Query 025403
Match_columns 253
No_of_seqs 144 out of 690
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 09:34:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025403.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025403hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ahn_A Thaumatin-like protein; 100.0 2.6E-90 8.8E-95 608.7 17.5 221 26-248 1-222 (222)
2 1du5_A Zeamatin; beta sandwich 100.0 8.7E-84 3E-88 561.0 12.5 203 26-248 1-206 (206)
3 2vhk_A Thaumatin-I; kinetics o 100.0 5.2E-83 1.8E-87 555.8 14.9 204 26-249 1-206 (206)
4 1aun_A PR-5D; antifungal prote 100.0 7.3E-83 2.5E-87 555.9 15.1 205 25-250 1-208 (208)
5 1z3q_A Thaumatin-like protein; 100.0 3E-82 1E-86 548.8 14.6 198 26-248 1-200 (200)
6 3g7m_A Xylanase inhibitor TL-X 100.0 1E-53 3.6E-58 355.4 12.6 117 26-148 1-118 (151)
7 3gd0_A Laminaripentaose-produc 95.5 0.062 2.1E-06 50.1 9.8 115 22-147 3-148 (367)
8 4aor_D Trypsin inhibitor 3; hy 77.4 0.69 2.3E-05 28.6 0.7 14 187-200 11-24 (37)
9 3gd0_A Laminaripentaose-produc 56.7 7.1 0.00024 36.2 3.3 39 210-248 321-365 (367)
10 4ajy_V VON hippel-lindau disea 56.5 8.7 0.0003 31.7 3.5 51 22-78 18-68 (163)
11 1lm8_V VHL, VON hippel-lindau 46.2 17 0.00058 29.9 3.6 52 22-79 15-66 (160)
12 2hrv_A 2A cysteine proteinase; 27.1 17 0.00059 29.3 0.7 18 88-106 97-114 (142)
13 3q48_A Chaperone CUPB2; IG fol 25.7 68 0.0023 27.8 4.3 45 24-68 44-99 (257)
14 1z8r_A Coxsackievirus B4 polyp 25.5 20 0.00069 29.6 0.8 18 88-106 117-134 (166)
15 4dz1_A DALS D-alanine transpor 23.7 25 0.00087 28.7 1.1 9 1-9 1-9 (259)
16 3qax_A Probable ABC transporte 23.5 24 0.00083 28.4 1.0 7 1-7 1-7 (268)
17 2qn4_A RASI, alpha-amylase/sub 23.1 35 0.0012 28.7 1.9 23 49-72 26-48 (200)
18 1ok0_A Tendamistat, alpha-amyl 22.9 1.3E+02 0.0046 21.3 4.6 38 27-67 20-57 (74)
19 2xx6_A SPBC2 prophage-derived 22.5 68 0.0023 25.3 3.4 28 55-82 31-64 (142)
No 1
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium}
Probab=100.00 E-value=2.6e-90 Score=608.69 Aligned_cols=221 Identities=51% Similarity=1.051 Sum_probs=211.7
Q ss_pred eEEEEEeCCCCcccceeecCCCCCCCCCCCeeecCCCEEEEecCCCCceeeeeecccccCCCCcccccCCCCCCCccccC
Q 025403 26 ASFKMVNKCRRTVWPGLLSGANSPPLPTTGFELKSGKSRTITIPKSWSGRIWARTLCTHHQNQTFSCVTGDCGSQKLECA 105 (253)
Q Consensus 26 ~t~tv~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriWaRtgCs~~~~g~~~C~TGdC~~g~~~C~ 105 (253)
++|||+|+|+|||||++++++|++++..+||+|++|++++|.+|++|+|||||||+|++|+.|+++|+||||++|+|+|+
T Consensus 1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~ 80 (222)
T 2ahn_A 1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCN 80 (222)
T ss_dssp CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCT
T ss_pred CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcceEEEEecCCCCcccccccccCcccCcceeeecCCCCCCCCCccccccccccCCccccccccCCCcccccCc
Q 025403 106 GGGAAPPATLAEFTLNGAGGLDFYDVSLVDGYNLPMLVVPKGGRGGGCGATGCLVDLNGACPAELKVAREGRGGSVACKS 185 (253)
Q Consensus 106 ~~g~~~paTlaEftl~~~~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~d~~~~CP~~l~~~~~~~~~~v~C~S 185 (253)
+.++.||+|||||+|++.+++|||||||||||||||+|+|+++. +.|+.++|.+|||..||.|||+++.+ |++|||||
T Consensus 81 g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~-~~C~~~~C~~dln~~CP~eL~v~~~~-G~~v~C~s 158 (222)
T 2ahn_A 81 GNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGT-GDCKTASCPANVNAVCPSELQKKGSD-GSVVACLS 158 (222)
T ss_dssp TCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCB-SCCCCEEECSCGGGGCCGGGEEECTT-SCEEEECC
T ss_pred CCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCC-CCcccCcccCchhhhCCHHHeeecCC-CcEecccc
Confidence 98889999999999998778999999999999999999998754 48999999999999999999997654 46999999
Q ss_pred hhhhcCCCcccccCCCCCCCCCCCccchhHhhccCCCcccccCCCCCCceeecC-CCeEEEecC
Q 025403 186 ACEAFGDPRYCCSEAYATPDTCFPSVYSLFFKHVCPRAYSYAYDDKTSTYTCGS-ADYVIIFCP 248 (253)
Q Consensus 186 aC~~~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~DD~ts~ftC~~-~~y~VtFCP 248 (253)
||++|++|||||+|+|++|++|+||+||++||++||+||||||||++|+|||++ ++|+|||||
T Consensus 159 aC~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP 222 (222)
T 2ahn_A 159 ACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222 (222)
T ss_dssp HHHHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred cccccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 999999999999999999999999999999999999999999999999999987 699999998
No 2
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1
Probab=100.00 E-value=8.7e-84 Score=561.02 Aligned_cols=203 Identities=46% Similarity=0.935 Sum_probs=192.0
Q ss_pred eEEEEEeCCCCcccceeecCCCCCCCCCCCeeecCCCEEEEecCCC-CceeeeeecccccCCCCcccccCCCCCCCcccc
Q 025403 26 ASFKMVNKCRRTVWPGLLSGANSPPLPTTGFELKSGKSRTITIPKS-WSGRIWARTLCTHHQNQTFSCVTGDCGSQKLEC 104 (253)
Q Consensus 26 ~t~tv~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~-WsGriWaRtgCs~~~~g~~~C~TGdC~~g~~~C 104 (253)
++|||+|||+|||||++++. ++||+|++|+++++++|++ |+|||||||+|++|+.|+++|+||||+ |+|+|
T Consensus 1 ~tfti~N~C~~tVWp~~~p~-------~gG~~L~~G~s~s~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCg-g~l~C 72 (206)
T 1du5_A 1 AVFTVVNQCPFTVWAASVPV-------GGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCG-GVLQC 72 (206)
T ss_dssp CEEEEEECSSSCEEEEEETT-------TEEEEECTTCEEEEECCTTCCSEEEEEECSEEECTTSBEEESSSCCT-TBSSC
T ss_pred CEEEEEeCCCCCcCCeEecC-------CCCEecCCCCeEEEECCCCCcccceecccccCCCCCCCccccccCCC-Ceeec
Confidence 58999999999999999862 3689999999999999999 999999999999999999999999999 99999
Q ss_pred CCCCCCCCcceEEEEecCCCCcccccccccCcccCcceeeecCCCCCCC-CCccccccccccCCccccccccCCCccccc
Q 025403 105 AGGGAAPPATLAEFTLNGAGGLDFYDVSLVDGYNLPMLVVPKGGRGGGC-GATGCLVDLNGACPAELKVAREGRGGSVAC 183 (253)
Q Consensus 105 ~~~g~~~paTlaEftl~~~~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C-~~~~C~~d~~~~CP~~l~~~~~~~~~~v~C 183 (253)
++ ++.||+|||||+|++.+++|||||||||||||||+|+|+++. .| +.++|.+|||..||.|||++ +||
T Consensus 73 ~g-~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~--~C~~~~~C~~dln~~CP~~L~v~-------~gC 142 (206)
T 1du5_A 73 TG-YGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGS--GCSRGPRCAVDVNARCPAELRQD-------GVC 142 (206)
T ss_dssp CS-CCCSSCCEEEEEEEEGGGEEEEEEECTTCBCSCEEEEECSSS--SCCCCCEECSCTTTTCCGGGEET-------TEE
T ss_pred CC-CCCCcceeeEEEeccCCCCceeeeeeecccccCEEEecCCCC--CCcCCCcccccchhhCCHHHhhc-------ccc
Confidence 98 678999999999997668999999999999999999998642 69 99999999999999999994 489
Q ss_pred CchhhhcCCCcccccCCCCCCCCCCCccchhHhhccCCCcccccCCCCCCceeecC-CCeEEEecC
Q 025403 184 KSACEAFGDPRYCCSEAYATPDTCFPSVYSLFFKHVCPRAYSYAYDDKTSTYTCGS-ADYVIIFCP 248 (253)
Q Consensus 184 ~SaC~~~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~DD~ts~ftC~~-~~y~VtFCP 248 (253)
||||++|++|||||+|+|++ +|+|++||++||++||+||||||||.+|+|+|++ ++|+|||||
T Consensus 143 ~saC~~f~~~~yCC~g~~~~--~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~vtFCP 206 (206)
T 1du5_A 143 NNACPVFKKDEYCCVGSAAN--DCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206 (206)
T ss_dssp CCHHHHHCCHHHHCCGGGGG--GCCCCHHHHHHHHHCTTSBSSTTCHHHHCEEEETTCCEEEEECC
T ss_pred CChhhccCCCcccccCCCCC--cCCcchHHHHHHhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 99999999999999999987 9999999999999999999999999999999987 799999998
No 3
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ...
Probab=100.00 E-value=5.2e-83 Score=555.83 Aligned_cols=204 Identities=43% Similarity=0.881 Sum_probs=191.3
Q ss_pred eEEEEEeCCCCcccceeecCCCCCCCCCCCeeecCCCEEEEecCCC-CceeeeeecccccCCCCcccccCCCCCCCcccc
Q 025403 26 ASFKMVNKCRRTVWPGLLSGANSPPLPTTGFELKSGKSRTITIPKS-WSGRIWARTLCTHHQNQTFSCVTGDCGSQKLEC 104 (253)
Q Consensus 26 ~t~tv~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~-WsGriWaRtgCs~~~~g~~~C~TGdC~~g~~~C 104 (253)
++|||+|||+||||||++++ +++++++||+|++|++++|++|++ |+|||||||+|+||+.|+++|+||||+ |+|+|
T Consensus 1 ~tfti~N~C~~tVWp~~~~g--~~~l~~gG~~L~~G~s~~~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCg-g~l~C 77 (206)
T 2vhk_A 1 ATFEIVNRCSYTVWAAASKG--DAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCG-GLLRC 77 (206)
T ss_dssp CEEEEEECSSSCEEEEEECS--SSEEEEEEEEECTTCEEEEECCTTCCSEEEEEEBSCEECTTSBEECSBSCCT-TBSSC
T ss_pred CEEEEEeCCCCCcCCEEcCC--CCcCCCCCeecCCCCEEEEECCCCCcccceeccccCCCCCCCCcccccCCCC-ceeec
Confidence 58999999999999999874 455667899999999999999998 999999999999999999999999999 99999
Q ss_pred CCCCCCCCcceEEEEecCCCCcccccccccCcccCcceeeecCCCCCCCCCccccccccccCCccccccccCCCcccccC
Q 025403 105 AGGGAAPPATLAEFTLNGAGGLDFYDVSLVDGYNLPMLVVPKGGRGGGCGATGCLVDLNGACPAELKVAREGRGGSVACK 184 (253)
Q Consensus 105 ~~~g~~~paTlaEftl~~~~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~d~~~~CP~~l~~~~~~~~~~v~C~ 184 (253)
++ +++||+|||||+|++.++ |||||||||||||||+|+|+++ .|+.++|.+|||..||.|||++. +|||
T Consensus 78 ~g-~g~pPaTLaEftl~~~~~-dfYDVSlVDGfNlP~~i~p~~g---~C~~~~C~~dln~~CP~eL~v~~------~~C~ 146 (206)
T 2vhk_A 78 KR-FGRPPTTLAEFSLNQYGK-DYIDISNIKGFNVPMNFSPTTR---GCRGVRCAADIVGQCPAKLKAPG------GGCN 146 (206)
T ss_dssp SS-CCCSSCCEEEEEEEETTE-EEEEEECTTCBSSCEEEEESSS---SCCCEEECSCHHHHCCGGGBCTT------SSBC
T ss_pred CC-CCCCCcceEEEEeccCCC-ceeeeeccCCccCCEEeeeCCC---CCCccccccchhhhCCHHHeecc------cccc
Confidence 98 668999999999997655 9999999999999999999853 79999999999999999999962 4999
Q ss_pred chhhhcCCCcccccCCCCCCCCCCCccchhHhhccCCCcccccCCCCCCceeecC-CCeEEEecCC
Q 025403 185 SACEAFGDPRYCCSEAYATPDTCFPSVYSLFFKHVCPRAYSYAYDDKTSTYTCGS-ADYVIIFCPA 249 (253)
Q Consensus 185 SaC~~~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~DD~ts~ftC~~-~~y~VtFCP~ 249 (253)
|||++|++|||||+| ++|+|++||++||++||+||||||||++| |+|++ ++|+|||||.
T Consensus 147 saC~af~~~~yCC~g-----~~C~pt~ys~~FK~~CP~AYsya~Dd~ts-ftC~~~~~Y~VtFCP~ 206 (206)
T 2vhk_A 147 DACTVFQTSEYCCTT-----GKCGPTEYSRFFKRLCPDAFSYVLDKPTT-VTCPGSSNYRVTFCPT 206 (206)
T ss_dssp CHHHHHCCHHHHTTT-----SCCCCCHHHHHHHHHCTTSBCSTTSCCCC-EEEETTCCEEEEESCC
T ss_pred ChhhccCCCcccccC-----CCCCcchhHHHHHhhCcccccCCCCCCCc-eecCCCCCEEEEeCCC
Confidence 999999999999999 69999999999999999999999999999 99987 7999999994
No 4
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A
Probab=100.00 E-value=7.3e-83 Score=555.92 Aligned_cols=205 Identities=42% Similarity=0.857 Sum_probs=191.0
Q ss_pred ceEEEEEeCCCCcccceeecCCCCCCCCCCCeeecCCCEEEEecCCCCc-eeeeeecccccCCCCcccccCCCCCCCccc
Q 025403 25 PASFKMVNKCRRTVWPGLLSGANSPPLPTTGFELKSGKSRTITIPKSWS-GRIWARTLCTHHQNQTFSCVTGDCGSQKLE 103 (253)
Q Consensus 25 a~t~tv~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~Ws-GriWaRtgCs~~~~g~~~C~TGdC~~g~~~ 103 (253)
+++|||+|+|+|||||++++ ..+||+|++|+++++++|++|+ |||||||+|+||+.|+++|+||||+ |+|+
T Consensus 1 ~~t~ti~N~C~~tVWp~~~p-------~~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCg-g~l~ 72 (208)
T 1aun_A 1 SGVFEVHNNCPYTVWAAATP-------VGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCG-GVLE 72 (208)
T ss_dssp CCEEEEEECSSSCEEEEEET-------TTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCT-TBSS
T ss_pred CcEEEEEeCCCCCcCCeEec-------CCCCeeCCCCCeEEEECCCCCcccceecccccCCCCCCCcccccCCcC-ceee
Confidence 46999999999999999976 2368999999999999999995 9999999999999999999999999 9999
Q ss_pred cCCCCCCCCcceEEEEecCCCCcccccccccCcccCcceeeecCCCCCCCCCccccccccccCCccccccccCCCccccc
Q 025403 104 CAGGGAAPPATLAEFTLNGAGGLDFYDVSLVDGYNLPMLVVPKGGRGGGCGATGCLVDLNGACPAELKVAREGRGGSVAC 183 (253)
Q Consensus 104 C~~~g~~~paTlaEftl~~~~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~d~~~~CP~~l~~~~~~~~~~v~C 183 (253)
|++ +++||+|||||+|++.+++|||||||||||||||+|+|+++..+.|+.++|.+|||..||.|||++ .||
T Consensus 73 C~g-~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlP~~i~P~~~g~g~C~~~~C~~dln~~CP~~L~v~-------~~C 144 (208)
T 1aun_A 73 CKG-WGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVP-------GGC 144 (208)
T ss_dssp CSS-CCCSSCCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEET-------TEE
T ss_pred cCC-CCCCCcceEEEEecCCCCCceeeeecccCcccCeeeeeCCCCCCCCCcccccCcchhhCCHHHccc-------ccc
Confidence 998 668999999999997778999999999999999999998632247999999999999999999995 289
Q ss_pred CchhhhcCCCcccccCCCCCCCCCCCccchhHhhccCCCcccccCCCCCCceeecC--CCeEEEecCCC
Q 025403 184 KSACEAFGDPRYCCSEAYATPDTCFPSVYSLFFKHVCPRAYSYAYDDKTSTYTCGS--ADYVIIFCPAP 250 (253)
Q Consensus 184 ~SaC~~~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~DD~ts~ftC~~--~~y~VtFCP~~ 250 (253)
||||++|++|||||+| ++|+|++||++||++||+||||||||++|+|+|++ ++|+|||||.+
T Consensus 145 ~saC~af~~~~yCC~g-----~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~~y~vtFCP~g 208 (208)
T 1aun_A 145 NNPCTTFGGQQYCCTQ-----GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPYG 208 (208)
T ss_dssp CCHHHHTCSHHHHCTT-----SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTTC
T ss_pred cCHhhhcCCCcccccC-----CCCCcchHHHHHHhcCcccccCCCCCCCcCeECCCCCCCEEEEeCCCC
Confidence 9999999999999999 69999999999999999999999999999999985 79999999974
No 5
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata}
Probab=100.00 E-value=3e-82 Score=548.84 Aligned_cols=198 Identities=46% Similarity=0.977 Sum_probs=187.3
Q ss_pred eEEEEEeCCCCcccceeecCCCCCCCCCCCeeecCCCEEEEecCCCCc-eeeeeecccccCCCCcccccCCCCCCCcccc
Q 025403 26 ASFKMVNKCRRTVWPGLLSGANSPPLPTTGFELKSGKSRTITIPKSWS-GRIWARTLCTHHQNQTFSCVTGDCGSQKLEC 104 (253)
Q Consensus 26 ~t~tv~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~Ws-GriWaRtgCs~~~~g~~~C~TGdC~~g~~~C 104 (253)
++|||+|||+|||||++++ ++||+|++|+++++++|++|+ |||||||+|++|+.|+++|+||||+ |+|+|
T Consensus 1 ~t~ti~N~C~~tVWp~~~p--------~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCg-g~l~C 71 (200)
T 1z3q_A 1 ATFEIVNRCSYTVWAAAVP--------GGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCG-GVLSC 71 (200)
T ss_dssp CEEEEEECSSSCEEEEEET--------TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCT-TBSSC
T ss_pred CEEEEEeCCCCCeeceEeC--------CCCcccCCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcC-Ceeec
Confidence 5899999999999999963 469999999999999999995 9999999999999999999999999 99999
Q ss_pred CCCCCCCCcceEEEEecCCCCcccccccccCcccCcceeeecCCCCCCCCCccccccccccCCccccccccCCCcccccC
Q 025403 105 AGGGAAPPATLAEFTLNGAGGLDFYDVSLVDGYNLPMLVVPKGGRGGGCGATGCLVDLNGACPAELKVAREGRGGSVACK 184 (253)
Q Consensus 105 ~~~g~~~paTlaEftl~~~~~~d~YdVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~d~~~~CP~~l~~~~~~~~~~v~C~ 184 (253)
++ ++.||+|||||+|++.+++|||||||||||||||+|+|+++ .|+.++|.+|||..||.|||+.+ |||
T Consensus 72 ~g-~g~pPaTLaEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~g---~C~~~~C~~dln~~CP~~L~v~~-------gC~ 140 (200)
T 1z3q_A 72 TA-YGNPPNTLAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSG---GCRGIRCAADINGQCPGALKAPG-------GCN 140 (200)
T ss_dssp SS-CCCSSCCEEEEEEEETTTEEEEEEECTTCBSSCEEEEESSS---SSCCEEECSCHHHHCCTTTEETT-------EEC
T ss_pred CC-CCCCCcceEEEEecCCCCCceeeeeeeccccCCeeeeeCCC---CCCccccccchhhhCCHHHcccC-------ccc
Confidence 98 55799999999999877899999999999999999999853 79999999999999999999952 899
Q ss_pred chhhhcCCCcccccCCCCCCCCCCCccchhHhhccCCCcccccCCCCCCceeecC-CCeEEEecC
Q 025403 185 SACEAFGDPRYCCSEAYATPDTCFPSVYSLFFKHVCPRAYSYAYDDKTSTYTCGS-ADYVIIFCP 248 (253)
Q Consensus 185 SaC~~~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~DD~ts~ftC~~-~~y~VtFCP 248 (253)
|||++|++|||||+| ++|+|++||++||++||+||||||||++|+|+|++ ++|+|||||
T Consensus 141 saC~af~~~~yCC~g-----~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP 200 (200)
T 1z3q_A 141 NPCTVFKTDQYCCNS-----GACSPTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP 200 (200)
T ss_dssp CHHHHHCCHHHHCTT-----SCCCCCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred CcccccCCCcccCCC-----CCCCchhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence 999999999999999 79999999999999999999999999999999986 899999998
No 6
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum}
Probab=100.00 E-value=1e-53 Score=355.40 Aligned_cols=117 Identities=35% Similarity=0.622 Sum_probs=106.5
Q ss_pred eEEEEEeCCCCcccceeecCCCCCCCCCCCeeecCCCEEEEecCCCCceeeeeecccccCCCCcccccCCCCCCCccccC
Q 025403 26 ASFKMVNKCRRTVWPGLLSGANSPPLPTTGFELKSGKSRTITIPKSWSGRIWARTLCTHHQNQTFSCVTGDCGSQKLECA 105 (253)
Q Consensus 26 ~t~tv~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriWaRtgCs~~~~g~~~C~TGdC~~g~~~C~ 105 (253)
++|||+|||+|||||++++.. . ...+||+|++|++++|.+|++|+|||||||+|+||+.|+++|+||||++|+|+|+
T Consensus 1 ~tfti~N~C~~tVWp~~~~~~--~-p~~gG~~L~~g~s~~~~~p~~wsGRiWgRTgC~fd~~g~~~C~TGdCg~g~l~C~ 77 (151)
T 3g7m_A 1 APLTITNRCHFTVWPAVALVL--A-QGGGGTELHPGASWSLDTPVIGSQYIWGRTGCSFDRAGKGRCQTGDCGGSSLTCG 77 (151)
T ss_dssp CCEEEEECSSSCEEEEEEETT--S-SCCEECCBCTTCEEEECCCSSEEEEEEEEESCEECSSCCEECSBSCSSTTSCCSC
T ss_pred CEEEEEeCCCCCccCeeccCC--C-CCCCCeEcCCCCeEEEECCCCCcceeecccCCCCCCCCCcccccCCccCCccccc
Confidence 479999999999999998642 1 2468999999999999999999999999999999999999999999955999999
Q ss_pred CCCCCCCcceEEEEecCCCCccccccccc-CcccCcceeeecCC
Q 025403 106 GGGAAPPATLAEFTLNGAGGLDFYDVSLV-DGYNLPMLVVPKGG 148 (253)
Q Consensus 106 ~~g~~~paTlaEftl~~~~~~d~YdVSlV-dG~NlP~~i~p~~g 148 (253)
+. ++||+|||||+|++ ++|||||||| |||||||+|+|+++
T Consensus 78 ~~-g~pPaTlaEftl~~--~~d~YDVSlV~dG~NlP~~i~P~~g 118 (151)
T 3g7m_A 78 GN-PAVPTTMAEVSVLQ--GNYTYGVTSTLKGFNVPMNLKCSSG 118 (151)
T ss_dssp SC-CCSSCCEEEEEECS--SEEEEEEESSSSCCSSCEEEEESSS
T ss_pred CC-CCCCceeEEEEccC--CCceEEEEeccCCCCCCeEEEeCCC
Confidence 74 58999999999984 7899999999 99999999999865
No 7
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=95.54 E-value=0.062 Score=50.10 Aligned_cols=115 Identities=25% Similarity=0.322 Sum_probs=68.9
Q ss_pred cccceEEEEEeCCCC--cccceeecCC---CCC------------C--------CCCCCeee-cCCCEEEEecCCCCcee
Q 025403 22 ETEPASFKMVNKCRR--TVWPGLLSGA---NSP------------P--------LPTTGFEL-KSGKSRTITIPKSWSGR 75 (253)
Q Consensus 22 ~a~a~t~tv~N~C~~--tVw~~~~~~~---g~~------------~--------~~~~g~~L-~~G~s~s~~vp~~WsGr 75 (253)
....-.|+|+||=.. .||..|++.. |.. + ...-.+.| .+|++++++||. .+||
T Consensus 3 ~~~tlpl~l~Nns~~~~~Vy~yi~G~d~~~g~~~~v~~dG~~~p~~~~~~~~~~~~d~aI~l~~~G~s~ti~iP~-~sGR 81 (367)
T 3gd0_A 3 VPATIPLTITNNSGRAEQIHIYNLGTELSSGRQGWADASGAFHPWPAGGNPPTPAPDASIPGPAPGRSTTIQIPK-FSGR 81 (367)
T ss_dssp CCSEEEEEEEECSCCCSCEEEEEEEEETTTCCEEEECTTCCEEECCCCCSSCEECCCCCEECCCTTCEEEEEEES-EEEE
T ss_pred CCCceeEEEEeCCCCCCcEEEEEEeEeCCCCcEEEEeCCCcEecCCcccCCCCCCcceeEECCCCCCceEEEccC-cCce
Confidence 345678999999974 6998876542 210 0 01113455 367899999998 7999
Q ss_pred eeeecccccCCCCcccccCCCCCCCccccCCCCC-CCC----cceEEEEecCCCCcccccccccCcccCcceeeecC
Q 025403 76 IWARTLCTHHQNQTFSCVTGDCGSQKLECAGGGA-APP----ATLAEFTLNGAGGLDFYDVSLVDGYNLPMLVVPKG 147 (253)
Q Consensus 76 iWaRtgCs~~~~g~~~C~TGdC~~g~~~C~~~g~-~~p----aTlaEftl~~~~~~d~YdVSlVdG~NlP~~i~p~~ 147 (253)
||=-.|= .=.|.=..+ |..+-.-..+ -|- -.-+|||++. ..-|=++|.||-|.+||.|+-.+
T Consensus 82 IyfS~g~----~L~f~~~~~----glv~Ps~~NpsDPN~~~~~~f~EfT~n~--~gl~~N~S~VD~~~~Pl~l~l~~ 148 (367)
T 3gd0_A 82 IYFSYGR----KMEFRLTTG----GLVQPAVQNPTDPNRDILFNWSEYTLND--SGLWINSTQVDMFSAPYTVGVRR 148 (367)
T ss_dssp EEEEESS----CCCCEEETT----EECCCCTTSTTCTTTTSCEEEEEEEEET--TEEEEECCCSSEECSCEEEEEEC
T ss_pred EEEEcCC----ccEEEecCC----CccCCCCCCCCCCCCCceeeEEEEEecC--cceecccceeccccCceEEEEEc
Confidence 9953321 011221111 1111111110 111 1358999996 45789999999999999997554
No 8
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=77.44 E-value=0.69 Score=28.55 Aligned_cols=14 Identities=57% Similarity=1.383 Sum_probs=11.9
Q ss_pred hhhcCCCcccccCC
Q 025403 187 CEAFGDPRYCCSEA 200 (253)
Q Consensus 187 C~~~~~~~~CC~g~ 200 (253)
|..|+.|+|||+|.
T Consensus 11 c~~f~~p~~ccsg~ 24 (37)
T 4aor_D 11 CSGFGPPEQCCSGA 24 (37)
T ss_dssp ECTTSCGGGBTTSC
T ss_pred cCCCCCcccccccc
Confidence 56699999999994
No 9
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=56.72 E-value=7.1 Score=36.23 Aligned_cols=39 Identities=23% Similarity=0.399 Sum_probs=29.3
Q ss_pred ccchhHhhccCC--CcccccCCCC---CCceeecC-CCeEEEecC
Q 025403 210 SVYSLFFKHVCP--RAYSYAYDDK---TSTYTCGS-ADYVIIFCP 248 (253)
Q Consensus 210 t~ys~~fK~~CP--~AYsya~DD~---ts~ftC~~-~~y~VtFCP 248 (253)
+.|++++++.=. .+|.|||||- +++..-.+ ...+||.-|
T Consensus 321 NhYar~vH~~~~dg~~YaF~YDDV~~qs~~v~~~~P~~ltitl~~ 365 (367)
T 3gd0_A 321 NHYARIIHAHMADGKAYGFAFDDVGHHESLVHDGDPRGASLTLDP 365 (367)
T ss_dssp CHHHHHHHHHBTTSCCCCSTTTTTTTCSCEEEESSCSEEEEEECC
T ss_pred cHHHHHHHHhccCCCeeeCCccCCCCccccccCCCCCEEEEEEcC
Confidence 569999999855 7899999975 34555555 678888755
No 10
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=56.50 E-value=8.7 Score=31.73 Aligned_cols=51 Identities=27% Similarity=0.466 Sum_probs=38.3
Q ss_pred cccceEEEEEeCCCCcccceeecCCCCCCCCCCCeeecCCCEEEEecCCCCceeeee
Q 025403 22 ETEPASFKMVNKCRRTVWPGLLSGANSPPLPTTGFELKSGKSRTITIPKSWSGRIWA 78 (253)
Q Consensus 22 ~a~a~t~tv~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriWa 78 (253)
+.....++|+|+++.+|-+-|..-.|.+... ..|+||+.+.++. +.+..|=
T Consensus 18 S~~~~~V~FvN~s~~~V~v~WIDy~G~~~~Y---~tL~PG~~~~~~T---Y~tHpWv 68 (163)
T 4ajy_V 18 SREPSQVIFCNRSPRVVLPVWLNFDGEPQPY---PTLPPGTGRRIHS---YRGHLWL 68 (163)
T ss_dssp CCCEEEEEEEECSSSCEEEEEECTTSCEEEC---CCBCTTEEEEEEE---ETTCEEE
T ss_pred CCceEEEEEEeCCCCeEEEEEECCCCCEEEe---eeeCCCCeEEecC---CCCCcEE
Confidence 3456889999999999999998877765433 2799999988753 4455553
No 11
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=46.24 E-value=17 Score=29.88 Aligned_cols=52 Identities=27% Similarity=0.436 Sum_probs=38.2
Q ss_pred cccceEEEEEeCCCCcccceeecCCCCCCCCCCCeeecCCCEEEEecCCCCceeeeee
Q 025403 22 ETEPASFKMVNKCRRTVWPGLLSGANSPPLPTTGFELKSGKSRTITIPKSWSGRIWAR 79 (253)
Q Consensus 22 ~a~a~t~tv~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriWaR 79 (253)
+.....|+|+|+.+.+|-+-+..-.|.+... ..|+||+.+.++. +.+..|--
T Consensus 15 s~~~~~V~FvN~s~~~V~v~WIDy~G~~v~Y---~~L~PG~~~~q~T---Y~tHpWif 66 (160)
T 1lm8_V 15 SREPSQVIFCNRSPRVVLPVWLNFDGEPQPY---PTLPPGTGRRIHS---YRGHLWLF 66 (160)
T ss_dssp CCCEEEEEEEECSSSCEEEEEECTTSCEEEC---CCBCTTEEEEEEE---ETTCEEEE
T ss_pred CCceEEEEEEeCCCCeEEEEEECCCCCEEEe---eeeCCCCEEeCCC---cCCCcEEE
Confidence 4556899999999999999998777765432 2599999887753 34555543
No 12
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=27.13 E-value=17 Score=29.28 Aligned_cols=18 Identities=44% Similarity=0.857 Sum_probs=15.3
Q ss_pred CcccccCCCCCCCccccCC
Q 025403 88 QTFSCVTGDCGSQKLECAG 106 (253)
Q Consensus 88 g~~~C~TGdC~~g~~~C~~ 106 (253)
|.+.|+-|||| |.|.|..
T Consensus 97 g~G~~epGDCG-G~L~C~H 114 (142)
T 2hrv_A 97 GEGPCEPGDCG-GKLLCKH 114 (142)
T ss_dssp EECCCCTTCTT-CEEEETT
T ss_pred EEcCCCCCCCC-ceeeeCC
Confidence 45789999999 9999973
No 13
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=25.65 E-value=68 Score=27.85 Aligned_cols=45 Identities=11% Similarity=0.200 Sum_probs=24.3
Q ss_pred cceEEEEEeCCCCccccee--ecCCCC-------CCC--CCCCeeecCCCEEEEec
Q 025403 24 EPASFKMVNKCRRTVWPGL--LSGANS-------PPL--PTTGFELKSGKSRTITI 68 (253)
Q Consensus 24 ~a~t~tv~N~C~~tVw~~~--~~~~g~-------~~~--~~~g~~L~~G~s~s~~v 68 (253)
.+.+|+|.|+=..++-.-+ ..+.+. .++ .+-=|+|+||+...+.|
T Consensus 44 k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI 99 (257)
T 3q48_A 44 REVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRI 99 (257)
T ss_dssp SEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEE
T ss_pred cEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEE
Confidence 4588999998776532221 111110 010 11236889998777654
No 14
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=25.52 E-value=20 Score=29.60 Aligned_cols=18 Identities=33% Similarity=0.416 Sum_probs=15.4
Q ss_pred CcccccCCCCCCCccccCC
Q 025403 88 QTFSCVTGDCGSQKLECAG 106 (253)
Q Consensus 88 g~~~C~TGdC~~g~~~C~~ 106 (253)
|.+.|+-|||| |.|.|..
T Consensus 117 ~~G~~epGDCG-G~L~C~H 134 (166)
T 1z8r_A 117 ATGFSEPGDAG-GILRCEH 134 (166)
T ss_dssp EECSSSCCCCB-SEEECSS
T ss_pred EecCCCCCCCC-ceeeeCC
Confidence 45789999999 9999984
No 15
>4dz1_A DALS D-alanine transporter; D-alanine binding, periplasmic, transport protein; 1.90A {Salmonella enterica} PDB: 3r39_A 4f3s_A
Probab=23.72 E-value=25 Score=28.68 Aligned_cols=9 Identities=11% Similarity=0.080 Sum_probs=0.0
Q ss_pred CcchhhHHH
Q 025403 1 MDRRRLLSA 9 (253)
Q Consensus 1 m~~~~~~~~ 9 (253)
||.+.+.++
T Consensus 1 Mmk~~~~~~ 9 (259)
T 4dz1_A 1 MLSKKFGLS 9 (259)
T ss_dssp ---------
T ss_pred CcHHHHHHH
Confidence 777655543
No 16
>3qax_A Probable ABC transporter arginine-binding protein; periplasmic, transport PR; HET: ARG; 2.00A {Chlamydophila pneumoniae} PDB: 3g41_A* 3n26_A*
Probab=23.50 E-value=24 Score=28.36 Aligned_cols=7 Identities=14% Similarity=-0.202 Sum_probs=0.0
Q ss_pred CcchhhH
Q 025403 1 MDRRRLL 7 (253)
Q Consensus 1 m~~~~~~ 7 (253)
||.+...
T Consensus 1 mMk~~~~ 7 (268)
T 3qax_A 1 MIKQIGR 7 (268)
T ss_dssp -------
T ss_pred CcchHHH
Confidence 7765533
No 17
>2qn4_A RASI, alpha-amylase/subtilisin inhibitor; amylase inhibitor, alpha- amylase inhibitor, protease inhibitor, serine protease inhibitor; 1.80A {Oryza sativa subsp}
Probab=23.09 E-value=35 Score=28.73 Aligned_cols=23 Identities=35% Similarity=0.444 Sum_probs=16.8
Q ss_pred CCCCCCCeeecCCCEEEEecCCCC
Q 025403 49 PPLPTTGFELKSGKSRTITIPKSW 72 (253)
Q Consensus 49 ~~~~~~g~~L~~G~s~s~~vp~~W 72 (253)
+.+...|-+|++|..+-| +|..|
T Consensus 26 pVlD~~G~~l~~G~~YyI-~p~~~ 48 (200)
T 2qn4_A 26 PVYDTEGHELSADGSYYV-LPASP 48 (200)
T ss_dssp BCBCTTSCBCBTTSCEEE-EESST
T ss_pred ceEeCCCCCCcCCCcEEE-EeCcc
Confidence 445567999999998766 46655
No 18
>1ok0_A Tendamistat, alpha-amylase inhibitor HOE-467A; 0.93A {Streptomyces tendae} SCOP: b.5.1.1 PDB: 1bvn_T 1hoe_A 2ait_A 3ait_A 4ait_A
Probab=22.87 E-value=1.3e+02 Score=21.29 Aligned_cols=38 Identities=16% Similarity=0.205 Sum_probs=27.0
Q ss_pred EEEEEeCCCCcccceeecCCCCCCCCCCCeeecCCCEEEEe
Q 025403 27 SFKMVNKCRRTVWPGLLSGANSPPLPTTGFELKSGKSRTIT 67 (253)
Q Consensus 27 t~tv~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~ 67 (253)
=-.+.|.|+.++-+-+.=..|... --..++||+-.+|-
T Consensus 20 YT~V~N~Cs~tvsVtV~Y~dG~~~---PCrv~~PG~~~Tfg 57 (74)
T 1ok0_A 20 YSQADNGCAETVTVKVVYEDDTEG---LCYAVAPGQITTVG 57 (74)
T ss_dssp EEEEEECSSSCEEEEEEETTSCBC---CCEEECTTCEEEEE
T ss_pred EEeecCCCcccEEEEEEEeCCCcc---eeEEeCCCceEEec
Confidence 345899999999887765555321 14788999987774
No 19
>2xx6_A SPBC2 prophage-derived deoxyuridine 5'-triphospha nucleotidohydrolase YOSS; 1.74A {Bacillus subtilis} PDB: 2baz_A 2xy3_A* 2y1t_A* 2xcd_A 2xce_A*
Probab=22.51 E-value=68 Score=25.30 Aligned_cols=28 Identities=11% Similarity=0.386 Sum_probs=22.2
Q ss_pred CeeecCCCEE------EEecCCCCceeeeeeccc
Q 025403 55 GFELKSGKSR------TITIPKSWSGRIWARTLC 82 (253)
Q Consensus 55 g~~L~~G~s~------s~~vp~~WsGriWaRtgC 82 (253)
.+.|+||+.. .+.+|.++.|+|++|.+-
T Consensus 31 ~~~i~Pg~~~lv~Tg~~i~iP~g~~~~i~pRSgl 64 (142)
T 2xx6_A 31 DVAIKKDEFKLVPLGVAMELPEGYEAHVVPRSST 64 (142)
T ss_dssp CEEECTTCEEEEECCEEEECCTTEEEEEEECTTH
T ss_pred CeEECCCCEEEEEcCEEEECCCCeEEEEEeCCCc
Confidence 4788888764 556899999999999654
Done!