + GR + V +A
Sbjct: 249 DNKFIKGRIVHVTYA 263
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYL--PRDYYSGEPRGFGFIQFVEPDDAAEAK 100
+L V+N+ + + IR+ FE+ G + I L +D + GFGF+++ + +DA A
Sbjct: 505 TLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAINAI 564
Query: 101 RHMDGQVLLGRELTV 115
+ + G+V+ G + +
Sbjct: 565 KTLQGKVIDGHAVQI 579
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
+ LLV+N+ + +++R F +G ++ + LP+ G+ +GF F+++ +AA A
Sbjct: 602 VSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKV-DGQNKGFAFVEYATKQEAANA 660
Query: 100 KRHMDGQVLLGRELTVVFAEE 120
+ GR L + +A++
Sbjct: 661 MAALKNSHFYGRHLIIEYAKD 681
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
++++NL + +++ FE+FG I D + R G R FGFI F D A A M
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGNSRKFGFIGFENEDQAQTAITKM 62
Query: 104 DGQVLLGRELTVVFA 118
+G + +L V A
Sbjct: 63 NGAYIQSSKLQVSLA 77
>gi|388494870|gb|AFK35501.1| unknown [Medicago truncatula]
Length = 93
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 35/41 (85%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSG 80
LPTSLLVRNL DCRPED+ PF QFG +KD+YLPRDYY+G
Sbjct: 41 LPTSLLVRNLAKDCRPEDLHDPFGQFGPVKDVYLPRDYYTG 81
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+V+ GRE+TV FA+
Sbjct: 77 LDGRVVDGREITVQFAK 93
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
+ + NL +C +DIR+ F++FG I +I+LP D + + +GFGF+ FV P DA +A M
Sbjct: 188 IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEM 247
Query: 104 DGQVLLGRELTVVFA 118
D + + GR + V +A
Sbjct: 248 DNKFIKGRIVHVTYA 262
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYL--PRDYYSGEPRGFGFIQFVEPDDAAEAK 100
+L ++NL + + IR+ FE+ G + + L +D + GFGF+++ +DA A
Sbjct: 517 TLYIKNLSFKTKEDVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFVEYARHEDAINAI 576
Query: 101 RHMDGQVLLGRELTV 115
+ + G+V+ G + +
Sbjct: 577 KTLQGKVIDGHAVQI 591
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
+ LLV+N+ + +++R F +G ++ + LP+ G+ +GF F+++ +AA A
Sbjct: 614 VSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKV-DGQNKGFAFVEYATKQEAANA 672
Query: 100 KRHMDGQVLLGRELTVVFAEE 120
+ GR L + +A++
Sbjct: 673 MAALKNSHFYGRHLIIEYAKD 693
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
++++NL + +++ FE+FG I D + R G R FGFI F D A A M
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGVSRKFGFIGFENEDQAQTAITKM 62
Query: 104 DGQVLLGRELTVVFA 118
+G + +L V A
Sbjct: 63 NGAYIQSSKLQVSLA 77
>gi|326437616|gb|EGD83186.1| hypothetical protein PTSG_03817 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S+ V N+ R ED+R F++FG I DIY+PR + +PRG+ F++F+ DA +A +H
Sbjct: 14 SVKVDNIDRSTREEDLREAFKEFGEIGDIYMPRYRDTMDPRGYAFVRFINERDAEDAIKH 73
Query: 103 MDGQVLLGRELTVVFAE 119
MDGQ L G+E+ A+
Sbjct: 74 MDGQQLNGKEVYCQLAK 90
>gi|343961547|dbj|BAK62363.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
Length = 221
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR E++G + D Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVSEKYGRVGDAYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 74 AMDGAVLDGRELRVQMA 90
>gi|388490247|ref|NP_001253264.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|402894987|ref|XP_003910620.1| PREDICTED: serine/arginine-rich splicing factor 8 [Papio anubis]
gi|387542734|gb|AFJ71994.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+PR+ ++ PRGF F++F + DA +
Sbjct: 11 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 70
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
A+ MDG L GREL V A R+ R RE
Sbjct: 71 AEAAMDGAELDGRELRVQVARYGRRDLPRSRQRE 104
>gi|326930671|ref|XP_003211466.1| PREDICTED: hypothetical protein LOC100548975 [Meleagris gallopavo]
Length = 239
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLGRELTVVFAEENR 122
MDG VL GR +E+ R
Sbjct: 74 AMDGAVLDGRXXXATRSEQWR 94
>gi|380809044|gb|AFE76397.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|384944954|gb|AFI36082.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+PR+ ++ PRGF F++F + DA +
Sbjct: 11 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 70
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRARE 132
A+ MDG L GREL V A R+ R RE
Sbjct: 71 AEAAMDGAELDGRELRVQVARYGRRDLPRSRQRE 104
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F ++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+V+ GRE+TV FA+
Sbjct: 77 LDGRVVDGREITVQFAK 93
>gi|291224278|ref|XP_002732132.1| PREDICTED: splicing factor, arginine/serine-rich 2-like
[Saccoglossus kowalevskii]
Length = 230
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SL V NL + PED+RR FE++G + D+Y+PRD ++ E RGF F+++ + DA +A
Sbjct: 15 SLKVDNLTYRTTPEDLRRCFEKYGDVGDVYIPRDRFTRESRGFAFVRYYDKRDAEDALDA 74
Query: 103 MDGQVLLGRELTVVFA 118
MDG L GREL V A
Sbjct: 75 MDGATLDGRELRVQMA 90
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F ++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+V+ GRE+TV FA+
Sbjct: 77 LDGRVVDGREITVQFAK 93
>gi|395533366|ref|XP_003768731.1| PREDICTED: serine/arginine-rich splicing factor 2 [Sarcophilus
harrisii]
Length = 224
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQ---FGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
TSL V NL + P+ +RR FE+ +G + D+Y+PRD Y+ E RGF F++F + DA +
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKDGRYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAED 73
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A MDG VL GREL V A
Sbjct: 74 AMDAMDGAVLDGRELRVQMA 93
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++P+D +GE RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+TV FA+
Sbjct: 77 LDGRMVDGREITVQFAK 93
>gi|217073798|gb|ACJ85259.1| unknown [Medicago truncatula]
Length = 280
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++P+D +GE RGF F+++ D+A++A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+TV FA+
Sbjct: 77 LDGRMVDGREITVQFAK 93
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++P+D +GE RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+TV FA+
Sbjct: 77 LDGRMVDGREITVQFAK 93
>gi|389609107|dbj|BAM18165.1| serine/arginine rich splicing factor [Papilio xuthus]
Length = 151
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + ED+RR FE+ G + DIY+PRD Y+ E RGF F++F + DA +A
Sbjct: 2 VSLKVDNLTYRTTAEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFDRRDAEDALD 61
Query: 102 HMDGQVLLGRELTVVFA 118
+DG++L GREL V A
Sbjct: 62 SLDGRMLDGRELRVQMA 78
>gi|397516519|ref|XP_003828475.1| PREDICTED: uncharacterized protein LOC100992382 [Pan paniscus]
Length = 384
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+PR+ ++ PRGF F++F + DA +
Sbjct: 157 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 216
Query: 99 AKRHMDGQVLLGRELTV 115
A+ MDG L GREL V
Sbjct: 217 AEAAMDGAELDGRELRV 233
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 53/77 (68%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++PRD +GE RGF F+++ D+A++A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+TV FA+
Sbjct: 77 LDGRMVDGREITVQFAK 93
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++P+D +GE RGF F+++ D+A++A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+TV FA+
Sbjct: 77 LDGRMVDGREITVQFAK 93
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like [Callithrix
jacchus]
Length = 295
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+PR+ ++ PRGF F++F + DA +
Sbjct: 11 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQRDAED 70
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A+ MDG L GREL V A
Sbjct: 71 AEAAMDGAELDGRELRVQVA 90
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++P+D +GE RGF F+++ D+A++A
Sbjct: 17 SLLVLNVTFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+TV FA+
Sbjct: 77 LDGRMVDGREITVQFAK 93
>gi|388521979|gb|AFK49051.1| unknown [Lotus japonicus]
Length = 122
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYG 162
MDGQ+LLGRELTVVFAEENRKKP++MRARER R R Y RSP Y+RSP Y
Sbjct: 1 MDGQILLGRELTVVFAEENRKKPAEMRARERHSARERSYD----YRRSPRG-YSRSPRYA 55
Query: 163 RDYSPPP 169
R YS P
Sbjct: 56 RTYSRSP 62
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F ++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+V+ GRE+TV FA+
Sbjct: 77 LDGRVVDGREITVQFAK 93
>gi|307106243|gb|EFN54489.1| hypothetical protein CHLNCDRAFT_17896, partial [Chlorella
variabilis]
Length = 63
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 47/62 (75%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGREL 113
R E++R FE++G I+D+YLP+DYYSG P+GFGFI+F++ DA EA ++D + GRE+
Sbjct: 1 RAEEVRGKFERYGPIRDVYLPKDYYSGRPKGFGFIEFLDIRDAEEAIYNLDRTMFGGREI 60
Query: 114 TV 115
V
Sbjct: 61 QV 62
>gi|225448281|ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
gi|296086805|emb|CBI32954.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++PRD +GE RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+TV FA+
Sbjct: 77 LDGRIVDGREITVQFAK 93
>gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]
Length = 272
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+PR+ ++ PRGF F++F + DA +
Sbjct: 1 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 60
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A+ MDG L GREL V A
Sbjct: 61 AEAAMDGAELDGRELRVQVA 80
>gi|443730022|gb|ELU15717.1| hypothetical protein CAPTEDRAFT_175255 [Capitella teleta]
Length = 163
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + ED+ + FE++G + D+Y+PRD Y+ E +GF F+++ E DA +A
Sbjct: 12 VSLKVDNLTYRTSKEDLLQAFEKYGEVGDVYIPRDPYTRENKGFAFVRYYEKRDAEDAID 71
Query: 102 HMDGQVLLGRELTV 115
MDG VL GREL V
Sbjct: 72 SMDGAVLDGRELRV 85
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V NL + P+ +RR FE++G + D+Y+PR+ ++ PRGF F++F + DA +A+
Sbjct: 14 ITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEA 73
Query: 102 HMDGQVLLGRELTVVFAEENRK 123
MDG L GREL V A R+
Sbjct: 74 AMDGAELDGRELRVQVARYGRR 95
>gi|332837526|ref|XP_001139465.2| PREDICTED: serine/arginine-rich splicing factor 8 isoform 1 [Pan
troglodytes]
gi|410045734|ref|XP_003952050.1| PREDICTED: serine/arginine-rich splicing factor 8 isoform 2 [Pan
troglodytes]
gi|410226370|gb|JAA10404.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410255620|gb|JAA15777.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410295516|gb|JAA26358.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348530|gb|JAA40869.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348532|gb|JAA40870.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348534|gb|JAA40871.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
Length = 282
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V NL + P+ +RR FE++G + D+Y+PR+ ++ PRGF F++F + DA +A+
Sbjct: 14 ITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEA 73
Query: 102 HMDGQVLLGRELTVVFAEENRK 123
MDG L GREL V A R+
Sbjct: 74 AMDGAELDGRELRVQVARYGRR 95
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V NL + P+ +RR FE++G + D+Y+PR+ ++ PRGF F++F + DA +A+
Sbjct: 14 ITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEA 73
Query: 102 HMDGQVLLGRELTVVFAEENRK 123
MDG L GREL V A R+
Sbjct: 74 AMDGAELDGRELRVQVARYGRR 95
>gi|307219198|ref|NP_001182520.1| splicing factor, arginine/serine-rich 2B [Pongo abelii]
Length = 282
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+PR+ ++ PRGF F++F + DA +
Sbjct: 11 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 70
Query: 99 AKRHMDGQVLLGRELTVVFAEENRK 123
A+ MDG L GREL V A R+
Sbjct: 71 AEAAMDGAELDGRELRVQVARYGRR 95
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++P+D +GE RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+TV FA+
Sbjct: 77 LDGRMVDGREITVQFAK 93
>gi|312066967|ref|XP_003136521.1| hypothetical protein LOAG_00933 [Loa loa]
Length = 345
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 75/141 (53%), Gaps = 28/141 (19%)
Query: 30 GRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPR--GFGF 87
GR G R ++PT L VR + + RP+D+R FE+ G ++D+Y+P DYY+ E R G G
Sbjct: 3 GRSGRYRDDEIPT-LYVRQVHYSARPDDLRALFERMGPVRDVYIPLDYYTRESRVGGVGK 61
Query: 88 IQ--------------------FVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSD 127
+Q F DA +A R ++G +LGR + V +AE RK ++
Sbjct: 62 VQAFSVSGISSTNYQANLQVQVFEFTRDAEDALRKLNGASILGRPIEVEWAEGQRKTKTE 121
Query: 128 MRARE-----RGRGRFRRRSP 143
MRAR+ R R R+R RSP
Sbjct: 122 MRARDSYSSYRVRNRYRSRSP 142
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G I DIY+PRD +G+ RGF F+++ D+A +A
Sbjct: 18 SLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVER 77
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+ V FA+
Sbjct: 78 LDGRLVDGREIMVQFAK 94
>gi|401419086|ref|XP_003874033.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490267|emb|CBZ25527.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 342
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%)
Query: 29 RGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFI 88
RGR D +LLVR L H R FE FG I + RD ++GE RGFGF+
Sbjct: 11 RGRQSVATAADSKLNLLVRFLDHGVDDSQFRAFFEPFGEITSSMVMRDIFTGESRGFGFV 70
Query: 89 QFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSP 143
+F DAA A R DG+ L G+ + V++A++ + R + F R P
Sbjct: 71 RFARSADAARALRECDGKRLGGKAVNVIWAKQQHDDTPAGQERLKMNKLFLRNVP 125
>gi|313235509|emb|CBY10964.1| unnamed protein product [Oikopleura dioica]
Length = 360
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 58/87 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+S+ +R + RP++I+ F++FG IK+I +P D+ + EPRGF ++ F E + A EA+
Sbjct: 11 SSICIRPIDACIRPDEIKAEFKEFGEIKEIRIPVDFETREPRGFAYVDFEEVESAIEARD 70
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM 128
++G++L R++ V ++ +K PS+M
Sbjct: 71 IINGRILFDRKVQVYYSNGTKKLPSEM 97
>gi|443726785|gb|ELU13844.1| hypothetical protein CAPTEDRAFT_222122 [Capitella teleta]
Length = 99
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ------FVEPDD 95
TSL VRNL R E++R F ++G I D+YLP D+Y+ PRGF +IQ F +P D
Sbjct: 10 TSLYVRNLPDTSRSEELRSLFGKYGPISDVYLPLDFYTRRPRGFSYIQYPSVSKFKDPRD 69
Query: 96 AAEAKRHMDGQVLLGRELTVVFAEENRK 123
A +A H+D G +L + FA +RK
Sbjct: 70 AEDALYHLDRTRFFGCDLEIEFARGDRK 97
>gi|183221265|ref|YP_001839261.1| RNA binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|189911356|ref|YP_001962911.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167776032|gb|ABZ94333.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167779687|gb|ABZ97985.1| RNA binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 89
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
+ + V NL+ + E+IR+ F +GAI+D+ + D +G RGF FI + P +A EA
Sbjct: 2 VSNKIYVGNLKFSLKEENIRQIFSVYGAIQDLKMIHDRETGNFRGFAFITYASPSEAEEA 61
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSD 127
M+GQ + GR L V FAE+ RK+ +
Sbjct: 62 VAQMNGQPIDGRNLKVTFAEDKRKEKQN 89
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 49/73 (67%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + CR +++R FE FG + ++++P D + +P+GF FI FV P+ A++A +++
Sbjct: 541 LFVRNLPYACREDELRELFEAFGPLSELHMPIDGETKKPKGFAFITFVLPEHASQAFQNL 600
Query: 104 DGQVLLGRELTVV 116
D + GR L V+
Sbjct: 601 DNTIFQGRLLHVL 613
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L+VRN+ + P+++++ F G I + LPR Y G RGF FI+F +A +A +
Sbjct: 1007 LVVRNIAFEATPKEVQQLFSPHGNIVSVRLPRKQYDGTHRGFAFIEFSTKQEARDAFSAL 1066
Query: 104 DGQVLLGRELTVVFAEEN 121
G L GR L + FAE++
Sbjct: 1067 SGTHLYGRRLAMEFAEDD 1084
>gi|226476662|emb|CAX72223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + +D+RR F +FG + DIY+PRD Y+ E RGF F+++ +A
Sbjct: 12 DGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADC 71
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R MDG + GRE+ V A+ R P+
Sbjct: 72 AIRGMDGHKVDGREVRVQIAKYGRPTPN 99
>gi|270012859|gb|EFA09307.1| hypothetical protein TcasGA2_TC030627 [Tribolium castaneum]
Length = 161
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + PED+RR FE+ G + DIY+PRD ++ E RGF F+++ + +DA +A
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRFTRESRGFAFVRYRDAEDALDA-- 71
Query: 102 HMDGQVLLGRELTVVFA 118
MDG++L GREL V A
Sbjct: 72 -MDGRMLDGRELRVQMA 87
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++PRD +GE RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIER 76
Query: 103 MDGQVLLGRELTVVFAEENRK 123
+DG+ + GR + V FA+ RK
Sbjct: 77 LDGREVDGRHIVVQFAKYGRK 97
>gi|324510397|gb|ADY44347.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
gi|324520781|gb|ADY47708.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
Length = 122
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SL + N+ + P+D+RR FE++G I DI++PRD Y+ + +GFGF+++ DA A
Sbjct: 15 SLKIDNISYQTTPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRYYSRRDAEYAMDR 74
Query: 103 MDGQVLLGRELTVVFAEENR 122
MDG+ + GRE+ V A R
Sbjct: 75 MDGRWIDGREIRVALARYER 94
>gi|426370158|ref|XP_004052038.1| PREDICTED: serine/arginine-rich splicing factor 8 [Gorilla gorilla
gorilla]
Length = 282
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V NL + P+ +R FE++G + D+Y+PR+ ++ P GF F++F + DA +A+
Sbjct: 14 ITLKVDNLTYRTSPDSLRPVFEKYGRVGDVYIPREPHTKAPWGFAFVRFHDRSDAQDAEA 73
Query: 102 HMDGQVLLGRELTVVFAEENRK 123
MDG VL GREL V A R+
Sbjct: 74 AMDGAVLDGRELRVQMARYGRR 95
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G I DIY+PRD +G+ RGF F+++ D+A +A
Sbjct: 18 SLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 77
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+ V FA+
Sbjct: 78 LDGRLVDGREIMVQFAK 94
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T++ V N+ D R ++++R F ++G I LP DYYSG P+GF F+QF + DA E+
Sbjct: 6 TTIYVGNIPEDLRRDELKRIFGRYGNIVAATLPVDYYSGIPKGFAFVQFEDIRDAEESFD 65
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGR 137
+ G + R L + FA +K P +MR R RGR
Sbjct: 66 RLQGYRIGKRSLRLEFATGTKKTPDEMRTVTR-RGR 100
>gi|332837543|ref|XP_001139222.2| PREDICTED: uncharacterized protein LOC738374 [Pan troglodytes]
Length = 279
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+P + ++ PRGF F++F + DA +
Sbjct: 11 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRSDAQD 70
Query: 99 AKRHMDGQVLLGRELTVVFAEENRK 123
A+ MDG VL REL V A R+
Sbjct: 71 AEAAMDGAVLDERELRVRMARYGRR 95
>gi|301765996|ref|XP_002918431.1| PREDICTED: hypothetical protein LOC100477809 [Ailuropoda
melanoleuca]
Length = 182
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLG 110
MDG VL G
Sbjct: 74 AMDGAVLDG 82
>gi|281342789|gb|EFB18373.1| hypothetical protein PANDA_006871 [Ailuropoda melanoleuca]
Length = 173
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQVLLG 110
MDG VL G
Sbjct: 74 AMDGAVLDG 82
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + D+++PRD +GE RGF F+++ ++A +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAEEAQKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+V+ GRE+ V FA+
Sbjct: 77 LDGRVVDGREIMVQFAK 93
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F ++G + DI++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG ++ GRE+TV FA+
Sbjct: 77 LDGTMVDGREITVQFAK 93
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F ++G + DI++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG ++ GRE+TV FA+
Sbjct: 77 LDGTMVDGREITVQFAK 93
>gi|146083790|ref|XP_001464836.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
gi|398013683|ref|XP_003860033.1| hypothetical protein, unknown function [Leishmania donovani]
gi|134068931|emb|CAM67072.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
gi|322498252|emb|CBZ33326.1| hypothetical protein, unknown function [Leishmania donovani]
Length = 342
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%)
Query: 29 RGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFI 88
RGR D +LLVR L H R FE FG I + RD ++GE RGFGF+
Sbjct: 11 RGRPSVATAADSKLNLLVRFLDHGVDDSQFRVFFEPFGEITSSMVMRDIFTGESRGFGFV 70
Query: 89 QFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSP 143
+F DAA A R DG+ L G+ + V++A++ + R + F R P
Sbjct: 71 RFARSADAARALRECDGKRLGGKAVNVIWAKQQHDDTPAGQERLKMNKLFLRNVP 125
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S+LV N+ +D+ F+++G + DIY+PRD+ +G+PRGF F+++ D+A +A
Sbjct: 19 SILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARDAIDG 78
Query: 103 MDGQVLLGRELTVVFAEE--NRKKPSDMRARERG---RGRFRRRSP 143
+DG GR L V FA+ N +K R E RGR R RSP
Sbjct: 79 LDGMRFDGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSRSP 124
>gi|157867743|ref|XP_001682425.1| hypothetical protein LMJF_18_0190 [Leishmania major strain
Friedlin]
gi|68125879|emb|CAJ03478.1| hypothetical protein LMJF_18_0190 [Leishmania major strain
Friedlin]
Length = 342
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%)
Query: 29 RGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFI 88
RGR D +LLVR L H R FE FG I + RD ++GE RGFGF+
Sbjct: 11 RGRPSVATAADSKLNLLVRFLDHGVDDSQFRVFFEPFGEITSSMVMRDIFTGESRGFGFV 70
Query: 89 QFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSP 143
+F DAA A R DG+ L G+ + V++A++ + R + F R P
Sbjct: 71 RFARSADAARALRECDGKRLGGKAVNVIWAKQQHDDTPAGQERLKMNKLFLRNVP 125
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G I DIY+PRD +G+ RGF F+++ D+A +A
Sbjct: 18 SLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 77
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+ V FA+
Sbjct: 78 LDGRLVDGREIMVQFAK 94
>gi|395841993|ref|XP_003793806.1| PREDICTED: uncharacterized protein LOC100943026 [Otolemur
garnettii]
Length = 308
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
++ TS+ V NL + +RR FE++G I D+Y+PRD + E RGF FI+F A +
Sbjct: 10 EVMTSIKVNNLTYHTSSYTLRRMFEKYGPIDDVYIPRDRLTNESRGFAFIRFCYKHHAED 69
Query: 99 AKRHMDGQVLLGRELTVVFAE-----ENRKKPSDMRARERGRGRFRRRS 142
A +DG +L G EL V A E + PS++ R RG G R RS
Sbjct: 70 ALGALDGILLDGHELQVQLAHCACPLELCQGPSEL-GRGRGPGCNRSRS 117
>gi|408794570|ref|ZP_11206175.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408461805|gb|EKJ85535.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 89
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
+ + V NL+ + E+IR+ F +G I+D+ + D +G RGF FI + P++A EA
Sbjct: 2 ISKKIYVGNLKFTLKEENIRQIFSVYGVIQDLKMIHDRETGNFRGFAFITYANPEEAEEA 61
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSD 127
M+GQ + GR L V FAE+ RK+ +
Sbjct: 62 VTQMNGQPVDGRNLKVTFAEDKRKEKQN 89
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDK 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG++L GRE+ V FA+
Sbjct: 77 LDGRMLDGREIMVQFAK 93
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G I DIY+PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+ V FA+
Sbjct: 77 LDGRLVDGREIMVQFAK 93
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G I DIY+PRD +G+ RGF F+++ D+A +A
Sbjct: 18 SLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVER 77
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+ V FA+
Sbjct: 78 LDGRLVDGREIMVQFAK 94
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDK 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG++L GRE+ V FA+
Sbjct: 77 LDGRMLDGREIMVQFAK 93
>gi|219115986|ref|XP_002178788.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409555|gb|EEC49486.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 89
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L V L + +R F FGA+K + +P DY SG+ +GF F++ +PDD EA +M
Sbjct: 8 LYVGGLADSASVQVVRAAFIPFGAVKSLDIPMDYVSGKHKGFAFVELGDPDDVTEAIFNM 67
Query: 104 DGQVLLGRELTVVFAEENR 122
DG LLGR L V A+ N+
Sbjct: 68 DGAELLGRTLKVSLAQANQ 86
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DIY+PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+ V FA+
Sbjct: 77 LDGRLVDGREMMVQFAK 93
>gi|320165916|gb|EFW42815.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 113
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQF 90
+L VRNL +D RP+DIR F + G +KDIYLPRDYYS + RGFG++++
Sbjct: 62 ATLHVRNLTYDARPDDIREIFAKCGNVKDIYLPRDYYSNKLRGFGYVEY 110
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S+LV N+ +D+ F+++G + DIY+PRD+ +G+PRGF F+++ D+A +A
Sbjct: 19 SILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARDAIDG 78
Query: 103 MDGQVLLGRELTVVFAEE--NRKKPSDMRARERG---RGRFRRRSP 143
+DG GR L V FA+ N +K R E RGR R RSP
Sbjct: 79 LDGXRFDGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSRSP 124
>gi|388505176|gb|AFK40654.1| unknown [Medicago truncatula]
Length = 267
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ + + F+++G + DI++PRD +GE RGF F+++ D+A++A
Sbjct: 17 SLLVLNITFRTTADGLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+TV FA+
Sbjct: 77 LDGRMVDGREITVQFAK 93
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYQDEAQKAVEK 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+V+ GRE+ V FA+
Sbjct: 77 LDGRVVDGREIMVRFAK 93
>gi|313216842|emb|CBY38074.1| unnamed protein product [Oikopleura dioica]
Length = 360
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 57/87 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+S+ + + RP++I+ F++FG IK+I +P D+ + EPRGF ++ F E + A EA+
Sbjct: 11 SSICIHPIDACIRPDEIKAEFKEFGEIKEIRIPVDFETREPRGFAYVDFEEVESAIEARD 70
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM 128
++G++L R++ V ++ +K PS+M
Sbjct: 71 IINGRILFDRKVQVYYSNGTKKLPSEM 97
>gi|256092430|ref|XP_002581940.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230938|emb|CCD77355.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 151
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + +D+RR F +FG + DIY+PRD Y+ E RGF F+++ +A
Sbjct: 12 DGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADC 71
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R MDG + GRE+ V A+ R P+
Sbjct: 72 AIRGMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|159164254|pdb|2DNM|A Chain A, Solution Structure Of Rna Binding Domain In Srp46 Splicing
Factor
Length = 103
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V NL + P+ +RR FE++G + D+Y+PR+ ++ PRGF F++F + DA +
Sbjct: 11 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 70
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A+ MDG L GREL V A R+ S
Sbjct: 71 AEAAMDGAELDGRELRVQVARYGRRDLS 98
>gi|224099521|ref|XP_002334472.1| predicted protein [Populus trichocarpa]
gi|222872360|gb|EEF09491.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++PRD +GE RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+V+ GRE+TV FA+
Sbjct: 77 LDGRVVDGREITVQFAK 93
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DIY+PRD+ +G+PRGF F+++ D+A +A
Sbjct: 19 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDG 78
Query: 103 MDGQVLLGRELTVVFAEE--NRKKPSDMRARERG---RGRFRRRSP 143
+DG GR L V FA+ N +K R E RGR R RSP
Sbjct: 79 LDGMRFDGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSRSP 124
>gi|224073347|ref|XP_002304081.1| predicted protein [Populus trichocarpa]
gi|222841513|gb|EEE79060.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++PRD +GE RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+V+ GRE+TV FA+
Sbjct: 77 LDGRVVDGREITVQFAK 93
>gi|294868078|ref|XP_002765370.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239865389|gb|EEQ98087.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 204
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 35 GRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPD 94
G+ DL S+ V + R +D+R F +FG I D+++P D Y+G RGFGF++F E
Sbjct: 4 GQLNDL-FSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERR 62
Query: 95 DAAEAKRHMDGQVLLGRELTVVFAEENRK 123
DA +A R MD + G +TV A N++
Sbjct: 63 DAEDAIRDMDNKEFQGCRITVAAAMYNKE 91
>gi|3892187|gb|AAC78303.1| RNA-binding protein [Schistosoma japonicum]
gi|226476664|emb|CAX72224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476666|emb|CAX72225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476668|emb|CAX72226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476670|emb|CAX72227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476672|emb|CAX72228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476674|emb|CAX72229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481907|emb|CAX79219.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481909|emb|CAX79220.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481911|emb|CAX79221.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481913|emb|CAX79222.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481915|emb|CAX79223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481917|emb|CAX79224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481919|emb|CAX79225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481923|emb|CAX79227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481925|emb|CAX79228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481927|emb|CAX79229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481929|emb|CAX79230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481933|emb|CAX79232.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481935|emb|CAX79233.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481937|emb|CAX79234.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481939|emb|CAX79235.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481941|emb|CAX79236.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481943|emb|CAX79237.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481945|emb|CAX79238.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481947|emb|CAX79239.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481949|emb|CAX79240.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481951|emb|CAX79241.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481953|emb|CAX79242.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481955|emb|CAX79243.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481957|emb|CAX79244.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481959|emb|CAX79245.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481961|emb|CAX79246.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + +D+RR F +FG + DIY+PRD Y+ E RGF F+++ +A
Sbjct: 12 DGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADC 71
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R MDG + GRE+ V A+ R P+
Sbjct: 72 AIRGMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|167518892|ref|XP_001743786.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777748|gb|EDQ91364.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V N+ D + +R F+ FG I DIY+PRD + RGF F++F E DA +
Sbjct: 11 DAMFSLKVDNITSDMTEDMMRDLFKDFGEIGDIYMPRDRNTNRSRGFCFVRFYEEADADK 70
Query: 99 AKRHMDGQVLLGRELTVVFAE 119
A MDG GR+L V A+
Sbjct: 71 AAEKMDGHAFEGRDLIVQKAK 91
>gi|313236719|emb|CBY11975.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 57/90 (63%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VR + RP++I+ F ++G ++D+++P D+ + +PRGF +I+F +DA A++
Sbjct: 56 TSLYVRPIDGSTRPDEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYIEFESIEDAEYAQK 115
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRAR 131
++ L + L V FA+ +RK P M+ +
Sbjct: 116 KLNRTRLGDKMLHVDFAQGDRKTPGQMKTQ 145
>gi|224066947|ref|XP_002302293.1| predicted protein [Populus trichocarpa]
gi|222844019|gb|EEE81566.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + D+++PRD +GE RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYADEAQKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+V+ GRE+ V FA+
Sbjct: 77 LDGRVVDGREIMVQFAK 93
>gi|226476676|emb|CAX72230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + +D+RR F +FG + DIY+PRD Y+ E RGF F+++ +A
Sbjct: 12 DGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYYTDREADC 71
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R MDG + GRE+ V A+ R P+
Sbjct: 72 AIRGMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|313246638|emb|CBY35523.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 57/90 (63%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL VR + RP++I+ F ++G ++D+++P D+ + +PRGF +I+F +DA A++
Sbjct: 56 TSLYVRPIDGSTRPDEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYIEFESIEDAEYAQK 115
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRAR 131
++ L + L V FA+ +RK P M+ +
Sbjct: 116 KLNRTRLGDKMLHVDFAQGDRKTPGQMKTQ 145
>gi|156349201|ref|XP_001621959.1| hypothetical protein NEMVEDRAFT_v1g143061 [Nematostella vectensis]
gi|156381130|ref|XP_001632119.1| predicted protein [Nematostella vectensis]
gi|156208328|gb|EDO29859.1| predicted protein [Nematostella vectensis]
gi|156219170|gb|EDO40056.1| predicted protein [Nematostella vectensis]
Length = 127
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + ED+++ F+++G + DIY+PRD + E RGF F++F E DA +A
Sbjct: 16 TSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMD 75
Query: 102 HMDGQVLLGRELTVVFA 118
MD +L GRE+ V A
Sbjct: 76 CMDRHLLDGREVRVQMA 92
>gi|313242082|emb|CBY34259.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL + NL + E +RR F ++G I D+Y+P+D Y GE RGF F++F + DA +A
Sbjct: 13 TSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDKY-GESRGFAFVRFHDKRDAGDAID 71
Query: 102 HMDGQVLLGRELTVVFAEENR 122
+DG+ + GRE+ V +A R
Sbjct: 72 QLDGRDIDGREIRVDYARHER 92
>gi|313227248|emb|CBY22395.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL + NL + E +RR F ++G I D+Y+P+D Y GE RGF F++F + DA +A
Sbjct: 13 TSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDKY-GESRGFAFVRFHDKRDAGDAID 71
Query: 102 HMDGQVLLGRELTVVFAEENR 122
+DG+ + GRE+ V +A R
Sbjct: 72 QLDGRDIDGREIRVDYARHER 92
>gi|21752539|dbj|BAC04206.1| unnamed protein product [Homo sapiens]
gi|119609852|gb|EAW89446.1| splicing factor, arginine/serine-rich 2, isoform CRA_f [Homo
sapiens]
Length = 186
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQV 107
MDG V
Sbjct: 74 AMDGAV 79
>gi|189502900|gb|ACE06831.1| unknown [Schistosoma japonicum]
Length = 138
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + +D+RR F +FG + DIY+PRD Y+ E RGF F+++ +A A R
Sbjct: 2 VSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIR 61
Query: 102 HMDGQVLLGRELTVVFAEENRKKPS 126
MDG + GRE+ V A+ R P+
Sbjct: 62 GMDGHKVDGREVRVQRAKYGRPTPN 86
>gi|324510588|gb|ADY44428.1| RNA-binding protein with serine-rich domain 1-B [Ascaris suum]
Length = 361
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEAKRH 102
L VRNL + E + F +GA+K +P D ++ RG+G+++F DDA +A +H
Sbjct: 220 LCVRNLSRNVTKEHLAEIFGVYGALKSCEMPMDRQHTHLGRGYGYVEFESADDADKALKH 279
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYG 162
MDG + G+E+T + R S+ G RR PPRY P RY P G
Sbjct: 280 MDGGQIDGQEITCELTHQPRTAISN--------GGGRRVLSPPRYRGGSPRRYRSPPRGG 331
Query: 163 R 163
R
Sbjct: 332 R 332
>gi|414866978|tpg|DAA45535.1| TPA: hypothetical protein ZEAMMB73_960766 [Zea mays]
Length = 202
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 83 RGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRAR 131
RGFGF+++V+ +DA+ AK +MDGQ++LGR+L VV+A++ RK PS MR R
Sbjct: 7 RGFGFVEYVDLEDASNAKHYMDGQIVLGRKLRVVYAQDVRKSPSAMRLR 55
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G I DIY+PRD +G+ RGF F+++ D+A +A
Sbjct: 18 SLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 77
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+ V FA+
Sbjct: 78 LDGRLVDGREIMVQFAK 94
>gi|254410328|ref|ZP_05024107.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196182534|gb|EDX77519.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 95
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
S+ V NL +D ED+ F +GA+K + LP D +G PRGFGF++ D+ A
Sbjct: 1 MSIYVGNLSYDVTAEDLSAVFADYGAVKRVQLPTDRETGRPRGFGFVEMETDDEETAAIE 60
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRR 140
+DG +GR + V N+ +P + R R G F R
Sbjct: 61 ALDGAEWMGRNMKV-----NKARPRENRGGNRKNGNFSR 94
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL + NL + E +RR F +FG I D+Y+P+D + GE RGF F++F + DA +A
Sbjct: 13 TSLKIDNLSYRTDAESLRRTFSKFGEIGDVYIPKDKH-GESRGFAFVRFHDKRDAGDAID 71
Query: 102 HMDGQVLLGRELTVVFAEENR 122
+ G+ L GRE+ V +A R
Sbjct: 72 DLAGKDLDGREIRVDYARHER 92
>gi|226481931|emb|CAX79231.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 163
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + +D+RR F +FG + DIY+PRD Y+ E RGF F+++ +A A R
Sbjct: 15 VSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIR 74
Query: 102 HMDGQVLLGRELTVVFAEENRKKPS 126
MDG + GRE+ V A+ R P+
Sbjct: 75 GMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|256092432|ref|XP_002581941.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230939|emb|CCD77356.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + +D+RR F +FG + DIY+PRD Y+ E RGF F+++ +A
Sbjct: 12 DGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADC 71
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R MDG + GRE+ V A+ R P+
Sbjct: 72 AIRGMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|256092428|ref|XP_002581939.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|226481905|emb|CAX79218.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|353230937|emb|CCD77354.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + +D+RR F +FG + DIY+PRD Y+ E RGF F+++ +A
Sbjct: 12 DGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADC 71
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R MDG + GRE+ V A+ R P+
Sbjct: 72 AIRGMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++PRD +GE RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIER 76
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRG 136
+DG+ + GR + V FA+ RK R R G
Sbjct: 77 LDGREVDGRHIVVQFAKYGRKDEPIQRGRITDTG 110
>gi|159474538|ref|XP_001695382.1| nuclear cap-binding protein [Chlamydomonas reinhardtii]
gi|158275865|gb|EDP01640.1| nuclear cap-binding protein [Chlamydomonas reinhardtii]
Length = 143
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEP 93
GG+G + T+L V L + F FG IK++ +P D+ +G RGFGF+++ E
Sbjct: 9 GGKGTNPKTTLYVGGLEESVNEATLHAAFLPFGEIKEVNMPIDHATGTHRGFGFVEYEEK 68
Query: 94 DDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSD 127
DDAA A +M+ L GR L V +A+ + K D
Sbjct: 69 DDAAAAIDNMNNAELFGRVLKVNYAQPMKIKGGD 102
>gi|294942803|ref|XP_002783687.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239896223|gb|EER15483.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 691
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 35 GRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPD 94
G+ DL S+ V + R +D+R F +FG I D+++P D Y+G RGFGF++F E
Sbjct: 505 GQLNDL-FSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERR 563
Query: 95 DAAEAKRHMDGQVLLGRELTVVFAEENRK 123
DA +A R MD + G +TV A N++
Sbjct: 564 DAEDAIRDMDNKEFQGNRITVAAAMYNKE 592
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 50/77 (64%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVEK 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GRE+ V FA+
Sbjct: 77 LDGRNVDGREIMVQFAK 93
>gi|345320496|ref|XP_001519931.2| PREDICTED: hypothetical protein LOC100090925, partial
[Ornithorhynchus anatinus]
Length = 369
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%)
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGREL 113
R ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A ++D + + GR++
Sbjct: 101 RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQI 160
Query: 114 TVVFAEENRKKPSDMRARERGRGRFR 139
+ FA+ +RK ++ + F+
Sbjct: 161 EIQFAQGDRKNFPGCIVQKATKSLFK 186
>gi|380791457|gb|AFE67604.1| serine/arginine-rich splicing factor 8, partial [Macaca mulatta]
Length = 86
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V NL + P+ +RR FE++G + D+Y+PR++++ PRGF F++F DA +A+
Sbjct: 14 ITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHNRRDAEDAED 73
Query: 102 HMDGQVLLGREL 113
MDG L GREL
Sbjct: 74 AMDGAELDGREL 85
>gi|357490719|ref|XP_003615647.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355516982|gb|AES98605.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 140
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 53/77 (68%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++PRD +GE RGF F+++ D+A++A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+++ GRE+TV FA+
Sbjct: 77 LDGRMVDGREITVQFAK 93
>gi|297282509|ref|XP_001113147.2| PREDICTED: splicing factor, arginine/serine-rich 13A-like [Macaca
mulatta]
Length = 98
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 48/68 (70%)
Query: 56 EDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
ED+RR F ++G I D+Y+P D+Y+ PRGF ++QF + DA +A ++D + + GR++ +
Sbjct: 10 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 69
Query: 116 VFAEENRK 123
FA+ +RK
Sbjct: 70 QFAQGDRK 77
>gi|449283101|gb|EMC89804.1| Splicing factor, arginine/serine-rich 2 [Columba livia]
Length = 182
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDGQV 107
MDG V
Sbjct: 74 AMDGAV 79
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
PT L V NL D +D+R FE FG I+ I L D +G +GF F+Q+ P+DA +A
Sbjct: 270 PTRLYVGNLHTDLAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAKKAL 329
Query: 101 RHMDGQVLLGRELTV 115
+H +G L GR+L V
Sbjct: 330 QHCNGMELAGRQLKV 344
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
S+ V NL +D +D+ F ++G +K + LP D +G PRGFGF++ ++ +A
Sbjct: 1 MSIYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIE 60
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSR 149
+DG +GR++ V N+ KP + +RG G RR S P YSR
Sbjct: 61 ALDGAEWMGRDIKV-----NKAKPRE----DRGSGGNRRNS--PNYSR 97
>gi|126660168|ref|ZP_01731286.1| RNA binding protein [Cyanothece sp. CCY0110]
gi|126618533|gb|EAZ89284.1| RNA binding protein [Cyanothece sp. CCY0110]
Length = 98
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
++ V NL +D ED+ F ++G +K + LP D +G PRGFGF++ D+ A
Sbjct: 2 TIYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRPRGFGFVEMESDDEETAAIET 61
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRR 141
+DG +GR++ V N+ KP + R G G FR++
Sbjct: 62 LDGADWMGRQMRV-----NKAKPRENSGR-SGSGSFRKQ 94
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ P D+ F+++G + D Y+PR+ +G RGF F++F + +DA +A
Sbjct: 28 SLLVLNISFRTTPNDLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFRKEEDARKAMEE 87
Query: 103 MDGQVLLGRELTVVFA 118
MDG+ + GR +TV FA
Sbjct: 88 MDGREVDGRSITVQFA 103
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 30 GRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ 89
GRYG RD SLLV N+ +D+ F++ G + DI +PRD +G+ RGF F++
Sbjct: 5 GRYGPPAVRD-SYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVR 63
Query: 90 FVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPR-YS 148
+ D+A +A +DG+ + GR++ V FA+ P+ R +GR PR S
Sbjct: 64 YKYEDEAQKAVDKLDGRTVDGRDIMVQFAKYG---PNAERIH---KGRIVEEISKPRGRS 117
Query: 149 RSPPPRYARSPS-----YGRDYSPPPRRRNY-------SRSVSPHGQNYSRERSYSRSPA 196
RSP P+ Y DY R +Y SRS+ + + +E+ Y R
Sbjct: 118 RSPSPKRRYRADYRDRGYRDDYRDRHYRDDYQDREYRRSRSIERYERERYQEKGYRR--- 174
Query: 197 YDGPRGRSRSP-----HRGQRQSWSPSRSRTPKRNHSVSRSRSRSP 237
R RS SP HR QS S S + +P R RSRSP
Sbjct: 175 ----RSRSISPDYDRRHRKNGQSRSYSLTASPSRPRDEHSPRSRSP 216
>gi|198438021|ref|XP_002129706.1| PREDICTED: similar to cold inducible RNA binding protein [Ciona
intestinalis]
Length = 469
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
L + + L DC +D+ + F FG I + + RD + RGF F+ F D A EA
Sbjct: 6 LDARIFIGGLDLDCSEQDLEKAFGMFGDISQVMVLRDRETNVSRGFAFMSFESQDSADEA 65
Query: 100 KRHMDGQVLLGRELTVVFAE 119
R M G ++GR +TV AE
Sbjct: 66 IRRMHGVEIMGRCVTVRKAE 85
>gi|209527224|ref|ZP_03275736.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376003288|ref|ZP_09781101.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|209492382|gb|EDZ92725.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375328318|emb|CCE16854.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
Length = 93
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
S+ V NL +D P+D+ F Q+G +K +P D +G RGFGF++ V D+ +A
Sbjct: 1 MSIYVGNLSYDVTPDDLSEVFAQYGTVKRSMIPTDRETGRSRGFGFVEMVNEDEETKAIE 60
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRR 140
+DG +GR L V N+ +P R + RG F+R
Sbjct: 61 ALDGAEWMGRSLKV-----NKARP---RENNKQRGGFKR 91
>gi|294921861|ref|XP_002778742.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239887462|gb|EER10537.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 840
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 35 GRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPD 94
G+ DL S+ V + R +D+R F +FG I D+++P D Y+G RGFGF++F E
Sbjct: 747 GQLNDL-FSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERR 805
Query: 95 DAAEAKRHMDGQVLLGRELTVVFAEENRK 123
DA +A R MD + G +TV A N++
Sbjct: 806 DAEDAIRDMDNKEFQGNRITVAAAMYNKE 834
>gi|260826177|ref|XP_002608042.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
gi|229293392|gb|EEN64052.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
Length = 111
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ------FVEPDD 95
TSL VRN+ RP+++R F ++G I D+Y+P D+++ PRGF ++Q F + D
Sbjct: 10 TSLYVRNVPDGTRPDELRSLFGKYGPIVDVYIPLDHFTRHPRGFAYVQYPFLLTFEDVRD 69
Query: 96 AAEAKRHMDGQVLLGRELTVVFAEENRK 123
A +A +D GREL + FAE +RK
Sbjct: 70 AEDAMYGLDRSRFYGRELEIQFAEGDRK 97
>gi|2951777|dbj|BAA25105.1| translation initiation factor 3 [Schizosaccharomyces pombe]
Length = 280
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 8 PSPPPRGSGGGYGRRGRSPSPRGRYGGGRG---------RDLPTSLLVRNLRHDCRPEDI 58
SP + G G +GR +P R G GR RD +L V NL D R E++
Sbjct: 157 ASPVSSRASGALGEKGRYIAPHLRAGSGRESGDSMFKRERDDSATLRVTNLSDDTREEEL 216
Query: 59 RRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDG 105
R F +FG I+ +YL +D +G +GF F+ + + D A +A+ +DG
Sbjct: 217 RDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDG 263
>gi|44890463|gb|AAH66958.1| SFRS2 protein [Homo sapiens]
Length = 179
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDG 105
MDG
Sbjct: 74 AMDG 77
>gi|444727801|gb|ELW68279.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 218
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDG 105
MDG
Sbjct: 74 AMDG 77
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 30 GRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ 89
GR+G RD SLLV N+ +D+ F+++G + DI++PRD +G+ RGF F++
Sbjct: 5 GRFGPPDIRD-TYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDKRTGDSRGFAFVR 63
Query: 90 FVEPDDAAEAKRHMDGQVLLGRELTVVFAE 119
+ D+A +A +DG+ + GR + V FA+
Sbjct: 64 YKYADEAQKAIDRLDGRNVDGRNIMVQFAK 93
>gi|226481921|emb|CAX79226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D SL V NL + +D+RR F +FG + DIY+PRD + E RGF F+++ +A
Sbjct: 12 DGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPCTFESRGFAFVRYCTDREADC 71
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R MDG + GRE+ V A+ R P+
Sbjct: 72 AIRGMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|19112519|ref|NP_595727.1| translation initiation factor eIF3g [Schizosaccharomyces pombe
972h-]
gi|6016322|sp|P78795.2|EIF3G_SCHPO RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|3006180|emb|CAA18400.1| translation initiation factor eIF3g [Schizosaccharomyces pombe]
Length = 282
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 8 PSPPPRGSGGGYGRRGRSPSPRGRYGGGRG---------RDLPTSLLVRNLRHDCRPEDI 58
SP + G G +GR +P R G GR RD +L V NL D R E++
Sbjct: 159 ASPVSSRASGALGEKGRYIAPHLRAGSGRESGDSMFKRERDDSATLRVTNLSDDTREEEL 218
Query: 59 RRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDG 105
R F +FG I+ +YL +D +G +GF F+ + + D A +A+ +DG
Sbjct: 219 RDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDG 265
>gi|172035929|ref|YP_001802430.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354556024|ref|ZP_08975322.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171697383|gb|ACB50364.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353552023|gb|EHC21421.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 98
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
++ V NL +D ED+ F ++G +K + LP D +G PRGFGF++ D A
Sbjct: 2 TIYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRPRGFGFVEMESDDQETAAIET 61
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRR 141
+DG +GR++ V N+ KP + R G G FR++
Sbjct: 62 LDGADWMGRQMRV-----NKAKPRENSGR-NGSGSFRKQ 94
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DIY+PRD+ +G+PRGF F+++ D+A +A
Sbjct: 17 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDG 76
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPP 145
+DG GR L V FA + P+ A + RGR +P P
Sbjct: 77 LDGMRFDGRALMVQFA---KYGPN---AEKIHRGRITEENPKP 113
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++PRD +GE RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYSDEAQKAIER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V A+
Sbjct: 77 LDGRAVDGRNIVVQSAK 93
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 30 GRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ 89
GRYG RD SLLV N+ +D+ F++ G + DI +PRD +G+ RGF F++
Sbjct: 5 GRYGPPAVRD-SYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVR 63
Query: 90 FVEPDDAAEAKRHMDGQVLLGRELTVVFAE 119
+ D+A +A +DG+ + GR++ V FA+
Sbjct: 64 YKYEDEAQKAVDKLDGRTVDGRDIMVQFAK 93
>gi|241952837|ref|XP_002419140.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
gi|223642480|emb|CAX42729.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
Length = 846
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 52/79 (65%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L +RN+ ++ ED R+ F Q+GA++++++ D +G+ +GF ++QF + DDA A R +
Sbjct: 313 LFIRNISYEASEEDFRKLFSQYGALEEVHIAIDTRTGKSKGFLYVQFSKKDDATRAYRSL 372
Query: 104 DGQVLLGRELTVVFAEENR 122
D Q+ GR L ++ A++ +
Sbjct: 373 DKQIFQGRLLHILPADQKK 391
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 48 NLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQV 107
NL + +D+ F FG +K + +P+ + RGF F++F +A A ++G
Sbjct: 724 NLPFEATRKDLLELFGAFGQLKSVRVPKKF-DQSARGFAFVEFNLMKEAETAMNQLEGVH 782
Query: 108 LLGRELTVVFAEEN 121
LLGR L + +AE++
Sbjct: 783 LLGRRLVMQYAEQD 796
>gi|391337692|ref|XP_003743199.1| PREDICTED: uncharacterized protein LOC100907227 [Metaseiulus
occidentalis]
Length = 256
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + ED++R F + G + D+Y+PR+ + E RGF F++F + DA EA
Sbjct: 74 VSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVRFFDRRDAEEAMD 133
Query: 102 HMDGQVLLGRELTVVFAE 119
+DG L GREL + A+
Sbjct: 134 ALDGYRLDGRELRIAMAK 151
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQF 90
SL V NL + ED++R F + G + D+Y+PR+ + E RGF F++F
Sbjct: 15 VSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVRF 63
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 30 GRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ 89
GRYG RD SLLV N+ +D+ F++ G + DI +PRD +G+ RGF F++
Sbjct: 5 GRYGPPAVRD-SYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVR 63
Query: 90 FVEPDDAAEAKRHMDGQVLLGRELTVVFAE 119
+ D+A +A +DG+ + GR++ V FA+
Sbjct: 64 YKYEDEAQKAVDKLDGRTVDGRDIMVQFAK 93
>gi|405969990|gb|EKC34930.1| 35 kDa SR repressor protein [Crassostrea gigas]
Length = 208
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 23/116 (19%)
Query: 42 TSLLVRNL----RHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQF------- 90
+SL VRN+ R + E++R F ++G + D+Y+P DYY+ +PRGF ++Q+
Sbjct: 10 SSLYVRNVPSTERAEEMAEELRALFGKYGPLTDVYVPVDYYTRDPRGFAYVQYPLFRLTK 69
Query: 91 --------VEPD----DAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERG 134
V DA +A H+D G EL V FA +RK P+ MR+++RG
Sbjct: 70 SVLLLSSLVHVIDYSRDADDALYHLDRTRFYGMELEVEFARGDRKTPNQMRSKDRG 125
>gi|156402343|ref|XP_001639550.1| predicted protein [Nematostella vectensis]
gi|156226679|gb|EDO47487.1| predicted protein [Nematostella vectensis]
Length = 862
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L +RNL + C EDI+ FE+FG + ++ LP D ++ + G GF+ F+ P+ A +A +
Sbjct: 365 LFLRNLAYSCSEEDIQHLFEKFGPLSEVNLPLDKHTNKTIGIGFVTFLMPEHAVKAFNEL 424
Query: 104 DGQVLLGRELTVVFAEENRKKPSD 127
DG V GR L ++ A+ +++ +D
Sbjct: 425 DGTVFQGRLLHILPAKAKKEESND 448
Score = 44.3 bits (103), Expect = 0.053, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYY-SGEPRGFGFIQFVEPDDAAEAKRH 102
+LVRN+ + ++IR F FG IK + LP+ +G RGF F+ F+ DA A
Sbjct: 763 ILVRNVPFEATTKEIRELFSTFGEIKTLRLPKKMTGTGPHRGFAFVDFLTKQDAKRAFEA 822
Query: 103 M-DGQVLLGRELTVVFAEEN------RKKPSD 127
+ L GR L + +AE+ RK+ +D
Sbjct: 823 LCTSTHLYGRRLVLEWAEDEDDVDTLRKRTAD 854
>gi|330925215|ref|XP_003300959.1| hypothetical protein PTT_12345 [Pyrenophora teres f. teres 0-1]
gi|311324663|gb|EFQ90950.1| hypothetical protein PTT_12345 [Pyrenophora teres f. teres 0-1]
Length = 275
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 20 GRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS 79
GR R P P R R+ ++L V + E++ R FE++G ++ + RD ++
Sbjct: 43 GRDSRGPPPERRNDDDESRNSGSNLFVTGIHPTLSEEEVTRLFEKYGEVEQCNIMRDPHT 102
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
E RGFGF++ V D A AK + G+V GR L++ A
Sbjct: 103 KESRGFGFVKMVTSDQADAAKEGLQGEVHQGRTLSIEKA 141
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 30 GRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ 89
GR G RD SLLV N+ +D+ F+++G + DI++PRD +GE RGF F++
Sbjct: 5 GRSGHPENRD-TFSLLVLNVSFRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFAFVR 63
Query: 90 FVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPR 146
+ D+A +A +DG GR L V FA + P+ A + RGR +P PR
Sbjct: 64 YNYEDEAQDAIDGLDGMRFGGRALMVQFA---KYGPN---AEKIHRGRITEENPKPR 114
>gi|448878425|gb|AGE46175.1| arginine/serine-rich splicing factor SCL33 transcript III
[Physcomitrella patens subsp. patens]
Length = 95
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 34/40 (85%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSG 80
PTSLLVRN+ DC +D+R PFE++G +KD+YLPRDYY+G
Sbjct: 55 PTSLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTG 94
>gi|1749496|dbj|BAA13806.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 129
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 8 PSPPPRGSGGGYGRRGRSPSPRGRYGGGRG---------RDLPTSLLVRNLRHDCRPEDI 58
SP + G G +GR +P R G GR RD +L V NL D R E++
Sbjct: 6 ASPVSSRASGALGEKGRYIAPHLRAGSGRESGDSMFKRERDDSATLRVTNLSDDTREEEL 65
Query: 59 RRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDG 105
R F +FG I+ +YL +D +G +GF F+ + + D A +A+ +DG
Sbjct: 66 RDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDG 112
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++PRD +G+ RGF F ++ D+A +A
Sbjct: 17 SLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFFRYKYADEAQKAVER 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGKNVDGRYIMVQFAK 93
>gi|336257891|ref|XP_003343767.1| hypothetical protein SMAC_04425 [Sordaria macrospora k-hell]
gi|380091605|emb|CCC10737.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 344
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ R FE++G ++ + +D ++GE RGFGF++ V P+ A AK
Sbjct: 74 SNLFVTGIHPRLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMVTPEQAQAAKD 133
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 134 GLQGEVIEGRTLSIEMA 150
>gi|195995613|ref|XP_002107675.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588451|gb|EDV28473.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 330
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T L + L + +R F+Q+G +++ ++ D SG RGFGF+ F +P+DA +A
Sbjct: 14 TRLFIGGLSSEVDNTKLREAFQQYGRLREAFVTVDRMSGRSRGFGFVSFYDPEDAQDAID 73
Query: 102 HMDGQVLLGRELTVVFAEENRKKPS 126
M G+ L GR + V A + + S
Sbjct: 74 QMTGKELCGRSIRVSHAVKQTDRDS 98
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P LL+ L + E + F ++G I ++ L +D + + RGF FI F P DA +
Sbjct: 4 DRPGKLLIGGLSAETTEESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFITFESPADAKD 63
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A + M+G+ L G+ + V E KPS
Sbjct: 64 AAKEMNGKFLDGKTIKV----EQANKPS 87
>gi|119609848|gb|EAW89442.1| splicing factor, arginine/serine-rich 2, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HMDG 105
MDG
Sbjct: 74 AMDG 77
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|15228279|ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical protein; 114721-113936 [Arabidopsis thaliana]
gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis thaliana]
gi|61656137|gb|AAX49371.1| At3g10400 [Arabidopsis thaliana]
gi|332641379|gb|AEE74900.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
Length = 261
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V NL DI F FG + + + +D ++ + RG F+ +V +DAA+A R
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAAR 116
Query: 102 HMDGQVLLGRELTVVFAEEN 121
MD ++L GR+LTV A +N
Sbjct: 117 SMDAKILNGRKLTVSIAADN 136
>gi|302820371|ref|XP_002991853.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
gi|302822709|ref|XP_002993011.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300139211|gb|EFJ05957.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300140391|gb|EFJ07115.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
Length = 101
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++PRD SGE RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFDRYGKVVDIFIPRDRRSGESRGFAFVRYKHVDEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAEENR 122
+DG + GR++ V FA+ R
Sbjct: 77 LDGMTIDGRQIAVQFAKYGR 96
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRDVDGRNIMVQFAK 93
>gi|384252135|gb|EIE25612.1| hypothetical protein COCSUDRAFT_83619, partial [Coccomyxa
subellipsoidea C-169]
Length = 207
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 9/123 (7%)
Query: 21 RRGRSP---SPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDY 77
R GRSP +PRG GR D ++ V NL H+ +R FE++G + + +
Sbjct: 12 RAGRSPDRETPRGGDADGR-EDTAGTIFVGNLNHETSERRLREFFEEYGRVLSTKVVFNP 70
Query: 78 YSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA--EENRKKPSDMRARERGR 135
+G +GFGF++F + DA +A + DGQ + GR + FA + +R +P R GR
Sbjct: 71 ETGRSKGFGFVKFDDARDAEDAIKQADGQTMDGRTIKCNFAKYQPHRGQPHAFRG---GR 127
Query: 136 GRF 138
G F
Sbjct: 128 GDF 130
>gi|340383730|ref|XP_003390369.1| PREDICTED: hypothetical protein LOC100640053 [Amphimedon
queenslandica]
Length = 449
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 24 RSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPR 83
RSP+P+ PT + V L + + F FG +K+I LP D + PR
Sbjct: 304 RSPTPK-----------PTKVFVGKLTRNVTKPHLNEVFSNFGKVKNIDLPLDRLNFLPR 352
Query: 84 GFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
G G+++F PD+A A +HMDG + G+++T+
Sbjct: 353 GHGYVEFDTPDNATAAMKHMDGGWIDGQQVTIQLV 387
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRDVDGRNIMVQFAK 93
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea mays]
Length = 254
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRDVDGRNIMVQFAK 93
>gi|403308741|ref|XP_003944810.1| PREDICTED: uncharacterized protein LOC101031882, partial [Saimiri
boliviensis boliviensis]
Length = 346
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V NL + P+ +RR FE++G + D+Y+PR+ ++ PRGF F++F + DA +A+
Sbjct: 120 ITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQRDAEDAEA 179
Query: 102 HMDGQVL 108
MDG L
Sbjct: 180 AMDGAEL 186
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRDVDGRNIMVQFAK 93
>gi|413933821|gb|AFW68372.1| hypothetical protein ZEAMMB73_804558, partial [Zea mays]
Length = 138
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 38/48 (79%), Gaps = 7/48 (14%)
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARER--GRG-----RFRRRSP 143
MDG++LLGRE+ VVFAEENRKKPSDMRARE+ GRG R R RSP
Sbjct: 1 MDGKMLLGREINVVFAEENRKKPSDMRAREKISGRGCSYDRRLRSRSP 48
>gi|336472231|gb|EGO60391.1| hypothetical protein NEUTE1DRAFT_107026 [Neurospora tetrasperma
FGSC 2508]
gi|350294548|gb|EGZ75633.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 343
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ R FE++G ++ + +D ++GE RGFGF++ + P+ A AK
Sbjct: 74 SNLFVTGIHPRLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMMTPEQANAAKE 133
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 134 GLQGEVIEGRTLSIEMA 150
>gi|16944647|emb|CAC28728.2| conserved hypothetical protein [Neurospora crassa]
Length = 343
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ R FE++G ++ + +D ++GE RGFGF++ + P+ A AK
Sbjct: 74 SNLFVTGIHPRLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMMTPEQANAAKE 133
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 134 GLQGEVIEGRTLSIEMA 150
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea mays]
Length = 256
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRDVDGRNIMVQFAK 93
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea mays]
Length = 264
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRDVDGRNIMVQFAK 93
>gi|297829568|ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
gi|297328506|gb|EFH58925.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V NL DI F FG + + + +D ++ + RG F+ +V +DAA+A R
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAAR 116
Query: 102 HMDGQVLLGRELTVVFAEEN 121
MD ++L GR+LTV A +N
Sbjct: 117 SMDAKILNGRKLTVSIAADN 136
>gi|315044427|ref|XP_003171589.1| RNA recognition domain-containing protein family protein
[Arthroderma gypseum CBS 118893]
gi|311343932|gb|EFR03135.1| RNA recognition domain-containing protein family protein
[Arthroderma gypseum CBS 118893]
Length = 305
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 22 RGRSPSPRGRYGGGRGRDL--------------PTSLLVRNLRHDCRPEDIRRPFEQFGA 67
R RS SP GR G D T+L V + D+ R FE++G
Sbjct: 33 RNRSASPNGRTDRAEGADTRVKNADDEEGAQNTGTNLFVTGIHPRLSEADVTRLFEKYGE 92
Query: 68 IKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
+++ + D ++ E RGFGF+ V PD A A+ + G+V+ GR L++
Sbjct: 93 VENCSIMLDPHTKESRGFGFVNMVTPDQAEAAREGLQGEVIDGRTLSI 140
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRDVDGRNIMVQFAK 93
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea mays]
Length = 270
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRDVDGRNIMVQFAK 93
>gi|359490360|ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
vinifera]
Length = 480
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Query: 43 SLLVRNLR-HDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V N ++ R D+ R F+ +G I +I + R+ F FIQ+ +DA A
Sbjct: 98 TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRN--------FAFIQYESQEDATRALE 149
Query: 102 HMDGQVLLGRELTVVFAEEN-------------RKKPSDMRARERGRGR--FRRRSPPPR 146
+ L+ R ++V +A + R+ S R+ ++GR +RR P
Sbjct: 150 ATNMSKLMDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPD 209
Query: 147 YSR-SPPPRYAR---SPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRG 202
Y R S P Y R SP YGRD SP PRRR+ R++ HG++ S ++D RG
Sbjct: 210 YGRGSSPSAYRRERASPDYGRDPSPSPRRRD--RAIPDHGRSRSPSHHRRERTSHDSARG 267
Query: 203 RSRSPHRGQR 212
SRSP+R +R
Sbjct: 268 PSRSPYRSER 277
>gi|147863191|emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
Length = 479
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Query: 43 SLLVRNLR-HDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V N ++ R D+ R F+ +G I +I + R+ F FIQ+ +DA A
Sbjct: 96 TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRN--------FAFIQYESQEDATRALE 147
Query: 102 HMDGQVLLGRELTVVFAEEN-------------RKKPSDMRARERGRGR--FRRRSPPPR 146
+ L+ R ++V +A + R+ S R+ ++GR +RR P
Sbjct: 148 ATNMSKLMDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPD 207
Query: 147 YSR-SPPPRYAR---SPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRG 202
Y R S P Y R SP YGRD SP PRRR+ R++ HG++ S ++D RG
Sbjct: 208 YGRGSSPSAYRRERASPDYGRDPSPSPRRRD--RAIPDHGRSRSPSHHRRERTSHDSARG 265
Query: 203 RSRSPHRGQR 212
SRSP+R +R
Sbjct: 266 PSRSPYRSER 275
>gi|358331785|dbj|GAA50546.1| serine/arginine-rich splicing factor 2 [Clonorchis sinensis]
Length = 340
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V NL + ED+RR F ++G + D+Y+PRD Y+ E RGF F+++ +A A R
Sbjct: 15 VSLKVDNLAYRTTIEDLRRVFSRYGEVGDVYIPRDPYTFESRGFAFVRYPTDREADSAIR 74
Query: 102 HMDGQVLLGRELTV 115
MDG+ + GRE+ V
Sbjct: 75 EMDGRRIDGREIRV 88
>gi|156054690|ref|XP_001593271.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980]
gi|154703973|gb|EDO03712.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 842
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + +D+R+ FEQ+GA+++I+LP D G +GF +Q+ +P+ AAEA ++
Sbjct: 317 LFVRNLPYSATEDDLRKHFEQYGALEEIHLPVD-AKGASKGFVLVQYTDPNAAAEAYHNV 375
Query: 104 DGQVLLGRELTVVFAEENRKKPSD 127
DG+ GR L ++ A R D
Sbjct: 376 DGEPFQGRLLHILPAAAKRDNKLD 399
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T L+V+NL + DIR+ F +G ++ + +P+ + RGF F F+ +A A
Sbjct: 719 TKLIVKNLPFEASKSDIRKLFGTYGQLRSVRMPKK-FDHSTRGFAFADFITAREAENALE 777
Query: 102 HMDGQVLLGRELTVVFAEE 120
+ LLGR L + FA E
Sbjct: 778 ALKDTHLLGRRLVIDFASE 796
>gi|358253472|dbj|GAA53142.1| serine/arginine-rich splicing factor 10 [Clonorchis sinensis]
Length = 346
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
L +RNL D+ F++FG + ++ +P D + + +G+ F+++ + DDAA A
Sbjct: 41 CLHIRNLPDSITYNDVWLEFKKFGEVVNVTIPMDVNTAKAKGYAFVEYADCDDAARALNE 100
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARER 133
M G +L GR LTV ++ K +M R +
Sbjct: 101 MHGILLWGRILTVQYSRSYPKTSREMALRSQ 131
>gi|325182450|emb|CCA16902.1| polyadenylatebinding protein putative [Albugo laibachii Nc14]
Length = 675
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V+NL + E++R F +G I + RD +G RGFGF+ F P++AA A
Sbjct: 361 VNLYVKNLDDLLQDEELREAFTNYGTITSARVMRDS-TGNSRGFGFVCFSTPEEAATAVA 419
Query: 102 HMDGQVLLGRELTVVFAE--ENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSP 159
M+G+++ G+ + V FA+ E R+ + + +R G R P PP Y
Sbjct: 420 EMNGKLITGKPVYVAFAQRKEVRRAQLEAQHAQRATGVLVNRGMP----MGQPPMYGAPM 475
Query: 160 SYGR 163
Y +
Sbjct: 476 FYAQ 479
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T+ V+NL D+RR FE FG + + +D S RGFGF+ + + D A A
Sbjct: 252 TNCYVKNLPTQWTDADLRREFEPFGQVNSAVVMKDPNSATNRGFGFVNYEDADGAHAAVE 311
Query: 102 HMDGQVLLG 110
+ G+ G
Sbjct: 312 GLSGKTFKG 320
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETTEKALEQFFSKYGRIAEVILMKDRETNKSRGFAFVTFESPSDAKD 64
Query: 99 AKRHMDGQVLLGRELTV------VFAEENRKKPSDMRARERG 134
A R M+G+ L G+ + V F R+ P M +R RG
Sbjct: 65 AAREMNGKSLDGKNIKVEQATKPQFESGGRRGPPPMHSRSRG 106
>gi|154418572|ref|XP_001582304.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121916538|gb|EAY21318.1| hypothetical protein TVAG_166930 [Trichomonas vaginalis G3]
Length = 202
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L VR + H + + R F ++G +KD+Y+P+D+ SG R ++++ + +A++A
Sbjct: 3 TLFVRPINHVSKEFLLSR-FSEYGEVKDLYIPKDFKSGRRRTIAYVKYDDKVEASKAIEG 61
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSP-PPRYSRSPPPRYARSPSY 161
++G+ + G+E+ V ++ E +K P +M A + R R+ +P PP+Y+ Y + +
Sbjct: 62 LNGKEINGKEIYVSWSSEKQKTPDEMEAAKAQRQLERQENPKPPKYTPEEHELYLKKKHF 121
Query: 162 GR 163
Sbjct: 122 AE 123
>gi|428177144|gb|EKX46025.1| hypothetical protein GUITHDRAFT_70912, partial [Guillardia theta
CCMP2712]
Length = 84
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%)
Query: 46 VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDG 105
VRN+ +D+R F ++G +KD+Y+P DYY+ P+ F F++F+ ++A +AK MD
Sbjct: 1 VRNIGDRTDGQDLRELFGRYGTVKDVYIPIDYYTKRPKPFAFVEFINYEEARDAKEDMDR 60
Query: 106 QVLLGRELTVVFAEE 120
+ GR + VVFA++
Sbjct: 61 REFQGRVIDVVFAQQ 75
>gi|301096303|ref|XP_002897249.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
gi|262107334|gb|EEY65386.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
Length = 543
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V N+ +++R F +FG I D+Y+PR S E RGF F++F+E DA +A
Sbjct: 358 TLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFIEKRDAEDAIDG 417
Query: 103 MDGQVLLGRELTVVFAEENR 122
M+GQ GR+L V FA++ R
Sbjct: 418 MEGQEFQGRDLRVQFAKQRR 437
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKD 64
Query: 99 AKRHMDGQVLLGRELTV------VFAEENRKKPSDMRARERG 134
A R M+G+ L G+ + V F R+ P M +R RG
Sbjct: 65 AAREMNGKSLDGKNIKVEQATKPQFESGGRRGPPPMHSRSRG 106
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKD 64
Query: 99 AKRHMDGQVLLGRELTV------VFAEENRKKPSDMRARERG 134
A R M+G+ L G+ + V F R+ P M +R RG
Sbjct: 65 AAREMNGKSLDGKNIKVEQATKPQFESGGRRGPPPMHSRSRG 106
>gi|85099136|ref|XP_960722.1| hypothetical protein NCU04164 [Neurospora crassa OR74A]
gi|28922241|gb|EAA31486.1| predicted protein [Neurospora crassa OR74A]
Length = 396
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ R FE++G ++ + +D ++GE RGFGF++ + P+ A AK
Sbjct: 74 SNLFVTGIHPRLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMMTPEQANAAKE 133
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 134 GLQGEVIEGRTLSIEMA 150
>gi|357017693|gb|AET50875.1| hypothetical protein [Eimeria tenella]
Length = 415
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 75/187 (40%), Gaps = 36/187 (19%)
Query: 36 RGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDD 95
RG D T L + NL C ++RR FE+ G +KD + + S E RGF F+ FV+P
Sbjct: 101 RGGDTDT-LYISNLPLRCGALELRRIFEEVGEVKDCRIVNNPVSRESRGFAFLSFVDPSH 159
Query: 96 AAEAKRHMDGQVLLGRELTVVFAE-ENRKKPSDMRARERGRGRFRRRSPPPRYSRSPP-- 152
AA A H D + + G V E R KP +P P + + PP
Sbjct: 160 AAVAIEHFDNKTIFGDGSRPVRVERAKRNKP---------------HNPTPGFYKGPPGA 204
Query: 153 ---------------PRYARSPSYGRDYSPP-PRRRNYSRSVSPHGQNYSRERSYSRSPA 196
P YA +P R++ PP P +Y H +R +
Sbjct: 205 SIKYDKSGRLKPGFLPYYAVAPGASREFVPPSPFGMDYGSGTRSHSGGRWEDRDWGARGG 264
Query: 197 YDGPRGR 203
YD P GR
Sbjct: 265 YD-PSGR 270
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
Length = 97
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
S+ V NL + +D+ F+++G IK ++LP D +G+ RGF F++ P++ A+A
Sbjct: 1 MSIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAIA 60
Query: 102 HMDGQVLLGRELTVVFAEENRKKPS 126
+DG +GREL V A E KPS
Sbjct: 61 ALDGAQWMGRELKVNQAREREPKPS 85
>gi|326437182|gb|EGD82752.1| hypothetical protein PTSG_03403 [Salpingoeca sp. ATCC 50818]
Length = 1027
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 26 PSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGF 85
P+P G +G D + VRNL + C +DIR FE+FG + ++++P D + +P+G
Sbjct: 489 PAPLGE--DDKGLDETGRIFVRNLAYVCTEDDIRALFEKFGPLSEVHMPLDTQTKKPKGI 546
Query: 86 GFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSD 127
F+ F+ P++A +A +D V GR L ++ A R + SD
Sbjct: 547 AFVTFLHPENAVKAFTQLDASVFKGRLLHLLPA---RTRDSD 585
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYL-PRDYYS 79
R + P R G + T ++VRN+ + +DIR+ F +G +K + L P+ +
Sbjct: 889 RTQQQQGPVARREGKLIKGATTKVVVRNVAFEATKKDIRQLFTPYGDVKSVRLPPKSFDP 948
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQV-LLGRELTVVFAEENRKKPSDMRARERGRGRF 138
+ RGF F++F ++A A + G L GR L + FA+++ +R++ R R
Sbjct: 949 TQHRGFAFVEFSSKEEAKSAFEALSGSTHLYGRRLNLEFAKDD-NSVEKLRSKARTAKRA 1007
Query: 139 RRRSPPPR 146
P +
Sbjct: 1008 TADQPSKK 1015
>gi|41323931|gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
Length = 478
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Query: 43 SLLVRNLR-HDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V N ++ R D+ R F+ +G I +I + R+ F FIQ+ +DA A
Sbjct: 96 TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRN--------FAFIQYESQEDATRALE 147
Query: 102 HMDGQVLLGRELTVVFAEEN-------------RKKPSDMRARERGRGR--FRRRSPPPR 146
+ L+ R ++V +A + R+ S R+ ++GR +RR P
Sbjct: 148 ATNMSKLMDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPD 207
Query: 147 YSR-SPPPRYAR---SPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRG 202
Y R S P Y R SP YGRD SP PRRR+ R++ HG++ S ++D RG
Sbjct: 208 YGRGSSPSAYRRERASPDYGRDPSPSPRRRD--RAMPDHGRSRSPSHHRRERTSHDSARG 265
Query: 203 RSRSPHRGQR 212
SRSP+R +R
Sbjct: 266 PSRSPYRSER 275
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea mays]
Length = 274
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRDVDGRNIMVQFAK 93
>gi|451997220|gb|EMD89685.1| hypothetical protein COCHEDRAFT_1177492 [Cochliobolus
heterostrophus C5]
Length = 276
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 20 GRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS 79
GR R P P R R+ ++L V + +++ R FE++G ++ + RD ++
Sbjct: 43 GRDSRGPPPERRNDDDESRNSGSNLFVTGIHPTLTEDEVTRLFEKYGDVEQCNIMRDPHT 102
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
E RGFGF++ V + A AK + G+V GR L++ A
Sbjct: 103 KESRGFGFVKMVTAEQADNAKEGLQGEVHQGRTLSIEKA 141
>gi|384254118|gb|EIE27592.1| translation initiation factor 3, RNA-binding subunit [Coccomyxa
subellipsoidea C-169]
Length = 285
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 42/76 (55%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S+ V NL D R +D+R F FG I IY+ D +GE RGF F+ FV +DAA A +
Sbjct: 203 SVRVTNLSEDTREDDLRELFSPFGPISRIYIAYDRETGESRGFAFVNFVHREDAARAVQK 262
Query: 103 MDGQVLLGRELTVVFA 118
+DG L V FA
Sbjct: 263 LDGHGYDNLILRVEFA 278
>gi|255084425|ref|XP_002508787.1| predicted protein [Micromonas sp. RCC299]
gi|226524064|gb|ACO70045.1| predicted protein [Micromonas sp. RCC299]
Length = 248
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SL + NL + E ++ F + G I D+Y+PRDYY+ RGF F++F + A +A +
Sbjct: 32 SLKLDNLDYSVTLEQLKELFGKHGEIGDVYMPRDYYTKRSRGFAFVRFKDRTAAEDAIKE 91
Query: 103 MDGQVLLGRELTVVFAEE 120
D + L GR + FAE+
Sbjct: 92 FDQKELNGRPIACRFAEK 109
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + DI++PRD +GE RGF F+++ D+A +A
Sbjct: 17 SLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIER 76
Query: 103 MDGQVLLGRELTV 115
+DG+ + GR + V
Sbjct: 77 LDGRTVDGRNIVV 89
>gi|451852456|gb|EMD65751.1| hypothetical protein COCSADRAFT_170220 [Cochliobolus sativus
ND90Pr]
Length = 276
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 20 GRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS 79
GR R P P R R+ ++L V + +++ R FE++G ++ + RD ++
Sbjct: 43 GRDSRGPPPERRNDDDESRNSGSNLFVTGIHPTLTEDEVTRLFEKYGDVEQCNIMRDPHT 102
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
E RGFGF++ V + A AK + G+V GR L++ A
Sbjct: 103 KESRGFGFVKMVTAEQADNAKEGLQGEVHQGRTLSIEKA 141
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 31/188 (16%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T L V +L R D+ F ++G ++D+ + RDY F++F +P DA +A+
Sbjct: 11 TRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRDY--------AFVEFSDPRDADDARH 62
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPP----RYSRSPPPRYAR 157
++DG+ G + V FA + RG + R PPP ++ +AR
Sbjct: 63 YLDGKEFDGSRIIVEFA----------KGVPRGSREYLGRGPPPGSGRCFNCGIDGHWAR 112
Query: 158 SPSYGRDYSPPPR---RRNYSRSVSPHGQNYSRERSYSRSPAYDGPRGRSRSPHRGQRQS 214
G + R R + R+ + +R +SYSRSP GRSRSPHRG+ +S
Sbjct: 113 DCKAGDWKNKCYRCGERGHIERNCKNSPKKLTRGKSYSRSP------GRSRSPHRGRSRS 166
Query: 215 WSPSRSRT 222
S SR R+
Sbjct: 167 PSYSRGRS 174
>gi|413944557|gb|AFW77206.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 330
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 50/216 (23%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T L V + R +D+ F ++G ++++ + R+ FGF++F +P DA +A+
Sbjct: 90 TKLYVGQISPYTRTQDLEDIFRKYGRLRNVDMKRE--------FGFVEFTDPRDADDARH 141
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDM---------------------RARERGRGRFRR 140
+DG++ G L V FA ++ P + R+ G +R
Sbjct: 142 DLDGRIFDGSHLIVEFARGAQRGPGGVPLDGKGPSFPGRCYNCGMDGHWVRDCKAGDWRD 201
Query: 141 RS-------PPPRYSRSPPPRYARSPSYGRDYSP---PPRRRNYSRSVSPHGQNYSRERS 190
+ R ++ R SY R SP R R+YSRS+SP+ R RS
Sbjct: 202 KCFRCGELGHIERNCKNSSKDLKRGRSYLRSASPHHGKGRGRSYSRSLSPY-LGRGRGRS 260
Query: 191 YSRSPAYDGPRGRSRSPHRGQRQSWSPSRSRTPKRN 226
YSRSP++ RGR SWS SRS +P+ N
Sbjct: 261 YSRSPSHYHRRGR----------SWSYSRSHSPRNN 286
>gi|384250305|gb|EIE23785.1| hypothetical protein COCSUDRAFT_66096 [Coccomyxa subellipsoidea
C-169]
Length = 406
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
+ T L V +L + + I+ F FGAIK + L D PRGF ++++ + D+A +A
Sbjct: 126 VTTRLHVGHLTRNVTEDHIKEIFSTFGAIKSVELSVDKVVNLPRGFAYVEYKDRDEAEKA 185
Query: 100 KRHMDGQVLLGRELTVVFAEENRKK 124
+ HMDG L G L+V F RK+
Sbjct: 186 RVHMDGGQLDGNVLSVQFVLVPRKR 210
>gi|296411493|ref|XP_002835465.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629249|emb|CAZ79622.1| unnamed protein product [Tuber melanosporum]
Length = 289
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%)
Query: 20 GRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS 79
G++G S G G + RD +L V N+ D+R FE+FG + ++L +D +
Sbjct: 188 GKKGAGESMSGTGGSYKDRDDLATLRVTNVSEFAEESDLREMFERFGRVTRVFLAKDRDT 247
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDG 105
G +GF FI +V+ DAA+A MDG
Sbjct: 248 GRAKGFAFISYVDRSDAAKACERMDG 273
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V N+ +++R F +FG I D+Y+PR S E RGF F++F+E DA +A
Sbjct: 8 TLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFMEKRDAEDAIEG 67
Query: 103 MDGQVLLGRELTVVFAEENR 122
M+GQ GR+L V FA++ R
Sbjct: 68 MEGQEFQGRDLRVQFAKQRR 87
>gi|241627928|ref|XP_002408123.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215501127|gb|EEC10621.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 105
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 64 QFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRK 123
++G I D+Y+P DYY+ PRGF ++QF + DA +A +D GREL + FA+ +RK
Sbjct: 1 KYGPITDVYIPVDYYARRPRGFAYVQFEDLRDAEDAMYSLDWTRFYGRELEIEFAQGDRK 60
Query: 124 KP 125
P
Sbjct: 61 TP 62
>gi|62733241|gb|AAX95358.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 384
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 81 EPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSDMR 129
EPRGF F++F DA++A+ HM+ ++L GRE++V FA + RK+P +MR
Sbjct: 1 EPRGFAFVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMR 49
>gi|432113367|gb|ELK35779.1| Serine/arginine-rich splicing factor 2 [Myotis davidii]
Length = 218
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ +RR FE++G + D+Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 102 HM 103
M
Sbjct: 74 AM 75
>gi|189202528|ref|XP_001937600.1| alternative splicing regulator [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984699|gb|EDU50187.1| alternative splicing regulator [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 289
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 20 GRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS 79
GR R P P R R+ ++L V + +++ R FE++G ++ + RD ++
Sbjct: 43 GRDSRGPPPERRNDDDESRNSGSNLFVTGIHPTLSEDEVTRLFEKYGEVEQCNIMRDPHT 102
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
E RGFGF++ V + A AK + G+V GR L++ A
Sbjct: 103 KESRGFGFVKMVTSEQADAAKEGLQGEVHQGRTLSIEKA 141
>gi|327297170|ref|XP_003233279.1| hypothetical protein TERG_06272 [Trichophyton rubrum CBS 118892]
gi|326464585|gb|EGD90038.1| hypothetical protein TERG_06272 [Trichophyton rubrum CBS 118892]
Length = 301
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 22 RGRSPSPRGRYGGGRGRDL--------------PTSLLVRNLRHDCRPEDIRRPFEQFGA 67
R RS SP GR G D T+L V + D+ R FE++G
Sbjct: 33 RNRSASPNGRTDRAEGTDTRMKNADDEEGAQNTGTNLFVTGIHPRLSEADVTRLFEKYGE 92
Query: 68 IKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
+++ + D ++ E RGFGF+ PD A A+ + G+V+ GR L++ A
Sbjct: 93 VENCSIMLDPHTKESRGFGFVNMATPDQAEAAREGLQGEVIDGRTLSIEKA 143
>gi|167384180|ref|XP_001736837.1| ribonucleoprotein, chloroplast [Entamoeba dispar SAW760]
gi|165900615|gb|EDR26908.1| ribonucleoprotein, chloroplast, putative [Entamoeba dispar SAW760]
Length = 320
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 16/161 (9%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L V NL + + +++ FE+FG + D+ + + Y G +GFG+++F + A +A R
Sbjct: 5 LFVGNLEYQIKNFELKDFFERFGKVVDVVIMKKY-DGSSKGFGYVEFDTEESAQKALREG 63
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYGR 163
+ ++L GR + V A E ++ R+R R R + R+ P R S+ R
Sbjct: 64 NNEMLRGRNIRVDIATERKQHGHKERSRSRERNQHTFRTDVPFLFR---------DSFSR 114
Query: 164 DYSPPPRRR-NYSRSVSPH---GQNYSRERS--YSRSPAYD 198
P RR +YSRS P+ QN+ +ER Y YD
Sbjct: 115 LKDLPIRRDFDYSRSYEPYSKESQNFDKERKQIYFSDQKYD 155
>gi|407920811|gb|EKG13991.1| hypothetical protein MPH_08865 [Macrophomina phaseolina MS6]
Length = 286
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + E++ R FE++G ++ + RD ++ E RGFGF++ V P+ A AK
Sbjct: 72 SNLFVTGIHPRLSEEEVTRLFEKYGDVEKCNIMRDPHTKESRGFGFVKMVTPEQADAAKE 131
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 132 GLQGEVIEGRTLSIEKA 148
>gi|326475615|gb|EGD99624.1| hypothetical protein TESG_06970 [Trichophyton tonsurans CBS 112818]
gi|326483761|gb|EGE07771.1| transformer-SR ribonucleoprotein [Trichophyton equinum CBS 127.97]
Length = 304
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 22 RGRSPSPRGRYGGGRGRD--------------LPTSLLVRNLRHDCRPEDIRRPFEQFGA 67
R RS SP GR G D T+L V + D+ R FE++G
Sbjct: 32 RNRSASPNGRTDRAEGTDARMKNADDEEGAQNTGTNLFVTGIHPRLSEADVTRLFEKYGE 91
Query: 68 IKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
+++ + D ++ E RGFGF+ PD A A+ + G+V+ GR L++ A
Sbjct: 92 VENCSIMLDPHTKESRGFGFVNMATPDQAEAAREGLQGEVIDGRTLSIEKA 142
>gi|413920160|gb|AFW60092.1| hypothetical protein ZEAMMB73_401962 [Zea mays]
Length = 83
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 10 PPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIK 69
PP RG GG RGRSP PR YGGGRG SLLVRN+ CRPE++R PFE+FG ++
Sbjct: 17 PPERGHGG----RGRSPPPRRGYGGGRGDHGSVSLLVRNIPLRCRPEELRVPFERFGPVR 72
Query: 70 DIYLPRDYYSG 80
D+YLPRDY++G
Sbjct: 73 DVYLPRDYHTG 83
>gi|427417097|ref|ZP_18907280.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425759810|gb|EKV00663.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 91
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S+ V NL +D EDI F ++G ++ ++LP D +G PRGF F++ D+ A
Sbjct: 2 SIYVGNLSYDATQEDINAVFAEYGTVQRVHLPTDRETGRPRGFAFVEMSSEDEETSAIEA 61
Query: 103 MDGQVLLGRELTV 115
+DG +GR+L V
Sbjct: 62 LDGAEWMGRDLRV 74
>gi|393909058|gb|EJD75300.1| hypothetical protein LOAG_17528 [Loa loa]
Length = 296
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAE 98
LP L VRNL + E + F +G ++ LP D ++ RG+G+++F +P+DA +
Sbjct: 153 LPRRLCVRNLSRNVTKEHLSEIFSVYGTLRTCELPMDRQHTHLGRGYGYVEFEQPEDAEK 212
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A +HMDG + G+E+T
Sbjct: 213 ALKHMDGGQIDGQEVTCELT 232
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE+ G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|443319940|ref|ZP_21049081.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442790348|gb|ELR99940.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 98
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
S+ V NL ++ E+++ FE +G +K +YLP D +G+ RGFGF++ + A
Sbjct: 1 MSIYVGNLSYNVTQEELKEVFEDYGKVKRVYLPTDPETGKLRGFGFVEMETDEQEDAAIE 60
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSP 143
+DG +GRE+ V N+ KP + R G G + R P
Sbjct: 61 TLDGAEWMGREMRV-----NKAKPRENRGDSGGGGNRKIRRP 97
>gi|221129434|ref|XP_002154673.1| PREDICTED: uncharacterized protein LOC100214307 [Hydra
magnipapillata]
Length = 517
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
P L V NL + + I F +G ++ I LP D + PRG +++F + DDA +A
Sbjct: 345 PVKLCVSNLTRNVNKDHILEIFSVYGRVRSIDLPLDTKNYLPRGHAYVEFDKTDDAKDAI 404
Query: 101 RHMDGQVLLGRELT 114
+HMDG + G+E+T
Sbjct: 405 KHMDGGWIDGQEVT 418
>gi|402593268|gb|EJW87195.1| hypothetical protein WUBG_01897 [Wuchereria bancrofti]
Length = 296
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEAKRH 102
L VRNL + E + F +GA++ LP D ++ RG+G+++F +P+DA +A +H
Sbjct: 157 LCVRNLSRNVTKEHLSEIFSVYGALRSCELPMDRQHTHLGRGYGYVEFEQPEDAEKALKH 216
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPP 152
MDG + G+E+T R + R RFR S PR RSPP
Sbjct: 217 MDGGQIDGQEVTCELTHPPRSTLNGSGRRPLSPLRFRGLS--PRRYRSPP 264
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE+ G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|170595296|ref|XP_001902324.1| Rnp [Brugia malayi]
gi|158590065|gb|EDP28832.1| Rnp, putative [Brugia malayi]
Length = 296
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEAKRH 102
L VRNL + E + F +GA++ LP D ++ RG+G+++F +P+DA +A +H
Sbjct: 157 LCVRNLSRNVTKEHLSEIFSVYGALRSCELPMDRQHTHLGRGYGYVEFEQPEDAEKALKH 216
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPP 152
MDG + G+E+T R + R RFR S PR RSPP
Sbjct: 217 MDGGQIDGQEVTCELTHPPRSTLNGSGRRPLSPLRFRGLS--PRRYRSPP 264
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE+ G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|42571257|ref|NP_973702.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330255635|gb|AEC10729.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 224
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 88/203 (43%), Gaps = 32/203 (15%)
Query: 18 GYGRRGRSPSPRGRYGGGRGR---------DLPT-SLLVRNLR-HDCRPEDIRRPFEQFG 66
GYGRR S + G RG+ PT +L V N R D+ R FE +G
Sbjct: 35 GYGRRKLSVEWAKDFQGERGKPRDGKAVSNQRPTKTLFVINFDPIRTRERDMERHFEPYG 94
Query: 67 AIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPS 126
+ ++ + R+ F F+QF +DA +A LL + ++V +A +
Sbjct: 95 KVLNVRMRRN--------FAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGERE 146
Query: 127 DMRARERGRGRFRRRSPPPRYSRSPPPRYAR--SPSYGRDYSPPPRRRNYSRSVSPHGQN 184
D A G RRRSP P Y R P P Y R SP Y R P P R S +
Sbjct: 147 DRYA-----GSRRRRSPSPVYRRRPSPDYTRRRSPEYDRYKGPAPYERRKSPDYGRRSSD 201
Query: 185 YSRERSYSRSPAYDGPRGRSRSP 207
Y R R +RSP YD RSRSP
Sbjct: 202 YGRAR--ARSPGYD----RSRSP 218
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea mays]
Length = 248
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE+ G + D+++PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFA 118
+DG+ + GR + V FA
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|432877561|ref|XP_004073160.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Oryzias latipes]
Length = 380
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRS 150
A R M+G+ L G+ + V E KP A RG PP YSRS
Sbjct: 65 AAREMNGKSLDGKPIKV----EQATKPQFESAGRRG--------PPSNYSRS 104
>gi|403343546|gb|EJY71107.1| RNA binding protein, putative [Oxytricha trifallax]
Length = 388
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+SL V NL + D+R FE++G I+ + D + E RGF F+ + P DA ++
Sbjct: 108 SSLYVANLSKRVKDSDLRDLFERYGTIQKCTVVVDPITSESRGFAFVVYDNPQDAEDSLS 167
Query: 102 HMDGQVLLGRELTV 115
++G LLG+E+ V
Sbjct: 168 KLNGYDLLGKEIRV 181
>gi|15226019|ref|NP_182184.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4415941|gb|AAD20171.1| putative arginine/serine-rich splicing factor [Arabidopsis
thaliana]
gi|17529006|gb|AAL38713.1| putative arginine/serine-rich splicing factor [Arabidopsis
thaliana]
gi|24030496|gb|AAN41395.1| putative arginine/serine-rich splicing factor [Arabidopsis
thaliana]
gi|222423842|dbj|BAH19886.1| AT2G46610 [Arabidopsis thaliana]
gi|330255634|gb|AEC10728.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 250
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 88/203 (43%), Gaps = 32/203 (15%)
Query: 18 GYGRRGRSPSPRGRYGGGRGR---------DLPT-SLLVRNLR-HDCRPEDIRRPFEQFG 66
GYGRR S + G RG+ PT +L V N R D+ R FE +G
Sbjct: 61 GYGRRKLSVEWAKDFQGERGKPRDGKAVSNQRPTKTLFVINFDPIRTRERDMERHFEPYG 120
Query: 67 AIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPS 126
+ ++ + R+ F F+QF +DA +A LL + ++V +A +
Sbjct: 121 KVLNVRMRRN--------FAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGERE 172
Query: 127 DMRARERGRGRFRRRSPPPRYSRSPPPRYAR--SPSYGRDYSPPPRRRNYSRSVSPHGQN 184
D A G RRRSP P Y R P P Y R SP Y R P P R S +
Sbjct: 173 DRYA-----GSRRRRSPSPVYRRRPSPDYTRRRSPEYDRYKGPAPYERRKSPDYGRRSSD 227
Query: 185 YSRERSYSRSPAYDGPRGRSRSP 207
Y R R +RSP YD RSRSP
Sbjct: 228 YGRAR--ARSPGYD----RSRSP 244
>gi|432877559|ref|XP_004073159.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Oryzias latipes]
Length = 386
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRS 150
A R M+G+ L G+ + V E KP A RG PP YSRS
Sbjct: 65 AAREMNGKSLDGKPIKV----EQATKPQFESAGRRG--------PPSNYSRS 104
>gi|367010890|ref|XP_003679946.1| hypothetical protein TDEL_0B06060 [Torulaspora delbrueckii]
gi|359747604|emb|CCE90735.1| hypothetical protein TDEL_0B06060 [Torulaspora delbrueckii]
Length = 345
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 49/184 (26%)
Query: 18 GYGRRGRSPSPRGRYGGGRGRDLPT------------SLLVRNLRHDCRPEDIRRPFEQF 65
GYGR RG YG RDL + S+ + NL +DC PED++ F +
Sbjct: 16 GYGR------SRGDYGPVLSRDLDSTYDEKVNRNYANSIFIGNLTYDCTPEDLKDHFSEV 69
Query: 66 GAI--KDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRK 123
G + DI R G RG G ++F DD EA R D + R++ V
Sbjct: 70 GEVVRADIITSR----GHHRGMGTVEFTNSDDVDEAIRRYDSSYFMDRQVFV-------- 117
Query: 124 KPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYGRDYSPPPRRRNYSRSVS--PH 181
R+ +PPP +R PPR AR RD P + Y V+ P+
Sbjct: 118 ---------------RQDNPPPESARERPPREARERVKARDQYPQHQYPAYEVFVANLPY 162
Query: 182 GQNY 185
N+
Sbjct: 163 SINW 166
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + D+++PRD +G+ RGF F+++ ++A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ F+++G + D+++PRD +G+ RGF F+++ ++A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRNVDGRNIMVQFAK 93
>gi|320163510|gb|EFW40409.1| Snrp70 protein [Capsaspora owczarzaki ATCC 30864]
Length = 320
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L + NL +D E ++R E++G+IK I++ R+ + +PRG+ F++F D +A +
Sbjct: 105 TLFISNLSYDTTEESLKREMEEYGSIKQIHIVRNTQTSKPRGYAFVEFEHERDMKDAYKQ 164
Query: 103 MDGQVLLGRELTVVF 117
DG+ + GR + V F
Sbjct: 165 ADGRKVDGRRIVVDF 179
>gi|300122958|emb|CBK23965.2| unnamed protein product [Blastocystis hominis]
Length = 173
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S+ + NL +D ED+ FE++G I DIY+PR+ + G RGFGF+++V D EA++
Sbjct: 15 SVRIDNLPNDATKEDLNNHFEKYGKIADIYIPRNTHDGGNRGFGFVRYVNED---EARKA 71
Query: 103 MD--GQVLLGRELTVVFAE 119
+D G+ L G+ + V A+
Sbjct: 72 LDENGEELNGQTMRVSMAD 90
>gi|440135805|gb|AGB85016.1| arginine/serine-rich 45 protein [Nicotiana tabacum]
Length = 413
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 13 RGSGGGYGRRGRSPSPRGRYGGGRGRDL-PT----SLLVRNLRHDCRPEDIRRPFEQFGA 67
R S G +RGRSP P + R + PT L V L + ++ F FG
Sbjct: 67 RKSPAGVSKRGRSPLPLSKKASPPPRKVSPTPESRVLHVDQLSRNVNENHLKEIFGNFGE 126
Query: 68 IKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKK 124
I + L D+ P+GF +++F DA +A+ HMDG + G+ + F RKK
Sbjct: 127 ILHVQLVIDHVVNLPKGFAYVEFKTRIDAEKAQLHMDGAQIDGKIVHAKFTLPERKK 183
>gi|170031159|ref|XP_001843454.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869230|gb|EDS32613.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 323
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
PT + V L + + I F +G I+ + P D + RGF ++ FV PD A A
Sbjct: 174 PTRIHVGRLTRNVVKDHILEIFGTYGEIRSVDFPVDRFQSFTRGFCYVDFVNPDGAENAI 233
Query: 101 RHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRY 155
+HMDG + G+E+T +++P RR SP R +R PP R+
Sbjct: 234 KHMDGGQVDGQEITASAILVQKQRPP-----------MRRPSPIMRNNRPPPGRW 277
>gi|193620317|ref|XP_001945375.1| PREDICTED: hypothetical protein LOC100159253 isoform 1
[Acyrthosiphon pisum]
gi|328716903|ref|XP_003246070.1| PREDICTED: hypothetical protein LOC100159253 isoform 2
[Acyrthosiphon pisum]
Length = 317
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 13/96 (13%)
Query: 21 RRGRSPSPR-GRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS 79
++ RSP+P+ R GR L RN+ E I+ F FG IK++ +P D ++
Sbjct: 150 KKERSPTPKPCRIHVGR--------LTRNITK----EHIQEIFSDFGTIKEVDVPLDRFN 197
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
+GF +I++ P++A A +HMDG + G+E+T
Sbjct: 198 KLCKGFSYIEYSSPEEAENAMKHMDGGQIDGQEITC 233
>gi|15292733|gb|AAK92735.1| putative transformer-SR ribonucleoprotein [Arabidopsis thaliana]
Length = 352
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 37/74 (50%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V L H D+ F + G + D++L D ++ E RGFGFI DA R
Sbjct: 45 NSLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIR 104
Query: 102 HMDGQVLLGRELTV 115
+D VL GR +TV
Sbjct: 105 SLDHSVLQGRVITV 118
>gi|347834979|emb|CCD49551.1| hypothetical protein [Botryotinia fuckeliana]
Length = 308
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + E++ R FE++G ++ + RD ++ E RGFGF++ + D A AK
Sbjct: 79 SNLFVTGIHPRLLEEEVSRLFEKYGDVEKCQIMRDPHTRESRGFGFVKMITSDQADAAKE 138
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 139 GLQGEVIEGRTLSIEKA 155
>gi|156052172|ref|XP_001592047.1| hypothetical protein SS1G_07495 [Sclerotinia sclerotiorum 1980]
gi|154705271|gb|EDO05010.1| hypothetical protein SS1G_07495 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 313
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + E++ R FE++G ++ + RD ++ E RGFGF++ + D A AK
Sbjct: 79 SNLFVTGIHPRLLEEEVSRLFEKYGDVEKCQIMRDPHTRESRGFGFVKMITSDQADAAKE 138
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 139 GLQGEVIEGRTLSIEKA 155
>gi|4104336|gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii]
Length = 394
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L V L + + + F ++G I ++ L +D + + RGF FI F P DA +
Sbjct: 5 DRPGKLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G++L G+ + V E KP+
Sbjct: 65 AARDMNGKLLDGKSIKV----EQATKPT 88
>gi|154312862|ref|XP_001555758.1| hypothetical protein BC1G_05132 [Botryotinia fuckeliana B05.10]
Length = 315
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + E++ R FE++G ++ + RD ++ E RGFGF++ + D A AK
Sbjct: 79 SNLFVTGIHPRLLEEEVSRLFEKYGDVEKCQIMRDPHTRESRGFGFVKMITSDQADAAKE 138
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 139 GLQGEVIEGRTLSIEKA 155
>gi|395546030|ref|XP_003774897.1| PREDICTED: RNA-binding motif protein, X chromosome [Sarcophilus
harrisii]
Length = 413
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L V L + + + F ++G I ++ L +D + + RGF FI F P DA +
Sbjct: 24 DRPGKLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKD 83
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G++L G+ + V A +
Sbjct: 84 AARDMNGKLLDGKSIKVEQATK 105
>gi|452983642|gb|EME83400.1| hypothetical protein MYCFIDRAFT_164576, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 833
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL +D + +D+ FE FG ++++++P D SG +GF +IQ+ +PD A A
Sbjct: 314 LFVRNLPYDVQRDDLEAEFEPFGNLEEVHIPLDKKSGSAKGFAYIQYSDPDSAERALVDR 373
Query: 104 DGQVLLGRELTVV--FAEENRK 123
DGQ GR + ++ FA++ K
Sbjct: 374 DGQTFQGRLIHIIPAFAKKESK 395
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T L+++NL + +D+R +G ++ + +P+ RGFGF +F +A A
Sbjct: 712 TKLVIKNLPFEASKKDVRALLGAYGQLRSVRVPKKM-DRAARGFGFAEFTTIKEAQSAME 770
Query: 102 HMDGQVLLGRELTVVF 117
+ LLGR L + F
Sbjct: 771 ALRDTHLLGRRLVIDF 786
>gi|393911729|gb|EFO27260.2| RNA recognition domain-containing protein domain-containing protein
[Loa loa]
Length = 267
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 26 PSPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRG 84
P R RY GR P S L V + + D++R F ++G I+ + L D YSG RG
Sbjct: 142 PIRRSRYNDGRDNPEPCSCLGVFGMSLNTTERDLKRIFGEYGEIESVQLVYDRYSGRSRG 201
Query: 85 FGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
FGF+ F +A AK H+ V+ G + V F+
Sbjct: 202 FGFVYFETTKEAIRAKDHLRDAVIDGMRVRVDFS 235
>gi|42561780|ref|NP_563787.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|28973767|gb|AAO64199.1| putative transformer-SR ribonucleoprotein [Arabidopsis thaliana]
gi|332189991|gb|AEE28112.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 382
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 37/74 (50%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V L H D+ F + G + D++L D ++ E RGFGFI DA R
Sbjct: 75 NSLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIR 134
Query: 102 HMDGQVLLGRELTV 115
+D VL GR +TV
Sbjct: 135 SLDHSVLQGRVITV 148
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 15 SGGGYGRRGRSPSPRGRYGGGRGRDLPT---SLLVRNLRHDCRPEDIRRPFEQFGAIKDI 71
S G G R RS SP D+ +L V NL H E++R+ FE+FG ++
Sbjct: 45 SSGNEGER-RSTSPSSNQMASEHGDIANPGNNLYVANLAHRVTDEELRQLFEKFGRLEKC 103
Query: 72 YLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAE 119
+ D S E RGF F+ F + DA++A + ++G+ + GR + V A+
Sbjct: 104 EIIIDPISRESRGFAFVTFEDVRDASDAVQELNGKDIQGRRMRVEHAK 151
>gi|170582754|ref|XP_001896271.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158596556|gb|EDP34884.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 267
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 26 PSPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRG 84
P R RY GR P S L V + + D++R F ++G I+ + L D YSG RG
Sbjct: 142 PIRRSRYNDGRDNPEPCSCLGVFGMSLNTTERDLKRIFGEYGEIESVQLVYDRYSGRSRG 201
Query: 85 FGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
FGF+ F +A AK H+ V+ G + V F+
Sbjct: 202 FGFVYFETTKEAIRAKDHLRDAVIDGMRVRVDFS 235
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF FI F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKGLESVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKSIKV----EQATKPS 88
>gi|340383281|ref|XP_003390146.1| PREDICTED: hypothetical protein LOC100639457 [Amphimedon
queenslandica]
Length = 640
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L+V L D P +++ F D+YLP+D +GE RGFGFI+F + D A +A +
Sbjct: 514 STLMVFGLNKDTEPFELQNVFTDSN---DVYLPKDRETGEKRGFGFIRFDDIDTATKALK 570
Query: 102 HMDGQVLLGRELTVVFAEE 120
+G + G+ + + +AE+
Sbjct: 571 QHNGITIDGQTIELRYAED 589
>gi|414868574|tpg|DAA47131.1| TPA: hypothetical protein ZEAMMB73_186752, partial [Zea mays]
Length = 169
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEP 82
SLLVRN+ R ED+R PFE+FG ++D+Y+P+DYYSG P
Sbjct: 111 SLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGIP 150
>gi|378733184|gb|EHY59643.1| hypothetical protein HMPREF1120_07628 [Exophiala dermatitidis
NIH/UT8656]
Length = 296
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T+L V + D+ R FE++G ++ + D ++ E RGFGF++ V P+ A A+
Sbjct: 68 TNLFVTGIHPRLTEADVTRLFEKYGEVESCSIMLDPHTKESRGFGFVKMVTPEQAEAARE 127
Query: 102 HMDGQVLLGRELTV 115
+ G+V+ GR L++
Sbjct: 128 GLQGEVIEGRTLSI 141
>gi|354477196|ref|XP_003500808.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Cricetulus griseus]
gi|344244124|gb|EGW00228.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 388
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I +I L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|126325323|ref|XP_001367196.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Monodelphis domestica]
Length = 388
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L V L + + + F ++G I ++ L +D + + RGF FI F P DA +
Sbjct: 5 DRPGKLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETRKSRGFAFITFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G++L G+ + V A +
Sbjct: 65 AARDMNGKLLDGKSIKVEQATK 86
>gi|83699420|ref|NP_033059.2| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|355390287|ref|NP_001239018.1| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|81916088|sp|Q91VM5.1|RMXL1_MOUSE RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
AltName: Full=RNA binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
gi|15030328|gb|AAH11441.1| Rbmxrt protein [Mus musculus]
gi|26334797|dbj|BAC31099.1| unnamed protein product [Mus musculus]
gi|58476937|gb|AAH89350.1| RNA binding motif protein, X chromosome retrogene [Mus musculus]
Length = 388
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I +I L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|396467513|ref|XP_003837957.1| hypothetical protein LEMA_P120040.1 [Leptosphaeria maculans JN3]
gi|312214522|emb|CBX94513.1| hypothetical protein LEMA_P120040.1 [Leptosphaeria maculans JN3]
Length = 1476
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%)
Query: 20 GRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS 79
R R P P R R+ ++L V + E++ R FE++G ++ + RD ++
Sbjct: 1225 NRDSRGPPPERRDDDDESRNSGSNLFVTGIHPSLTEEEVTRLFEKYGEVEQCNIMRDPHT 1284
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
E RGFGF++ V D A AK + G+V GR L++
Sbjct: 1285 KESRGFGFVKMVTSDQADAAKEGLQGEVHQGRTLSI 1320
>gi|148678911|gb|EDL10858.1| mCG7984 [Mus musculus]
Length = 388
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I +I L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|392868156|gb|EJB11446.1| transformer-SR ribonucleoprotein, variant [Coccidioides immitis RS]
Length = 288
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T+L V + D+ R FE++G +++ + D ++ E RGFGF+ D A AK
Sbjct: 66 TNLFVTGIHPRLTEADVSRLFEKYGDVQNCSIMLDPHTKESRGFGFVNMATSDQAEAAKE 125
Query: 102 HMDGQVLLGRELTVVFAEENR 122
+ G+ + GR L++ A NR
Sbjct: 126 GLQGESIEGRTLSIEKARRNR 146
>gi|324518222|gb|ADY47039.1| Transformer-2 protein beta [Ascaris suum]
Length = 243
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 29 RGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGF 87
R RY GR P + L V + + D++R F ++G I+ + L D YSG RGFGF
Sbjct: 123 RSRYNDGRDNPEPCACLGVFGMSLNTSERDLKRIFGEYGEIETVQLVYDRYSGRSRGFGF 182
Query: 88 IQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
+ F +A AK H+ V+ G + V F+
Sbjct: 183 VYFQTTKEAMRAKEHLRDAVIDGMRVRVDFS 213
>gi|395860828|ref|XP_003802706.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Otolemur
garnettii]
Length = 391
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF FI F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|388858649|emb|CCF48487.1| related to Transformer-2 protein homolog [Ustilago hordei]
Length = 346
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V L + D+ F ++GAI+ + D +S EPRGF F+ FV+ +DA A
Sbjct: 76 NNLHVSGLSNRTTDRDLEDAFGKYGAIERAQVMYDPHSREPRGFAFVTFVKAEDAEAAIT 135
Query: 102 HMDGQVLLGRELTVVFAEENRKK 124
M+G LGR++TV A R +
Sbjct: 136 AMNGTEFLGRKITVDKARRGRAR 158
>gi|330843751|ref|XP_003293810.1| hypothetical protein DICPUDRAFT_84328 [Dictyostelium purpureum]
gi|325075834|gb|EGC29677.1| hypothetical protein DICPUDRAFT_84328 [Dictyostelium purpureum]
Length = 292
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V NL R ED+R F QFG I + + D + E RGFGF+ F+ D+A +A
Sbjct: 69 TLHVSNLNPKTREEDLRDTFAQFGKIAECTILVDPNTKESRGFGFVTFLSSDEATDAISR 128
Query: 103 MDGQVLLGRELTV 115
+D L G + V
Sbjct: 129 LDSSKLDGNVIRV 141
>gi|71043834|ref|NP_001020834.1| RNA-binding motif protein, X chromosome [Rattus norvegicus]
gi|81907907|sp|Q4V898.1|RBMX_RAT RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; AltName: Full=RNA-binding motif protein,
X chromosome retrogene; AltName: Full=RNA-binding motif
protein, X chromosome retrogene-like; Contains: RecName:
Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|66910650|gb|AAH97479.1| RNA binding motif protein, X-linked [Rattus norvegicus]
gi|149015799|gb|EDL75123.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_b [Rattus norvegicus]
Length = 390
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|367025775|ref|XP_003662172.1| hypothetical protein MYCTH_2314855 [Myceliophthora thermophila ATCC
42464]
gi|347009440|gb|AEO56927.1| hypothetical protein MYCTH_2314855 [Myceliophthora thermophila ATCC
42464]
Length = 324
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + +I R FE++G ++ + RD +SGE RGFGF++ V + A A
Sbjct: 70 SNLFVTGIHPRLEESEITRLFEKYGEVEKCQIMRDPHSGESRGFGFVKMVTSEQADAAME 129
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L + A
Sbjct: 130 GLRGEVIEGRTLNIEKA 146
>gi|303323191|ref|XP_003071587.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111289|gb|EER29442.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320033282|gb|EFW15230.1| transformer-SR ribonucleoprotein [Coccidioides posadasii str.
Silveira]
Length = 271
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T+L V + D+ R FE++G +++ + D ++ E RGFGF+ D A AK
Sbjct: 66 TNLFVTGIHPRLTEADVSRLFEKYGDVQNCSIMLDPHTKESRGFGFVNMATSDQAEAAKE 125
Query: 102 HMDGQVLLGRELTVVFAEENR 122
+ G+ + GR L++ A NR
Sbjct: 126 GLQGESIEGRTLSIEKARRNR 146
>gi|119331082|ref|NP_001073196.1| heterogeneous nuclear ribonucleoprotein G [Gallus gallus]
gi|53130710|emb|CAG31684.1| hypothetical protein RCJMB04_9j22 [Gallus gallus]
gi|169139272|gb|ACA48585.1| RNA binding motif protein, X-linked [Gallus gallus]
Length = 385
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|209154702|gb|ACI33583.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 120
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
L + V NL ++ ++ R F +G ++ +++ R+ P GF F++F +P DA +A
Sbjct: 12 LDCKVYVGNLGNNGNKTELERSFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDATDA 66
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSP 159
R +DG+ L G + V + G R R R PPP +SR P R
Sbjct: 67 VRELDGRTLSGSRVRVELSN--------------GEKRTRNRGPPPSWSRRP-----RDD 107
Query: 160 SYGRDYSPPPRRR 172
GR SPP RRR
Sbjct: 108 HRGRRGSPPARRR 120
>gi|224097264|ref|XP_002190045.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 1
[Taeniopygia guttata]
Length = 377
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|156839481|ref|XP_001643431.1| hypothetical protein Kpol_487p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114041|gb|EDO15573.1| hypothetical protein Kpol_487p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 376
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 38 RDLPTSLLVRNLRHDCRPEDIRRPFEQFGAI--KDIYLPRDYYSGEPRGFGFIQFVEPDD 95
R+ S+ V NL +DC PED+R F G + DI R G RG G ++F DD
Sbjct: 64 RNYANSVFVGNLTYDCTPEDLRDHFSTIGEVVRADIITSR----GHHRGMGTVEFTNADD 119
Query: 96 AAEAKRHMDGQVLLGRELTV 115
EA DG LL R++ V
Sbjct: 120 VNEAISQYDGSYLLDRQIFV 139
>gi|119189299|ref|XP_001245256.1| hypothetical protein CIMG_04697 [Coccidioides immitis RS]
gi|392868155|gb|EJB11445.1| transformer-SR ribonucleoprotein [Coccidioides immitis RS]
Length = 271
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T+L V + D+ R FE++G +++ + D ++ E RGFGF+ D A AK
Sbjct: 66 TNLFVTGIHPRLTEADVSRLFEKYGDVQNCSIMLDPHTKESRGFGFVNMATSDQAEAAKE 125
Query: 102 HMDGQVLLGRELTVVFAEENR 122
+ G+ + GR L++ A NR
Sbjct: 126 GLQGESIEGRTLSIEKARRNR 146
>gi|403256025|ref|XP_003920702.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 391
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|291401898|ref|XP_002717345.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
gi|291408303|ref|XP_002720376.1| PREDICTED: RNA binding motif protein, X-linked [Oryctolagus
cuniculus]
Length = 391
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|291224719|ref|XP_002732349.1| PREDICTED: rbp1-like RNA-binding protein PB-like [Saccoglossus
kowalevskii]
Length = 247
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
+ + + V +LR D R ED+ + F +FG + DI++ R+ P GF F++F P DA A
Sbjct: 2 VASRIYVGDLRPDVRKEDLEKEFGKFGRVVDIWIARN-----PPGFAFLEFDSPKDADVA 56
Query: 100 KRHMDGQVLLGRELTV 115
R +DG+ + G + V
Sbjct: 57 VRSLDGKSVCGSRVRV 72
>gi|108744011|gb|ABG02278.1| heterogeneous nuclear ribonucleoprotein G [Haplochromis burtoni]
Length = 391
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AAREMNGKSLDGKPIKVEQATK 86
>gi|345306629|ref|XP_001510789.2| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Ornithorhynchus anatinus]
Length = 420
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 31 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 90
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 91 AARDMNGKSLDGKAIKV----EQATKPS 114
>gi|400596147|gb|EJP63931.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 334
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ + FE++G ++ + +D +S E RGFGF++ V P+ A A+
Sbjct: 70 SNLFVTGIHPRLSEAEVTKMFEKYGDVEKCQIMKDPHSKESRGFGFVKMVTPEQADAARE 129
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 130 GLQGEVIEGRTLSIEKA 146
>gi|291049789|ref|NP_001166928.1| RNA binding motif protein [Monodelphis domestica]
gi|284080635|gb|ADB77891.1| RNA binding motif protein [Monodelphis domestica]
Length = 392
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKGLEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKSIKV----EQATKPS 88
>gi|291400889|ref|XP_002716811.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 391
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|6755296|ref|NP_035382.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|262231769|ref|NP_001160095.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|81917893|sp|Q9WV02.1|RBMX_MOUSE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|5579011|emb|CAB51362.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|13277600|gb|AAH03710.1| RNA binding motif protein, X chromosome [Mus musculus]
gi|74149379|dbj|BAE22448.1| unnamed protein product [Mus musculus]
gi|148710228|gb|EDL42174.1| RNA binding motif protein, X chromosome, isoform CRA_e [Mus
musculus]
Length = 391
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|297711157|ref|XP_002832216.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Pongo abelii]
Length = 438
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 52 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 111
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 112 AARDMNGKSLDGKAIKV----EQATKPS 135
>gi|209147621|gb|ACI32898.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 120
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
L + V NL ++ ++ R F +G ++ +++ R+ P GF F++F +P DA +A
Sbjct: 12 LDCKVYVGNLGNNGNKTELERSFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDATDA 66
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSP 159
R +DG+ L G + V + G R R R PPP +SR P R
Sbjct: 67 VRELDGRTLSGSRVRVELSN--------------GEKRTRNRGPPPSWSRRP-----RDD 107
Query: 160 SYGRDYSPPPRRR 172
GR SPP RRR
Sbjct: 108 HRGRRGSPPARRR 120
>gi|343959058|dbj|BAK63384.1| heterogeneous nuclear ribonucleoprotein G [Pan troglodytes]
Length = 391
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|346322984|gb|EGX92582.1| transformer-SR ribonucleoprotein, putative [Cordyceps militaris
CM01]
Length = 375
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ + FE++G ++ + +D +S E RGFGF++ V P+ A A+
Sbjct: 70 SNLFVTGIHPRLSEAEVTKMFEKYGEVEKCQIMKDPHSKESRGFGFVKMVTPEQAEAARE 129
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 130 GLQGEVIEGRTLSIEKA 146
>gi|198424500|ref|XP_002131886.1| PREDICTED: similar to Transformer-2 protein homolog (TRA-2 alpha)
[Ciona intestinalis]
Length = 283
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
L V L D+R F ++G I DI + D +G RGFGF+ F DDAAEAK
Sbjct: 110 CLGVFGLSLYTNDSDLRSVFSRYGRITDINVVIDQKTGRSRGFGFVYFDNDDDAAEAKER 169
Query: 103 MDGQVLLGRELTVVFAEENR 122
+G L GR + V ++ R
Sbjct: 170 ANGMELDGRNIRVDYSITKR 189
>gi|229367606|gb|ACQ58783.1| Heterogeneous nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 289
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETTEKALEQYFSKYGGIVEVILMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPSDMRARERG 134
A R M+G+ L G+ + V E KP A RG
Sbjct: 65 AAREMNGKSLDGKPIKV----EQATKPQFESAGRRG 96
>gi|355715855|gb|AES05424.1| RNA binding motif protein, X-linked [Mustela putorius furo]
Length = 392
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 6 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 65
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 66 AARDMNGKSLDGKAIKV----EQATKPS 89
>gi|330796400|ref|XP_003286255.1| hypothetical protein DICPUDRAFT_87071 [Dictyostelium purpureum]
gi|325083760|gb|EGC37204.1| hypothetical protein DICPUDRAFT_87071 [Dictyostelium purpureum]
Length = 265
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS 79
RRG +PR R P+ +L V L DI+ F +FG I + L D +
Sbjct: 70 RRGDYNTPRNRLANTAS---PSCVLGVFGLSPSTEERDIKDEFTKFGKIDHVDLIMDRKT 126
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSD-MRARERGRGRF 138
G + FGF+ F DDA AK +L G+ + F+ K+P D R G ++
Sbjct: 127 GRSKCFGFVYFENKDDAVRAKEECQDLILHGKHIRTDFSAT--KRPHDPTPGRYYGNPKY 184
Query: 139 -RRRSPPPRYS--RSPPPRYARSPSYGRD 164
RRSPPPR+S RY R YGR+
Sbjct: 185 DSRRSPPPRFSPYGERGERYGREDRYGRE 213
>gi|426257491|ref|XP_004022360.1| PREDICTED: RNA-binding motif protein, X chromosome [Ovis aries]
Length = 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|66357806|ref|XP_626081.1| SPAC25G10.01-like RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|46227164|gb|EAK88114.1| SPAC25G10.01-like RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|323510225|dbj|BAJ78006.1| cgd5_1330 [Cryptosporidium parvum]
Length = 253
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 36 RGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDD 95
R D +L V L + +D+RR FE +G + D +L + SGE R FGF+ ++
Sbjct: 65 RSNDPSCTLYVCRLSLKTKEDDLRRLFEDYGEVTDCHLVTNPLSGESRCFGFVTMGNEEE 124
Query: 96 AAEAKRHMDGQVLLGRELTVVFAEENRKKPSD 127
AA AK +DG+ L V A R KP D
Sbjct: 125 AARAKDALDGKEYQDASLKVETA--RRAKPYD 154
>gi|301769089|ref|XP_002919961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Ailuropoda melanoleuca]
gi|281352732|gb|EFB28316.1| hypothetical protein PANDA_008640 [Ailuropoda melanoleuca]
Length = 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|29893585|gb|AAP06839.1| putative transformer serine/arginine-rich ribonucleoprotein [Oryza
sativa Japonica Group]
gi|125585702|gb|EAZ26366.1| hypothetical protein OsJ_10248 [Oryza sativa Japonica Group]
Length = 324
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 93/197 (47%), Gaps = 40/197 (20%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L V L D+ + F G + D + D ++ E RGFGF+ +A +++
Sbjct: 22 LYVTGLSARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLCIKYL 81
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGR----GRF-----RRRSPPPRYSRSPPP- 153
D VL GR +TV A+ R RGR GR+ +P RYS S P
Sbjct: 82 DRSVLEGRVITVEKAK-----------RRRGRTPTPGRYLGTKSSCVTPARRYSPSYSPV 130
Query: 154 ---RYAR--SPSYGRDYSPPPRRRNYS-----RSVSPHGQNYSRERSYS---RSPAYDGP 200
RY+ SP R YSP RRR+YS RS SP Y R RSYS R +Y P
Sbjct: 131 ERDRYSSRYSPERERSYSPYGRRRSYSPYNRRRSYSP----YERRRSYSPHERRQSY-SP 185
Query: 201 RGRSRSPHRGQRQSWSP 217
GRS SP+ G+R+S+SP
Sbjct: 186 YGRSPSPY-GRRRSYSP 201
>gi|348515473|ref|XP_003445264.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Oreochromis niloticus]
Length = 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AAREMNGKSLDGKPIKVEQATK 86
>gi|346716298|ref|NP_001231025.1| heterogeneous nuclear ribonucleoprotein G [Sus scrofa]
Length = 390
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|355757746|gb|EHH61271.1| hypothetical protein EGM_19240 [Macaca fascicularis]
Length = 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|402911572|ref|XP_003918396.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
gi|75076694|sp|Q4R7F0.1|RBMX_MACFA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|67969238|dbj|BAE00972.1| unnamed protein product [Macaca fascicularis]
gi|380813174|gb|AFE78461.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813176|gb|AFE78462.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813178|gb|AFE78463.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813180|gb|AFE78464.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813182|gb|AFE78465.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383411873|gb|AFH29150.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418689|gb|AFH32558.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418691|gb|AFH32559.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418693|gb|AFH32560.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418695|gb|AFH32561.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418697|gb|AFH32562.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418699|gb|AFH32563.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947302|gb|AFI37256.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947304|gb|AFI37257.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947306|gb|AFI37258.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947308|gb|AFI37259.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947310|gb|AFI37260.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947312|gb|AFI37261.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947314|gb|AFI37262.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|402582975|gb|EJW76920.1| hypothetical protein WUBG_12171 [Wuchereria bancrofti]
Length = 330
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 25 SPSPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPR 83
SP R RY GR P S L V + + D++R F ++G I+ + L D YSG R
Sbjct: 204 SPIRRSRYNDGRDNPEPCSCLGVFGMSLNTTERDLKRIFGEYGEIESVQLVYDRYSGRSR 263
Query: 84 GFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
GFGF+ F +A AK H+ V+ G + V F+
Sbjct: 264 GFGFVYFETTKEAIRAKDHLRDAVIDGMRVRVDFS 298
>gi|310790609|gb|EFQ26142.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 357
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + +++ R FE++G ++ + RD ++ E RGFGF++ V D A AK
Sbjct: 80 SNLFVTGIHPRLTEQEVTRMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSDQADAAKE 139
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+ + GR L++ A
Sbjct: 140 GLQGEQIEGRTLSIEKA 156
>gi|3256007|emb|CAA80599.1| hnRNP G protein [Homo sapiens]
Length = 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|410308290|gb|JAA32745.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308292|gb|JAA32746.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308294|gb|JAA32747.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308296|gb|JAA32748.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308298|gb|JAA32749.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308300|gb|JAA32750.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308302|gb|JAA32751.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308304|gb|JAA32752.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|56699409|ref|NP_002130.2| RNA-binding motif protein, X chromosome isoform 1 [Homo sapiens]
gi|206725512|ref|NP_001128678.1| RNA-binding motif protein, X chromosome [Pan troglodytes]
gi|74008547|ref|XP_866434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G isoform 6
[Canis lupus familiaris]
gi|149755726|ref|XP_001489601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Equus
caballus]
gi|397482297|ref|XP_003812367.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Pan
paniscus]
gi|410989483|ref|XP_004000991.1| PREDICTED: RNA-binding motif protein, X chromosome [Felis catus]
gi|23503093|sp|P38159.3|RBMX_HUMAN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Glycoprotein p43; AltName: Full=Heterogeneous
nuclear ribonucleoprotein G; Short=hnRNP G; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|160395526|sp|A5A6M3.1|RBMX_PANTR RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|13938569|gb|AAH07435.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|14279350|gb|AAK58567.1| RBMX [Homo sapiens]
gi|16306856|gb|AAH06550.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|39545947|gb|AAR28036.1| heterogeneous nuclear ribonucleoprotein G [Homo sapiens]
gi|119608859|gb|EAW88453.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608860|gb|EAW88454.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608861|gb|EAW88455.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608863|gb|EAW88457.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|123993071|gb|ABM84137.1| RNA binding motif protein, X-linked [synthetic construct]
gi|124000061|gb|ABM87539.1| RNA binding motif protein, X-linked [synthetic construct]
gi|146741480|dbj|BAF62396.1| RNA binding motif protein, X-linked [Pan troglodytes verus]
gi|410266422|gb|JAA21177.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266426|gb|JAA21179.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266428|gb|JAA21180.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266430|gb|JAA21181.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266432|gb|JAA21182.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266434|gb|JAA21183.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266436|gb|JAA21184.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348962|gb|JAA41085.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348964|gb|JAA41086.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348966|gb|JAA41087.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348968|gb|JAA41088.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348970|gb|JAA41089.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348972|gb|JAA41090.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348974|gb|JAA41091.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348976|gb|JAA41092.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|82802777|gb|ABB92439.1| RBM1 [Hylobates lar]
Length = 385
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|119482882|ref|XP_001261469.1| transformer-SR ribonucleoprotein, putative [Neosartorya fischeri
NRRL 181]
gi|119409624|gb|EAW19572.1| transformer-SR ribonucleoprotein, putative [Neosartorya fischeri
NRRL 181]
Length = 307
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + DI R FE++G +++ + D ++ E RGFGF++ V + A AK
Sbjct: 67 SNLFVTGIHPRLTESDISRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 126
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 127 GLQGEVIEGRTLSIEKA 143
>gi|285012962|ref|NP_001165510.1| heterogeneous nuclear ribonucleoprotein G [Bos taurus]
gi|348557903|ref|XP_003464758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|284080621|gb|ADB77884.1| Rbmx [Bos taurus]
gi|296471213|tpg|DAA13328.1| TPA: RNA binding motif protein, X-linked isoform 1 [Bos taurus]
gi|440895247|gb|ELR47495.1| Heterogeneous nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|410227798|gb|JAA11118.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227802|gb|JAA11120.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227804|gb|JAA11121.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227806|gb|JAA11122.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227808|gb|JAA11123.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227810|gb|JAA11124.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227812|gb|JAA11125.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|390474384|ref|XP_002757703.2| PREDICTED: RNA-binding motif protein, X chromosome-like, partial
[Callithrix jacchus]
Length = 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|340914863|gb|EGS18204.1| hypothetical protein CTHT_0062190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 344
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + +I R FE++G ++ + RD ++GE RGFGF++ + + A A
Sbjct: 72 SNLFVTGIHPRLEESEITRLFEKYGEVEKCQIMRDPHTGESRGFGFVKMMTSEQAEAAME 131
Query: 102 HMDGQVLLGRELTVVFAEENR 122
+ G+++ GR L + A +R
Sbjct: 132 GLKGEIIEGRTLNIEKARRSR 152
>gi|125543223|gb|EAY89362.1| hypothetical protein OsI_10866 [Oryza sativa Indica Group]
Length = 324
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 91/193 (47%), Gaps = 30/193 (15%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L D+ + F G + D + D ++ E RGFGF+ +A ++
Sbjct: 21 NLYVTGLSARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLCIKY 80
Query: 103 MDGQVLLGRELTVVFAEENR-KKPSDMR---ARERGRGRFRRRSPP------PRYSRSPP 152
+D VL GR +TV A+ R + P+ R + RR SP RYS
Sbjct: 81 LDRSVLEGRVITVEKAKRRRGRTPTPGRYLGTKSSCVTPARRYSPSYSPVERDRYSSRYS 140
Query: 153 PRYARSPS-YG--RDYSPPPRRRNYS-----RSVSPHGQNYSRERSYSRSPAYDGPRGRS 204
P RS S YG R YSP RRR+YS RS SPH R RSYS P GRS
Sbjct: 141 PERERSYSPYGRRRSYSPYNRRRSYSPYERRRSYSPH----ERRRSYS-------PYGRS 189
Query: 205 RSPHRGQRQSWSP 217
SP+ G+R+S+SP
Sbjct: 190 PSPY-GRRRSYSP 201
>gi|82802775|gb|ABB92438.1| RBM1 [Pongo pygmaeus]
Length = 385
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|297849028|ref|XP_002892395.1| hypothetical protein ARALYDRAFT_470756 [Arabidopsis lyrata subsp.
lyrata]
gi|297338237|gb|EFH68654.1| hypothetical protein ARALYDRAFT_470756 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V L H D+ F + G + D++L D ++ E RGFGFI DA R
Sbjct: 74 NSLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMESVGDANRCIR 133
Query: 102 HMDGQVLLGRELTV 115
++D VL GR +TV
Sbjct: 134 YLDHSVLQGRVITV 147
>gi|170582756|ref|XP_001896272.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158596557|gb|EDP34885.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 235
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 26 PSPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRG 84
P R RY GR P S L V + + D++R F ++G I+ + L D YSG RG
Sbjct: 110 PIRRSRYNDGRDNPEPCSCLGVFGMSLNTTERDLKRIFGEYGEIESVQLVYDRYSGRSRG 169
Query: 85 FGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
FGF+ F +A AK H+ V+ G + V F+
Sbjct: 170 FGFVYFETTKEAIRAKDHLRDAVIDGMRVRVDFS 203
>gi|417410380|gb|JAA51664.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 398
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 6 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 65
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 66 AARDMNGKSLDGKAIKV----EQATKPS 89
>gi|82802769|gb|ABB92435.1| RBM1 [Homo sapiens]
Length = 384
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|241681381|ref|XP_002411590.1| SN-RNP U1, putative [Ixodes scapularis]
gi|215504330|gb|EEC13824.1| SN-RNP U1, putative [Ixodes scapularis]
Length = 405
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V + +D +RR FE FG+IK I + + +G+PRG+ F+++ D A +H
Sbjct: 103 TLFVARVNYDTSESKLRREFEVFGSIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYKH 162
Query: 103 MDGQVLLGRELTV 115
DG+ + GR + V
Sbjct: 163 ADGKKIDGRRVLV 175
>gi|67593714|ref|XP_665745.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656562|gb|EAL35515.1| hypothetical protein Chro.50251 [Cryptosporidium hominis]
Length = 254
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 36 RGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDD 95
R D +L V L + +D+RR FE +G + D +L + SGE R FGF+ ++
Sbjct: 65 RSNDPSCTLYVCRLSLKTKEDDLRRLFEDYGEVTDCHLVTNPLSGESRCFGFVTMGNEEE 124
Query: 96 AAEAKRHMDGQVLLGRELTVVFAEENRKKPSD 127
AA AK +DG+ L V A R KP D
Sbjct: 125 AARAKDALDGKEYQDASLKVETA--RRAKPYD 154
>gi|82802771|gb|ABB92436.1| RBM1 [Pan troglodytes]
gi|82802773|gb|ABB92437.1| RBM1 [Gorilla gorilla]
Length = 385
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|332022560|gb|EGI62862.1| RNA-binding protein with serine-rich domain 1-A [Acromyrmex
echinatior]
Length = 341
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEA 99
PT + + +L + + + F +G IK + D + + RGF +++F D+A A
Sbjct: 181 PTKIHIGHLTRNVTKDHVMEIFSTYGQIKMVDFALDKLHPNQGRGFAYVEFETADEAENA 240
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRY---SRSPPPRYA 156
+HMDG + G+E+T + +P MR G G R PPR+ R+ PPRY
Sbjct: 241 MKHMDGGQIDGQEITAAPVLLPKPRPLPMRRMSPGMG----RRAPPRWGGGGRNTPPRYR 296
Query: 157 R 157
R
Sbjct: 297 R 297
>gi|121711495|ref|XP_001273363.1| transformer-SR ribonucleoprotein, putative [Aspergillus clavatus
NRRL 1]
gi|119401514|gb|EAW11937.1| transformer-SR ribonucleoprotein, putative [Aspergillus clavatus
NRRL 1]
Length = 311
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + DI R FE++G +++ + D ++ E RGFGF++ V + A AK
Sbjct: 68 SNLFVTGINPRLTESDISRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 127
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 128 GLQGEVIEGRTLSIEKA 144
>gi|115646704|gb|ABJ17088.1| SD01194p [Drosophila melanogaster]
Length = 708
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSG-EPRGFGFIQFVEPDDAAEAKRH 102
L ++ L E I F FGA+ + P D + G + RG+ F+++ P+D A A +H
Sbjct: 537 LHIKGLTRQVTKEHITEIFGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPEDCASAIKH 596
Query: 103 MDGQVLLGRELTV-VFAEENRKKP 125
M+G + G+ + V F E K P
Sbjct: 597 MNGGQIDGKLIRVSAFQESMLKAP 620
>gi|380489744|emb|CCF36497.1| transformer-SR ribonucleoprotein [Colletotrichum higginsianum]
Length = 330
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + +++ R FE++G ++ + RD ++ E RGFGF++ V D A AK
Sbjct: 80 SNLFVTGIHPRLTEQEVTRMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSDQADAAKE 139
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+ + GR L++ A
Sbjct: 140 GLQGEQIEGRTLSIEKA 156
>gi|198435747|ref|XP_002131795.1| PREDICTED: similar to ribonucleoprotein antigen [Ciona
intestinalis]
Length = 461
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 37 GRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDA 96
G D +L V + +D +RR FE +G I+ + + +D +G+PRG+ F++F D
Sbjct: 99 GGDAFKTLFVSRINYDTTESKLRREFETYGKIRKVTIVKDVATGKPRGYAFVEFDRERDM 158
Query: 97 AEAKRHMDGQVLLGRELTV 115
A + DG+ + GR + V
Sbjct: 159 HTAYKSADGKKIDGRRVLV 177
>gi|224012523|ref|XP_002294914.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
gi|220969353|gb|EED87694.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
Length = 612
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V+NL + +R F G I + +D +G RGFGF+ + P+DA A
Sbjct: 295 VNLYVKNLDDTVTDDVLRDEFSAMGTITSARVMKDLKTGISRGFGFVCYSTPEDATRAVN 354
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRAR-ERGRGRF 138
M+G+++LG+ + V A+ + + + A+ +GRG
Sbjct: 355 EMNGKIILGKPIFVALAQRRDVRRAQLEAQHNQGRGNL 392
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
++ V+NL + + F FG I + D +G +G+G++ + + AA A
Sbjct: 98 NIFVKNLHEGIDNKQLYDTFSLFGNILSCKVVTDKATGLSKGYGYVHYETNEAAASAIEK 157
Query: 103 MDGQVLLGRELTV-VF 117
+DG ++ G+E+ V VF
Sbjct: 158 LDGMLIDGKEVQVGVF 173
>gi|354475287|ref|XP_003499861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Cricetulus griseus]
Length = 289
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|108707341|gb|ABF95136.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 347
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 94/199 (47%), Gaps = 40/199 (20%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V L D+ + F G + D + D ++ E RGFGF+ +A +
Sbjct: 43 NNLYVTGLSARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLCIK 102
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGR----GRF-----RRRSPPPRYSRSPP 152
++D VL GR +TV A+ R RGR GR+ +P RYS S
Sbjct: 103 YLDRSVLEGRVITVEKAK-----------RRRGRTPTPGRYLGTKSSCVTPARRYSPSYS 151
Query: 153 P----RYAR--SPSYGRDYSPPPRRRNYS-----RSVSPHGQNYSRERSYS---RSPAYD 198
P RY+ SP R YSP RRR+YS RS SP Y R RSYS R +Y
Sbjct: 152 PVERDRYSSRYSPERERSYSPYGRRRSYSPYNRRRSYSP----YERRRSYSPHERRQSY- 206
Query: 199 GPRGRSRSPHRGQRQSWSP 217
P GRS SP+ G+R+S+SP
Sbjct: 207 SPYGRSPSPY-GRRRSYSP 224
>gi|108707340|gb|ABF95135.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 346
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 94/199 (47%), Gaps = 40/199 (20%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V L D+ + F G + D + D ++ E RGFGF+ +A +
Sbjct: 42 NNLYVTGLSARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLCIK 101
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGR----GRF-----RRRSPPPRYSRSPP 152
++D VL GR +TV A+ R RGR GR+ +P RYS S
Sbjct: 102 YLDRSVLEGRVITVEKAK-----------RRRGRTPTPGRYLGTKSSCVTPARRYSPSYS 150
Query: 153 P----RYAR--SPSYGRDYSPPPRRRNYS-----RSVSPHGQNYSRERSYS---RSPAYD 198
P RY+ SP R YSP RRR+YS RS SP Y R RSYS R +Y
Sbjct: 151 PVERDRYSSRYSPERERSYSPYGRRRSYSPYNRRRSYSP----YERRRSYSPHERRQSY- 205
Query: 199 GPRGRSRSPHRGQRQSWSP 217
P GRS SP+ G+R+S+SP
Sbjct: 206 SPYGRSPSPY-GRRRSYSP 223
>gi|161077984|ref|NP_001097042.1| CG34334 [Drosophila melanogaster]
gi|113205041|gb|ABI34254.1| SD20656p [Drosophila melanogaster]
gi|158031885|gb|ABW09459.1| CG34334 [Drosophila melanogaster]
Length = 708
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSG-EPRGFGFIQFVEPDDAAEAKRH 102
L ++ L E I F FGA+ + P D + G + RG+ F+++ P+D A A +H
Sbjct: 537 LHIKGLTRQVTKEHITEIFGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPEDCASAIKH 596
Query: 103 MDGQVLLGRELTV-VFAEENRKKP 125
M+G + G+ + V F E K P
Sbjct: 597 MNGGQIDGKLIRVSAFQESMLKAP 620
>gi|432099499|gb|ELK28647.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Myotis davidii]
Length = 535
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 174 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 233
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 234 AARDMNGKSLDGKAIKV----EQATKPS 257
>gi|157823451|ref|NP_001100890.1| RNA-binding motif protein, X chromosome retrogene-like [Rattus
norvegicus]
gi|71152131|sp|P84586.1|RMXRL_RAT RecName: Full=RNA-binding motif protein, X chromosome
retrogene-like; AltName: Full=Heterogeneous nuclear
ribonucleoprotein G retrogene-like; Short=hnRNP G;
AltName: Full=RNA-binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA-binding motif
protein, X chromosome retrogene-like, N-terminally
processed
gi|149037963|gb|EDL92323.1| RNA binding motif protein, X chromosome retrogene (predicted)
[Rattus norvegicus]
Length = 388
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I +I L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
R M+G+ L G+ + V E KPS
Sbjct: 65 VARDMNGKSLDGKAIKV----EQATKPS 88
>gi|440636081|gb|ELR06000.1| hypothetical protein GMDG_01961 [Geomyces destructans 20631-21]
Length = 307
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ R FE++G ++ + D ++ E RGFGF++ V D A AK
Sbjct: 79 SNLFVTGIHPRLSEAEVTRLFEKYGEVEKCQIMLDPHTKESRGFGFVKMVTADQADAAKE 138
Query: 102 HMDGQVLLGRELTVVFAEENR 122
+ G+V+ GR L++ A +R
Sbjct: 139 GLQGEVIEGRTLSIEKARRSR 159
>gi|82802779|gb|ABB92440.1| RBM1 [Chlorocebus sabaeus]
Length = 385
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|47086837|ref|NP_997763.1| RNA-binding motif protein, X chromosome [Danio rerio]
gi|82241461|sp|Q7ZWA3.1|RBMX_DANRE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|29436819|gb|AAH49509.1| RNA binding motif protein, X-linked [Danio rerio]
gi|47846286|emb|CAG30733.1| RNA binding motif protein [Danio rerio]
gi|48735158|gb|AAH71326.1| RNA binding motif protein, X-linked [Danio rerio]
Length = 379
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F +FG I ++ L +D + + RGF F+ + P DA +
Sbjct: 5 DRPGKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AAREMNGKPLDGKPIKVEQATK 86
>gi|448878216|gb|AGE46071.1| arginine/serine-rich splicing factor SC30 transcript X [Zea mays]
Length = 136
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
SLLV N+ +D+ FE++G + D++ PRD +G+ RGF F+++ D+A +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFTPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 103 MDGQVLLGRELTVVFAE 119
+DG+ + GR + V FA+
Sbjct: 77 LDGRDVDGRNIMVQFAK 93
>gi|402860841|ref|XP_003894827.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
Length = 391
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDQKINKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|295663727|ref|XP_002792416.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279086|gb|EEH34652.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 308
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + D+ R FE++G +++ + D ++ E RGFGF++ V + A AK
Sbjct: 72 SNLFVTGIHPRLTESDVSRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKE 131
Query: 102 HMDGQVLLGRELTV 115
+ G+V+ GR L++
Sbjct: 132 GLQGEVIEGRTLSI 145
>gi|390348058|ref|XP_796831.2| PREDICTED: uncharacterized protein LOC592201 [Strongylocentrotus
purpuratus]
Length = 324
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 74/164 (45%), Gaps = 27/164 (16%)
Query: 24 RSP-SPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGE 81
RSP S R R+ G R +S L V L D+R +E +G + ++ + D+ +G
Sbjct: 131 RSPMSDRRRHHGDRENPTESSCLGVFGLSLYTTERDLRDVYEHYGTLTNVNVVYDHQTGR 190
Query: 82 PRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENRK----------KPS----D 127
RGF F+ F DA A+ +G + GR + V F+ R KP+ D
Sbjct: 191 SRGFAFVMFANTGDATAARESTNGTEVDGRRIRVDFSITERAHTPTPGVYMGKPTSNKRD 250
Query: 128 MRARERG---RGRFR-------RRSPPPRYSRSPPPRYA-RSPS 160
ERG RG R RRSP P Y R+P P Y RSPS
Sbjct: 251 FNRGERGYHPRGYHRSPSPHYYRRSPSPYYRRTPSPHYYRRSPS 294
>gi|239609512|gb|EEQ86499.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis ER-3]
gi|327350257|gb|EGE79114.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 315
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 9 SPPPRGSGGGYGRRGRSPSPRGRYG---------GGRGRD-------LPTSLLVRNLRHD 52
S PRG+G G G R RS SP GR +G D ++L V +
Sbjct: 24 SASPRGNGRG-GARNRSMSPIGRGDHLRVPQNDRAMKGNDDDEGSVNTGSNLFVTGIHPR 82
Query: 53 CRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRE 112
D+ R FE++G +++ + D ++ E RGFGF++ V + A AK + G+V+ GR
Sbjct: 83 LTESDVSRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTSEQADAAKEGLQGEVIEGRT 142
Query: 113 LTV 115
L++
Sbjct: 143 LSI 145
>gi|332809466|ref|XP_003339040.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|332809468|ref|XP_003308251.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|426330271|ref|XP_004026144.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 3
[Gorilla gorilla gorilla]
gi|426330273|ref|XP_004026145.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 4
[Gorilla gorilla gorilla]
Length = 391
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|297279100|ref|XP_002801676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Macaca mulatta]
gi|297279102|ref|XP_002801677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Macaca mulatta]
Length = 391
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|351715732|gb|EHB18651.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 356
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|327286671|ref|XP_003228053.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Anolis carolinensis]
Length = 384
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AARDMNGKSLDGKAIKVEQATK 86
>gi|261196578|ref|XP_002624692.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239595937|gb|EEQ78518.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
Length = 312
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 9 SPPPRGSGGGYGRRGRSPSPRGRYG---------GGRGRD-------LPTSLLVRNLRHD 52
S PRG+G G G R RS SP GR +G D ++L V +
Sbjct: 21 SASPRGNGRG-GARNRSMSPIGRGDHLRVPQNDRAMKGNDDDEGSVNTGSNLFVTGIHPR 79
Query: 53 CRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRE 112
D+ R FE++G +++ + D ++ E RGFGF++ V + A AK + G+V+ GR
Sbjct: 80 LTESDVSRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTSEQADAAKEGLQGEVIEGRT 139
Query: 113 LTV 115
L++
Sbjct: 140 LSI 142
>gi|387018118|gb|AFJ51177.1| Heterogeneous nuclear ribonucleoprotein G-like [Crotalus
adamanteus]
Length = 384
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L V L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AARDMNGKSLDGKSIKVEQATK 86
>gi|225677904|gb|EEH16188.1| hypothetical protein PABG_06275 [Paracoccidioides brasiliensis
Pb03]
Length = 308
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + D+ R FE++G +++ + D ++ E RGFGF++ V + A AK
Sbjct: 72 SNLFVTGIHPRLTESDVSRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKE 131
Query: 102 HMDGQVLLGRELTV 115
+ G+V+ GR L++
Sbjct: 132 GLQGEVIEGRTLSI 145
>gi|21361809|ref|NP_062556.2| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|242117971|ref|NP_001156008.1| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|74760797|sp|Q96E39.1|RMXL1_HUMAN RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
gi|15277908|gb|AAH12942.1| Cysteine conjugate-beta lyase 2 [Homo sapiens]
gi|57997143|emb|CAI46148.1| hypothetical protein [Homo sapiens]
gi|119593561|gb|EAW73155.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|119593562|gb|EAW73156.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|208967733|dbj|BAG72512.1| cysteine conjugate-beta lyase 2 [synthetic construct]
Length = 390
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|402082552|gb|EJT77570.1| hypothetical protein GGTG_02676 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 318
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ R FE++G ++ + RD ++ E RGFGF++ V P+ A A
Sbjct: 71 SNLFVTGIHPRLVEAEVTRMFEKYGEVEKCQIMRDPHTQESRGFGFVKMVTPEQADAAIE 130
Query: 102 HMDGQVLLGRELTVVFAEENR 122
+ G+ + GR L++ A NR
Sbjct: 131 GLQGEAIEGRTLSIEKARRNR 151
>gi|322618|pir||S28147 U1 snRNP 70K protein - Arabidopsis thaliana (fragment)
Length = 303
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L ++ I+R FE +G IK ++L D + +P+G+ FI+++ D A +
Sbjct: 33 TLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQ 92
Query: 103 MDGQVLLGRELTVVFAEENR 122
D + L E +++ ENR
Sbjct: 93 ADDKRLTAEEFWLMWERENR 112
>gi|326929413|ref|XP_003210859.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Meleagris gallopavo]
Length = 302
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS- 79
R+ RSPSPR PT + V L + + I F +G IK I +P D +
Sbjct: 146 RKRRSPSPR-----------PTKVHVGRLTRNVTKDHIMEIFSTYGKIKMIDMPVDRLNP 194
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ +++F PDDA +A +HMDG + G+E+T
Sbjct: 195 HLSKGYAYVEFENPDDAEKALKHMDGGQIDGQEITAT 231
>gi|226287356|gb|EEH42869.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 305
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + D+ R FE++G +++ + D ++ E RGFGF++ V + A AK
Sbjct: 69 SNLFVTGIHPRLTESDVSRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKE 128
Query: 102 HMDGQVLLGRELTV 115
+ G+V+ GR L++
Sbjct: 129 GLQGEVIEGRTLSI 142
>gi|406868018|gb|EKD21055.1| RNA binding domain containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 426
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S+ V NL D EDI+R FE FG IK + + D G +GFG+++F + A A
Sbjct: 232 SIYVGNLLFDITQEDIQREFESFGPIKSVTIASD-NRGLSKGFGYVEFESIEQATAAIEG 290
Query: 103 MDGQVLLGRELTVVFAEENRKKPS 126
+ VL GR L V + ++++ P+
Sbjct: 291 KNQAVLEGRRLVVNYMNKSQRSPA 314
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L + NL + D+ + F + D+ + D +G+PRGF FV+ + A + K
Sbjct: 325 TLFIGNLAFEMSDADLNKLFRDIRNVIDVRVAIDRRTGQPRGFAHADFVDVESAIKGKDA 384
Query: 103 MDGQVLLGRELTVVFA 118
+ G+ + GR L + F+
Sbjct: 385 LLGKEVYGRTLRIDFS 400
>gi|70986996|ref|XP_748983.1| transformer-SR ribonucleoprotein [Aspergillus fumigatus Af293]
gi|66846613|gb|EAL86945.1| transformer-SR ribonucleoprotein, putative [Aspergillus fumigatus
Af293]
gi|159123248|gb|EDP48368.1| transformer-SR ribonucleoprotein, putative [Aspergillus fumigatus
A1163]
Length = 304
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + DI R FE++G ++ + D ++ E RGFGF++ V + A AK
Sbjct: 67 SNLFVTGIHPRLTESDISRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 126
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 127 GLQGEVIEGRTLSIEKA 143
>gi|344297709|ref|XP_003420539.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Loxodonta
africana]
Length = 391
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KP+
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPT 88
>gi|449278940|gb|EMC86668.1| RNA-binding protein with serine-rich domain 1, partial [Columba
livia]
Length = 284
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS- 79
R+ RSPSPR PT + V L + + I F +G IK I +P D +
Sbjct: 128 RKRRSPSPR-----------PTKVHVGRLTRNVTKDHIMEIFSTYGKIKMIDMPVDRLNP 176
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ +++F PDDA +A +HMDG + G+E+T
Sbjct: 177 HLSKGYAYVEFENPDDAEKALKHMDGGQIDGQEITAT 213
>gi|149015800|gb|EDL75124.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_c [Rattus norvegicus]
Length = 289
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|74228065|dbj|BAE37998.1| unnamed protein product [Mus musculus]
gi|148710226|gb|EDL42172.1| RNA binding motif protein, X chromosome, isoform CRA_c [Mus
musculus]
Length = 289
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|15229825|ref|NP_190636.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|13633916|sp|Q42404.1|RU17_ARATH RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|1255711|gb|AAD12773.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|1354469|gb|AAD12775.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|6561970|emb|CAB62436.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|14532500|gb|AAK63978.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|20334806|gb|AAM16264.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|332645171|gb|AEE78692.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 427
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L ++ I+R FE +G IK ++L D + +P+G+ FI+++ D A +
Sbjct: 139 TLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQ 198
Query: 103 MDGQVLLGRELTV 115
DGQ + GR + V
Sbjct: 199 ADGQKIDGRRVLV 211
>gi|238482369|ref|XP_002372423.1| transformer-SR ribonucleoprotein, putative [Aspergillus flavus
NRRL3357]
gi|317139223|ref|XP_003189145.1| transformer-SR ribonucleoprotein [Aspergillus oryzae RIB40]
gi|317139225|ref|XP_001817354.2| transformer-SR ribonucleoprotein [Aspergillus oryzae RIB40]
gi|220700473|gb|EED56811.1| transformer-SR ribonucleoprotein, putative [Aspergillus flavus
NRRL3357]
gi|391864654|gb|EIT73949.1| hypothetical protein Ao3042_10100 [Aspergillus oryzae 3.042]
Length = 308
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + DI R FE++G ++ + D ++ E RGFGF++ V + A AK
Sbjct: 68 SNLFVTGIHPRLTESDISRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 127
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 128 GLQGEVIEGRTLSIEKA 144
>gi|345480631|ref|XP_003424183.1| PREDICTED: hypothetical protein LOC100679022 [Nasonia vitripennis]
Length = 407
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
RR RSP PR PT + + +L + + I F +G IK I P D +
Sbjct: 219 RRERSPIPR-----------PTKIHIGHLTRNVTKDHITEIFSTYGNIKMIDFPIDKLHP 267
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
RGF +++F D+A A +HMDG + G+E+T
Sbjct: 268 AHCRGFAYVEFETADEAENAMKHMDGGQIDGQEITAA 304
>gi|414868573|tpg|DAA47130.1| TPA: hypothetical protein ZEAMMB73_186752, partial [Zea mays]
Length = 148
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSG 80
SLLVRN+ R ED+R PFE+FG ++D+Y+P+DYYSG
Sbjct: 111 SLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSG 148
>gi|145237470|ref|XP_001391382.1| transformer-SR ribonucleoprotein [Aspergillus niger CBS 513.88]
gi|134075854|emb|CAL00233.1| unnamed protein product [Aspergillus niger]
gi|350635498|gb|EHA23859.1| hypothetical protein ASPNIDRAFT_200274 [Aspergillus niger ATCC
1015]
Length = 315
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + DI R FE++G +++ + D ++ E RGFGF++ V + A AK
Sbjct: 67 SNLFVTGIHPRLTESDISRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 126
Query: 102 HMDGQVLLGRELTV 115
+ G+V+ GR L++
Sbjct: 127 GLQGEVIEGRTLSI 140
>gi|380811822|gb|AFE77786.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383417591|gb|AFH32009.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 289
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|363739745|ref|XP_415051.3| PREDICTED: RNA-binding protein with serine-rich domain 1 [Gallus
gallus]
Length = 284
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS- 79
R+ RSPSPR PT + V L + + I F +G IK I +P D +
Sbjct: 128 RKRRSPSPR-----------PTKVHVGRLTRNVTKDHIMEIFSTYGKIKMIDMPVDRLNP 176
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ +++F PDDA +A +HMDG + G+E+T
Sbjct: 177 HLSKGYAYVEFENPDDAEKALKHMDGGQIDGQEITAT 213
>gi|296236539|ref|XP_002763369.1| PREDICTED: RNA-binding motif protein, X chromosome [Callithrix
jacchus]
Length = 289
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|83765209|dbj|BAE55352.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 311
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + DI R FE++G ++ + D ++ E RGFGF++ V + A AK
Sbjct: 68 SNLFVTGIHPRLTESDISRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 127
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L++ A
Sbjct: 128 GLQGEVIEGRTLSIEKA 144
>gi|297819752|ref|XP_002877759.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
gi|297323597|gb|EFH54018.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L ++ I+R FE +G IK ++L D + +P+G+ FI+++ D A +
Sbjct: 139 TLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQ 198
Query: 103 MDGQVLLGRELTV 115
DGQ + GR + V
Sbjct: 199 ADGQKIDGRRVLV 211
>gi|158828228|gb|ABW81106.1| putRNAbp29 [Cleome spinosa]
Length = 338
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
SL V L H D+ F + G + D+ L D ++ E RGFGF+ +DA +
Sbjct: 44 NSLYVTGLSHRVTKRDLEDHFSKEGKVVDVNLVLDPWTRESRGFGFVTMENMEDANRCIK 103
Query: 102 HMDGQVLLGRELTVVFA 118
++D VL GR +TV A
Sbjct: 104 YLDRSVLEGRIITVEKA 120
>gi|374253685|sp|D4AE41.1|RMXL1_RAT RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
Length = 388
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I +I L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
R M+G+ L G+ + V E KPS
Sbjct: 65 VARDMNGKSLDGKAIKV----EQATKPS 88
>gi|403300126|ref|XP_003940808.1| PREDICTED: RNA binding motif protein, X-linked-like-1-like, partial
[Saimiri boliviensis boliviensis]
Length = 268
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|358369534|dbj|GAA86148.1| transformer-SR ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 314
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + DI R FE++G +++ + D ++ E RGFGF++ V + A AK
Sbjct: 67 SNLFVTGIHPRLTESDISRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 126
Query: 102 HMDGQVLLGRELTV 115
+ G+V+ GR L++
Sbjct: 127 GLQGEVIEGRTLSI 140
>gi|340520715|gb|EGR50951.1| predicted protein [Trichoderma reesei QM6a]
Length = 148
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+ L + L +R+ FE+FGA+++ + +D +G RGFGF+++V+ DA A
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYVQEADAQAAIA 61
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGR---GRFRRRSPPPRYSRSPPPRYARS 158
M+ GR + V A +N + R G GR +PP Y + PP Y +
Sbjct: 62 AMNNVEFDGRTIRVDKASDNGSRGERFFNRNGGMPYGGRAGYGTPPGSYGNAAPPGYGAA 121
Query: 159 PSYGRDYSPPPRRRNY 174
P+ Y P P R +
Sbjct: 122 PNM---YPPAPYGRGF 134
>gi|65301143|ref|NP_083936.1| RNA-binding motif protein, X-linked-like-2 [Mus musculus]
gi|12838734|dbj|BAB24311.1| unnamed protein product [Mus musculus]
Length = 385
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AARDMNGKSLDGKAIKVAQATK 86
>gi|327286673|ref|XP_003228054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Anolis carolinensis]
Length = 374
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AARDMNGKSLDGKAIKVEQATK 86
>gi|326426702|gb|EGD72272.1| U1 small nuclear ribonucleoprotein 70 kDa [Salpingoeca sp. ATCC
50818]
Length = 305
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V L +D +D+ + E +G ++ + + RD SG+PRG+ F++F D
Sbjct: 102 DAYKTLFVGRLNYDVTEDDLLKEMESYGKVRQVAVVRDKISGKPRGYAFVEFEHERDMRA 161
Query: 99 AKRHMDGQVLLGRELTVVF 117
A R+ DG L GR + V F
Sbjct: 162 AYRYADGMRLNGRRIVVDF 180
>gi|255539555|ref|XP_002510842.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223549957|gb|EEF51444.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 331
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 86/192 (44%), Gaps = 30/192 (15%)
Query: 43 SLLVRNLR-HDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V N H R +D+ R FE +G I + + R+ F F+Q+ DDA +A
Sbjct: 55 TLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRN--------FAFVQYESQDDATKALE 106
Query: 102 HMDGQVLLGRELTVVFA-------------EENRKKPSDMRARERGRGR--FRRRSPPPR 146
+ L+ R ++V +A + R + D R+ +R R +RR P
Sbjct: 107 ATNMSKLMDRVISVEYAVRDDDERRNGYSPDRGRDRSPDRRSHDRKRSSSPYRRERGSPD 166
Query: 147 YSRSPPP----RYARSPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPRG 202
Y R P P R SP YGR SP P +R+ R+ +G+ SR P D RG
Sbjct: 167 YGRGPSPGPYRRERASPDYGRRRSPSPYKRD--RASPDYGRASSRSPYRRERPGSDHGRG 224
Query: 203 RSRSPHRGQRQS 214
SRSP+ +R S
Sbjct: 225 SSRSPYHRERAS 236
>gi|327275957|ref|XP_003222738.1| PREDICTED: hypothetical protein LOC100559599 [Anolis carolinensis]
Length = 439
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V + +D +RR FE +G IK IY+ + +SG+PRG+ FI++ D
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYMVYNKHSGKPRGYAFIEYEHERDMHS 159
Query: 99 AKRHMDGQVLLGRELTV 115
A +H DG+ + GR + V
Sbjct: 160 AYKHADGKKIDGRRVLV 176
>gi|148710225|gb|EDL42171.1| RNA binding motif protein, X chromosome, isoform CRA_b [Mus
musculus]
Length = 301
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|148237346|ref|NP_001084981.1| RNA-binding motif protein, X chromosome [Xenopus laevis]
gi|82236857|sp|Q6IRQ4.1|RBMX_XENLA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|47682580|gb|AAH70649.1| MGC82187 protein [Xenopus laevis]
Length = 370
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G + ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R ++G+ L G+ + V E KPS
Sbjct: 65 AARELNGKALDGKPIKV----EQATKPS 88
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 10 PPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIK 69
P GGG+ R ++ R R G + +L V NL + ++ F + G+I
Sbjct: 340 PANNQQGGGFQDRAQA---RARSFGDQSSPESDTLFVGNLPFSANEDSVQELFGEKGSIV 396
Query: 70 DIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
I LP D SG P+GFG++QF D+A EA ++G L GR + + F+
Sbjct: 397 GIRLPTDPDSGRPKGFGYVQFASVDEAREAFNSLNGAELDGRPVRLDFS 445
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L + NL + + +R+ FE FG + + + D SG RGFG++++V DAA+A +
Sbjct: 260 ANLFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAYK 319
Query: 102 HMDGQVLLGRELTVVFA 118
L GR++ + +A
Sbjct: 320 AKKDTELDGRKINLDYA 336
>gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human
Length = 437
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|344247055|gb|EGW03159.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 384
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|428165567|gb|EKX34559.1| hypothetical protein GUITHDRAFT_119306 [Guillardia theta CCMP2712]
Length = 259
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL C ++ F +FG ++ + + R + GE RGFGF+ F +P+ A A R
Sbjct: 30 TSLYVANLSFRCNTPELSDVFSKFGKLQSVSVQR-WPHGESRGFGFVNFEDPEAADTAMR 88
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSD 127
+ V+ R +T+ + R KP D
Sbjct: 89 ELQDVVVADRAITI--QKSRRSKPHD 112
>gi|307195189|gb|EFN77173.1| RNA-binding protein with serine-rich domain 1 [Harpegnathos
saltator]
Length = 249
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEA 99
PT + + +L + E I F +G IK + D + + RGF +++F D+A A
Sbjct: 88 PTKIHIGHLTRNVTKEHITEIFSVYGQIKMVDFAMDKLHPNQGRGFAYVEFETADEAENA 147
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPP 144
+HMDG + G+E+T + +P MR G G RR+PP
Sbjct: 148 MKHMDGGQIDGQEITAAPVLLPKPRPLPMRRMSPGMG---RRAPP 189
>gi|255568494|ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 305
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T L V +L R D+ F ++G ++D+ + RDY F++F +P DA +A+
Sbjct: 11 TRLYVGHLASRTRSRDLEYLFSKYGRVRDVDMKRDY--------AFVEFSDPRDADDARY 62
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPP----RYSRSPPPRYAR 157
H+DG+ L G + V FA + RG + R PPP ++ +AR
Sbjct: 63 HLDGKDLDGSRIIVEFA----------KGVPRGSREYLGRGPPPGSGRCFNCGIDGHWAR 112
Query: 158 SPSYGRDYSPPPR---RRNYSRSVSPHGQNYSRERSYSRSPAYDGP-RGRSRSPHRGQRQ 213
G + R R + R+ + R RSYSRSP+ P RGRSRSP + +
Sbjct: 113 DCKAGDWKNKCYRCGERGHIERNCKNSPKKLKRGRSYSRSPS---PRRGRSRSPSYSRGR 169
Query: 214 SWSPSRSRTPKRNHSV---SRSRSRSPR 238
S+S SRS PKR S RS SR P+
Sbjct: 170 SYSRSRSPPPKRERSFENEDRSLSREPK 197
>gi|449475372|ref|XP_002190325.2| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Taeniopygia guttata]
Length = 284
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYS- 79
R+ RSPSPR PT + V L + + I F +G IK I +P D +
Sbjct: 128 RKRRSPSPR-----------PTKVHVGRLTRNVTKDHIMEIFSTYGKIKMIDMPVDRLNP 176
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ +++F PDDA +A +HMDG + G+E+T
Sbjct: 177 HLSKGYAYVEFENPDDAEKALKHMDGGQIDGQEITAT 213
>gi|149015798|gb|EDL75122.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_a [Rattus norvegicus]
Length = 306
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|50552784|ref|XP_503802.1| YALI0E10989p [Yarrowia lipolytica]
gi|49649671|emb|CAG79393.1| YALI0E10989p [Yarrowia lipolytica CLIB122]
Length = 345
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L D D+ + +FG +K + + RD SG+ G+GF++F E DD +A +
Sbjct: 120 TLFVARLAFDVTENDLEEHYIKFGPVKHVRIVRDLKSGKSNGYGFVEFQEEDDFRKAFQM 179
Query: 103 MDGQVLLGRELTV 115
+G ++ GR++ V
Sbjct: 180 TNGSIIKGRKVVV 192
>gi|312370835|gb|EFR19148.1| hypothetical protein AND_22983 [Anopheles darlingi]
Length = 553
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L + + +D +RR FE +G IK I + D SG+PRG+ FI++ D A +H
Sbjct: 233 TLFIARINYDTSESKLRREFEMYGNIKKIIMINDKNSGKPRGYAFIEYEHERDMHAAYKH 292
Query: 103 MDGQVLLGRELTV 115
DG+ + G+ + V
Sbjct: 293 ADGKKIDGKRVLV 305
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L ++NL D + +R FE FG I + RD G+ +GFGF+ F PD+A +A
Sbjct: 333 VNLYIKNLEDDVDDDKLRAEFEPFGTITSCKVMRDE-KGQSKGFGFVCFSSPDEATKAVA 391
Query: 102 HMDGQVLLGRELTVVFAE--ENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSP 159
M+ +++ + L V A+ E R++ + + +R + R ++ + + P Y P
Sbjct: 392 EMNNKMIGTKPLYVSLAQRREVRRQQLESQIAQRNQIRMQQAA-----AAGLPGSYVNGP 446
Query: 160 SY 161
Y
Sbjct: 447 LY 448
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T+L V+NL + ++ F+++G + + D G+ +GFGF+ F D+A +A
Sbjct: 230 TNLYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDE-EGKSKGFGFVNFETHDEAQKAVD 288
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMR 129
++ L G++L V A++ ++ ++R
Sbjct: 289 ELNDFELKGKKLFVSRAQKKAEREEELR 316
>gi|427788187|gb|JAA59545.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 449
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V + +D +RR FE FG IK I + + +G+PRG+ F+++ D A +H
Sbjct: 103 TLFVARINYDTSESKLRREFEVFGPIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYKH 162
Query: 103 MDGQVLLGRELTV 115
DG+ + GR + V
Sbjct: 163 ADGKKIDGRRVLV 175
>gi|114052629|ref|NP_001040075.1| RNA-binding motif protein, X chromosome [Bos taurus]
gi|119907483|ref|XP_001250252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Bos
taurus]
gi|109892459|sp|Q29RT0.1|RBMX_BOVIN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|88954147|gb|AAI14041.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Bos
taurus]
gi|296480068|tpg|DAA22183.1| TPA: RNA binding motif protein, X-linked [Bos taurus]
Length = 396
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF FI F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A R M+G+ L G+ + V A
Sbjct: 65 AVRDMNGKSLDGKAIKVAQA 84
>gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio]
Length = 277
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F +FG I ++ L +D + + RGF F+ + P DA +
Sbjct: 5 DRPGKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPSDAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AAREMNGKPLDGKPIKVEQATK 86
>gi|195568088|ref|XP_002107586.1| GD17555 [Drosophila simulans]
gi|194204997|gb|EDX18573.1| GD17555 [Drosophila simulans]
Length = 631
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSG-EPRGFGFIQFVEPDDAAEAKRH 102
L ++ L I F FGA+ + P D + G + RG+ F+++ P+D A A +H
Sbjct: 464 LHIKGLTRQVTKAHITEIFGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPEDCANAIKH 523
Query: 103 MDGQVLLGRELTVVFAEENRKK 124
M+G + G+ + V +EN K
Sbjct: 524 MNGGQIDGKLIRVSAFQENMLK 545
>gi|367038789|ref|XP_003649775.1| hypothetical protein THITE_2108702 [Thielavia terrestris NRRL 8126]
gi|346997036|gb|AEO63439.1| hypothetical protein THITE_2108702 [Thielavia terrestris NRRL 8126]
Length = 325
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + +I R FE++G ++ + RD +SGE RGFGF++ + + A A
Sbjct: 71 SNLFVTGIHPRIEESEITRLFEKYGEVEKCQIMRDPHSGESRGFGFVKMMTSEQADAAME 130
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+++ GR L + A
Sbjct: 131 GLRGEIIEGRTLNIEKA 147
>gi|339240627|ref|XP_003376239.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316975057|gb|EFV58516.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 294
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L +D +RR FE +G IK IY+ D +G+ RG+ FI++ D A +H
Sbjct: 103 TLFVARLSYDTTETKLRREFEVYGPIKKIYMITDIITGKSRGYAFIEYEHEADMHAAYKH 162
Query: 103 MDGQVLLGRELTV 115
DG+ + R + V
Sbjct: 163 ADGKKIDKRRVLV 175
>gi|291384550|ref|XP_002708825.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 359
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNPETDEKALEAAFGKYGRIIEVLLMKDRETSKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A R M+G+ L G+ + V A
Sbjct: 65 AARDMNGKSLDGKAIKVAQA 84
>gi|408391231|gb|EKJ70611.1| hypothetical protein FPSE_09121 [Fusarium pseudograminearum CS3096]
Length = 348
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ + FE++G ++ + RD ++ E RGFGF++ V D A AK
Sbjct: 74 SNLFVTGIHPKLSEAEVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSDQAEAAKE 133
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+ + GR L++ A
Sbjct: 134 GLQGEQIEGRTLSIEKA 150
>gi|259155082|ref|NP_001158783.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
gi|223647384|gb|ACN10450.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
Length = 290
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLDTETNEKALEKHFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTV 115
A R M+G+ L G+ + V
Sbjct: 65 AAREMNGKSLDGKPIKV 81
>gi|332211654|ref|XP_003254929.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Nomascus
leucogenys]
Length = 393
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AARDMNGKSLDGKAIKVAQATK 86
>gi|46110044|ref|XP_382080.1| hypothetical protein FG01904.1 [Gibberella zeae PH-1]
Length = 342
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ + FE++G ++ + RD ++ E RGFGF++ V D A AK
Sbjct: 74 SNLFVTGIHPKLSEAEVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSDQAEAAKE 133
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+ + GR L++ A
Sbjct: 134 GLQGEQIEGRTLSIEKA 150
>gi|71027799|ref|XP_763543.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350496|gb|EAN31260.1| nucleic acid binding factor, putative [Theileria parva]
Length = 421
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEP 93
GR R +P L V + + +R F QFG + D+Y+P+D ++ + +GFGFI F
Sbjct: 331 NGRDRSIP-KLFVGRIAFETSVHSLRTYFSQFGEVIDVYIPKDPHTQKGKGFGFITFANK 389
Query: 94 DDAAEAKRHMDGQVLLGRELTVVFAE 119
+ A V+ GRE+ V +A+
Sbjct: 390 NSIHSALDPSLKHVVDGREIIVDYAD 415
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPR-DYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+ + + + +D+ F++FG + D Y PR + YSG +GFGFI F E +D+
Sbjct: 120 IFITRIAFEATKDDLEDYFKKFGTVYDAYCPRQNNYSGLNKGFGFISF-ENEDSIRKVFE 178
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARE 132
V++GRE+ V A + SD + E
Sbjct: 179 SGPHVIMGREVIVDRATGTKYHSSDYKRLE 208
>gi|389627542|ref|XP_003711424.1| hypothetical protein MGG_07511 [Magnaporthe oryzae 70-15]
gi|351643756|gb|EHA51617.1| hypothetical protein MGG_07511 [Magnaporthe oryzae 70-15]
Length = 324
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ R FE++G ++ + RD ++ E RGFGF++ V D A AK
Sbjct: 78 SNLFVTGIHPRLTEAEVTRMFEKYGEVEKCQIMRDPHTRESRGFGFVKMVTSDQADAAKE 137
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+ L GR L++ A
Sbjct: 138 GLQGEELEGRTLSIEKA 154
>gi|448878228|gb|AGE46077.1| arginine/serine-rich splicing factor SCL30 transcript III [Zea
mays]
Length = 84
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSG 80
SLLVRN+ R ED+R PFE+FG ++D+Y+P+DYYSG
Sbjct: 39 SLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSG 76
>gi|154280022|ref|XP_001540824.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412767|gb|EDN08154.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 311
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + D+ R FE++G ++ + D ++ E RGFGF++ V + A AK
Sbjct: 72 SNLFVTGIHPRLTESDVSRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 131
Query: 102 HMDGQVLLGRELTV 115
+ G+V+ GR L++
Sbjct: 132 GLQGEVIEGRTLSI 145
>gi|444730998|gb|ELW71366.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Tupaia chinensis]
Length = 194
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L+ + + + F ++G I ++ L +D+ + RGF F+ F P DA +
Sbjct: 5 DHPGKLFIGELKTETNEKALEAIFGKYGRIVEVLLMKDHEINKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|240279660|gb|EER43165.1| transformer-SR ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325092793|gb|EGC46103.1| transformer-SR ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 315
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + D+ R FE++G ++ + D ++ E RGFGF++ V + A AK
Sbjct: 72 SNLFVTGIHPRLTESDVSRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 131
Query: 102 HMDGQVLLGRELTV 115
+ G+V+ GR L++
Sbjct: 132 GLQGEVIEGRTLSI 145
>gi|225562846|gb|EEH11125.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 319
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + D+ R FE++G ++ + D ++ E RGFGF++ V + A AK
Sbjct: 72 SNLFVTGIHPRLTESDVSRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 131
Query: 102 HMDGQVLLGRELTV 115
+ G+V+ GR L++
Sbjct: 132 GLQGEVIEGRTLSI 145
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L ++NL D E +R FE FG I + RD S +GFGF+ F PD+A +A
Sbjct: 328 VNLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRDDKSTS-KGFGFVCFSSPDEATKAVA 386
Query: 102 HMDGQVLLGRELTVVFAE--ENRKKPSDMRARERGRGRFRRRS 142
M+ +++ + L V A+ E R++ + + +R + R ++ +
Sbjct: 387 EMNNKMIGSKPLYVSLAQRREVRRQQLESQIAQRNQIRMQQAA 429
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T+L ++NL ++ F+++G + + D G +GFGF+ + ++A A
Sbjct: 225 TNLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDE-EGNSKGFGFVNYEHHEEAQSAVD 283
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMR 129
+ + G++L V A++ ++ ++R
Sbjct: 284 ALHDTDIRGKKLFVSRAQKKAEREEELR 311
>gi|148684912|gb|EDL16859.1| mCG120440 [Mus musculus]
Length = 366
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 36 DRPGKLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKA 95
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A R M+G+ L G+ + V A
Sbjct: 96 AARDMNGKSLDGKAIKVAQA 115
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V + +D + ++R FEQ+G+IK + L D +G+PRG+GFI+F D EA ++
Sbjct: 99 TLFVGGISYDTTEKKLKREFEQYGSIKRVRLIYDR-NGKPRGYGFIEFENDRDMKEAYKN 157
Query: 103 MDGQVLLGRELTV 115
DG+ + GR + V
Sbjct: 158 ADGKKIDGRRVLV 170
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L ++NL D E +R+ FE FG+I + RD G +GFGF+ F PD+A +A
Sbjct: 332 VNLYIKNLEDDIDDERLRQEFEPFGSITSAKVMRDE-KGTSKGFGFVCFSSPDEATKAVA 390
Query: 102 HMDGQVLLGRELTVVFAE--ENRKKPSDMRARERGRGRFRRRS 142
M+ +++ + L V A+ E R++ + + +R + R ++ +
Sbjct: 391 EMNNKMIGSKPLYVSLAQRREVRRQQLESQIAQRNQIRMQQAA 433
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T++ V+NL + +D + FEQFG + + D G+ RGFGF+ F ++A +A
Sbjct: 229 TNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDE-QGQSRGFGFVNFETHEEAQKAVE 287
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMR 129
+ GR+L V A++ ++ ++R
Sbjct: 288 TLHDSEYHGRKLFVSRAQKKAEREEELR 315
>gi|2625130|gb|AAB86639.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
Length = 388
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I +I L +D + + RGF F+ P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AARDMNGKSLDGKAIKVEQATK 86
>gi|395743087|ref|XP_003780683.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein,
X-linked-like-2 [Pongo abelii]
Length = 392
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKALEAEFGKYGHIVEVLLMKDRETNKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AARDMNGKSLDGKAIKVAQATK 86
>gi|296217449|ref|XP_002755014.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Callithrix
jacchus]
Length = 394
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AVRDMNGKTLDGKAIKVAQATK 86
>gi|123907333|sp|Q28E41.1|RNPS1_XENTR RecName: Full=RNA-binding protein with serine-rich domain 1
gi|89271940|emb|CAJ83719.1| RNA binding protein S1, serine-rich domain [Xenopus (Silurana)
tropicalis]
Length = 309
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSPR PT + + L + + I F +G IK I +P D Y+
Sbjct: 154 RKRRSPSPR-----------PTKVHIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHP 202
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
+G+ +++F P++A +A +HMDG + G+E+T
Sbjct: 203 HLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITA 238
>gi|293346666|ref|XP_002726404.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 441
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I +I L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
R M+G+ L G+ + V E KPS
Sbjct: 65 VARDMNGKSLDGKAIKV----EQATKPS 88
>gi|147906110|ref|NP_001090114.1| RNA-binding protein with serine-rich domain 1-B [Xenopus laevis]
gi|123900402|sp|Q3KPW1.1|RNP1B_XENLA RecName: Full=RNA-binding protein with serine-rich domain 1-B
gi|76779600|gb|AAI06520.1| MGC131270 protein [Xenopus laevis]
Length = 283
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSPR PT + + L + + I F +G IK I +P D Y+
Sbjct: 128 RKRRSPSPR-----------PTKVHIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHP 176
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
+G+ +++F P++A +A +HMDG + G+E+T
Sbjct: 177 HLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITA 212
>gi|197100753|ref|NP_001125414.1| transformer-2 protein homolog beta [Pongo abelii]
gi|55727979|emb|CAH90742.1| hypothetical protein [Pongo abelii]
Length = 288
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 27 SPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGF 85
S R R+ G R P L V L D+R F ++G I D+ + D S RGF
Sbjct: 102 STRRRHVGNRANPDPNCCLGVFGLSSYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGF 161
Query: 86 GFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENR 122
F+ F DDA EAK +G L GR + V F+ R
Sbjct: 162 AFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 198
>gi|115449133|ref|NP_001048346.1| Os02g0788300 [Oryza sativa Japonica Group]
gi|47497761|dbj|BAD19861.1| putative initiation factor 3g [Oryza sativa Japonica Group]
gi|113537877|dbj|BAF10260.1| Os02g0788300 [Oryza sativa Japonica Group]
gi|125541408|gb|EAY87803.1| hypothetical protein OsI_09222 [Oryza sativa Indica Group]
gi|125583953|gb|EAZ24884.1| hypothetical protein OsJ_08662 [Oryza sativa Japonica Group]
Length = 289
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%)
Query: 23 GRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEP 82
G+ P+ R R R+ S+ V NL D R ED+R F FG + Y+ D+ +GE
Sbjct: 189 GKYVPPKPRESEMRRRNDENSVRVTNLSEDTREEDLRELFGSFGPLTRAYVALDHRTGES 248
Query: 83 RGFGFIQFVEPDDAAEAKRHMDG 105
RGFGF+ FV +DA A ++G
Sbjct: 249 RGFGFLSFVYREDAERAIAKLNG 271
>gi|62859713|ref|NP_001015956.1| RNA-binding protein with serine-rich domain 1 [Xenopus (Silurana)
tropicalis]
gi|110645317|gb|AAI18692.1| ribonucleic acid binding protein S1 [Xenopus (Silurana) tropicalis]
Length = 284
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSPR PT + + L + + I F +G IK I +P D Y+
Sbjct: 129 RKRRSPSPR-----------PTKVHIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHP 177
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
+G+ +++F P++A +A +HMDG + G+E+T
Sbjct: 178 HLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITA 213
>gi|440912647|gb|ELR62200.1| Heterogeneous nuclear ribonucleoprotein G, partial [Bos grunniens
mutus]
Length = 206
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF FI F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFA-----EENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPP 153
A R M+G+ L G+ + V A E R+ P +R RGRG R R +
Sbjct: 65 AVRDMNGKSLDGKAIKVAQATKPAFESGRRGPP--LSRSRGRGYSSRDYSSARDA----- 117
Query: 154 RYARSPSYGRDYSPPPRRRNY 174
RD++P PR Y
Sbjct: 118 ---------RDFAPSPREYTY 129
>gi|431891348|gb|ELK02224.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 278
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|147901029|ref|NP_001088379.1| RNA-binding protein with serine-rich domain 1-A [Xenopus laevis]
gi|82233407|sp|Q5XG24.1|RNP1A_XENLA RecName: Full=RNA-binding protein with serine-rich domain 1-A
gi|54038322|gb|AAH84646.1| LOC495230 protein [Xenopus laevis]
Length = 283
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSPR PT + + L + + I F +G IK I +P D Y+
Sbjct: 128 RKRRSPSPR-----------PTKVHIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHP 176
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
+G+ +++F P++A +A +HMDG + G+E+T
Sbjct: 177 HLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITA 212
>gi|116197981|ref|XP_001224802.1| hypothetical protein CHGG_07146 [Chaetomium globosum CBS 148.51]
gi|88178425|gb|EAQ85893.1| hypothetical protein CHGG_07146 [Chaetomium globosum CBS 148.51]
Length = 374
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + +I R FE++G ++ + +D +SGE RGFGF++ V + A A
Sbjct: 70 SNLFVTGIHPRLEESEITRLFEKYGEVEKCQIMKDPHSGESRGFGFVKMVTSEMADAAIE 129
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+V+ GR L + A
Sbjct: 130 GLRGEVIEGRTLNIEKA 146
>gi|344282129|ref|XP_003412827.1| PREDICTED: transformer-2 protein homolog beta-like [Loxodonta
africana]
Length = 390
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 27 SPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGF 85
S R R+ G R P L V L D+R F ++G I D+ + D S RGF
Sbjct: 196 STRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGF 255
Query: 86 GFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENR 122
F+ F DDA EAK +G L GR + V F+ R
Sbjct: 256 AFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 292
>gi|119608862|gb|EAW88456.1| RNA binding motif protein, X-linked, isoform CRA_b [Homo sapiens]
Length = 221
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
A R M+G+ L G+ + V E KPS
Sbjct: 65 AARDMNGKSLDGKAIKV----EQATKPS 88
>gi|384499197|gb|EIE89688.1| hypothetical protein RO3G_14399 [Rhizopus delemar RA 99-880]
Length = 276
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
S++V NL + + E ++ FEQFG I I P D G +I F +DA +A +
Sbjct: 39 SIVVSNLTRNVKEEHVKEIFEQFGKITYIKFPLDKEFNINLGKAYIDFETQEDAEKAISY 98
Query: 103 M-DGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSP-------PPR 154
M + Q+ R LT F + R + S + R R+ S PPRY R P R
Sbjct: 99 MHNAQLDGAR-LTCAFPSKERSR-SPVSPPPRAAARY---SSPPRYRRDSYRGPPRRPER 153
Query: 155 YARSPSYGRDYSPPPRR 171
+ R Y R +PPPRR
Sbjct: 154 FGRGRRYSRSITPPPRR 170
>gi|357518361|ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L ++ I+R FE +GAIK + L D S +PRG+ FI+++ D A +
Sbjct: 136 TLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQ 195
Query: 103 MDGQVLLGRELTV 115
DG+ + GR + V
Sbjct: 196 ADGRKIEGRRVLV 208
>gi|392347178|ref|XP_003749751.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 446
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I +I L +D + + RGF F+ F P DA +
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKD 64
Query: 99 AKRHMDGQVLLGRELTVVFAEENRKKPS 126
R M+G+ L G+ + V E KPS
Sbjct: 65 VARDMNGKSLDGKAIKV----EQATKPS 88
>gi|388518723|gb|AFK47423.1| unknown [Medicago truncatula]
Length = 340
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 15/150 (10%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L ++ + F G + D++L D ++ E RGFGF+ ++A ++
Sbjct: 46 NLYVTGLSPRITKRELEKHFSAKGKVVDVHLVVDPWTRESRGFGFVTMDTLEEADRCVKY 105
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYG 162
++ VL GR +TV A R + + + G R R P YS PR RSPSY
Sbjct: 106 LNRSVLEGRVITVEKARRRRGR-TPTPGKYLGLKTIRGRRRSPSYS----PR--RSPSYS 158
Query: 163 RDYSPPPRRRNYSRSVSPHGQNYSRERSYS 192
P RR+Y+R SP+ ++SR RSYS
Sbjct: 159 ------PYRRSYNR--SPYSSDHSRSRSYS 180
>gi|448878202|gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays]
Length = 293
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 43/64 (67%)
Query: 56 EDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
+D+ FE++G + D+++PRD +G+ RGF F+++ D+A +A +DG+ + GR + V
Sbjct: 67 DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMV 126
Query: 116 VFAE 119
FA+
Sbjct: 127 QFAK 130
>gi|8576316|gb|AAC24858.2| testes specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
gi|119589071|gb|EAW68665.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 392
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AARDMNGKSLDGKAIKVAQATK 86
>gi|224106315|ref|XP_002314126.1| predicted protein [Populus trichocarpa]
gi|222850534|gb|EEE88081.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L +++ + F G + D++L D ++ E RGFGF+ ++A ++
Sbjct: 53 NLYVTGLSPRITKKELEKHFSAEGTVIDVHLVVDPWTRESRGFGFVTMSTVEEADHCIKY 112
Query: 103 MDGQVLLGRELTVVFAEENR-KKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSY 161
+D VL GR +TV A+ R + P+ R R R +P RSP R
Sbjct: 113 LDRSVLEGRVITVEKAKRKRGRTPTPGRYLGLRTIRVHRWTPSNSPYRSPSHSPLRRSRS 172
Query: 162 -----------GRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGP---RGRSRSP 207
R YSP R RS SP+ N+ R S SRSP P RS SP
Sbjct: 173 RSPRYSSERNRNRSYSPCYHRH---RSYSPYYYNHHRYLSRSRSPYSTSPVSRHDRSYSP 229
Query: 208 HRGQRQSWSPSRSRTPKRNHSVSRSRSRSP---RREYS 242
+ + +SP R +R+H S SRS +P RR YS
Sbjct: 230 YYSRH--YSPD-DRYYRRHHYCSVSRSPTPCRARRSYS 264
>gi|153252068|ref|NP_055284.3| RNA-binding motif protein, X-linked-like-2 [Homo sapiens]
gi|229462965|sp|O75526.3|HNRGT_HUMAN RecName: Full=RNA-binding motif protein, X-linked-like-2; AltName:
Full=Testis-specific heterogeneous nuclear
ribonucleoprotein G-T; Short=hnRNP G-T
Length = 392
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AARDMNGKSLDGKAIKVAQATK 86
>gi|335775542|gb|AEH58607.1| transformer-2 protein-like protein beta-like protein [Equus
caballus]
Length = 275
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 27 SPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGF 85
S R R+ G R P L V L D+R F ++G I D+ + D S RGF
Sbjct: 89 STRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGF 148
Query: 86 GFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENR 122
F+ F DDA EAK +G L GR + V F+ R
Sbjct: 149 AFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 185
>gi|350534520|ref|NP_001233578.1| RNA-binding motif protein, X-linked-like-2 [Pan troglodytes]
gi|343958222|dbj|BAK62966.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Pan
troglodytes]
gi|343961837|dbj|BAK62506.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Pan
troglodytes]
Length = 392
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AARDMNGKSLDGKAIKVAQATK 86
>gi|221039872|dbj|BAH11699.1| unnamed protein product [Homo sapiens]
Length = 256
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 34 LFVRNLANTVTEEILEKAFSQFGKLERVEKLKDY--------AFIHFDERDGAVKAMEEM 85
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 86 NGKDLEGENIEIVFA-----KPPDQKRKER 110
>gi|302845893|ref|XP_002954484.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
gi|300260156|gb|EFJ44377.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
Length = 393
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+++V L +D + +RR FE+FG IK + + D G+PRG+ FI+F D EA +
Sbjct: 152 TIIVARLSYDVTDKKLRREFEEFGPIKRVRIVTDK-QGKPRGYAFIEFEHKADMKEAYKA 210
Query: 103 MDGQVLLGRELTV 115
DG+ + GR + V
Sbjct: 211 ADGKKIEGRRVLV 223
>gi|41944563|gb|AAH65953.1| RNA binding protein S1, serine-rich domain [Danio rerio]
Length = 283
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSP+ PT L + L + + I+ F +G IK I +P D +
Sbjct: 127 RKRRSPSPK-----------PTKLYLGRLTRNVTKDHIQEIFATYGKIKMIDMPSDRLHP 175
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ ++++ P+DA +A +HMDG + G+E+T
Sbjct: 176 NVSKGYAYVEYESPEDAQKALKHMDGGQIDGQEITAT 212
>gi|45201218|ref|NP_986788.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|74691820|sp|Q74ZS6.1|PABP_ASHGO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|44986072|gb|AAS54612.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|374110037|gb|AEY98942.1| FAGR122Cp [Ashbya gossypii FDAG1]
Length = 585
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 18/130 (13%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V+NL E ++ F FG I + RD +G RGFGF+ F P++A +A
Sbjct: 322 VNLFVKNLDDSIDDEKLKEEFAPFGTITSAKVMRDE-TGNSRGFGFVCFSTPEEATKAIT 380
Query: 102 HMDGQVLLGRELTVVFAE--ENRKKPSDMRARERGRGRFRRRS---------------PP 144
+ Q++ G+ L V A+ E R+ + + R + RF+ + PP
Sbjct: 381 EKNQQIVAGKPLYVAIAQRKEVRRNQLAQQIQARNQMRFQHANAAAAAAVAGLPGQFMPP 440
Query: 145 PRYSRSPPPR 154
P Y PPR
Sbjct: 441 PMYYGGIPPR 450
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T++ V+N+ + E+ F ++G I L +D G+ RGFGF+ F + AA+A
Sbjct: 219 TNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDS-EGKLRGFGFVNFEDHAAAAKAVD 277
Query: 102 HMDGQVLLGRELTV 115
++ G++L V
Sbjct: 278 ELNELEFKGQKLYV 291
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
++ ++NL + + F FG I + D +G RGFGF+ F DA +A
Sbjct: 127 NIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDE-NGVSRGFGFVHFENESDARDAIEA 185
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF 138
+DG ++ +E+ V + + S + E + +F
Sbjct: 186 VDGMLMNDQEVYVALHVSKKDRQSKL---EEVKAKF 218
>gi|221112062|ref|XP_002166415.1| PREDICTED: uncharacterized protein LOC100209098 [Hydra
magnipapillata]
Length = 257
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
+ + L D ++ R FE G ++D+++ R+ P GFGFI F +P DA +A R M
Sbjct: 4 IFIGGLPEDASRTELEREFECIGRLRDVWVARN-----PPGFGFIIFEDPRDAEDAVREM 58
Query: 104 DGQVLLGRELTVVFA 118
DG+ + G + V A
Sbjct: 59 DGKKICGSRIRVELA 73
>gi|74194008|dbj|BAE36923.1| unnamed protein product [Mus musculus]
Length = 368
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 85 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 136
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 137 NGKDLEGENIEIVFA-----KPPDQKRKER 161
>gi|193657247|ref|XP_001947021.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 397
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V + +D +RR FE +G IK I + R+ G+PRG+ FI++ D A ++
Sbjct: 103 TLFVARINYDTSESKLRREFELYGLIKKIVVTRNKIDGKPRGYAFIEYENERDMYSAYKY 162
Query: 103 MDGQVLLGRELTV 115
DG+ + GR + V
Sbjct: 163 ADGKKIDGRRVLV 175
>gi|195482425|ref|XP_002102041.1| GE17950 [Drosophila yakuba]
gi|194189565|gb|EDX03149.1| GE17950 [Drosophila yakuba]
Length = 709
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSG-EPRGFGFIQFVEPDDAAEAKRH 102
L ++ L E I F FGA+ + P D + G RG+ F+++ P+D A A +H
Sbjct: 534 LHIKGLTRQVTKEHITEIFGHFGALTAVDFPMDRFQGRHGRGYAFVEYSRPEDCACAIKH 593
Query: 103 MDGQVLLGRELTV-VFAEENRKKP 125
M+G + G+ + V F E K P
Sbjct: 594 MNGGQIDGKRIRVSAFQESMLKAP 617
>gi|158257974|dbj|BAF84960.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A R M+G+ L G+ + V A
Sbjct: 65 AARDMNGKSLDGKAIKVAQA 84
>gi|84468434|dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L ++ I+R FE +GAIK + L D S +PRG+ FI+++ D A +
Sbjct: 140 TLFVARLSYETTESRIKREFESYGAIKRVRLVTDTESNKPRGYAFIEYLHTRDMKAAYKQ 199
Query: 103 MDGQVLLGRELTV 115
DG+ + GR + V
Sbjct: 200 ADGRKIEGRRVLV 212
>gi|302765773|ref|XP_002966307.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
gi|300165727|gb|EFJ32334.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
Length = 289
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TS+ V L +D + IR FE+FG I + + +D+ G+ RG+GFI F + A A
Sbjct: 7 TSVYVGGLAYDVTEDLIRSTFEEFGEIDKVKIIQDH-DGQSRGYGFITFATSEAANGAIY 65
Query: 102 HMDGQVLLGRELTV 115
M+G+V+ GR + V
Sbjct: 66 GMNGKVVAGRSIRV 79
>gi|426367314|ref|XP_004050678.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Gorilla
gorilla gorilla]
Length = 392
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AARDMNGKSLDGKAIKVAQATK 86
>gi|223944069|gb|ACN26118.1| unknown [Zea mays]
gi|413956219|gb|AFW88868.1| hypothetical protein ZEAMMB73_204329 [Zea mays]
Length = 315
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L D+ + F G + D + D ++ E RGFGF+ DA ++
Sbjct: 41 NLYVTGLSARVTDRDLEKHFSTEGEVIDASVVYDPWTRESRGFGFVTMAAVKDADRCIKY 100
Query: 103 MDGQVLLGRELTVVFAEENRKK---PSDMRARERGRGRFRRRSPPP----RYSRSPPPRY 155
+D VL GR +TV A+ R + P + RGR S P RYS P
Sbjct: 101 LDRSVLQGRVITVEKAKRRRGRTPTPGKYLGTKSSRGRRYSTSYSPDRRGRYSSRYSP-- 158
Query: 156 ARSPSYGRD--YSPPPRRRNYSRSVSPHGQN 184
R +GRD YSP RRR+Y SP+G++
Sbjct: 159 DRRDCHGRDRSYSPYDRRRSY----SPYGRD 185
>gi|115443899|ref|NP_001045729.1| Os02g0122800 [Oryza sativa Japonica Group]
gi|41053015|dbj|BAD07946.1| putative arginine/serine-rich splicing factor RSp41 [Oryza sativa
Japonica Group]
gi|113535260|dbj|BAF07643.1| Os02g0122800 [Oryza sativa Japonica Group]
gi|215768223|dbj|BAH00452.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 279
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 45/200 (22%)
Query: 43 SLLVRNLR-HDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V N + R D+ R F+Q+G I ++ + R+ F F+Q+ +DA +A
Sbjct: 96 TLFVINFDPINTRTRDLERHFDQYGKISNVRIRRN--------FAFVQYELQEDATKALE 147
Query: 102 HMDGQVLLGRELTVVFA-EENRKKPSDMRARERGRGR------FRRRSPPPRYSRS---P 151
+G L+ R ++V +A ++ +K + RGR R +R RS P Y R
Sbjct: 148 GTNGSTLMDRVISVEYALRDDDEKRNGYSPERRGRDRSPDRRDYRGRSASP-YGRGRERG 206
Query: 152 PPRYAR-----SPSYGR--DYSPPPRRRNYSRSVSPHG-----------QNYSRERSYSR 193
P Y R SP YGR D P +Y R SP G NY RER +
Sbjct: 207 SPDYGRGRERGSPDYGRGGDRGSP----DYHRGASPQGGNKGDERGSPPNNYDRERREA- 261
Query: 194 SPAYDGPRGRSRSPHRGQRQ 213
SP YD P RSRSP R +R+
Sbjct: 262 SPGYDRP--RSRSPARYERE 279
>gi|51468002|ref|NP_001003875.1| U1 small nuclear ribonucleoprotein 70 kDa [Danio rerio]
gi|49619089|gb|AAT68129.1| U1 small ribonucleoprotein 70kd [Danio rerio]
Length = 495
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V + +D +RR FE +G IK IY+ + +G+PRG+ FI++ D
Sbjct: 100 DAFKTLFVARINYDTTESKLRREFEVYGPIKRIYIVYNKKTGKPRGYAFIEYEHERDMHS 159
Query: 99 AKRHMDGQVLLGRELTV 115
A +H DG+ + GR + V
Sbjct: 160 AYKHADGKKIDGRRVLV 176
>gi|55742374|ref|NP_001006878.1| splicing factor, arginine/serine-rich 10 [Xenopus (Silurana)
tropicalis]
gi|49903569|gb|AAH77018.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog)
[Xenopus (Silurana) tropicalis]
Length = 293
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 27 SPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGF 85
S R R+ G R P L V L D+R F ++G I D+ + D S RGF
Sbjct: 106 STRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPISDVSIVYDQQSRRSRGF 165
Query: 86 GFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENR 122
F+ F DDA EAK +G L GR + V F+ R
Sbjct: 166 SFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 202
>gi|222622077|gb|EEE56209.1| hypothetical protein OsJ_05182 [Oryza sativa Japonica Group]
Length = 290
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 45/200 (22%)
Query: 43 SLLVRNLR-HDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V N + R D+ R F+Q+G I ++ + R+ F F+Q+ +DA +A
Sbjct: 107 TLFVINFDPINTRTRDLERHFDQYGKISNVRIRRN--------FAFVQYELQEDATKALE 158
Query: 102 HMDGQVLLGRELTVVFA-EENRKKPSDMRARERGRGR------FRRRSPPPRYSRS---P 151
+G L+ R ++V +A ++ +K + RGR R +R RS P Y R
Sbjct: 159 GTNGSTLMDRVISVEYALRDDDEKRNGYSPERRGRDRSPDRRDYRGRSASP-YGRGRERG 217
Query: 152 PPRYAR-----SPSYGR--DYSPPPRRRNYSRSVSPHG-----------QNYSRERSYSR 193
P Y R SP YGR D P +Y R SP G NY RER +
Sbjct: 218 SPDYGRGRERGSPDYGRGGDRGSP----DYHRGASPQGGNKGDERGSPPNNYDRERREA- 272
Query: 194 SPAYDGPRGRSRSPHRGQRQ 213
SP YD P RSRSP R +R+
Sbjct: 273 SPGYDRP--RSRSPARYERE 290
>gi|261859212|dbj|BAI46128.1| RNA binding motif protein, X-linked-like 2 [synthetic construct]
Length = 392
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AVRDMNGKSLDGKAIKVAQATK 86
>gi|440468942|gb|ELQ38069.1| hypothetical protein OOU_Y34scaffold00552g23 [Magnaporthe oryzae
Y34]
gi|440480554|gb|ELQ61213.1| hypothetical protein OOW_P131scaffold01198g45 [Magnaporthe oryzae
P131]
Length = 415
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ R FE++G ++ + RD ++ E RGFGF++ V D A AK
Sbjct: 84 SNLFVTGIHPRLTEAEVTRMFEKYGEVEKCQIMRDPHTRESRGFGFVKMVTSDQADAAKE 143
Query: 102 HMDGQVLLGRELTV 115
+ G+ L GR L++
Sbjct: 144 GLQGEELEGRTLSI 157
>gi|322695665|gb|EFY87469.1| transformer-SR ribonucleoprotein [Metarhizium acridum CQMa 102]
Length = 328
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ + FE++G ++ + RD +S E RGFGF++ V + A AK
Sbjct: 75 SNLFVTGIHPRLTEAEVSKMFEKYGDVEKCQIMRDPHSKESRGFGFVKMVTSEQAEAAKE 134
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+ + GR L++ A
Sbjct: 135 GLQGEQIEGRTLSIEKA 151
>gi|302897832|ref|XP_003047724.1| hypothetical protein NECHADRAFT_72372 [Nectria haematococca mpVI
77-13-4]
gi|256728655|gb|EEU42011.1| hypothetical protein NECHADRAFT_72372 [Nectria haematococca mpVI
77-13-4]
Length = 333
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + ++ + FE++G ++ + RD ++ E RGFGF++ V + A AK
Sbjct: 74 SNLFVTGIHPKLTEAEVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSEQAEAAKE 133
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+ + GR L++ A
Sbjct: 134 GLQGEQIEGRTLSIEKA 150
>gi|342879144|gb|EGU80408.1| hypothetical protein FOXB_09084 [Fusarium oxysporum Fo5176]
Length = 345
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 7 TPSPPPRGSGGGYGRRGRSPSPRGRYGGGRGRDLPTS-------------LLVRNLRHDC 53
+ SP PR G RR SP G +G +D+ S L V +
Sbjct: 29 SASPRPRDDNEGSRRRSASP---GGHGDSNMKDVSASRDDDDGAINPGSNLFVTGIHPKL 85
Query: 54 RPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGREL 113
++ + FE++G ++ + RD ++ E RGFGF++ V + A AK + G+ + GR L
Sbjct: 86 SEAEVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSEQAEAAKEGLQGEQIEGRTL 145
Query: 114 TVVFA 118
++ A
Sbjct: 146 SIEKA 150
>gi|221219360|gb|ACM08341.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 19/112 (16%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
L + V NL ++ ++ R F +G ++ +++ R+ P GF F++F +P DA +A
Sbjct: 12 LDCKVYVGNLGNNGNKTELERSFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDATDA 66
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSP 151
R +DG+ L G + V + G R R R PPP +SR P
Sbjct: 67 VRELDGRTLSGSRVRVELSN--------------GEKRTRNRGPPPSWSRRP 104
>gi|158286893|ref|XP_565448.3| AGAP006755-PA [Anopheles gambiae str. PEST]
gi|157020685|gb|EAL41962.3| AGAP006755-PA [Anopheles gambiae str. PEST]
Length = 434
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V + +D +RR FE +G IK I + D +G+PRG+ FI++ D A +H
Sbjct: 103 TLFVARINYDTSESKLRREFEIYGNIKKIIMINDKDTGKPRGYAFIEYEHERDMHAAYKH 162
Query: 103 MDGQVLLGRELTV 115
DG+ + G+ + V
Sbjct: 163 ADGKKIDGKRVLV 175
>gi|221221358|gb|ACM09340.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 19/112 (16%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
L + V NL ++ ++ R F +G ++ +++ R+ P GF F++F +P DA +A
Sbjct: 12 LDCKVYVGNLGNNGNKTELERSFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDATDA 66
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSP 151
R +DG+ L G + V + G R R R PPP +SR P
Sbjct: 67 VRELDGRTLSGSRVRVELSN--------------GEKRTRNRGPPPSWSRRP 104
>gi|763157|emb|CAA33777.1| U1RNA-associated 70-kDa protein [Mus musculus]
Length = 378
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V + +D +RR FE +G IK I++ SG+PRG+ FI++ D
Sbjct: 30 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 89
Query: 99 AKRHMDGQVLLGRELTV 115
A +H DG+ + GR + V
Sbjct: 90 AYKHADGKKIDGRRVLV 106
>gi|402894334|ref|XP_003910320.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Papio
anubis]
Length = 394
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A R M+G+ L G+ + V A
Sbjct: 65 AARDMNGKSLDGKAIKVAQA 84
>gi|291224590|ref|XP_002732284.1| PREDICTED: RNA-binding protein S1, serine-rich domain-like
[Saccoglossus kowalevskii]
Length = 261
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
PT L + L + + + F +G +K + L D + RGF +I F DDA +A
Sbjct: 120 PTKLHIGRLTRNVNRDHLLEIFSTYGKVKTVELQVDRMTNLSRGFAYIDFENHDDADKAM 179
Query: 101 RHMDGQVLLGRELTVVFA 118
+HMDG + G+E+T
Sbjct: 180 KHMDGGQIDGQEITAAMI 197
>gi|41054291|ref|NP_956055.1| RNA-binding protein with serine-rich domain 1 [Danio rerio]
gi|82237740|sp|Q6PG31.1|RNPS1_DANRE RecName: Full=RNA-binding protein with serine-rich domain 1
gi|34785364|gb|AAH57251.1| RNA binding protein S1, serine-rich domain [Danio rerio]
Length = 283
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSP+ PT L + L + + I+ F +G IK I +P D +
Sbjct: 127 RKRRSPSPK-----------PTKLYLGRLTRNVTKDHIQEIFATYGKIKMIDMPSDRLHP 175
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ ++++ P+DA +A +HMDG + G+E+T
Sbjct: 176 NVSKGYAYVEYESPEDAQKALKHMDGGQIDGQEITAT 212
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L ++NL E ++ F FG I + + +D +G RGFGF+ F P++A +A
Sbjct: 322 VNLFIKNLDDSIDDEKLKDEFAPFGTITSVKVMKDE-AGSSRGFGFVCFSTPEEATKAIT 380
Query: 102 HMDGQVLLGRELTVVFAE--ENRKKPSDMRARERGRGRFRRRS---------------PP 144
+ Q++ G+ L V A+ E R+ + + R + RF+ + PP
Sbjct: 381 EKNQQLVAGKPLYVAIAQRKEVRRNQLAQQIQARNQMRFQHANAAAAAAVAGLPGQFIPP 440
Query: 145 PRYSRSPPPR 154
P Y PPR
Sbjct: 441 PMYYGGIPPR 450
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T++ V+N+ + E+ + F ++G I L +D G+ RGFGFI F + AA A
Sbjct: 219 TNIYVKNIDLETSQEEFEQLFSKYGKITSAVLEKDS-EGKLRGFGFINFEDHSTAARAVD 277
Query: 102 HMDGQVLLGRELTV 115
++ G+ L V
Sbjct: 278 ELNESDFRGQTLYV 291
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
++ ++NL + + F FG I + D +G RGFGF+ F DA +A
Sbjct: 127 NIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDD-NGVSRGFGFVHFENESDARDAIEA 185
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRF 138
++G ++ +E+ V + + + S + E + +F
Sbjct: 186 VNGMLMNDQEVYVAWHVSKKDRQSKL---EEVKAKF 218
>gi|47229936|emb|CAG10350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 243
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 27 SPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGF 85
S R R+ G R P S L V L D+R F ++G + D+ + D S RGF
Sbjct: 64 SNRRRHIGNRANPDPNSCLGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGF 123
Query: 86 GFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENR 122
F+ F +D+ EAK H +G L GR + V ++ R
Sbjct: 124 AFVYFENSEDSKEAKEHANGMELDGRRIRVDYSITKR 160
>gi|291414608|ref|XP_002723548.1| PREDICTED: RNA-binding protein S1, serine-rich domain-like
[Oryctolagus cuniculus]
Length = 305
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSP+ PT + + L + + I F +G IK I +P D +
Sbjct: 151 RKRRSPSPK-----------PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVDRMHP 199
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ +++F PD+A +A +HMDG + G+E+T
Sbjct: 200 HLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
>gi|119609847|gb|EAW89441.1| splicing factor, arginine/serine-rich 2, isoform CRA_b [Homo
sapiens]
Length = 208
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 13/77 (16%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
TSL V NL + P+ + Y+PRD Y+ E RGF F++F + DA +A
Sbjct: 14 TSLKVDNLTYRTSPDTV-------------YIPRDRYTKESRGFAFVRFHDKRDAEDAMD 60
Query: 102 HMDGQVLLGRELTVVFA 118
MDG VL GREL V A
Sbjct: 61 AMDGAVLDGRELRVQMA 77
>gi|25145017|ref|NP_497276.2| Protein RNP-5 [Caenorhabditis elegans]
gi|351065877|emb|CCD61878.1| Protein RNP-5 [Caenorhabditis elegans]
Length = 289
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEAKRH 102
++++NL + + F +GAIK++ LP D +++ RG+G++++ +DA ++ +H
Sbjct: 135 VVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKH 194
Query: 103 MDGQVLLGRELTVVFAEENRKKP---SDMRARERGRGRFRRRSPPPRYSRSPPPRYARSP 159
MDG + G + V + P R R R SP R RSPPP RSP
Sbjct: 195 MDGGQIDGMAVHVEMTIGRQSVPFQRRSSPFRRRSPPPRDRMSPMRRGGRSPPPHRRRSP 254
Query: 160 SYGR 163
GR
Sbjct: 255 MGGR 258
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L ++NL D E +R FE FGAI + R G +GFGF+ F PD+A +A
Sbjct: 336 VNLYIKNLEDDVDDEKLRDAFEPFGAITSAKVMRTE-GGTSKGFGFVCFSSPDEATKAVA 394
Query: 102 HMDGQVLLGRELTVVFAE--ENRKKPSDMRARERGRGRFRRRSPP--PRYSRSPPPRY 155
M+ +++ + L V A+ E R++ + + +R + R ++ + P +PP Y
Sbjct: 395 EMNNKMMGSKPLYVSLAQRREVRRQQLESQIAQRNQIRMQQAAAAGMPAGYMNPPMYY 452
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T++ V+N+ + ++ R F FG + L RD G RGFGF+ F ++A +A
Sbjct: 233 TNVYVKNIDPEANDDEFRELFTPFGNVTSAVLQRDE-EGRSRGFGFVNFETHEEAQKAVD 291
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMR 129
+ GR+L V A++ ++ ++R
Sbjct: 292 TLHDSDFKGRKLFVSRAQKKSEREEELR 319
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 34/190 (17%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T L V +L R D+ F ++G ++D+ + RDY F++F +P DA +A+
Sbjct: 11 TRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRDY--------AFVEFSDPRDADDARH 62
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPP----RYSRSPPPRYAR 157
++DG+ G + V FA + RG + R PPP ++ +AR
Sbjct: 63 YLDGKDFDGSRIIVEFA----------KGVPRGSREYLGRGPPPGSGRCFNCGIDGHWAR 112
Query: 158 SPSYGRDYSPPPRRRNYSRSVSPHGQN-----YSRERSYSRSPAYDGPRGRSRSPHRGQR 212
G D+ R + + +N R RSYSRSP RS SPHRG+
Sbjct: 113 DCKAG-DWKNKCYRCGERGHIERNCKNSPKKLTKRGRSYSRSP------DRSPSPHRGRS 165
Query: 213 QSWSPSRSRT 222
+S S SR R+
Sbjct: 166 RSPSYSRGRS 175
>gi|395815171|ref|XP_003781108.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Otolemur
garnettii]
Length = 393
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGLNPETDEKALEAAFGKYGRIVEVLLMKDRETSKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A R M+G+ L G+ + V A
Sbjct: 65 AARDMNGKSLDGKAIKVAQA 84
>gi|328875106|gb|EGG23471.1| RNA recognition motif-containing protein RRM [Dictyostelium
fasciculatum]
Length = 439
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 71/165 (43%), Gaps = 26/165 (15%)
Query: 22 RGRSPSPRGRYGG------------GRGRDLPTS-LLVRNLRHDCRPEDIRRPFEQFGAI 68
R RSPSP G G R R+ S L V L + E++ F FG +
Sbjct: 272 RNRSPSPSGARNGENSNGQAMDKSRSRSREFSLSPLRVDRLTPNVSKENLIEIFSTFGKV 331
Query: 69 KDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEE-------- 120
KD+ + D S +P G ++ F D+ AK+++DG + G + V F +
Sbjct: 332 KDVEIMYDRKSNQPTGIAYVTFFIKDERNRAKKYLDGGEIDGTVVGVRFLKHFSNNNYRG 391
Query: 121 NRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYGRDY 165
R M RG GR RR PPR +R RY+ SP G D+
Sbjct: 392 GRGGGGKMDNYNRGGGRNRRPYSPPRGAR----RYS-SPQRGGDH 431
>gi|348538876|ref|XP_003456916.1| PREDICTED: hypothetical protein LOC100701048 [Oreochromis
niloticus]
Length = 470
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V + +D +RR FE +G IK IY+ + +G+PRG+ FI++ D
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYIVYNKKTGKPRGYAFIEYEHERDMHS 159
Query: 99 AKRHMDGQVLLGRELTV 115
A +H DG+ + GR + V
Sbjct: 160 AYKHADGKKIDGRRVLV 176
>gi|56759496|gb|AAW27888.1| SJCHGC02308 protein [Schistosoma japonicum]
Length = 203
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 3/150 (2%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
+ V L +D I+R + FG I +I + ++ +G+PRG+ F++F D A + +
Sbjct: 1 MFVARLNYDTTESKIKRELDAFGRINNIVMVKNVITGKPRGYCFVEFEHERDMHAAVKAL 60
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSYGR 163
+G+ + G + V E R +P D R R G+G + R P S R PS R
Sbjct: 61 NGRKIDGARV-VTDVERGRTRP-DWRPRRLGKGLGKNRQGPSDKSHRKHEN-GREPSRDR 117
Query: 164 DYSPPPRRRNYSRSVSPHGQNYSRERSYSR 193
+ Y ++ +R RS S+
Sbjct: 118 SLVELSQVHTYVIAIKSTNDGGARSRSKSK 147
>gi|432871355|ref|XP_004071924.1| PREDICTED: uncharacterized protein LOC101174750 [Oryzias latipes]
Length = 469
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V + +D +RR FE +G IK IY+ + +G+PRG+ FI++ D
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYIVYNKGTGKPRGYAFIEYEHERDMHS 159
Query: 99 AKRHMDGQVLLGRELTV 115
A +H DG+ + GR + V
Sbjct: 160 AYKHADGKKIDGRRVLV 176
>gi|82400144|gb|ABB72811.1| putative arginine/serine-rich protein [Solanum tuberosum]
Length = 392
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
+ V L + ++ F FG I + L D+ P+GF +++F DA +A+ HM
Sbjct: 112 IHVDQLSRNVNENHLKEIFGNFGEILHVQLAIDHVVNLPKGFAYVEFKTRIDAEKAQLHM 171
Query: 104 DGQVLLGRELTVVFAEENRKK 124
DG + G+ + F RKK
Sbjct: 172 DGAQIDGKVVHARFTLPERKK 192
>gi|8927581|gb|AAF82129.1|AF279289_1 testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 386
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAK 100
P L + L + + + F ++G I ++ L +D + + RGF F+ F P DA A
Sbjct: 1 PGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAV 60
Query: 101 RHMDGQVLLGRELTVVFAEE 120
R M+G+ L G+ + V A +
Sbjct: 61 RDMNGKSLDGKAIKVAQATK 80
>gi|195108129|ref|XP_001998645.1| GI24086 [Drosophila mojavensis]
gi|193915239|gb|EDW14106.1| GI24086 [Drosophila mojavensis]
Length = 382
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEA 99
P + V L + + + F FG IK++ P D Y+ RG ++++ +D A
Sbjct: 226 PVRIHVGRLTRNVTKDHVMEIFSSFGTIKNVEFPTDRYHPNFGRGMAYVEYATAEDCESA 285
Query: 100 KRHMDGQVLLGRELTV 115
+HMDG + G+E+TV
Sbjct: 286 MKHMDGGQIDGQEITV 301
>gi|348578330|ref|XP_003474936.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 3
[Cavia porcellus]
Length = 533
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 250 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 301
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 302 NGKDLEGENIEIVFA-----KPPDQKRKER 326
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G I D+ L D +G RG+ F+ F + A EA K
Sbjct: 72 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 131
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 132 LYNNHEIRSGKHIGVCISVAN 152
>gi|303276150|ref|XP_003057369.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
gi|226461721|gb|EEH59014.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
Length = 472
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L +D +RR FEQ+G +K + + D +G+PRG+ FI++ D A +
Sbjct: 195 TLFVGRLSYDVDESKLRREFEQWGPVKSVRVVEDVETGKPRGYAFIEYNRESDMKTAYKQ 254
Query: 103 MDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRR 141
DG+ + + + VV AE R P D + R G G R R
Sbjct: 255 ADGRRIENKRV-VVDAERGRTVP-DWKPRRLGGGLGRTR 291
>gi|33416526|gb|AAH55863.1| Syncrip protein, partial [Mus musculus]
Length = 667
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 384 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 435
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 436 NGKDLEGENIEIVFA-----KPPDQKRKER 460
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G I D+ L D +G RG+ F+ F + A EA K
Sbjct: 206 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 265
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 266 LYNNHEIRSGKHIGVCISVAN 286
>gi|328769422|gb|EGF79466.1| hypothetical protein BATDEDRAFT_89771 [Batrachochytrium
dendrobatidis JAM81]
Length = 327
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L D + ++ FE FG +K + + +D +G+PRG+ FI+F D A +
Sbjct: 101 TLFVSRLSFDTTEKTLKHEFEAFGEVKSVSIVKDLKTGKPRGYAFIEFEHERDMKIAYKD 160
Query: 103 MDGQVLLGRELTV 115
+G + GR + V
Sbjct: 161 AEGLKIDGRRILV 173
>gi|15986735|gb|AAL11726.1|AF408434_1 RRM RNA binding protein NSAP1 [Mus musculus]
Length = 558
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 275 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 326
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 327 NGKDLEGENIEIVFA-----KPPDQKRKER 351
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G I D+ L D +G RG+ F+ F + A EA K
Sbjct: 97 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 156
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 157 LYNNHEIRSGKHIGVCISVAN 177
>gi|388855334|emb|CCF50998.1| related to NSR1-nuclear localization sequence binding protein
[Ustilago hordei]
Length = 452
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L + NL D +D+ F + G + + LP+D SG P+GFG+++F + AA A
Sbjct: 278 STLFIGNLSFDITEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAAAAID 337
Query: 102 HMDGQVLLGRELTVVFA 118
M GQ L GR L + F+
Sbjct: 338 AMTGQELAGRPLRLDFS 354
>gi|444729721|gb|ELW70128.1| Heterogeneous nuclear ribonucleoprotein Q [Tupaia chinensis]
Length = 659
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 376 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 427
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 428 NGKDLEGENIEIVFA-----KPPDQKRKER 452
>gi|426353899|ref|XP_004044412.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Gorilla
gorilla gorilla]
Length = 464
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 242 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 293
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 294 NGKDLEGENIEIVFA-----KPPDQKRKER 318
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G I D+ L D +G RG+ F+ F + A EA K
Sbjct: 64 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 123
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 124 LYNNHEIRSGKHIGVCISVAN 144
>gi|392495108|gb|AFM74217.1| U1 small nuclear ribonucleoprotein 70 kD [Spirometra
erinaceieuropaei]
Length = 297
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V L +D +RR F+ +G IK I + +D +G+PRG+ FI+F D A +
Sbjct: 101 NTLFVARLNYDTSEHKLRREFDVYGPIKRISMIKDIATGKPRGYAFIEFEHERDMHAANK 160
Query: 102 HMDGQVLLG-RELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSR 149
+ + + G R LT + E R +P D R R G+G + RS P SR
Sbjct: 161 DANNRKIDGHRILTDI--ERGRTRP-DWRPRRLGKGLGKSRSGPSDSSR 206
>gi|410898649|ref|XP_003962810.1| PREDICTED: transformer-2 protein homolog beta-like [Takifugu
rubripes]
Length = 277
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 27 SPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGF 85
S R R+ G R P + L V L D+R F ++G + D+ + D S RGF
Sbjct: 98 SNRRRHIGNRANPDPNNCLGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGF 157
Query: 86 GFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENR 122
F+ F +D+ EAK H +G L GR + V F+ R
Sbjct: 158 AFVYFETSEDSKEAKEHANGMELDGRRIRVDFSITKR 194
>gi|116786163|gb|ABK24003.1| unknown [Picea sitchensis]
Length = 289
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 93/222 (41%), Gaps = 55/222 (24%)
Query: 43 SLLVRNLR-HDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V N +D R D+ R FE +G + ++ + R+ F FI + ++A +A
Sbjct: 97 TLFVINFDPYDTRARDLERHFEPYGKVLNVRIRRN--------FAFIHYGTQEEATKAFD 148
Query: 102 HMDGQVLLGRELTVVFAEEN----RKKPSD-MRARERGR-----GRFRRRSP-------- 143
LL R +TV +A+ R PS +R GR GR R SP
Sbjct: 149 ATHMSTLLDRVITVEYAQREDGNRRGGPSSPIRGGRYGRSSEDHGRDRSASPIYGRRAMR 208
Query: 144 -PPRYSRSPPPRYAR-----SPSYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAY 197
P Y R+P P YAR SP YGR SP YSR HG +Y R + SP Y
Sbjct: 209 GSPDYGRAPSPTYARRPERCSPDYGRATSPI-----YSRRPEKHGSDYGR----AASPVY 259
Query: 198 DGPRGRSRSPHRGQRQSWSPSRSRTPKRNHSVSRSRSRSPRR 239
R Q+ S R +P + R RSRSP R
Sbjct: 260 ---------ASRPQKNSLDYGRDASPL----LERDRSRSPVR 288
>gi|449298839|gb|EMC94854.1| hypothetical protein BAUCODRAFT_149939 [Baudoinia compniacensis UAMH
10762]
Length = 2038
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 56 EDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTV 115
++I R FE++GA++ + RD ++ E RGFGF++ P++A AK + G+V GR L++
Sbjct: 1839 DEITRLFEKYGAVEKCNIMRDPHTRESRGFGFVKMTTPEEADAAKDGLQGEVYEGRTLSI 1898
>gi|350408062|ref|XP_003488289.1| PREDICTED: hypothetical protein LOC100745820 [Bombus impatiens]
Length = 326
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEA 99
PT + + +L + E I F +G IK + D + + RGF +++F D+A A
Sbjct: 165 PTKIHIGHLTRNVTKEHIMEIFSTYGQIKMVDFAMDKLHPNQGRGFAYVEFETADEAENA 224
Query: 100 KRHMDGQVLLGRELTVV 116
+HMDG + G+E+T
Sbjct: 225 MKHMDGGQIDGQEITAA 241
>gi|340721860|ref|XP_003399332.1| PREDICTED: hypothetical protein LOC100646991 [Bombus terrestris]
Length = 326
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEA 99
PT + + +L + E I F +G IK + D + + RGF +++F D+A A
Sbjct: 165 PTKIHIGHLTRNVTKEHIMEIFSTYGQIKMVDFAMDKLHPNQGRGFAYVEFETADEAENA 224
Query: 100 KRHMDGQVLLGRELTVV 116
+HMDG + G+E+T
Sbjct: 225 MKHMDGGQIDGQEITAA 241
>gi|355722853|gb|AES07708.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Mustela
putorius furo]
Length = 698
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 442 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 493
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 494 NGKDLEGENIEIVFA-----KPPDQKRKER 518
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G I D+ L D +G RG+ F+ F + A EA K
Sbjct: 264 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 323
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 324 LYNNHEIRSGKHIGVCISVAN 344
>gi|441629223|ref|XP_003269806.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Nomascus
leucogenys]
Length = 350
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V + +D +RR FE +G IK I++ SG+PRG+ FI++ D
Sbjct: 13 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 72
Query: 99 AKRHMDGQVLLGRELTV 115
A +H DG+ + GR + V
Sbjct: 73 AYKHADGKKIDGRRVLV 89
>gi|390479248|ref|XP_002762385.2| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa-like [Callithrix jacchus]
Length = 575
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V + +D +RR FE +G IK I++ SG+PRG+ FI++ D
Sbjct: 237 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 296
Query: 99 AKRHMDGQVLLGRELTV 115
A +H DG+ + GR + V
Sbjct: 297 AYKHADGKKIDGRRVLV 313
>gi|383848638|ref|XP_003699955.1| PREDICTED: uncharacterized protein LOC100878282 [Megachile
rotundata]
Length = 325
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEA 99
PT + + +L + E I F +G IK + D + + RGF +++F D+A A
Sbjct: 165 PTKIHIGHLTRNVTKEHIMEIFSTYGQIKMVDFAMDKLHPNQGRGFAYVEFETADEAENA 224
Query: 100 KRHMDGQVLLGRELTVV 116
+HMDG + G+E+T
Sbjct: 225 MKHMDGGQIDGQEITAA 241
>gi|223648918|gb|ACN11217.1| Heterogeneous nuclear ribonucleoprotein Q [Salmo salar]
Length = 619
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY F+ F E D A +A M
Sbjct: 351 LFVRNLANSVTEEILEKSFSQFGKLERVKKLKDY--------AFVHFDERDAAVKALAQM 402
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+VL G + +VFA KP D + +ER
Sbjct: 403 NGKVLEGEHIDIVFA-----KPPDQKRKER 427
>gi|114145636|ref|NP_001041381.1| heterogeneous nuclear ribonucleoprotein Q [Rattus norvegicus]
gi|44888314|sp|Q7TP47.1|HNRPQ_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein Q;
Short=hnRNP Q; AltName: Full=Liver regeneration-related
protein LRRG077; AltName: Full=Synaptotagmin-binding,
cytoplasmic RNA-interacting protein
gi|33086582|gb|AAP92603.1| Ab2-339 [Rattus norvegicus]
Length = 533
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 250 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 301
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 302 NGKDLEGENIEIVFA-----KPPDQKRKER 326
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G I D+ L D +G RG+ F+ F + A EA K
Sbjct: 72 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 131
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 132 LYNNHEIRSGKHIGVCISVAN 152
>gi|417412066|gb|JAA52448.1| Putative heteroproteinous nuclear ribonucleoprotein r rrm
superfamily, partial [Desmodus rotundus]
Length = 638
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 355 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 406
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 407 NGKDLEGENIEIVFA-----KPPDQKRKER 431
>gi|326519182|dbj|BAJ96590.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 290
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++L V + D+ R FE++G ++ + D ++ E RGFGF++ V + A AK
Sbjct: 68 SNLFVTGIHPRLTEGDVSRLFEKYGDVESCSIMLDPHTKESRGFGFVKMVTTEQAEAAKE 127
Query: 102 HMDGQVLLGRELTVVFA 118
+ G+ + GR L++ A
Sbjct: 128 GLQGETIEGRTLSIEKA 144
>gi|81074820|gb|ABB55376.1| putative arginine/serine-rich protein-like [Solanum tuberosum]
Length = 392
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 17/125 (13%)
Query: 13 RGSGGGYGRRGRS-------------PSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIR 59
R S G +RGRS P PR R + L RN+ + ++
Sbjct: 72 RKSPAGVSKRGRSPPPPPPPESKKASPPPRKVSPIPESRVIHVDQLSRNVNEN----HLK 127
Query: 60 RPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAE 119
F FG I + L D+ P+GF +++F DA +A+ HMDG + G+ + F
Sbjct: 128 EIFGNFGEILHVQLAIDHVVNLPKGFAYVEFKTRIDAEKAQLHMDGAQIDGKVVHARFTL 187
Query: 120 ENRKK 124
RKK
Sbjct: 188 PERKK 192
>gi|345326438|ref|XP_003431044.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q
[Ornithorhynchus anatinus]
Length = 588
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 356
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 357 NGKDLEGENIEIVFA-----KPPDQKRKER 381
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G+I D+ L D +G RG+ F+ F + A EA K
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGSIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 222 LYNNHEIRSGKHIGVCISVAN 242
>gi|110761026|ref|XP_624099.2| PREDICTED: hypothetical protein LOC551707 [Apis mellifera]
gi|380015571|ref|XP_003691773.1| PREDICTED: uncharacterized protein LOC100871217 [Apis florea]
Length = 326
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEA 99
PT + + +L + E I F +G IK + D + + RGF +++F D+A A
Sbjct: 165 PTKIHIGHLTRNVTKEHIMEIFSTYGQIKMVDFAMDKLHPNQGRGFAYVEFETADEAENA 224
Query: 100 KRHMDGQVLLGRELTVV 116
+HMDG + G+E+T
Sbjct: 225 MKHMDGGQIDGQEITAA 241
>gi|334324402|ref|XP_003340516.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Monodelphis
domestica]
Length = 588
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 356
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 357 NGKDLEGENIEIVFA-----KPPDQKRKER 381
>gi|228008396|ref|NP_001153145.1| heterogeneous nuclear ribonucleoprotein Q isoform 2 [Homo sapiens]
gi|332218415|ref|XP_003258351.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|345778173|ref|XP_003431697.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Canis lupus familiaris]
gi|358413804|ref|XP_003582661.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Bos taurus]
gi|359068807|ref|XP_003586521.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Bos taurus]
gi|426234732|ref|XP_004011346.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Ovis aries]
gi|119569008|gb|EAW48623.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_b [Homo sapiens]
gi|221042908|dbj|BAH13131.1| unnamed protein product [Homo sapiens]
gi|380783243|gb|AFE63497.1| heterogeneous nuclear ribonucleoprotein Q isoform 6 [Macaca
mulatta]
Length = 464
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 242 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 293
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 294 NGKDLEGENIEIVFA-----KPPDQKRKER 318
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G I D+ L D +G RG+ F+ F + A EA K
Sbjct: 64 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 123
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 124 LYNNHEIRSGKHIGVCISVAN 144
>gi|326512990|dbj|BAK03402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
T L V +L R +D+ F ++G I+ + L DY GF++F P DA +A+
Sbjct: 39 TKLYVGHLSTHTRTKDVEYLFGRYGRIRCVELKHDY--------GFVEFSNPRDADDARY 90
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPP----RYSRSPPPRYAR 157
+DGQ + G + V FA + P R + R PPP ++ +AR
Sbjct: 91 ELDGQDVDGSRIIVEFARGTPRGPGGSR-------EYLGRGPPPGSGRCFNCGIDGHWAR 143
Query: 158 SPSYGRDYSPPPRRRNYSRSVSPHGQ----NYSRERSYSRSP 195
+ G D+ R + + Q N R RSYSRSP
Sbjct: 144 DCNAG-DWKNKCYRCGEKGHIEKNCQNSPKNLKRGRSYSRSP 184
>gi|194897890|ref|XP_001978743.1| GG19755 [Drosophila erecta]
gi|190650392|gb|EDV47670.1| GG19755 [Drosophila erecta]
Length = 749
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSG-EPRGFGFIQFVEPDDAAEAKRH 102
L ++ L E + F FG + + P D Y G + RG+ F+++ P+D A A +H
Sbjct: 572 LHIKGLTRQVTKEHVTEIFGHFGPLTAVDFPMDRYQGRQGRGYAFVEYSRPEDCASAIKH 631
Query: 103 MDGQVLLGRELTV-VFAEENRKKP 125
M+G + G+ + V F E K P
Sbjct: 632 MNGGQIDGKRIRVSAFQESMLKAP 655
>gi|119569012|gb|EAW48627.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_e [Homo sapiens]
Length = 588
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 356
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 357 NGKDLEGENIEIVFA-----KPPDQKRKER 381
>gi|149637545|ref|XP_001510103.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Ornithorhynchus anatinus]
Length = 623
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G+I D+ L D +G RG+ F+ F + A EA K
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGSIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 222 LYNNHEIRSGKHIGVCISVAN 242
>gi|395534549|ref|XP_003769303.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Sarcophilus
harrisii]
Length = 605
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|126310303|ref|XP_001366745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Monodelphis domestica]
Length = 623
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|35505506|gb|AAH57796.1| RNA binding motif protein, X-linked-like 2 [Homo sapiens]
Length = 392
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + + + + F ++G I ++ L +D + + RGF F+ F P DA
Sbjct: 5 DRPGKLFIGGFNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFAEE 120
A R M+G+ L G+ + V A +
Sbjct: 65 AARDMNGKSLDGKAIKVAQATK 86
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L ++ I+R FE +G IK + L D +G+P+G+ FI+++ D A +
Sbjct: 139 TLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQ 198
Query: 103 MDGQVLLGRELTV 115
DG+ + GR + V
Sbjct: 199 ADGRKIDGRRVLV 211
>gi|426353905|ref|XP_004044415.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Gorilla
gorilla gorilla]
Length = 623
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|3037013|gb|AAC12926.1| Gry-rbp [Homo sapiens]
gi|15809586|gb|AAK59703.1| hnRNP Q3 [Homo sapiens]
Length = 623
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|15809588|gb|AAK59704.1| hnRNP Q2 [Homo sapiens]
Length = 588
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 356
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 357 NGKDLEGENIEIVFA-----KPPDQKRKER 381
>gi|387019387|gb|AFJ51811.1| Transformer-2 protein [Crotalus adamanteus]
Length = 187
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 27 SPRGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGF 85
S R R+ G R P L V L D+R F ++G I D+ + D S RGF
Sbjct: 2 STRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGF 61
Query: 86 GFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENR 122
F+ F DDA EAK +G L GR + V F+ R
Sbjct: 62 AFVYFESVDDAKEAKERANGMELDGRRIRVDFSITKR 98
>gi|189069313|dbj|BAG36345.1| unnamed protein product [Homo sapiens]
Length = 623
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|228008295|ref|NP_001153147.1| heterogeneous nuclear ribonucleoprotein Q isoform 4 [Homo sapiens]
gi|297678606|ref|XP_002817155.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Pongo abelii]
gi|301775587|ref|XP_002923214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 4
[Ailuropoda melanoleuca]
gi|332218421|ref|XP_003258354.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|332824482|ref|XP_518621.3| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Pan
troglodytes]
gi|348578332|ref|XP_003474937.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 4
[Cavia porcellus]
gi|426234738|ref|XP_004011349.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 6
[Ovis aries]
gi|296484069|tpg|DAA26184.1| TPA: synaptotagmin binding, cytoplasmic RNA interacting protein
isoform 1 [Bos taurus]
Length = 588
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 356
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 357 NGKDLEGENIEIVFA-----KPPDQKRKER 381
>gi|344264675|ref|XP_003404417.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Loxodonta africana]
Length = 585
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 302 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 353
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 354 NGKDLEGENIEIVFA-----KPPDQKRKER 378
>gi|6899884|emb|CAB71893.1| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana]
Length = 271
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 24/191 (12%)
Query: 43 SLLVRNLR-HDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V N + DI + FE +G + ++ + R+ F F+QF +DA +A
Sbjct: 94 TLFVINFDPIRTKEHDIEKHFEPYGKVTNVRIRRN--------FSFVQFETQEDATKALE 145
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSY 161
+L R ++V +A ++ + D R GR RRS P Y R P P Y R PS
Sbjct: 146 ATQRSKILDRVVSVEYALKDDDERDD-----RNGGRSPRRSLSPVYRRRPSPDYGRRPSP 200
Query: 162 GRDYSPPPRRRNYSRSVSPHGQNYSRERSYS--RSPAYDGPRGRSRSPHRGQRQSWSPSR 219
G+ P P +Y R+ SP Y +Y RSP Y GR RS G+++S R
Sbjct: 201 GQGRRPSP---DYGRARSPEYDRYKGPAAYERRRSPDY----GR-RSSDYGRQRSPGYDR 252
Query: 220 SRTPKRNHSVS 230
R+PKR ++
Sbjct: 253 YRSPKRKTLIN 263
>gi|395857936|ref|XP_003801336.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 4
[Otolemur garnettii]
Length = 588
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 356
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 357 NGKDLEGENIEIVFA-----KPPDQKRKER 381
>gi|344264671|ref|XP_003404415.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Loxodonta africana]
Length = 620
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 337 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 388
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 389 NGKDLEGENIEIVFA-----KPPDQKRKER 413
>gi|307170261|gb|EFN62621.1| RNA-binding protein with serine-rich domain 1 [Camponotus
floridanus]
Length = 338
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEA 99
PT + + +L + E + F +G IK + D + + RGF +++F D+A A
Sbjct: 177 PTKIHIGHLTRNVTKEHVMEIFSAYGQIKMVDFAMDKLHPNQGRGFAYVEFDTADEAENA 236
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPP 144
+HMDG + G+E+T + +P MR G G RR PP
Sbjct: 237 MKHMDGGQIDGQEITAAPVLLPKPRPLLMRRMSPGMG---RRMPP 278
>gi|301775589|ref|XP_002923215.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 5
[Ailuropoda melanoleuca]
Length = 626
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 343 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 394
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 395 NGKDLEGENIEIVFA-----KPPDQKRKER 419
>gi|348525304|ref|XP_003450162.1| PREDICTED: RNA-binding protein with serine-rich domain 1-B-like
[Oreochromis niloticus]
Length = 278
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
RR RSP+P+ PT + + L + E I+ F +G IK + +P D +
Sbjct: 122 RRKRSPTPK-----------PTKVYLGRLTRNVTKEHIQEIFSTYGTIKAVDMPMDRLHP 170
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
RG +++F P++A +A +HMDG + G+E+T
Sbjct: 171 HLHRGCAYVEFETPEEAQKALKHMDGGQIDGQEITAC 207
>gi|307104419|gb|EFN52673.1| hypothetical protein CHLNCDRAFT_32442 [Chlorella variabilis]
Length = 164
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 34 GGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEP 93
G+G + T+L V L + F FG IK++ LP D+ +G RGFGF++F
Sbjct: 9 AGKGSNPKTALYVGGLESTVNEAALHSAFIPFGEIKEVSLPLDHATGTHRGFGFVEFEAA 68
Query: 94 DDAAEAKRHMDGQVLLGRELTVVFAEENRKKPSD 127
+DAA+A +M L GR L V +A+ N+ K D
Sbjct: 69 EDAADAMDNMHNSELYGRVLRVNYAQPNKIKGGD 102
>gi|350578257|ref|XP_001927626.3| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1 [Sus
scrofa]
Length = 623
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|91078908|ref|XP_967303.1| PREDICTED: similar to AGAP006755-PA isoform 1 [Tribolium castaneum]
gi|270003669|gb|EFA00117.1| hypothetical protein TcasGA2_TC002933 [Tribolium castaneum]
Length = 408
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V + +D +RR FE +G IK I L + +G+PRG+ FI++ D A +H
Sbjct: 103 TLFVARINYDTSESKLRREFEVYGPIKKIVLIHNSVNGKPRGYAFIEYEHERDMHSAYKH 162
Query: 103 MDGQVLLGRELTV 115
DG+ + GR + V
Sbjct: 163 ADGKKIDGRRVLV 175
>gi|351702127|gb|EHB05046.1| Heterogeneous nuclear ribonucleoprotein Q [Heterocephalus glaber]
Length = 623
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|291230087|ref|XP_002734999.1| PREDICTED: RNA-binding protein, putative-like [Saccoglossus
kowalevskii]
Length = 315
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D T L V +L DC +I R F +FG I ++++ R+ P F F+ + +DA E
Sbjct: 60 DYGTRLYVGDLGIDCSKTEIERSFGRFGKITEVWVARN-----PPCFAFVVYKRREDAEE 114
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A R MDG+++ G + V A
Sbjct: 115 AMREMDGRMVCGGRVRVNIA 134
>gi|228008291|ref|NP_006363.4| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Homo sapiens]
gi|302564259|ref|NP_001180774.1| heterogeneous nuclear ribonucleoprotein Q [Macaca mulatta]
gi|109071945|ref|XP_001089294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 8
[Macaca mulatta]
gi|291396562|ref|XP_002714605.1| PREDICTED: synaptotagmin binding, cytoplasmic RNA interacting
protein isoform 1 [Oryctolagus cuniculus]
gi|301775585|ref|XP_002923213.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 3
[Ailuropoda melanoleuca]
gi|332218419|ref|XP_003258353.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|345778171|ref|XP_532223.3| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Canis lupus familiaris]
gi|348578326|ref|XP_003474934.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 1
[Cavia porcellus]
gi|358413806|ref|XP_002705232.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1 [Bos
taurus]
gi|359068810|ref|XP_002690247.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1 [Bos
taurus]
gi|395737457|ref|XP_003776919.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Pongo abelii]
gi|397504636|ref|XP_003822890.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3 [Pan
paniscus]
gi|402867572|ref|XP_003897917.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Papio anubis]
gi|403261187|ref|XP_003923009.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Saimiri
boliviensis boliviensis]
gi|426234730|ref|XP_004011345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Ovis aries]
gi|92090361|sp|O60506.2|HNRPQ_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein Q;
Short=hnRNP Q; AltName: Full=Glycine- and tyrosine-rich
RNA-binding protein; Short=GRY-RBP; AltName:
Full=NS1-associated protein 1; AltName:
Full=Synaptotagmin-binding, cytoplasmic RNA-interacting
protein
gi|62897111|dbj|BAD96496.1| synaptotagmin binding, cytoplasmic RNA interacting protein variant
[Homo sapiens]
gi|119569014|gb|EAW48629.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_g [Homo sapiens]
gi|119569015|gb|EAW48630.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_g [Homo sapiens]
gi|261858370|dbj|BAI45707.1| synaptotagmin binding, cytoplasmic RNA interacting protein
[synthetic construct]
gi|281344763|gb|EFB20347.1| hypothetical protein PANDA_012313 [Ailuropoda melanoleuca]
gi|387539924|gb|AFJ70589.1| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Macaca
mulatta]
gi|431838171|gb|ELK00103.1| Heterogeneous nuclear ribonucleoprotein Q [Pteropus alecto]
gi|440903331|gb|ELR54008.1| Heterogeneous nuclear ribonucleoprotein Q [Bos grunniens mutus]
Length = 623
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|209734182|gb|ACI67960.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|221222340|gb|ACM09831.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|303663267|gb|ADM16100.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 172
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 40 LPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA 99
L + V NL + ++ R F +G ++ +++ R+ P GF F++F +P DA +A
Sbjct: 12 LDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARN-----PPGFAFVEFEDPRDATDA 66
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSP 151
R +DG+ L G + V + G R R R PPP +SR P
Sbjct: 67 VRELDGRTLSGCRVRVELSN--------------GEKRTRSRGPPPSWSRRP 104
>gi|397469246|ref|XP_003806272.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like [Pan
paniscus]
Length = 422
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSP+ PT + + L + + I F +G IK I +P + +
Sbjct: 300 RKRRSPSPK-----------PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHP 348
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ +++F PD+A +A +HMDG + G+E+T
Sbjct: 349 HLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 385
>gi|354494910|ref|XP_003509577.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein with
serine-rich domain 1 [Cricetulus griseus]
Length = 305
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSP+ PT + + L + + I F +G IK I +P + +
Sbjct: 151 RKRRSPSPK-----------PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHP 199
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ +++F PD+A +A +HMDG + G+E+T
Sbjct: 200 HLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
>gi|334333581|ref|XP_001367597.2| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Monodelphis domestica]
Length = 305
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSP+ PT + + L + + I F +G IK I +P + +
Sbjct: 151 RKRRSPSPK-----------PTKVHIGRLTKNVTKDHIMEIFSTYGKIKMIDMPAERMHP 199
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ +++F PD+A +A +HMDG + G+E+T
Sbjct: 200 HLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
>gi|602021|emb|CAA29961.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V + +D +RR FE +G IK I++ SG+PRG+ FI++ D
Sbjct: 51 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 110
Query: 99 AKRHMDGQVLLGRELTV 115
A +H DG+ + GR + V
Sbjct: 111 AYKHADGKKIDGRRVLV 127
>gi|56757815|gb|AAW27048.1| SJCHGC02307 protein [Schistosoma japonicum]
Length = 305
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
++ V L +D I+R + FG I +I + ++ +G+PRG+ F++F D A +
Sbjct: 101 NTMFVARLNYDTTESKIKRELDAFGRINNIVMVKNVITGKPRGYCFVEFEHERDMHAAVK 160
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYARSPSY 161
++G+ + G + V E R +P D R R G+G + R P S R
Sbjct: 161 ALNGRKIDGARV-VTDVERGRTRP-DWRPRRLGKGLGKNRQGPSDKSH-------RKHEN 211
Query: 162 GRDYSPPPRRRNYSRSVS 179
GR+ P R R++ R++S
Sbjct: 212 GRE---PSRDRSFGRTIS 226
>gi|383415175|gb|AFH30801.1| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Macaca
mulatta]
gi|384944782|gb|AFI35996.1| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Macaca
mulatta]
gi|410227736|gb|JAA11087.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
gi|410255524|gb|JAA15729.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
gi|410304910|gb|JAA31055.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
Length = 624
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|3694986|gb|AAC62511.1| RRM RNA binding protein GRY-RBP [Mus musculus]
Length = 625
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 343 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 394
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 395 NGKDLEGENIEIVFA-----KPPDQKRKER 419
>gi|384252045|gb|EIE25522.1| hypothetical protein COCSUDRAFT_61728 [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V + +D + ++R FE++G +K + L SG+PRG+ F++F +D A +
Sbjct: 154 TLFVARVSYDATEKKLKREFEEYGPVKRVRLVTQKDSGKPRGYAFVEFEHKNDMKTAYKM 213
Query: 103 MDGQVLLGRELTV 115
DG+ + GR + V
Sbjct: 214 ADGRKIEGRRVVV 226
>gi|75076898|sp|Q4R813.1|HNRGT_MACFA RecName: Full=RNA-binding motif protein, X-linked-like-2; AltName:
Full=Testis-specific heterogeneous nuclear
ribonucleoprotein G-T; Short=hnRNP G-T
gi|67968804|dbj|BAE00759.1| unnamed protein product [Macaca fascicularis]
Length = 394
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D P L + L + + + F ++G I ++ L +D + + RGF F+ F P +A
Sbjct: 5 DRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKA 64
Query: 99 AKRHMDGQVLLGRELTVVFA 118
A R M+G+ L G+ + V A
Sbjct: 65 AARDMNGKSLDGKAIKVAQA 84
>gi|195330384|ref|XP_002031884.1| GM23813 [Drosophila sechellia]
gi|194120827|gb|EDW42870.1| GM23813 [Drosophila sechellia]
Length = 375
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 45 LVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L RN+ D + F FG +K++ P D ++ RG F+++ P+D A +HM
Sbjct: 226 LTRNVTKD----HVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKHM 281
Query: 104 DGQVLLGRELTV 115
DG + G+E+TV
Sbjct: 282 DGGQIDGQEITV 293
>gi|283837905|ref|NP_001082402.1| splicing factor, arginine/serine-rich 10 [Xenopus laevis]
gi|83318282|gb|AAI08874.1| LOC398448 protein [Xenopus laevis]
Length = 298
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 31 RYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQ 89
R+ G R P L V L D+R F ++G + D+ + D S RGF F+
Sbjct: 110 RHIGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLSDVSIVYDQQSRRSRGFSFVY 169
Query: 90 FVEPDDAAEAKRHMDGQVLLGRELTVVFAEENR 122
F DDA EAK +G L GR L V F+ R
Sbjct: 170 FENVDDAKEAKERANGMELDGRRLRVDFSITKR 202
>gi|354466428|ref|XP_003495676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Cricetulus griseus]
Length = 623
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|297828391|ref|XP_002882078.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
gi|297327917|gb|EFH58337.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
Length = 250
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 43 SLLVRNLR-HDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V N R D+ R FE +G + ++ + R+ F F+QF +DA +A
Sbjct: 96 TLFVINFDPIRTRERDMERHFEPYGKVLNVRIRRN--------FAFVQFATQEDATKALD 147
Query: 102 HMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRSPPPRYA--RSP 159
+L R ++V +A D +R G RRRSP P Y R P P Y RSP
Sbjct: 148 CTHNSKILDRVVSVEYALRE-----DGEREDRYAGSPRRRSPSPVYRRRPSPDYGRPRSP 202
Query: 160 SYGRDYSPPPRRRNYSRSVSPHGQNYSRERSYSRSPAYDGPR 201
Y R P P R S +Y R R +RSP YD R
Sbjct: 203 EYDRYKGPAPYERRRSPDYRRRSPDYGRAR--ARSPGYDSSR 242
>gi|298712969|emb|CBJ26871.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 319
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L + + +D + +RR FEQFG I+ I + +D G+PRG+ F+++ DD
Sbjct: 118 DAYKTLFIAKISYDTTEKKLRREFEQFGRIQSIRMVQDE-DGKPRGYAFVEYENEDDMRV 176
Query: 99 AKRHMDGQVLLGRELTV 115
A + DG+ + GR + V
Sbjct: 177 AYKRGDGRKIDGRRVLV 193
>gi|37589144|gb|AAH58807.1| Syncrip protein, partial [Mus musculus]
Length = 635
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 413 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 464
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 465 NGKDLEGENIEIVFA-----KPPDQKRKER 489
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G I D+ L D +G RG+ F+ F + A EA K
Sbjct: 235 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 294
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 295 LYNNHEIRSGKHIGVCISVAN 315
>gi|114145493|ref|NP_062640.2| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Mus musculus]
gi|44888326|sp|Q7TMK9.2|HNRPQ_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein Q;
Short=hnRNP Q; AltName: Full=Glycine- and tyrosine-rich
RNA-binding protein; Short=GRY-RBP; AltName:
Full=NS1-associated protein 1; AltName:
Full=Synaptotagmin-binding, cytoplasmic RNA-interacting
protein; AltName: Full=pp68
gi|148694587|gb|EDL26534.1| mCG16769, isoform CRA_a [Mus musculus]
gi|148694589|gb|EDL26536.1| mCG16769, isoform CRA_a [Mus musculus]
Length = 623
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|343959502|dbj|BAK63608.1| RNA-binding protein with serine-rich domain 1 [Pan troglodytes]
Length = 305
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSP+ PT + + L + + I F +G IK I +P + +
Sbjct: 151 RKRRSPSPK-----------PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHP 199
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
+G+ +++F PD+A +A +HMDG + G+E+T
Sbjct: 200 HLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAV 238
>gi|195117134|ref|XP_002003104.1| GI24161 [Drosophila mojavensis]
gi|193913679|gb|EDW12546.1| GI24161 [Drosophila mojavensis]
Length = 452
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V + +D +RR FE +G IK I L D SG+P+G+ FI++ D A +H
Sbjct: 103 TLFVARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKH 162
Query: 103 MDGQVLLGRELTV 115
DG+ + + + V
Sbjct: 163 ADGKKIDSKRVLV 175
>gi|62087776|dbj|BAD92335.1| synaptotagmin binding, cytoplasmic RNA interacting protein variant
[Homo sapiens]
Length = 534
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 312 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 363
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 364 NGKDLEGENIEIVFA-----KPPDQKRKER 388
>gi|36100|emb|CAA28352.1| unnamed protein product [Homo sapiens]
Length = 614
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V + +D +RR FE +G IK I++ SG+PRG+ FI++ D
Sbjct: 277 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 336
Query: 99 AKRHMDGQVLLGRELTV 115
A +H DG+ + GR + V
Sbjct: 337 AYKHADGKKIDGRRVLV 353
>gi|355785944|gb|EHH66127.1| SR-related protein LDC2 [Macaca fascicularis]
Length = 285
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSP+ PT + + L + + I F +G IK I +P + +
Sbjct: 150 RKRRSPSPK-----------PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHP 198
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFA 118
+G+ +++F PD+A +A +HMDG + G+E+T
Sbjct: 199 HLSKGYAYVEFENPDEADKALKHMDGGQIDGQEITATAV 237
>gi|148694590|gb|EDL26537.1| mCG16769, isoform CRA_c [Mus musculus]
Length = 612
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 391 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 442
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 443 NGKDLEGENIEIVFA-----KPPDQKRKER 467
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G I D+ L D +G RG+ F+ F + A EA K
Sbjct: 213 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 272
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 273 LYNNHEIRSGKHIGVCISVAN 293
>gi|119613102|gb|EAW92696.1| hCG2026745, isoform CRA_a [Homo sapiens]
gi|119613103|gb|EAW92697.1| hCG2026745, isoform CRA_a [Homo sapiens]
gi|119613104|gb|EAW92698.1| hCG2026745, isoform CRA_a [Homo sapiens]
Length = 305
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSP+ PT + + L + + I F +G IK I +P + +
Sbjct: 151 RKRRSPSPK-----------PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHP 199
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGREL--TVVFA 118
+G+ ++F PD+A +A +HMDG + G+E+ TVV A
Sbjct: 200 HLSKGYACVEFENPDEAEKALKHMDGGQIDGQEITATVVLA 240
>gi|343427687|emb|CBQ71214.1| related to Transformer-2 protein homolog [Sporisorium reilianum
SRZ2]
Length = 341
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKR 101
+L V L D+ F ++G I+ + D +S EPRGF F+ F + +DA A
Sbjct: 73 NNLHVSGLSKGTTDRDLEEAFGKYGPIQKAQVMYDPHSREPRGFAFVTFEKAEDAEAAIT 132
Query: 102 HMDGQVLLGRELTVVFAEENRKK 124
M+ LGR++TV A R +
Sbjct: 133 AMNNTEFLGRKITVEKARRGRAR 155
>gi|194373527|dbj|BAG56859.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSP+ PT + + L + + I F +G IK I +P + +
Sbjct: 128 RKRRSPSPK-----------PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHP 176
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ +++F PD+A +A +HMDG + G+E+T
Sbjct: 177 HLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 213
>gi|50417136|gb|AAH77089.1| Snrnp70 protein [Danio rerio]
Length = 306
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V + +D +RR FE +G IK IY+ + +G PRG+ FI++ D
Sbjct: 100 DAFKTLFVARINYDTTESKLRREFEVYGPIKRIYIVYNKKTGRPRGYAFIEYEHERDMHS 159
Query: 99 AKRHMDGQVLLGRELTV 115
A +H DG+ + GR + V
Sbjct: 160 AYKHADGKKIDGRRVLV 176
>gi|322788792|gb|EFZ14360.1| hypothetical protein SINV_07413 [Solenopsis invicta]
Length = 324
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 41 PTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEA 99
PT + + +L + + + F +G IK + D + + RGF +++F D+A A
Sbjct: 165 PTKIHIGHLTRNVTKDHVIEIFSVYGQIKMVDFAVDKLHPNQGRGFAYVEFETADEAENA 224
Query: 100 KRHMDGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRR-----RSPPPRYSRSPP 152
+HMDG + G+E+T + +P MR GR R R+ PPRY R P
Sbjct: 225 MKHMDGGQIDGQEITAAPVLLPKPRPLPMRRMSPGRRVIPRWGGGGRNTPPRYRRRSP 282
>gi|417411732|gb|JAA52293.1| Putative heteroproteinous nuclear ribonucleoprotein r rrm
superfamily, partial [Desmodus rotundus]
Length = 577
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 355 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 406
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 407 NGKDLEGENIEIVFA-----KPPDQKRKER 431
>gi|226088567|dbj|BAH37028.1| RNA binding motif protein [Tokudaia osimensis]
Length = 279
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 45 LVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHMD 104
+ L + + + F ++G I ++ L +D + + RGF F+ F P DA +A R M+
Sbjct: 1 FIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMN 60
Query: 105 GQVLLGRELTVVFAEENRKKPS 126
G+ L G+ + V E KPS
Sbjct: 61 GKSLDGKAIKV----EQATKPS 78
>gi|345326440|ref|XP_001510154.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Ornithorhynchus anatinus]
Length = 527
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 356
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 357 NGKDLEGENIEIVFA-----KPPDQKRKER 381
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G+I D+ L D +G RG+ F+ F + A EA K
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGSIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 222 LYNNHEIRSGKHIGVCISVAN 242
>gi|115621276|ref|XP_800344.2| PREDICTED: uncharacterized protein LOC585553 [Strongylocentrotus
purpuratus]
Length = 328
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEAKRH 102
L V L + E + F +GA+K I +P D + RGF ++ F+ +DA +A +H
Sbjct: 176 LHVGKLTRNVNKEHLMEIFSIYGAVKSIDIPPDRVHPHMSRGFAYVDFMSSNDADKALKH 235
Query: 103 MDGQVLLGRELTVVFA 118
MDG + G+E+T F
Sbjct: 236 MDGGQIDGQEITAAFV 251
>gi|383408701|gb|AFH27564.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 39 DLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAE 98
D +L V + +D +RR FE +G IK I++ SG+PRG+ FI++ D
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 159
Query: 99 AKRHMDGQVLLGRELTV 115
A +H DG+ + GR + V
Sbjct: 160 AYKHADGKKIDGRRVLV 176
>gi|359478878|ref|XP_002280779.2| PREDICTED: uncharacterized protein LOC100246735 [Vitis vinifera]
Length = 330
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L ++ + F G++ D++L D ++ E RGFGF+ ++A ++
Sbjct: 50 NLYVTGLSTRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEANRCIKY 109
Query: 103 MDGQVLLGRELTV 115
+D VL GR +TV
Sbjct: 110 LDRSVLEGRVITV 122
>gi|24645403|ref|NP_649903.1| RNA-binding protein S1 [Drosophila melanogaster]
gi|21430218|gb|AAM50787.1| LD23870p [Drosophila melanogaster]
gi|22859164|emb|CAD30680.1| RNA-binding protein S1 [Drosophila melanogaster]
gi|23170813|gb|AAF54396.2| RNA-binding protein S1 [Drosophila melanogaster]
gi|220943904|gb|ACL84495.1| RnpS1-PA [synthetic construct]
gi|220953778|gb|ACL89432.1| RnpS1-PA [synthetic construct]
Length = 374
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 45 LVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L RN+ D + F FG +K++ P D ++ RG F+++ P+D A +HM
Sbjct: 226 LTRNVTKD----HVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKHM 281
Query: 104 DGQVLLGRELTV 115
DG + G+E+TV
Sbjct: 282 DGGQIDGQEITV 293
>gi|255561192|ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
gi|223539286|gb|EEF40879.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
Length = 506
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 43 SLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRH 102
+L V L ++ I+R FE +G IK + L D + +PRG+ FI+++ D A +
Sbjct: 139 TLFVARLNYETTESRIKREFESYGPIKRVRLITDKAANKPRGYAFIEYMHTRDMKAAYKQ 198
Query: 103 MDGQVLLGRELTV 115
DG+ L GR + V
Sbjct: 199 ADGRKLDGRRVLV 211
>gi|426353903|ref|XP_004044414.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Gorilla
gorilla gorilla]
Length = 527
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 356
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 357 NGKDLEGENIEIVFA-----KPPDQKRKER 381
>gi|426353897|ref|XP_004044411.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Gorilla
gorilla gorilla]
Length = 562
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|410985347|ref|XP_003998984.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 1
[Felis catus]
gi|410985349|ref|XP_003998985.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 2
[Felis catus]
Length = 305
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSP+ PT + + L + + I F +G IK I +P + +
Sbjct: 151 RKRRSPSPK-----------PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHP 199
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ +++F PD+A +A +HMDG + G+E+T
Sbjct: 200 HLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
>gi|350581893|ref|XP_003481146.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
isoform 1 [Sus scrofa]
gi|350581895|ref|XP_003481147.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
isoform 2 [Sus scrofa]
Length = 305
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 21 RRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD-YYS 79
R+ RSPSP+ PT + + L + + I F +G IK I +P + +
Sbjct: 151 RKRRSPSPK-----------PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHP 199
Query: 80 GEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVV 116
+G+ +++F PD+A +A +HMDG + G+E+T
Sbjct: 200 HLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
>gi|410959606|ref|XP_004001668.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein Q [Felis catus]
Length = 562
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|228008293|ref|NP_001153148.1| heterogeneous nuclear ribonucleoprotein Q isoform 5 [Homo sapiens]
gi|390461868|ref|XP_003732753.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Callithrix
jacchus]
gi|119569009|gb|EAW48624.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_c [Homo sapiens]
Length = 561
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
>gi|90078208|dbj|BAE88784.1| unnamed protein product [Macaca fascicularis]
Length = 288
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 25 SPSP---RGRYGGGRGRDLPTSLL-VRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSG 80
S SP R R+ G R P L V L D+R F ++G I D+ + D S
Sbjct: 97 SHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSR 156
Query: 81 EPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELTVVFAEENR 122
RGF F+ F DDA EAK +G L GR + V F+ R
Sbjct: 157 RSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 198
>gi|345326436|ref|XP_003431043.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q
[Ornithorhynchus anatinus]
Length = 562
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 391
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 392 NGKDLEGENIEIVFA-----KPPDQKRKER 416
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 42 TSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEA-K 100
T + V + D +++ FE+ G+I D+ L D +G RG+ F+ F + A EA K
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGSIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 101 RHMDGQVLLGRELTVVFAEEN 121
+ + ++ G+ + V + N
Sbjct: 222 LYNNHEIRSGKHIGVCISVAN 242
>gi|357620857|gb|EHJ72894.1| ribonucleic acid binding protein S1 [Danaus plexippus]
Length = 316
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 18 GYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRD- 76
G +R RSP PR PT + + L + + I F +G +K + P D
Sbjct: 159 GRKKRERSPPPR-----------PTRIHIGRLTLNVSRDHIHEIFSTYGTVKAVEFPMDR 207
Query: 77 YYSGEPRGFGFIQFVEPDDAAEAKRHMDGQVLLGRELT 114
+ RG+ +++F PD+A A +HMDG + G+E+T
Sbjct: 208 LHPHNGRGYAYVEFSNPDEAENAMKHMDGGQIDGQEIT 245
>gi|357134837|ref|XP_003569022.1| PREDICTED: uncharacterized protein LOC100826232 [Brachypodium
distachyon]
Length = 335
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 22/160 (13%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L V L R D+ F ++G I+++ L RDY FI++ +P DA +A+ ++
Sbjct: 13 LYVGRLSSRTRTRDLEYLFSRYGRIREVELKRDY--------AFIEYSDPRDADDAQYNL 64
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARERGRGRFRRRSPPPRYSRS----PPPRYARSP 159
DG+ + G + V FA+ + P R RE + R PPP R +AR
Sbjct: 65 DGRDVDGSRIIVEFAKGIPRGPGGSRERE-----YMGRGPPPGTGRCFNCGIDGHWARDC 119
Query: 160 SYGRDYSPPPRRRNYSRSVSPHGQN----YSRERSYSRSP 195
G D+ R + + QN RERSYSRSP
Sbjct: 120 KAG-DWKNKCYRCGERGHIERNCQNSPRSLRRERSYSRSP 158
>gi|228008398|ref|NP_001153146.1| heterogeneous nuclear ribonucleoprotein Q isoform 3 [Homo sapiens]
gi|291396566|ref|XP_002714607.1| PREDICTED: synaptotagmin binding, cytoplasmic RNA interacting
protein isoform 3 [Oryctolagus cuniculus]
gi|296198706|ref|XP_002746829.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 3
[Callithrix jacchus]
gi|301775583|ref|XP_002923212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 2
[Ailuropoda melanoleuca]
gi|332218417|ref|XP_003258352.1| PREDICTED: uncharacterized protein LOC100579672 [Nomascus
leucogenys]
gi|348578334|ref|XP_003474938.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 5
[Cavia porcellus]
gi|397504634|ref|XP_003822889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2 [Pan
paniscus]
gi|402867570|ref|XP_003897916.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Papio anubis]
gi|426234736|ref|XP_004011348.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 5
[Ovis aries]
gi|21619168|gb|AAH32643.1| SYNCRIP protein [Homo sapiens]
gi|119569013|gb|EAW48628.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_f [Homo sapiens]
gi|296484070|tpg|DAA26185.1| TPA: synaptotagmin binding, cytoplasmic RNA interacting protein
isoform 2 [Bos taurus]
gi|325464513|gb|ADZ16027.1| synaptotagmin binding, cytoplasmic RNA interacting protein
[synthetic construct]
Length = 527
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 44 LLVRNLRHDCRPEDIRRPFEQFGAIKDIYLPRDYYSGEPRGFGFIQFVEPDDAAEAKRHM 103
L VRNL + E + + F QFG ++ + +DY FI F E D A +A M
Sbjct: 305 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKAMEEM 356
Query: 104 DGQVLLGRELTVVFAEENRKKPSDMRARER 133
+G+ L G + +VFA KP D + +ER
Sbjct: 357 NGKDLEGENIEIVFA-----KPPDQKRKER 381
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,926,322,649
Number of Sequences: 23463169
Number of extensions: 246568160
Number of successful extensions: 1489676
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14447
Number of HSP's successfully gapped in prelim test: 18519
Number of HSP's that attempted gapping in prelim test: 1180996
Number of HSP's gapped (non-prelim): 172264
length of query: 253
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 114
effective length of database: 9,097,814,876
effective search space: 1037150895864
effective search space used: 1037150895864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)