Query 025404
Match_columns 253
No_of_seqs 300 out of 3254
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 09:36:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025404.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025404hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i13_A AART; DNA binding, zinc 99.9 3E-24 1E-28 167.8 3.9 137 9-155 16-177 (190)
2 2i13_A AART; DNA binding, zinc 99.9 3.6E-23 1.2E-27 161.7 5.3 118 10-129 45-187 (190)
3 1tf6_A Protein (transcription 99.9 1.8E-22 6.2E-27 157.6 7.2 134 9-155 7-180 (190)
4 2dlq_A GLI-kruppel family memb 99.8 9.9E-21 3.4E-25 137.3 6.8 111 9-125 2-116 (124)
5 2lt7_A Transcriptional regulat 99.8 5E-21 1.7E-25 140.9 4.9 86 10-109 18-109 (133)
6 1wlj_A Interferon stimulated g 99.8 3.4E-20 1.2E-24 144.7 7.7 102 134-250 4-105 (189)
7 2jp9_A Wilms tumor 1; DNA bind 99.8 2.8E-20 9.4E-25 134.0 5.6 102 10-125 2-118 (119)
8 1tf6_A Protein (transcription 99.8 6.7E-20 2.3E-24 143.0 7.3 115 11-127 39-188 (190)
9 2gli_A Protein (five-finger GL 99.8 1E-19 3.4E-24 137.2 6.5 124 12-155 1-146 (155)
10 1ubd_C Protein (YY1 zinc finge 99.8 1.3E-19 4.5E-24 131.5 6.8 105 11-128 2-119 (124)
11 2ee8_A Protein ODD-skipped-rel 99.8 1.5E-18 5.2E-23 122.4 9.4 91 5-109 8-104 (106)
12 2rpc_A Zinc finger protein ZIC 99.7 9.9E-19 3.4E-23 131.8 6.2 109 10-129 21-148 (155)
13 2dmd_A Zinc finger protein 64, 99.7 2.9E-18 9.9E-23 118.7 7.0 86 9-108 3-94 (96)
14 1a1h_A QGSR zinc finger peptid 99.7 5.5E-18 1.9E-22 115.8 4.5 82 11-106 1-90 (90)
15 1wjp_A Zinc finger protein 295 99.7 2E-17 6.8E-22 116.9 7.4 92 4-111 6-103 (107)
16 2gui_A DNA polymerase III epsi 99.7 1.4E-17 4.9E-22 130.3 5.0 95 135-246 9-113 (194)
17 2yt9_A Zinc finger-containing 99.7 5.9E-17 2E-21 111.8 6.6 82 9-104 2-92 (95)
18 2p1j_A POLIII, DNA polymerase 99.7 4.4E-17 1.5E-21 126.7 6.4 95 134-245 11-109 (186)
19 2igi_A Oligoribonuclease; RNAs 99.7 2.1E-17 7.1E-22 127.9 3.9 104 135-248 5-120 (180)
20 2lt7_A Transcriptional regulat 99.7 1.8E-17 6.1E-22 121.8 3.1 102 32-149 12-122 (133)
21 2kmk_A Zinc finger protein GFI 99.7 4.5E-17 1.5E-21 109.1 4.6 76 14-103 1-82 (82)
22 1ubd_C Protein (YY1 zinc finge 99.6 1.5E-16 5.1E-21 115.2 6.3 85 11-107 31-123 (124)
23 2gli_A Protein (five-finger GL 99.6 3.5E-16 1.2E-20 117.6 6.5 107 9-127 29-154 (155)
24 2ebt_A Krueppel-like factor 5; 99.6 1.2E-15 4.2E-20 106.1 7.9 86 4-103 5-100 (100)
25 2csh_A Zinc finger protein 297 99.6 5.2E-16 1.8E-20 110.0 5.7 81 9-104 5-91 (110)
26 2dmi_A Teashirt homolog 3; zin 99.6 6.1E-16 2.1E-20 110.6 5.9 87 10-108 15-110 (115)
27 1w0h_A 3'-5' exonuclease ERI1; 99.6 7.9E-16 2.7E-20 121.3 5.8 104 134-245 9-123 (204)
28 4gzn_C ZFP-57, zinc finger pro 99.6 4.2E-16 1.4E-20 97.9 3.2 50 11-62 1-51 (60)
29 2jp9_A Wilms tumor 1; DNA bind 99.6 7.5E-16 2.6E-20 110.5 4.9 79 11-101 33-119 (119)
30 2gbz_A Oligoribonuclease; ORN, 99.6 4.6E-16 1.6E-20 121.7 3.0 101 133-249 7-125 (194)
31 1zbh_A 3'-5' exonuclease ERI1; 99.6 1.1E-15 3.7E-20 127.3 5.0 104 134-245 77-191 (299)
32 1llm_C Chimera of ZIF23-GCN4; 99.6 2E-16 6.9E-21 107.7 -0.1 81 12-102 1-82 (88)
33 3mxm_B Three prime repair exon 99.6 1.1E-15 3.7E-20 123.5 3.4 102 134-250 11-141 (242)
34 2xri_A ERI1 exoribonuclease 3; 99.6 1.5E-15 5E-20 121.5 3.8 95 135-244 31-142 (224)
35 3u3y_B Three prime repair exon 99.5 1.8E-15 6.1E-20 125.5 3.8 106 134-250 11-141 (314)
36 3tr8_A Oligoribonuclease; tran 99.5 1.4E-15 4.8E-20 117.5 3.0 107 133-249 7-125 (186)
37 1zbu_A ERI-1 homolog, 3'-5' ex 99.5 1.4E-15 5E-20 128.6 2.8 104 134-245 127-241 (349)
38 2dlq_A GLI-kruppel family memb 99.5 8E-15 2.7E-19 105.8 6.3 83 11-105 32-122 (124)
39 2wbs_A Krueppel-like factor 4; 99.5 5.2E-15 1.8E-19 100.5 4.9 78 11-102 2-89 (89)
40 2dlk_A Novel protein; ZF-C2H2 99.5 9.3E-15 3.2E-19 97.1 5.9 67 9-77 2-79 (79)
41 1y97_A Three prime repair exon 99.5 4.1E-14 1.4E-18 114.1 7.1 103 133-246 8-132 (238)
42 2dmi_A Teashirt homolog 3; zin 99.5 7.4E-16 2.5E-20 110.1 -3.0 93 28-128 5-105 (115)
43 2f96_A Ribonuclease T; RNAse, 99.5 2.3E-14 8E-19 114.5 5.2 106 134-245 28-143 (224)
44 2j7j_A Transcription factor II 99.5 2E-14 6.8E-19 96.6 4.0 74 14-102 1-85 (85)
45 2rpc_A Zinc finger protein ZIC 99.5 7.4E-14 2.5E-18 104.9 6.8 107 41-159 22-142 (155)
46 3cg7_A CRN-4, cell death-relat 99.5 2E-14 6.7E-19 120.0 3.4 95 135-244 19-131 (308)
47 2dmd_A Zinc finger protein 64, 99.4 7.4E-14 2.5E-18 96.2 5.4 80 39-130 3-91 (96)
48 2ghf_A ZHX1, zinc fingers and 99.4 5.9E-14 2E-18 97.8 3.9 69 8-112 12-85 (102)
49 4gzn_C ZFP-57, zinc finger pro 99.4 4.6E-14 1.6E-18 88.5 2.8 51 42-104 2-58 (60)
50 2cot_A Zinc finger protein 435 99.4 3E-13 1E-17 89.3 6.9 64 9-109 13-77 (77)
51 1wjp_A Zinc finger protein 295 99.4 9.7E-14 3.3E-18 97.7 3.9 81 33-128 7-95 (107)
52 3v9w_A Ribonuclease T; DEDD nu 99.4 9.7E-14 3.3E-18 111.7 4.3 107 134-246 36-152 (235)
53 2ee8_A Protein ODD-skipped-rel 99.4 5.4E-13 1.8E-17 93.6 6.0 79 39-129 12-99 (106)
54 2lce_A B-cell lymphoma 6 prote 99.4 5E-13 1.7E-17 87.6 5.1 64 8-107 11-74 (74)
55 1a1h_A QGSR zinc finger peptid 99.4 2.9E-13 9.8E-18 92.0 3.6 75 42-128 2-87 (90)
56 2qxf_A Exodeoxyribonuclease I; 99.4 2.9E-13 9.9E-18 118.9 4.5 97 134-246 8-115 (482)
57 2lv2_A Insulinoma-associated p 99.4 6.6E-13 2.3E-17 89.3 5.1 53 9-63 23-76 (85)
58 2kmk_A Zinc finger protein GFI 99.4 2.3E-13 7.9E-18 90.7 2.5 71 45-127 3-81 (82)
59 2csh_A Zinc finger protein 297 99.3 2.2E-13 7.4E-18 96.3 2.3 76 39-127 5-89 (110)
60 1x6h_A Transcriptional repress 99.3 1.3E-12 4.4E-17 87.9 5.9 65 31-109 4-78 (86)
61 3uk3_C Zinc finger protein 217 99.3 4.6E-13 1.6E-17 82.9 3.2 51 11-63 1-52 (57)
62 2yt9_A Zinc finger-containing 99.3 1E-12 3.4E-17 90.2 4.9 77 39-127 2-90 (95)
63 1x5w_A Zinc finger protein 64, 99.3 1.6E-12 5.4E-17 84.1 5.2 49 9-59 4-53 (70)
64 1x6h_A Transcriptional repress 99.3 6.7E-13 2.3E-17 89.3 3.4 66 9-76 10-85 (86)
65 2gqj_A Zinc finger protein KIA 99.3 2.5E-13 8.5E-18 94.2 0.9 71 24-108 6-84 (98)
66 2wbt_A B-129; zinc finger; 2.7 99.3 3.3E-13 1.1E-17 98.2 1.4 104 8-128 6-125 (129)
67 2cot_A Zinc finger protein 435 99.3 1.4E-12 4.9E-17 86.0 3.8 49 81-129 21-72 (77)
68 2ctd_A Zinc finger protein 512 99.3 2.2E-12 7.6E-17 89.0 4.7 73 22-108 14-93 (96)
69 2lce_A B-cell lymphoma 6 prote 99.3 3.1E-12 1E-16 83.7 4.4 49 81-129 20-71 (74)
70 1x6e_A Zinc finger protein 24; 99.3 4.6E-12 1.6E-16 82.4 5.1 52 9-62 9-61 (72)
71 2adr_A ADR1; transcription reg 99.3 4E-12 1.4E-16 79.5 4.2 49 13-63 1-50 (60)
72 2ebt_A Krueppel-like factor 5; 99.3 4.5E-12 1.5E-16 87.7 4.6 76 42-127 13-99 (100)
73 2wbs_A Krueppel-like factor 4; 99.2 3.5E-12 1.2E-16 86.3 3.9 72 45-126 7-88 (89)
74 2drp_A Protein (tramtrack DNA- 99.2 2.6E-12 9E-17 82.0 3.0 53 10-63 6-60 (66)
75 2ej4_A Zinc finger protein ZIC 99.2 1.4E-11 4.7E-16 84.5 6.8 69 14-110 25-94 (95)
76 2wbt_A B-129; zinc finger; 2.7 99.2 1.7E-12 5.7E-17 94.5 1.8 79 11-104 38-126 (129)
77 2d9h_A Zinc finger protein 692 99.2 3.4E-12 1.2E-16 84.3 2.9 51 10-62 3-57 (78)
78 1x5w_A Zinc finger protein 64, 99.2 7.5E-12 2.6E-16 80.9 4.0 58 39-108 4-67 (70)
79 1bbo_A Human enhancer-binding 99.2 1E-11 3.6E-16 76.7 4.2 48 14-63 1-49 (57)
80 2ctu_A Zinc finger protein 483 99.2 4.8E-14 1.6E-18 92.0 -7.1 68 28-111 4-72 (73)
81 2ghf_A ZHX1, zinc fingers and 99.2 4.8E-12 1.6E-16 88.1 2.7 59 81-147 21-87 (102)
82 2eps_A POZ-, at HOOK-, and zin 99.2 1.5E-11 5E-16 75.3 4.3 46 8-55 6-53 (54)
83 1x6e_A Zinc finger protein 24; 99.2 9.8E-12 3.3E-16 80.8 3.4 60 33-106 5-70 (72)
84 2ct1_A Transcriptional repress 99.2 4.6E-12 1.6E-16 83.5 1.6 23 81-103 48-70 (77)
85 2ctd_A Zinc finger protein 512 99.2 1.1E-11 3.9E-16 85.4 3.5 50 11-63 31-83 (96)
86 2ct1_A Transcriptional repress 99.2 1.9E-11 6.6E-16 80.5 4.4 53 9-63 10-65 (77)
87 2gqj_A Zinc finger protein KIA 99.1 1.6E-11 5.5E-16 84.9 3.3 52 10-63 20-74 (98)
88 2dlk_A Novel protein; ZF-C2H2 99.1 3.8E-11 1.3E-15 79.3 4.7 63 39-113 2-78 (79)
89 1f2i_G Fusion of N-terminal 17 99.1 4E-11 1.4E-15 78.0 4.3 53 9-63 14-69 (73)
90 2j7j_A Transcription factor II 99.1 4E-11 1.4E-15 80.2 3.4 70 45-126 3-84 (85)
91 1llm_C Chimera of ZIF23-GCN4; 99.1 5.3E-12 1.8E-16 85.5 -1.0 72 42-126 1-81 (88)
92 2epr_A POZ-, at HOOK-, and zin 99.1 1.1E-10 3.7E-15 69.5 4.4 42 8-51 6-48 (48)
93 2drp_A Protein (tramtrack DNA- 99.1 5.4E-11 1.9E-15 75.8 2.6 53 39-103 5-65 (66)
94 2epa_A Krueppel-like factor 10 99.1 1.9E-10 6.7E-15 74.5 5.3 57 5-63 8-69 (72)
95 2lv2_A Insulinoma-associated p 99.0 7.5E-11 2.6E-15 79.2 3.0 54 39-104 23-83 (85)
96 2d9h_A Zinc finger protein 692 99.0 2.8E-10 9.5E-15 75.0 4.1 58 39-108 2-69 (78)
97 3uk3_C Zinc finger protein 217 99.0 2.3E-10 8E-15 70.5 3.2 46 45-102 6-56 (57)
98 1bbo_A Human enhancer-binding 99.0 2.8E-10 9.7E-15 70.1 3.3 49 45-105 3-56 (57)
99 2epq_A POZ-, at HOOK-, and zin 98.9 5.2E-10 1.8E-14 65.4 3.5 40 9-50 5-45 (45)
100 2eod_A TNF receptor-associated 98.9 2.4E-10 8.3E-15 72.8 2.1 51 9-63 5-57 (66)
101 2ytn_A Zinc finger protein 347 98.9 8.3E-10 2.8E-14 64.8 3.8 39 9-49 7-46 (46)
102 2elz_A Zinc finger protein 224 98.9 8.2E-10 2.8E-14 64.9 3.7 39 9-49 7-46 (46)
103 2el4_A Zinc finger protein 268 98.9 8.3E-10 2.8E-14 64.8 3.6 39 9-49 7-46 (46)
104 2emf_A Zinc finger protein 484 98.9 8E-10 2.7E-14 64.9 3.5 39 9-49 7-46 (46)
105 2em0_A Zinc finger protein 224 98.9 9E-10 3.1E-14 64.7 3.6 39 9-49 7-46 (46)
106 2ytq_A Zinc finger protein 268 98.9 1.5E-09 5E-14 63.8 4.5 39 9-49 7-46 (46)
107 1f2i_G Fusion of N-terminal 17 98.9 4.5E-10 1.6E-14 72.9 2.2 62 28-102 4-73 (73)
108 2emk_A Zinc finger protein 28 98.9 8.3E-10 2.8E-14 64.9 3.2 39 9-49 7-46 (46)
109 2ene_A Zinc finger protein 347 98.9 8.7E-10 3E-14 64.7 3.2 39 9-49 7-46 (46)
110 2eop_A Zinc finger protein 268 98.9 1E-09 3.6E-14 64.4 3.5 39 9-49 7-46 (46)
111 2eoe_A Zinc finger protein 347 98.9 9.4E-10 3.2E-14 64.5 3.3 39 9-49 7-46 (46)
112 2eq0_A Zinc finger protein 347 98.9 8.7E-10 3E-14 64.7 3.1 39 9-49 7-46 (46)
113 2epz_A Zinc finger protein 28 98.9 1.7E-09 5.6E-14 63.5 4.3 39 9-49 7-46 (46)
114 2enc_A Zinc finger protein 224 98.9 9.6E-10 3.3E-14 64.5 3.3 39 9-49 7-46 (46)
115 2emx_A Zinc finger protein 268 98.9 7.2E-10 2.5E-14 64.4 2.7 39 9-49 5-44 (44)
116 2eml_A Zinc finger protein 28 98.9 9.2E-10 3.1E-14 64.6 3.2 39 9-49 7-46 (46)
117 2em7_A Zinc finger protein 224 98.9 1.6E-09 5.5E-14 63.5 4.3 39 9-49 7-46 (46)
118 2eoq_A Zinc finger protein 224 98.9 1E-09 3.5E-14 64.4 3.4 39 9-49 7-46 (46)
119 2ep2_A Zinc finger protein 484 98.9 9.6E-10 3.3E-14 64.5 3.2 39 9-49 7-46 (46)
120 2eq4_A Zinc finger protein 224 98.9 2E-09 7E-14 63.1 4.6 39 9-49 7-46 (46)
121 2ytr_A Zinc finger protein 347 98.9 1E-09 3.6E-14 64.3 3.2 39 9-49 7-46 (46)
122 2ema_A Zinc finger protein 347 98.9 9.4E-10 3.2E-14 64.6 3.0 39 9-49 7-46 (46)
123 2ysp_A Zinc finger protein 224 98.9 9.5E-10 3.3E-14 64.6 3.0 39 9-49 7-46 (46)
124 2em5_A ZFP-95, zinc finger pro 98.9 1.1E-09 3.7E-14 64.4 3.2 39 9-49 7-46 (46)
125 2em9_A Zinc finger protein 224 98.9 1.2E-09 4E-14 64.1 3.4 39 9-49 7-46 (46)
126 2en8_A Zinc finger protein 224 98.9 1.1E-09 3.7E-14 64.3 3.2 39 9-49 7-46 (46)
127 2emm_A ZFP-95, zinc finger pro 98.9 8.8E-10 3E-14 64.7 2.7 39 9-49 7-46 (46)
128 2ytj_A Zinc finger protein 484 98.9 1.1E-09 3.9E-14 64.2 3.2 39 9-49 7-46 (46)
129 2emy_A Zinc finger protein 268 98.9 9.2E-10 3.1E-14 64.6 2.7 39 9-49 7-46 (46)
130 2el6_A Zinc finger protein 268 98.9 1.9E-09 6.6E-14 63.2 4.2 39 9-49 7-46 (46)
131 2ep0_A Zinc finger protein 28 98.9 1.9E-09 6.4E-14 63.3 4.1 40 8-49 6-46 (46)
132 2eov_A Zinc finger protein 484 98.9 1.2E-09 4.1E-14 64.1 3.1 39 9-49 7-46 (46)
133 2ytd_A Zinc finger protein 473 98.9 1E-09 3.5E-14 64.4 2.8 39 9-49 7-46 (46)
134 2en1_A Zinc finger protein 224 98.9 1.3E-09 4.4E-14 64.0 3.2 39 9-49 7-46 (46)
135 2ytk_A Zinc finger protein 347 98.9 1E-09 3.5E-14 64.4 2.8 39 9-49 7-46 (46)
136 2epx_A Zinc finger protein 28 98.9 1.5E-09 5.1E-14 64.0 3.5 39 9-49 7-47 (47)
137 2eme_A Zinc finger protein 473 98.9 1.3E-09 4.6E-14 63.9 3.3 39 9-49 7-46 (46)
138 2eoo_A ZFP-95, zinc finger pro 98.9 8.1E-10 2.8E-14 64.9 2.3 39 9-49 7-46 (46)
139 2ytm_A Zinc finger protein 28 98.9 1.6E-09 5.6E-14 63.6 3.5 39 9-49 7-46 (46)
140 2en6_A Zinc finger protein 268 98.9 1E-09 3.6E-14 64.4 2.6 39 9-49 7-46 (46)
141 2epw_A Zinc finger protein 268 98.9 1E-09 3.6E-14 64.4 2.6 39 9-49 7-46 (46)
142 1x3c_A Zinc finger protein 292 98.9 2.7E-09 9.3E-14 67.4 4.5 43 4-48 17-63 (73)
143 2emh_A Zinc finger protein 484 98.9 9.1E-10 3.1E-14 64.6 2.3 39 9-49 7-46 (46)
144 2yso_A ZFP-95, zinc finger pro 98.8 1.2E-09 4.2E-14 64.1 2.8 39 9-49 7-46 (46)
145 2emp_A Zinc finger protein 347 98.8 1E-09 3.5E-14 64.4 2.3 39 9-49 7-46 (46)
146 2ytg_A ZFP-95, zinc finger pro 98.8 9.2E-10 3.2E-14 64.6 2.0 39 9-49 7-46 (46)
147 2em8_A Zinc finger protein 224 98.8 1.9E-09 6.5E-14 63.3 3.3 39 9-49 7-46 (46)
148 2ely_A Zinc finger protein 224 98.8 1.7E-09 6E-14 63.4 3.1 39 9-49 7-46 (46)
149 2yu8_A Zinc finger protein 347 98.8 8.6E-10 3E-14 64.7 1.6 39 9-49 7-46 (46)
150 2ep3_A Zinc finger protein 484 98.8 1.9E-09 6.7E-14 63.2 3.2 39 9-49 7-46 (46)
151 2ytt_A Zinc finger protein 473 98.8 1.9E-09 6.5E-14 63.3 2.9 39 9-49 7-46 (46)
152 1vd4_A Transcription initiatio 98.8 4.6E-10 1.6E-14 70.6 -0.3 49 9-62 9-58 (62)
153 2eod_A TNF receptor-associated 98.8 1.5E-09 5E-14 69.1 1.7 55 39-106 5-65 (66)
154 2em2_A Zinc finger protein 28 98.8 5.5E-09 1.9E-13 61.2 3.8 39 9-49 7-46 (46)
155 2enf_A Zinc finger protein 347 98.7 7.4E-09 2.5E-13 60.6 3.5 38 9-48 7-45 (46)
156 2adr_A ADR1; transcription reg 98.7 4.6E-09 1.6E-13 65.2 2.6 43 81-123 5-50 (60)
157 2yrm_A B-cell lymphoma 6 prote 98.7 8.6E-09 2.9E-13 59.5 3.6 38 9-48 5-43 (43)
158 2ept_A Zinc finger protein 32; 98.7 7.9E-09 2.7E-13 58.9 3.3 36 9-46 5-41 (41)
159 2ytp_A Zinc finger protein 484 98.7 6.9E-09 2.3E-13 60.8 3.1 38 9-48 7-45 (46)
160 2ctu_A Zinc finger protein 483 98.7 3.3E-10 1.1E-14 73.4 -3.0 55 9-72 13-73 (73)
161 2yti_A Zinc finger protein 347 98.7 7.9E-09 2.7E-13 60.5 3.3 38 9-48 7-45 (46)
162 2epu_A Zinc finger protein 32; 98.7 1.1E-08 3.8E-13 59.6 3.9 37 9-47 7-44 (45)
163 2yth_A Zinc finger protein 224 98.7 9.4E-09 3.2E-13 60.2 3.6 38 9-48 7-45 (46)
164 2emg_A Zinc finger protein 484 98.7 8.7E-09 3E-13 60.3 3.4 38 9-48 7-45 (46)
165 2el5_A Zinc finger protein 268 98.7 7.5E-09 2.6E-13 59.3 3.1 36 10-47 6-42 (42)
166 2em6_A Zinc finger protein 224 98.7 9.5E-09 3.3E-13 60.2 3.6 38 9-48 7-45 (46)
167 2yte_A Zinc finger protein 473 98.7 9.5E-09 3.3E-13 58.8 3.5 35 10-46 6-41 (42)
168 2eq2_A Zinc finger protein 347 98.7 8.8E-09 3E-13 60.3 3.4 38 9-48 7-45 (46)
169 2eon_A ZFP-95, zinc finger pro 98.7 1.4E-08 4.7E-13 59.5 4.2 38 9-48 7-45 (46)
170 2ytf_A Zinc finger protein 268 98.7 8E-09 2.8E-13 60.4 3.2 38 9-48 7-45 (46)
171 2yts_A Zinc finger protein 484 98.7 8.9E-09 3E-13 60.2 3.4 38 9-48 7-45 (46)
172 2em4_A Zinc finger protein 28 98.7 7E-09 2.4E-13 60.8 2.8 38 9-48 7-45 (46)
173 2emj_A Zinc finger protein 28 98.7 6.8E-09 2.3E-13 60.8 2.7 38 9-48 7-45 (46)
174 2eoh_A Zinc finger protein 28 98.7 1.1E-08 3.6E-13 60.0 3.5 37 9-47 7-44 (46)
175 2eos_A B-cell lymphoma 6 prote 98.7 1E-08 3.5E-13 58.7 3.3 36 9-46 6-42 (42)
176 2eom_A ZFP-95, zinc finger pro 98.7 1.5E-08 5.2E-13 59.3 4.0 38 9-48 7-45 (46)
177 2ent_A Krueppel-like factor 15 98.7 9.7E-09 3.3E-13 60.6 3.2 39 9-49 7-48 (48)
178 2en9_A Zinc finger protein 28 98.7 9.3E-09 3.2E-13 60.2 3.1 38 9-48 7-45 (46)
179 2eoj_A Zinc finger protein 268 98.7 9.6E-09 3.3E-13 59.5 3.1 37 9-47 7-44 (44)
180 2emi_A Zinc finger protein 484 98.7 9.6E-09 3.3E-13 60.1 3.1 38 9-48 7-45 (46)
181 2ep1_A Zinc finger protein 484 98.7 1.1E-08 3.8E-13 59.8 3.3 38 9-48 7-45 (46)
182 2eq1_A Zinc finger protein 347 98.7 1.1E-08 3.8E-13 59.8 3.3 38 9-48 7-45 (46)
183 2epc_A Zinc finger protein 32; 98.7 1E-08 3.5E-13 58.7 3.1 36 9-46 6-42 (42)
184 2ytb_A Zinc finger protein 32; 98.7 1E-08 3.6E-13 58.6 3.1 36 9-46 6-42 (42)
185 2eln_A Zinc finger protein 406 98.7 9.9E-09 3.4E-13 57.6 2.8 32 9-42 4-37 (38)
186 2enh_A Zinc finger protein 28 98.7 1.8E-08 6.2E-13 58.9 4.2 38 9-48 7-45 (46)
187 2eow_A Zinc finger protein 347 98.7 8.7E-09 3E-13 60.3 2.7 38 9-48 7-45 (46)
188 2yrj_A Zinc finger protein 473 98.7 1.1E-08 3.7E-13 59.9 3.1 38 9-48 7-45 (46)
189 2en7_A Zinc finger protein 268 98.7 1.2E-08 4.1E-13 59.0 3.2 37 9-47 7-44 (44)
190 2ej4_A Zinc finger protein ZIC 98.7 2.4E-08 8.1E-13 68.0 5.3 65 65-129 12-88 (95)
191 2eof_A Zinc finger protein 268 98.7 1.1E-08 3.9E-13 59.1 3.1 37 9-47 7-44 (44)
192 2em3_A Zinc finger protein 28 98.7 8.6E-09 2.9E-13 60.3 2.6 38 9-48 7-45 (46)
193 2emb_A Zinc finger protein 473 98.7 1.4E-08 4.6E-13 58.8 3.3 37 9-47 7-44 (44)
194 2ytn_A Zinc finger protein 347 98.7 1.2E-08 4E-13 59.7 3.0 30 81-110 15-44 (46)
195 2emx_A Zinc finger protein 268 98.7 9.7E-09 3.3E-13 59.5 2.5 30 81-110 13-42 (44)
196 2emf_A Zinc finger protein 484 98.7 1.1E-08 3.8E-13 59.9 2.8 29 82-110 16-44 (46)
197 2en2_A B-cell lymphoma 6 prote 98.7 8.3E-09 2.8E-13 59.1 2.2 36 9-46 6-42 (42)
198 2yto_A Zinc finger protein 484 98.7 1.1E-08 3.9E-13 59.8 2.8 37 9-47 7-44 (46)
199 2eq4_A Zinc finger protein 224 98.7 1.2E-08 4.2E-13 59.6 2.9 31 81-111 15-45 (46)
200 2elz_A Zinc finger protein 224 98.7 1.4E-08 4.6E-13 59.5 3.0 29 82-110 16-44 (46)
201 2epz_A Zinc finger protein 28 98.7 1.2E-08 4.2E-13 59.6 2.8 30 81-110 15-44 (46)
202 2emm_A ZFP-95, zinc finger pro 98.7 1.1E-08 3.9E-13 59.8 2.6 30 81-110 15-44 (46)
203 2emk_A Zinc finger protein 28 98.7 1.3E-08 4.4E-13 59.6 2.9 31 81-111 15-45 (46)
204 2eml_A Zinc finger protein 28 98.7 1.2E-08 4.1E-13 59.7 2.7 29 82-110 16-44 (46)
205 2em0_A Zinc finger protein 224 98.7 1.3E-08 4.5E-13 59.5 2.9 29 82-110 16-44 (46)
206 2ene_A Zinc finger protein 347 98.6 1.2E-08 4.1E-13 59.7 2.6 29 82-110 16-44 (46)
207 2emh_A Zinc finger protein 484 98.6 1.2E-08 4.1E-13 59.7 2.6 30 81-110 15-44 (46)
208 2eor_A Zinc finger protein 224 98.6 9.7E-09 3.3E-13 60.1 2.2 38 9-48 7-45 (46)
209 2eop_A Zinc finger protein 268 98.6 1.5E-08 5E-13 59.3 3.0 30 81-110 15-44 (46)
210 2ema_A Zinc finger protein 347 98.6 1.2E-08 4.3E-13 59.6 2.7 30 81-110 15-44 (46)
211 2eou_A Zinc finger protein 473 98.6 1.4E-08 4.7E-13 58.9 2.8 37 9-47 7-44 (44)
212 2emy_A Zinc finger protein 268 98.6 1.3E-08 4.5E-13 59.5 2.7 30 81-110 15-44 (46)
213 2eoz_A Zinc finger protein 473 98.6 1.1E-08 3.9E-13 59.8 2.5 37 9-47 7-44 (46)
214 2ytq_A Zinc finger protein 268 98.6 1.5E-08 5.1E-13 59.3 3.0 30 81-110 15-44 (46)
215 2eq3_A Zinc finger protein 347 98.6 1.6E-08 5.6E-13 59.1 3.1 37 9-47 7-44 (46)
216 2eoy_A Zinc finger protein 473 98.6 1.1E-08 3.8E-13 59.9 2.4 37 9-47 7-45 (46)
217 2ytr_A Zinc finger protein 347 98.6 1.4E-08 4.8E-13 59.4 2.8 29 82-110 16-44 (46)
218 2eq0_A Zinc finger protein 347 98.6 1.3E-08 4.4E-13 59.6 2.7 29 82-110 16-44 (46)
219 2eoo_A ZFP-95, zinc finger pro 98.6 1.2E-08 4.2E-13 59.7 2.6 30 81-110 15-44 (46)
220 2el4_A Zinc finger protein 268 98.6 1.4E-08 4.7E-13 59.4 2.7 29 82-110 16-44 (46)
221 2eov_A Zinc finger protein 484 98.6 1.4E-08 5E-13 59.3 2.8 30 81-110 15-44 (46)
222 2eoe_A Zinc finger protein 347 98.6 1.3E-08 4.6E-13 59.4 2.6 30 81-110 15-44 (46)
223 2eoq_A Zinc finger protein 224 98.6 1.4E-08 4.8E-13 59.4 2.7 31 81-111 15-45 (46)
224 2ytj_A Zinc finger protein 484 98.6 1.5E-08 5.2E-13 59.2 2.8 30 81-110 15-44 (46)
225 2em7_A Zinc finger protein 224 98.6 1.4E-08 4.9E-13 59.3 2.7 30 81-110 15-44 (46)
226 2en1_A Zinc finger protein 224 98.6 1.7E-08 5.8E-13 59.0 3.0 29 33-63 3-32 (46)
227 2eps_A POZ-, at HOOK-, and zin 98.6 2.4E-08 8.3E-13 60.7 3.8 39 39-77 7-52 (54)
228 2ytm_A Zinc finger protein 28 98.6 1.7E-08 5.7E-13 59.1 3.0 30 81-110 15-44 (46)
229 2ytk_A Zinc finger protein 347 98.6 1.4E-08 4.8E-13 59.4 2.6 30 81-110 15-44 (46)
230 2em9_A Zinc finger protein 224 98.6 1.5E-08 5E-13 59.3 2.7 28 83-110 17-44 (46)
231 2emp_A Zinc finger protein 347 98.6 1.3E-08 4.6E-13 59.5 2.5 30 81-110 15-44 (46)
232 2em5_A ZFP-95, zinc finger pro 98.6 1.4E-08 4.8E-13 59.4 2.6 29 82-110 16-44 (46)
233 2ytg_A ZFP-95, zinc finger pro 98.6 1.3E-08 4.4E-13 59.5 2.4 38 33-72 3-46 (46)
234 2yu5_A Zinc finger protein 473 98.6 1.3E-08 4.5E-13 58.9 2.4 37 9-47 7-44 (44)
235 2ep2_A Zinc finger protein 484 98.6 1.5E-08 5.2E-13 59.2 2.7 30 81-110 15-44 (46)
236 2ely_A Zinc finger protein 224 98.6 1.2E-08 4E-13 59.8 2.2 31 81-111 15-45 (46)
237 2ysp_A Zinc finger protein 224 98.6 1.5E-08 5E-13 59.3 2.6 29 82-110 16-44 (46)
238 2yu8_A Zinc finger protein 347 98.6 1.3E-08 4.4E-13 59.5 2.3 29 82-110 16-44 (46)
239 1yui_A GAGA-factor; complex (D 98.6 7.7E-09 2.6E-13 62.9 1.3 28 81-108 27-54 (54)
240 2elx_A Zinc finger protein 406 98.6 2.2E-08 7.6E-13 54.7 3.1 33 10-44 3-35 (35)
241 2ytd_A Zinc finger protein 473 98.6 1.6E-08 5.6E-13 59.1 2.6 30 81-110 15-44 (46)
242 2en6_A Zinc finger protein 268 98.6 1.7E-08 5.7E-13 59.0 2.7 30 81-110 15-44 (46)
243 2eme_A Zinc finger protein 473 98.6 1.7E-08 5.8E-13 59.0 2.7 29 82-110 16-44 (46)
244 2en8_A Zinc finger protein 224 98.6 1.7E-08 5.9E-13 59.0 2.7 29 82-110 16-44 (46)
245 2emz_A ZFP-95, zinc finger pro 98.6 1.2E-08 4.1E-13 59.7 1.9 37 9-47 7-44 (46)
246 1srk_A Zinc finger protein ZFP 98.6 2.4E-08 8.3E-13 54.6 3.1 33 10-44 3-35 (35)
247 2enc_A Zinc finger protein 224 98.6 1.8E-08 6.1E-13 58.9 2.6 30 81-110 15-44 (46)
248 2yso_A ZFP-95, zinc finger pro 98.6 1.9E-08 6.5E-13 58.8 2.7 30 81-110 15-44 (46)
249 1njq_A Superman protein; zinc- 98.6 2.6E-08 9E-13 56.0 3.1 33 10-44 2-34 (39)
250 2epw_A Zinc finger protein 268 98.6 1.6E-08 5.4E-13 59.1 2.2 30 81-110 15-44 (46)
251 2em8_A Zinc finger protein 224 98.6 2.1E-08 7.2E-13 58.7 2.6 30 81-110 15-44 (46)
252 2epv_A Zinc finger protein 268 98.6 2.9E-08 9.9E-13 57.5 3.2 36 9-46 7-43 (44)
253 2elo_A Zinc finger protein 406 98.6 2.4E-08 8.2E-13 55.3 2.7 34 9-44 4-37 (37)
254 2ep3_A Zinc finger protein 484 98.6 2.4E-08 8.1E-13 58.4 2.7 30 81-110 15-44 (46)
255 2el6_A Zinc finger protein 268 98.6 2.4E-08 8.1E-13 58.4 2.6 30 81-110 15-44 (46)
256 1vd4_A Transcription initiatio 98.6 4.3E-09 1.5E-13 66.1 -0.8 47 30-78 2-51 (62)
257 1x3c_A Zinc finger protein 292 98.6 4.9E-08 1.7E-12 61.7 3.8 37 64-110 25-62 (73)
258 2yte_A Zinc finger protein 473 98.6 4.3E-08 1.5E-12 56.0 3.2 30 81-110 13-42 (42)
259 2en3_A ZFP-95, zinc finger pro 98.5 1.5E-08 5.2E-13 59.2 1.1 36 10-47 8-44 (46)
260 2eox_A Zinc finger protein 473 98.5 1.7E-08 5.8E-13 58.4 1.3 36 9-46 7-43 (44)
261 1x6f_A Zinc finger protein 462 98.5 1E-08 3.5E-13 69.1 0.2 42 9-52 20-62 (88)
262 2em2_A Zinc finger protein 28 98.5 4.3E-08 1.5E-12 57.3 2.6 31 81-111 15-45 (46)
263 2epx_A Zinc finger protein 28 98.5 5E-08 1.7E-12 57.2 2.7 31 81-111 15-46 (47)
264 2elv_A Zinc finger protein 406 98.5 6.3E-08 2.1E-12 53.3 2.9 33 9-43 4-36 (36)
265 2epp_A POZ-, at HOOK-, and zin 98.5 7.6E-08 2.6E-12 61.0 3.4 41 9-51 8-48 (66)
266 1rim_A E6APC2 peptide; E6-bind 98.5 5.6E-08 1.9E-12 52.5 2.4 30 13-44 1-30 (33)
267 2eoh_A Zinc finger protein 28 98.5 8.9E-08 3E-12 55.9 3.3 31 81-111 15-45 (46)
268 2elq_A Zinc finger protein 406 98.5 8.8E-08 3E-12 52.7 3.1 33 9-43 4-36 (36)
269 2yrm_A B-cell lymphoma 6 prote 98.5 9.4E-08 3.2E-12 55.0 3.1 30 81-110 13-42 (43)
270 2eou_A Zinc finger protein 473 98.5 9.5E-08 3.3E-12 55.2 3.1 30 81-110 15-44 (44)
271 2elr_A Zinc finger protein 406 98.5 1.2E-07 4.1E-12 52.0 3.3 33 9-43 4-36 (36)
272 2epa_A Krueppel-like factor 10 98.5 6.2E-08 2.1E-12 62.4 2.4 40 84-123 25-69 (72)
273 2eom_A ZFP-95, zinc finger pro 98.5 1E-07 3.6E-12 55.6 3.1 30 81-110 15-44 (46)
274 2eof_A Zinc finger protein 268 98.5 9.9E-08 3.4E-12 55.0 3.0 30 81-110 15-44 (44)
275 2elt_A Zinc finger protein 406 98.5 1.2E-07 4E-12 52.0 3.1 33 9-43 4-36 (36)
276 1p7a_A BF3, BKLF, kruppel-like 98.4 1.3E-07 4.4E-12 52.3 3.3 32 9-42 6-37 (37)
277 2el5_A Zinc finger protein 268 98.4 8.1E-08 2.8E-12 54.8 2.4 30 81-110 13-42 (42)
278 2ep0_A Zinc finger protein 28 98.4 8.8E-08 3E-12 55.9 2.6 30 81-110 15-44 (46)
279 2enf_A Zinc finger protein 347 98.4 9.9E-08 3.4E-12 55.6 2.7 31 81-111 15-45 (46)
280 2els_A Zinc finger protein 406 98.4 1.1E-07 3.6E-12 52.3 2.7 33 9-43 4-36 (36)
281 2eox_A Zinc finger protein 473 98.4 5.9E-08 2E-12 56.0 1.7 30 81-110 15-44 (44)
282 2ytt_A Zinc finger protein 473 98.4 1.1E-07 3.7E-12 55.5 2.8 30 81-110 15-44 (46)
283 2eq2_A Zinc finger protein 347 98.4 1.1E-07 3.7E-12 55.5 2.8 31 81-111 15-45 (46)
284 2eon_A ZFP-95, zinc finger pro 98.4 1.2E-07 4E-12 55.4 2.9 31 81-111 15-45 (46)
285 2epr_A POZ-, at HOOK-, and zin 98.4 1.5E-07 5E-12 55.5 3.3 30 81-110 15-44 (48)
286 2epq_A POZ-, at HOOK-, and zin 98.4 1.4E-07 4.8E-12 54.7 3.2 31 81-111 13-43 (45)
287 2eoj_A Zinc finger protein 268 98.4 1E-07 3.6E-12 54.9 2.5 30 81-110 15-44 (44)
288 2em4_A Zinc finger protein 28 98.4 1E-07 3.5E-12 55.6 2.5 31 81-111 15-45 (46)
289 2emj_A Zinc finger protein 28 98.4 9.9E-08 3.4E-12 55.7 2.4 31 81-111 15-45 (46)
290 2ytp_A Zinc finger protein 484 98.4 1E-07 3.6E-12 55.6 2.5 31 81-111 15-45 (46)
291 2emg_A Zinc finger protein 484 98.4 1.3E-07 4.3E-12 55.2 2.9 31 81-111 15-45 (46)
292 2yti_A Zinc finger protein 347 98.4 1.1E-07 3.9E-12 55.4 2.6 31 81-111 15-45 (46)
293 2epu_A Zinc finger protein 32; 98.4 8.7E-08 3E-12 55.6 2.1 30 81-110 15-44 (45)
294 2em6_A Zinc finger protein 224 98.4 1.3E-07 4.4E-12 55.2 2.8 31 81-111 15-45 (46)
295 2eor_A Zinc finger protein 224 98.4 1.2E-07 4.1E-12 55.3 2.7 31 81-111 15-45 (46)
296 2yts_A Zinc finger protein 484 98.4 1.2E-07 3.9E-12 55.3 2.6 31 81-111 15-45 (46)
297 2yu5_A Zinc finger protein 473 98.4 1.3E-07 4.5E-12 54.5 2.8 30 81-110 15-44 (44)
298 2eow_A Zinc finger protein 347 98.4 1.2E-07 3.9E-12 55.3 2.5 31 81-111 15-45 (46)
299 2ep1_A Zinc finger protein 484 98.4 1.3E-07 4.3E-12 55.2 2.7 31 81-111 15-45 (46)
300 2em3_A Zinc finger protein 28 98.4 1.2E-07 4.1E-12 55.3 2.5 31 81-111 15-45 (46)
301 2en9_A Zinc finger protein 28 98.4 1.4E-07 4.8E-12 55.0 2.9 31 81-111 15-45 (46)
302 2ytb_A Zinc finger protein 32; 98.4 1.3E-07 4.3E-12 53.9 2.6 29 81-109 14-42 (42)
303 2eq1_A Zinc finger protein 347 98.4 1.3E-07 4.4E-12 55.2 2.7 31 81-111 15-45 (46)
304 2m0d_A Zinc finger and BTB dom 98.4 1.5E-07 5.1E-12 49.1 2.7 30 12-43 1-30 (30)
305 2elm_A Zinc finger protein 406 98.4 1.1E-07 3.8E-12 52.7 2.3 31 10-42 5-36 (37)
306 2ept_A Zinc finger protein 32; 98.4 9.2E-08 3.1E-12 54.3 1.9 29 81-109 13-41 (41)
307 2yth_A Zinc finger protein 224 98.4 1.4E-07 4.8E-12 55.0 2.8 31 81-111 15-45 (46)
308 2emi_A Zinc finger protein 484 98.4 1.3E-07 4.3E-12 55.2 2.5 31 81-111 15-45 (46)
309 2yrj_A Zinc finger protein 473 98.4 1.3E-07 4.4E-12 55.1 2.5 31 81-111 15-45 (46)
310 1rim_A E6APC2 peptide; E6-bind 98.4 1.8E-07 6.1E-12 50.5 2.8 28 81-108 5-32 (33)
311 2en2_A B-cell lymphoma 6 prote 98.4 1.3E-07 4.4E-12 53.9 2.3 29 81-109 14-42 (42)
312 2ytf_A Zinc finger protein 268 98.4 1.3E-07 4.6E-12 55.0 2.5 31 81-111 15-45 (46)
313 1va1_A Transcription factor SP 98.4 1.4E-07 4.8E-12 52.3 2.4 33 9-43 3-37 (37)
314 1yui_A GAGA-factor; complex (D 98.4 2.8E-08 9.6E-13 60.3 -0.6 40 22-63 4-44 (54)
315 2eos_A B-cell lymphoma 6 prote 98.4 1.4E-07 4.8E-12 53.8 2.5 29 81-109 14-42 (42)
316 2eoz_A Zinc finger protein 473 98.4 1.4E-07 4.9E-12 55.0 2.5 31 81-111 15-45 (46)
317 2en7_A Zinc finger protein 268 98.4 1.5E-07 5.3E-12 54.2 2.6 30 81-110 15-44 (44)
318 3iuf_A Zinc finger protein UBI 98.4 1.5E-07 5.2E-12 55.6 2.6 33 10-44 3-36 (48)
319 2epv_A Zinc finger protein 268 98.4 1.5E-07 5.1E-12 54.3 2.4 30 81-110 15-44 (44)
320 2kvg_A Zinc finger and BTB dom 98.4 1.6E-07 5.3E-12 48.1 2.2 27 12-40 1-27 (27)
321 2eq3_A Zinc finger protein 347 98.4 1.8E-07 6.1E-12 54.5 2.6 31 81-111 15-45 (46)
322 2epc_A Zinc finger protein 32; 98.4 1.6E-07 5.5E-12 53.5 2.3 29 81-109 14-42 (42)
323 2yto_A Zinc finger protein 484 98.4 1.4E-07 4.9E-12 55.0 2.1 31 81-111 15-45 (46)
324 2kvf_A Zinc finger and BTB dom 98.4 2E-07 6.9E-12 47.9 2.5 28 12-41 1-28 (28)
325 2elp_A Zinc finger protein 406 98.4 1E-07 3.6E-12 52.7 1.4 32 10-43 5-37 (37)
326 2emz_A ZFP-95, zinc finger pro 98.4 2E-07 6.8E-12 54.3 2.7 31 81-111 15-45 (46)
327 2kvh_A Zinc finger and BTB dom 98.4 2.1E-07 7.1E-12 47.5 2.4 27 12-40 1-27 (27)
328 2emb_A Zinc finger protein 473 98.3 2E-07 6.8E-12 53.7 2.5 30 81-110 15-44 (44)
329 1fv5_A First zinc finger of U- 98.3 1.9E-07 6.6E-12 51.5 2.3 28 9-36 3-30 (36)
330 2enh_A Zinc finger protein 28 98.3 2.1E-07 7.1E-12 54.2 2.6 31 81-111 15-45 (46)
331 2kfq_A FP1; protein, de novo p 98.3 3.1E-08 1.1E-12 53.1 -1.0 30 13-44 1-30 (32)
332 2d9k_A FLN29 gene product; zin 98.3 3.5E-08 1.2E-12 64.4 -1.1 39 11-53 14-53 (75)
333 2en3_A ZFP-95, zinc finger pro 98.3 1.9E-07 6.5E-12 54.4 2.0 31 81-111 15-45 (46)
334 1bhi_A CRE-BP1, ATF-2; CRE bin 98.3 2.1E-07 7E-12 51.8 2.1 33 10-44 2-36 (38)
335 1ard_A Yeast transcription fac 98.3 2.9E-07 1E-11 47.6 2.5 29 13-43 1-29 (29)
336 1rik_A E6APC1 peptide; E6-bind 98.3 2E-07 6.7E-12 48.3 1.8 29 13-43 1-29 (29)
337 1zfd_A SWI5; DNA binding motif 98.3 2.9E-07 1E-11 49.0 2.3 30 12-43 1-32 (32)
338 1sp2_A SP1F2; zinc finger, tra 98.3 4.5E-07 1.5E-11 47.9 2.9 29 13-43 1-31 (31)
339 2eoy_A Zinc finger protein 473 98.3 2.3E-07 8E-12 54.0 1.9 30 81-110 15-45 (46)
340 2d9k_A FLN29 gene product; zin 98.3 2.9E-07 9.9E-12 60.0 2.4 62 29-106 4-70 (75)
341 1njq_A Superman protein; zinc- 98.3 4.5E-07 1.5E-11 50.7 2.5 29 81-109 9-37 (39)
342 2m0f_A Zinc finger and BTB dom 98.3 3.1E-07 1.1E-11 47.4 1.7 29 13-43 1-29 (29)
343 2lvr_A Zinc finger and BTB dom 97.6 1.2E-07 4.1E-12 49.6 0.0 29 12-42 1-29 (30)
344 1x6f_A Zinc finger protein 462 98.2 4.8E-08 1.6E-12 65.9 -2.1 46 81-127 28-73 (88)
345 2lvt_A Zinc finger and BTB dom 97.6 1.3E-07 4.6E-12 49.1 0.0 28 13-42 1-28 (29)
346 2ent_A Krueppel-like factor 15 98.2 5.2E-07 1.8E-11 52.9 2.6 29 83-111 19-47 (48)
347 1paa_A Yeast transcription fac 98.2 5.1E-07 1.8E-11 47.1 2.2 29 13-43 1-30 (30)
348 1klr_A Zinc finger Y-chromosom 98.2 4.4E-07 1.5E-11 47.2 1.8 29 13-43 1-29 (30)
349 1znf_A 31ST zinc finger from X 98.2 8.4E-07 2.9E-11 45.0 2.8 27 14-42 1-27 (27)
350 2m0e_A Zinc finger and BTB dom 98.2 3.6E-07 1.2E-11 47.1 0.9 28 13-42 1-28 (29)
351 1fv5_A First zinc finger of U- 98.2 5.4E-07 1.8E-11 49.7 1.5 30 39-70 3-33 (36)
352 2lvu_A Zinc finger and BTB dom 97.4 3.2E-07 1.1E-11 46.3 0.0 24 13-36 1-24 (26)
353 2elx_A Zinc finger protein 406 98.1 1.6E-06 5.5E-11 46.9 2.6 26 81-106 10-35 (35)
354 2elo_A Zinc finger protein 406 98.1 1.9E-06 6.6E-11 47.3 2.6 26 81-106 12-37 (37)
355 2kfq_A FP1; protein, de novo p 98.0 1.1E-07 3.9E-12 50.9 -3.2 27 81-107 5-31 (32)
356 1ard_A Yeast transcription fac 98.0 3.8E-06 1.3E-10 43.1 2.7 25 81-105 5-29 (29)
357 1ncs_A Peptide M30F, transcrip 98.0 7.6E-07 2.6E-11 52.2 -0.1 32 10-43 14-47 (47)
358 1srk_A Zinc finger protein ZFP 98.0 2.7E-06 9.2E-11 46.0 2.1 26 81-106 10-35 (35)
359 2ab3_A ZNF29; zinc finger prot 98.0 3.3E-06 1.1E-10 43.4 2.2 27 13-41 1-29 (29)
360 1klr_A Zinc finger Y-chromosom 98.0 3.9E-06 1.4E-10 43.3 2.5 26 81-106 5-30 (30)
361 1rik_A E6APC1 peptide; E6-bind 97.9 3E-06 1E-10 43.6 1.7 26 80-105 4-29 (29)
362 2m0f_A Zinc finger and BTB dom 97.9 3.8E-06 1.3E-10 43.1 2.1 25 81-105 5-29 (29)
363 1bhi_A CRE-BP1, ATF-2; CRE bin 97.9 4E-06 1.4E-10 46.3 2.3 28 81-108 9-38 (38)
364 1p7a_A BF3, BKLF, kruppel-like 97.9 3.2E-06 1.1E-10 46.4 1.9 22 82-103 15-36 (37)
365 2m0d_A Zinc finger and BTB dom 97.9 5.3E-06 1.8E-10 42.8 2.2 25 81-105 6-30 (30)
366 1znf_A 31ST zinc finger from X 97.9 3.8E-06 1.3E-10 42.4 1.5 24 81-104 4-27 (27)
367 2elr_A Zinc finger protein 406 97.9 7.1E-06 2.4E-10 44.6 2.7 25 81-105 12-36 (36)
368 2m0e_A Zinc finger and BTB dom 97.9 5.2E-06 1.8E-10 42.5 2.0 25 81-105 5-29 (29)
369 2lvt_A Zinc finger and BTB dom 97.1 2E-06 6.9E-11 44.3 0.0 25 81-105 5-29 (29)
370 2els_A Zinc finger protein 406 97.9 7.6E-06 2.6E-10 44.5 2.4 25 81-105 12-36 (36)
371 2eln_A Zinc finger protein 406 97.9 7.9E-06 2.7E-10 45.5 2.5 22 83-104 16-37 (38)
372 1sp2_A SP1F2; zinc finger, tra 97.8 6.5E-06 2.2E-10 43.1 2.0 23 83-105 9-31 (31)
373 2elt_A Zinc finger protein 406 97.8 8.2E-06 2.8E-10 44.3 2.4 25 81-105 12-36 (36)
374 2elv_A Zinc finger protein 406 97.8 6.5E-06 2.2E-10 44.8 1.6 25 81-105 12-36 (36)
375 2elq_A Zinc finger protein 406 97.8 1.1E-05 3.7E-10 43.9 2.5 25 81-105 12-36 (36)
376 1zfd_A SWI5; DNA binding motif 97.8 1.2E-05 4E-10 42.4 2.1 25 81-105 6-32 (32)
377 2lvr_A Zinc finger and BTB dom 96.9 3.9E-06 1.3E-10 43.5 0.0 25 81-105 6-30 (30)
378 2elp_A Zinc finger protein 406 97.7 1.1E-05 3.9E-10 44.1 1.8 25 81-105 12-37 (37)
379 2elm_A Zinc finger protein 406 97.7 8.5E-06 2.9E-10 44.8 1.3 24 81-104 12-36 (37)
380 2kvh_A Zinc finger and BTB dom 97.7 1.7E-05 5.7E-10 40.0 2.0 22 81-102 6-27 (27)
381 2epp_A POZ-, at HOOK-, and zin 97.7 2.9E-05 1E-09 48.9 3.5 26 81-106 16-41 (66)
382 2kvf_A Zinc finger and BTB dom 97.7 1.2E-05 4.2E-10 40.8 1.4 23 81-103 6-28 (28)
383 1paa_A Yeast transcription fac 97.7 1.2E-05 4.1E-10 41.5 1.2 25 81-105 5-30 (30)
384 2kvg_A Zinc finger and BTB dom 97.6 1.4E-05 4.9E-10 40.3 1.2 22 81-102 6-27 (27)
385 1va1_A Transcription factor SP 97.6 2.4E-05 8.3E-10 42.8 2.1 23 83-105 15-37 (37)
386 2lvu_A Zinc finger and BTB dom 96.7 1.1E-05 3.9E-10 40.2 0.0 22 81-102 5-26 (26)
387 2ab3_A ZNF29; zinc finger prot 97.5 4.5E-05 1.5E-09 38.8 1.6 23 81-103 5-29 (29)
388 3iuf_A Zinc finger protein UBI 97.5 4.3E-05 1.5E-09 44.7 1.7 26 81-106 10-36 (48)
389 1ncs_A Peptide M30F, transcrip 97.3 7.1E-05 2.4E-09 43.4 1.3 23 83-105 25-47 (47)
390 1zr9_A Zinc finger protein 593 96.7 0.00058 2E-08 48.2 2.1 28 9-36 45-72 (124)
391 4hec_A Putative uncharacterize 96.6 0.0032 1.1E-07 48.1 5.3 102 132-245 19-123 (190)
392 1zw8_A Zinc-responsive transcr 96.4 0.0035 1.2E-07 38.9 3.9 56 18-101 7-63 (64)
393 2e72_A POGO transposable eleme 95.5 0.0075 2.6E-07 34.3 2.1 24 13-36 11-34 (49)
394 1zw8_A Zinc-responsive transcr 95.2 0.0088 3E-07 37.1 2.1 43 82-124 7-61 (64)
395 1zu1_A DSRBP-ZFA, RNA binding 94.9 0.024 8.1E-07 40.4 3.8 74 12-99 30-114 (127)
396 2e72_A POGO transposable eleme 94.8 0.022 7.7E-07 32.4 2.7 25 80-104 14-38 (49)
397 1zr9_A Zinc finger protein 593 94.6 0.012 4E-07 41.5 1.5 18 82-99 54-71 (124)
398 1x9m_A DNA polymerase; DNA plo 94.0 0.084 2.9E-06 48.6 6.1 69 137-244 1-70 (698)
399 2kfn_A Klenow fragment of DNA 93.9 0.12 4.3E-06 46.7 7.1 81 136-245 27-107 (605)
400 1zu1_A DSRBP-ZFA, RNA binding 90.8 0.31 1.1E-05 34.4 4.5 73 43-125 31-115 (127)
401 4ayb_P DNA-directed RNA polyme 88.7 0.18 6.2E-06 28.5 1.4 20 67-86 4-31 (48)
402 3mjh_B Early endosome antigen 87.9 0.43 1.5E-05 25.2 2.5 27 14-41 5-31 (34)
403 3hcs_A TNF receptor-associated 87.4 0.26 8.7E-06 36.7 2.0 60 45-106 84-164 (170)
404 1noy_A Protein (DNA polymerase 86.8 2 6.9E-05 36.4 7.6 37 197-244 187-224 (388)
405 1qht_A Protein (DNA polymerase 86.2 1.5 5.3E-05 40.8 6.9 86 133-244 133-220 (775)
406 2jsp_A Transcriptional regulat 85.3 0.28 9.7E-06 32.0 1.1 25 81-108 24-48 (87)
407 1s5j_A DNA polymerase I; repli 84.0 3.1 0.00011 39.1 8.0 95 132-244 187-288 (847)
408 2yuc_A TNF receptor-associated 82.5 1.4 4.8E-05 27.7 3.6 48 12-63 14-63 (76)
409 1fu9_A U-shaped transcriptiona 82.5 1.3 4.4E-05 23.5 2.7 26 11-36 5-30 (36)
410 2gmg_A Hypothetical protein PF 82.2 0.61 2.1E-05 31.5 1.8 26 45-76 69-94 (105)
411 3mjh_B Early endosome antigen 80.4 1.2 4.1E-05 23.5 2.1 20 81-100 8-27 (34)
412 3hcs_A TNF receptor-associated 78.0 0.77 2.6E-05 34.0 1.3 60 15-79 83-150 (170)
413 2gmg_A Hypothetical protein PF 77.9 0.84 2.9E-05 30.8 1.3 25 64-88 65-94 (105)
414 3jyw_9 60S ribosomal protein L 77.5 1.6 5.5E-05 27.3 2.5 25 65-89 25-55 (72)
415 3qex_A DNA polymerase, GP43; d 77.0 7.4 0.00025 36.8 7.9 99 133-243 106-226 (903)
416 2yrk_A Zinc finger homeobox pr 74.7 1.5 5.1E-05 25.6 1.6 20 15-34 14-33 (55)
417 2yqq_A Zinc finger HIT domain- 74.5 3.9 0.00013 24.2 3.4 37 68-105 14-50 (56)
418 2elu_A Zinc finger protein 406 74.2 2.7 9.3E-05 21.5 2.3 21 81-101 12-32 (37)
419 1vq8_Z 50S ribosomal protein L 73.9 0.62 2.1E-05 30.2 -0.1 26 65-90 26-57 (83)
420 2djr_A Zinc finger BED domain- 73.3 1.6 5.5E-05 27.7 1.7 24 81-104 31-61 (76)
421 2k5c_A Uncharacterized protein 72.3 0.78 2.7E-05 29.2 0.1 12 45-56 10-21 (95)
422 3iay_A DNA polymerase delta ca 71.2 5.4 0.00019 37.9 5.5 40 193-243 305-345 (919)
423 3j21_i 50S ribosomal protein L 70.6 1.7 5.9E-05 28.0 1.4 27 64-90 33-65 (83)
424 3izc_m 60S ribosomal protein R 68.2 2.4 8.2E-05 27.9 1.7 27 64-90 34-66 (92)
425 3iz5_m 60S ribosomal protein L 68.0 2.2 7.7E-05 28.0 1.5 26 65-90 35-66 (92)
426 1wjv_A Cell growth regulating 67.9 3.3 0.00011 26.3 2.3 21 81-102 13-33 (79)
427 3cc2_Z 50S ribosomal protein L 67.3 1.1 3.7E-05 30.8 -0.1 27 64-90 58-90 (116)
428 2jvx_A NF-kappa-B essential mo 63.9 3.9 0.00013 20.4 1.6 22 14-35 3-24 (28)
429 2jsp_A Transcriptional regulat 63.1 2.9 0.0001 27.2 1.4 27 13-44 20-46 (87)
430 2i5o_A DNA polymerase ETA; zin 61.6 2 6.9E-05 23.4 0.3 27 9-36 4-30 (39)
431 2czr_A TBP-interacting protein 61.1 1.7 6E-05 32.2 0.0 24 14-40 154-177 (226)
432 2a1r_A Poly(A)-specific ribonu 59.2 6.7 0.00023 33.7 3.3 17 227-243 280-296 (430)
433 1twf_L ABC10-alpha, DNA-direct 59.2 2.6 9E-05 26.2 0.6 10 45-54 30-39 (70)
434 1ffk_W Ribosomal protein L37AE 59.0 3.2 0.00011 26.1 1.0 26 65-90 26-57 (73)
435 2lcq_A Putative toxin VAPC6; P 59.0 2.2 7.4E-05 31.4 0.2 23 66-88 132-158 (165)
436 4a17_Y RPL37A, 60S ribosomal p 57.9 2.4 8.2E-05 28.4 0.3 26 65-90 35-66 (103)
437 3k59_A POL II, DNA polymerase 57.4 18 0.0006 33.7 6.0 39 195-244 198-237 (786)
438 3ikm_A DNA polymerase subunit 57.0 3.5 0.00012 39.4 1.2 22 227-248 193-214 (1172)
439 1joc_A EEA1, early endosomal a 54.9 4.3 0.00015 28.4 1.2 31 45-86 71-101 (125)
440 1z2q_A LM5-1; membrane protein 54.7 4.6 0.00016 26.0 1.2 25 45-76 23-47 (84)
441 3ga8_A HTH-type transcriptiona 53.8 9.8 0.00033 23.9 2.7 17 81-97 39-55 (78)
442 3sp4_A Aprataxin-like protein; 53.1 6.9 0.00024 29.9 2.2 22 80-101 171-193 (204)
443 2ct5_A Zinc finger BED domain 52.4 8.2 0.00028 24.2 2.1 24 81-104 32-58 (73)
444 1vk0_A Hypothetical protein; h 51.1 9.2 0.00031 29.2 2.6 27 207-245 99-125 (206)
445 1y02_A CARP2, FYVE-ring finger 51.0 4.8 0.00016 28.0 0.9 25 45-76 21-45 (120)
446 3saf_A Exosome component 10; e 50.5 18 0.0006 31.1 4.5 27 206-244 172-198 (428)
447 3h0g_L DNA-directed RNA polyme 49.5 7.8 0.00027 23.5 1.6 11 67-77 22-32 (63)
448 1vfy_A Phosphatidylinositol-3- 48.3 7 0.00024 24.3 1.3 30 45-85 13-42 (73)
449 3t7l_A Zinc finger FYVE domain 46.6 7.2 0.00025 25.5 1.2 25 45-76 22-46 (90)
450 1dvp_A HRS, hepatocyte growth 46.6 6.1 0.00021 30.5 1.0 9 45-53 163-171 (220)
451 6rxn_A Rubredoxin; electron tr 46.4 5 0.00017 22.7 0.3 10 45-54 6-15 (46)
452 2dkt_A Ring finger and CHY zin 45.0 6.3 0.00021 28.2 0.7 59 15-85 28-90 (143)
453 3zyq_A Hepatocyte growth facto 44.7 7 0.00024 30.4 1.0 10 45-54 166-175 (226)
454 2yw8_A RUN and FYVE domain-con 43.8 9 0.00031 24.5 1.3 31 45-86 21-51 (82)
455 4rxn_A Rubredoxin; electron tr 43.1 5.8 0.0002 23.3 0.3 10 45-54 5-14 (54)
456 3ttc_A HYPF, transcriptional r 42.9 1.9 6.6E-05 39.2 -2.8 31 45-76 69-99 (657)
457 3d45_A Poly(A)-specific ribonu 41.3 12 0.0004 32.9 2.1 17 227-243 275-291 (507)
458 3vth_A Hydrogenase maturation 40.9 2.4 8.2E-05 39.3 -2.5 30 45-75 163-192 (761)
459 1pft_A TFIIB, PFTFIIBN; N-term 40.5 14 0.00048 20.9 1.7 9 81-89 27-35 (50)
460 1e8j_A Rubredoxin; iron-sulfur 40.4 9.9 0.00034 22.0 1.0 10 45-54 5-14 (52)
461 2py5_A DNA polymerase; protein 39.8 25 0.00084 31.5 3.9 17 228-244 55-71 (575)
462 1wir_A Protein arginine N-meth 39.2 37 0.0013 23.5 3.9 27 10-36 11-37 (121)
463 4g9i_A Hydrogenase maturation 38.8 2.2 7.4E-05 39.7 -3.1 30 45-75 158-187 (772)
464 1x4u_A Zinc finger, FYVE domai 38.4 12 0.00041 23.9 1.3 30 45-85 16-45 (84)
465 2kdx_A HYPA, hydrogenase/ureas 38.3 7.9 0.00027 26.7 0.4 10 45-54 75-84 (119)
466 2jne_A Hypothetical protein YF 37.5 4 0.00014 27.0 -1.1 35 45-86 34-69 (101)
467 1wfk_A Zinc finger, FYVE domai 36.5 13 0.00045 24.1 1.2 31 45-86 11-41 (88)
468 2yu4_A E3 SUMO-protein ligase 36.1 43 0.0015 21.6 3.8 36 65-101 6-42 (94)
469 1gh9_A 8.3 kDa protein (gene M 35.7 7.7 0.00026 24.2 -0.0 8 81-89 24-31 (71)
470 3sp4_A Aprataxin-like protein; 35.2 16 0.00054 27.9 1.6 19 45-63 171-190 (204)
471 1yuz_A Nigerythrin; rubrythrin 34.7 14 0.00046 28.2 1.2 21 45-73 173-193 (202)
472 2e6m_A Werner syndrome ATP-dep 34.2 29 0.00099 26.0 3.1 28 206-245 86-113 (208)
473 2gv9_A DNA polymerase; polymer 33.5 29 0.001 34.0 3.5 39 195-244 395-434 (1193)
474 2apo_B Ribosome biogenesis pro 31.8 21 0.00073 21.3 1.5 21 69-89 9-29 (60)
475 2kn9_A Rubredoxin; metalloprot 31.4 8.8 0.0003 24.6 -0.3 10 45-54 29-38 (81)
476 1x4s_A Protein FON, zinc finge 31.3 23 0.0008 21.0 1.6 30 68-97 13-45 (59)
477 2k9h_A Glycoprotein; hantaviru 31.0 48 0.0017 19.3 2.8 17 46-62 6-22 (57)
478 2odx_A Cytochrome C oxidase po 30.3 13 0.00046 23.6 0.5 14 12-25 54-67 (80)
479 1yk4_A Rubredoxin, RD; electro 28.8 11 0.00037 21.9 -0.2 10 45-54 4-13 (52)
480 1wys_A Riken cDNA 2310008M20 p 28.6 15 0.0005 23.1 0.4 15 13-27 28-42 (75)
481 2v3b_B Rubredoxin 2, rubredoxi 28.3 11 0.00036 22.2 -0.3 10 45-54 5-14 (55)
482 3vk6_A E3 ubiquitin-protein li 28.2 1.1E+02 0.0038 20.3 4.6 18 83-100 66-83 (101)
483 3pv8_A DNA polymerase I; DNA p 28.0 25 0.00086 31.5 2.0 29 204-244 69-97 (592)
484 1rmd_A RAG1; V(D)J recombinati 27.6 55 0.0019 21.8 3.4 20 84-104 96-115 (116)
485 1wil_A KIAA1045 protein; ring 26.9 43 0.0015 21.5 2.3 11 45-55 31-41 (89)
486 3o9x_A Uncharacterized HTH-typ 26.5 46 0.0016 22.8 2.8 16 81-96 39-54 (133)
487 3a43_A HYPD, hydrogenase nicke 26.5 12 0.0004 26.7 -0.4 12 45-56 72-83 (139)
488 1dx8_A Rubredoxin; electron tr 26.5 15 0.00052 22.7 0.2 10 45-54 9-18 (70)
489 1lko_A Rubrerythrin all-iron(I 26.0 12 0.0004 28.2 -0.5 20 67-86 156-179 (191)
490 1x4v_A Hypothetical protein LO 24.9 23 0.0008 21.4 0.8 16 12-27 25-40 (63)
491 1v54_F VI, cytochrome C oxidas 24.7 20 0.00068 23.8 0.5 14 12-25 77-90 (98)
492 4ap4_A E3 ubiquitin ligase RNF 24.3 12 0.00043 25.6 -0.6 14 13-26 6-19 (133)
493 1s24_A Rubredoxin 2; electron 24.2 12 0.00043 24.2 -0.5 10 45-54 37-46 (87)
494 1wir_A Protein arginine N-meth 23.7 44 0.0015 23.1 2.2 23 81-103 18-40 (121)
495 2jrp_A Putative cytoplasmic pr 23.6 16 0.00056 23.3 -0.1 18 68-85 20-38 (81)
496 1yt3_A Ribonuclease D, RNAse D 23.4 54 0.0018 27.3 3.1 27 206-244 64-90 (375)
497 1z60_A TFIIH basal transcripti 23.0 9.6 0.00033 22.8 -1.2 24 45-76 17-40 (59)
498 4gmj_B CCR4-NOT transcription 22.9 1.8E+02 0.0063 23.2 6.0 15 134-148 33-47 (285)
499 3c6x_A Hydroxynitrilase; atomi 20.9 76 0.0026 24.1 3.4 32 198-237 51-82 (257)
500 1xkl_A SABP2, salicylic acid-b 20.8 1E+02 0.0036 23.6 4.2 40 188-236 42-82 (273)
No 1
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=99.89 E-value=3e-24 Score=167.82 Aligned_cols=137 Identities=25% Similarity=0.426 Sum_probs=108.1
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCccccccc--
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRG-- 80 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~-- 80 (253)
..+++||.|+.|++.|.....|..|++. |.++++ .|+.|++.|.+...|..|+ +++|.|+.|++.|....
T Consensus 16 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l 93 (190)
T 2i13_A 16 EPGEKPYACPECGKSFSRSDHLAEHQRT--HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANL 93 (190)
T ss_dssp ---------------CCSSHHHHHGGGC--C---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred cCCCCCCcCCCCccccCCHHHHHHHHHH--cCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHH
Confidence 3578999999999999999999999999 999888 9999999999999999998 67899999999998653
Q ss_pred --------------ccccccccCChHHHHHHHHHccCCCCCC---ccccCccchhhhhhccccccccccCCCceeeeecc
Q 025404 81 --------------CNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAIDEKRTCRGPKAVAMDCE 143 (253)
Q Consensus 81 --------------C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C~~~f~~~~~l~~h~~~~~~~r~~~~~~~~~~dcE 143 (253)
|+.|++.|.+...|..|+++|++++||. |++.|.+...|..|+..+.+. ..+.|+
T Consensus 94 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~--------~~~~C~ 165 (190)
T 2i13_A 94 RAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE--------KPYKCP 165 (190)
T ss_dssp HHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCC--------CCEECT
T ss_pred HHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCC--------CCeECC
Confidence 9999999999999999999999999997 999999999999999776542 357899
Q ss_pred cccCCCCCcccc
Q 025404 144 MVGGGSNGTLDL 155 (253)
Q Consensus 144 ~~g~~~~~~~~l 155 (253)
.||..+.....+
T Consensus 166 ~C~~~f~~~~~L 177 (190)
T 2i13_A 166 ECGKSFSRRDAL 177 (190)
T ss_dssp TTCCEESSHHHH
T ss_pred CCCCccCCHHHH
Confidence 999887777666
No 2
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=99.87 E-value=3.6e-23 Score=161.68 Aligned_cols=118 Identities=25% Similarity=0.432 Sum_probs=106.6
Q ss_pred CCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCccccccc---
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRG--- 80 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~--- 80 (253)
.++++|.|+.|++.|.....|..|+++ |.++++ .|+.|++.|.+...|..|+ +++|.|+.|++.|....
T Consensus 45 ~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~ 122 (190)
T 2i13_A 45 TGEKPYKCPECGKSFSDKKDLTRHQRT--HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122 (190)
T ss_dssp ---CCEECTTTCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHH
T ss_pred CCCCCccCCCcCchhCCHHHHHHHHHh--cCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHH
Confidence 467899999999999999999999999 888888 9999999999999999998 67999999999998753
Q ss_pred -------------ccccccccCChHHHHHHHHHccCCCCCC---ccccCccchhhhhhccccccc
Q 025404 81 -------------CNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAIDEK 129 (253)
Q Consensus 81 -------------C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C~~~f~~~~~l~~h~~~~~~~ 129 (253)
|+.|++.|.+.+.|..|+++|++++||. |++.|.+...|..|+..+.+.
T Consensus 123 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~ 187 (190)
T 2i13_A 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGK 187 (190)
T ss_dssp HHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC---
T ss_pred HHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCC
Confidence 9999999999999999999999999997 999999999999999877653
No 3
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=99.87 E-value=1.8e-22 Score=157.64 Aligned_cols=134 Identities=19% Similarity=0.280 Sum_probs=116.8
Q ss_pred CCCCCcccc--cccccccCCHHHHHHhhhhcCCCCCcc-cc--ccccccccCHHHHhhhh-----CCCCCCC--cCCccc
Q 025404 9 KRSTARHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KC--AVCQKLSKSFESLREHL-----TGPLSKA--HCSGIF 76 (253)
Q Consensus 9 ~~~~k~~~C--~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C--~~C~~~f~~~~~l~~H~-----~~~~~C~--~C~~~f 76 (253)
+.++++|.| +.|++.|.....|..|+++ |+++++ .| +.|++.|.+...|..|+ +++|.|. .|++.|
T Consensus 7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f 84 (190)
T 1tf6_A 7 PVVYKRYICSFADCGAAYNKNWKLQAHLCK--HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRF 84 (190)
T ss_dssp ---CCCCBCSSTTTCCBCSSHHHHHHHHHH--HHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEE
T ss_pred cCCCcceeCCCCCCcchhCCHHHHHHHHHh--cCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCcc
Confidence 668999999 7899999999999999999 999988 99 88999999999999998 5789999 899999
Q ss_pred cccc------------------c--cccccccCChHHHHHHHHHccCCCCCC-----ccccCccchhhhhhccccccccc
Q 025404 77 SDRG------------------C--NLCMNIFDSPSSLIKHKEACSLSAPVP-----FEKTLSNAESQKKISGAIDEKRT 131 (253)
Q Consensus 77 ~~~~------------------C--~~C~k~f~~~~~l~~H~~~h~~~~~~~-----C~~~f~~~~~l~~h~~~~~~~r~ 131 (253)
.... | +.|++.|.+.+.|..|+++|++++||. |++.|.+.+.|..|+..+.+
T Consensus 85 ~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--- 161 (190)
T 1tf6_A 85 TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--- 161 (190)
T ss_dssp SCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---
T ss_pred CCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---
Confidence 7542 8 899999999999999999999999995 78899999999999976653
Q ss_pred cCCCceeeeeccc---ccCCCCCcccc
Q 025404 132 CRGPKAVAMDCEM---VGGGSNGTLDL 155 (253)
Q Consensus 132 ~~~~~~~~~dcE~---~g~~~~~~~~l 155 (253)
+.|+. |+..+.....+
T Consensus 162 --------~~C~~~~~C~~~f~~~~~l 180 (190)
T 1tf6_A 162 --------YPCKKDDSCSFVGKTWTLY 180 (190)
T ss_dssp --------CCCCSTTTCCCCCSCHHHH
T ss_pred --------CcCCCCCcCCCccccHHHH
Confidence 56777 88776666555
No 4
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.82 E-value=9.9e-21 Score=137.30 Aligned_cols=111 Identities=20% Similarity=0.276 Sum_probs=93.8
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhhCCCCCCCcCCcccccccccccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNI 87 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~k~ 87 (253)
++++++|+|+.|++.|.....|..|+++ |.++++ .|+.|++.|.+...|..|+..... ..-.+ ...|+.|++.
T Consensus 2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~-~~~~~---~~~C~~C~~~ 75 (124)
T 2dlq_A 2 SSGSSGVECPTCHKKFLSKYYLKVHNRK--HTGEKPFECPKCGKCYFRKENLLEHEARNCM-NRSEQ---VFTCSVCQET 75 (124)
T ss_dssp CCCCSSCCCTTTCCCCSSHHHHHHHHHH--HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCC-CSCCC---CEECSSSCCE
T ss_pred CCCCCCCCCCCCCCcCCCHHHHHHHHHh--CCCCCCeECCCCCchhcCHHHHHHHHhhhhc-CCCCC---CeECCCCCCc
Confidence 4688999999999999999999999999 999888 999999999999999999721000 00001 1137788899
Q ss_pred cCChHHHHHHHHHccCCCCCC---ccccCccchhhhhhccc
Q 025404 88 FDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGA 125 (253)
Q Consensus 88 f~~~~~l~~H~~~h~~~~~~~---C~~~f~~~~~l~~h~~~ 125 (253)
|.+...|..|+++|++++||. |++.|.+...|..|+..
T Consensus 76 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~ 116 (124)
T 2dlq_A 76 FRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK 116 (124)
T ss_dssp ESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHH
Confidence 999999999999999999997 99999999999999863
No 5
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=99.82 E-value=5e-21 Score=140.86 Aligned_cols=86 Identities=20% Similarity=0.314 Sum_probs=78.5
Q ss_pred CCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccc
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNL 83 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~ 83 (253)
.|++||.|+.|++.|.....|..|+++ |+++++ +|+.|++.|.+.+.|..|+ ++||. |+.
T Consensus 18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~------------C~~ 83 (133)
T 2lt7_A 18 DGRVYYICIVCKRSYVCLTSLRRHFNI--HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQ------------CLA 83 (133)
T ss_dssp TTEEEEEETTTCCEESCHHHHHHHHHH--HHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEE------------ESS
T ss_pred CCCcCeECCCCCCCcCCHHHHHHHHHH--cCCCCCeeCCccCeecccccchhhhccccCCCcccc------------CCC
Confidence 589999999999999999999999999 999999 9999999999999999998 45665 667
Q ss_pred cccccCChHHHHHHHHHccCCCCCCc
Q 025404 84 CMNIFDSPSSLIKHKEACSLSAPVPF 109 (253)
Q Consensus 84 C~k~f~~~~~l~~H~~~h~~~~~~~C 109 (253)
||+.|.+.+.|..|+++|++++|+.|
T Consensus 84 C~k~F~~~~~L~~H~~~hh~~~p~~~ 109 (133)
T 2lt7_A 84 CGKSFINYQFMSSHIKSVHSQDPSGD 109 (133)
T ss_dssp SCCEESSHHHHHHHHHHHTCCCTTSS
T ss_pred CCCCcCCHHHHHHHhHHhcCCCCCCC
Confidence 88899999999999999999887653
No 6
>1wlj_A Interferon stimulated gene 20KDA; exoribonuclease, hydrolase; HET: U5P; 1.90A {Homo sapiens} SCOP: c.55.3.5
Probab=99.81 E-value=3.4e-20 Score=144.66 Aligned_cols=102 Identities=36% Similarity=0.673 Sum_probs=89.7
Q ss_pred CCceeeeecccccCCCCCcccccceeeeecCCCCeEEeeeccCCCCcccceeeeccCCHHhhcCCCCHHHHHHHHHHHHh
Q 025404 134 GPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILN 213 (253)
Q Consensus 134 ~~~~~~~dcE~~g~~~~~~~~ll~~v~iv~~~~~~~~~~~v~P~~~i~~~~~~~~Git~~~l~~~~~~~~v~~~l~~~~~ 213 (253)
..+++++|+||+|.......++ +.+.+++.+|+++++.+|+|..+|++++++++|||+++|+++|+|.+|+.+|.+++
T Consensus 4 ~~~~vviD~ETTGl~~~~~~~i-iei~~v~~~g~~i~~~lV~P~~~i~~~~~~i~GIt~~~l~~a~~~~~v~~~~~~~l- 81 (189)
T 1wlj_A 4 SREVVAMDCEMVGLGPHRESGL-ARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLL- 81 (189)
T ss_dssp --CEEEEEEEEEEETTTTEEEE-EEEEEECTTCCEEEEEEEECSSCEEECCHHHHCCCHHHHTTCEEHHHHHHHHHHHH-
T ss_pred CCeEEEEEeECcCcCCCCCceE-EEEEEEeCCCCEEEeeEecCCCCCCccccCCCCCCHHHHcCCCCHHHHHHHHHHHH-
Confidence 3468999999999765543334 66777778899999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCeEEEeechhhhhhhhcCCCCCC
Q 025404 214 NGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDH 250 (253)
Q Consensus 214 ~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~~~~~~~ 250 (253)
++.+|||||+.||++||+..+|+.
T Consensus 82 -------------~~~~lV~hn~~fD~~~L~~~~~~~ 105 (189)
T 1wlj_A 82 -------------KGKLVVGHDLKHDFQALKEDMSGY 105 (189)
T ss_dssp -------------TTSEEEESSHHHHHHHTTCCCTTC
T ss_pred -------------CCCEEEECCcHHHHHHHHHhCCCC
Confidence 788999999999999999998864
No 7
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=99.80 E-value=2.8e-20 Score=134.03 Aligned_cols=102 Identities=20% Similarity=0.455 Sum_probs=91.9
Q ss_pred CCCCcccccc--cccccCCHHHHHHhhhhcCCCCCcc-ccc--cccccccCHHHHhhhh-----CCCCCCCcCCcccccc
Q 025404 10 RSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDR 79 (253)
Q Consensus 10 ~~~k~~~C~~--C~k~f~~~~~l~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~ 79 (253)
++++||.|+. |++.|.....|..|+++ |.++++ .|+ .|++.|.+...|..|+ +++|.
T Consensus 2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~----------- 68 (119)
T 2jp9_A 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRK--HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQ----------- 68 (119)
T ss_dssp CSSCCBCCCSTTSCCCBSCHHHHHHHHHH--HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEE-----------
T ss_pred CCCeeeeCCCCCCcchhCCHHHHHHHHHh--hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCcc-----------
Confidence 5789999986 99999999999999999 998888 999 7999999999999998 45665
Q ss_pred cccccccccCChHHHHHHHHHccCCCCCC-----ccccCccchhhhhhccc
Q 025404 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVP-----FEKTLSNAESQKKISGA 125 (253)
Q Consensus 80 ~C~~C~k~f~~~~~l~~H~~~h~~~~~~~-----C~~~f~~~~~l~~h~~~ 125 (253)
|+.|++.|.+...|..|+++|++++||. |++.|.+...|..|++.
T Consensus 69 -C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~ 118 (119)
T 2jp9_A 69 -CKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118 (119)
T ss_dssp -CTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred -CCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence 5668888999999999999999999885 68999999999999854
No 8
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=99.80 E-value=6.7e-20 Score=143.01 Aligned_cols=115 Identities=18% Similarity=0.277 Sum_probs=104.0
Q ss_pred CCCcccc--cccccccCCHHHHHHhhhhcCCCCCcc-ccc--cccccccCHHHHhhhh-------CCCCCC--CcCCccc
Q 025404 11 STARHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-------TGPLSK--AHCSGIF 76 (253)
Q Consensus 11 ~~k~~~C--~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-------~~~~~C--~~C~~~f 76 (253)
+++||.| +.|++.|.....|..|+++ |.++++ .|+ .|++.|.+...|..|+ .++|.| +.|++.|
T Consensus 39 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f 116 (190)
T 1tf6_A 39 GEKPFPCKEEGCEKGFTSLHHLTRHSLT--HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAF 116 (190)
T ss_dssp CCCSSCCSSTTCCCCCSSHHHHHHHHTT--TTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEEC
T ss_pred CCCCccCCCCCCChhhCCHHHHHHHHHH--ccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCcccc
Confidence 6789999 8899999999999999999 999998 999 8999999999999997 357999 8999999
Q ss_pred cccc----------------ccc--cccccCChHHHHHHHHHccCCCCCC---ccccCccchhhhhhccccc
Q 025404 77 SDRG----------------CNL--CMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAID 127 (253)
Q Consensus 77 ~~~~----------------C~~--C~k~f~~~~~l~~H~~~h~~~~~~~---C~~~f~~~~~l~~h~~~~~ 127 (253)
.... |+. |++.|.+.+.|..|+++|++-+... |++.|.....|..|+..++
T Consensus 117 ~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~~C~~~~~C~~~f~~~~~l~~H~~~h~ 188 (190)
T 1tf6_A 117 KKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188 (190)
T ss_dssp SSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCSCCCCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCCCcCCCCCcCCCccccHHHHHHHHHhhc
Confidence 8753 987 9999999999999999999944444 9999999999999997664
No 9
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.79 E-value=1e-19 Score=137.24 Aligned_cols=124 Identities=18% Similarity=0.273 Sum_probs=91.1
Q ss_pred CCcccccccccccCCHHHHHHhhh---hcCCCCCcc-cccc-----ccccccCHHHHhhhh-----CCCCCCCcCCcccc
Q 025404 12 TARHKCVACYKQFKRKDHLIEHMK---ISYHSVHQP-KCAV-----CQKLSKSFESLREHL-----TGPLSKAHCSGIFS 77 (253)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~---~~~H~~~~~-~C~~-----C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~ 77 (253)
|.+|+|+.|++.|.+...|..|++ + |.++++ .|+. |++.|.+...|..|+ +++|.|+.
T Consensus 1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~--h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~------ 72 (155)
T 2gli_A 1 ETDCRWDGCSQEFDSQEQLVHHINSEHI--HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTF------ 72 (155)
T ss_dssp CCBCCBTTCCCBCSCHHHHHHHHHHHTS--SSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCS------
T ss_pred CCcCCcCCCccccCCHHHHHHHHHhhcc--CCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCC------
Confidence 568999999999999999999998 5 888887 7764 459999999999998 57888742
Q ss_pred cccccccccccCChHHHHHHHHHccCCCCCC-----ccccCccchhhhhhc-cccccccccCCCceeeeeccc--ccCCC
Q 025404 78 DRGCNLCMNIFDSPSSLIKHKEACSLSAPVP-----FEKTLSNAESQKKIS-GAIDEKRTCRGPKAVAMDCEM--VGGGS 149 (253)
Q Consensus 78 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~-----C~~~f~~~~~l~~h~-~~~~~~r~~~~~~~~~~dcE~--~g~~~ 149 (253)
+.|++.|.+...|..|+++|++++||. |++.|.+.+.|..|+ ..+.+. ..+.|+. ||..+
T Consensus 73 ----~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~--------~~~~C~~~~C~~~f 140 (155)
T 2gli_A 73 ----EGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE--------KPYVCKLPGCTKRY 140 (155)
T ss_dssp ----TTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSC--------CCEECCSTTTCCEE
T ss_pred ----CCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCC--------CCeeCCCCCCcccc
Confidence 236667777777777777777777763 666777777777776 444321 3456666 77665
Q ss_pred CCcccc
Q 025404 150 NGTLDL 155 (253)
Q Consensus 150 ~~~~~l 155 (253)
.....+
T Consensus 141 ~~~~~L 146 (155)
T 2gli_A 141 TDPSSL 146 (155)
T ss_dssp SSHHHH
T ss_pred CCHHHH
Confidence 555444
No 10
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=99.79 E-value=1.3e-19 Score=131.52 Aligned_cols=105 Identities=19% Similarity=0.278 Sum_probs=89.8
Q ss_pred CCCccccc--ccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCccccccccc
Q 025404 11 STARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (253)
Q Consensus 11 ~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~ 82 (253)
++++|.|+ .|++.|.....|..|+++ | ++++ .|+.|++.|.+...|..|+ +++|.|. ++
T Consensus 2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~----------~~ 68 (124)
T 1ubd_C 2 EPRTIACPHKGCTKMFRDNSAMRKHLHT--H-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT----------FE 68 (124)
T ss_dssp ---CEECCSTTCCCEESSHHHHHHHHGG--G-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECC----------ST
T ss_pred CCCcccCCCCCCcCccCCHHHHHHHHHH--c-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCC----------CC
Confidence 46899999 899999999999999999 8 6777 9999999999999999998 4556552 23
Q ss_pred ccccccCChHHHHHHHHHccCCCCCC-----ccccCccchhhhhhcccccc
Q 025404 83 LCMNIFDSPSSLIKHKEACSLSAPVP-----FEKTLSNAESQKKISGAIDE 128 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~h~~~~~~~-----C~~~f~~~~~l~~h~~~~~~ 128 (253)
.|++.|.+...|..|+++|++++||. |++.|...+.|..|+..+.+
T Consensus 69 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~ 119 (124)
T 1ubd_C 69 GCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119 (124)
T ss_dssp TCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred CCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence 48899999999999999999999885 78899999999999977654
No 11
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=99.77 E-value=1.5e-18 Score=122.37 Aligned_cols=91 Identities=24% Similarity=0.521 Sum_probs=81.0
Q ss_pred CCCCCCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCccccc
Q 025404 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSD 78 (253)
Q Consensus 5 ~~~~~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~ 78 (253)
...++.++++|.|..|++.|.....|..|+++ |.++++ .|..|++.|.+...|..|+ +++|.
T Consensus 8 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~---------- 75 (106)
T 2ee8_A 8 GRLPSKTKKEFICKFCGRHFTKSYNLLIHERT--HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK---------- 75 (106)
T ss_dssp CCCCCCCCCCCBCSSSCCBCSSHHHHHHHHHH--HCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTS----------
T ss_pred CcCCcCCCcCeECCCCCCccCCHHHHHHHHHH--cCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeE----------
Confidence 34466789999999999999999999999999 999888 9999999999999999998 44555
Q ss_pred ccccccccccCChHHHHHHHHHccCCCCCCc
Q 025404 79 RGCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (253)
Q Consensus 79 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~C 109 (253)
|..|++.|.+...|..|+++|++++||.+
T Consensus 76 --C~~C~~~f~~~~~L~~H~~~H~~~~~~~~ 104 (106)
T 2ee8_A 76 --CQECGKGFCQSRTLAVHKTLHMQTSSPTA 104 (106)
T ss_dssp --CSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred --CCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence 56688889999999999999999999863
No 12
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.75 E-value=9.9e-19 Score=131.84 Aligned_cols=109 Identities=19% Similarity=0.294 Sum_probs=91.6
Q ss_pred CCCCcccccccccccCCHHHHHHhhhhcCCCCCc---------cccccccccccCHHHHhhhh-----CCCCCCCcCCcc
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ---------PKCAVCQKLSKSFESLREHL-----TGPLSKAHCSGI 75 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~---------~~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~ 75 (253)
..+++|.|..|++.|.+...|..|++.+ |.+.. ..|..|++.|.+...|..|+ +++|.|..
T Consensus 21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~-H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~---- 95 (155)
T 2rpc_A 21 EAQLSRPKKSCDRTFSTMHELVTHVTME-HVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPF---- 95 (155)
T ss_dssp TTCCSSSCCCCCCCBSSHHHHHHHHHTT-TSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSC----
T ss_pred hhhcccccccCCcccCCHHHHHHHHHhh-cCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCc----
Confidence 3567899999999999999999999874 66654 26999999999999999998 56676532
Q ss_pred cccccccccccccCChHHHHHHHHHccCCCCCC-----ccccCccchhhhhhccccccc
Q 025404 76 FSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP-----FEKTLSNAESQKKISGAIDEK 129 (253)
Q Consensus 76 f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~-----C~~~f~~~~~l~~h~~~~~~~ 129 (253)
+.|++.|.+...|..|+++|++++||. |++.|.....|..|++.+.+.
T Consensus 96 ------~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~ 148 (155)
T 2rpc_A 96 ------PGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD 148 (155)
T ss_dssp ------TTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred ------CCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence 228888899999999999999999885 678999999999999777653
No 13
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.74 E-value=2.9e-18 Score=118.66 Aligned_cols=86 Identities=33% Similarity=0.571 Sum_probs=77.2
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCccccccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~ 82 (253)
+.+++||+|+.|++.|.....|..|++. |.++++ .|..|++.|.+...|..|+ +++|. |+
T Consensus 3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~ 68 (96)
T 2dmd_A 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRC--HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK------------CQ 68 (96)
T ss_dssp CCCCCCCCBTTTTBCCCCHHHHHHHGGG--CCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEE------------CS
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHHHh--cCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCcc------------CC
Confidence 5688999999999999999999999999 999888 9999999999999999998 44554 66
Q ss_pred ccccccCChHHHHHHHHHccCCCCCC
Q 025404 83 LCMNIFDSPSSLIKHKEACSLSAPVP 108 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~h~~~~~~~ 108 (253)
.|++.|.+.+.|..|+++|+++++..
T Consensus 69 ~C~~~f~~~~~l~~H~~~h~~~~~p~ 94 (96)
T 2dmd_A 69 ICPYASRNSSQLTVHLRSHTGDSGPS 94 (96)
T ss_dssp SSSCEESSHHHHHHHHTTCCSCCCCC
T ss_pred CCCCccCCHHHHHHHHHHhcCCCCCC
Confidence 78889999999999999999987643
No 14
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=99.71 E-value=5.5e-18 Score=115.78 Aligned_cols=82 Identities=21% Similarity=0.543 Sum_probs=70.6
Q ss_pred CCCccccc--ccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCccccccccc
Q 025404 11 STARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (253)
Q Consensus 11 ~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~ 82 (253)
|++||.|+ .|++.|.....|..|+++ |.++++ .|..|++.|.+...|..|+ +++|. |+
T Consensus 1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~ 66 (90)
T 1a1h_A 1 MERPYACPVESCDRRFSQSGSLTRHIRI--HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA------------CD 66 (90)
T ss_dssp --CCEECCSSSCCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE------------CT
T ss_pred CCCceECCCCCCCCccCCHHHHHHHHHH--hCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCcc------------CC
Confidence 57899998 699999999999999999 998888 9999999999999999998 45665 56
Q ss_pred ccccccCChHHHHHHHHHccCCCC
Q 025404 83 LCMNIFDSPSSLIKHKEACSLSAP 106 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~h~~~~~ 106 (253)
.|++.|.+.+.|..|+++|+++++
T Consensus 67 ~C~~~f~~~~~l~~H~~~H~~~k~ 90 (90)
T 1a1h_A 67 ICGRKFARSDERKRHTKIHLRQKD 90 (90)
T ss_dssp TTCCEESSHHHHHHHHGGGGC---
T ss_pred CCCchhCCHHHHHHHHHHhcccCC
Confidence 688889999999999999998763
No 15
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.71 E-value=2e-17 Score=116.91 Aligned_cols=92 Identities=21% Similarity=0.296 Sum_probs=79.5
Q ss_pred CCCCCCCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh----CCCCCCCcCCccccc
Q 025404 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL----TGPLSKAHCSGIFSD 78 (253)
Q Consensus 4 ~~~~~~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~----~~~~~C~~C~~~f~~ 78 (253)
+.....++++||+|+.|++.|.....|..|+++ |. ++ .|..|++.|.....|..|+ +++|.
T Consensus 6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--H~--~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~---------- 71 (107)
T 1wjp_A 6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERL--CR--NAAVCPYCSLRFFSPELKQEHESKCEYKKLT---------- 71 (107)
T ss_dssp CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHH--HH--HSBCCTTTCCCBSSHHHHHHHHHHCSTGGGE----------
T ss_pred ccCcccCCCcCeECCCCCCccCCHHHHHHHHHH--CC--CCccCCCCCCccCCHHHHHHHHHcCCCCCcc----------
Confidence 344446689999999999999999999999999 73 56 9999999999999999998 33443
Q ss_pred ccccccccccCChHHHHHHHH-HccCCCCCCccc
Q 025404 79 RGCNLCMNIFDSPSSLIKHKE-ACSLSAPVPFEK 111 (253)
Q Consensus 79 ~~C~~C~k~f~~~~~l~~H~~-~h~~~~~~~C~~ 111 (253)
|+.|++.|.+...|..|++ +|.+++||+|..
T Consensus 72 --C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~ 103 (107)
T 1wjp_A 72 --CLECMRTFKSSFSIWRHQVEVHNQNNMAPTSG 103 (107)
T ss_dssp --EGGGTEECSSHHHHHHHHHHTSCCCCCCCCCC
T ss_pred --CccccchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence 7789999999999999997 999999998653
No 16
>2gui_A DNA polymerase III epsilon subunit; DNA polymerase proofreading domain, transferase; HET: DNA U5P; 1.60A {Escherichia coli} SCOP: c.55.3.5 PDB: 1j54_A* 1j53_A* 2ido_A* 2xy8_A*
Probab=99.69 E-value=1.4e-17 Score=130.33 Aligned_cols=95 Identities=21% Similarity=0.422 Sum_probs=82.0
Q ss_pred CceeeeecccccCCC-------CCcccccceeeeecCCCCe---EEeeeccCCCCcccceeeeccCCHHhhcCCCCHHHH
Q 025404 135 PKAVAMDCEMVGGGS-------NGTLDLCARVCLVDEDENV---IFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEV 204 (253)
Q Consensus 135 ~~~~~~dcE~~g~~~-------~~~~~ll~~v~iv~~~~~~---~~~~~v~P~~~i~~~~~~~~Git~~~l~~~~~~~~v 204 (253)
.+++++|+||+|... +.++++ +.+.+. ++.+ .++.+|+|..+++++.+++||||+++|.+++++.+|
T Consensus 9 ~~~vviD~ETTGl~~~~~~~~~~~Iiei-g~v~~~--~~~~~~~~f~~lv~P~~~i~~~~~~i~GIt~~~l~~~~~~~~v 85 (194)
T 2gui_A 9 TRQIVLDTETTGMNQIGAHYEGHKIIEI-GAVEVV--NRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEV 85 (194)
T ss_dssp CEEEEEEEEESCCCSSSSTTTTCCEEEE-EEEEEE--TTEECSCCEEEECCCSSCCCHHHHHHHCCCHHHHTTSCCHHHH
T ss_pred CCEEEEEeeCCCCCCcccCCCCCEEEEE-EEEEEE--CCeEeccEEEEEECcCCcCCHHHHHhhCcCHHHHhCCCCHHHH
Confidence 468999999999765 455565 666663 4544 489999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcccccCCCCeEEEeechhhhhhhhcCC
Q 025404 205 KDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMN 246 (253)
Q Consensus 205 ~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~~~ 246 (253)
+.++.+++ ++.+|||||+.||+.||+..
T Consensus 86 ~~~~~~~l--------------~~~~lv~hn~~fD~~~L~~~ 113 (194)
T 2gui_A 86 ADEFMDYI--------------RGAELVIHNAAFDIGFMDYE 113 (194)
T ss_dssp HHHHHHHH--------------TTSEEEETTHHHHHHHHHHH
T ss_pred HHHHHHHH--------------CCCeEEEEchHHhHHHHHHH
Confidence 99999999 78899999999999999853
No 17
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.68 E-value=5.9e-17 Score=111.78 Aligned_cols=82 Identities=28% Similarity=0.453 Sum_probs=73.1
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----C--CCCCCCcCCccccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----T--GPLSKAHCSGIFSDRG 80 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~--~~~~C~~C~~~f~~~~ 80 (253)
++++++|.|+.|++.|.....|..|+++ |.++++ .|+.|++.|.+...|..|+ + ++|.
T Consensus 2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~------------ 67 (95)
T 2yt9_A 2 SSGSSGVACEICGKIFRDVYHLNRHKLS--HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI------------ 67 (95)
T ss_dssp CCCCSCEECSSSCCEESSSHHHHHHHHH--SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBC------------
T ss_pred CCCCCCeECCCCCCccCChHHHHHHHHh--cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceE------------
Confidence 5789999999999999999999999999 999998 9999999999999999998 2 4555
Q ss_pred ccccccccCChHHHHHHHH-HccCC
Q 025404 81 CNLCMNIFDSPSSLIKHKE-ACSLS 104 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~-~h~~~ 104 (253)
|+.|++.|.+...|..|++ .|.++
T Consensus 68 C~~C~~~f~~~~~L~~H~~~~H~~~ 92 (95)
T 2yt9_A 68 CQSCGKGFSRPDHLNGHIKQVHSGP 92 (95)
T ss_dssp CSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred CCCccchhCCHHHHHHHHHHhcCCC
Confidence 5667888999999999996 78765
No 18
>2p1j_A POLIII, DNA polymerase III POLC-type; structural genomics, exonuclease, PSI-2, protein structure initiative; HET: DNA; 2.50A {Thermotoga maritima MSB8}
Probab=99.67 E-value=4.4e-17 Score=126.67 Aligned_cols=95 Identities=24% Similarity=0.446 Sum_probs=81.3
Q ss_pred CCceeeeecccccCCC--CCcccccceeeeecCCCCe--EEeeeccCCCCcccceeeeccCCHHhhcCCCCHHHHHHHHH
Q 025404 134 GPKAVAMDCEMVGGGS--NGTLDLCARVCLVDEDENV--IFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKIL 209 (253)
Q Consensus 134 ~~~~~~~dcE~~g~~~--~~~~~ll~~v~iv~~~~~~--~~~~~v~P~~~i~~~~~~~~Git~~~l~~~~~~~~v~~~l~ 209 (253)
..+++++|+||+|... +.++++ +.+.+. +|++ .++.+|+|..+++++.++++|||++++++++++.+|+.++.
T Consensus 11 ~~~~v~iD~ETTGl~~~~~~IieI-g~v~~~--~g~i~~~f~~lv~P~~~i~~~~~~i~GIt~~~l~~~~~~~~v~~~~~ 87 (186)
T 2p1j_A 11 DATFVVLDFETTGLDPQVDEIIEI-GAVKIQ--GGQIVDEYHTLIKPSREISRKSSEITGITQEMLENKRSIEEVLPEFL 87 (186)
T ss_dssp --CEEEEEEEESCSCTTTCCEEEE-EEEEEE--TTEEEEEEEEECBCSSCCCHHHHHHHCCCHHHHTTCCBHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCCCCeEEEE-EEEEEE--CCEEEEEEEEEECcCCCCCHHHhhhcCCCHHHHhcCCCHHHHHHHHH
Confidence 4568999999999753 455565 666653 5666 48999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcccccCCCCeEEEeechhhhhhhhcC
Q 025404 210 EILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM 245 (253)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~~ 245 (253)
+++ ++.+|||||+.||+.||+.
T Consensus 88 ~~l--------------~~~~lv~hn~~fD~~~L~~ 109 (186)
T 2p1j_A 88 GFL--------------EDSIIVAHNANFDYRFLRL 109 (186)
T ss_dssp HHS--------------SSCEEEETTHHHHHHHHHH
T ss_pred HHH--------------CCCEEEEECcHHHHHHHHH
Confidence 999 7789999999999999974
No 19
>2igi_A Oligoribonuclease; RNAse, exoribonuclease, exonuclease, hydrolase, mRNA decay; 1.70A {Escherichia coli} SCOP: c.55.3.5 PDB: 1yta_A 1j9a_A
Probab=99.67 E-value=2.1e-17 Score=127.88 Aligned_cols=104 Identities=19% Similarity=0.214 Sum_probs=79.9
Q ss_pred CceeeeecccccCCC--CCcccccceeeeecCCCCeE---EeeeccCCCCcccc----e---eeeccCCHHhhcCCCCHH
Q 025404 135 PKAVAMDCEMVGGGS--NGTLDLCARVCLVDEDENVI---FHTYVQPQLPVTNY----R---YEVTGLTEEDIKNAMPLK 202 (253)
Q Consensus 135 ~~~~~~dcE~~g~~~--~~~~~ll~~v~iv~~~~~~~---~~~~v~P~~~i~~~----~---~~~~Git~~~l~~~~~~~ 202 (253)
.+++++|+||+|... +.++++ +.+ +++.++.++ ++.+|+|..+++++ . ..++|||++++++++++.
T Consensus 5 ~~~v~iD~ETTGl~~~~~~IieI-g~v-~~~~~~~~~~~~~~~lv~P~~~i~~~i~~~~~~~~~itGIt~~~l~~~~~~~ 82 (180)
T 2igi_A 5 NNLIWIDLEMTGLDPERDRIIEI-ATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDR 82 (180)
T ss_dssp GCEEEEEEEESSSCTTTCCEEEE-EEE-EECTTCCEEEEEEEEECCCCHHHHTTCCHHHHHHHHHTTHHHHHHHCCCCHH
T ss_pred CcEEEEEeeCCCCCCCCCceEEE-EEE-EEcCCCcEecCCcceEECCCHHHhhcCCHHHHHHHHHcCCCHHHHhcCCCHH
Confidence 458999999999764 456666 666 556566663 89999999877654 3 556999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcccccCCCCeEEEeechhhhhhhhcCCCC
Q 025404 203 EVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYP 248 (253)
Q Consensus 203 ~v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~~~~~ 248 (253)
+|+.++.+++.... + +...+|||||+.||+.||+...+
T Consensus 83 ~v~~~~~~~l~~~~------~--~~~~~lv~hn~~fD~~fL~~~~~ 120 (180)
T 2igi_A 83 EAELATLEFLKQWV------P--AGKSPICGNSIGQDRRFLFKYMP 120 (180)
T ss_dssp HHHHHHHHHHTTTS------C--TTTSCEEESSHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHhC------C--CCCceEEecCHHHHHHHHHHHHH
Confidence 99999999992100 0 01369999999999999986543
No 20
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=99.67 E-value=1.8e-17 Score=121.81 Aligned_cols=102 Identities=15% Similarity=0.164 Sum_probs=84.3
Q ss_pred HhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCC
Q 025404 32 EHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 32 ~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
.|.++ |.|+++ +|++|++.|.+.++|..|+ ++||. |+.|+++|.+.+.|..|+++|++++
T Consensus 12 h~~~~--h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~------------C~~C~k~F~~~~~L~~H~~~H~~~k 77 (133)
T 2lt7_A 12 HYELI--VDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYP------------CRYCEKVFPLAEYRTKHEIHHTGER 77 (133)
T ss_dssp EEEEE--ETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEE------------CSSSSCEESSHHHHHHHHHHHHTCC
T ss_pred hceee--cCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCee------------CCccCeecccccchhhhccccCCCc
Confidence 35566 899999 9999999999999999998 56665 5667888999999999999999999
Q ss_pred CCC---ccccCccchhhhhhccccccccccCCCceeeeecccccCCC
Q 025404 106 PVP---FEKTLSNAESQKKISGAIDEKRTCRGPKAVAMDCEMVGGGS 149 (253)
Q Consensus 106 ~~~---C~~~f~~~~~l~~h~~~~~~~r~~~~~~~~~~dcE~~g~~~ 149 (253)
||. |++.|.+.+.|..|+..+++..... ....+.|+.|+..+
T Consensus 78 ~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~--~~k~~~C~~C~k~~ 122 (133)
T 2lt7_A 78 RYQCLACGKSFINYQFMSSHIKSVHSQDPSG--DSKLYRLHPCRSLQ 122 (133)
T ss_dssp CEEESSSCCEESSHHHHHHHHHHHTCCCTTS--SSCCEEECCCCSSC
T ss_pred cccCCCCCCCcCCHHHHHHHhHHhcCCCCCC--CCCCeecCCCCchh
Confidence 997 9999999999999998776543222 23457788888643
No 21
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=99.66 E-value=4.5e-17 Score=109.10 Aligned_cols=76 Identities=32% Similarity=0.605 Sum_probs=68.7
Q ss_pred cccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccc
Q 025404 14 RHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNI 87 (253)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~ 87 (253)
||.|+.|++.|.....|..|+++ |.++++ .|..|++.|.+...|..|+ +++|. |+.|++.
T Consensus 1 ~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~ 66 (82)
T 2kmk_A 1 SFDCKICGKSFKRSSTLSTHLLI--HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK------------CQVCGKA 66 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH--HHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEE------------CTTTSCE
T ss_pred CccCCCCcccccCchhHHHHHHH--cCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCc------------CCCcchh
Confidence 68999999999999999999999 998888 9999999999999999998 45665 5668888
Q ss_pred cCChHHHHHHHHHccC
Q 025404 88 FDSPSSLIKHKEACSL 103 (253)
Q Consensus 88 f~~~~~l~~H~~~h~~ 103 (253)
|.+.+.|..|+++|+|
T Consensus 67 f~~~~~l~~H~~~H~g 82 (82)
T 2kmk_A 67 FSQSSNLITHSRKHTG 82 (82)
T ss_dssp ESSHHHHHHHHHHHC-
T ss_pred hCChHHHHHHHHhhCC
Confidence 9999999999999975
No 22
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=99.65 E-value=1.5e-16 Score=115.20 Aligned_cols=85 Identities=24% Similarity=0.391 Sum_probs=72.3
Q ss_pred CCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc--ccccccCHHHHhhhh-----CCCCCCCcCCccccccccc
Q 025404 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (253)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~ 82 (253)
++++|.|+.|++.|.....|..|+++ |.++++ .|.. |++.|.+...|..|+ +++|.|+ +.
T Consensus 31 ~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~----------~~ 98 (124)
T 1ubd_C 31 GPRVHVCAECGKAFVESSKLKRHQLV--HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP----------FD 98 (124)
T ss_dssp SCCCEECTTTCCEESSHHHHHHHGGG--TSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCC----------ST
T ss_pred CCCCeECCCCCchhCCHHHHHHHHHH--cCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECC----------CC
Confidence 67899999999999999999999999 999998 9975 999999999999998 5677763 24
Q ss_pred ccccccCChHHHHHHHHHccCCCCC
Q 025404 83 LCMNIFDSPSSLIKHKEACSLSAPV 107 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~h~~~~~~ 107 (253)
.|++.|.+.+.|..|+++|++++++
T Consensus 99 ~C~~~f~~~~~L~~H~~~H~~~k~~ 123 (124)
T 1ubd_C 99 GCNKKFAQSTNLKSHILTHAKAKNN 123 (124)
T ss_dssp TCCCCCSSTTTTHHHHHHHC-----
T ss_pred CCCCccCCHHHHHHHHHHHcccccC
Confidence 5888999999999999999999875
No 23
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.63 E-value=3.5e-16 Score=117.63 Aligned_cols=107 Identities=26% Similarity=0.426 Sum_probs=90.2
Q ss_pred CCCCCcccccc-----cccccCCHHHHHHhhhhcCCCCCcc-cccc--ccccccCHHHHhhhh-----CCCCCCCcCCcc
Q 025404 9 KRSTARHKCVA-----CYKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAHCSGI 75 (253)
Q Consensus 9 ~~~~k~~~C~~-----C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~C~~~ 75 (253)
..+++||.|+. |++.|.....|..|+++ |+++++ .|.. |++.|.+...|..|+ +++|.|+.+
T Consensus 29 h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~--- 103 (155)
T 2gli_A 29 HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR--HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHE--- 103 (155)
T ss_dssp SSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHH--HHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCST---
T ss_pred CCCCcceeCCCCCccchhhhhhhHHHHHHHHHh--cCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCC---
Confidence 34788999874 34999999999999999 999888 9985 999999999999998 456655321
Q ss_pred cccccccccccccCChHHHHHHH-HHccCCCCCC-----ccccCccchhhhhhccccc
Q 025404 76 FSDRGCNLCMNIFDSPSSLIKHK-EACSLSAPVP-----FEKTLSNAESQKKISGAID 127 (253)
Q Consensus 76 f~~~~C~~C~k~f~~~~~l~~H~-~~h~~~~~~~-----C~~~f~~~~~l~~h~~~~~ 127 (253)
.|++.|.+.+.|..|+ ++|++++||. |++.|.+.+.|..|+..++
T Consensus 104 -------~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh 154 (155)
T 2gli_A 104 -------GCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154 (155)
T ss_dssp -------TCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred -------CCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence 1888899999999999 8999999984 7889999999999986554
No 24
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=99.62 E-value=1.2e-15 Score=106.06 Aligned_cols=86 Identities=23% Similarity=0.473 Sum_probs=74.2
Q ss_pred CCCCCCCCCCcccccc--cccccCCHHHHHHhhhhcCCCCCcc-ccc--cccccccCHHHHhhhh-----CCCCCCCcCC
Q 025404 4 EAELPKRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCS 73 (253)
Q Consensus 4 ~~~~~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~ 73 (253)
...++...+++|.|.. |++.|.....|..|++. |.++++ .|. .|++.|.+...|..|+ +++|.
T Consensus 5 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~----- 77 (100)
T 2ebt_A 5 SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRT--HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ----- 77 (100)
T ss_dssp CCCCCCCSCCCEECCSSSCCCEESCHHHHHHHHHH--HSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCB-----
T ss_pred CCCcccccCcceEcCCCCCCCcccCHHHHHHHHHH--hCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeE-----
Confidence 3444566789999986 99999999999999999 998888 996 6999999999999998 45665
Q ss_pred cccccccccccccccCChHHHHHHHHHccC
Q 025404 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSL 103 (253)
Q Consensus 74 ~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~ 103 (253)
|+.|++.|.+.+.|..|+++|++
T Consensus 78 -------C~~C~~~f~~~~~l~~H~~~H~~ 100 (100)
T 2ebt_A 78 -------CGVCNRSFSRSDHLALHMKRHQN 100 (100)
T ss_dssp -------CSSSCCBCSSHHHHHHHHHHHCC
T ss_pred -------CCCCcCccCCHHHHHHHHHHhCC
Confidence 56677888999999999999974
No 25
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.61 E-value=5.2e-16 Score=110.04 Aligned_cols=81 Identities=31% Similarity=0.550 Sum_probs=72.1
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCccccccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~ 82 (253)
.++++||.| .|++.|.....|..|++. |.++++ .|..|++.|.+...|..|+ +++|. |+
T Consensus 5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~ 69 (110)
T 2csh_A 5 SSGDKLYPC-QCGKSFTHKSQRDRHMSM--HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYE------------CN 69 (110)
T ss_dssp CCCCCCEEC-TTSCEESSHHHHHHHHHH--HSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEE------------CS
T ss_pred CCCCCCEec-cCCCccCCHHHHHHHHHH--cCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCee------------CC
Confidence 468999999 999999999999999999 998888 9999999999999999998 33444 67
Q ss_pred ccccccCChHHHHHHHHHccCC
Q 025404 83 LCMNIFDSPSSLIKHKEACSLS 104 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~h~~~ 104 (253)
.|++.|.+...|..|+++|+..
T Consensus 70 ~C~~~f~~~~~l~~H~~~~~~~ 91 (110)
T 2csh_A 70 ICAKRFMWRDSFHRHVTSCTKS 91 (110)
T ss_dssp SSCCEESCHHHHHHHHHHHHHH
T ss_pred CCcchhcCHHHHHHHHHHcccc
Confidence 7888999999999999998643
No 26
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=6.1e-16 Score=110.56 Aligned_cols=87 Identities=21% Similarity=0.214 Sum_probs=71.6
Q ss_pred CCCCcccccccccccCCHHHHHHhhhhcCCCCCcc--ccccccccc--cCHHHHhhhh-----CCCCCCCcCCccccccc
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP--KCAVCQKLS--KSFESLREHL-----TGPLSKAHCSGIFSDRG 80 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~--~C~~C~~~f--~~~~~l~~H~-----~~~~~C~~C~~~f~~~~ 80 (253)
++++||+|+.|++.|.....|..|++++.|.+.++ .|..|++.| .....|..|+ +++|.
T Consensus 15 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~------------ 82 (115)
T 2dmi_A 15 TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK------------ 82 (115)
T ss_dssp CCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB------------
T ss_pred CCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE------------
Confidence 57899999999999999999999998733445554 699999999 8999999998 44554
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~ 108 (253)
|+.|++.|.+.+.|..|+++|+.....+
T Consensus 83 C~~C~k~f~~~~~L~~H~~~hh~~~~~~ 110 (115)
T 2dmi_A 83 CMYCGHSFESLQDLSVHMIKTKHYQKVS 110 (115)
T ss_dssp CSSSCCBCSSHHHHHHHHHHTTTTTCSC
T ss_pred CCCCCCccCCHHHHHHHHHHhCCcccCC
Confidence 5668888999999999999988765544
No 27
>1w0h_A 3'-5' exonuclease ERI1; nuclease domain, hydrolase; HET: AMP; 1.59A {Homo sapiens} SCOP: c.55.3.5
Probab=99.59 E-value=7.9e-16 Score=121.33 Aligned_cols=104 Identities=17% Similarity=0.291 Sum_probs=81.7
Q ss_pred CCceeeeecccccCCC------CCcccccceeeeecCCCCeE--EeeeccCCC--CcccceeeeccCCHHhhcCCCCHHH
Q 025404 134 GPKAVAMDCEMVGGGS------NGTLDLCARVCLVDEDENVI--FHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKE 203 (253)
Q Consensus 134 ~~~~~~~dcE~~g~~~------~~~~~ll~~v~iv~~~~~~~--~~~~v~P~~--~i~~~~~~~~Git~~~l~~~~~~~~ 203 (253)
...++++|+||+|... +.++++ +.+.+-..+|++. ++.+|+|.. +++++.+++||||+++|+++++|.+
T Consensus 9 ~~~~vviD~ETTGl~~~~~~~~~~Iiei-gav~~~~~~g~i~~~f~~lv~P~~~~~i~~~~~~i~GIt~~~l~~~~~~~~ 87 (204)
T 1w0h_A 9 YDYICIIDFEATCEEGNPPEFVHEIIEF-PVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQ 87 (204)
T ss_dssp SSEEEECCCEECCCTTCCTTSCCCEEEE-EEEEEETTTCSEEEEEEEEBCCSSSCSCCHHHHHHHCCCHHHHHTSBCHHH
T ss_pred cCEEEEEEEecCCcCCCCCCCCCcEEEE-EEEEEECCCCEEeeeeeeEECCCCCCccCHHHHHHhCCCHHHHhCCCCHHH
Confidence 3468999999999764 455555 5555432367774 999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcccccCCCCeEEEeechhhhhh-hhcC
Q 025404 204 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLD-SLRM 245 (253)
Q Consensus 204 v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~-~l~~ 245 (253)
|+.++.+++.+.. ....+.+|||||+.||++ ||+.
T Consensus 88 v~~~~~~~l~~~~-------~~~~~~~lv~hn~~fD~~~~L~~ 123 (204)
T 1w0h_A 88 VLKKVIDWMKLKE-------LGTKYKYSLLTDGSWDMSKFLNI 123 (204)
T ss_dssp HHHHHHHHHHHTT-------BTTTBCEEEEESSTTTTHHHHHH
T ss_pred HHHHHHHHHHhcC-------CCCCCcEEEEEECcchHHHHHHH
Confidence 9999999994211 001234799999999997 9963
No 28
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=99.59 E-value=4.2e-16 Score=97.88 Aligned_cols=50 Identities=24% Similarity=0.443 Sum_probs=39.0
Q ss_pred CCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhh
Q 025404 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH 62 (253)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H 62 (253)
.||||+|+.|++.|...+.|..|+++ |++++| .|++||+.|.+.++|..|
T Consensus 1 SEKpy~C~~C~k~F~~~~~L~~H~~~--Ht~ekp~~C~~C~k~F~~~~~L~~H 51 (60)
T 4gzn_C 1 SERPFFCNFCGKTYRDASGLSRHRRA--HLGYRPRSCPECGKCFRDQSEVNRH 51 (60)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHHH--HHTCCCEECTTTCCEESSHHHHHHH
T ss_pred CCCCccCCCCCCEeCCHHHHHHHHHH--hCCCcCeECCCCCCCcCCHHHHHHH
Confidence 37999999999999999999999999 999877 665555555444444444
No 29
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=99.59 E-value=7.5e-16 Score=110.54 Aligned_cols=79 Identities=25% Similarity=0.537 Sum_probs=71.8
Q ss_pred CCCccccc--ccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCccccccccc
Q 025404 11 STARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (253)
Q Consensus 11 ~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~ 82 (253)
+++||.|+ .|++.|.....|..|+++ |.++++ .|+.|++.|.+...|..|+ +++|.|. |+
T Consensus 33 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~----------~~ 100 (119)
T 2jp9_A 33 GEKPYQCDFKDCERRFSRSDQLKRHQRR--HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCR----------WP 100 (119)
T ss_dssp TTCCEECCSTTCCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECC----------ST
T ss_pred CCCCccCCCCCCcCccCCHHHHHHHHHH--cCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCC----------CC
Confidence 57899999 799999999999999999 999988 9999999999999999998 5677762 47
Q ss_pred ccccccCChHHHHHHHHHc
Q 025404 83 LCMNIFDSPSSLIKHKEAC 101 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~h 101 (253)
.|++.|.+.+.|..|+++|
T Consensus 101 ~C~~~f~~~~~L~~H~~~H 119 (119)
T 2jp9_A 101 SCQKKFARSDELVRHHNMH 119 (119)
T ss_dssp TCCCEESSHHHHHHHHHTC
T ss_pred CCccccCCHHHHHHHHhcC
Confidence 7899999999999999987
No 30
>2gbz_A Oligoribonuclease; ORN, deddh, structural genomics, hydrolase; 2.30A {Xanthomonas campestris PV}
Probab=99.58 E-value=4.6e-16 Score=121.71 Aligned_cols=101 Identities=15% Similarity=0.254 Sum_probs=79.0
Q ss_pred CCCceeeeecccccCCC--CCcccccceeeeecCCCCe---EEeeeccCCCCc----ccceeee---ccCCHHhhcCCCC
Q 025404 133 RGPKAVAMDCEMVGGGS--NGTLDLCARVCLVDEDENV---IFHTYVQPQLPV----TNYRYEV---TGLTEEDIKNAMP 200 (253)
Q Consensus 133 ~~~~~~~~dcE~~g~~~--~~~~~ll~~v~iv~~~~~~---~~~~~v~P~~~i----~~~~~~~---~Git~~~l~~~~~ 200 (253)
...+++++|+||+|... +.++++ +.+. .+.+.++ .++.+|+|..++ +++..++ +|||++++.++++
T Consensus 7 ~~~~~vviD~ETTGl~p~~d~IieI-gav~-~~~~~~~~~~~~~~~v~p~~~i~~~~~~~~~~~~~itGIt~~~l~~~p~ 84 (194)
T 2gbz_A 7 GNDRLIWIDLEMTGLDTDRDSIIEI-ATIV-TDAQLNVLAEGPELAIAHSLETLEAMDEWNRNQHRRSGLWQRVLDSQVT 84 (194)
T ss_dssp -CCEEEEEEEEESCSCTTTCCEEEE-EEEE-EETTCCEEEECCCEECCCCHHHHHTSCSHHHHHHHHHTHHHHHHHCCCC
T ss_pred CCCCEEEEEeECCCCCCCCCccEEE-EEEE-EcCCcceeccCceEEEeCCHHHhhccchHHHHHHHhhCCCHHHHhcCCC
Confidence 34568999999999763 456666 6555 4444433 378899998776 5555555 9999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccCCCCeE------EEeechhhhhhhhcCCCCC
Q 025404 201 LKEVKDKILEILNNGESTGRLMLDDGKARL------LVGHGLEHDLDSLRMNYPD 249 (253)
Q Consensus 201 ~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~------lv~h~~~~D~~~l~~~~~~ 249 (253)
+.+|+.++.+++ ++.+ |||||+.||+.||+...++
T Consensus 85 ~~ev~~~~~~~l--------------~~~~~~~~~~lvghn~~FD~~fL~~~~~~ 125 (194)
T 2gbz_A 85 HAQAEAQTVAFL--------------GEWIRAGASPMCGNSICQDRRFLHRQMSR 125 (194)
T ss_dssp HHHHHHHHHHHH--------------TTTCCTTSSCEEESSHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHH--------------HHhCCCCCceEEecCHHHhHHHHHHHHHH
Confidence 999999999999 5555 9999999999999876543
No 31
>1zbh_A 3'-5' exonuclease ERI1; histone mRNA 3'-END-specific recognition, structures of 3'- exonuclease and ITS RNA complex, hydrolase/RNA complex; HET: AMP; 3.00A {Homo sapiens}
Probab=99.57 E-value=1.1e-15 Score=127.29 Aligned_cols=104 Identities=17% Similarity=0.314 Sum_probs=83.6
Q ss_pred CCceeeeecccccCC------CCCcccccceeeeecCCCCe--EEeeeccCCC--CcccceeeeccCCHHhhcCCCCHHH
Q 025404 134 GPKAVAMDCEMVGGG------SNGTLDLCARVCLVDEDENV--IFHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKE 203 (253)
Q Consensus 134 ~~~~~~~dcE~~g~~------~~~~~~ll~~v~iv~~~~~~--~~~~~v~P~~--~i~~~~~~~~Git~~~l~~~~~~~~ 203 (253)
...++++|+||+|.. .+.++++ +.+.+...++++ .|+.+|+|.. +|+++.+++||||+++|+++++|.+
T Consensus 77 ~~~~vviD~ETTGl~~~~~~~~~~IIeI-gaV~v~~~~g~i~~~f~~lV~P~~~~~i~~~~~~ihGIt~e~v~~ap~~~e 155 (299)
T 1zbh_A 77 YDYICIIDFEATCEEGNPPEFVHEIIEF-PVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQ 155 (299)
T ss_dssp CSEEEEECCEECCCTTCCTTCCCCEEEE-EEEEEETTTCCEEEEEEEEBCCSSSCSCCHHHHHHHCCCHHHHHTSBCHHH
T ss_pred CceEEEEEeecccCCCCCCCCCCceEEE-EEEEEECCCCeEeeeeeeeecCCCCCCCCHHHHHHhCCCHHHHhcCCCHHH
Confidence 456899999999974 3456666 666665445777 4999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcccccCCCCeEEEeechhhhhh-hhcC
Q 025404 204 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLD-SLRM 245 (253)
Q Consensus 204 v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~-~l~~ 245 (253)
|+.+|.+++.+... .+.+.+|||||+.||+. ||+.
T Consensus 156 vl~~f~~~l~~~~~-------~~~~~~lVahn~~fD~~~fL~~ 191 (299)
T 1zbh_A 156 VLKKVIDLMKLKEL-------GTKYKYSLLTDGSWDMSKFLNI 191 (299)
T ss_dssp HHHHHHHHHHHTTB-------TTTBCEEEEESSSHHHHTHHHH
T ss_pred HHHHHHHHHhhccc-------CCCCcEEEEEeCHHHHHHHHHH
Confidence 99999999932100 00125999999999999 9975
No 32
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=99.57 E-value=2e-16 Score=107.67 Aligned_cols=81 Identities=17% Similarity=0.316 Sum_probs=69.8
Q ss_pred CCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhhCCCCCCCcCCcccccccccccccccCC
Q 025404 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDS 90 (253)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~k~f~~ 90 (253)
++||.|+.|++.|.....|..|+++ |+++++ .|+.|++.|.+.+.|..|+.... +. ...|+.|++.|..
T Consensus 1 ek~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~-----~~---~~~c~~C~~~f~~ 70 (88)
T 1llm_C 1 MKPFQCRICMRNFSRSDHLTTHIRT--HTGEKPFACDICGRKFARSDERKRHRDIQH-----IL---PILEDKVEELLSK 70 (88)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHH--HHCCCCEECTTTCCEESSHHHHHHHHHHHT-----HH---HHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHH--cCCCCCccCCCCCCccCCHHHHHHHHHHhC-----CC---cchHHHHHHHHHH
Confidence 6899999999999999999999999 999999 99999999999999999982111 01 1138889999999
Q ss_pred hHHHHHHHHHcc
Q 025404 91 PSSLIKHKEACS 102 (253)
Q Consensus 91 ~~~l~~H~~~h~ 102 (253)
...|..|++.++
T Consensus 71 ~~~L~~H~~~~h 82 (88)
T 1llm_C 71 NYHLENEVARLK 82 (88)
T ss_dssp HHHHHHHHHHHH
T ss_pred HhhhHHHHHHHH
Confidence 999999998765
No 33
>3mxm_B Three prime repair exonuclease 1; RNAse H-like fold, polyproline type II helix, hydrolase-DNA; HET: DNA; 1.75A {Mus musculus} SCOP: c.55.3.5 PDB: 3mxj_B 2ioc_B 3mxi_B* 3b6o_A* 2o4g_A* 3b6p_A* 2o4i_A 2oa8_A
Probab=99.56 E-value=1.1e-15 Score=123.48 Aligned_cols=102 Identities=16% Similarity=0.179 Sum_probs=84.3
Q ss_pred CCceeeeecccccCC--CCCcccccceeeeecCC--------C---------Ce--EEeeeccCCCCcccceeeeccCCH
Q 025404 134 GPKAVAMDCEMVGGG--SNGTLDLCARVCLVDED--------E---------NV--IFHTYVQPQLPVTNYRYEVTGLTE 192 (253)
Q Consensus 134 ~~~~~~~dcE~~g~~--~~~~~~ll~~v~iv~~~--------~---------~~--~~~~~v~P~~~i~~~~~~~~Git~ 192 (253)
...++++|+||+|.. .+.++++ +.+.+.+.. + ++ .++.+|+|..+|++..+++||||+
T Consensus 11 ~~~~vv~D~ETTGl~~~~d~IiEI-gav~v~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~li~P~~~i~~~~~~i~GIt~ 89 (242)
T 3mxm_B 11 MQTLIFLDLEATGLPSSRPEVTEL-CLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSK 89 (242)
T ss_dssp CSEEEEEEEEESSCGGGCCCEEEE-EEEEEEHHHHHTSCCCCSSSCCCCCCCSCCEEEEEECCCSSCCCHHHHHHHCCCH
T ss_pred cceEEEEEeecCCCCCCCCeeEEE-EEEEecCCcccccccccccccccccccchhheeEEEECCCCCCCHHHHHhcCCCH
Confidence 345899999999975 5677777 777775431 1 33 789999999999999999999999
Q ss_pred HhhcCC--CCHH-HHHHHHHHHHhcCCCCCcccccCCCC----eEEEeech-hhhhhhhcCCCCCC
Q 025404 193 EDIKNA--MPLK-EVKDKILEILNNGESTGRLMLDDGKA----RLLVGHGL-EHDLDSLRMNYPDH 250 (253)
Q Consensus 193 ~~l~~~--~~~~-~v~~~l~~~~~~~~~~~~~~~~~~~~----~~lv~h~~-~~D~~~l~~~~~~~ 250 (253)
++|.++ |+|. +|+.+|.+++ ++ .+|||||+ .||+.||+....+.
T Consensus 90 ~~l~~~g~p~~~~ev~~~~~~fl--------------~~~~~~~~lVaHNav~FD~~fL~~~~~r~ 141 (242)
T 3mxm_B 90 AELEVQGRQRFDDNLAILLRAFL--------------QRQPQPCCLVAHNGDRYDFPLLQTELARL 141 (242)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHH--------------HTSCSSEEEEETTTTTTHHHHHHHHHHTS
T ss_pred HHHHhcCCCchhHHHHHHHHHHH--------------hcCCCCCEEEEcCChHhhHHHHHHHHHHc
Confidence 999998 8996 9999999999 45 89999995 99999998654433
No 34
>2xri_A ERI1 exoribonuclease 3; hydrolase, metal binding; 2.15A {Homo sapiens}
Probab=99.55 E-value=1.5e-15 Score=121.49 Aligned_cols=95 Identities=21% Similarity=0.350 Sum_probs=80.9
Q ss_pred CceeeeecccccCCCC----CcccccceeeeecCCCCe--EEeeeccCCC--CcccceeeeccCCHHhhcCCCCHHHHHH
Q 025404 135 PKAVAMDCEMVGGGSN----GTLDLCARVCLVDEDENV--IFHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKEVKD 206 (253)
Q Consensus 135 ~~~~~~dcE~~g~~~~----~~~~ll~~v~iv~~~~~~--~~~~~v~P~~--~i~~~~~~~~Git~~~l~~~~~~~~v~~ 206 (253)
..++++|+||+|.... .++++ +.+.+.+..+++ .++.+|+|.. +|+++.++++|||+++|++++++.+|++
T Consensus 31 ~~~vviD~ETTGl~~~~d~~~IieI-gav~v~~~~~~i~~~f~~lV~P~~~~~i~~~~~~ltGIt~~~v~~a~~~~~v~~ 109 (224)
T 2xri_A 31 HYFLVLDFEATCDKPQIHPQEIIEF-PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLE 109 (224)
T ss_dssp SEEEEECCEECCCC-CCSSCCEEEE-EEEEEETTTCCEEEEEEEECCCSSSCSCCHHHHHHHCCCHHHHTTCCCHHHHHH
T ss_pred CeEEEEEEEcCCCCCCCCCcceEEE-EEEEEecCCcEEeeeeeeEECCCCCCcCCHHHHHHhCcCHHHHcCCCCHHHHHH
Confidence 4689999999997643 56666 666665444566 4999999997 8999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcccccCCCCeEEEeech--------hhhhhh-hc
Q 025404 207 KILEILNNGESTGRLMLDDGKARLLVGHGL--------EHDLDS-LR 244 (253)
Q Consensus 207 ~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~--------~~D~~~-l~ 244 (253)
++.+++ ++.+|||||+ .||++| |+
T Consensus 110 ~f~~~l--------------~~~~lv~hn~~~~~~t~g~fD~~fll~ 142 (224)
T 2xri_A 110 RVDEWM--------------AKEGLLDPNVKSIFVTCGDWDLKVMLP 142 (224)
T ss_dssp HHHHHH--------------HHTTTTSTTSCEEEEESSSHHHHTHHH
T ss_pred HHHHHH--------------hhcccccCCCceEEEEeChhhHHHHHH
Confidence 999999 6779999999 999997 63
No 35
>3u3y_B Three prime repair exonuclease 1; RNAse H fold, 3' exonuclease, homodimer, hydrolase-DNA compl; HET: BU1; 2.28A {Mus musculus} PDB: 3u6f_B*
Probab=99.55 E-value=1.8e-15 Score=125.48 Aligned_cols=106 Identities=14% Similarity=0.152 Sum_probs=84.6
Q ss_pred CCceeeeecccccCC--CCCcccccceeeeecCC--------C---------C--eEEeeeccCCCCcccceeeeccCCH
Q 025404 134 GPKAVAMDCEMVGGG--SNGTLDLCARVCLVDED--------E---------N--VIFHTYVQPQLPVTNYRYEVTGLTE 192 (253)
Q Consensus 134 ~~~~~~~dcE~~g~~--~~~~~~ll~~v~iv~~~--------~---------~--~~~~~~v~P~~~i~~~~~~~~Git~ 192 (253)
...++++|+||+|.. .+.++++ +.+.+.+.. | + ..++.+|+|..+|+...+++||||+
T Consensus 11 ~~tfVv~DlETTGL~~~~d~IIEI-gaV~v~~~~l~~~~~~~g~~~~~~~~~~v~~~~~~lI~P~~~I~~~a~~IhGIT~ 89 (314)
T 3u3y_B 11 MQTLIFLDLEATGLPSSRPEVTEL-CLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSK 89 (314)
T ss_dssp CSEEEEEEEEESSCGGGCCCEEEE-EEEEEEHHHHHC--CCCSSSCCCCCCCSSCEEEEEECBCSSCCCHHHHHHHSCCH
T ss_pred cCCEEEEEEECCCCCCCCCeEEEE-EEEEEECCccccccccccccccccccceeeeeEEEEECCCCCCCHHHHHhcCCCH
Confidence 345899999999975 5677787 777764321 0 1 2689999999999999999999999
Q ss_pred HhhcCC--CCH-HHHHHHHHHHHhcCCCCCcccccCCCCeEEEeec-hhhhhhhhcCCCCCC
Q 025404 193 EDIKNA--MPL-KEVKDKILEILNNGESTGRLMLDDGKARLLVGHG-LEHDLDSLRMNYPDH 250 (253)
Q Consensus 193 ~~l~~~--~~~-~~v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~-~~~D~~~l~~~~~~~ 250 (253)
++|.++ |+| ++|+++|.+++.+. +...+||||| +.||+.||+....+.
T Consensus 90 e~l~~aG~P~f~~ev~~~l~~fL~~~----------~~~~vLVAHNga~FD~~FL~~el~r~ 141 (314)
T 3u3y_B 90 AELEVQGRQRFDDNLAILLRAFLQRQ----------PQPCCLVAHNGDRYDFPLLQTELARL 141 (314)
T ss_dssp HHHHHTTCCBSCHHHHHHHHHHHHTS----------CSSEEEEETTTTTTHHHHHHHHHHTS
T ss_pred HHHHhCCCCCcHHHHHHHHHHHHhcC----------CCCcEEEEeCcHHHHHHHHHHHHHHc
Confidence 999998 899 79999999999210 0228999999 999999998644443
No 36
>3tr8_A Oligoribonuclease; transcription, hydrolase; 2.50A {Coxiella burnetii}
Probab=99.55 E-value=1.4e-15 Score=117.50 Aligned_cols=107 Identities=17% Similarity=0.247 Sum_probs=78.5
Q ss_pred CCCceeeeecccccCC--CCCcccccceeeeecCCCCeE---Eeeecc-CCC---Ccccc---eeeeccCCHHhhcCCCC
Q 025404 133 RGPKAVAMDCEMVGGG--SNGTLDLCARVCLVDEDENVI---FHTYVQ-PQL---PVTNY---RYEVTGLTEEDIKNAMP 200 (253)
Q Consensus 133 ~~~~~~~~dcE~~g~~--~~~~~~ll~~v~iv~~~~~~~---~~~~v~-P~~---~i~~~---~~~~~Git~~~l~~~~~ 200 (253)
....++++|+||||.. .+.++++ +.+ +++.++.++ +..+|+ |.. .++++ ...++|||+++++++|+
T Consensus 7 ~~~~~v~~D~ETTGL~p~~d~IiEI-gaV-~~d~~~~i~~~~~~~~i~~p~~~l~~~~~~~~~ih~ltGIt~~~l~~~p~ 84 (186)
T 3tr8_A 7 SDDNLIWLDLEMTGLDPERDRIIEI-ATI-VTNSHLDILAEGPAFAIHQPDKLLTAMDNWNTSHHTASGLLERVKNSSVD 84 (186)
T ss_dssp CTTCEEEEEEEESSSCTTTCCEEEE-EEE-EECTTCCEEEECCCEECCCCHHHHTTSCHHHHHHHHHTSHHHHHHTCCCC
T ss_pred CCCcEEEEEEECCCCCCCCCceEEE-EEE-EEcCCeEEeeeeEEEEEeCCccccccCCcccHHHHhccCCCHHHHhcCCC
Confidence 4457899999999975 5677777 777 666655653 344575 542 23444 44567999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccCCCCeEEEeechhhhhhhhcCCCCC
Q 025404 201 LKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPD 249 (253)
Q Consensus 201 ~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~~~~~~ 249 (253)
+++|..++++++.. |. . .++.+|||||+.||++||+-..++
T Consensus 85 ~~ev~~~~l~fl~~----~~-~---~~~~~lvghn~~FD~~FL~~~~~~ 125 (186)
T 3tr8_A 85 EVEAETLTLAFLEK----YV-S---AGKSPLCGNSVCQDRRFLSRYMPR 125 (186)
T ss_dssp HHHHHHHHHHHHTT----TS-C---TTCSCEEESSTHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHH----hc-c---CCCcEEEEEcHHHhHHHHHHHHHH
Confidence 99999999999921 00 0 145799999999999999876554
No 37
>1zbu_A ERI-1 homolog, 3'-5' exonuclease ERI1; hydrolase; HET: AMP; 3.00A {Homo sapiens}
Probab=99.54 E-value=1.4e-15 Score=128.61 Aligned_cols=104 Identities=17% Similarity=0.314 Sum_probs=84.0
Q ss_pred CCceeeeecccccCC------CCCcccccceeeeecCCCCe--EEeeeccCCC--CcccceeeeccCCHHhhcCCCCHHH
Q 025404 134 GPKAVAMDCEMVGGG------SNGTLDLCARVCLVDEDENV--IFHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKE 203 (253)
Q Consensus 134 ~~~~~~~dcE~~g~~------~~~~~~ll~~v~iv~~~~~~--~~~~~v~P~~--~i~~~~~~~~Git~~~l~~~~~~~~ 203 (253)
...++++|+||+|.. .+.++++ +.|.+...++++ .|+.+|+|.. +|+++++++||||+++|+++++|.+
T Consensus 127 ~~~~vviD~ETTGl~~~~~~~~deIIEI-gaV~vd~~~g~i~~~f~~lVkP~~~~~I~~~~t~ihGIT~e~v~~ap~~~e 205 (349)
T 1zbu_A 127 YDYICIIDFEATCEEGNPPEFVHEIIEF-PVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQ 205 (349)
T ss_dssp CSEEEECCCEECCCTTCCTTCCCCEEEC-CEEEEETTTTEEEEEECCBEECSSSCSCCHHHHHHHCCCHHHHHTSEEHHH
T ss_pred CCeEEEEEEecCCCCCcCCCCCCeEEEE-EEEEEECCCceEeEEEEEEECCCCCCCCCHHHHHHhCCCHHHHhCCCCHHH
Confidence 456899999999973 3566776 777775445676 4999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcccccCCCCeEEEeechhhhhh-hhcC
Q 025404 204 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLD-SLRM 245 (253)
Q Consensus 204 v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~-~l~~ 245 (253)
|+.+|.+++.+... .....+|||||+.||+. ||+.
T Consensus 206 Vl~~f~~~l~~~~~-------~~~~~~lVaHNa~FD~~~fL~~ 241 (349)
T 1zbu_A 206 VLKKVIDLMKLKEL-------GTKYKYSLLTDGSWDMSKFLNI 241 (349)
T ss_dssp HHHHHHHHHHHTTB-------TTTBCEEEEESSSHHHHTHHHH
T ss_pred HHHHHHHHHhcccc-------cCCCcEEEEECcHhhHHHHHHH
Confidence 99999999932100 00125999999999999 9975
No 38
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.54 E-value=8e-15 Score=105.83 Aligned_cols=83 Identities=28% Similarity=0.454 Sum_probs=70.7
Q ss_pred CCCcccccccccccCCHHHHHHhhhhc-CCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccc
Q 025404 11 STARHKCVACYKQFKRKDHLIEHMKIS-YHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNL 83 (253)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~~-~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~ 83 (253)
+++||.|+.|++.|.....|..|++.+ .|.++++ .|+.|++.|.+...|..|+ +++|. |+.
T Consensus 32 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~ 99 (124)
T 2dlq_A 32 GEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYK------------CSS 99 (124)
T ss_dssp SCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEE------------CSS
T ss_pred CCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcc------------CCC
Confidence 578999999999999999999999852 1567777 9999999999999999998 45665 566
Q ss_pred cccccCChHHHHHHHH-HccCCC
Q 025404 84 CMNIFDSPSSLIKHKE-ACSLSA 105 (253)
Q Consensus 84 C~k~f~~~~~l~~H~~-~h~~~~ 105 (253)
|++.|.+.+.|..|++ .|.+++
T Consensus 100 C~~~f~~~~~l~~H~~~~H~~~~ 122 (124)
T 2dlq_A 100 CSQQFMQKKDLQSHMIKLHSGPS 122 (124)
T ss_dssp SCCEESSHHHHHHHHHHTSSCSS
T ss_pred ccchhCCHHHHHHHHHHHCCCCC
Confidence 8888999999999998 466653
No 39
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=99.54 E-value=5.2e-15 Score=100.54 Aligned_cols=78 Identities=27% Similarity=0.538 Sum_probs=67.8
Q ss_pred CCCcccccc--cccccCCHHHHHHhhhhcCCCCCcc-ccc--cccccccCHHHHhhhh-----CCCCCCCcCCccccccc
Q 025404 11 STARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRG 80 (253)
Q Consensus 11 ~~k~~~C~~--C~k~f~~~~~l~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~ 80 (253)
+.++|.|+. |++.|.....|..|+++ |.++++ .|+ .|++.|.+...|..|+ +++|.
T Consensus 2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~------------ 67 (89)
T 2wbs_A 2 RTATHTCDYAGCGKTYTKSSHLKAHLRT--HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ------------ 67 (89)
T ss_dssp -CCCEECCSTTTCCEESSHHHHHHHHTT--SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEE------------
T ss_pred CCCCeeCCCCCCCCcCCCHHHHHHHHHh--cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCcc------------
Confidence 467899998 99999999999999999 999888 997 6999999999999998 45665
Q ss_pred ccccccccCChHHHHHHHHHcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACS 102 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~ 102 (253)
|+.|++.|.+.+.|..|+++|.
T Consensus 68 C~~C~~~f~~~~~l~~H~~~H~ 89 (89)
T 2wbs_A 68 CQKCDRAFSRSDHLALHMKRHF 89 (89)
T ss_dssp CSSSSCEESSHHHHHHHGGGGC
T ss_pred CCCCCcccCCHHHHHHHHHhhC
Confidence 5667788889999999998884
No 40
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.53 E-value=9.3e-15 Score=97.07 Aligned_cols=67 Identities=21% Similarity=0.303 Sum_probs=59.8
Q ss_pred CCCCCcccccc--cccccCCHHHHHHhhh-hcCCCCCcc-cccc--ccccccCHHHHhhhh-----CCCCCCCcCCcccc
Q 025404 9 KRSTARHKCVA--CYKQFKRKDHLIEHMK-ISYHSVHQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAHCSGIFS 77 (253)
Q Consensus 9 ~~~~k~~~C~~--C~k~f~~~~~l~~H~~-~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~ 77 (253)
++++++|.|.. |++.|.....|..|++ . |+++++ .|+. |++.|.+...|..|+ +++|.|..|++.|.
T Consensus 2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~--H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~ 79 (79)
T 2dlk_A 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQ--HIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG 79 (79)
T ss_dssp CSCCSSEECSSTTTCCEESSHHHHHHHHHHG--GGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred CCCCCCccCCCCCCcCccCCHHHHHHHHHHH--hCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence 56889999986 9999999999999999 7 998888 9998 999999999999998 67888888888773
No 41
>1y97_A Three prime repair exonuclease 2; TREX2, hydrolase; 2.50A {Homo sapiens} SCOP: c.55.3.5
Probab=99.48 E-value=4.1e-14 Score=114.10 Aligned_cols=103 Identities=21% Similarity=0.228 Sum_probs=81.2
Q ss_pred CCCceeeeecccccCC--CCCcccccceeeeecC--------------CCCe--EEeeeccCCCCcccceeeeccCCHHh
Q 025404 133 RGPKAVAMDCEMVGGG--SNGTLDLCARVCLVDE--------------DENV--IFHTYVQPQLPVTNYRYEVTGLTEED 194 (253)
Q Consensus 133 ~~~~~~~~dcE~~g~~--~~~~~~ll~~v~iv~~--------------~~~~--~~~~~v~P~~~i~~~~~~~~Git~~~ 194 (253)
....++++|+||+|.. .+.++++ +.+.+.+. .+++ .++.+|+|..+|+++.+++||||+++
T Consensus 8 ~~~~~v~iD~ETTGl~~~~~~IieI-g~v~~~~~~~~~~~~~~~~~~~~~~i~~~f~~lv~P~~~i~~~~~~i~GIt~~~ 86 (238)
T 1y97_A 8 RAETFVFLDLEATGLPSVEPEIAEL-SLFAVHRSSLENPEHDESGALVLPRVLDKLTLCMCPERPFTAKASEITGLSSEG 86 (238)
T ss_dssp CCSEEEEEEEEESSCGGGCCCEEEE-EEEEEEHHHHTSCBC---CCCBCCSSCEEEEEECCCSSCCCHHHHHHHCCCHHH
T ss_pred ccCeEEEEEeeCCCcCCCCCcEEEE-EEEEecccccccccccccccccccccceeeEEEECCCCcCCHHHHHHhCCCHHH
Confidence 3456899999999975 3556666 66666432 1244 58999999999999999999999999
Q ss_pred h--cCCCCH-HHHHHHHHHHHhcCCCCCcccccCCCCeEEEeech-hhhhhhhcCC
Q 025404 195 I--KNAMPL-KEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLRMN 246 (253)
Q Consensus 195 l--~~~~~~-~~v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~-~~D~~~l~~~ 246 (253)
| .++|+| ++|+..|.+++.. .+.+.+|||||+ .||+.||+-.
T Consensus 87 l~~~~~p~f~~~v~~~l~~fl~~----------~~~~~~lVahN~~~FD~~fL~~~ 132 (238)
T 1y97_A 87 LARCRKAGFDGAVVRTLQAFLSR----------QAGPICLVAHNGFDYDFPLLCAE 132 (238)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHTT----------SCSSEEEEETTTTTTHHHHHHHH
T ss_pred HhhcCCCccHHHHHHHHHHHHHh----------CCCCCEEEecCchhhhHHHHHHH
Confidence 9 577999 5999999999921 011389999999 9999999753
No 42
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=7.4e-16 Score=110.10 Aligned_cols=93 Identities=9% Similarity=0.029 Sum_probs=77.1
Q ss_pred HHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhhCC--CCCCCcCCccccccccccccccc--CChHHHHHHHHHcc
Q 025404 28 DHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTG--PLSKAHCSGIFSDRGCNLCMNIF--DSPSSLIKHKEACS 102 (253)
Q Consensus 28 ~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~--~~~C~~C~~~f~~~~C~~C~k~f--~~~~~l~~H~~~h~ 102 (253)
..|..|+++ |+++++ .|+.|++.|.+...|..|+.. .+.+... ..|..|++.| .....|..|+++|+
T Consensus 5 ~~l~~H~~~--H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~------~~C~~C~~~f~f~~~~~l~~H~~~H~ 76 (115)
T 2dmi_A 5 SSGKLYGSI--FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNH------ETDNNNPKRWSKPRKRSLLEMEGKED 76 (115)
T ss_dssp CCCCCCCCC--CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCC------CCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred hhhhhheee--eCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCC------ccCCCCCcccccccHHHHHHHhhccC
Confidence 457789999 999999 999999999999999999832 3222111 1277888888 88999999999999
Q ss_pred CCCCCC---ccccCccchhhhhhcccccc
Q 025404 103 LSAPVP---FEKTLSNAESQKKISGAIDE 128 (253)
Q Consensus 103 ~~~~~~---C~~~f~~~~~l~~h~~~~~~ 128 (253)
+++||. |++.|.....|..|+..+..
T Consensus 77 ~~~~~~C~~C~k~f~~~~~L~~H~~~hh~ 105 (115)
T 2dmi_A 77 AQKVLKCMYCGHSFESLQDLSVHMIKTKH 105 (115)
T ss_dssp CCSSCBCSSSCCBCSSHHHHHHHHHHTTT
T ss_pred CCcceECCCCCCccCCHHHHHHHHHHhCC
Confidence 999997 99999999999999976553
No 43
>2f96_A Ribonuclease T; RNAse, RNT, RNAse T, tRNA hydrolase, SAD, PS protein structure initiative, midwest center for structural genomics; 2.09A {Pseudomonas aeruginosa} SCOP: c.55.3.5
Probab=99.48 E-value=2.3e-14 Score=114.51 Aligned_cols=106 Identities=24% Similarity=0.326 Sum_probs=80.4
Q ss_pred CCceeeeecccccCCC--CCcccccceeeee-cCCCCe----EEeeeccC--CCCcccceeeeccCCHHh-hcCCCCHHH
Q 025404 134 GPKAVAMDCEMVGGGS--NGTLDLCARVCLV-DEDENV----IFHTYVQP--QLPVTNYRYEVTGLTEED-IKNAMPLKE 203 (253)
Q Consensus 134 ~~~~~~~dcE~~g~~~--~~~~~ll~~v~iv-~~~~~~----~~~~~v~P--~~~i~~~~~~~~Git~~~-l~~~~~~~~ 203 (253)
...++++|+||+|... +.++++ +.+.+. +.+|++ .++.+|+| ..+|+++.+++||||+++ +++++++.+
T Consensus 28 ~~~~vviD~ETTGl~~~~~~IieI-g~v~~~~~~~g~i~~~~~f~~lV~P~~~~~i~~~~~~ihGIt~e~~v~~~~~~~~ 106 (224)
T 2f96_A 28 GYLPVVVDVETGGFNSATDALLEI-AATTVGMDEKGFLFPEHTYFFRIEPFEGANIEPAALEFTGIKLDHPLRMAVQEEA 106 (224)
T ss_dssp TEEEEEEEEEESSSCTTTBCEEEE-EEEEEEECTTSCEEEEEEEEEEBCCCTTCBCCHHHHHHHTCCTTCTTCCCBCHHH
T ss_pred CCcEEEEEeeCCCCCCCCCeeEEE-EEEEEEEcCCCcccccceEEEEECCCCCCCCCHHHHHHhCCCHHHHHhcCCCHHH
Confidence 3457999999999763 456666 666663 125664 58899999 578999999999999985 889999999
Q ss_pred HHHHHHHHHhcCCCCCcccccCCCCeEEEeechhhhhhhhcC
Q 025404 204 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM 245 (253)
Q Consensus 204 v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~~ 245 (253)
|..++.++|.+- +......+.+|||||+.||+.||+.
T Consensus 107 v~~~~~~~l~~~-----~~~~~~~~~~lV~hn~~FD~~fL~~ 143 (224)
T 2f96_A 107 ALTEIFRGIRKA-----LKANGCKRAILVGHNSSFDLGFLNA 143 (224)
T ss_dssp HHHHHHHHHHHH-----HHHTTCSEEEEEETTHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hhhcccCCCEEEEeChhhhHHHHHH
Confidence 999999998210 0000002679999999999999974
No 44
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=99.48 E-value=2e-14 Score=96.64 Aligned_cols=74 Identities=27% Similarity=0.501 Sum_probs=66.9
Q ss_pred cccc--cccccccCCHHHHHHhhhhcCCCCCcc-cccc--ccccccCHHHHhhhh---CCCCCCCcCCcccccccccc--
Q 025404 14 RHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNL-- 83 (253)
Q Consensus 14 ~~~C--~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~---~~~~~C~~C~~~f~~~~C~~-- 83 (253)
||.| +.|++.|.....|..|+++ |.++++ .|+. |++.|.+...|..|+ .+ |. |..
T Consensus 1 p~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~------------C~~~~ 65 (85)
T 2j7j_A 1 MYVCHFENCGKAFKKHNQLKVHQFS--HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YP------------CKKDD 65 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHH--HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-EE------------CCSCS
T ss_pred CccCCCCCCCcccCCHHHHHHHHHH--hCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CC------------CCCCC
Confidence 6899 9999999999999999999 999999 9988 999999999999998 33 44 455
Q ss_pred -cccccCChHHHHHHHHHcc
Q 025404 84 -CMNIFDSPSSLIKHKEACS 102 (253)
Q Consensus 84 -C~k~f~~~~~l~~H~~~h~ 102 (253)
|++.|.+.+.|..|+++|+
T Consensus 66 ~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 66 SCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp SCCCEESSHHHHHHHHHHCC
T ss_pred CCCCccCCHHHHHHHHHhcC
Confidence 8899999999999999885
No 45
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.47 E-value=7.4e-14 Score=104.92 Aligned_cols=107 Identities=16% Similarity=0.222 Sum_probs=82.1
Q ss_pred CCcc-ccccccccccCHHHHhhhhC------CCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCCCC-----
Q 025404 41 VHQP-KCAVCQKLSKSFESLREHLT------GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP----- 108 (253)
Q Consensus 41 ~~~~-~C~~C~~~f~~~~~l~~H~~------~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~----- 108 (253)
+... .|..|++.|.+...|..|+. .+.....|. ...|..|++.|.+...|..|+++|++++||.
T Consensus 22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~----~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~ 97 (155)
T 2rpc_A 22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY----WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPG 97 (155)
T ss_dssp TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCC----BTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTT
T ss_pred hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCcccc----ccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCC
Confidence 3445 99999999999999999982 122222221 1248999999999999999999999999985
Q ss_pred ccccCccchhhhhhccccccccccCCCceeeeeccc--ccCCCCCccccccee
Q 025404 109 FEKTLSNAESQKKISGAIDEKRTCRGPKAVAMDCEM--VGGGSNGTLDLCARV 159 (253)
Q Consensus 109 C~~~f~~~~~l~~h~~~~~~~r~~~~~~~~~~dcE~--~g~~~~~~~~ll~~v 159 (253)
|++.|.....|..|+..+.+. ..+.|+. |+..+.....+..++
T Consensus 98 C~~~f~~~~~L~~H~~~h~~~--------~~~~C~~~~C~k~f~~~~~L~~H~ 142 (155)
T 2rpc_A 98 CGKIFARSENLKIHKRTHTGE--------KPFKCEFEGCDRRFANSSDRKKHM 142 (155)
T ss_dssp TCCEESCHHHHHHHHTTTCSS--------CSBCCSSTTCCCCBSSHHHHHHSS
T ss_pred CCCccCCHHHHHHHHHhhCCC--------CCccCCCCCCCCccCCHHHHHHHH
Confidence 788999999999999766542 3477886 998887777663333
No 46
>3cg7_A CRN-4, cell death-related nuclease 4; hydrolase, apoptosis, 3'-5' exonuclease, deddh; 2.50A {Caenorhabditis elegans} PDB: 3cm5_A 3cm6_A
Probab=99.46 E-value=2e-14 Score=120.01 Aligned_cols=95 Identities=21% Similarity=0.308 Sum_probs=78.9
Q ss_pred CceeeeecccccCCCC-----CcccccceeeeecCCCCe----EEeeeccCCCC--cccceeeeccCCHHhhcCCCCHHH
Q 025404 135 PKAVAMDCEMVGGGSN-----GTLDLCARVCLVDEDENV----IFHTYVQPQLP--VTNYRYEVTGLTEEDIKNAMPLKE 203 (253)
Q Consensus 135 ~~~~~~dcE~~g~~~~-----~~~~ll~~v~iv~~~~~~----~~~~~v~P~~~--i~~~~~~~~Git~~~l~~~~~~~~ 203 (253)
..++++|+||+|.... .++++ +.+.+-..+|++ .++.+|+|... |+++++++||||+++|+++++|.+
T Consensus 19 ~~~vviD~ETTGl~~~~d~~~eIIEI-gaV~vd~~~g~i~~~~~f~~lV~P~~~p~i~~~~~~ltGIt~e~v~~ap~~~e 97 (308)
T 3cg7_A 19 DTLLILDFETTSDAANQDYPCEVIQF-AIVAYDVPNDKIREDISFNKYVKPVLNRTLTKNCVDFTGIPQRSIDTADTFDV 97 (308)
T ss_dssp SEEEEEEEEECCBTTBCSCCCCEEEE-EEEEEETTTTEEEEEEEEEEECBCSSBCSCCHHHHHHHCCCHHHHHTSCBHHH
T ss_pred CeEEEEEeecCCCCCCCCCCCCeEEE-EEEEEEcCCCEEeeccceeeEECCCCCCCCCHHHHHHcCCCHHHHhcCCCHHH
Confidence 4589999999997643 45555 555442236666 38999999984 999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcccccCCCCeEEEeech------hhhh-hhhc
Q 025404 204 VKDKILEILNNGESTGRLMLDDGKARLLVGHGL------EHDL-DSLR 244 (253)
Q Consensus 204 v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~------~~D~-~~l~ 244 (253)
|+.+|.+++ ++.+|||||+ .||+ .||+
T Consensus 98 vl~~f~~~l--------------~~~~lvahn~~lv~~g~fD~~~fL~ 131 (308)
T 3cg7_A 98 VYEQFQQWL--------------ITLGLEEGKFAFVCDSRQDLWRIAQ 131 (308)
T ss_dssp HHHHHHHHH--------------HHHCCCTTSEEEEESSSHHHHTHHH
T ss_pred HHHHHHHHH--------------HhCCcCCcceEEeccCcccHHHHHH
Confidence 999999999 6778899999 9999 7885
No 47
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.45 E-value=7.4e-14 Score=96.19 Aligned_cols=80 Identities=24% Similarity=0.319 Sum_probs=69.6
Q ss_pred CCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCCCC---c
Q 025404 39 HSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---F 109 (253)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C 109 (253)
+.++++ .|..|++.|.+...|..|+ +++|. |+.|++.|.....|..|+++|+++++|. |
T Consensus 3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C 70 (96)
T 2dmd_A 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYK------------CKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70 (96)
T ss_dssp CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEE------------CSSSCCEESSHHHHHHHHHHSCCCCCEECSSS
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEe------------CCCCCCccCCHHHHHHHHHHhCCCCCccCCCC
Confidence 567778 9999999999999999998 34444 6678889999999999999999999996 9
Q ss_pred cccCccchhhhhhcccccccc
Q 025404 110 EKTLSNAESQKKISGAIDEKR 130 (253)
Q Consensus 110 ~~~f~~~~~l~~h~~~~~~~r 130 (253)
++.|.....|..|++.+.+..
T Consensus 71 ~~~f~~~~~l~~H~~~h~~~~ 91 (96)
T 2dmd_A 71 PYASRNSSQLTVHLRSHTGDS 91 (96)
T ss_dssp SCEESSHHHHHHHHTTCCSCC
T ss_pred CCccCCHHHHHHHHHHhcCCC
Confidence 999999999999998776543
No 48
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.43 E-value=5.9e-14 Score=97.83 Aligned_cols=69 Identities=14% Similarity=0.171 Sum_probs=53.0
Q ss_pred CCCCCCcccccccccccCCHHHHHHhhh-hcCCCC---CccccccccccccCHHHHhhhhCCCCCCCcCCcccccccccc
Q 025404 8 PKRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSV---HQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNL 83 (253)
Q Consensus 8 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~H~~---~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~ 83 (253)
-.+|++||.|+.|++.|..++.|..|++ . |++ ++ ||. |..
T Consensus 12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~--H~~~~~ek----------------------pf~------------C~~ 55 (102)
T 2ghf_A 12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSE--HPNVVLNS----------------------SYV------------CVE 55 (102)
T ss_dssp CCCCCSSEECSSCSCEESCHHHHHHHHHHH--CSSCCCSC----------------------CEE------------ETT
T ss_pred cCCCCcCcCCCCCCCccCCHHHHHHHHHhh--CCCCCCCC----------------------CcC------------CCC
Confidence 4679999999999999999999999997 6 743 33 333 455
Q ss_pred cccccCChHHHHHH-HHHccCCCCCCcccc
Q 025404 84 CMNIFDSPSSLIKH-KEACSLSAPVPFEKT 112 (253)
Q Consensus 84 C~k~f~~~~~l~~H-~~~h~~~~~~~C~~~ 112 (253)
||+.|...+.|..| +++|++++||.|...
T Consensus 56 Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~ 85 (102)
T 2ghf_A 56 CNFLTKRYDALSEHNLKYHPGEENFKLTMV 85 (102)
T ss_dssp TTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred CCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence 66667777778888 678888888887653
No 49
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=99.43 E-value=4.6e-14 Score=88.51 Aligned_cols=51 Identities=25% Similarity=0.458 Sum_probs=27.9
Q ss_pred Ccc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCC
Q 025404 42 HQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLS 104 (253)
Q Consensus 42 ~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~ 104 (253)
|+| +|++||+.|.+.++|..|+ ++||. |++||++|.+.+.|..|+++|+|+
T Consensus 2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~------------C~~C~k~F~~~~~L~~H~~~Htge 58 (60)
T 4gzn_C 2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRS------------CPECGKCFRDQSEVNRHLKVHQNK 58 (60)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEE------------CTTTCCEESSHHHHHHHGGGGSCC
T ss_pred CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeE------------CCCCCCCcCCHHHHHHHhCccCCC
Confidence 344 5666666666666666555 34444 333445555555666666665554
No 50
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.43 E-value=3e-13 Score=89.32 Aligned_cols=64 Identities=33% Similarity=0.533 Sum_probs=48.8
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhhCCCCCCCcCCcccccccccccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNI 87 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~k~ 87 (253)
..+++||.|+.|++.|.....|..|+++ |+++++ .|+. |++.
T Consensus 13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~-----------------------------------C~~~ 55 (77)
T 2cot_A 13 QRERRRYKCDECGKSFSHSSDLSKHRRT--HTGEKPYKCDE-----------------------------------CGKA 55 (77)
T ss_dssp CCCSCSSBCSSSCCBCSCHHHHHHHHTT--TCCSCSEECSS-----------------------------------SCCE
T ss_pred CCCCCCEECCCCCcccCCHHHHHHHHHH--cCCCcCeeCCC-----------------------------------CCCc
Confidence 5578999999999999999999999999 877655 4444 4555
Q ss_pred cCChHHHHHHHHHccCCCCCCc
Q 025404 88 FDSPSSLIKHKEACSLSAPVPF 109 (253)
Q Consensus 88 f~~~~~l~~H~~~h~~~~~~~C 109 (253)
|.....|..|+++|++++||+|
T Consensus 56 f~~~~~L~~H~~~H~~~~p~~C 77 (77)
T 2cot_A 56 FIQRSHLIGHHRVHTGSGPSSG 77 (77)
T ss_dssp ESSHHHHHHHGGGSCCCCCCCC
T ss_pred cCCHHHHHHHHHHhCCCCCCCC
Confidence 5666666777777777777765
No 51
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.41 E-value=9.7e-14 Score=97.73 Aligned_cols=81 Identities=15% Similarity=0.154 Sum_probs=70.5
Q ss_pred hhhhcCCCCCcc-ccccccccccCHHHHhhhh---CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCCCC
Q 025404 33 HMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (253)
Q Consensus 33 H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~ 108 (253)
++++ |+++++ .|..|++.|.....|..|+ +++|. |..|++.|.....|..|++ |++++||.
T Consensus 7 ~~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~------------C~~C~~~f~~~~~l~~H~~-H~~~~~~~ 71 (107)
T 1wjp_A 7 GASP--VENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV------------CPYCSLRFFSPELKQEHES-KCEYKKLT 71 (107)
T ss_dssp CCCC--CCCCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBC------------CTTTCCCBSSHHHHHHHHH-HCSTGGGE
T ss_pred cCcc--cCCCcCeECCCCCCccCCHHHHHHHHHHCCCCcc------------CCCCCCccCCHHHHHHHHH-cCCCCCcc
Confidence 4667 899999 9999999999999999998 55665 5667788899999999996 99999997
Q ss_pred ---ccccCccchhhhhhcc-cccc
Q 025404 109 ---FEKTLSNAESQKKISG-AIDE 128 (253)
Q Consensus 109 ---C~~~f~~~~~l~~h~~-~~~~ 128 (253)
|++.|.....|..|++ .+.+
T Consensus 72 C~~C~~~f~~~~~L~~H~~~~H~~ 95 (107)
T 1wjp_A 72 CLECMRTFKSSFSIWRHQVEVHNQ 95 (107)
T ss_dssp EGGGTEECSSHHHHHHHHHHTSCC
T ss_pred CccccchhCCHHHHHHHHHHHcCC
Confidence 8999999999999996 5543
No 52
>3v9w_A Ribonuclease T; DEDD nucleases family, EXO-nucleases, hydrolase-DNA complex; HET: DNA; 1.70A {Escherichia coli} PDB: 3ngy_A 3v9u_A* 3ngz_A* 3va3_A* 3v9z_A* 3nh0_A 3nh2_A 3nh1_A* 3v9s_A* 3v9x_A* 3va0_A* 2is3_A
Probab=99.41 E-value=9.7e-14 Score=111.72 Aligned_cols=107 Identities=20% Similarity=0.303 Sum_probs=81.2
Q ss_pred CCceeeeecccccCC--CCCcccccceeeee-cCCCCe----EEeeeccC--CCCcccceeeeccCCHH-hhcCCCCHHH
Q 025404 134 GPKAVAMDCEMVGGG--SNGTLDLCARVCLV-DEDENV----IFHTYVQP--QLPVTNYRYEVTGLTEE-DIKNAMPLKE 203 (253)
Q Consensus 134 ~~~~~~~dcE~~g~~--~~~~~~ll~~v~iv-~~~~~~----~~~~~v~P--~~~i~~~~~~~~Git~~-~l~~~~~~~~ 203 (253)
...++++|+||+|.. .+.++++ +.+.+. +.+|.+ .+..+|+| ..+++++.++++|||++ ++.+++++.+
T Consensus 36 ~~~~vviD~ETTGl~~~~~~IieI-gav~~~~~~~g~i~~~~~f~~~v~P~~~~~i~~~~~~i~GIt~e~~v~~~~~~~~ 114 (235)
T 3v9w_A 36 GFYPVVIDVETAGFNAKTDALLEI-AAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSGYE 114 (235)
T ss_dssp TEEEEEEEEEESSSCTTTBCEEEE-EEEEEEECTTSCEEEEEEEEEEBCCCTTCBCCHHHHHHHCCCTTCGGGCCBCHHH
T ss_pred CCcEEEEEEeCCCCCCCCCeEEEE-EEEEEEEcCCCcccccceEEEEECCCCCCCCCHHHHHHhCCCHHHHHhcCCCHHH
Confidence 446899999999975 3455665 666652 235664 57888999 56899999999999999 8999999999
Q ss_pred HHHHHHHHHhcCCCCCcccccCCCCeEEEeechhhhhhhhcCC
Q 025404 204 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMN 246 (253)
Q Consensus 204 v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~~~ 246 (253)
++.++.+++.+- +......+.+|||||+.||+.||+..
T Consensus 115 vl~~~~~~l~~~-----~~~~~~~~~~lVahN~~fD~~~L~~~ 152 (235)
T 3v9w_A 115 ALHEIFKVVRKG-----IKASGCNRAIMVAHNANFDHSFMMAA 152 (235)
T ss_dssp HHHHHHHHHHHH-----HTTTTCCEEEEEETTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hhhccCCCcEEEEeChHHHHHHHHHH
Confidence 999999999210 00000036799999999999999654
No 53
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=99.38 E-value=5.4e-13 Score=93.58 Aligned_cols=79 Identities=16% Similarity=0.280 Sum_probs=68.2
Q ss_pred CCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCCCC---c
Q 025404 39 HSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---F 109 (253)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C 109 (253)
..++++ .|..|++.|.+...|..|+ +++|. |..|++.|.+...|..|+++|++++||. |
T Consensus 12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C 79 (106)
T 2ee8_A 12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYT------------CDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79 (106)
T ss_dssp CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCB------------CSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSS
T ss_pred cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcC------------CCCccchhCCHHHHHHHHHHhCCCCCeECCCc
Confidence 344566 9999999999999999998 45665 5667788899999999999999999997 8
Q ss_pred cccCccchhhhhhccccccc
Q 025404 110 EKTLSNAESQKKISGAIDEK 129 (253)
Q Consensus 110 ~~~f~~~~~l~~h~~~~~~~ 129 (253)
++.|.+...|..|+..+.+.
T Consensus 80 ~~~f~~~~~L~~H~~~H~~~ 99 (106)
T 2ee8_A 80 GKGFCQSRTLAVHKTLHMQT 99 (106)
T ss_dssp CCCCSSHHHHHHHHHHTTSC
T ss_pred CCcccCHHHHHHHHHHhCCC
Confidence 99999999999999877653
No 54
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.37 E-value=5e-13 Score=87.57 Aligned_cols=64 Identities=30% Similarity=0.562 Sum_probs=51.0
Q ss_pred CCCCCCcccccccccccCCHHHHHHhhhhcCCCCCccccccccccccCHHHHhhhhCCCCCCCcCCcccccccccccccc
Q 025404 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNI 87 (253)
Q Consensus 8 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~k~ 87 (253)
...++++|+|+.|++.|.....|..|+++ |+++++ |. |..|++.
T Consensus 11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~--H~~~~~----------------------~~------------C~~C~k~ 54 (74)
T 2lce_A 11 MTHSDKPYKCDRCQASFRYKGNLASHKTV--HTGEKP----------------------YR------------CNICGAQ 54 (74)
T ss_dssp CCCCCCSBCCTTSSCCBSCHHHHHHHHHH--HCCCCS----------------------EE------------CTTTCCE
T ss_pred ccCCCCCeECCCCCceeCCHHHHHHHHHH--cCCCCC----------------------EE------------CCCCCch
Confidence 45678999999999999999999999999 876544 33 4445666
Q ss_pred cCChHHHHHHHHHccCCCCC
Q 025404 88 FDSPSSLIKHKEACSLSAPV 107 (253)
Q Consensus 88 f~~~~~l~~H~~~h~~~~~~ 107 (253)
|.+.+.|..|+++|++++||
T Consensus 55 f~~~~~L~~H~~~H~~~kp~ 74 (74)
T 2lce_A 55 FNRPANLKTHTRIHSGEKPY 74 (74)
T ss_dssp ESCHHHHHHHHHHHCCSCCC
T ss_pred hCCHHHHHHHHHhcCCCCCC
Confidence 77777888888888888876
No 55
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=99.36 E-value=2.9e-13 Score=91.98 Aligned_cols=75 Identities=20% Similarity=0.472 Sum_probs=65.1
Q ss_pred Ccc-ccc--cccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCCCC---cc
Q 025404 42 HQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FE 110 (253)
Q Consensus 42 ~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C~ 110 (253)
+++ .|. .|++.|.+...|..|+ .++|. |..|++.|.+...|..|+++|++++||. |+
T Consensus 2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~ 69 (90)
T 1a1h_A 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQ------------CRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69 (90)
T ss_dssp -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEE------------CTTTCCEESCHHHHHHHHHHHHCCCCEECTTTC
T ss_pred CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCcc------------CCCCCcccCCHHHHHHHHHHcCCCCCccCCCCC
Confidence 566 897 6999999999999998 45555 5667888999999999999999999996 89
Q ss_pred ccCccchhhhhhcccccc
Q 025404 111 KTLSNAESQKKISGAIDE 128 (253)
Q Consensus 111 ~~f~~~~~l~~h~~~~~~ 128 (253)
+.|...+.|..|+..+.+
T Consensus 70 ~~f~~~~~l~~H~~~H~~ 87 (90)
T 1a1h_A 70 RKFARSDERKRHTKIHLR 87 (90)
T ss_dssp CEESSHHHHHHHHGGGGC
T ss_pred chhCCHHHHHHHHHHhcc
Confidence 999999999999987754
No 56
>2qxf_A Exodeoxyribonuclease I; alpha-beta domain, DNAQ superfamily, SH3-like domain, produc structure, DNA damage, DNA repair, exonuclease; HET: TMP; 1.50A {Escherichia coli} SCOP: c.55.3.5 PDB: 1fxx_A* 3c94_A 3c95_A 3hl8_A* 3hp9_A*
Probab=99.36 E-value=2.9e-13 Score=118.86 Aligned_cols=97 Identities=18% Similarity=0.190 Sum_probs=79.6
Q ss_pred CCceeeeecccccCCC--CCcccccceeeeecCCCCeE---EeeeccCCCCc--ccceeeeccCCHHhhcCCCC-HHHHH
Q 025404 134 GPKAVAMDCEMVGGGS--NGTLDLCARVCLVDEDENVI---FHTYVQPQLPV--TNYRYEVTGLTEEDIKNAMP-LKEVK 205 (253)
Q Consensus 134 ~~~~~~~dcE~~g~~~--~~~~~ll~~v~iv~~~~~~~---~~~~v~P~~~i--~~~~~~~~Git~~~l~~~~~-~~~v~ 205 (253)
...++++|+||+|... +.++++ +.|.+ +.+|.++ ++.+|+|..++ .+..+.+||||+++|.+++. +.+|+
T Consensus 8 ~~~~vv~DlETTGl~p~~d~IIEI-gaV~v-d~~g~ii~~~f~~lVkP~~~ilp~p~a~~IhGIT~e~l~~ap~~~~evl 85 (482)
T 2qxf_A 8 QSTFLFHDYETFGTHPALDRPAQF-AAIRT-DSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFA 85 (482)
T ss_dssp CCEEEEEEEEESSSCTTTSCEEEE-EEEEE-CTTSCBCSCCEEEEBCCCTTCCCCHHHHHHHCCCHHHHHHHCBCHHHHH
T ss_pred CCCEEEEEEECCCCCCCCCeEEEE-EEEEE-ECCCeEEeeeeEEEECCCCCCCCCHHHHHHhCCCHHHHhcCCCCHHHHH
Confidence 4568999999999763 456666 66654 4466664 99999999887 56788999999999997665 49999
Q ss_pred HHHHHHHhcCCCCCcccccCCC--CeEEEeec-hhhhhhhhcCC
Q 025404 206 DKILEILNNGESTGRLMLDDGK--ARLLVGHG-LEHDLDSLRMN 246 (253)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~~~--~~~lv~h~-~~~D~~~l~~~ 246 (253)
.+|.+++ . +.+||||| +.||+.||+..
T Consensus 86 ~~f~~~l--------------~~~~~~lVaHNs~~FD~~fL~~~ 115 (482)
T 2qxf_A 86 ARIHSLF--------------TVPKTCILGYNNVRFDDEVTRNI 115 (482)
T ss_dssp HHHHHHH--------------TSTTEEEEESSTTTTHHHHHHHH
T ss_pred HHHHHHH--------------cCCCCEEEEECCHHHHHHHHHHH
Confidence 9999999 5 88999999 99999999754
No 57
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.36 E-value=6.6e-13 Score=89.29 Aligned_cols=53 Identities=25% Similarity=0.419 Sum_probs=46.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (253)
..+.++|.|+.|++.|.....|..|+++ |++++| .|+.|++.|.+.++|.+|+
T Consensus 23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~--H~~~k~~~C~~C~k~F~~~~~L~~H~ 76 (85)
T 2lv2_A 23 SASAECHLCPVCGESFASKGAQERHLRL--LHAAQVFPCKYCPATFYSSPGLTRHI 76 (85)
T ss_dssp CCCCTTEECTTSCCEESSHHHHHHHHHT--TSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred CCCCCCEECCCCCCCcCcHHHHhhhhhh--ccCCCccCCCCCCCEeCCHHHHHHhC
Confidence 3467899999999999999999999999 999888 8888888888888888886
No 58
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=99.35 E-value=2.3e-13 Score=90.73 Aligned_cols=71 Identities=27% Similarity=0.400 Sum_probs=62.9
Q ss_pred ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCCCC---ccccCccc
Q 025404 45 KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNA 116 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C~~~f~~~ 116 (253)
.|..|++.|.+...|..|+ +++|. |+.|++.|.+...|..|+++|++++||. |++.|.+.
T Consensus 3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 70 (82)
T 2kmk_A 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYP------------CQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQS 70 (82)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHTCCCEE------------CSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSH
T ss_pred cCCCCcccccCchhHHHHHHHcCCCCCee------------CCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCCh
Confidence 7999999999999999998 45665 5667888899999999999999999997 99999999
Q ss_pred hhhhhhccccc
Q 025404 117 ESQKKISGAID 127 (253)
Q Consensus 117 ~~l~~h~~~~~ 127 (253)
+.|..|++.+.
T Consensus 71 ~~l~~H~~~H~ 81 (82)
T 2kmk_A 71 SNLITHSRKHT 81 (82)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhC
Confidence 99999986553
No 59
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.35 E-value=2.2e-13 Score=96.33 Aligned_cols=76 Identities=18% Similarity=0.273 Sum_probs=67.7
Q ss_pred CCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCCCC---c
Q 025404 39 HSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---F 109 (253)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C 109 (253)
|+++++ .| .|++.|.+...|..|+ +++|. |..|++.|.+...|..|+++|+++++|. |
T Consensus 5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C 71 (110)
T 2csh_A 5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYG------------CGVCGKKFKMKHHLVGHMKIHTGIKPYECNIC 71 (110)
T ss_dssp CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEE------------CTTTSCEESSSHHHHHHHTTTCCCCCEECSSS
T ss_pred CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCcc------------CCCCCcccCCHHHHHHHHHHcCCCCCeeCCCC
Confidence 899999 99 9999999999999998 34554 5668888999999999999999999996 8
Q ss_pred cccCccchhhhhhccccc
Q 025404 110 EKTLSNAESQKKISGAID 127 (253)
Q Consensus 110 ~~~f~~~~~l~~h~~~~~ 127 (253)
++.|.....|..|++.+.
T Consensus 72 ~~~f~~~~~l~~H~~~~~ 89 (110)
T 2csh_A 72 AKRFMWRDSFHRHVTSCT 89 (110)
T ss_dssp CCEESCHHHHHHHHHHHH
T ss_pred cchhcCHHHHHHHHHHcc
Confidence 999999999999997654
No 60
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.34 E-value=1.3e-12 Score=87.92 Aligned_cols=65 Identities=20% Similarity=0.433 Sum_probs=35.5
Q ss_pred HHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----C----CCCCCCcCCcccccccccccccccCChHHHHHHHHH
Q 025404 31 IEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----T----GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA 100 (253)
Q Consensus 31 ~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~----~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~ 100 (253)
..|+++ |+++++ .|..|++.|.+...|..|+ . ++|. |..|++.|.+...|..|+++
T Consensus 4 ~~H~~~--H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~------------C~~C~~~f~~~~~L~~H~~~ 69 (86)
T 1x6h_A 4 GSSGRT--HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFV------------CSKCGKTFTRRNTMARHADN 69 (86)
T ss_dssp TCCSTT--CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEE------------CSSSCCEESCHHHHHHHHHH
T ss_pred ccccce--ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceE------------CCCCCChhCCHHHHHHHHHH
Confidence 344554 555554 5555555555555555554 0 2232 44555666666666666666
Q ss_pred ccCCCCCCc
Q 025404 101 CSLSAPVPF 109 (253)
Q Consensus 101 h~~~~~~~C 109 (253)
|++++++.|
T Consensus 70 h~~~~~~~~ 78 (86)
T 1x6h_A 70 CAGPDGVEG 78 (86)
T ss_dssp CCCCCSCCC
T ss_pred ccCCCCccc
Confidence 666666653
No 61
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=99.34 E-value=4.6e-13 Score=82.94 Aligned_cols=51 Identities=31% Similarity=0.587 Sum_probs=41.1
Q ss_pred CCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh
Q 025404 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (253)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (253)
|++||+|+.|++.|.....|..|+++ |+++++ .|+.|++.|.+.+.|..|+
T Consensus 1 g~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 52 (57)
T 3uk3_C 1 GSSSRECSYCGKFFRSNYYLNIHLRT--HTGEKPYKCEFCEYAAAQKTSLRYHL 52 (57)
T ss_dssp ----CBCTTTCCBCSCHHHHHHHHHH--HHCCCCEECSSSSCEESSHHHHHHHH
T ss_pred CCCCccCCCCcchhCChHHHHHHHHH--cCCCCCcCCCCCcchhCCHHHHHHHH
Confidence 57899999999999999999999999 888887 7877777777777777775
No 62
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.33 E-value=1e-12 Score=90.24 Aligned_cols=77 Identities=21% Similarity=0.300 Sum_probs=66.2
Q ss_pred CCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCC--CCCC--
Q 025404 39 HSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLS--APVP-- 108 (253)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~--~~~~-- 108 (253)
.+++++ .|..|++.|.+...|..|+ +++|. |+.|++.|.+...|..|+++|+++ +||.
T Consensus 2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~ 69 (95)
T 2yt9_A 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYS------------CPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69 (95)
T ss_dssp CCCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEE------------CSSSCCEESCHHHHHHHHHHHCCCCCSSBCCS
T ss_pred CCCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCc------------CCCCCCccCCHHHHHHHHHHhcCCCCCceECC
Confidence 356777 9999999999999999998 34554 667888999999999999999997 8886
Q ss_pred -ccccCccchhhhhhcc-ccc
Q 025404 109 -FEKTLSNAESQKKISG-AID 127 (253)
Q Consensus 109 -C~~~f~~~~~l~~h~~-~~~ 127 (253)
|++.|.....|..|++ .|.
T Consensus 70 ~C~~~f~~~~~L~~H~~~~H~ 90 (95)
T 2yt9_A 70 SCGKGFSRPDHLNGHIKQVHS 90 (95)
T ss_dssp SSCCCBSSHHHHHHHHHHTSC
T ss_pred CccchhCCHHHHHHHHHHhcC
Confidence 9999999999999985 444
No 63
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.32 E-value=1.6e-12 Score=84.14 Aligned_cols=49 Identities=31% Similarity=0.478 Sum_probs=36.2
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHH
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESL 59 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l 59 (253)
.++++||+|+.|++.|.....|..|+++ |+++++ .|+.|++.|.+...|
T Consensus 4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C~~~f~~~~~L 53 (70)
T 1x5w_A 4 GSSGHPEKCSECSYSCSSKAALRIHERI--HCTDRPFKCNYCSFDTKQPSNL 53 (70)
T ss_dssp CCCCCSEECSSSSCEESSHHHHHHHHGG--GCCSCSEECSSSSCEESSHHHH
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCEeCCCCCCccCCHHHH
Confidence 4578999999999999999999999999 877655 444444444333333
No 64
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.32 E-value=6.7e-13 Score=89.33 Aligned_cols=66 Identities=18% Similarity=0.266 Sum_probs=57.9
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCC----cc-ccccccccccCHHHHhhhh-----CCCCCCCcCCccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH----QP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIF 76 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~----~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f 76 (253)
-++++||.|+.|++.|.....|..|++. |.+. ++ .|..|++.|.+...|..|+ +.++.|..|+..|
T Consensus 10 H~~~k~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~ 85 (86)
T 1x6h_A 10 HTGEKPYACSHCDKTFRQKQLLDMHFKR--YHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85 (86)
T ss_dssp CCCCCCEECSSSSCEESSHHHHHHHHHH--TTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred ecCCCCCcCCCCCCccCCHHHHHHHHHH--hcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence 3578999999999999999999999988 5443 56 9999999999999999998 6788898888765
No 65
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=2.5e-13 Score=94.18 Aligned_cols=71 Identities=18% Similarity=0.332 Sum_probs=56.7
Q ss_pred cCCHHHHHHhhhhcCCCCCcc-cccccccccc-CHHHHhhhh------CCCCCCCcCCcccccccccccccccCChHHHH
Q 025404 24 FKRKDHLIEHMKISYHSVHQP-KCAVCQKLSK-SFESLREHL------TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLI 95 (253)
Q Consensus 24 f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~-~~~~l~~H~------~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~ 95 (253)
+.....+..|+++ |+++++ .|+.|++.|. +...|..|+ +++|. |..|++.|.+...|.
T Consensus 6 ~~~~~~~~~h~~~--h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~------------C~~C~k~F~~~~~L~ 71 (98)
T 2gqj_A 6 SGPGGPEEQWQRA--IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALK------------CQHCRKQFKSKAGLN 71 (98)
T ss_dssp CCCCCSCSHHHHT--TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHS------------CSSSCCCCSCHHHHH
T ss_pred CCCCCcHHHHHHH--hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEE------------CCCCCCccCCHHHHH
Confidence 3444556678888 888888 8888888888 888888887 23565 566778889999999
Q ss_pred HHHHHccCCCCCC
Q 025404 96 KHKEACSLSAPVP 108 (253)
Q Consensus 96 ~H~~~h~~~~~~~ 108 (253)
.|+++|++++|..
T Consensus 72 ~H~~~h~~~kp~~ 84 (98)
T 2gqj_A 72 YHTMAEHSAKPSD 84 (98)
T ss_dssp HHHHHHSCSCSSC
T ss_pred HHHHHHcCCCCCC
Confidence 9999999999864
No 66
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=99.31 E-value=3.3e-13 Score=98.21 Aligned_cols=104 Identities=13% Similarity=0.058 Sum_probs=71.6
Q ss_pred CCCCCCcccccccc--cccCCHHHHHHhhhhcCCCCCcc-cccccccccc------CHHHHhhhh----CCCCCCCcCCc
Q 025404 8 PKRSTARHKCVACY--KQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSK------SFESLREHL----TGPLSKAHCSG 74 (253)
Q Consensus 8 ~~~~~k~~~C~~C~--k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~------~~~~l~~H~----~~~~~C~~C~~ 74 (253)
..+|.|+|.|..++ ..|.....+..|.. ...++. .|+.|++.|. ..+.|..|+ ++||.|
T Consensus 6 ~~~~~k~~~~~~k~~~~~~s~ee~~~~~~l---~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C----- 77 (129)
T 2wbt_A 6 VDSGSKKYLSNHKGIFIHVTLEELKRYHQL---TPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVC----- 77 (129)
T ss_dssp CCTTCCGGGGCSSCEEEECCHHHHHHHTTS---CHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEEC-----
T ss_pred hcccccccccccCCeeeeecHHhhhccccC---ChhhCcccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeEC-----
Confidence 35688899886554 33443333333332 223344 7877776665 667777776 567764
Q ss_pred ccccccccccccccCChHHHHHHHHHccCCCCCC---ccccCccchhhhhhcccccc
Q 025404 75 IFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAIDE 128 (253)
Q Consensus 75 ~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C~~~f~~~~~l~~h~~~~~~ 128 (253)
+.||+.|...+.|..|+++| ++||. |++.|...+.|..|+..+++
T Consensus 78 -------~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~ 125 (129)
T 2wbt_A 78 -------PLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHN 125 (129)
T ss_dssp -------TTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred -------CCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence 55777888889999999998 88886 88889999999999876654
No 67
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.29 E-value=1.4e-12 Score=86.01 Aligned_cols=49 Identities=18% Similarity=0.249 Sum_probs=43.7
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCC---ccccCccchhhhhhccccccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAIDEK 129 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C~~~f~~~~~l~~h~~~~~~~ 129 (253)
|+.|++.|.....|..|+++|++++||. |++.|.....|..|+..+.+.
T Consensus 21 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~ 72 (77)
T 2cot_A 21 CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS 72 (77)
T ss_dssp CSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCC
Confidence 5678888999999999999999999996 899999999999999777653
No 68
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.29 E-value=2.2e-12 Score=89.01 Aligned_cols=73 Identities=16% Similarity=0.287 Sum_probs=60.9
Q ss_pred cccCCHHHHHHhhhhcCCCCCcc-ccccccccc-cCHHHHhhhh----CCCCCCCcCCcccccccccccccccCChHHHH
Q 025404 22 KQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLS-KSFESLREHL----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLI 95 (253)
Q Consensus 22 k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f-~~~~~l~~H~----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~ 95 (253)
..|.....|..|++. |.++++ .|+.|++.| .+.++|..|+ +++|. |.+|++.|.+.+.|+
T Consensus 14 ~~~~~~~~~~~~~~~--~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~------------C~~Cgk~F~~~~~L~ 79 (96)
T 2ctd_A 14 PVYAAGSLEEQWYLE--IVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFT------------CHHCGKQLRSLAGMK 79 (96)
T ss_dssp CSSCTTCHHHHHHHH--HHHTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCC------------CSSSCCCCSSHHHHH
T ss_pred CCCCCchHHHHHHHH--hcCCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeE------------CCCCCCeeCCHHHHH
Confidence 356777889999999 888888 999999999 9999999998 45665 566788889999999
Q ss_pred HH-HHHccCCCCCC
Q 025404 96 KH-KEACSLSAPVP 108 (253)
Q Consensus 96 ~H-~~~h~~~~~~~ 108 (253)
.| +++|+++..++
T Consensus 80 ~H~~~~H~~~p~~~ 93 (96)
T 2ctd_A 80 YHVMANHNSLPSGP 93 (96)
T ss_dssp HHHHHHTCCCSSCS
T ss_pred HHhHHhcCCCCCCC
Confidence 99 89998765444
No 69
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.27 E-value=3.1e-12 Score=83.72 Aligned_cols=49 Identities=16% Similarity=0.270 Sum_probs=43.8
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCC---ccccCccchhhhhhccccccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAIDEK 129 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C~~~f~~~~~l~~h~~~~~~~ 129 (253)
|..|++.|.+.+.|..|+++|++++||. |++.|.....|..|+..+.+.
T Consensus 20 C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~ 71 (74)
T 2lce_A 20 CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE 71 (74)
T ss_dssp CTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCS
T ss_pred CCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCC
Confidence 5678888999999999999999999997 899999999999999777653
No 70
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.27 E-value=4.6e-12 Score=82.45 Aligned_cols=52 Identities=31% Similarity=0.594 Sum_probs=36.3
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhh
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH 62 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H 62 (253)
-++++||+|+.|++.|.....|..|+++ |.++++ .|+.|++.|.+...|..|
T Consensus 9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--h~~~~~~~C~~C~~~f~~~~~L~~H 61 (72)
T 1x6e_A 9 HSGEKPYGCVECGKAFSRSSILVQHQRV--HTGEKPYKCLECGKAFSQNSGLINH 61 (72)
T ss_dssp TTTCCCEECSSSCCEESSHHHHHHHHHG--GGCSCCEECSSSCCEESSHHHHHHH
T ss_pred cCCCCCccCCCCCCccCCHHHHHHHHHh--cCCCCCeECCCCCcccCCHHHHHHH
Confidence 4578899999999999999999999988 777655 554444444444444333
No 71
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=99.26 E-value=4e-12 Score=79.51 Aligned_cols=49 Identities=27% Similarity=0.631 Sum_probs=44.4
Q ss_pred CcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh
Q 025404 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (253)
+||.|+.|++.|.....|..|+++ |+++++ .|+.|++.|.+.+.|..|+
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 50 (60)
T 2adr_A 1 RSFVCEVCTRAFARQEHLKRHYRS--HTNEKPYPCGLCNRAFTRRDLLIRHA 50 (60)
T ss_dssp CCBCCTTTCCCBSCHHHHHHHHHT--TTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred CcCcCCCCccccCCHHHHHHHHHH--hCCCCCccCCCCCCccCCHHHHHHHH
Confidence 689999999999999999999999 998888 8888888888888888885
No 72
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=99.25 E-value=4.5e-12 Score=87.75 Aligned_cols=76 Identities=17% Similarity=0.273 Sum_probs=65.0
Q ss_pred Ccc-cccc--ccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCCCC---cc
Q 025404 42 HQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FE 110 (253)
Q Consensus 42 ~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C~ 110 (253)
.++ .|.. |++.|.....|..|+ +++|.|. ++.|++.|.+...|..|+++|++++||. |+
T Consensus 13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~----------~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~ 82 (100)
T 2ebt_A 13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCT----------WEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82 (100)
T ss_dssp CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECC----------SSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSC
T ss_pred CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCC----------CCCCCCccCCHHHHHHHHHHhCCCCCeECCCCc
Confidence 345 8986 999999999999998 4567653 2458899999999999999999999997 89
Q ss_pred ccCccchhhhhhccccc
Q 025404 111 KTLSNAESQKKISGAID 127 (253)
Q Consensus 111 ~~f~~~~~l~~h~~~~~ 127 (253)
+.|.....|..|++.+.
T Consensus 83 ~~f~~~~~l~~H~~~H~ 99 (100)
T 2ebt_A 83 RSFSRSDHLALHMKRHQ 99 (100)
T ss_dssp CBCSSHHHHHHHHHHHC
T ss_pred CccCCHHHHHHHHHHhC
Confidence 99999999999986653
No 73
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=99.25 E-value=3.5e-12 Score=86.35 Aligned_cols=72 Identities=18% Similarity=0.274 Sum_probs=62.6
Q ss_pred cccc--ccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCCCC---ccccCc
Q 025404 45 KCAV--CQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLS 114 (253)
Q Consensus 45 ~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C~~~f~ 114 (253)
.|.. |++.|.+...|..|+ +++|.|+ .+.|++.|.+...|..|+++|++++||. |++.|.
T Consensus 7 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~----------~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 76 (89)
T 2wbs_A 7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCD----------WDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFS 76 (89)
T ss_dssp ECCSTTTCCEESSHHHHHHHHTTSCSSCCEECC----------STTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEES
T ss_pred eCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCC----------CCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccC
Confidence 8988 999999999999998 3455542 1358899999999999999999999996 899999
Q ss_pred cchhhhhhcccc
Q 025404 115 NAESQKKISGAI 126 (253)
Q Consensus 115 ~~~~l~~h~~~~ 126 (253)
..+.|..|++.+
T Consensus 77 ~~~~l~~H~~~H 88 (89)
T 2wbs_A 77 RSDHLALHMKRH 88 (89)
T ss_dssp SHHHHHHHGGGG
T ss_pred CHHHHHHHHHhh
Confidence 999999998654
No 74
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=99.25 E-value=2.6e-12 Score=82.02 Aligned_cols=53 Identities=17% Similarity=0.397 Sum_probs=38.6
Q ss_pred CCCCcccccccccccCCHHHHHHhhhhcCC-CCCcc-ccccccccccCHHHHhhhh
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKISYH-SVHQP-KCAVCQKLSKSFESLREHL 63 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H-~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (253)
++++||.|+.|++.|.....|..|++.+ | +++++ .|+.|++.|.+.+.|..|+
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~-H~~~~~~~~C~~C~k~f~~~~~L~~H~ 60 (66)
T 2drp_A 6 EGEHTYRCKVCSRVYTHISNFCRHYVTS-HKRNVKVYPCPFCFKEFTRKDNMTAHV 60 (66)
T ss_dssp EETTEEECTTTCCEESSHHHHHHHHHHH-SSSSCCCEECTTTCCEESCHHHHHHHH
T ss_pred CCCcceECCCCcchhCCHHHHHHHHHHH-cCCCCcCeECCCCCCccCCHHHHHHHH
Confidence 4678899999999999989999998763 5 46666 6666666666666665554
No 75
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=1.4e-11 Score=84.48 Aligned_cols=69 Identities=17% Similarity=0.248 Sum_probs=53.5
Q ss_pred cccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhhCCCCCCCcCCcccccccccccccccCChH
Q 025404 14 RHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPS 92 (253)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~k~f~~~~ 92 (253)
.|.|+.|++.|.....|..|++++ |+++++ .+..|. .| .|..|++.|.+..
T Consensus 25 ~~~C~~C~k~f~~~~~L~~H~~~~-H~~~~~~~~~~c~---------------~~------------~C~~C~k~f~~~~ 76 (95)
T 2ej4_A 25 SRPKKSCDRTFSTMHELVTHVTME-HVGGPEQNNHVCY---------------WE------------ECPREGKSFKAKY 76 (95)
T ss_dssp SSSCCCCCCCCSSHHHHHHHHHHT-TTCCTTCSCCCCC---------------CT------------TCSSTTCCCSSHH
T ss_pred CCcccccccccCCHHHHHHHHHHh-ccCCCCCCcccee---------------cc------------CCCCCCcccCCHH
Confidence 366888999999988899998863 666554 333221 12 3778889999999
Q ss_pred HHHHHHHHccCCCCCCcc
Q 025404 93 SLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 93 ~l~~H~~~h~~~~~~~C~ 110 (253)
.|..|+++|++++||.|.
T Consensus 77 ~L~~H~~~H~~~k~~~C~ 94 (95)
T 2ej4_A 77 KLVNHIRVHTGEKSGPSS 94 (95)
T ss_dssp HHHHHHHHHHTCCCCSSC
T ss_pred HHHHHHHhcCCCCCCCCC
Confidence 999999999999999986
No 76
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=99.24 E-value=1.7e-12 Score=94.46 Aligned_cols=79 Identities=18% Similarity=0.219 Sum_probs=66.8
Q ss_pred CCCcccccccccccC------CHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh---CCCCCCCcCCccccccc
Q 025404 11 STARHKCVACYKQFK------RKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRG 80 (253)
Q Consensus 11 ~~k~~~C~~C~k~f~------~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~C~~C~~~f~~~~ 80 (253)
.++++.|+.|.+.|. ....|..|+ . |++++| .|+.|++.|.+.++|..|+ ++||.
T Consensus 38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~--h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~------------ 102 (129)
T 2wbt_A 38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-A--SKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV------------ 102 (129)
T ss_dssp HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-H--HHHHCSEECTTTCCEESSHHHHHHHHHHTCCCCB------------
T ss_pred hhCcccchhhhcccCCCcccCCHHHHHHHH-H--hCCCCCeECCCCCcccCCHhHHHHHHHHCCCCCC------------
Confidence 467788998887765 667777787 5 888888 9999999999999999998 46665
Q ss_pred ccccccccCChHHHHHHHHHccCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLS 104 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~ 104 (253)
|+.|++.|.+.+.|..|+++|++.
T Consensus 103 C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 103 CPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp CTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CCCCCcccCCHHHHHHHHHHHCCc
Confidence 567888999999999999999986
No 77
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=3.4e-12 Score=84.34 Aligned_cols=51 Identities=22% Similarity=0.356 Sum_probs=34.9
Q ss_pred CCCCcccccccccccCCHHHHHHhhhhcCCCC---Ccc-ccccccccccCHHHHhhh
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSV---HQP-KCAVCQKLSKSFESLREH 62 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~---~~~-~C~~C~~~f~~~~~l~~H 62 (253)
++++||+|+.|++.|.....|..|+++ |.+ +++ .|..|++.|.+...|..|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--h~~~~~~~~~~C~~C~k~f~~~~~L~~H 57 (78)
T 2d9h_A 3 SGSSGLQCEICGFTCRQKASLNWHQRK--HAETVAALRFPCEFCGKRFEKPDSVAAH 57 (78)
T ss_dssp CSCCCEECSSSCCEESSHHHHHHHHHH--HHHHTTTCCEECTTTCCEESSHHHHHHH
T ss_pred CCCcCeECCCCCCeeCCHHHHHHHHHH--hhccCCCcccCCCCCCchhCCHHHHHHH
Confidence 578999999999999999999999998 764 333 444444333333333333
No 78
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.22 E-value=7.5e-12 Score=80.91 Aligned_cols=58 Identities=33% Similarity=0.485 Sum_probs=51.0
Q ss_pred CCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCCCC
Q 025404 39 HSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (253)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~ 108 (253)
|+++++ .|+.|++.|.+...|..|+ +++|. |+.|++.|.+...|..|+++|++++|.+
T Consensus 4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~------------C~~C~~~f~~~~~L~~H~~~h~~~~p~p 67 (70)
T 1x5w_A 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFK------------CNYCSFDTKQPSNLSKHMKKFHGDMSGP 67 (70)
T ss_dssp CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEE------------CSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEe------------CCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence 788888 9999999999999999998 44554 6678889999999999999999998865
No 79
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=99.21 E-value=1e-11 Score=76.69 Aligned_cols=48 Identities=25% Similarity=0.528 Sum_probs=37.6
Q ss_pred cccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh
Q 025404 14 RHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (253)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (253)
||.|+.|++.|.....|..|+++ |+++++ .|+.|++.|.+.+.|..|+
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 49 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRT--HTDVRPYHCTYCNFSFKTKGNLTKHM 49 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH--TSSCCCEECSSSSCEESSHHHHHHHH
T ss_pred CCcCCCCcCcCCCHHHHHHHHHh--cCCCCCccCCCCCchhcCHHHHHHHH
Confidence 68999999999999999999999 888776 6666666665555555554
No 80
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=4.8e-14 Score=91.97 Aligned_cols=68 Identities=18% Similarity=0.142 Sum_probs=59.0
Q ss_pred HHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhhCCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCC
Q 025404 28 DHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAP 106 (253)
Q Consensus 28 ~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~ 106 (253)
..|..|+++ |+++++ .|+.|++.|.+.+.|.. +++|. |+.|++.|.+.+.|..|+++|++++|
T Consensus 4 ~~l~~H~~~--h~~~~~~~C~~C~k~f~~~~~l~~--~~~~~------------C~~C~~~f~~~~~l~~H~~~H~~~~~ 67 (73)
T 2ctu_A 4 GSSGKRQKI--HLGDRSQKCSKCGIIFIRRSTLSR--RKTPM------------CEKCRKDSCQEAALNKDEGNESGKKT 67 (73)
T ss_dssp CSCCCCCCC--CCCCSEEECSSSCCEEECCCCCCC--SSSCC------------CHHHHHTCSCCCSSCCCSSCCCCCCC
T ss_pred hhHHHHHHH--hCCCCCeeCCcccchhCCHHHhCc--CCCCC------------CCCCChhhcCHHHHHHHHHhhcCCCC
Confidence 457789999 999999 99999999999988876 45554 67789999999999999999999999
Q ss_pred CCccc
Q 025404 107 VPFEK 111 (253)
Q Consensus 107 ~~C~~ 111 (253)
|.|..
T Consensus 68 ~~C~~ 72 (73)
T 2ctu_A 68 SGPSS 72 (73)
T ss_dssp SSCCC
T ss_pred CCCCC
Confidence 99863
No 81
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.20 E-value=4.8e-12 Score=88.08 Aligned_cols=59 Identities=10% Similarity=0.053 Sum_probs=46.8
Q ss_pred ccccccccCChHHHHHHHH-Hc---cCCCCCC---ccccCccchhhhhh-ccccccccccCCCceeeeecccccC
Q 025404 81 CNLCMNIFDSPSSLIKHKE-AC---SLSAPVP---FEKTLSNAESQKKI-SGAIDEKRTCRGPKAVAMDCEMVGG 147 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~-~h---~~~~~~~---C~~~f~~~~~l~~h-~~~~~~~r~~~~~~~~~~dcE~~g~ 147 (253)
|+.|++.|.+.+.|..|++ +| .+++||. |++.|...+.|..| +..+.+. ..+.|..+..
T Consensus 21 C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htge--------kpy~C~~~~~ 87 (102)
T 2ghf_A 21 CKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE--------ENFKLTMVKR 87 (102)
T ss_dssp CSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTC--------CCEEEEECCC
T ss_pred CCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCC--------CCeeCCcccC
Confidence 5678888999999999998 59 5689996 99999999999999 6666542 3466766443
No 82
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=99.19 E-value=1.5e-11 Score=75.33 Aligned_cols=46 Identities=35% Similarity=0.574 Sum_probs=42.3
Q ss_pred CCCCCCcccccccccccCCHHHHHHhhh-hcCCCCCcc-ccccccccccC
Q 025404 8 PKRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQP-KCAVCQKLSKS 55 (253)
Q Consensus 8 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~H~~~~~-~C~~C~~~f~~ 55 (253)
..++++||.|+.|++.|.....|..|++ + |+++++ .|+.|++.|.+
T Consensus 6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~--H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQV--HTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp CCCSSCCEECSSSCCEESSHHHHHHHHHHT--SCCCCCCCSSSSCCSSCC
T ss_pred CCCCCCCeECCCCCcccCCHHHHHHHHHHh--cCCCCCccCCCCCCCCCC
Confidence 4668999999999999999999999997 8 999998 99999999976
No 83
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.18 E-value=9.8e-12 Score=80.85 Aligned_cols=60 Identities=28% Similarity=0.458 Sum_probs=50.8
Q ss_pred hhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCC
Q 025404 33 HMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAP 106 (253)
Q Consensus 33 H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~ 106 (253)
+.++ |+++++ .|+.|++.|.....|..|+ +++|. |+.|++.|.+...|..|+++|+++.+
T Consensus 5 ~~~~--H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~------------C~~C~~~f~~~~~L~~H~~~H~~~~~ 70 (72)
T 1x6e_A 5 SSGI--HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYK------------CLECGKAFSQNSGLINHQRIHTSGPS 70 (72)
T ss_dssp CCCT--TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEE------------CSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred CCcc--cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeE------------CCCCCcccCCHHHHHHHHHhcCCCCC
Confidence 3566 899999 9999999999999999998 45565 56678889999999999999988743
No 84
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.18 E-value=4.6e-12 Score=83.53 Aligned_cols=23 Identities=22% Similarity=0.297 Sum_probs=14.2
Q ss_pred ccccccccCChHHHHHHHHHccC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSL 103 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~ 103 (253)
|+.|++.|.+.+.|..|+++|++
T Consensus 48 C~~C~~~f~~~~~L~~H~~~~H~ 70 (77)
T 2ct1_A 48 CPHCDTVIARKSDLGVHLRKQHS 70 (77)
T ss_dssp CSSSSCEESSHHHHHHHHHHTSC
T ss_pred CCCCCCccCCHHHHHHHHHHhCC
Confidence 44455666666777777766443
No 85
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.17 E-value=1.1e-11 Score=85.42 Aligned_cols=50 Identities=22% Similarity=0.409 Sum_probs=47.5
Q ss_pred CCCccccccccccc-CCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhh-h
Q 025404 11 STARHKCVACYKQF-KRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH-L 63 (253)
Q Consensus 11 ~~k~~~C~~C~k~f-~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H-~ 63 (253)
+++||.|+.|++.| .....|..|+++ | ++++ .|.+|++.|.+.+.|..| +
T Consensus 31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~--h-~~k~~~C~~Cgk~F~~~~~L~~H~~ 83 (96)
T 2ctd_A 31 DKGSVSCPTCQAVGRKTIEGLKKHMEN--C-KQEMFTCHHCGKQLRSLAGMKYHVM 83 (96)
T ss_dssp HTSCEECTTTCSCEESSHHHHHHHHHH--H-CCCCCCCSSSCCCCSSHHHHHHHHH
T ss_pred CCCCcCCCCCCCCcccCHHHHHHHHHH--H-CCCCeECCCCCCeeCCHHHHHHHhH
Confidence 36899999999999 999999999999 9 8888 999999999999999999 6
No 86
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.17 E-value=1.9e-11 Score=80.49 Aligned_cols=53 Identities=19% Similarity=0.421 Sum_probs=48.8
Q ss_pred CCCCCcccccccccccCCHHHHHHhhh-hcCCCCC-cc-ccccccccccCHHHHhhhh
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVH-QP-KCAVCQKLSKSFESLREHL 63 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~H~~~-~~-~C~~C~~~f~~~~~l~~H~ 63 (253)
-++++||.|+.|++.|.....|..|++ . |.++ ++ .|+.|++.|.+...|..|+
T Consensus 10 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~--h~~~~~~~~C~~C~~~f~~~~~L~~H~ 65 (77)
T 2ct1_A 10 HSGEKPYECYICHARFTQSGTMKMHILQK--HTENVAKFHCPHCDTVIARKSDLGVHL 65 (77)
T ss_dssp CSCCCSEECTTTCCEESCHHHHHHHHHHH--SSSSCSSEECSSSSCEESSHHHHHHHH
T ss_pred cCCCCCeECCCcCchhCCHHHHHHHHHHh--cCCCCCccCCCCCCCccCCHHHHHHHH
Confidence 457999999999999999999999997 5 8875 67 9999999999999999998
No 87
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.15 E-value=1.6e-11 Score=84.94 Aligned_cols=52 Identities=25% Similarity=0.389 Sum_probs=49.3
Q ss_pred CCCCcccccccccccC-CHHHHHHhhhhcCCCC-Ccc-ccccccccccCHHHHhhhh
Q 025404 10 RSTARHKCVACYKQFK-RKDHLIEHMKISYHSV-HQP-KCAVCQKLSKSFESLREHL 63 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~-~~~~l~~H~~~~~H~~-~~~-~C~~C~~~f~~~~~l~~H~ 63 (253)
+++++|.|+.|++.|. ....|..|+++ |++ +++ .|..|++.|.+...|..|+
T Consensus 20 ~~~~~~~C~~C~k~f~~~~~~L~~H~~~--h~~~~~~~~C~~C~k~F~~~~~L~~H~ 74 (98)
T 2gqj_A 20 HERGEAVCPTCNVVTRKTLVGLKKHMEV--CQKLQDALKCQHCRKQFKSKAGLNYHT 74 (98)
T ss_dssp TTTSCCCCTTTCCCCSSCSHHHHHHHHH--HHHHHHHHSCSSSCCCCSCHHHHHHHH
T ss_pred ccCCCcCCCCCCCChhhhHHHHHHHHHH--HcCCCCCEECCCCCCccCCHHHHHHHH
Confidence 4689999999999999 99999999999 887 888 9999999999999999998
No 88
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.14 E-value=3.8e-11 Score=79.28 Aligned_cols=63 Identities=19% Similarity=0.253 Sum_probs=50.9
Q ss_pred CCCCcc-cccc--ccccccCHHHHhhhh------CCCCCCCcCCcccccccccc--cccccCChHHHHHHHHHccCCCCC
Q 025404 39 HSVHQP-KCAV--CQKLSKSFESLREHL------TGPLSKAHCSGIFSDRGCNL--CMNIFDSPSSLIKHKEACSLSAPV 107 (253)
Q Consensus 39 H~~~~~-~C~~--C~~~f~~~~~l~~H~------~~~~~C~~C~~~f~~~~C~~--C~k~f~~~~~l~~H~~~h~~~~~~ 107 (253)
.+++++ .|.. |++.|.+...|..|+ +++|. |+. |++.|.+.+.|..|+++|++++||
T Consensus 2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~------------C~~~~C~k~f~~~~~L~~H~~~H~~~~~~ 69 (79)
T 2dlk_A 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFS------------CPEPACGKSFNFKKHLKEHMKLHSDTRDY 69 (79)
T ss_dssp CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEE------------CSCTTTCCEESSHHHHHHHHHHHHTSCCC
T ss_pred CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeE------------CCCCCCcCccCCHHHHHHHHHHhCCCCCe
Confidence 356667 7775 999999999999997 34555 555 888999999999999999999999
Q ss_pred C---ccccC
Q 025404 108 P---FEKTL 113 (253)
Q Consensus 108 ~---C~~~f 113 (253)
. |++.|
T Consensus 70 ~C~~C~k~F 78 (79)
T 2dlk_A 70 ICEFSGPSS 78 (79)
T ss_dssp SCCSSSCCC
T ss_pred eCCCCCCCC
Confidence 7 55555
No 89
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=99.13 E-value=4e-11 Score=78.00 Aligned_cols=53 Identities=26% Similarity=0.642 Sum_probs=44.9
Q ss_pred CCCCCccccc--ccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh
Q 025404 9 KRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (253)
Q Consensus 9 ~~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (253)
..+++||.|+ .|++.|.....|..|+++ |.++++ .|+.|++.|.+.+.|..|+
T Consensus 14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 69 (73)
T 1f2i_G 14 VPKMRPYACPVESCDRRFSRSDELTRHIRI--HTGQKPFQCRICMRNFSRSDHLTTHI 69 (73)
T ss_dssp CCCCCCEECSSTTBCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred CCCCCccCCcCCCCCCccCCHHHHHHHHHh--hCCCCCeECCCCCchhCCHHHHHHHH
Confidence 4578899996 699999999999999998 888887 8888888888888888775
No 90
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=99.10 E-value=4e-11 Score=80.17 Aligned_cols=70 Identities=20% Similarity=0.181 Sum_probs=59.1
Q ss_pred cc--ccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccc--cccccCChHHHHHHHHHccC---CCCCCcccc
Q 025404 45 KC--AVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNL--CMNIFDSPSSLIKHKEACSL---SAPVPFEKT 112 (253)
Q Consensus 45 ~C--~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~--C~k~f~~~~~l~~H~~~h~~---~~~~~C~~~ 112 (253)
.| +.|++.|...+.|..|+ +++|.| +. |++.|.+...|..|+++|++ ..++.|++.
T Consensus 3 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C------------~~~~C~~~f~~~~~l~~H~~~h~~~~C~~~~~C~~~ 70 (85)
T 2j7j_A 3 VCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC------------PHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFV 70 (85)
T ss_dssp ECCSTTCCCEESSHHHHHHHHHHHHTTCCEEC------------CSTTCCCEESSHHHHHHHHHHHHSEECCSCSSCCCE
T ss_pred cCCCCCCCcccCCHHHHHHHHHHhCCCCCeeC------------CCCCCcCccCCHHHHHHHHHHhCCCCCCCCCCCCCc
Confidence 68 89999999999999998 566654 45 78889999999999999998 334449999
Q ss_pred Cccchhhhhhcccc
Q 025404 113 LSNAESQKKISGAI 126 (253)
Q Consensus 113 f~~~~~l~~h~~~~ 126 (253)
|...+.|..|++.+
T Consensus 71 f~~~~~l~~H~~~h 84 (85)
T 2j7j_A 71 GKTWTLYLKHVAEC 84 (85)
T ss_dssp ESSHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHhc
Confidence 99999999998543
No 91
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=99.10 E-value=5.3e-12 Score=85.45 Aligned_cols=72 Identities=19% Similarity=0.491 Sum_probs=61.0
Q ss_pred Ccc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCCCC---cccc
Q 025404 42 HQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKT 112 (253)
Q Consensus 42 ~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C~~~ 112 (253)
++| .|+.|++.|.+.+.|..|+ +++|. |+.|++.|...+.|..|+++|++ .++. |++.
T Consensus 1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~------------C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~ 67 (88)
T 1llm_C 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA------------CDICGRKFARSDERKRHRDIQHI-LPILEDKVEEL 67 (88)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE------------CTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHH
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCcc------------CCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHH
Confidence 356 9999999999999999998 55665 56677888999999999999985 5664 9999
Q ss_pred Cccchhhhhhcccc
Q 025404 113 LSNAESQKKISGAI 126 (253)
Q Consensus 113 f~~~~~l~~h~~~~ 126 (253)
|.....|..|+...
T Consensus 68 f~~~~~L~~H~~~~ 81 (88)
T 1llm_C 68 LSKNYHLENEVARL 81 (88)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHH
Confidence 99999999998544
No 92
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=99.08 E-value=1.1e-10 Score=69.49 Aligned_cols=42 Identities=26% Similarity=0.377 Sum_probs=39.0
Q ss_pred CCCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccc
Q 025404 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQK 51 (253)
Q Consensus 8 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~ 51 (253)
..++++||.|+.|++.|.....|..|+++ |+++++ .|++|++
T Consensus 6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C~k 48 (48)
T 2epr_A 6 SGRTRKQVACEICGKIFRDVYHLNRHKLS--HSGEKPYSSGPSSG 48 (48)
T ss_dssp CCCCCCSEEETTTTEEESSHHHHHHHGGG--SCSCCCCCSCCCCC
T ss_pred CCCCCcCeeCCCCCcccCCHHHHHHHHHh--cCCCCCccCCCCCC
Confidence 46789999999999999999999999999 999998 9999985
No 93
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=99.06 E-value=5.4e-11 Score=75.76 Aligned_cols=53 Identities=15% Similarity=0.447 Sum_probs=45.2
Q ss_pred CCCCcc-ccccccccccCHHHHhhhh-------CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccC
Q 025404 39 HSVHQP-KCAVCQKLSKSFESLREHL-------TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSL 103 (253)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-------~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~ 103 (253)
|+++++ .|+.|++.|.+.++|..|+ +++|. |+.|++.|.+.+.|..|+++|++
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~------------C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYP------------CPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEE------------CTTTCCEESCHHHHHHHHHHHTC
T ss_pred cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeE------------CCCCCCccCCHHHHHHHHHHHcC
Confidence 889999 9999999999999999997 12333 67788899999999999999875
No 94
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=99.06 E-value=1.9e-10 Score=74.50 Aligned_cols=57 Identities=23% Similarity=0.524 Sum_probs=50.2
Q ss_pred CCCCCCCCCcccccc--cccccCCHHHHHHhhhhcCCCCCcc-cccc--ccccccCHHHHhhhh
Q 025404 5 AELPKRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL 63 (253)
Q Consensus 5 ~~~~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~ 63 (253)
.....+..++|.|.. |++.|.....|..|+++ |+++++ .|.. |++.|.+...|..|+
T Consensus 8 ~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~~~C~k~f~~~~~l~~H~ 69 (72)
T 2epa_A 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT--HTGEKPFSCSWKGCERRFARSDELSRHR 69 (72)
T ss_dssp CCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHH--HSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred CCCCccccCceeCCCCCCccccCCHHHHHHHHHh--cCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence 344566789999988 99999999999999999 999998 9964 999999999999886
No 95
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.05 E-value=7.5e-11 Score=79.16 Aligned_cols=54 Identities=22% Similarity=0.387 Sum_probs=29.8
Q ss_pred CCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHH-HccCC
Q 025404 39 HSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKE-ACSLS 104 (253)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~-~h~~~ 104 (253)
++..++ .|++||+.|.+.++|.+|+ ++||. |+.|+++|.+.+.|.+|++ .|++|
T Consensus 23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~------------C~~C~k~F~~~~~L~~H~~~~H~~E 83 (85)
T 2lv2_A 23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFP------------CKYCPATFYSSPGLTRHINKCHPSE 83 (85)
T ss_dssp CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEE------------CTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccC------------CCCCCCEeCCHHHHHHhCcccCcCC
Confidence 344444 6666666666666666665 33443 3445555566666666653 45444
No 96
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.99 E-value=2.8e-10 Score=74.96 Aligned_cols=58 Identities=22% Similarity=0.430 Sum_probs=47.8
Q ss_pred CCCCcc-ccccccccccCHHHHhhhh---C-----CCCCCCcCCcccccccccccccccCChHHHHHHHH-HccCCCCCC
Q 025404 39 HSVHQP-KCAVCQKLSKSFESLREHL---T-----GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKE-ACSLSAPVP 108 (253)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~---~-----~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~-~h~~~~~~~ 108 (253)
|+++++ .|+.|++.|.+...|..|+ . ++|. |+.|++.|...+.|..|++ .|.++++..
T Consensus 2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~------------C~~C~k~f~~~~~L~~H~~~~H~~~~~~~ 69 (78)
T 2d9h_A 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFP------------CEFCGKRFEKPDSVAAHRSKSHPALLLAP 69 (78)
T ss_dssp CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEE------------CTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccC------------CCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence 889999 9999999999999999998 1 3454 6678888999999999995 566666654
No 97
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=98.98 E-value=2.3e-10 Score=70.45 Aligned_cols=46 Identities=30% Similarity=0.495 Sum_probs=26.0
Q ss_pred ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHcc
Q 025404 45 KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACS 102 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~ 102 (253)
.|+.|++.|.+.+.|..|+ +++|. |+.|++.|.+.+.|..|+++|+
T Consensus 6 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 6 ECSYCGKFFRSNYYLNIHLRTHTGEKPYK------------CEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp BCTTTCCBCSCHHHHHHHHHHHHCCCCEE------------CSSSSCEESSHHHHHHHHHHHC
T ss_pred cCCCCcchhCChHHHHHHHHHcCCCCCcC------------CCCCcchhCCHHHHHHHHHHhc
Confidence 5666666666666666665 33443 3344555556666666666554
No 98
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=98.97 E-value=2.8e-10 Score=70.05 Aligned_cols=49 Identities=27% Similarity=0.501 Sum_probs=26.4
Q ss_pred ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCC
Q 025404 45 KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
.|+.|++.|.+.+.|..|+ +++|. |+.|++.|.+.+.|..|+++|++++
T Consensus 3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~k 56 (57)
T 1bbo_A 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYH------------CTYCNFSFKTKGNLTKHMKSKAHSK 56 (57)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHTSSCCCEE------------CSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred cCCCCcCcCCCHHHHHHHHHhcCCCCCcc------------CCCCCchhcCHHHHHHHHHHhcccC
Confidence 4556666666666666655 23333 3444555555566666666555543
No 99
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.95 E-value=5.2e-10 Score=65.43 Aligned_cols=40 Identities=23% Similarity=0.336 Sum_probs=37.2
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQ 50 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~ 50 (253)
.++++||+|+.|++.|.....|..|+++ |+++++ .|+.||
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~~~~~C~~cg 45 (45)
T 2epq_A 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRS--HDGSVGKSGPSSG 45 (45)
T ss_dssp CSSCCSSEETTTTEECSCHHHHHHHHHH--HSCCCCCCCCCCC
T ss_pred cCCCCCCcCCCCCcccCCHHHHHHHHHH--ccCCCCCCCcCCC
Confidence 5689999999999999999999999999 999988 999886
No 100
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=2.4e-10 Score=72.82 Aligned_cols=51 Identities=25% Similarity=0.431 Sum_probs=37.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc-cccccccCHHHHhhhh
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA-VCQKLSKSFESLREHL 63 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~-~C~~~f~~~~~l~~H~ 63 (253)
.-+++||+|+.|++.|. ...|..|+++ ++++| +|+ .||+.|...+.|..|+
T Consensus 5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~ 57 (66)
T 2eod_A 5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHL 57 (66)
T ss_dssp CCCCCEEECSSSCCEEE-HHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHH
T ss_pred cCCCCCeeccccCCccC-HHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHH
Confidence 34688999999999999 9999999876 45555 666 6666666666665554
No 101
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.92 E-value=8.3e-10 Score=64.83 Aligned_cols=39 Identities=28% Similarity=0.443 Sum_probs=35.3
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytn_A 7 GTGKKPYKCNECGKVFTQNSHLARHRGI--HTGEKPSGPSSG 46 (46)
T ss_dssp CSCCSSCBCTTTCCBCSSHHHHHHHGGG--TSCCCCCSCCCC
T ss_pred CCCCcCeECCCCCCeeCCHHHHHHHhhh--cCCCCCCCCCCC
Confidence 4578999999999999999999999999 999888 88877
No 102
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.92 E-value=8.2e-10 Score=64.88 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=35.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|++|
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2elz_A 7 GSVEKPYKCEDCGKGYNRRLNLDMHQRV--HMGEKTSGPSSG 46 (46)
T ss_dssp CCCCSSCBCSSSCCBCSSHHHHHHHGGG--GGSCCCCCSCCC
T ss_pred CCCCCCeeCcccCchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 4588999999999999999999999999 999888 88877
No 103
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=98.91 E-value=8.3e-10 Score=64.79 Aligned_cols=39 Identities=26% Similarity=0.380 Sum_probs=35.2
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|...+.|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2el4_A 7 GTGVKPYGCSQCAKTFSLKSQLIVHQRS--HTGVKPSGPSSG 46 (46)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHGGG--SSSCCCSCCTTC
T ss_pred CCCCCceECCCCCchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3578999999999999999999999999 999888 88877
No 104
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.91 E-value=8e-10 Score=64.92 Aligned_cols=39 Identities=31% Similarity=0.484 Sum_probs=35.2
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2emf_A 7 GTGGKHFECTECGKAFTRKSTLSMHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSSSCCEECSSSCCEESCHHHHHHHGGG--TSCSSCSCCCCC
T ss_pred cCCCCCeECCCCCchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4578999999999999999999999999 999888 88876
No 105
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=98.91 E-value=9e-10 Score=64.67 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=35.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em0_A 7 GMGEKTWKCRECDMCFSQASSLRLHQNV--HVGEKPSGPSSG 46 (46)
T ss_dssp SCCCCCCCCSSSCCCCSSHHHHHHHGGG--GSSSSCSCSSCC
T ss_pred cCCCcCeECCCCCcccCCHHHHHHHHHH--cCCCCCcCCCCC
Confidence 3578999999999999999999999999 999888 88876
No 106
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.90 E-value=1.5e-09 Score=63.76 Aligned_cols=39 Identities=31% Similarity=0.423 Sum_probs=35.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytq_A 7 GAGEKPYGCSECGKAFSSKSYLIIHMRT--HSGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSCBCSSSCCBCSCHHHHHHHHTT--TCCSCSSCCCCC
T ss_pred cCCCCCcCCCccChhhCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 4588999999999999999999999999 999888 88877
No 107
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=98.90 E-value=4.5e-10 Score=72.89 Aligned_cols=62 Identities=19% Similarity=0.492 Sum_probs=43.5
Q ss_pred HHHHHhhhhcCCCCCcc-ccc--cccccccCHHHHhhhh-----CCCCCCCcCCcccccccccccccccCChHHHHHHHH
Q 025404 28 DHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKE 99 (253)
Q Consensus 28 ~~l~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~ 99 (253)
..|..|.+.. |+++++ .|+ .|++.|.+...|..|+ +++|. |+.|++.|.+.+.|..|++
T Consensus 4 ~~~~~~~~~~-~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 4 HPMNNLLNYV-VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQ------------CRICMRNFSRSDHLTTHIR 70 (73)
T ss_dssp ----CTTSCC-CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEE------------CTTTCCEESCHHHHHHHHT
T ss_pred CCccchhhcc-CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeE------------CCCCCchhCCHHHHHHHHH
Confidence 3455555543 778888 886 5888888888888887 45555 4567778888888888888
Q ss_pred Hcc
Q 025404 100 ACS 102 (253)
Q Consensus 100 ~h~ 102 (253)
+|+
T Consensus 71 ~Ht 73 (73)
T 1f2i_G 71 THT 73 (73)
T ss_dssp TCC
T ss_pred hcC
Confidence 774
No 108
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=98.90 E-value=8.3e-10 Score=64.86 Aligned_cols=39 Identities=26% Similarity=0.512 Sum_probs=34.8
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ +|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emk_A 7 GTGEKPYECKECGKAFSQTTHLIQHQRV--HTGEKPSGPSSG 46 (46)
T ss_dssp CSSSCSCBCSSSCCBCSCHHHHHHHHHH--HSSCCCSSCCCC
T ss_pred cCCCCceECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3578999999999999999999999999 998888 88876
No 109
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=8.7e-10 Score=64.73 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=35.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|...+.|..|+++ |+++++ .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ene_A 7 GTGEKPYKCNECGKVFRHNSYLSRHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCSSSEECSSSCCEESSHHHHHHHHTT--TCCCCCCSCCCC
T ss_pred CCCCCCeECCCCCchhCChHHHHHHHhh--cCCCCCCCCCCC
Confidence 4578999999999999999999999999 999888 88877
No 110
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=1e-09 Score=64.36 Aligned_cols=39 Identities=28% Similarity=0.482 Sum_probs=34.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2eop_A 7 GTGEKPHECRECGKSFSFNSQLIVHQRI--HTGENPSGPSSG 46 (46)
T ss_dssp CCCCCSCBCTTTCCBCSSHHHHHHHHTT--TTTSCCSCCCCC
T ss_pred cCCCCCeeCCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3578999999999999999999999999 999888 88876
No 111
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=9.4e-10 Score=64.55 Aligned_cols=39 Identities=28% Similarity=0.463 Sum_probs=34.9
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|+.|
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eoe_A 7 GTGEKPYKCNECGKVFTQNSHLANHQRI--HTGVKPSGPSSG 46 (46)
T ss_dssp CCCCCSSEETTTTEECSSHHHHHHHHGG--GSCCCSCSSCCC
T ss_pred CCCCCCeECCCcChhhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3578999999999999999999999999 999888 88877
No 112
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=8.7e-10 Score=64.73 Aligned_cols=39 Identities=31% Similarity=0.490 Sum_probs=34.9
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2eq0_A 7 GTGEKPYKCHECGKVFRRNSHLARHQLI--HTGEKPSGPSSG 46 (46)
T ss_dssp TTCCCCEECTTTCCEESSHHHHHHHHTT--TCCCCCSCCSCC
T ss_pred CCCCCCeECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3578999999999999999999999999 999888 88876
No 113
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=1.7e-09 Score=63.50 Aligned_cols=39 Identities=23% Similarity=0.399 Sum_probs=35.1
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ +|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2epz_A 7 GTGEKPFDCIDCGKAFSDHIGLNQHRRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSBCCTTTCCCBSSHHHHHHHHTT--TTTCCCCSSCCC
T ss_pred cCCCCCeECCCCCceeCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4578999999999999999999999999 999888 88876
No 114
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=9.6e-10 Score=64.55 Aligned_cols=39 Identities=23% Similarity=0.339 Sum_probs=35.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2enc_A 7 GSGEKPFKCEECGKGFYTNSQCYSHQRS--HSGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHH--SCCSSCCSSCCC
T ss_pred CCCCCCcCCCCCCCcCCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 4578999999999999999999999999 999988 88877
No 115
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=7.2e-10 Score=64.43 Aligned_cols=39 Identities=23% Similarity=0.414 Sum_probs=35.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|...+.|..|+++ |+++++ .|+.|
T Consensus 5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 44 (44)
T 2emx_A 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQT--HAEEKPSGPSSG 44 (44)
T ss_dssp CSSCCCEECSSSSCEESSHHHHHHHHHH--HTSSCSCSCCCC
T ss_pred cCCCcCccCCCCCcccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3578999999999999999999999999 999888 88876
No 116
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=9.2e-10 Score=64.63 Aligned_cols=39 Identities=26% Similarity=0.423 Sum_probs=34.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eml_A 7 GTGEKPYECSVCGKAFSHRQSLSVHQRI--HSGKKPSGPSSG 46 (46)
T ss_dssp CSSCCSEECSSSCCEESSHHHHHHHHGG--GSSCCCSCSSCC
T ss_pred cCCCCCeeCCCcCCccCCHHHHHHHHHH--hcCCCCCCCCCC
Confidence 3578999999999999999999999999 998888 88876
No 117
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=1.6e-09 Score=63.54 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=35.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2em7_A 7 GTGEKPYKCEECGKGFICRRDLYTHHMV--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESCHHHHHHHGGG--GTTCCCSSTTCC
T ss_pred CCCCcCccCCCccchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4578999999999999999999999999 999888 88877
No 118
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=1e-09 Score=64.40 Aligned_cols=39 Identities=23% Similarity=0.389 Sum_probs=34.9
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2eoq_A 7 GTGEKPFKCDICGKSFCGRSRLNRHSMV--HTAEKPSGPSSG 46 (46)
T ss_dssp SSSSCSCCCSSSCCCCSSHHHHHHHHHH--TTCCCSSSCCCC
T ss_pred CCCCCCcCCCcCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3578999999999999999999999999 999888 88876
No 119
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.88 E-value=9.6e-10 Score=64.53 Aligned_cols=39 Identities=26% Similarity=0.428 Sum_probs=34.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||.|+.|++.|.....|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2ep2_A 7 GTGEKPYECSICGKSFTKKSQLHVHQQI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHHT--TSSCCSCCSCCC
T ss_pred CCCCcCcCCCCCCcccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3578999999999999999999999998 999888 88876
No 120
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.88 E-value=2e-09 Score=63.05 Aligned_cols=39 Identities=26% Similarity=0.436 Sum_probs=35.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eq4_A 7 GTGEKLYNCKECGKSFSRAPCLLKHERL--HSGEKPSGPSSG 46 (46)
T ss_dssp SSCCCCCCBTTTTBCCSCHHHHHHHHHH--CCSSSCCCCCCC
T ss_pred CCCCCCeECCCCCCccCchHHHHHHHHh--cCCCCCCCCCCC
Confidence 4578999999999999999999999999 999888 88876
No 121
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.88 E-value=1e-09 Score=64.34 Aligned_cols=39 Identities=26% Similarity=0.439 Sum_probs=34.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||.|+.|++.|.....|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ytr_A 7 GTGEKPYKCNECGKAFSQTSKLARHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CSSCCTTCCTTTCCCCSSHHHHHHHHTT--TTTCSCCCSCCC
T ss_pred CCCCcCcCCCCCCCccCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3578999999999999999999999999 998888 88877
No 122
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=98.88 E-value=9.4e-10 Score=64.58 Aligned_cols=39 Identities=33% Similarity=0.520 Sum_probs=34.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||.|+.|++.|.....|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2ema_A 7 GTGEKRYKCNECGKVFSRNSQLSQHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp CTTSCCEECSSSCCEESSHHHHHHHHTG--GGCCCCCSSSCC
T ss_pred CCCCcCcCCCCCcchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3578999999999999999999999999 888888 88876
No 123
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.88 E-value=9.5e-10 Score=64.56 Aligned_cols=39 Identities=26% Similarity=0.346 Sum_probs=35.1
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|++|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ysp_A 7 GTGEKPYKCEKCGKGYNSKFNLDMHQKV--HTGERPSGPSSG 46 (46)
T ss_dssp CSSCCSEEETTTTEEESCHHHHHHHHTT--SCSCCSSCCSCC
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHh--hCCCCCCCCCCC
Confidence 4578999999999999999999999999 999888 88877
No 124
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.88 E-value=1.1e-09 Score=64.35 Aligned_cols=39 Identities=33% Similarity=0.563 Sum_probs=34.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em5_A 7 GSSTKSHQCHECGRGFTLKSHLNQHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCSCSEECSSSCCEESSHHHHHHHHTT--TSCSCCSSCCCC
T ss_pred CCCCCCeECCcCCCccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3578999999999999999999999999 999888 88877
No 125
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=98.88 E-value=1.2e-09 Score=64.13 Aligned_cols=39 Identities=23% Similarity=0.437 Sum_probs=35.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||.|+.|++.|.....|..|+++ |+++++ +|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em9_A 7 GTGEKPYNCKECGKSFRWASCLLKHQRV--HSGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHGGG--GTSCCCCSTTCC
T ss_pred CCCCcCeECCccccccCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 4578999999999999999999999999 999888 88877
No 126
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.88 E-value=1.1e-09 Score=64.30 Aligned_cols=39 Identities=21% Similarity=0.243 Sum_probs=34.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ +|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2en8_A 7 GSGEKSHTCDECGKNFCYISALRIHQRV--HMGEKCSGPSSG 46 (46)
T ss_dssp CCCCSSEECTTTCCEESSHHHHHHHHTT--TCCSCSSCCSCC
T ss_pred CCCCCCeECCCcCcccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3578999999999999999999999998 999888 88876
No 127
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.87 E-value=8.8e-10 Score=64.68 Aligned_cols=39 Identities=33% Similarity=0.583 Sum_probs=34.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emm_A 7 GTGERPHKCNECGKSFIQSAHLIQHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHHH--HSCCCTTSSSCC
T ss_pred cCCCCCeeCCCCChhhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3578999999999999999999999999 888888 88877
No 128
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.87 E-value=1.1e-09 Score=64.23 Aligned_cols=39 Identities=28% Similarity=0.479 Sum_probs=34.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||.|+.|++.|.....|..|+++ |+++++ .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2ytj_A 7 GTGEKPYICAECGKAFTIRSNLIKHQKI--HTKQKPSGPSSG 46 (46)
T ss_dssp TSSCCSEECSSSCCEESSHHHHHHHHHH--TSCCCCSSCSCC
T ss_pred CCCCcCeECCCCChhhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3578999999999999999999999999 998888 88876
No 129
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.87 E-value=9.2e-10 Score=64.62 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=34.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emy_A 7 GTGENPYECHECGKAFSRKYQLISHQRT--HAGEKPSGPSSG 46 (46)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHH--HTTSCCSCSSCC
T ss_pred CCCCcCcCCCCCCcccCcHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4578999999999999999999999999 888888 88876
No 130
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=98.87 E-value=1.9e-09 Score=63.23 Aligned_cols=39 Identities=26% Similarity=0.436 Sum_probs=35.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2el6_A 7 GAGVNPYKCSQCEKSFSGKLRLLVHQRM--HTREKPSGPSSG 46 (46)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHHGG--GCCSSCCSCCCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4588999999999999999999999999 999988 88877
No 131
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.87 E-value=1.9e-09 Score=63.26 Aligned_cols=40 Identities=25% Similarity=0.404 Sum_probs=36.4
Q ss_pred CCCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 8 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
.-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ep0_A 6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSTTCCSEECSSSCCEESSHHHHHHHHTT--TSSSCCCSCCCC
T ss_pred CCCCCCCeeCcccCcccCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 34689999999999999999999999999 999988 89877
No 132
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=1.2e-09 Score=64.09 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=34.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ +|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eov_A 7 GTGEKPYKCSDCGKSFTWKSRLRIHQKC--HTGERHSGPSSG 46 (46)
T ss_dssp CSSCCSCBCSSSCCBCSSHHHHHHHHHH--HSCCSSCCSCCC
T ss_pred CCCCCCccCCccChhhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3578999999999999999999999998 888888 88876
No 133
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=1e-09 Score=64.43 Aligned_cols=39 Identities=33% Similarity=0.508 Sum_probs=34.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ytd_A 7 GSGEKPYKCSECGKAFHRHTHLNEHRRI--HTGYRPSGPSSG 46 (46)
T ss_dssp SCCCCSEECSSSCCEESSHHHHHHHHHH--HTCCCSSCSSCC
T ss_pred cCCCcCeECCCCCCeeCChHHHHHHHHH--cCCCCCCCCCCC
Confidence 3578999999999999999999999999 998888 88876
No 134
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=1.3e-09 Score=63.99 Aligned_cols=39 Identities=23% Similarity=0.463 Sum_probs=34.2
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2en1_A 7 GSGEKPFKCEECGKRFTQNSQLHSHQRV--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSEEETTTTEEESSHHHHHHHGGG--GSCCCCSCCCCC
T ss_pred CCCCCCeeCCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3578999999999999999999999998 888888 88876
No 135
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=1e-09 Score=64.41 Aligned_cols=39 Identities=28% Similarity=0.485 Sum_probs=34.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|++|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~c 46 (46)
T 2ytk_A 7 GSGEKPYKCNECGKVFTQNSHLTNHWRI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSSSCSEECSSSCCEESSHHHHHHHHHH--HSSSSCSSCCCC
T ss_pred CCCCCCEeCCcCCCccCCHHHHHHHHHH--HCCCCCCCCCCC
Confidence 3578999999999999999999999999 888888 88876
No 136
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=1.5e-09 Score=63.96 Aligned_cols=39 Identities=23% Similarity=0.445 Sum_probs=35.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhh-hcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|++ + |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~--H~~~k~~~C~~C 47 (47)
T 2epx_A 7 GTGKKPYECIECGKAFIQNTSLIRHWRYY--HTGEKPSGPSSG 47 (47)
T ss_dssp CCCCCSBCCSSSCCCBSSHHHHHHHHTTT--TTTSCSSSCCCC
T ss_pred cCCCCCEECCccCchhCChHHHHHHhHhh--cCCCCCCCCCCC
Confidence 457899999999999999999999999 8 999988 88877
No 137
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=1.3e-09 Score=63.87 Aligned_cols=39 Identities=23% Similarity=0.355 Sum_probs=34.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||.|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eme_A 7 GSGEKPYVCDYCGKAFGLSAELVRHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp TCCCCSEECSSSCCEESSHHHHHHHHGG--GCCCSCCSSCCC
T ss_pred CCCCCCeECCCCChhhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3578999999999999999999999998 988888 88877
No 138
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=8.1e-10 Score=64.90 Aligned_cols=39 Identities=31% Similarity=0.439 Sum_probs=33.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||.|+.|++.|...+.|..|+++ |+++++ +|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2eoo_A 7 GSGERPYGCNECGKNFGRHSHLIEHLKR--HFREKSSGPSSG 46 (46)
T ss_dssp CSCCCCEECSSSCCEESSHHHHHHHHHH--HHSTTSSCCSCC
T ss_pred CCCCCCEEccccCcccCCHHHHHHHHHH--HcCCCCCCCCCC
Confidence 3578899999999999999999999998 888888 88776
No 139
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=1.6e-09 Score=63.58 Aligned_cols=39 Identities=21% Similarity=0.407 Sum_probs=34.8
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ytm_A 7 GTGEKPYKCMECGKAFGDNSSCTQHQRL--HTGQRPSGPSSG 46 (46)
T ss_dssp CSSCCSSSBTTTTBCCSSHHHHHHHHHH--HHSCCCCCCCCC
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4578999999999999999999999999 888888 88876
No 140
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=1e-09 Score=64.39 Aligned_cols=39 Identities=23% Similarity=0.355 Sum_probs=34.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2en6_A 7 GSGEKPYGCNECGKTFSQKSILSAHQRT--HTGEKPSGPSSG 46 (46)
T ss_dssp CCSSCCEEETTTTEEESSHHHHHHHHHH--HSSCCCSSSCCC
T ss_pred cCCCcCeECCCCCcccCchHHHHHHHHH--cCCCCCCCCCCC
Confidence 4578999999999999999999999999 888888 88876
No 141
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.85 E-value=1e-09 Score=64.36 Aligned_cols=39 Identities=26% Similarity=0.335 Sum_probs=34.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2epw_A 7 GTGEKPCKCTECGKAFCWKSQLIMHQRT--HVDDKHSGPSSG 46 (46)
T ss_dssp CCCCCSEECSSSCCEESSSHHHHHHHHH--CCSCCCSCCCCC
T ss_pred CCCCCCeeCCCCCCccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3578999999999999999999999999 998888 88876
No 142
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.85 E-value=2.7e-09 Score=67.39 Aligned_cols=43 Identities=26% Similarity=0.425 Sum_probs=36.6
Q ss_pred CCCCCCCCCCcccccc--cccccCCHHHHHHhh-hhcCCCCCcc-cccc
Q 025404 4 EAELPKRSTARHKCVA--CYKQFKRKDHLIEHM-KISYHSVHQP-KCAV 48 (253)
Q Consensus 4 ~~~~~~~~~k~~~C~~--C~k~f~~~~~l~~H~-~~~~H~~~~~-~C~~ 48 (253)
+..+.-+|+|||+|.. |++.|.+.+.|..|+ ++ |++++| .|..
T Consensus 17 ~~~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rri--HTgEKP~~~~~ 63 (73)
T 1x3c_A 17 EFPTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAV--HKSDLPAFSAE 63 (73)
T ss_dssp CCSSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHH--SSSCCCCCCCS
T ss_pred cccccccCCCCeECCCCCcChhHcCHHHHHHHhhhh--CCCCCCccccc
Confidence 4455678999999965 999999999999997 68 999999 7754
No 143
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.85 E-value=9.1e-10 Score=64.65 Aligned_cols=39 Identities=28% Similarity=0.475 Sum_probs=33.9
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|++|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2emh_A 7 GTGERPYICTVCGKAFTDRSNLIKHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp CSCCCSEECTTTCCEESSHHHHHHHHHH--HHCSSCSSSCCC
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3578999999999999999999999998 888888 88876
No 144
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=1.2e-09 Score=64.08 Aligned_cols=39 Identities=23% Similarity=0.312 Sum_probs=34.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ +|..|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2yso_A 7 GSREKSHQCRECGEIFFQYVSLIEHQVL--HMGQKNSGPSSG 46 (46)
T ss_dssp SSCCCCEECTTTCCEESSHHHHHHHHHH--HSCCSCCCTTCC
T ss_pred cCCCCCEEccccChhhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3578999999999999999999999999 898888 88876
No 145
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.85 E-value=1e-09 Score=64.44 Aligned_cols=39 Identities=23% Similarity=0.305 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||.|+.|++.|.....|..|+++ |+++++ +|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emp_A 7 GTGVKPYMCNECGKAFSVYSSLTTHQVI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESCHHHHHHHHHH--HHCCSCCSCCCC
T ss_pred cCCCcCeECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3578999999999999999999999998 888888 88876
No 146
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.84 E-value=9.2e-10 Score=64.61 Aligned_cols=39 Identities=23% Similarity=0.485 Sum_probs=33.9
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| +|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytg_A 7 GTGEKPFKCGECGKSYNQRVHLTQHQRV--HTGEKPSGPSSG 46 (46)
T ss_dssp CSSCCSEECTTTCCEESSSHHHHTTGGG--GSSCCSSCSCCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3578899999999999999999999998 888888 88876
No 147
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.84 E-value=1.9e-09 Score=63.28 Aligned_cols=39 Identities=26% Similarity=0.345 Sum_probs=34.9
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em8_A 7 GSGEKPYKCVECGKGYKRRLDLDFHQRV--HTGEKLSGPSSG 46 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHHHHHHHH--HHCCCCCCSCCC
T ss_pred CCCCCCeECcccCchhCCHHHHHHHHHH--HcCCCCCCCCCC
Confidence 4578999999999999999999999999 998888 88877
No 148
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=98.84 E-value=1.7e-09 Score=63.43 Aligned_cols=39 Identities=31% Similarity=0.490 Sum_probs=34.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ +|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ely_A 7 GTGEKPFKCVECGKGFSRRSALNVHHKL--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSBCCSSSCCCBSSTTHHHHHHHH--HSCCSSCSCCCC
T ss_pred CCCCCCcccCccCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4578999999999999999999999999 888888 88876
No 149
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.83 E-value=8.6e-10 Score=64.75 Aligned_cols=39 Identities=26% Similarity=0.451 Sum_probs=33.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2yu8_A 7 GTGEKPYKCNECGKVFTQNSHLARHRRV--HTGGKPSGPSSG 46 (46)
T ss_dssp CCCCSSEECSSSCCEESSSHHHHHHTHH--HHSCCCSCSCCC
T ss_pred CCCCCCeECCcCCchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3578899999999999999999999998 888888 88776
No 150
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.83 E-value=1.9e-09 Score=63.19 Aligned_cols=39 Identities=26% Similarity=0.481 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||.|+.|++.|.....|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~~ 46 (46)
T 2ep3_A 7 GTGEKPYRCAECGKAFTDRSNLFTHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHTT--TTTSCCCCTTCC
T ss_pred CCCCCCeECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3578999999999999999999999998 988888 88765
No 151
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.82 E-value=1.9e-09 Score=63.28 Aligned_cols=39 Identities=21% Similarity=0.337 Sum_probs=35.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||.|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytt_A 7 GEGEKPYQCSECGKSFSGSYRLTQHWIT--HTREKPSGPSSG 46 (46)
T ss_dssp CSCCCTTCCSSSCCCCSSHHHHHHHHTH--HHHCCCCSCCCC
T ss_pred CCCCCCeeCCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4588999999999999999999999999 999888 88877
No 152
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=98.80 E-value=4.6e-10 Score=70.64 Aligned_cols=49 Identities=18% Similarity=0.348 Sum_probs=39.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhh
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH 62 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H 62 (253)
-++++||+|+.|++.|.....|. ++ |+++++ .|+.||+.|....++..+
T Consensus 9 H~~~k~~~C~~C~k~F~~~~~l~---~~--H~~~k~~~C~~C~k~f~~~~~~~~~ 58 (62)
T 1vd4_A 9 STNRASFKCPVCSSTFTDLEANQ---LF--DPMTGTFRCTFCHTEVEEDESAMPK 58 (62)
T ss_dssp CCSSSEEECSSSCCEEEHHHHHH---HE--ETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred cCCCCCccCCCCCchhccHHHhH---hh--cCCCCCEECCCCCCccccCcccccc
Confidence 35788899999999998888776 66 888888 899999888877765543
No 153
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=1.5e-09 Score=69.13 Aligned_cols=55 Identities=22% Similarity=0.333 Sum_probs=40.4
Q ss_pred CCCCcc-ccccccccccCHHHHhhhh----CCCCCCCcCCccccccccc-ccccccCChHHHHHHHHHccCCCC
Q 025404 39 HSVHQP-KCAVCQKLSKSFESLREHL----TGPLSKAHCSGIFSDRGCN-LCMNIFDSPSSLIKHKEACSLSAP 106 (253)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~----~~~~~C~~C~~~f~~~~C~-~C~k~f~~~~~l~~H~~~h~~~~~ 106 (253)
..++++ .|+.|++.|. .++|..|+ ++||. |+ .||+.|...+.|..|+++|...+|
T Consensus 5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~------------C~~~C~k~f~~~~~L~~H~~~hc~~~~ 65 (66)
T 2eod_A 5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVA------------CPNQCGVGTVAREDLPGHLKDSCNTAL 65 (66)
T ss_dssp CCCCCEEECSSSCCEEE-HHHHHHHHHHCSSSEEE------------CTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred cCCCCCeeccccCCccC-HHHHHHHHHHcCCcCcc------------CCcccCcccccHHHHHHHHHhhcccCc
Confidence 345677 8888888888 88888887 33443 55 677777788888888888876654
No 154
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.77 E-value=5.5e-09 Score=61.23 Aligned_cols=39 Identities=28% Similarity=0.529 Sum_probs=34.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~~ 46 (46)
T 2em2_A 7 GSGEKPFKCKECGKAFRQNIHLASHLRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHH--HCCCCSSCSSCC
T ss_pred CCCCCCEECCcCCchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4578999999999999999999999999 998888 88764
No 155
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.73 E-value=7.4e-09 Score=60.61 Aligned_cols=38 Identities=29% Similarity=0.504 Sum_probs=33.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2enf_A 7 GTGEKPYKCNECGKVFTQNSHLVRHRGI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSCBCSSSCCBCSSHHHHHHHHTT--TTTSSCCCCSC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHh--hCCCCCCCCCC
Confidence 3578999999999999999999999999 998888 8764
No 156
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=98.73 E-value=4.6e-09 Score=65.24 Aligned_cols=43 Identities=16% Similarity=0.444 Sum_probs=28.6
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCC---ccccCccchhhhhhc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKIS 123 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C~~~f~~~~~l~~h~ 123 (253)
|+.|++.|.+.+.|..|+++|++++||. |++.|.....|..|+
T Consensus 5 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~ 50 (60)
T 2adr_A 5 CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50 (60)
T ss_dssp CTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred CCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence 4556666666667777777776666664 666666666676664
No 157
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.72 E-value=8.6e-09 Score=59.49 Aligned_cols=38 Identities=13% Similarity=0.212 Sum_probs=34.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|++
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 43 (43)
T 2yrm_A 5 SSGNGAFFCNECDCRFSEEASLKRHTLQ--THSDKSGPSSG 43 (43)
T ss_dssp CSSSCCBCCSSSCCCBSSHHHHHHHHHH--HTCTTCSSSCC
T ss_pred cCCCCCEECCCCCCeeCChHHHHHHHHh--hCCCCCccCCC
Confidence 4689999999999999999999999999 999988 8863
No 158
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.72 E-value=7.9e-09 Score=58.90 Aligned_cols=36 Identities=28% Similarity=0.481 Sum_probs=32.8
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C 41 (41)
T 2ept_A 5 SSGQRVYECQECGKSFRQKGSLTLHERI--HTGSGPSSG 41 (41)
T ss_dssp CCCCCCEECSSSCCEESSHHHHHHHGGG--CCCCSCSCC
T ss_pred cCCCCCeECCCCCCCcCCHHHHHHHHHH--hCCCCCcCC
Confidence 3589999999999999999999999999 999887 66
No 159
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.72 E-value=6.9e-09 Score=60.80 Aligned_cols=38 Identities=32% Similarity=0.536 Sum_probs=33.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|+.
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2ytp_A 7 GTGERHYECSECGKAFARKSTLIMHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp SCCCCCEECSSSCCEESSHHHHHHHHTT--TSCCCCCSSCC
T ss_pred cCCCCCeECCcCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 4578999999999999999999999999 998888 8763
No 160
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.72 E-value=3.3e-10 Score=73.36 Aligned_cols=55 Identities=20% Similarity=0.301 Sum_probs=46.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcC
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHC 72 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C 72 (253)
-.+++||.|+.|++.|.....|.. +++ .|+.|++.|.+.++|..|+ +++|.|+.|
T Consensus 13 h~~~~~~~C~~C~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C 73 (73)
T 2ctu_A 13 HLGDRSQKCSKCGIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG 73 (73)
T ss_dssp CCCCSEEECSSSCCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred hCCCCCeeCCcccchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence 357899999999999998776543 455 9999999999999999998 568888776
No 161
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.72 E-value=7.9e-09 Score=60.49 Aligned_cols=38 Identities=29% Similarity=0.470 Sum_probs=33.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yti_A 7 GTGEKPYKCNECGKVFTQNSHLARHRGI--HTGEKPSGPSS 45 (46)
T ss_dssp CSCCCTTCCSSSCCCCSSHHHHHHHHTT--TSCSCCSSTTC
T ss_pred CCCCcCeECCCCCcccCChhHHHHHhHh--cCCCCCCCCCC
Confidence 3578999999999999999999999999 999888 8763
No 162
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=1.1e-08 Score=59.56 Aligned_cols=37 Identities=24% Similarity=0.540 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~ 44 (45)
T 2epu_A 7 GTGQKPFECTHCGKSFRAKGNLVTHQRI--HTGEKSGPSS 44 (45)
T ss_dssp CCSCCSEEETTTTEEESSHHHHHHHHTT--TSSCCCCCSC
T ss_pred CCCCcCccCCCCCCccCChHHHHHHHHH--hCCCCCCCCC
Confidence 4689999999999999999999999999 999888 875
No 163
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=9.4e-09 Score=60.20 Aligned_cols=38 Identities=24% Similarity=0.520 Sum_probs=33.3
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||.|+.|++.|.....|..|+++ |++++| .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yth_A 7 GSGEKPFQCEECGKRFTQNSHLHSHQRV--HTGEKPSGPSS 45 (46)
T ss_dssp CCCSSSBCCSSSCCCBSSHHHHHHHGGG--GTTCCCSSCCC
T ss_pred CCCCcCCCCCCCCcccCCHHHHHHHHHh--cCCCCCCCCCC
Confidence 3578999999999999999999999999 998888 8763
No 164
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=8.7e-09 Score=60.31 Aligned_cols=38 Identities=32% Similarity=0.479 Sum_probs=33.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ +|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~ 45 (46)
T 2emg_A 7 GTGENPFICSECGKVFTHKTNLIIHQKI--HTGERPSGPSS 45 (46)
T ss_dssp CCSCCSCBCTTTCCBCSSHHHHHHHHTT--TSCCCCSCSCC
T ss_pred CCCCCCEECCccCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 4578999999999999999999999999 999888 8763
No 165
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=98.71 E-value=7.5e-09 Score=59.28 Aligned_cols=36 Identities=31% Similarity=0.550 Sum_probs=32.2
Q ss_pred CCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
++++||+|+.|++.|.....|..|+++ |+++++ .|+
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 42 (42)
T 2el5_A 6 SGENPYECSECGKAFNRKDQLISHQRT--HAGESGPSSG 42 (42)
T ss_dssp SSCCSEECSSSCCEESSHHHHHHHHGG--GCCCCSCCCC
T ss_pred CCCCCccCCCcChhhCCHHHHHHHHHh--cCCCCCCCCC
Confidence 578999999999999999999999999 998887 773
No 166
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=9.5e-09 Score=60.17 Aligned_cols=38 Identities=26% Similarity=0.480 Sum_probs=33.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2em6_A 7 GMGEKCYKCDVCGKEFSQSSHLQTHQRV--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCBCSSSCCBCSSHHHHHHHHTT--TSSSCCCCTTC
T ss_pred cCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 3578999999999999999999999999 999888 8863
No 167
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=9.5e-09 Score=58.81 Aligned_cols=35 Identities=23% Similarity=0.563 Sum_probs=31.9
Q ss_pred CCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cc
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (253)
++++||+|+.|++.|...+.|..|+++ |+++++ .|
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 41 (42)
T 2yte_A 6 SGEKPYSCAECKETFSDNNRLVQHQKM--HTVKSGPSS 41 (42)
T ss_dssp CSCCSCBCTTTCCBCSSHHHHHHHHHH--TSCCSSCCC
T ss_pred CCCCCeECCCCCCccCCHHHHHHHHHH--hCCCCCCCC
Confidence 578999999999999999999999999 998887 76
No 168
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=8.8e-09 Score=60.29 Aligned_cols=38 Identities=21% Similarity=0.436 Sum_probs=33.1
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||.|+.|++.|.....|..|+++ |++++| .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eq2_A 7 GTGGKPYQCNECGKAFSQTSKLARHQRV--HTGEKPSGPSS 45 (46)
T ss_dssp SSSSCSSSCCSSCCCCSSHHHHHHHGGG--GCCCCCCCCCC
T ss_pred cCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 3578999999999999999999999999 988888 7753
No 169
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=1.4e-08 Score=59.48 Aligned_cols=38 Identities=29% Similarity=0.532 Sum_probs=33.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eon_A 7 GTGEKPYKCQVCGKAFRVSSHLVQHHSV--HSGERPSGPSS 45 (46)
T ss_dssp CSSCCSCBCSSSCCBCSSHHHHHHHTTT--TTSCCSCTTSC
T ss_pred CCCCcccCCCCCCcccCcHHHHHHHHHh--cCCCCCCCCCC
Confidence 4578999999999999999999999999 999888 8863
No 170
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=8e-09 Score=60.43 Aligned_cols=38 Identities=26% Similarity=0.504 Sum_probs=33.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2ytf_A 7 GTGEKPFECSECQKAFNTKSNLIVHQRT--HTGEKPSGPSS 45 (46)
T ss_dssp SCCCCSEECSSSCCEESSHHHHHHHHHT--SCSSSSSCCCC
T ss_pred CCCCCCcCCCCCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3578999999999999999999999999 999888 8864
No 171
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=8.9e-09 Score=60.24 Aligned_cols=38 Identities=29% Similarity=0.456 Sum_probs=33.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~p~~C~~ 45 (46)
T 2yts_A 7 GTGEKPYICNECGKSFIQKSHLNRHRRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHHHHHGGG--TSSCCSSCCCC
T ss_pred CCCCcCEECCCCChhhCChHHHHHHHHh--cCCCCCcCCCC
Confidence 3578999999999999999999999999 998888 8764
No 172
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.70 E-value=7e-09 Score=60.76 Aligned_cols=38 Identities=29% Similarity=0.483 Sum_probs=33.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2em4_A 7 GTGQRPYECIECGKAFKTKSSLICHRRS--HTGEKPSGPSS 45 (46)
T ss_dssp CCCSSSEECSSSCCEESSHHHHHHHHHH--HSSSSCCCCCC
T ss_pred cCCCcCcCCCCCCCccCCHHHHHHHHHh--cCCCCCCCCCC
Confidence 4578999999999999999999999999 998888 8763
No 173
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=98.70 E-value=6.8e-09 Score=60.81 Aligned_cols=38 Identities=24% Similarity=0.459 Sum_probs=33.3
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |++++| +|++
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2emj_A 7 GTGEKPFECAECGKSFSISSQLATHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSEECSSSSCEESSHHHHHHHHHH--HTTSCSSSSCC
T ss_pred CCCCCCEECCCCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 4578999999999999999999999999 998888 8764
No 174
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.70 E-value=1.1e-08 Score=59.96 Aligned_cols=37 Identities=22% Similarity=0.422 Sum_probs=33.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2eoh_A 7 GSGKKPYECKECRKTFIQIGHLNQHKRV--HTGERSSGPS 44 (46)
T ss_dssp CCCSCSCCCSSSCCCCSSHHHHHHHHHH--CSSCCSCSTT
T ss_pred cCCCCCcCCCCcCchhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 4578999999999999999999999999 999888 775
No 175
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.70 E-value=1e-08 Score=58.75 Aligned_cols=36 Identities=22% Similarity=0.448 Sum_probs=32.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (253)
-++++||+|+.|++.|...+.|..|+++ |++++| +|
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 42 (42)
T 2eos_A 6 SGGEKPYPCEICGTRFRHLQTLKSHLRI--HTGSGPSSG 42 (42)
T ss_dssp CSSSCCBCCSSSCCCBSSHHHHHHHTTT--TSCCSSTTC
T ss_pred cCCCCCEECCCCCCccCCHHHHHHHHHh--cCCCCCCCC
Confidence 3578999999999999999999999999 998887 65
No 176
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=1.5e-08 Score=59.32 Aligned_cols=38 Identities=26% Similarity=0.538 Sum_probs=34.3
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|++
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eom_A 7 GHGERGHRCSDCGKFFLQASNFIQHRRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCSSCCCSSSCCCCSSHHHHHHHHHH--HSSCCCSSCCC
T ss_pred CCCCCCcCCCCCCCeeCChHHHHHHHHH--hCCCCCCCCCC
Confidence 4589999999999999999999999999 999888 8863
No 177
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.69 E-value=9.7e-09 Score=60.61 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=35.7
Q ss_pred CCCCCccccc--ccccccCCHHHHHHhhhhcCCCCCcc-ccccc
Q 025404 9 KRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (253)
Q Consensus 9 ~~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (253)
-++++||+|. .|++.|.....|..|+++ |+++++ +|..|
T Consensus 7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 48 (48)
T 2ent_A 7 GTGEKPFACTWPGCGWRFSRSDELSRHRRS--HSGVKPSGPSSG 48 (48)
T ss_dssp SCCCCCEECCSSSCCCEESSHHHHHHHHTT--SCCCCSCSSCCC
T ss_pred cCCCCCeECCCCCCCCccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4579999998 899999999999999999 999998 99877
No 178
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.69 E-value=9.3e-09 Score=60.21 Aligned_cols=38 Identities=26% Similarity=0.466 Sum_probs=33.3
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2en9_A 7 GAGKKLFKCNECKKTFTQSSSLTVHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCSSCCCBCTTTCCBCSSHHHHHHHHHH--HTSSCCCSCCC
T ss_pred CCCCCCEECCccCcccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 4578999999999999999999999999 998888 8763
No 179
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.69 E-value=9.6e-09 Score=59.46 Aligned_cols=37 Identities=32% Similarity=0.530 Sum_probs=32.1
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ +|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2eoj_A 7 GTGENPYECCECGKVFSRKDQLVSHQKT--HSGQSGPSSG 44 (44)
T ss_dssp SSSCCSCEETTTTEECSSHHHHHHHHTT--SSSSCSCCCC
T ss_pred cCCCcCeeCCCCCCccCCHHHHHHHHHH--cCCCCCCCCC
Confidence 3578999999999999999999999998 888887 774
No 180
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.69 E-value=9.6e-09 Score=60.13 Aligned_cols=38 Identities=26% Similarity=0.427 Sum_probs=33.3
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+.
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2emi_A 7 GTGERHYECSECGKAFIQKSTLSMHQRI--HRGEKPSGPSS 45 (46)
T ss_dssp CSSCCCEECSSSCCEESSHHHHHHHHGG--GCSCCCCSCCC
T ss_pred cCCCCCCCCCCCCcccCCHHHHHHHHhH--hCCCCCCCCCC
Confidence 4578999999999999999999999999 998888 7753
No 181
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.69 E-value=1.1e-08 Score=59.80 Aligned_cols=38 Identities=26% Similarity=0.446 Sum_probs=33.3
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||.|+.|++.|.....|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2ep1_A 7 GTGEKPYECSDCGKSFIKKSQLHVHQRI--HTGENPSGPSS 45 (46)
T ss_dssp CSSCCSSCCSSSCCCCSSHHHHHHHHGG--GSSSCCCSSSC
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3578999999999999999999999999 998888 8763
No 182
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.69 E-value=1.1e-08 Score=59.83 Aligned_cols=38 Identities=26% Similarity=0.440 Sum_probs=33.3
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eq1_A 7 GTGEKPYKCNECGKAFRAHSNLTTHQVI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCSCCCCCTTTTCCCSSHHHHHHHHTT--TCCSCCSSCCC
T ss_pred cCCCCCeECCcCChhhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3578999999999999999999999998 998888 8763
No 183
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=98.68 E-value=1e-08 Score=58.65 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=32.2
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|
T Consensus 6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~--H~~~k~~~C 42 (42)
T 2epc_A 6 SGGETPYLCGQCGKSFTQRGSLAVHQRS--CSQSGPSSG 42 (42)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHH--TTCCCCCCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHhhh--cCCCCCCCC
Confidence 3578999999999999999999999999 998887 66
No 184
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.68 E-value=1e-08 Score=58.64 Aligned_cols=36 Identities=28% Similarity=0.541 Sum_probs=31.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 42 (42)
T 2ytb_A 6 SGGEKPYRCDQCGKAFSQKGSLIVHIRV--HTGSGPSSG 42 (42)
T ss_dssp CCSCCSBCCTTTTCCBSSHHHHHTTGGG--TSCCSCCCC
T ss_pred cCCCCCeeCCCccchhCCHHHHHHHHHH--hCCCCCCCC
Confidence 3578999999999999999999999999 988887 65
No 185
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.68 E-value=9.9e-09 Score=57.62 Aligned_cols=32 Identities=28% Similarity=0.376 Sum_probs=29.4
Q ss_pred CCCCCcccccc--cccccCCHHHHHHhhhhcCCCCC
Q 025404 9 KRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVH 42 (253)
Q Consensus 9 ~~~~k~~~C~~--C~k~f~~~~~l~~H~~~~~H~~~ 42 (253)
.+++|||+|+. |++.|.+++.|..|+++ |+++
T Consensus 4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~--Htg~ 37 (38)
T 2eln_A 4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKV--HTAL 37 (38)
T ss_dssp SSCCCCEECSSSSCCCEESCHHHHHHHHHH--HSCC
T ss_pred CCCCCCCCCCCCCCCCccCCHHHHHHHHHh--cCCC
Confidence 56899999986 99999999999999999 9875
No 186
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.68 E-value=1.8e-08 Score=58.94 Aligned_cols=38 Identities=24% Similarity=0.458 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||.|+.|++.|.....|..|+++ |+++++ .|+.
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2enh_A 7 GTGEKPYECDVCRKAFSHHASLTQHQRV--HSGEKPSGPSS 45 (46)
T ss_dssp CCCSSSCBCTTTCCBCSSSHHHHHHGGG--SCCSCCCCCCC
T ss_pred cCCCCCcCCCCcCchhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 4688999999999999999999999999 999888 8753
No 187
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.68 E-value=8.7e-09 Score=60.27 Aligned_cols=38 Identities=26% Similarity=0.399 Sum_probs=32.9
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||.|+.|++.|.....|..|+++ |++++| .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eow_A 7 GTGEKPYKCNECGKAFRARSSLAIHQAT--HSGEKPSGPSS 45 (46)
T ss_dssp SCCCCCEECTTSCCEESSHHHHHHHHHH--HCCCSCSCTTC
T ss_pred CCCCCCeeccccCChhcCHHHHHHHHHH--cCCCCCCCCCC
Confidence 3578999999999999999999999998 888888 8763
No 188
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.68 E-value=1.1e-08 Score=59.85 Aligned_cols=38 Identities=26% Similarity=0.488 Sum_probs=33.2
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||.|+.|++.|.....|..|+++ |++++| .|++
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yrj_A 7 GTGEKPYRCGECGKAFAQKANLTQHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCEECSSSCCEESSHHHHHHHHTT--TSSCCSSCSCC
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 3578999999999999999999999998 998888 8763
No 189
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.68 E-value=1.2e-08 Score=59.02 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=32.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
-++++||.|+.|++.|.....|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2en7_A 7 GTGMKPYVCNECGKAFRSKSYLIIHTRT--HTGESGPSSG 44 (44)
T ss_dssp SSSSSSSCCTTTCCCCSSHHHHHHHHTT--TCCSSSSCCC
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHhhh--cCCCCCCCCC
Confidence 3578999999999999999999999998 998887 774
No 190
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=2.4e-08 Score=68.02 Aligned_cols=65 Identities=12% Similarity=0.000 Sum_probs=54.1
Q ss_pred CCCCCCcCCcccccccccccccccCChHHHHHHHHH-ccCCCC--------CC---ccccCccchhhhhhccccccc
Q 025404 65 GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA-CSLSAP--------VP---FEKTLSNAESQKKISGAIDEK 129 (253)
Q Consensus 65 ~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~-h~~~~~--------~~---C~~~f~~~~~l~~h~~~~~~~ 129 (253)
..+.|...+..+....|+.|++.|.....|..|+++ |.++++ |. |++.|.....|..|+..|.+.
T Consensus 12 ~~~~c~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~ 88 (95)
T 2ej4_A 12 QELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE 88 (95)
T ss_dssp CCCCCCCCCSSCSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTC
T ss_pred CCceeEeecCCcCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCC
Confidence 456676666666666799999999999999999998 988887 65 889999999999999877653
No 191
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.68 E-value=1.1e-08 Score=59.10 Aligned_cols=37 Identities=22% Similarity=0.424 Sum_probs=32.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2eof_A 7 GTGEKPYECNECQKAFNTKSNLMVHQRT--HTGESGPSSG 44 (44)
T ss_dssp CSCCCSEECTTTCCEESCHHHHHHHHHH--TTTSSCSCCC
T ss_pred CCCCCCeECCCCCcccCCHhHHHHHHHH--hCCCCCCCCC
Confidence 3578999999999999999999999999 998887 774
No 192
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.68 E-value=8.6e-09 Score=60.34 Aligned_cols=38 Identities=29% Similarity=0.517 Sum_probs=33.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|++
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~ 45 (46)
T 2em3_A 7 GTGEKPYECKVCSKAFTQKAHLAQHQKT--HTGEKPSGPSS 45 (46)
T ss_dssp CSSCCSEECSSSCCEESSHHHHHHHHHH--HCCCCCCCSCC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3578999999999999999999999999 888888 7764
No 193
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.67 E-value=1.4e-08 Score=58.85 Aligned_cols=37 Identities=27% Similarity=0.566 Sum_probs=32.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2emb_A 7 GHTRKRYECSKCQATFNLRKHLIQHQKT--HAAKSGPSSG 44 (44)
T ss_dssp CCCCSSEECTTTCCEESCHHHHHHHGGG--GCCCCCTTCC
T ss_pred cCCCCCeECCCCCCccCCHHHHHHHHHH--cCCCCCcCCC
Confidence 3578999999999999999999999999 998888 774
No 194
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.67 E-value=1.2e-08 Score=59.74 Aligned_cols=30 Identities=27% Similarity=0.475 Sum_probs=17.7
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytn_A 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44 (46)
T ss_dssp CTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred CCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence 344555555666666666666666666654
No 195
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.66 E-value=9.7e-09 Score=59.49 Aligned_cols=30 Identities=27% Similarity=0.478 Sum_probs=20.4
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 13 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 42 (44)
T 2emx_A 13 CSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42 (44)
T ss_dssp CSSSSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 445566666777777777777777777765
No 196
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.66 E-value=1.1e-08 Score=59.86 Aligned_cols=29 Identities=21% Similarity=0.246 Sum_probs=15.1
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 16 ~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emf_A 16 TECGKAFTRKSTLSMHQKIHTGEKPSGPS 44 (46)
T ss_dssp SSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred CCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 33444455555555555555555555543
No 197
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.66 E-value=8.3e-09 Score=59.10 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=31.5
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 42 (42)
T 2en2_A 6 SGGEKPYKCETCGARFVQVAHLRAHVLI--HTGSGPSSG 42 (42)
T ss_dssp CCSSCSEECTTTCCEESSHHHHHHHTHH--HHSCCSSCC
T ss_pred cCCCCCEeCCCcChhhCCHHHHHHHHHH--cCCCCCCCC
Confidence 3578999999999999999999999998 888877 65
No 198
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.66 E-value=1.1e-08 Score=59.82 Aligned_cols=37 Identities=27% Similarity=0.354 Sum_probs=32.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2yto_A 7 GTGEKPYKCSDCGKAFTRKSGLHIHQQS--HTGERHSGPS 44 (46)
T ss_dssp CCSCCCEECSSSCCEESSHHHHHHHHHH--HTCCCBTTTB
T ss_pred cCCCCCEECcccCCccCCHhHHHHHHHH--cCCCCCCCCC
Confidence 3578999999999999999999999999 888888 876
No 199
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.66 E-value=1.2e-08 Score=59.61 Aligned_cols=31 Identities=26% Similarity=0.418 Sum_probs=22.0
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eq4_A 15 CKECGKSFSRAPCLLKHERLHSGEKPSGPSS 45 (46)
T ss_dssp BTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred CCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence 4456666777777777777777777777753
No 200
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.65 E-value=1.4e-08 Score=59.49 Aligned_cols=29 Identities=10% Similarity=-0.002 Sum_probs=17.2
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 16 ~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2elz_A 16 EDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44 (46)
T ss_dssp SSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred cccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence 34455555666666666666666666654
No 201
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.65 E-value=1.2e-08 Score=59.63 Aligned_cols=30 Identities=20% Similarity=0.293 Sum_probs=18.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||+|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2epz_A 15 CIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44 (46)
T ss_dssp CTTTCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred CCCCCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence 344555666666666666666666666664
No 202
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.65 E-value=1.1e-08 Score=59.77 Aligned_cols=30 Identities=27% Similarity=0.421 Sum_probs=19.2
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emm_A 15 CNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred CCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 344555666666666777777777776664
No 203
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=98.65 E-value=1.3e-08 Score=59.59 Aligned_cols=31 Identities=23% Similarity=0.444 Sum_probs=22.4
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||+|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emk_A 15 CKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred CCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4456667777777888888888888887753
No 204
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.65 E-value=1.2e-08 Score=59.70 Aligned_cols=29 Identities=24% Similarity=0.285 Sum_probs=16.5
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eml_A 16 SVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44 (46)
T ss_dssp SSSCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred CCcCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence 34445555555666666666666666554
No 205
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=98.65 E-value=1.3e-08 Score=59.53 Aligned_cols=29 Identities=24% Similarity=0.204 Sum_probs=17.9
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 16 ~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em0_A 16 RECDMCFSQASSLRLHQNVHVGEKPSGPS 44 (46)
T ss_dssp SSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred CCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence 34555556666666666666666666654
No 206
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.65 E-value=1.2e-08 Score=59.72 Aligned_cols=29 Identities=24% Similarity=0.321 Sum_probs=15.6
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ene_A 16 NECGKVFRHNSYLSRHQRIHTGEKPSGPS 44 (46)
T ss_dssp SSSCCEESSHHHHHHHHTTTCCCCCCSCC
T ss_pred CCCCchhCChHHHHHHHhhcCCCCCCCCC
Confidence 33444555555555555555555555554
No 207
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.65 E-value=1.2e-08 Score=59.68 Aligned_cols=30 Identities=30% Similarity=0.530 Sum_probs=18.2
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emh_A 15 CTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44 (46)
T ss_dssp CTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred CCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence 344555556666666666666666666654
No 208
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.65 E-value=9.7e-09 Score=60.06 Aligned_cols=38 Identities=26% Similarity=0.449 Sum_probs=32.1
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (253)
-++++||.|+.|++.|.....|..|+++ |++++| .|++
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~kp~~C~~ 45 (46)
T 2eor_A 7 GTGEKPYNCEECGKAFIHDSQLQEHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp SSCCCSEECTTTCCEESSHHHHHHHHHH--HHSCCCSSSTT
T ss_pred cCCCcCccCCCCCCCcCCHHHHHHHHHh--cCCCCCCCCCC
Confidence 3578899999999999999999999998 888887 7753
No 209
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.65 E-value=1.5e-08 Score=59.29 Aligned_cols=30 Identities=27% Similarity=0.365 Sum_probs=17.6
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eop_A 15 CRECGKSFSFNSQLIVHQRIHTGENPSGPS 44 (46)
T ss_dssp CTTTCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred CCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 334555555666666666666666666654
No 210
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=98.65 E-value=1.2e-08 Score=59.62 Aligned_cols=30 Identities=27% Similarity=0.465 Sum_probs=17.4
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ema_A 15 CNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred CCCCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence 334455555566666666666666666654
No 211
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.64 E-value=1.4e-08 Score=58.85 Aligned_cols=37 Identities=24% Similarity=0.462 Sum_probs=32.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
-++++||.|+.|++.|.....|..|+++ |+++++ +|+
T Consensus 7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (44)
T 2eou_A 7 GAAKTTSECQECGKIFRHSSLLIEHQAL--HAGESGPSSG 44 (44)
T ss_dssp CSSSCCCCCTTTCCCCSSHHHHHHHHHH--HTTSCCCCCC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHH--HCCCCCCCCC
Confidence 3578999999999999999999999999 998888 774
No 212
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.64 E-value=1.3e-08 Score=59.52 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=19.6
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emy_A 15 CHECGKAFSRKYQLISHQRTHAGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred CCCCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence 444556666666777777777777777665
No 213
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.64 E-value=1.1e-08 Score=59.81 Aligned_cols=37 Identities=22% Similarity=0.388 Sum_probs=32.0
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (46)
T 2eoz_A 7 GTGEKPYSCNVCGKAFVLSAHLNQHLRV--HTQETLSGPS 44 (46)
T ss_dssp CSSCCSEEETTTTEEESSHHHHHHHHHH--HSSCCSSSCC
T ss_pred CCCCCCeECcccChhhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 3578899999999999999999999998 888887 775
No 214
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.64 E-value=1.5e-08 Score=59.32 Aligned_cols=30 Identities=33% Similarity=0.403 Sum_probs=19.1
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytq_A 15 CSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44 (46)
T ss_dssp CSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred CCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence 344555666666666666666666666664
No 215
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.64 E-value=1.6e-08 Score=59.08 Aligned_cols=37 Identities=24% Similarity=0.425 Sum_probs=32.3
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
-++++||.|+.|++.|.....|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2eq3_A 7 GTGEKPYECNQCGKAFSVRSSLTTHQAI--HTGKKPSGPS 44 (46)
T ss_dssp SCCCCSSEETTTTEECSSHHHHHHHHTT--SCCCCCCCSC
T ss_pred CCCCCCeECCCCChhhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 3578999999999999999999999998 988888 775
No 216
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.64 E-value=1.1e-08 Score=59.85 Aligned_cols=37 Identities=24% Similarity=0.424 Sum_probs=33.4
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCC-Ccc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSV-HQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~-~~~-~C~ 47 (253)
-++++||.|+.|++.|.....|..|+++ |++ +++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~~C~ 45 (46)
T 2eoy_A 7 GQKEKCFKCNKCEKTFSCSKYLTQHERI--HTRGVKSGPSS 45 (46)
T ss_dssp CCCSCCEECSSSCCEESSSHHHHHHHTT--CCSCCTTSSSC
T ss_pred cCCCCCEECcCCCCcCCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 4588999999999999999999999999 998 888 885
No 217
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.64 E-value=1.4e-08 Score=59.37 Aligned_cols=29 Identities=24% Similarity=0.336 Sum_probs=17.1
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ytr_A 16 NECGKAFSQTSKLARHQRIHTGEKPSGPS 44 (46)
T ss_dssp TTTCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred CCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence 34455555666666666666666666654
No 218
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.64 E-value=1.3e-08 Score=59.56 Aligned_cols=29 Identities=21% Similarity=0.285 Sum_probs=16.4
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 16 ~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eq0_A 16 HECGKVFRRNSHLARHQLIHTGEKPSGPS 44 (46)
T ss_dssp TTTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred CCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 34445555555566666666666666554
No 219
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.64 E-value=1.2e-08 Score=59.66 Aligned_cols=30 Identities=27% Similarity=0.309 Sum_probs=18.0
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.||+.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eoo_A 15 CNECGKNFGRHSHLIEHLKRHFREKSSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred ccccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence 344555556666666666666666666654
No 220
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=98.64 E-value=1.4e-08 Score=59.42 Aligned_cols=29 Identities=24% Similarity=0.330 Sum_probs=15.4
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2el4_A 16 SQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44 (46)
T ss_dssp SSSSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred CCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 33444555555555555555555555554
No 221
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.64 E-value=1.4e-08 Score=59.30 Aligned_cols=30 Identities=20% Similarity=0.194 Sum_probs=20.5
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eov_A 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44 (46)
T ss_dssp CSSSCCBCSSHHHHHHHHHHHSCCSSCCSC
T ss_pred CCccChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence 444566666777777777777777777765
No 222
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.64 E-value=1.3e-08 Score=59.45 Aligned_cols=30 Identities=27% Similarity=0.441 Sum_probs=19.3
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eoe_A 15 CNECGKVFTQNSHLANHQRIHTGVKPSGPS 44 (46)
T ss_dssp ETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred CCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence 444556666666666666667777766664
No 223
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.64 E-value=1.4e-08 Score=59.39 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=22.3
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoq_A 15 CDICGKSFCGRSRLNRHSMVHTAEKPSGPSS 45 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred CCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4456666777777888888888888887753
No 224
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.63 E-value=1.5e-08 Score=59.23 Aligned_cols=30 Identities=30% Similarity=0.470 Sum_probs=20.3
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytj_A 15 CAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred CCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence 444556666677777777777777777765
No 225
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.63 E-value=1.4e-08 Score=59.34 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=17.2
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2em7_A 15 CEECGKGFICRRDLYTHHMVHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred CCCccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 334455555566666666666666666654
No 226
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.63 E-value=1.7e-08 Score=59.04 Aligned_cols=29 Identities=28% Similarity=0.345 Sum_probs=15.2
Q ss_pred hhhhcCCCCCcc-ccccccccccCHHHHhhhh
Q 025404 33 HMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (253)
Q Consensus 33 H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (253)
|+++ |+++++ .|+.|++.|.+.++|..|+
T Consensus 3 H~~~--H~~~~~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2en1_A 3 SGSS--GSGEKPFKCEECGKRFTQNSQLHSHQ 32 (46)
T ss_dssp STTC--CCCCCSEEETTTTEEESSHHHHHHHG
T ss_pred cccC--CCCCCCeeCCCCCcccCCHHHHHHHH
Confidence 5555 666555 5555555554444444444
No 227
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.63 E-value=2.4e-08 Score=60.66 Aligned_cols=39 Identities=26% Similarity=0.254 Sum_probs=22.7
Q ss_pred CCCCcc-ccccccccccCHHHHhhhh------CCCCCCCcCCcccc
Q 025404 39 HSVHQP-KCAVCQKLSKSFESLREHL------TGPLSKAHCSGIFS 77 (253)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~------~~~~~C~~C~~~f~ 77 (253)
|+++++ .|+.|++.|.+...|..|+ +++|.|..|++.|.
T Consensus 7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~ 52 (54)
T 2eps_A 7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52 (54)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence 555555 6666666666666666664 34555555555554
No 228
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.63 E-value=1.7e-08 Score=59.11 Aligned_cols=30 Identities=23% Similarity=0.318 Sum_probs=21.3
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ytm_A 15 CMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44 (46)
T ss_dssp BTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred CCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 445666677777777777777777777765
No 229
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.63 E-value=1.4e-08 Score=59.41 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=19.4
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ytk_A 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred CCcCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence 344556666666677777777777777664
No 230
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=98.63 E-value=1.5e-08 Score=59.28 Aligned_cols=28 Identities=29% Similarity=0.310 Sum_probs=14.2
Q ss_pred ccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 83 LCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
.|++.|.+.+.|..|+++|++++||+|.
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em9_A 17 ECGKSFRWASCLLKHQRVHSGEKPSGPS 44 (46)
T ss_dssp SSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred ccccccCChHHHHHHHHHhCCCCCCCCC
Confidence 3444444555555555555555555543
No 231
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.63 E-value=1.3e-08 Score=59.47 Aligned_cols=30 Identities=30% Similarity=0.375 Sum_probs=19.2
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emp_A 15 CNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred CCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 344555666666666777777777776664
No 232
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.63 E-value=1.4e-08 Score=59.42 Aligned_cols=29 Identities=21% Similarity=0.178 Sum_probs=15.6
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em5_A 16 HECGRGFTLKSHLNQHQRIHTGEKPSGPS 44 (46)
T ss_dssp SSSCCEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred CcCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence 33444555555555555555555555554
No 233
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.63 E-value=1.3e-08 Score=59.54 Aligned_cols=38 Identities=21% Similarity=0.287 Sum_probs=22.3
Q ss_pred hhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcC
Q 025404 33 HMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHC 72 (253)
Q Consensus 33 H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C 72 (253)
|+++ |+++++ .|+.|++.|.+.+.|..|+ ++||.|+.|
T Consensus 3 H~~~--H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytg_A 3 SGSS--GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp CCCC--CSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred CCCC--CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 5666 666666 6666666666666665555 345555443
No 234
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.63 E-value=1.3e-08 Score=58.92 Aligned_cols=37 Identities=19% Similarity=0.467 Sum_probs=31.9
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2yu5_A 7 GAGENPFKCSKCDRVFTQRNYLVQHERT--HARKSGPSSG 44 (44)
T ss_dssp CSCCCSEECSSSSCEESSSHHHHHHHHH--CCCCCSSCCC
T ss_pred cCCCCCeECCCCCchhCCHHHHHHHhHh--cCCCCCCCCC
Confidence 3578999999999999999999999999 888887 763
No 235
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.63 E-value=1.5e-08 Score=59.25 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=18.7
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ep2_A 15 CSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 344555566666666666666666666664
No 236
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=98.63 E-value=1.2e-08 Score=59.79 Aligned_cols=31 Identities=23% Similarity=0.256 Sum_probs=22.6
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ely_A 15 CVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred cCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4456667777778888888888888887753
No 237
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.63 E-value=1.5e-08 Score=59.30 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=15.2
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ysp_A 16 EKCGKGYNSKFNLDMHQKVHTGERPSGPS 44 (46)
T ss_dssp TTTTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred CCCCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence 34444555555555555555555555543
No 238
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.62 E-value=1.3e-08 Score=59.54 Aligned_cols=29 Identities=24% Similarity=0.386 Sum_probs=16.4
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2yu8_A 16 NECGKVFTQNSHLARHRRVHTGGKPSGPS 44 (46)
T ss_dssp SSSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred CcCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence 34445555555566666666666666554
No 239
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=98.62 E-value=7.7e-09 Score=62.91 Aligned_cols=28 Identities=21% Similarity=0.511 Sum_probs=22.6
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~ 108 (253)
|+.||+.|.+.+.|..|+++|++++||.
T Consensus 27 C~~C~k~f~~~~~L~~H~~~H~~~kp~~ 54 (54)
T 1yui_A 27 CPICYAVIRQSRNLRRHLELRHFAKPGV 54 (54)
T ss_dssp CTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred CCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence 4557777888888999999999988863
No 240
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.62 E-value=2.2e-08 Score=54.66 Aligned_cols=33 Identities=18% Similarity=0.306 Sum_probs=30.2
Q ss_pred CCCCcccccccccccCCHHHHHHhhhhcCCCCCcc
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (253)
++++||.|+.|++.|.....|..|+++ |++++|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--h~~~kp 35 (35)
T 2elx_A 3 SGSSGYVCALCLKKFVSSIRLRSHIRE--VHGAAQ 35 (35)
T ss_dssp CCCCSEECSSSCCEESSHHHHHHHHHH--TSCTTC
T ss_pred CCCCCeECCCCcchhCCHHHHHHHHHH--HcCCCC
Confidence 478999999999999999999999999 888764
No 241
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.62 E-value=1.6e-08 Score=59.10 Aligned_cols=30 Identities=20% Similarity=0.339 Sum_probs=20.1
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ytd_A 15 CSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred CCCCCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence 444556666677777777777777777765
No 242
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.62 E-value=1.7e-08 Score=59.05 Aligned_cols=30 Identities=27% Similarity=0.396 Sum_probs=19.8
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2en6_A 15 CNECGKTFSQKSILSAHQRTHTGEKPSGPS 44 (46)
T ss_dssp ETTTTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred CCCCCcccCchHHHHHHHHHcCCCCCCCCC
Confidence 445556666666677777777777777665
No 243
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.62 E-value=1.7e-08 Score=59.01 Aligned_cols=29 Identities=17% Similarity=0.355 Sum_probs=16.6
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eme_A 16 DYCGKAFGLSAELVRHQRIHTGEKPSGPS 44 (46)
T ss_dssp SSSCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred CCCChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence 34445555555666666666666666554
No 244
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.61 E-value=1.7e-08 Score=58.96 Aligned_cols=29 Identities=17% Similarity=-0.010 Sum_probs=15.7
Q ss_pred cccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
+.|++.|.+.+.|..|+++|++++||+|.
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2en8_A 16 DECGKNFCYISALRIHQRVHMGEKCSGPS 44 (46)
T ss_dssp TTTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred CCcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 33444555555555555555555555554
No 245
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.61 E-value=1.2e-08 Score=59.75 Aligned_cols=37 Identities=30% Similarity=0.555 Sum_probs=31.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
-++++||+|+.|++.|.....|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2emz_A 7 GSGERPFKCNECGKGFGRRSHLAGHLRL--HSREKSSGPS 44 (46)
T ss_dssp SSCCCSCCCSSSCCCCSSHHHHHHHHHH--HHHTTCCCSC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHH--hCCCCCCCCC
Confidence 3578899999999999999999999998 888887 775
No 246
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=98.61 E-value=2.4e-08 Score=54.59 Aligned_cols=33 Identities=21% Similarity=0.449 Sum_probs=30.3
Q ss_pred CCCCcccccccccccCCHHHHHHhhhhcCCCCCcc
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (253)
++++||+|+.|++.|.....|..|+++ |++++|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~~~ 35 (35)
T 1srk_A 3 SGKRPFVCRICLSAFTTKANCARHLKV--HTDTLS 35 (35)
T ss_dssp SCCSCEECSSSCCEESSHHHHHHHHGG--GTSCCC
T ss_pred CCCcCeeCCCCCcccCCHHHHHHHHHH--cCCCCC
Confidence 578999999999999999999999999 888764
No 247
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.61 E-value=1.8e-08 Score=58.92 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=20.3
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2enc_A 15 CEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred CCCCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence 444556666677777777777777777765
No 248
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.60 E-value=1.9e-08 Score=58.82 Aligned_cols=30 Identities=27% Similarity=0.245 Sum_probs=19.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||+|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yso_A 15 CRECGEIFFQYVSLIEHQVLHMGQKNSGPS 44 (46)
T ss_dssp CTTTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred ccccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 444556666667777777777777777664
No 249
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=98.60 E-value=2.6e-08 Score=56.00 Aligned_cols=33 Identities=21% Similarity=0.467 Sum_probs=30.9
Q ss_pred CCCCcccccccccccCCHHHHHHhhhhcCCCCCcc
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (253)
++++||.|+.|++.|...+.|..|+++ |+++++
T Consensus 2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~ 34 (39)
T 1njq_A 2 WPPRSYTCSFCKREFRSAQALGGHMNV--HRRDRA 34 (39)
T ss_dssp CCSSSEECTTTCCEESSHHHHHHHHHT--TCCSCT
T ss_pred CCCCceECCCCCcccCCHHHHHHHHHH--cCCCcc
Confidence 478999999999999999999999999 999887
No 250
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.60 E-value=1.6e-08 Score=59.13 Aligned_cols=30 Identities=23% Similarity=0.236 Sum_probs=20.5
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.||+.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2epw_A 15 CTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44 (46)
T ss_dssp CSSSCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred CCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence 444566666777777777777777777765
No 251
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=2.1e-08 Score=58.66 Aligned_cols=30 Identities=13% Similarity=0.066 Sum_probs=19.6
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em8_A 15 CVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred CcccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence 444556666666777777777777777664
No 252
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=2.9e-08 Score=57.47 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=31.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~~ 43 (44)
T 2epv_A 7 GSGEKPYECNECGKAFIWKSLLIVHERT--HAGVSGPSS 43 (44)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHGG--GSSCSCCCC
T ss_pred cCCCcCeECCCCCcccCchHHHHHHHhH--hcCCCCCCC
Confidence 4578999999999999999999999999 988877 54
No 253
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.59 E-value=2.4e-08 Score=55.35 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=30.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (253)
-++++||.|+.|++.|.....|..|+++ |++++|
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--h~~~kp 37 (37)
T 2elo_A 4 GSSGRSYSCPVCEKSFSEDRLIKSHIKT--NHPEVS 37 (37)
T ss_dssp CCCCCCCEETTTTEECSSHHHHHHHHHH--HCSSCC
T ss_pred CCCCCCcCCCCCCCccCCHHHHHHHHHH--HcCCCC
Confidence 3578999999999999999999999999 888764
No 254
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=2.4e-08 Score=58.39 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=18.6
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ep3_A 15 CAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred CCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 344555566666666666666666666664
No 255
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=98.58 E-value=2.4e-08 Score=58.43 Aligned_cols=30 Identities=20% Similarity=0.399 Sum_probs=18.8
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2el6_A 15 CSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44 (46)
T ss_dssp CSSSSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 344555666666666666666666666664
No 256
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=98.58 E-value=4.3e-09 Score=66.08 Aligned_cols=47 Identities=17% Similarity=0.303 Sum_probs=37.0
Q ss_pred HHHhhhhcCCCCCcc-ccccccccccCHHHHh-hhh-CCCCCCCcCCccccc
Q 025404 30 LIEHMKISYHSVHQP-KCAVCQKLSKSFESLR-EHL-TGPLSKAHCSGIFSD 78 (253)
Q Consensus 30 l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~-~H~-~~~~~C~~C~~~f~~ 78 (253)
|..|+++ |++++| .|+.||+.|.+.+.|. .|. ++||.|..|++.|..
T Consensus 2 L~~h~~~--H~~~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~ 51 (62)
T 1vd4_A 2 IETDERD--STNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEE 51 (62)
T ss_dssp CCCCSSS--CCSSSEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEE
T ss_pred hhhHHHH--cCCCCCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCcccc
Confidence 4568888 999999 9999999999988885 222 678888877777754
No 257
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.57 E-value=4.9e-08 Score=61.68 Aligned_cols=37 Identities=19% Similarity=0.199 Sum_probs=30.5
Q ss_pred CCCCCCCcCCcccccccccccccccCChHHHHHHH-HHccCCCCCCcc
Q 025404 64 TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHK-EACSLSAPVPFE 110 (253)
Q Consensus 64 ~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~-~~h~~~~~~~C~ 110 (253)
++||.|. .+.|+++|.+.++|..|+ ++|++++||.|.
T Consensus 25 EKPYkC~----------~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~ 62 (73)
T 1x3c_A 25 YRPYRCV----------HQGCFAAFTIQQNLILHYQAVHKSDLPAFSA 62 (73)
T ss_dssp SCSCBCC----------STTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred CCCeECC----------CCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence 5677763 245899999999999998 689999999875
No 258
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=4.3e-08 Score=55.95 Aligned_cols=30 Identities=17% Similarity=0.443 Sum_probs=26.0
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||+|+
T Consensus 13 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 42 (42)
T 2yte_A 13 CAECKETFSDNNRLVQHQKMHTVKSGPSSG 42 (42)
T ss_dssp CTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred CCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence 566778888899999999999999999886
No 259
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.54 E-value=1.5e-08 Score=59.22 Aligned_cols=36 Identities=19% Similarity=0.410 Sum_probs=29.6
Q ss_pred CCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccc
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (253)
++++||.|+.|++.|.....|..|+++ |+++++ .|+
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~ 44 (46)
T 2en3_A 8 TGEKPFQCKECGMNFSWSCSLFKHLRS--HERTDPSGPS 44 (46)
T ss_dssp CCCCSEECSSSCCEESSSHHHHHHHHH--HHHSCCSSCS
T ss_pred CCCCCeeCcccChhhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 478888888888888888888888888 887777 664
No 260
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.54 E-value=1.7e-08 Score=58.41 Aligned_cols=36 Identities=31% Similarity=0.469 Sum_probs=30.3
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (253)
-++++||+|+.|++.|.....|..|+++ |++++| .|
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C 43 (44)
T 2eox_A 7 GTDSKSYNCNECGKAFTRIFHLTRHQKI--HTRKSGPSS 43 (44)
T ss_dssp CCCCCCEEETTTTEEESSSHHHHTTHHH--HCCCCCCSC
T ss_pred CCCCCCeECcccCcccCCHHHHHHHHHH--hCCCCCCCC
Confidence 3578889999999999999999999988 888777 66
No 261
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.54 E-value=1e-08 Score=69.15 Aligned_cols=42 Identities=14% Similarity=0.355 Sum_probs=37.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCcc-cccccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKL 52 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~ 52 (253)
-++++||.|+.|++.|.....|..|+++ |++++| +|..|.+.
T Consensus 20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~--Ht~ekp~~C~~~~~~ 62 (88)
T 1x6f_A 20 RLQNSTYQCKHCDSKLQSTAELTSHLNI--HNEEFQKRAKRQERR 62 (88)
T ss_dssp CCCCSCEECSSSCCEESSHHHHHHHHHH--HHHHHHHHCCCCSCC
T ss_pred cCCCCCCcCCCCCCEeCCHHHHHHHHHH--hCCCCCcccchhhhH
Confidence 4579999999999999999999999999 999999 99877543
No 262
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.52 E-value=4.3e-08 Score=57.27 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=22.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em2_A 15 CKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred CCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4556667777778888888888888887753
No 263
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.51 E-value=5e-08 Score=57.18 Aligned_cols=31 Identities=26% Similarity=0.309 Sum_probs=22.2
Q ss_pred ccccccccCChHHHHHHHH-HccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKE-ACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~-~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|++ +|++++||.|..
T Consensus 15 C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~ 46 (47)
T 2epx_A 15 CIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46 (47)
T ss_dssp CSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred CCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence 4456667777777888887 788888887753
No 264
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.51 E-value=6.3e-08 Score=53.27 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=29.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
-++++||+|+.|++.|.....|..|+++ |++++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~k 36 (36)
T 2elv_A 4 GSSGLLYDCHICERKFKNELDRDRHMLV--HGDKW 36 (36)
T ss_dssp SCCCCCEECSSSCCEESSHHHHHHHHTT--TSTTC
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHH--hcCCC
Confidence 4578999999999999999999999999 88753
No 265
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.49 E-value=7.6e-08 Score=60.96 Aligned_cols=41 Identities=22% Similarity=0.277 Sum_probs=35.1
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCccccccccc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQK 51 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~~C~~C~~ 51 (253)
-+++|||+|..|+|.|.....|..|+++ |+++...+..++.
T Consensus 8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~--Htg~~~~~~~~~~ 48 (66)
T 2epp_A 8 LREAGILPCGLCGKVFTDANRLRQHEAQ--HGVTSLQLGYIDL 48 (66)
T ss_dssp CCCCCCCCCTTTCCCCSCHHHHHHHHHH--HTTTSCCCCSCCC
T ss_pred CCCccCcCCCCCCCccCCHHHHHhhhhh--hCCCccccccccC
Confidence 4578999999999999999999999999 9987666665543
No 266
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=98.49 E-value=5.6e-08 Score=52.53 Aligned_cols=30 Identities=33% Similarity=0.703 Sum_probs=28.1
Q ss_pred CcccccccccccCCHHHHHHhhhhcCCCCCcc
Q 025404 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (253)
|||.|+.|++.|...+.|..|+++ |+++++
T Consensus 1 kp~~C~~C~k~F~~~~~L~~H~~~--H~~~~~ 30 (33)
T 1rim_A 1 YKFACPECPKRFMRSDHLSKHITL--HELLGE 30 (33)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHHHH--HTTTCC
T ss_pred CcccCCCCCchhCCHHHHHHHHHH--hCCCCC
Confidence 689999999999999999999999 998876
No 267
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.48 E-value=8.9e-08 Score=55.88 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=26.5
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoh_A 15 CKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred CCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4567788889999999999999999999864
No 268
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.48 E-value=8.8e-08 Score=52.66 Aligned_cols=33 Identities=30% Similarity=0.438 Sum_probs=29.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
.++++||+|+.|++.|.....|..|+++ |++++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~k 36 (36)
T 2elq_A 4 GSSGKPFKCSLCEYATRSKSNLKAHMNR--HSTEK 36 (36)
T ss_dssp SCCCCSEECSSSSCEESCHHHHHHHHHH--SSTTC
T ss_pred CCCCCCccCCCCCchhCCHHHHHHHHHH--hccCC
Confidence 4588999999999999999999999999 88753
No 269
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.47 E-value=9.4e-08 Score=54.97 Aligned_cols=30 Identities=27% Similarity=0.383 Sum_probs=26.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 13 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 42 (43)
T 2yrm_A 13 CNECDCRFSEEASLKRHTLQTHSDKSGPSS 42 (43)
T ss_dssp CSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred CCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence 566788889999999999999999999985
No 270
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.46 E-value=9.5e-08 Score=55.17 Aligned_cols=30 Identities=27% Similarity=0.388 Sum_probs=25.8
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||+|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (44)
T 2eou_A 15 CQECGKIFRHSSLLIEHQALHAGESGPSSG 44 (44)
T ss_dssp CTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred CCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence 566778888899999999999999999884
No 271
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.46 E-value=1.2e-07 Score=51.99 Aligned_cols=33 Identities=33% Similarity=0.512 Sum_probs=29.8
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
.++++||.|+.|++.|.....|..|+++ |++++
T Consensus 4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~--H~~ek 36 (36)
T 2elr_A 4 GSSGKTHLCDMCGKKFKSKGTLKSHKLL--HTADG 36 (36)
T ss_dssp CCCCSSCBCTTTCCBCSSHHHHHHHHHH--HSSCC
T ss_pred CCCCCCeecCcCCCCcCchHHHHHHHHH--hcCCC
Confidence 4578999999999999999999999999 88763
No 272
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=98.46 E-value=6.2e-08 Score=62.38 Aligned_cols=40 Identities=15% Similarity=0.294 Sum_probs=23.8
Q ss_pred cccccCChHHHHHHHHHccCCCCCC-----ccccCccchhhhhhc
Q 025404 84 CMNIFDSPSSLIKHKEACSLSAPVP-----FEKTLSNAESQKKIS 123 (253)
Q Consensus 84 C~k~f~~~~~l~~H~~~h~~~~~~~-----C~~~f~~~~~l~~h~ 123 (253)
|++.|.....|..|+++|++++||. |++.|.....|..|+
T Consensus 25 C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~ 69 (72)
T 2epa_A 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR 69 (72)
T ss_dssp TCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred CccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence 5556666666666666666666553 445566666666665
No 273
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.46 E-value=1e-07 Score=55.60 Aligned_cols=30 Identities=23% Similarity=0.419 Sum_probs=26.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eom_A 15 CSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred CCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence 566788889999999999999999999986
No 274
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.45 E-value=9.9e-08 Score=54.99 Aligned_cols=30 Identities=23% Similarity=0.445 Sum_probs=24.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eof_A 15 CNECQKAFNTKSNLMVHQRTHTGESGPSSG 44 (44)
T ss_dssp CTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred CCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence 556777888888899999999999998874
No 275
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.45 E-value=1.2e-07 Score=52.04 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=29.7
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
.++++||+|+.|++.|.....|..|+++ |++++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~k 36 (36)
T 2elt_A 4 GSSGKPYKCPQCSYASAIKANLNVHLRK--HTGEK 36 (36)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHHHH--HTCCC
T ss_pred CCCCCCCCCCCCCcccCCHHHHHHHHHH--ccCCC
Confidence 4588999999999999999999999999 88753
No 276
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=98.45 E-value=1.3e-07 Score=52.28 Aligned_cols=32 Identities=31% Similarity=0.556 Sum_probs=28.1
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCC
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~ 42 (253)
-++++||+|+.|++.|.....|..|+++ |+++
T Consensus 6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 37 (37)
T 1p7a_A 6 STGIKPFQCPDCDRSFSRSDHLALHRKR--HMLV 37 (37)
T ss_dssp TCCSSSBCCTTTCCCBSSHHHHHHHHGG--GTCC
T ss_pred CCCCCCccCCCCCcccCcHHHHHHHHHH--hccC
Confidence 4578999999999999999999999998 8763
No 277
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=98.45 E-value=8.1e-08 Score=54.81 Aligned_cols=30 Identities=20% Similarity=0.372 Sum_probs=24.4
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 13 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 42 (42)
T 2el5_A 13 CSECGKAFNRKDQLISHQRTHAGESGPSSG 42 (42)
T ss_dssp CSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred CCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence 556777788888888888888888888875
No 278
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.44 E-value=8.8e-08 Score=55.87 Aligned_cols=30 Identities=27% Similarity=0.424 Sum_probs=20.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ep0_A 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHTTTSSSCCCSCC
T ss_pred CcccCcccCChHHHHHHHHHhCCCCCCCCC
Confidence 455666667777777777777777777765
No 279
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.44 E-value=9.9e-08 Score=55.64 Aligned_cols=31 Identities=26% Similarity=0.503 Sum_probs=24.1
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2enf_A 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred CCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence 4556677778888888888888888888864
No 280
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.44 E-value=1.1e-07 Score=52.31 Aligned_cols=33 Identities=33% Similarity=0.520 Sum_probs=29.6
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhhcCCCCCc
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
.++++||+|+.|++.|.....|..|+++ |++++
T Consensus 4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~k 36 (36)
T 2els_A 4 GSSGKIFTCEYCNKVFKFKHSLQAHLRI--HTNEK 36 (36)
T ss_dssp TSCCCCEECTTTCCEESSHHHHHHHHHH--HCCCC
T ss_pred CCCCCCEECCCCCceeCCHHHHHHHHHH--hCCCC
Confidence 4578999999999999999999999999 88753
No 281
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.44 E-value=5.9e-08 Score=56.05 Aligned_cols=30 Identities=20% Similarity=0.316 Sum_probs=24.4
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eox_A 15 CNECGKAFTRIFHLTRHQKIHTRKSGPSSG 44 (44)
T ss_dssp ETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred CcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 566777788888888888888888888875
No 282
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.43 E-value=1.1e-07 Score=55.48 Aligned_cols=30 Identities=20% Similarity=0.305 Sum_probs=21.4
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytt_A 15 CSECGKSFSGSYRLTQHWITHTREKPSGPS 44 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 445666677777777777777777777765
No 283
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.43 E-value=1.1e-07 Score=55.45 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=24.0
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq2_A 15 CNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4556677778888888888888888888864
No 284
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.43 E-value=1.2e-07 Score=55.38 Aligned_cols=31 Identities=26% Similarity=0.465 Sum_probs=22.5
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|.-
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eon_A 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45 (46)
T ss_dssp CSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred CCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence 4456667777777888888888888887753
No 285
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.43 E-value=1.5e-07 Score=55.52 Aligned_cols=30 Identities=30% Similarity=0.471 Sum_probs=16.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|..|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (48)
T 2epr_A 15 CEICGKIFRDVYHLNRHKLSHSGEKPYSSG 44 (48)
T ss_dssp ETTTTEEESSHHHHHHHGGGSCSCCCCCSC
T ss_pred CCCCCcccCCHHHHHHHHHhcCCCCCccCC
Confidence 444555555555566666666666655543
No 286
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.43 E-value=1.4e-07 Score=54.71 Aligned_cols=31 Identities=16% Similarity=0.166 Sum_probs=22.6
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|+++++|.|..
T Consensus 13 C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~ 43 (45)
T 2epq_A 13 CPVCGLRFKRKDRMSYHVRSHDGSVGKSGPS 43 (45)
T ss_dssp ETTTTEECSCHHHHHHHHHHHSCCCCCCCCC
T ss_pred CCCCCcccCCHHHHHHHHHHccCCCCCCCcC
Confidence 5556677777777777777777777777653
No 287
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.42 E-value=1e-07 Score=54.92 Aligned_cols=30 Identities=20% Similarity=0.378 Sum_probs=21.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||+|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eoj_A 15 CCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44 (44)
T ss_dssp ETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred CCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence 455666777777777787778888887774
No 288
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.42 E-value=1e-07 Score=55.61 Aligned_cols=31 Identities=29% Similarity=0.423 Sum_probs=24.8
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em4_A 15 CIECGKAFKTKSSLICHRRSHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred CCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 4556777788888888888888888888864
No 289
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=98.42 E-value=9.9e-08 Score=55.67 Aligned_cols=31 Identities=23% Similarity=0.339 Sum_probs=24.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||+|.-
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emj_A 15 CAECGKSFSISSQLATHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4556777788888888888888888888864
No 290
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.42 E-value=1e-07 Score=55.58 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=23.5
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytp_A 15 CSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred CCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4556677777888888888888888888764
No 291
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.42 E-value=1.3e-07 Score=55.18 Aligned_cols=31 Identities=23% Similarity=0.440 Sum_probs=24.2
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|+-
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2emg_A 15 CSECGKVFTHKTNLIIHQKIHTGERPSGPSS 45 (46)
T ss_dssp CTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred CCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4556777778888888888888888888763
No 292
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.42 E-value=1.1e-07 Score=55.39 Aligned_cols=31 Identities=26% Similarity=0.461 Sum_probs=24.8
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yti_A 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred CCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence 4556777788888888888888888888864
No 293
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.42 E-value=8.7e-08 Score=55.63 Aligned_cols=30 Identities=20% Similarity=0.419 Sum_probs=26.3
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||+|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (45)
T 2epu_A 15 CTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44 (45)
T ss_dssp ETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred CCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence 677888888999999999999999999885
No 294
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.42 E-value=1.3e-07 Score=55.19 Aligned_cols=31 Identities=23% Similarity=0.420 Sum_probs=24.2
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em6_A 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4556677778888888888888888888864
No 295
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.42 E-value=1.2e-07 Score=55.26 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=24.3
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|..|++.|.+.+.|..|+++|++++||.|+-
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~ 45 (46)
T 2eor_A 15 CEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred CCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence 4556777778888888888888888888864
No 296
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.42 E-value=1.2e-07 Score=55.32 Aligned_cols=31 Identities=26% Similarity=0.363 Sum_probs=22.5
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~ 45 (46)
T 2yts_A 15 CNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred CCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence 4556667777777778887888888887753
No 297
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.41 E-value=1.3e-07 Score=54.55 Aligned_cols=30 Identities=17% Similarity=0.407 Sum_probs=24.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2yu5_A 15 CSKCDRVFTQRNYLVQHERTHARKSGPSSG 44 (44)
T ss_dssp CSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred CCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence 556777888888999999999999998874
No 298
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.41 E-value=1.2e-07 Score=55.31 Aligned_cols=31 Identities=32% Similarity=0.418 Sum_probs=24.8
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|.-
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eow_A 15 CNECGKAFRARSSLAIHQATHSGEKPSGPSS 45 (46)
T ss_dssp CTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred ccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence 5557777788888888888888888888864
No 299
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.41 E-value=1.3e-07 Score=55.15 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=24.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ep1_A 15 CSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred CCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4556777788888888888888888888864
No 300
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.41 E-value=1.2e-07 Score=55.30 Aligned_cols=31 Identities=19% Similarity=0.461 Sum_probs=25.2
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em3_A 15 CKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5557777888888888998999999988864
No 301
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.41 E-value=1.4e-07 Score=55.01 Aligned_cols=31 Identities=29% Similarity=0.439 Sum_probs=25.6
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en9_A 15 CNECKKTFTQSSSLTVHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred CCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4557778888889999999999999998864
No 302
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.41 E-value=1.3e-07 Score=53.92 Aligned_cols=29 Identities=31% Similarity=0.470 Sum_probs=20.3
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C 109 (253)
|+.|++.|.+.+.|..|+++|++++||.|
T Consensus 14 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2ytb_A 14 CDQCGKAFSQKGSLIVHIRVHTGSGPSSG 42 (42)
T ss_dssp CTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred CCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence 44466666677777777777777777765
No 303
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.41 E-value=1.3e-07 Score=55.15 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=24.3
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq1_A 15 CNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 45 (46)
T ss_dssp CTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred CCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4556677778888888888888888888864
No 304
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=98.41 E-value=1.5e-07 Score=49.10 Aligned_cols=30 Identities=17% Similarity=0.432 Sum_probs=27.3
Q ss_pred CCcccccccccccCCHHHHHHhhhhcCCCCCc
Q 025404 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
++||.|+.|++.|.....|..|+++ |++++
T Consensus 1 ~k~~~C~~C~~~f~~~~~l~~H~~~--h~~~k 30 (30)
T 2m0d_A 1 MKPYQCDYCGRSFSDPTSKMRHLET--HDTDK 30 (30)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHT--TCCCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHH--hccCC
Confidence 5899999999999999999999999 88753
No 305
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.41 E-value=1.1e-07 Score=52.72 Aligned_cols=31 Identities=26% Similarity=0.263 Sum_probs=27.9
Q ss_pred CCCCcccccccccccCCHHHHHHh-hhhcCCCCC
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEH-MKISYHSVH 42 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H-~~~~~H~~~ 42 (253)
++++||+|+.|++.|.....|..| +++ |+++
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~--H~~~ 36 (37)
T 2elm_A 5 SSGHLYYCSQCHYSSITKNCLKRHVIQK--HSNI 36 (37)
T ss_dssp SSSCEEECSSSSCEEECHHHHHHHHHHH--TCCC
T ss_pred CCCcCeECCCCCcccCCHHHHHHHHHHH--ccCc
Confidence 578999999999999999999999 888 8764
No 306
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.40 E-value=9.2e-08 Score=54.30 Aligned_cols=29 Identities=28% Similarity=0.389 Sum_probs=24.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C 109 (253)
|+.|++.|.+.+.|..|+++|++++||.|
T Consensus 13 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C 41 (41)
T 2ept_A 13 CQECGKSFRQKGSLTLHERIHTGSGPSSG 41 (41)
T ss_dssp CSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred CCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence 66677888889999999999999999876
No 307
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.4e-07 Score=54.99 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=24.6
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yth_A 15 CEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred CCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 4556777788888888888888888888864
No 308
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.3e-07 Score=55.17 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=23.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emi_A 15 CSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred CCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence 4556677778888888888888888888763
No 309
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.3e-07 Score=55.11 Aligned_cols=31 Identities=19% Similarity=0.372 Sum_probs=23.1
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yrj_A 15 CGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred CCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4556677777788888888888888887763
No 310
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=98.39 E-value=1.8e-07 Score=50.47 Aligned_cols=28 Identities=25% Similarity=0.309 Sum_probs=25.5
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~ 108 (253)
|+.||+.|.+.+.|..|+++|++++||.
T Consensus 5 C~~C~k~F~~~~~L~~H~~~H~~~~~~~ 32 (33)
T 1rim_A 5 CPECPKRFMRSDHLSKHITLHELLGEER 32 (33)
T ss_dssp CSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred CCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence 6778899999999999999999999974
No 311
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=1.3e-07 Score=53.94 Aligned_cols=29 Identities=24% Similarity=0.254 Sum_probs=22.7
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C 109 (253)
|+.|++.|.+.+.|..|+++|++++||.|
T Consensus 14 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2en2_A 14 CETCGARFVQVAHLRAHVLIHTGSGPSSG 42 (42)
T ss_dssp CTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred CCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence 45567777788888888888888888876
No 312
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=1.3e-07 Score=55.02 Aligned_cols=31 Identities=26% Similarity=0.487 Sum_probs=24.7
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytf_A 15 CSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5556777788888888888888888888864
No 313
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=98.39 E-value=1.4e-07 Score=52.28 Aligned_cols=33 Identities=24% Similarity=0.541 Sum_probs=29.5
Q ss_pred CCCCCccccc--ccccccCCHHHHHHhhhhcCCCCCc
Q 025404 9 KRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 9 ~~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
.++++||.|. .|++.|...+.|..|+++ |++++
T Consensus 3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H~~ek 37 (37)
T 1va1_A 3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRW--HTGER 37 (37)
T ss_dssp SSSCCCEECCSTTCCCEESCHHHHHHHHHH--HHTTC
T ss_pred CCCCCCCCCCCCCCCCccCCHHHHHHHHHh--cCCCC
Confidence 5689999998 599999999999999999 88763
No 314
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=98.39 E-value=2.8e-08 Score=60.34 Aligned_cols=40 Identities=25% Similarity=0.419 Sum_probs=25.4
Q ss_pred cccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh
Q 025404 22 KQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (253)
Q Consensus 22 k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (253)
|.|.....|..|+++ |+++++ .|+.|++.|.+.++|..|+
T Consensus 4 k~~~~~~~l~~h~~~--H~~~k~~~C~~C~k~f~~~~~L~~H~ 44 (54)
T 1yui_A 4 KRAKHPPGTEKPRSR--SQSEQPATCPICYAVIRQSRNLRRHL 44 (54)
T ss_dssp CCCSCSSCCCCCHHH--HTSSCCEECTTTCCEESSHHHHHHHH
T ss_pred cccCCCcchhhHHHh--cCCCCCccCCCCCcccCCHHHHHHHH
Confidence 445555566666666 666666 6666666666666666665
No 315
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.39 E-value=1.4e-07 Score=53.82 Aligned_cols=29 Identities=24% Similarity=0.380 Sum_probs=22.4
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C 109 (253)
|+.|++.|.+.+.|..|+++|++++||+|
T Consensus 14 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2eos_A 14 CEICGTRFRHLQTLKSHLRIHTGSGPSSG 42 (42)
T ss_dssp CSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred CCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence 45566777788888888888888888876
No 316
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.38 E-value=1.4e-07 Score=54.98 Aligned_cols=31 Identities=19% Similarity=0.286 Sum_probs=24.5
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|+-
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eoz_A 15 CNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45 (46)
T ss_dssp ETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred CcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5567777788888888888888888888863
No 317
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.38 E-value=1.5e-07 Score=54.15 Aligned_cols=30 Identities=30% Similarity=0.363 Sum_probs=24.0
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2en7_A 15 CNECGKAFRSKSYLIIHTRTHTGESGPSSG 44 (44)
T ss_dssp CTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred CCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence 455677778888888888888888888874
No 318
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=98.38 E-value=1.5e-07 Score=55.56 Aligned_cols=33 Identities=21% Similarity=0.340 Sum_probs=28.4
Q ss_pred CCCCcccccccccccCCHHHHHHhhh-hcCCCCCcc
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQP 44 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~H~~~~~ 44 (253)
+++|||.|..|++.|.....|..|++ + |+++..
T Consensus 3 t~~kp~~C~~C~k~F~~~~~L~~H~~~~--H~~e~~ 36 (48)
T 3iuf_A 3 DRDKPYACDICGKRYKNRPGLSYHYAHS--HLAEEE 36 (48)
T ss_dssp TTTSCEECTTTCCEESSHHHHHHHHHHS--SCC---
T ss_pred CCCcCEECCCcCcccCCHHHHHHHhhhh--cCCCCC
Confidence 57999999999999999999999999 8 988765
No 319
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.38 E-value=1.5e-07 Score=54.34 Aligned_cols=30 Identities=27% Similarity=0.260 Sum_probs=24.3
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g 44 (44)
T 2epv_A 15 CNECGKAFIWKSLLIVHERTHAGVSGPSSG 44 (44)
T ss_dssp CSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred CCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence 556777788888888999999998888764
No 320
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=98.37 E-value=1.6e-07 Score=48.09 Aligned_cols=27 Identities=26% Similarity=0.406 Sum_probs=24.9
Q ss_pred CCcccccccccccCCHHHHHHhhhhcCCC
Q 025404 12 TARHKCVACYKQFKRKDHLIEHMKISYHS 40 (253)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~ 40 (253)
++||+|+.|++.|...+.|..|+++ |+
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~--H~ 27 (27)
T 2kvg_A 1 AAPYRCPLCRAGCPSLASMQAHMRG--HS 27 (27)
T ss_dssp CCTEEETTTTEEESCHHHHHHHHTT--CC
T ss_pred CcCcCCCCCCcccCCHHHHHHHHHh--cC
Confidence 5799999999999999999999998 74
No 321
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.37 E-value=1.8e-07 Score=54.47 Aligned_cols=31 Identities=29% Similarity=0.419 Sum_probs=23.5
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq3_A 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45 (46)
T ss_dssp ETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred CCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5556677777788888888888888888763
No 322
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=98.36 E-value=1.6e-07 Score=53.49 Aligned_cols=29 Identities=34% Similarity=0.613 Sum_probs=24.6
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C 109 (253)
|+.|++.|.+.+.|..|+++|++++||.|
T Consensus 14 C~~C~k~f~~~~~l~~H~~~H~~~k~~~C 42 (42)
T 2epc_A 14 CGQCGKSFTQRGSLAVHQRSCSQSGPSSG 42 (42)
T ss_dssp CSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred CCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence 56677788888999999999999999886
No 323
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=1.4e-07 Score=54.98 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=24.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yto_A 15 CSDCGKAFTRKSGLHIHQQSHTGERHSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred CcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence 4556777788888888888888888888864
No 324
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=98.36 E-value=2e-07 Score=47.91 Aligned_cols=28 Identities=25% Similarity=0.526 Sum_probs=25.7
Q ss_pred CCcccccccccccCCHHHHHHhhhhcCCCC
Q 025404 12 TARHKCVACYKQFKRKDHLIEHMKISYHSV 41 (253)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~ 41 (253)
++||+|+.|++.|.....|..|+++ |++
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~--h~~ 28 (28)
T 2kvf_A 1 MRPYSCSVCGKRFSLKHQMETHYRV--HTG 28 (28)
T ss_dssp CCSEECSSSCCEESCHHHHHHHHTT--SCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHh--cCC
Confidence 5799999999999999999999998 764
No 325
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.36 E-value=1e-07 Score=52.69 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=28.8
Q ss_pred CCCCcccccccccccCCH-HHHHHhhhhcCCCCCc
Q 025404 10 RSTARHKCVACYKQFKRK-DHLIEHMKISYHSVHQ 43 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~-~~l~~H~~~~~H~~~~ 43 (253)
++++||+|+.|++.|... ..|..|+++ |++++
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~~L~~H~~~--H~~~k 37 (37)
T 2elp_A 5 SSGRAMKCPYCDFYFMKNGSDLQRHIWA--HEGVK 37 (37)
T ss_dssp CCCCCEECSSSSCEECSSCHHHHHHHHH--HHTCC
T ss_pred CCCCCeECCCCChhhccCHHHHHHHHHh--cCCCC
Confidence 578999999999999999 999999999 87753
No 326
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2e-07 Score=54.33 Aligned_cols=31 Identities=26% Similarity=0.247 Sum_probs=24.8
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emz_A 15 CNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4556677788888888888888888888864
No 327
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=98.35 E-value=2.1e-07 Score=47.50 Aligned_cols=27 Identities=15% Similarity=0.445 Sum_probs=25.0
Q ss_pred CCcccccccccccCCHHHHHHhhhhcCCC
Q 025404 12 TARHKCVACYKQFKRKDHLIEHMKISYHS 40 (253)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~ 40 (253)
++||.|+.|++.|.....|..|+++ |+
T Consensus 1 ek~~~C~~C~k~f~~~~~l~~H~~~--H~ 27 (27)
T 2kvh_A 1 EKPFSCSLCPQRSRDFSAMTKHLRT--HG 27 (27)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHH--CC
T ss_pred CcCccCCCcChhhCCHHHHHHHHHH--cc
Confidence 5899999999999999999999998 74
No 328
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.35 E-value=2e-07 Score=53.75 Aligned_cols=30 Identities=20% Similarity=0.423 Sum_probs=22.8
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2emb_A 15 CSKCQATFNLRKHLIQHQKTHAAKSGPSSG 44 (44)
T ss_dssp CTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred CCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence 455667777788888888888888888774
No 329
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=98.35 E-value=1.9e-07 Score=51.50 Aligned_cols=28 Identities=25% Similarity=0.382 Sum_probs=24.9
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhh
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKI 36 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (253)
..+||||+|+.|+|.|.+++.|..|+..
T Consensus 3 ~~gekp~~C~~CgK~F~~~s~L~~H~py 30 (36)
T 1fv5_A 3 LLKPARFMCLPCGIAFSSPSTLEAHQAY 30 (36)
T ss_dssp SSSCCCCEETTTTEECSCHHHHHHHHHH
T ss_pred CCCccCeECCCCCCccCCHhHccCcCCe
Confidence 4589999999999999999999999854
No 330
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.35 E-value=2.1e-07 Score=54.25 Aligned_cols=31 Identities=26% Similarity=0.490 Sum_probs=25.0
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2enh_A 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45 (46)
T ss_dssp CTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred CCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4557777888888888888888888888864
No 331
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=98.34 E-value=3.1e-08 Score=53.12 Aligned_cols=30 Identities=33% Similarity=0.523 Sum_probs=27.9
Q ss_pred CcccccccccccCCHHHHHHhhhhcCCCCCcc
Q 025404 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (253)
+||+|+.|++.|...+.|..|+++ |++++|
T Consensus 1 kp~~C~~C~k~f~~~~~L~~H~~~--H~~~kp 30 (32)
T 2kfq_A 1 YAFACPACPKRFMRSDALSKHIKT--AFIVVA 30 (32)
T ss_dssp CCSSSSSSCTTHHHHHTTSSSTTS--SSSSSS
T ss_pred CCCCCCCCCcccCCHHHHHHHHHH--HccCCC
Confidence 689999999999999999999999 998875
No 332
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.34 E-value=3.5e-08 Score=64.44 Aligned_cols=39 Identities=18% Similarity=0.223 Sum_probs=17.9
Q ss_pred CCCcccccccccccCCHHHHHHhhhhcCCCCCcc-ccccccccc
Q 025404 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLS 53 (253)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f 53 (253)
+++|+.|+.|++.|. ...|..|+ . |.++++ .|+.|++.|
T Consensus 14 ~~r~~~C~~C~~~~~-~~~L~~H~-~--~c~~~~~~C~~C~~~~ 53 (75)
T 2d9k_A 14 PLRLAVCQHCDLELS-ILKLKEHE-D--YCGARTELCGNCGRNV 53 (75)
T ss_dssp CCCCEECSSSCCEEC-HHHHHHHH-H--HHHHCEEECSSSCCEE
T ss_pred CCcccCCcccChHhh-HHHHHHHH-h--HcCCCceEcccCCCcC
Confidence 444555555555442 44445554 4 444444 444444433
No 333
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.32 E-value=1.9e-07 Score=54.39 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=23.2
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
|+.|++.|.+.+.|..|+++|++++||.|..
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2en3_A 15 CKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45 (46)
T ss_dssp CSSSCCEESSSHHHHHHHHHHHHSCCSSCSC
T ss_pred CcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4556667777788888888888888888764
No 334
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.32 E-value=2.1e-07 Score=51.79 Aligned_cols=33 Identities=24% Similarity=0.489 Sum_probs=29.7
Q ss_pred CCCCccccc--ccccccCCHHHHHHhhhhcCCCCCcc
Q 025404 10 RSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP 44 (253)
Q Consensus 10 ~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (253)
++++||.|. .|++.|...+.|..|+++ |+++++
T Consensus 2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~k~ 36 (38)
T 1bhi_A 2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHK--HEMTLK 36 (38)
T ss_dssp TTCCCEECCCTTTCCEESSHHHHHHHHHH--HHTTTT
T ss_pred CCCcceECCCCCCCcccCCHHHHHHHHHH--hCCCCC
Confidence 478999999 699999999999999999 888765
No 335
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=98.32 E-value=2.9e-07 Score=47.58 Aligned_cols=29 Identities=28% Similarity=0.654 Sum_probs=26.4
Q ss_pred CcccccccccccCCHHHHHHhhhhcCCCCCc
Q 025404 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
+||.|+.|++.|.....|..|+++ |++++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~--h~~~k 29 (29)
T 1ard_A 1 RSFVCEVCTRAFARQEHLKRHYRS--HTNEK 29 (29)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHH--HSCCC
T ss_pred CCeECCCCCcccCCHHHHHHHHHH--hcCCC
Confidence 589999999999999999999999 87753
No 336
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=98.32 E-value=2e-07 Score=48.33 Aligned_cols=29 Identities=34% Similarity=0.687 Sum_probs=26.5
Q ss_pred CcccccccccccCCHHHHHHhhhhcCCCCCc
Q 025404 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
+||.|+.|++.|.....|..|+++ |++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~--H~~~k 29 (29)
T 1rik_A 1 YKFACPECPKRFMRSDHLTLHILL--HENKK 29 (29)
T ss_dssp CCEECSSSSCEESCSHHHHHHHTG--GGSCC
T ss_pred CCccCCCCCchhCCHHHHHHHHHH--hcCCC
Confidence 689999999999999999999999 88753
No 337
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=98.30 E-value=2.9e-07 Score=48.95 Aligned_cols=30 Identities=33% Similarity=0.533 Sum_probs=27.3
Q ss_pred CCccccc--ccccccCCHHHHHHhhhhcCCCCCc
Q 025404 12 TARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 12 ~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
++||.|+ .|++.|...+.|..|+++ |++++
T Consensus 1 ek~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~~ 32 (32)
T 1zfd_A 1 DRPYSCDHPGCDKAFVRNHDLIRHKKS--HQEKA 32 (32)
T ss_dssp CCSBCCCCTTCCCCBSSSHHHHHHHGG--GTCCC
T ss_pred CCCCcCcCCCCCCccCCHHHHHHHHHH--ccCCC
Confidence 5899999 899999999999999999 88763
No 338
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=98.29 E-value=4.5e-07 Score=47.86 Aligned_cols=29 Identities=31% Similarity=0.584 Sum_probs=26.5
Q ss_pred Cccccc--ccccccCCHHHHHHhhhhcCCCCCc
Q 025404 13 ARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 13 k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
+||.|+ .|++.|...+.|..|+++ |++++
T Consensus 1 kp~~C~~~~C~k~f~~~~~L~~H~~~--H~~~k 31 (31)
T 1sp2_A 1 RPFMCTWSYCGKRFTRSDELQRHKRT--HTGEK 31 (31)
T ss_dssp CCCBCCSTTCCCBCSSHHHHHHHHTT--TSCCC
T ss_pred CCcCCcCCCCCcccCCHhHHHHHHHH--hcCCC
Confidence 689998 999999999999999999 98763
No 339
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.29 E-value=2.3e-07 Score=54.03 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=25.4
Q ss_pred ccccccccCChHHHHHHHHHccC-CCCCCcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSL-SAPVPFE 110 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~-~~~~~C~ 110 (253)
|+.|++.|.+.+.|..|+++|++ ++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~ 45 (46)
T 2eoy_A 15 CNKCEKTFSCSKYLTQHERIHTRGVKSGPSS 45 (46)
T ss_dssp CSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred CcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence 55677788888999999999999 9999885
No 340
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.29 E-value=2.9e-07 Score=59.98 Aligned_cols=62 Identities=18% Similarity=0.169 Sum_probs=50.8
Q ss_pred HHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh----CCCCCCCcCCcccccccccccccccCChHHHHHHHHHccC
Q 025404 29 HLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSL 103 (253)
Q Consensus 29 ~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~----~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~ 103 (253)
.|..|+++ |.+.++ .|..|++.|. .+.|..|+ ++++.| +.|++.|. ...|..|+++|.+
T Consensus 4 ~L~~H~~~--~c~~r~~~C~~C~~~~~-~~~L~~H~~~c~~~~~~C------------~~C~~~~~-~~~l~~H~~~c~~ 67 (75)
T 2d9k_A 4 GSSGHEET--ECPLRLAVCQHCDLELS-ILKLKEHEDYCGARTELC------------GNCGRNVL-VKDLKTHPEVCGR 67 (75)
T ss_dssp CCSCCCCC--CCCCCCEECSSSCCEEC-HHHHHHHHHHHHHCEEEC------------SSSCCEEE-TTGGGTHHHHBTT
T ss_pred HHHhhCcc--cCCCcccCCcccChHhh-HHHHHHHHhHcCCCceEc------------ccCCCcCc-HHHHHHHHHHccC
Confidence 46778888 999999 9999999995 89999997 567765 44666666 4889999999988
Q ss_pred CCC
Q 025404 104 SAP 106 (253)
Q Consensus 104 ~~~ 106 (253)
++.
T Consensus 68 ~~~ 70 (75)
T 2d9k_A 68 EGS 70 (75)
T ss_dssp BSS
T ss_pred CcC
Confidence 753
No 341
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=98.26 E-value=4.5e-07 Score=50.72 Aligned_cols=29 Identities=21% Similarity=0.296 Sum_probs=26.4
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C 109 (253)
|+.||+.|.+.+.|..|+++|++++||.+
T Consensus 9 C~~C~k~f~~~~~L~~H~~~H~~~k~~~~ 37 (39)
T 1njq_A 9 CSFCKREFRSAQALGGHMNVHRRDRARLR 37 (39)
T ss_dssp CTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence 77788999999999999999999999864
No 342
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=98.26 E-value=3.1e-07 Score=47.44 Aligned_cols=29 Identities=38% Similarity=0.652 Sum_probs=26.4
Q ss_pred CcccccccccccCCHHHHHHhhhhcCCCCCc
Q 025404 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
+||.|+.|++.|.....|..|+++ |++++
T Consensus 1 ~~~~C~~C~k~f~~~~~l~~H~~~--H~~~k 29 (29)
T 2m0f_A 1 GPLKCRECGKQFTTSGNLKRHLRI--HSGEK 29 (29)
T ss_dssp CCEECTTTSCEESCHHHHHHHHHH--HHTCC
T ss_pred CCccCCCCCCccCChhHHHHHHHH--hcCCC
Confidence 689999999999999999999999 87753
No 343
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=97.58 E-value=1.2e-07 Score=49.55 Aligned_cols=29 Identities=28% Similarity=0.571 Sum_probs=26.6
Q ss_pred CCcccccccccccCCHHHHHHhhhhcCCCCC
Q 025404 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (253)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~ 42 (253)
++||.|+.|++.|.....|..|+++ |+++
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~--h~~~ 29 (30)
T 2lvr_A 1 MKPYVCIHCQRQFADPGALQRHVRI--HTGE 29 (30)
Confidence 5799999999999999999999999 8765
No 344
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.25 E-value=4.8e-08 Score=65.85 Aligned_cols=46 Identities=13% Similarity=0.147 Sum_probs=36.9
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCCccccCccchhhhhhccccc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAID 127 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~~f~~~~~l~~h~~~~~ 127 (253)
|+.|++.|.+.+.|..|+++|++++||.|.. +.....|..|.+.+.
T Consensus 28 C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~-~~~~~~~~~~~~~~~ 73 (88)
T 1x6f_A 28 CKHCDSKLQSTAELTSHLNIHNEEFQKRAKR-QERRKQLLSKQKYAD 73 (88)
T ss_dssp CSSSCCEESSHHHHHHHHHHHHHHHHHHCCC-CSCCCCCCCCCCCCC
T ss_pred CCCCCCEeCCHHHHHHHHHHhCCCCCcccch-hhhHHHHHhhhcccc
Confidence 6678888999999999999999999999965 556666777765544
No 345
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=97.56 E-value=1.3e-07 Score=49.06 Aligned_cols=28 Identities=32% Similarity=0.632 Sum_probs=25.9
Q ss_pred CcccccccccccCCHHHHHHhhhhcCCCCC
Q 025404 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~ 42 (253)
+||.|+.|++.|...+.|..|+++ |+++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 28 (29)
T 2lvt_A 1 KPCQCVMCGKAFTQASSLIAHVRQ--HTGE 28 (29)
Confidence 589999999999999999999999 8775
No 346
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.23 E-value=5.2e-07 Score=52.90 Aligned_cols=29 Identities=21% Similarity=0.205 Sum_probs=21.4
Q ss_pred ccccccCChHHHHHHHHHccCCCCCCccc
Q 025404 83 LCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~h~~~~~~~C~~ 111 (253)
.|++.|.+.+.|..|+++|++++||+|..
T Consensus 19 ~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 47 (48)
T 2ent_A 19 GCGWRFSRSDELSRHRRSHSGVKPSGPSS 47 (48)
T ss_dssp SCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred CCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 56677777777777877787777777753
No 347
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=98.23 E-value=5.1e-07 Score=47.06 Aligned_cols=29 Identities=41% Similarity=0.671 Sum_probs=25.9
Q ss_pred CcccccccccccCCHHHHHHh-hhhcCCCCCc
Q 025404 13 ARHKCVACYKQFKRKDHLIEH-MKISYHSVHQ 43 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H-~~~~~H~~~~ 43 (253)
+||.|+.|++.|...+.|..| +++ |++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~~--H~~~~ 30 (30)
T 1paa_A 1 KAYACGLCNRAFTRRDLLIRHAQKI--HSGNL 30 (30)
T ss_dssp CCSBCTTTCCBCSSSHHHHHHHTTT--SCCCC
T ss_pred CCcCCcccCcccCChHHHHHHHHHH--ccCCC
Confidence 589999999999999999999 788 88753
No 348
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=98.22 E-value=4.4e-07 Score=47.18 Aligned_cols=29 Identities=17% Similarity=0.305 Sum_probs=26.3
Q ss_pred CcccccccccccCCHHHHHHhhhhcCCCCCc
Q 025404 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
+||.|+.|++.|...+.|..|+++ |++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~--h~~~~ 29 (30)
T 1klr_A 1 KTYQCQYCEFRSADSSNLKTHIKT--KHSKE 29 (30)
T ss_dssp CCCCCSSSSCCCSCSHHHHHHHHH--HTSSC
T ss_pred CCccCCCCCCccCCHHHHHHHHHH--HccCC
Confidence 589999999999999999999999 77664
No 349
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=98.21 E-value=8.4e-07 Score=44.98 Aligned_cols=27 Identities=30% Similarity=0.550 Sum_probs=23.7
Q ss_pred cccccccccccCCHHHHHHhhhhcCCCCC
Q 025404 14 RHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (253)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~H~~~ 42 (253)
||+|+.|++.|.....|..|+++ |+++
T Consensus 1 ~~~C~~C~k~f~~~~~l~~H~~~--h~~~ 27 (27)
T 1znf_A 1 XYKCGLCERSFVEKSALSRHQRV--HKNX 27 (27)
T ss_dssp -CBCSSSCCBCSSHHHHHHHGGG--TCC-
T ss_pred CccCCCCCCcCCCHHHHHHHHHH--cCCC
Confidence 68999999999999999999999 8763
No 350
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=98.18 E-value=3.6e-07 Score=47.15 Aligned_cols=28 Identities=39% Similarity=0.750 Sum_probs=25.8
Q ss_pred CcccccccccccCCHHHHHHhhhhcCCCCC
Q 025404 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~ 42 (253)
+||.|+.|++.|.....|..|+++ |+++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~--h~~~ 28 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQVGNLKAHLKI--HIAD 28 (29)
T ss_dssp CCCCCSSCCCCCCTTTHHHHHHHH--HHSC
T ss_pred CCCcCCCCCcccCCHHHHHHHHHH--hccC
Confidence 689999999999999999999999 8765
No 351
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=98.17 E-value=5.4e-07 Score=49.68 Aligned_cols=30 Identities=17% Similarity=0.105 Sum_probs=20.8
Q ss_pred CCCCcc-ccccccccccCHHHHhhhhCCCCCCC
Q 025404 39 HSVHQP-KCAVCQKLSKSFESLREHLTGPLSKA 70 (253)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~ 70 (253)
+.+++| +|++||++|.+.++|.+|+ ||.|.
T Consensus 3 ~~gekp~~C~~CgK~F~~~s~L~~H~--py~C~ 33 (36)
T 1fv5_A 3 LLKPARFMCLPCGIAFSSPSTLEAHQ--AYYCS 33 (36)
T ss_dssp SSSCCCCEETTTTEECSCHHHHHHHH--HHTST
T ss_pred CCCccCeECCCCCCccCCHhHccCcC--CeECc
Confidence 456677 7777777777777777776 55553
No 352
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=97.41 E-value=3.2e-07 Score=46.27 Aligned_cols=24 Identities=25% Similarity=0.524 Sum_probs=22.7
Q ss_pred CcccccccccccCCHHHHHHhhhh
Q 025404 13 ARHKCVACYKQFKRKDHLIEHMKI 36 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~ 36 (253)
|||.|+.|++.|...+.|..|+++
T Consensus 1 kp~~C~~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQLANHIRH 24 (26)
Confidence 689999999999999999999998
No 353
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.10 E-value=1.6e-06 Score=46.92 Aligned_cols=26 Identities=31% Similarity=0.483 Sum_probs=22.7
Q ss_pred ccccccccCChHHHHHHHHHccCCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAP 106 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~ 106 (253)
|..|++.|.+.+.|..|+++|++++|
T Consensus 10 C~~C~k~f~~~~~L~~H~~~h~~~kp 35 (35)
T 2elx_A 10 CALCLKKFVSSIRLRSHIREVHGAAQ 35 (35)
T ss_dssp CSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred CCCCcchhCCHHHHHHHHHHHcCCCC
Confidence 67788888999999999999998875
No 354
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.07 E-value=1.9e-06 Score=47.31 Aligned_cols=26 Identities=15% Similarity=0.367 Sum_probs=22.4
Q ss_pred ccccccccCChHHHHHHHHHccCCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAP 106 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~ 106 (253)
|..|++.|.+.+.|..|+++|++++|
T Consensus 12 C~~C~k~f~~~~~l~~H~~~h~~~kp 37 (37)
T 2elo_A 12 CPVCEKSFSEDRLIKSHIKTNHPEVS 37 (37)
T ss_dssp ETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred CCCCCCccCCHHHHHHHHHHHcCCCC
Confidence 67788888899999999999998875
No 355
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=98.02 E-value=1.1e-07 Score=50.86 Aligned_cols=27 Identities=22% Similarity=0.439 Sum_probs=24.2
Q ss_pred ccccccccCChHHHHHHHHHccCCCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPV 107 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~ 107 (253)
|+.||+.|.+.+.|..|+++|++++||
T Consensus 5 C~~C~k~f~~~~~L~~H~~~H~~~kp~ 31 (32)
T 2kfq_A 5 CPACPKRFMRSDALSKHIKTAFIVVAL 31 (32)
T ss_dssp SSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred CCCCCcccCCHHHHHHHHHHHccCCCC
Confidence 677888889999999999999999986
No 356
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=98.00 E-value=3.8e-06 Score=43.11 Aligned_cols=25 Identities=20% Similarity=0.506 Sum_probs=22.5
Q ss_pred ccccccccCChHHHHHHHHHccCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
|+.|++.|.+.+.|..|+++|++++
T Consensus 5 C~~C~~~f~~~~~l~~H~~~h~~~k 29 (29)
T 1ard_A 5 CEVCTRAFARQEHLKRHYRSHTNEK 29 (29)
T ss_dssp CTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred CCCCCcccCCHHHHHHHHHHhcCCC
Confidence 7788899999999999999998864
No 357
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.99 E-value=7.6e-07 Score=52.15 Aligned_cols=32 Identities=25% Similarity=0.581 Sum_probs=27.4
Q ss_pred CCCCccccc--ccccccCCHHHHHHhhhhcCCCCCc
Q 025404 10 RSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQ 43 (253)
Q Consensus 10 ~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (253)
++++||+|+ .|++.|...+.|..|+++ |++++
T Consensus 14 ~~~k~~~C~~~~C~k~F~~~~~L~~H~~~--H~~ek 47 (47)
T 1ncs_A 14 MPDKTFECLFPGCTKTFKRRYNIRSHIQT--HLEDR 47 (47)
T ss_dssp ETTTEEECCCTTCCCEECSSSSHHHHHHH--HTTTC
T ss_pred CCCCCeECCCCCCCCccCCHHHHHHHHHH--ccCCC
Confidence 478999995 799999999999999998 88753
No 358
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=97.99 E-value=2.7e-06 Score=46.05 Aligned_cols=26 Identities=15% Similarity=0.531 Sum_probs=21.7
Q ss_pred ccccccccCChHHHHHHHHHccCCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAP 106 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~ 106 (253)
|..|++.|.+.+.|..|+++|++++|
T Consensus 10 C~~C~k~f~~~~~l~~H~~~H~~~~~ 35 (35)
T 1srk_A 10 CRICLSAFTTKANCARHLKVHTDTLS 35 (35)
T ss_dssp CSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCC
Confidence 66778888888999999999988775
No 359
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=97.98 E-value=3.3e-06 Score=43.35 Aligned_cols=27 Identities=30% Similarity=0.508 Sum_probs=24.7
Q ss_pred Cccccc--ccccccCCHHHHHHhhhhcCCCC
Q 025404 13 ARHKCV--ACYKQFKRKDHLIEHMKISYHSV 41 (253)
Q Consensus 13 k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~ 41 (253)
+||.|+ .|++.|...+.|..|+++ |++
T Consensus 1 k~~~C~~~~C~k~f~~~~~l~~H~~~--H~~ 29 (29)
T 2ab3_A 1 MVYVCHFENCGRSFNDRRKLNRHKKI--HTG 29 (29)
T ss_dssp CCEEECSTTTCEEESSHHHHHHHHGG--GTC
T ss_pred CCCCCcCCcCcCccCCHHHHHHHHHH--hCC
Confidence 589999 999999999999999999 764
No 360
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=97.98 E-value=3.9e-06 Score=43.34 Aligned_cols=26 Identities=19% Similarity=0.248 Sum_probs=23.2
Q ss_pred ccccccccCChHHHHHHHHHccCCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAP 106 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~ 106 (253)
|+.|++.|.+.+.|..|+++|+++++
T Consensus 5 C~~C~k~f~~~~~l~~H~~~h~~~~~ 30 (30)
T 1klr_A 5 CQYCEFRSADSSNLKTHIKTKHSKEK 30 (30)
T ss_dssp CSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred CCCCCCccCCHHHHHHHHHHHccCCC
Confidence 77788999999999999999998764
No 361
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=97.95 E-value=3e-06 Score=43.60 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=22.8
Q ss_pred cccccccccCChHHHHHHHHHccCCC
Q 025404 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 80 ~C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
.|+.|++.|.+.+.|..|+++|++++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 1rik_A 4 ACPECPKRFMRSDHLTLHILLHENKK 29 (29)
T ss_dssp ECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred cCCCCCchhCCHHHHHHHHHHhcCCC
Confidence 37788999999999999999998874
No 362
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.95 E-value=3.8e-06 Score=43.09 Aligned_cols=25 Identities=24% Similarity=0.408 Sum_probs=22.7
Q ss_pred ccccccccCChHHHHHHHHHccCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
|..|++.|.+.+.|..|+++|++++
T Consensus 5 C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2m0f_A 5 CRECGKQFTTSGNLKRHLRIHSGEK 29 (29)
T ss_dssp CTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred CCCCCCccCChhHHHHHHHHhcCCC
Confidence 7788999999999999999999874
No 363
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.95 E-value=4e-06 Score=46.32 Aligned_cols=28 Identities=21% Similarity=0.384 Sum_probs=24.8
Q ss_pred cc--ccccccCChHHHHHHHHHccCCCCCC
Q 025404 81 CN--LCMNIFDSPSSLIKHKEACSLSAPVP 108 (253)
Q Consensus 81 C~--~C~k~f~~~~~l~~H~~~h~~~~~~~ 108 (253)
|. .|++.|.+.+.|..|+++|++++||.
T Consensus 9 C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~ 38 (38)
T 1bhi_A 9 CTAPGCGQRFTNEDHLAVHKHKHEMTLKFG 38 (38)
T ss_dssp CCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred CCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence 56 58899999999999999999999873
No 364
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=97.95 E-value=3.2e-06 Score=46.37 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=11.9
Q ss_pred cccccccCChHHHHHHHHHccC
Q 025404 82 NLCMNIFDSPSSLIKHKEACSL 103 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~~h~~ 103 (253)
+.|++.|.+.+.|..|+++|++
T Consensus 15 ~~C~k~f~~~~~l~~H~~~H~~ 36 (37)
T 1p7a_A 15 PDCDRSFSRSDHLALHRKRHML 36 (37)
T ss_dssp TTTCCCBSSHHHHHHHHGGGTC
T ss_pred CCCCcccCcHHHHHHHHHHhcc
Confidence 3344555555556666655554
No 365
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.91 E-value=5.3e-06 Score=42.83 Aligned_cols=25 Identities=28% Similarity=0.650 Sum_probs=22.3
Q ss_pred ccccccccCChHHHHHHHHHccCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
|..|++.|.+.+.|..|+++|++++
T Consensus 6 C~~C~~~f~~~~~l~~H~~~h~~~k 30 (30)
T 2m0d_A 6 CDYCGRSFSDPTSKMRHLETHDTDK 30 (30)
T ss_dssp CTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred CCCCCcccCCHHHHHHHHHHhccCC
Confidence 7778899999999999999998864
No 366
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=97.90 E-value=3.8e-06 Score=42.40 Aligned_cols=24 Identities=29% Similarity=0.559 Sum_probs=20.8
Q ss_pred ccccccccCChHHHHHHHHHccCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLS 104 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~ 104 (253)
|..|++.|.+.+.|..|+++|+++
T Consensus 4 C~~C~k~f~~~~~l~~H~~~h~~~ 27 (27)
T 1znf_A 4 CGLCERSFVEKSALSRHQRVHKNX 27 (27)
T ss_dssp CSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred CCCCCCcCCCHHHHHHHHHHcCCC
Confidence 778899999999999999999864
No 367
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.89 E-value=7.1e-06 Score=44.57 Aligned_cols=25 Identities=28% Similarity=0.553 Sum_probs=21.4
Q ss_pred ccccccccCChHHHHHHHHHccCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
|+.|++.|.+.+.|..|+++|++++
T Consensus 12 C~~C~k~f~~~~~l~~H~~~H~~ek 36 (36)
T 2elr_A 12 CDMCGKKFKSKGTLKSHKLLHTADG 36 (36)
T ss_dssp CTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred cCcCCCCcCchHHHHHHHHHhcCCC
Confidence 6778888889999999999998874
No 368
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.89 E-value=5.2e-06 Score=42.48 Aligned_cols=25 Identities=20% Similarity=0.365 Sum_probs=22.2
Q ss_pred ccccccccCChHHHHHHHHHccCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
|+.|++.|.+.+.|..|+++|++++
T Consensus 5 C~~C~~~f~~~~~l~~H~~~h~~~~ 29 (29)
T 2m0e_A 5 CPHCDKKFNQVGNLKAHLKIHIADG 29 (29)
T ss_dssp CSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred CCCCCcccCCHHHHHHHHHHhccCC
Confidence 6778889999999999999998874
No 369
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=97.07 E-value=2e-06 Score=44.35 Aligned_cols=25 Identities=32% Similarity=0.530 Sum_probs=22.2
Q ss_pred ccccccccCChHHHHHHHHHccCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
|+.|++.|.+.+.|..|+++|++++
T Consensus 5 C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2lvt_A 5 CVMCGKAFTQASSLIAHVRQHTGEK 29 (29)
Confidence 7788899999999999999998764
No 370
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.86 E-value=7.6e-06 Score=44.52 Aligned_cols=25 Identities=24% Similarity=0.453 Sum_probs=21.4
Q ss_pred ccccccccCChHHHHHHHHHccCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
|+.|++.|...+.|..|+++|++++
T Consensus 12 C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2els_A 12 CEYCNKVFKFKHSLQAHLRIHTNEK 36 (36)
T ss_dssp CTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred CCCCCceeCCHHHHHHHHHHhCCCC
Confidence 6778888889999999999998764
No 371
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.86 E-value=7.9e-06 Score=45.52 Aligned_cols=22 Identities=14% Similarity=0.001 Sum_probs=19.6
Q ss_pred ccccccCChHHHHHHHHHccCC
Q 025404 83 LCMNIFDSPSSLIKHKEACSLS 104 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~h~~~ 104 (253)
.|+++|.+++.|+.|+++|+++
T Consensus 16 ~C~k~F~~~~~L~~H~r~Htg~ 37 (38)
T 2eln_A 16 GCDYSTPDKYKLQAHLKVHTAL 37 (38)
T ss_dssp SCCCEESCHHHHHHHHHHHSCC
T ss_pred CCCCccCCHHHHHHHHHhcCCC
Confidence 3888999999999999999886
No 372
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=97.85 E-value=6.5e-06 Score=43.14 Aligned_cols=23 Identities=22% Similarity=0.362 Sum_probs=21.2
Q ss_pred ccccccCChHHHHHHHHHccCCC
Q 025404 83 LCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
.||+.|.+.+.|..|+++|++++
T Consensus 9 ~C~k~f~~~~~L~~H~~~H~~~k 31 (31)
T 1sp2_A 9 YCGKRFTRSDELQRHKRTHTGEK 31 (31)
T ss_dssp TCCCBCSSHHHHHHHHTTTSCCC
T ss_pred CCCcccCCHhHHHHHHHHhcCCC
Confidence 79999999999999999999874
No 373
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.84 E-value=8.2e-06 Score=44.30 Aligned_cols=25 Identities=16% Similarity=0.167 Sum_probs=20.6
Q ss_pred ccccccccCChHHHHHHHHHccCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
|..|++.|...+.|..|+++|++++
T Consensus 12 C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elt_A 12 CPQCSYASAIKANLNVHLRKHTGEK 36 (36)
T ss_dssp CSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred CCCCCcccCCHHHHHHHHHHccCCC
Confidence 6667788888899999999998764
No 374
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.81 E-value=6.5e-06 Score=44.81 Aligned_cols=25 Identities=16% Similarity=0.264 Sum_probs=19.2
Q ss_pred ccccccccCChHHHHHHHHHccCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
|..|++.|.+.+.|..|+++|++++
T Consensus 12 C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elv_A 12 CHICERKFKNELDRDRHMLVHGDKW 36 (36)
T ss_dssp CSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred CCCCCCccCCHHHHHHHHHHhcCCC
Confidence 5667777888888888888887764
No 375
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.81 E-value=1.1e-05 Score=43.90 Aligned_cols=25 Identities=32% Similarity=0.424 Sum_probs=20.3
Q ss_pred ccccccccCChHHHHHHHHHccCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
|+.|++.|.+.+.|..|+++|++++
T Consensus 12 C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elq_A 12 CSLCEYATRSKSNLKAHMNRHSTEK 36 (36)
T ss_dssp CSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred CCCCCchhCCHHHHHHHHHHhccCC
Confidence 6667788888888999998888764
No 376
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.76 E-value=1.2e-05 Score=42.43 Aligned_cols=25 Identities=32% Similarity=0.559 Sum_probs=21.9
Q ss_pred cc--ccccccCChHHHHHHHHHccCCC
Q 025404 81 CN--LCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~--~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
|. .|++.|.+.+.|..|+++|++++
T Consensus 6 C~~~~C~k~f~~~~~L~~H~~~H~~~~ 32 (32)
T 1zfd_A 6 CDHPGCDKAFVRNHDLIRHKKSHQEKA 32 (32)
T ss_dssp CCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred CcCCCCCCccCCHHHHHHHHHHccCCC
Confidence 55 68899999999999999999874
No 377
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=96.94 E-value=3.9e-06 Score=43.45 Aligned_cols=25 Identities=24% Similarity=0.485 Sum_probs=21.8
Q ss_pred ccccccccCChHHHHHHHHHccCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
|+.|++.|.+.+.|..|+++|++++
T Consensus 6 C~~C~k~f~~~~~l~~H~~~h~~~k 30 (30)
T 2lvr_A 6 CIHCQRQFADPGALQRHVRIHTGEK 30 (30)
Confidence 6778889999999999999998764
No 378
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.73 E-value=1.1e-05 Score=44.09 Aligned_cols=25 Identities=28% Similarity=0.283 Sum_probs=20.0
Q ss_pred ccccccccCCh-HHHHHHHHHccCCC
Q 025404 81 CNLCMNIFDSP-SSLIKHKEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~-~~l~~H~~~h~~~~ 105 (253)
|+.|++.|.+. +.|..|+++|++++
T Consensus 12 C~~C~k~f~~~~~~L~~H~~~H~~~k 37 (37)
T 2elp_A 12 CPYCDFYFMKNGSDLQRHIWAHEGVK 37 (37)
T ss_dssp CSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCChhhccCHHHHHHHHHhcCCCC
Confidence 56677788888 88999998888764
No 379
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.73 E-value=8.5e-06 Score=44.76 Aligned_cols=24 Identities=21% Similarity=0.265 Sum_probs=14.2
Q ss_pred ccccccccCChHHHHHH-HHHccCC
Q 025404 81 CNLCMNIFDSPSSLIKH-KEACSLS 104 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H-~~~h~~~ 104 (253)
|+.|++.|.+.+.|..| +++|+++
T Consensus 12 C~~C~k~f~~~~~L~~H~~~~H~~~ 36 (37)
T 2elm_A 12 CSQCHYSSITKNCLKRHVIQKHSNI 36 (37)
T ss_dssp CSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred CCCCCcccCCHHHHHHHHHHHccCc
Confidence 44455566666666666 6666543
No 380
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.70 E-value=1.7e-05 Score=39.98 Aligned_cols=22 Identities=27% Similarity=0.457 Sum_probs=19.2
Q ss_pred ccccccccCChHHHHHHHHHcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACS 102 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~ 102 (253)
|+.||+.|.+.+.|..|+++|+
T Consensus 6 C~~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvh_A 6 CSLCPQRSRDFSAMTKHLRTHG 27 (27)
T ss_dssp CSSSSCEESSHHHHHHHHHHCC
T ss_pred CCCcChhhCCHHHHHHHHHHcc
Confidence 6778889999999999999884
No 381
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.70 E-value=2.9e-05 Score=48.89 Aligned_cols=26 Identities=23% Similarity=0.611 Sum_probs=22.3
Q ss_pred ccccccccCChHHHHHHHHHccCCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAP 106 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~ 106 (253)
|..|++.|.+.+.|..|+++|++++.
T Consensus 16 C~~CgK~F~~~s~L~~H~r~Htg~~~ 41 (66)
T 2epp_A 16 CGLCGKVFTDANRLRQHEAQHGVTSL 41 (66)
T ss_dssp CTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred CCCCCCccCCHHHHHhhhhhhCCCcc
Confidence 56678888999999999999998753
No 382
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.69 E-value=1.2e-05 Score=40.82 Aligned_cols=23 Identities=17% Similarity=0.375 Sum_probs=19.6
Q ss_pred ccccccccCChHHHHHHHHHccC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSL 103 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~ 103 (253)
|+.|++.|.+.+.|..|+++|++
T Consensus 6 C~~C~k~f~~~~~l~~H~~~h~~ 28 (28)
T 2kvf_A 6 CSVCGKRFSLKHQMETHYRVHTG 28 (28)
T ss_dssp CSSSCCEESCHHHHHHHHTTSCC
T ss_pred CCCCCcccCCHHHHHHHHHhcCC
Confidence 67788888999999999988864
No 383
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.67 E-value=1.2e-05 Score=41.53 Aligned_cols=25 Identities=32% Similarity=0.585 Sum_probs=21.6
Q ss_pred ccccccccCChHHHHHH-HHHccCCC
Q 025404 81 CNLCMNIFDSPSSLIKH-KEACSLSA 105 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H-~~~h~~~~ 105 (253)
|+.|++.|.+.+.|..| +++|++++
T Consensus 5 C~~C~k~f~~~~~l~~H~~~~H~~~~ 30 (30)
T 1paa_A 5 CGLCNRAFTRRDLLIRHAQKIHSGNL 30 (30)
T ss_dssp CTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred CcccCcccCChHHHHHHHHHHccCCC
Confidence 77788999999999999 78998864
No 384
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.64 E-value=1.4e-05 Score=40.35 Aligned_cols=22 Identities=32% Similarity=0.428 Sum_probs=18.5
Q ss_pred ccccccccCChHHHHHHHHHcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACS 102 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~ 102 (253)
|+.||+.|.+.+.|..|+++|+
T Consensus 6 C~~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvg_A 6 CPLCRAGCPSLASMQAHMRGHS 27 (27)
T ss_dssp ETTTTEEESCHHHHHHHHTTCC
T ss_pred CCCCCcccCCHHHHHHHHHhcC
Confidence 7778888889999999988774
No 385
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=97.62 E-value=2.4e-05 Score=42.83 Aligned_cols=23 Identities=17% Similarity=0.179 Sum_probs=20.0
Q ss_pred ccccccCChHHHHHHHHHccCCC
Q 025404 83 LCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
.|++.|.+.+.|..|+++|++++
T Consensus 15 ~C~k~f~~~~~L~~H~~~H~~ek 37 (37)
T 1va1_A 15 GCGKVYGKTSHLRAHLRWHTGER 37 (37)
T ss_dssp TCCCEESCHHHHHHHHHHHHTTC
T ss_pred CCCCccCCHHHHHHHHHhcCCCC
Confidence 48888999999999999998874
No 386
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=96.70 E-value=1.1e-05 Score=40.23 Aligned_cols=22 Identities=27% Similarity=0.461 Sum_probs=18.7
Q ss_pred ccccccccCChHHHHHHHHHcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACS 102 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~ 102 (253)
|+.||+.|.+.+.|..|+++|+
T Consensus 5 C~~C~k~f~~~~~l~~H~~~H~ 26 (26)
T 2lvu_A 5 CERCGKRFVQSSQLANHIRHHD 26 (26)
Confidence 6778888899999999998874
No 387
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=97.46 E-value=4.5e-05 Score=38.84 Aligned_cols=23 Identities=26% Similarity=0.496 Sum_probs=20.5
Q ss_pred cc--ccccccCChHHHHHHHHHccC
Q 025404 81 CN--LCMNIFDSPSSLIKHKEACSL 103 (253)
Q Consensus 81 C~--~C~k~f~~~~~l~~H~~~h~~ 103 (253)
|. .|++.|.+.+.|..|+++|++
T Consensus 5 C~~~~C~k~f~~~~~l~~H~~~H~~ 29 (29)
T 2ab3_A 5 CHFENCGRSFNDRRKLNRHKKIHTG 29 (29)
T ss_dssp ECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred CcCCcCcCccCCHHHHHHHHHHhCC
Confidence 67 899999999999999999874
No 388
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=97.46 E-value=4.3e-05 Score=44.68 Aligned_cols=26 Identities=15% Similarity=0.379 Sum_probs=20.6
Q ss_pred ccccccccCChHHHHHHHH-HccCCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKE-ACSLSAP 106 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~-~h~~~~~ 106 (253)
|..|++.|.+.+.|..|++ +|+++.+
T Consensus 10 C~~C~k~F~~~~~L~~H~~~~H~~e~~ 36 (48)
T 3iuf_A 10 CDICGKRYKNRPGLSYHYAHSHLAEEE 36 (48)
T ss_dssp CTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred CCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence 6778888999999999999 9998765
No 389
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.29 E-value=7.1e-05 Score=43.43 Aligned_cols=23 Identities=13% Similarity=0.183 Sum_probs=19.2
Q ss_pred ccccccCChHHHHHHHHHccCCC
Q 025404 83 LCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
.|++.|.+.+.|..|+++|++++
T Consensus 25 ~C~k~F~~~~~L~~H~~~H~~ek 47 (47)
T 1ncs_A 25 GCTKTFKRRYNIRSHIQTHLEDR 47 (47)
T ss_dssp TCCCEECSSSSHHHHHHHHTTTC
T ss_pred CCCCccCCHHHHHHHHHHccCCC
Confidence 57788888889999999998864
No 390
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=96.75 E-value=0.00058 Score=48.20 Aligned_cols=28 Identities=25% Similarity=0.542 Sum_probs=18.3
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhh
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKI 36 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (253)
.+|++||.|..|++.|.+...|..|+++
T Consensus 45 ~tGekpfyC~~C~K~F~~~~~L~~H~rs 72 (124)
T 1zr9_A 45 LPGGGLHRCLACARYFIDSTNLKTHFRS 72 (124)
T ss_dssp SGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred CCCCcceEcccCcchhCCHHHHHHHHhh
Confidence 3466666666666666666666666654
No 391
>4hec_A Putative uncharacterized protein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, unknown; 1.80A {Mycobacterium tuberculosis}
Probab=96.56 E-value=0.0032 Score=48.06 Aligned_cols=102 Identities=14% Similarity=0.062 Sum_probs=62.8
Q ss_pred cCCCceeeeecccccCCCCCcccccceeeeecCCCCeEEeeeccC-CCCcccceee--eccCCHHhhcCCCCHHHHHHHH
Q 025404 132 CRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQP-QLPVTNYRYE--VTGLTEEDIKNAMPLKEVKDKI 208 (253)
Q Consensus 132 ~~~~~~~~~dcE~~g~~~~~~~~ll~~v~iv~~~~~~~~~~~v~P-~~~i~~~~~~--~~Git~~~l~~~~~~~~v~~~l 208 (253)
.....-+.+|||+++.+. ..++ ..|-+|.++|...|-...-. ...+.++..+ +.++.........++.++..+|
T Consensus 19 p~~m~r~FlDTEFt~d~~--~~eL-ISIGlV~EdGrEFYav~~d~d~~~~~~wVr~~Vlp~L~~~~~~~~~s~~~i~~~L 95 (190)
T 4hec_A 19 PGSMVRYFYDTEFIEDGH--TIEL-ISIGVVAEDGREYYAVSTEFDPERAGSWVRTHVLPKLPPPASQLWRSRQQIRLDL 95 (190)
T ss_dssp --CEEEEEEEEEEEECSS--CEEE-EEEEEEETTSCEEEEEETTSCGGGCCHHHHHHTGGGSCCTTSTTEECHHHHHHHH
T ss_pred CCceeEEEEeeeecCCCC--CCCE-EEEEEEcCCCCEEEEEecCCChhhCcHHHHhccccCCCCCcccccCCHHHHHHHH
Confidence 334456899999998433 3344 66777788998755433211 1223333322 3455443344446899999999
Q ss_pred HHHHhcCCCCCcccccCCCCeEEEeechhhhhhhhcC
Q 025404 209 LEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM 245 (253)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~~ 245 (253)
.+||... .+....|+|++..+|..+|.-
T Consensus 96 ~~FL~~~---------~~~~~eLwa~~~~yD~~~L~q 123 (190)
T 4hec_A 96 EEFLRID---------GTDSIELWAWVGAYDHVALCQ 123 (190)
T ss_dssp HHHTTTT---------SSCEEEEEESSCHHHHHHHHT
T ss_pred HHHHHhc---------CCCCCEEEEecccccHHHHHH
Confidence 9999310 012236999999999998863
No 392
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=96.42 E-value=0.0035 Score=38.94 Aligned_cols=56 Identities=23% Similarity=0.247 Sum_probs=36.3
Q ss_pred cccccccCCHHHHHHhhh-hcCCCCCccccccccccccCHHHHhhhhCCCCCCCcCCcccccccccccccccCChHHHHH
Q 025404 18 VACYKQFKRKDHLIEHMK-ISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIK 96 (253)
Q Consensus 18 ~~C~k~f~~~~~l~~H~~-~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~ 96 (253)
..|++.|.+...|..|+. . |.+.++. ....+|.|. -..|+..+.....|..
T Consensus 7 ~~C~~~f~~~~~l~~Hv~~~--Hv~~~~~----------------~~~~~~~C~----------W~~C~~~~~~~~~L~~ 58 (64)
T 1zw8_A 7 KECPESASSLFDLQRHLLKD--HVSQDFK----------------HPMEPLACN----------WEDCDFLGDDTASIVN 58 (64)
T ss_dssp TTCCCCCSSHHHHHHHHHHH--SCCCCCC----------------CSSCCEECC----------CSSCCCEESSHHHHHH
T ss_pred CCCCCcCCCHHHHHHHHHhh--ccCcccC----------------CCCCCCEee----------CCCCcCCCCChHHHHh
Confidence 569999999999999984 6 8765420 001245552 2346666666677888
Q ss_pred HHHHc
Q 025404 97 HKEAC 101 (253)
Q Consensus 97 H~~~h 101 (253)
|+++.
T Consensus 59 Hir~~ 63 (64)
T 1zw8_A 59 HINAQ 63 (64)
T ss_dssp HHHHH
T ss_pred hcccc
Confidence 88764
No 393
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.49 E-value=0.0075 Score=34.30 Aligned_cols=24 Identities=33% Similarity=0.591 Sum_probs=22.6
Q ss_pred CcccccccccccCCHHHHHHhhhh
Q 025404 13 ARHKCVACYKQFKRKDHLIEHMKI 36 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~ 36 (253)
.+|.|+.|+..|.....|+.||+.
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmky 34 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMCY 34 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhhh
Confidence 789999999999999999999986
No 394
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=95.24 E-value=0.0088 Score=37.07 Aligned_cols=43 Identities=14% Similarity=0.071 Sum_probs=34.3
Q ss_pred cccccccCChHHHHHHH-HHccCCC------CCC-----ccccCccchhhhhhcc
Q 025404 82 NLCMNIFDSPSSLIKHK-EACSLSA------PVP-----FEKTLSNAESQKKISG 124 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~-~~h~~~~------~~~-----C~~~f~~~~~l~~h~~ 124 (253)
..|++.|.+...|..|+ +.|.+.+ +|. |++.+.....|..|++
T Consensus 7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir 61 (64)
T 1zw8_A 7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN 61 (64)
T ss_dssp TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence 45899999999999998 5898776 443 7777777778888864
No 395
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=94.88 E-value=0.024 Score=40.36 Aligned_cols=74 Identities=18% Similarity=0.277 Sum_probs=44.6
Q ss_pred CCcccccccccccCCHHHHHHhh--hhcCCCCC-cc-ccccc-------cccccCHHHHhhhhCCCCCCCcCCccccccc
Q 025404 12 TARHKCVACYKQFKRKDHLIEHM--KISYHSVH-QP-KCAVC-------QKLSKSFESLREHLTGPLSKAHCSGIFSDRG 80 (253)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~--~~~~H~~~-~~-~C~~C-------~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~ 80 (253)
.+++.|..|+..|...+.+..|. +. |... +. .+ .+ ++.|.... +. .. ...-....
T Consensus 30 ~~~~~C~~C~v~~~S~s~~~~H~~gkk--H~~~v~~~~~-~~~~~~~~~~~~~~~~~----~~------~~-~~~~~~~~ 95 (127)
T 1zu1_A 30 FSDTQCKVCSAVLISESQKLAHYQSRK--HANKVRRYMA-INQGEDSVPAKKFKAAP----AE------IS-DGEDRSKC 95 (127)
T ss_dssp BCSSEETTTTEECCSHHHHHHHHHCHH--HHHHHHHHHH-HTTCCCCCSCCCCSCCS----SC------CS-SCCCTTTE
T ss_pred CCCCcCcCCCCEeCCHHHHHHHHCcHH--HHHHHHHHhc-ccCcccCCCCCccCCCc----cc------cc-cCCCCCeE
Confidence 47789999999999999999998 44 4321 11 22 12 11121100 10 00 00111123
Q ss_pred ccccccccCChHHHHHHHH
Q 025404 81 CNLCMNIFDSPSSLIKHKE 99 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~ 99 (253)
|..|+++|.+...|..|..
T Consensus 96 C~~C~~~f~s~~~~~~H~~ 114 (127)
T 1zu1_A 96 CPVCNMTFSSPVVAESHYI 114 (127)
T ss_dssp ETTTTEECSSHHHHHHHHT
T ss_pred cCCCCCEeCCHHHHHHHHC
Confidence 8999999999999999974
No 396
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.83 E-value=0.022 Score=32.35 Aligned_cols=25 Identities=24% Similarity=0.368 Sum_probs=20.1
Q ss_pred cccccccccCChHHHHHHHHHccCC
Q 025404 80 GCNLCMNIFDSPSSLIKHKEACSLS 104 (253)
Q Consensus 80 ~C~~C~k~f~~~~~l~~H~~~h~~~ 104 (253)
.|+.|+..|.....|+.||+-.-++
T Consensus 14 ~CPrCn~~f~~~~sLr~HmkycCp~ 38 (49)
T 2e72_A 14 ICPRCNAQFRVTEALRGHMCYCCPE 38 (49)
T ss_dssp CCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred eCCcccccccchHHHHhhhhhcCcc
Confidence 3888999999999999999855443
No 397
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=94.62 E-value=0.012 Score=41.53 Aligned_cols=18 Identities=22% Similarity=0.331 Sum_probs=9.7
Q ss_pred cccccccCChHHHHHHHH
Q 025404 82 NLCMNIFDSPSSLIKHKE 99 (253)
Q Consensus 82 ~~C~k~f~~~~~l~~H~~ 99 (253)
..|++.|.+.+.|..|++
T Consensus 54 ~~C~K~F~~~~~L~~H~r 71 (124)
T 1zr9_A 54 LACARYFIDSTNLKTHFR 71 (124)
T ss_dssp TTTTEECSSHHHHHHHTT
T ss_pred ccCcchhCCHHHHHHHHh
Confidence 345555555555555554
No 398
>1x9m_A DNA polymerase; DNA ploymerase, N-2-acetylaminofluorene, replication block, mutagenesis, transferase/electron transport/DNA complex; HET: DNA 2DT 8FG; 2.10A {Enterobacteria phage T7} SCOP: c.55.3.5 e.8.1.1 PDB: 1skr_A* 1skw_A* 1sl0_A* 1sks_A* 1sl2_A* 1t7p_A* 1t8e_A* 1tk0_A* 1tk5_A* 1tk8_A* 1tkd_A* 1sl1_A* 1x9s_A* 1x9w_A* 1zyq_A* 2ajq_A*
Probab=93.95 E-value=0.084 Score=48.62 Aligned_cols=69 Identities=16% Similarity=0.100 Sum_probs=42.8
Q ss_pred eeeeecccccCCCCCcccccceeeeecCCCCeEEeeeccCCCCcccceeeeccCCHHhhcCCCCHHHHHHHHHHHHhcCC
Q 025404 137 AVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGE 216 (253)
Q Consensus 137 ~~~~dcE~~g~~~~~~~~ll~~v~iv~~~~~~~~~~~v~P~~~i~~~~~~~~Git~~~l~~~~~~~~v~~~l~~~~~~~~ 216 (253)
++++|+||+|...... .+ ..+.+.+......+ .+.| . .++++++.|..++.
T Consensus 1 ~vv~D~ETtGl~~~~d-~i-~~iqi~~~~~~~~~--~~~p----------------~------~i~~~l~~L~~~l~--- 51 (698)
T 1x9m_A 1 MIVSDIEANALLESVT-KF-HCGVIYDYSTAEYV--SYRP----------------S------DFGAYLDALEAEVA--- 51 (698)
T ss_dssp CEEEEEEESSCGGGCC-CE-EEEEEEETTTTEEE--EECG----------------G------GHHHHHHHHHHHHH---
T ss_pred CEEEEcCCCCcCCCCC-EE-EEEEEEecCCCcEE--EECh----------------H------HHHHHHHHHHHHHh---
Confidence 4799999999753221 22 45555543221111 1111 1 33556788888882
Q ss_pred CCCcccccCCCCeEEEeech-hhhhhhhc
Q 025404 217 STGRLMLDDGKARLLVGHGL-EHDLDSLR 244 (253)
Q Consensus 217 ~~~~~~~~~~~~~~lv~h~~-~~D~~~l~ 244 (253)
.+.++||||+ .||+.+|.
T Consensus 52 ----------~~~~kV~HNa~kfD~~~L~ 70 (698)
T 1x9m_A 52 ----------RGGLIVFHNGHKYDVPALT 70 (698)
T ss_dssp ----------TTCCEEESSTTTTHHHHHH
T ss_pred ----------cCCeEEEcCChHHHHHHHH
Confidence 3468999999 99999995
No 399
>2kfn_A Klenow fragment of DNA polymerase I; complex (polymerase/DNA), exonuclease, transferase, transferase/DNA complex; HET: US1; 2.03A {Escherichia coli} SCOP: c.55.3.5 e.8.1.1 PDB: 1d9f_A* 1d9d_A* 1krp_A* 1ksp_A* 1qsl_A* 1kfs_A* 2kfz_A* 2kzm_A* 2kzz_A* 1dpi_A* 1kfd_A* 1kln_A* 1d8y_A*
Probab=93.88 E-value=0.12 Score=46.65 Aligned_cols=81 Identities=19% Similarity=0.203 Sum_probs=49.4
Q ss_pred ceeeeecccccCCCCCcccccceeeeecCCCCeEEeeeccCCCCcccceeeeccCCHHhhcCCCCHHHHHHHHHHHHhcC
Q 025404 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNG 215 (253)
Q Consensus 136 ~~~~~dcE~~g~~~~~~~~ll~~v~iv~~~~~~~~~~~v~P~~~i~~~~~~~~Git~~~l~~~~~~~~v~~~l~~~~~~~ 215 (253)
.++++|+|++|..... ..+ ..+.++-.+++.. ++ |... .+++ +.+.+++.+++..|..++.
T Consensus 27 ~~va~DtEttgl~~~~-~~i-v~I~~~~~~g~~~---yi-p~~~--------~~~~---~~~~l~~~~vl~~L~~~L~-- 87 (605)
T 2kfn_A 27 PVFAFDTETDSLDNIS-ANL-VGLSFAIEPGVAA---YI-PVAH--------DYLD---APDQISRERALELLKPLLE-- 87 (605)
T ss_dssp SSEEEEEEESCSCTTT-CCE-EEEEEEEETTEEE---EE-ECCC--------CSTT---CCCCCCHHHHHHHHHHHHT--
T ss_pred CeEEEEEecCCCCccc-Cce-EEEEEEEcCCcEE---EE-eccc--------cccc---cccccCHHHHHHHHHHHHc--
Confidence 5689999999975311 122 3333321244432 23 1111 0111 1345678999999999993
Q ss_pred CCCCcccccCCCCeEEEeechhhhhhhhcC
Q 025404 216 ESTGRLMLDDGKARLLVGHGLEHDLDSLRM 245 (253)
Q Consensus 216 ~~~~~~~~~~~~~~~lv~h~~~~D~~~l~~ 245 (253)
+.+.++||||+.||+.+|+-
T Consensus 88 ----------d~~i~kV~hnak~D~~~L~~ 107 (605)
T 2kfn_A 88 ----------DEKALKVGQNLKYDRGILAN 107 (605)
T ss_dssp ----------CTTSCEEESSHHHHHHHHHT
T ss_pred ----------CCCCeEEEECcHHHHHHHHH
Confidence 23458999999999999963
No 400
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=90.83 E-value=0.31 Score=34.45 Aligned_cols=73 Identities=14% Similarity=0.049 Sum_probs=41.3
Q ss_pred cc-ccccccccccCHHHHhhhhC--------CCCCCCcCCcccccccccccccccCChHHHHHHHHHccCCCCCC---cc
Q 025404 43 QP-KCAVCQKLSKSFESLREHLT--------GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FE 110 (253)
Q Consensus 43 ~~-~C~~C~~~f~~~~~l~~H~~--------~~~~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~~~~---C~ 110 (253)
++ .|..|+..|.+.+.+..|.. +.+.+ .++.... .-++.+.... +...+.+.+.|- |.
T Consensus 31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~-~~~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~C~~C~ 100 (127)
T 1zu1_A 31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMA-INQGEDS-----VPAKKFKAAP----AEISDGEDRSKCCPVCN 100 (127)
T ss_dssp CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHH-HTTCCCC-----CSCCCCSCCS----SCCSSCCCTTTEETTTT
T ss_pred CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhc-ccCcccC-----CCCCccCCCc----cccccCCCCCeEcCCCC
Confidence 44 89999999999999999971 12221 1111000 0012222110 111233333442 99
Q ss_pred ccCccchhhhhhccc
Q 025404 111 KTLSNAESQKKISGA 125 (253)
Q Consensus 111 ~~f~~~~~l~~h~~~ 125 (253)
..|.....+..|...
T Consensus 101 ~~f~s~~~~~~H~~g 115 (127)
T 1zu1_A 101 MTFSSPVVAESHYIG 115 (127)
T ss_dssp EECSSHHHHHHHHTS
T ss_pred CEeCCHHHHHHHHCC
Confidence 999999999999854
No 401
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=88.72 E-value=0.18 Score=28.51 Aligned_cols=20 Identities=25% Similarity=0.574 Sum_probs=12.4
Q ss_pred CCCCcCCccccccc--------cccccc
Q 025404 67 LSKAHCSGIFSDRG--------CNLCMN 86 (253)
Q Consensus 67 ~~C~~C~~~f~~~~--------C~~C~k 86 (253)
|.|-.||+.|+... |+.||.
T Consensus 4 Y~C~rCg~~fs~~el~~lP~IrCpyCGy 31 (48)
T 4ayb_P 4 YRCGKCWKTFTDEQLKVLPGVRCPYCGY 31 (48)
T ss_dssp -CCCCTTTTCCCCCSCCCSSSCCTTTCC
T ss_pred EEeeccCCCccHHHHhhCCCcccCccCc
Confidence 56777777776542 777763
No 402
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=87.88 E-value=0.43 Score=25.20 Aligned_cols=27 Identities=26% Similarity=0.549 Sum_probs=22.8
Q ss_pred cccccccccccCCHHHHHHhhhhcCCCC
Q 025404 14 RHKCVACYKQFKRKDHLIEHMKISYHSV 41 (253)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~H~~ 41 (253)
.|.|+.|-+.|.....|..|.... |..
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye~~-H~~ 31 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYEAV-HDA 31 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHH-TSS
T ss_pred ccCCcHHHHHcCCHHHHHHHHHhc-ccc
Confidence 499999999999999999998653 654
No 403
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=87.43 E-value=0.26 Score=36.66 Aligned_cols=60 Identities=20% Similarity=0.446 Sum_probs=29.2
Q ss_pred cc--ccccccccCHHHHhhhh-C---CCCCCCcCCcccccc---------------cccccccccCChHHHHHHHHHccC
Q 025404 45 KC--AVCQKLSKSFESLREHL-T---GPLSKAHCSGIFSDR---------------GCNLCMNIFDSPSSLIKHKEACSL 103 (253)
Q Consensus 45 ~C--~~C~~~f~~~~~l~~H~-~---~~~~C~~C~~~f~~~---------------~C~~C~k~f~~~~~l~~H~~~h~~ 103 (253)
.| .-|+..+. ...+..|. + .+..|+.|+..+... .|+.|+..+. ...|..|+.+++|
T Consensus 84 ~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~ 161 (170)
T 3hcs_A 84 KCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPL 161 (170)
T ss_dssp ECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEEEGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC
T ss_pred CCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHHHHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcC
Confidence 56 45766554 34567776 2 223355554444322 1555555554 3445566666655
Q ss_pred CCC
Q 025404 104 SAP 106 (253)
Q Consensus 104 ~~~ 106 (253)
+.+
T Consensus 162 ~~~ 164 (170)
T 3hcs_A 162 ALE 164 (170)
T ss_dssp ---
T ss_pred hhh
Confidence 544
No 404
>1noy_A Protein (DNA polymerase (E.C.2.7.7.7)); exonuclease, DNA-binding, complex (nucleotidyltransferase/DNA); HET: DNA; 2.20A {Enterobacteria phage T4} SCOP: c.55.3.5 PDB: 1noz_A*
Probab=86.82 E-value=2 Score=36.38 Aligned_cols=37 Identities=5% Similarity=0.135 Sum_probs=28.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCcccccCCCCeEEEeech-hhhhhhhc
Q 025404 197 NAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR 244 (253)
Q Consensus 197 ~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~-~~D~~~l~ 244 (253)
...+-.++...+.+++..- + -.||||||+ .||+.+|.
T Consensus 187 ~~~~E~~LL~~f~~~i~~~------d-----PDii~GyN~~~FDlpyL~ 224 (388)
T 1noy_A 187 PFDNERDMLMEYINLWEQK------R-----PAIFTGWNIEGFDVPYIM 224 (388)
T ss_dssp EESCHHHHHHHHHHHHHHS------C-----CSEEECSSTTTTHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHHh------C-----CcEEEecCCCCccHHHHH
Confidence 4568889999999999321 1 139999996 89999874
No 405
>1qht_A Protein (DNA polymerase); archaea, hyperthermostable, family B polymer alpha family polymerase, transferase; 2.10A {Thermococcus SP} SCOP: c.55.3.5 e.8.1.1 PDB: 1tgo_A 2xhb_A* 2vwj_A* 2vwk_A* 1wns_A* 1wn7_A 1qqc_A* 4ahc_A* 4ail_C* 3a2f_A* 2jgu_A* 1d5a_A
Probab=86.17 E-value=1.5 Score=40.76 Aligned_cols=86 Identities=12% Similarity=0.093 Sum_probs=50.5
Q ss_pred CCCceeeeecccccCC-CCCcccccceeeeecCCCCeEEeeeccCCCCcccceeeeccCCHHhhcCCCCHHHHHHHHHHH
Q 025404 133 RGPKAVAMDCEMVGGG-SNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEI 211 (253)
Q Consensus 133 ~~~~~~~~dcE~~g~~-~~~~~~ll~~v~iv~~~~~~~~~~~v~P~~~i~~~~~~~~Git~~~l~~~~~~~~v~~~l~~~ 211 (253)
...++.++|.|+++.. .+.....+..++..+.++...+. +..+....+...++..++...+.++
T Consensus 133 ~~l~ilsfDIEt~~~~~p~~~~d~Ii~Is~~~~~~~~~~t---------------~~~i~~~~v~~~~~E~~LL~~f~~~ 197 (775)
T 1qht_A 133 EELTMLAFAIATLYHEGEEFGTGPILMISYADGSEARVIT---------------WKKIDLPYVDVVSTEKEMIKRFLRV 197 (775)
T ss_dssp CCCCEEEEEEEECCCTTCCTTCSCEEEEEEECSSCEEEEE---------------SSCCCCSSEEECSCHHHHHHHHHHH
T ss_pred CCcEEEEEEEEEcCCCCCCCCCCcEEEEEEEecCCCeeEe---------------eccccccceEEcCCHHHHHHHHHHH
Confidence 4667899999999843 22112222444444333322111 0112223355567888999999999
Q ss_pred HhcCCCCCcccccCCCCeEEEeec-hhhhhhhhc
Q 025404 212 LNNGESTGRLMLDDGKARLLVGHG-LEHDLDSLR 244 (253)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~lv~h~-~~~D~~~l~ 244 (253)
+.. .+- .+||||| ..||+.+|.
T Consensus 198 i~~--------~dP---DiivGyN~~~FDlpyL~ 220 (775)
T 1qht_A 198 VRE--------KDP---DVLITYNGDNFDFAYLK 220 (775)
T ss_dssp HHH--------HCC---SEEEESSTTTTHHHHHH
T ss_pred HHh--------cCC---CEEEEeCCCCccHHHHH
Confidence 931 111 2999999 579999874
No 406
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=85.31 E-value=0.28 Score=31.97 Aligned_cols=25 Identities=28% Similarity=0.425 Sum_probs=21.1
Q ss_pred ccccccccCChHHHHHHHHHccCCCCCC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~~~~~~ 108 (253)
|-+||+.|. .|++|+++|+|-.|..
T Consensus 24 ClecGK~fK---~LkRHL~~~hgltpee 48 (87)
T 2jsp_A 24 CLECGGSFK---SLKRHLTTHHSMTPEE 48 (87)
T ss_dssp CTBTCCEES---BHHHHHHHTTCSCHHH
T ss_pred ecccchhhH---HHHHHHHHccCCCHHH
Confidence 888999998 4889999988887754
No 407
>1s5j_A DNA polymerase I; replication, disulfide bonds, transferase; HET: DNA; 2.40A {Sulfolobus solfataricus} SCOP: c.55.3.5 e.8.1.1
Probab=84.03 E-value=3.1 Score=39.12 Aligned_cols=95 Identities=14% Similarity=0.070 Sum_probs=53.4
Q ss_pred cCCCceeeeeccc-ccC--C-CCCcc--cccceeeeecCCCCeEEeeeccCCCCcccceeeeccCCHHhhcCCCCHHHHH
Q 025404 132 CRGPKAVAMDCEM-VGG--G-SNGTL--DLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVK 205 (253)
Q Consensus 132 ~~~~~~~~~dcE~-~g~--~-~~~~~--~ll~~v~iv~~~~~~~~~~~v~P~~~i~~~~~~~~Git~~~l~~~~~~~~v~ 205 (253)
..+.++.++|.|+ ++. + ++... ..+..+++++.+|...+ ..+++... ..-... |....+....+..++.
T Consensus 187 ~p~l~ilsfDIEt~s~~~g~fP~~~~~~d~Ii~Is~~~~~g~~~~-~~~~~~~~-~~~~~~---i~~~~v~~~~~E~~LL 261 (847)
T 1s5j_A 187 IPKIKRVAIDIEVYTPVKGRIPDSQKAEFPIISIALAGSDGLKKV-LVLNRNDV-NEGSVK---LDGISVERFNTEYELL 261 (847)
T ss_dssp CCCCCEEEEEEEECCSSSSCCCCTTTCCSCEEEEEEEETTSCEEE-EEECSSCC-CCCCEE---ETTEEEEEESSHHHHH
T ss_pred CCCceEEEEEEEeCcCCCCCCCCccccCCcEEEEEEEccCCCcEE-EEEeCCcc-cccccC---CCCCeEEEeCCHHHHH
Confidence 3456789999999 642 1 22211 12255566655554321 12233211 000011 1222344457899999
Q ss_pred HHHHHHHhcCCCCCcccccCCCCeEEEeec-hhhhhhhhc
Q 025404 206 DKILEILNNGESTGRLMLDDGKARLLVGHG-LEHDLDSLR 244 (253)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~-~~~D~~~l~ 244 (253)
..+.++|. .-.+||||| ..||+.+|.
T Consensus 262 ~~f~~~i~-------------~~diivgyN~~~FDlPyL~ 288 (847)
T 1s5j_A 262 GRFFDILL-------------EYPIVLTFNGDDFDLPYIY 288 (847)
T ss_dssp HHHHHHHT-------------TCSEEEESSTTTTHHHHHH
T ss_pred HHHHHHhc-------------cCCEEEEeCCCCchHHHHH
Confidence 99999993 123999999 579999885
No 408
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=82.52 E-value=1.4 Score=27.66 Aligned_cols=48 Identities=21% Similarity=0.355 Sum_probs=25.0
Q ss_pred CCcccc-cccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh
Q 025404 12 TARHKC-VACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (253)
Q Consensus 12 ~k~~~C-~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (253)
-.+-.| ..|+..+.. ..|..|+.. .-..+. .|..|+..|.. ..|..|.
T Consensus 14 ~~~v~C~~~C~~~v~r-~~l~~H~~~--~C~~r~v~C~~C~~~~~~-~~l~~H~ 63 (76)
T 2yuc_A 14 FNVIPCPNRCPMKLSR-RDLPAHLQH--DCPKRRLKCEFCGCDFSG-EAYESHE 63 (76)
T ss_dssp CSCCBCTTCCSCBCCS-SSSTTTTTT--SCTTSCCCCSSSCCCCCH-HHHHHTT
T ss_pred CcccCCCccccHHhhH-hHHHhhCHh--hCCCcceECCCCCCccCH-HHHHHHH
Confidence 345566 456665543 345555543 333444 66666666543 3355664
No 409
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=82.46 E-value=1.3 Score=23.55 Aligned_cols=26 Identities=15% Similarity=0.424 Sum_probs=20.2
Q ss_pred CCCcccccccccccCCHHHHHHhhhh
Q 025404 11 STARHKCVACYKQFKRKDHLIEHMKI 36 (253)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (253)
...++.|..|+-.|.....+..|++-
T Consensus 5 ~~~~~~C~~C~IsF~~l~ty~aHKk~ 30 (36)
T 1fu9_A 5 EVMKKYCSTCDISFNYVKTYLAHKQF 30 (36)
T ss_dssp CCCCSEETTTTEECSSHHHHHHHHHH
T ss_pred ccCcCeeccccceehhhHHHhhhhee
Confidence 34667888888888888888888764
No 410
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=82.25 E-value=0.61 Score=31.52 Aligned_cols=26 Identities=19% Similarity=0.457 Sum_probs=17.5
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCccc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f 76 (253)
+|..||..|. .-+.+|-.|+.|+...
T Consensus 69 ~C~~CG~~F~------~~~~kPsrCP~CkSe~ 94 (105)
T 2gmg_A 69 QCRKCGFVFK------AEINIPSRCPKCKSEW 94 (105)
T ss_dssp BBTTTCCBCC------CCSSCCSSCSSSCCCC
T ss_pred ChhhCcCeec------ccCCCCCCCcCCCCCc
Confidence 8999999881 1225567787776544
No 411
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=80.38 E-value=1.2 Score=23.48 Aligned_cols=20 Identities=45% Similarity=0.787 Sum_probs=17.1
Q ss_pred ccccccccCChHHHHHHHHH
Q 025404 81 CNLCMNIFDSPSSLIKHKEA 100 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~ 100 (253)
|+.|.+.|.+...|..|...
T Consensus 8 CP~C~~~l~s~~~L~~Hye~ 27 (34)
T 3mjh_B 8 CPQCMKSLGSADELFKHYEA 27 (34)
T ss_dssp CTTTCCEESSHHHHHHHHHH
T ss_pred CcHHHHHcCCHHHHHHHHHh
Confidence 88888999999999999754
No 412
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=77.98 E-value=0.77 Score=33.98 Aligned_cols=60 Identities=22% Similarity=0.427 Sum_probs=34.8
Q ss_pred ccc--cccccccCCHHHHHHhhhhcCCCCCcc-ccccccccccCHHHHhhhh-----CCCCCCCcCCcccccc
Q 025404 15 HKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDR 79 (253)
Q Consensus 15 ~~C--~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~~~f~~~ 79 (253)
..| ..|+..+. ...|..|.. .-.-.+ .|+.|+..+ ....|..|. .+.-.|+.|+..+...
T Consensus 83 v~C~n~GC~~~~~-~~~l~~H~~---~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~ 150 (170)
T 3hcs_A 83 VKCPNEGCLHKME-LRHLEDHQA---HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAFE 150 (170)
T ss_dssp EECCSTTCCCEEE-GGGHHHHHT---TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEGG
T ss_pred cCCCCCCCCceec-HhHHHHHHh---cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCHH
Confidence 455 45666544 345666653 233344 777777766 445577776 2334477777766544
No 413
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=77.90 E-value=0.84 Score=30.83 Aligned_cols=25 Identities=20% Similarity=0.501 Sum_probs=18.0
Q ss_pred CCCCCCCcCCcccc-----ccccccccccc
Q 025404 64 TGPLSKAHCSGIFS-----DRGCNLCMNIF 88 (253)
Q Consensus 64 ~~~~~C~~C~~~f~-----~~~C~~C~k~f 88 (253)
..||.|..||..|. ...|+.|+...
T Consensus 65 v~p~~C~~CG~~F~~~~~kPsrCP~CkSe~ 94 (105)
T 2gmg_A 65 IKPAQCRKCGFVFKAEINIPSRCPKCKSEW 94 (105)
T ss_dssp ECCCBBTTTCCBCCCCSSCCSSCSSSCCCC
T ss_pred EECcChhhCcCeecccCCCCCCCcCCCCCc
Confidence 35889999999992 23488887543
No 414
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=77.49 E-value=1.6 Score=27.30 Aligned_cols=25 Identities=16% Similarity=0.386 Sum_probs=12.3
Q ss_pred CCCCCCcCCcccccc------cccccccccC
Q 025404 65 GPLSKAHCSGIFSDR------GCNLCMNIFD 89 (253)
Q Consensus 65 ~~~~C~~C~~~f~~~------~C~~C~k~f~ 89 (253)
..|.|+.|++.-... .|..|++.|.
T Consensus 25 ~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 25 ARYDCSFCGKKTVKRGAAGIWTCSCCKKTVA 55 (72)
T ss_dssp SCBCCSSCCSSCBSBCSSSCBCCSSSCCCCC
T ss_pred cCccCCCCCCceeEecCCCeEECCCCCCEEe
Confidence 345555555443222 2666666554
No 415
>3qex_A DNA polymerase, GP43; difluorotoluene nucleoside; HET: DNA DOC DGT; 1.73A {Enterobacteria phage RB69} PDB: 3qei_A* 3qer_A* 3qes_A* 3qet_A* 3qep_A* 3qew_A* 3qev_A* 3s9h_A* 3sq0_A* 4dtn_A* 4dto_A* 4dtp_A* 4dtr_A* 4dts_A* 4dtu_A* 4dtx_A* 4e3s_A* 4fjm_A* 4fjl_A* 3spz_A* ...
Probab=76.99 E-value=7.4 Score=36.78 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=57.9
Q ss_pred CCCceeeeecccccCC--C---CCcccccceeeeecCCCCeE--EeeeccCCCCcccceee---------eccCCHHhhc
Q 025404 133 RGPKAVAMDCEMVGGG--S---NGTLDLCARVCLVDEDENVI--FHTYVQPQLPVTNYRYE---------VTGLTEEDIK 196 (253)
Q Consensus 133 ~~~~~~~~dcE~~g~~--~---~~~~~ll~~v~iv~~~~~~~--~~~~v~P~~~i~~~~~~---------~~Git~~~l~ 196 (253)
...+..++|.|+...+ + ....++ ..|++.|..+... ++.+..|...+.+|... -..+..+.+.
T Consensus 106 ~~ir~~~~DIEv~~~~~fPd~~~~~~~I-i~It~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (903)
T 3qex_A 106 TKIRVANFDIEVTSPDGFPEPSQAKHPI-DAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIID 184 (903)
T ss_dssp GGSCEEEEEEECCCTTSSCCTTTCCSCC-CEEEEEETTTTEEEEEEECEETTEECCCCCHHHHHSCGGGTCCCCCHHHHT
T ss_pred ccccEEEEeEEeCCCCCCCCcccCCCCE-EEEEEEeCCCCEEEEEEeeccccccccccccccccccccccccccccccCC
Confidence 3456789999987633 1 123344 7778877766653 22333233333333321 1223344333
Q ss_pred C-----CCCHHHHHHHHHHHHhcCCCCCcccccCCCCeEEEeech-hhhhhhh
Q 025404 197 N-----AMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSL 243 (253)
Q Consensus 197 ~-----~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~-~~D~~~l 243 (253)
+ ..+-.++...+.+++.. -+ -.||+|||+ .||+.+|
T Consensus 185 ~v~v~~f~sE~eLL~~F~~~I~~--------~D---PDIItGyN~~~FDlPYL 226 (903)
T 3qex_A 185 KIIYMPFDNEKELLMEYLNFWQQ--------KT---PVILTGWNVESFAIPYV 226 (903)
T ss_dssp TEEEEEESSHHHHHHHHHHHHHH--------TC---CSEEECSSTTTTHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHHH--------hC---CCEEEecCCccCCHHHH
Confidence 2 35788999999999931 11 139999995 7899987
No 416
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=74.70 E-value=1.5 Score=25.63 Aligned_cols=20 Identities=15% Similarity=0.541 Sum_probs=13.8
Q ss_pred ccccccccccCCHHHHHHhh
Q 025404 15 HKCVACYKQFKRKDHLIEHM 34 (253)
Q Consensus 15 ~~C~~C~k~f~~~~~l~~H~ 34 (253)
-.|..|+..|..+..|+.|+
T Consensus 14 ~eC~lC~vkYs~r~slqDHI 33 (55)
T 2yrk_A 14 PECTLCGVKYSARLSIRDHI 33 (55)
T ss_dssp SCCTTTTCCCCSSSCHHHHH
T ss_pred ccccccCcccccccchhhhh
Confidence 36777777777776666665
No 417
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.45 E-value=3.9 Score=24.21 Aligned_cols=37 Identities=24% Similarity=0.358 Sum_probs=29.9
Q ss_pred CCCcCCcccccccccccccccCChHHHHHHHHHccCCC
Q 025404 68 SKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSA 105 (253)
Q Consensus 68 ~C~~C~~~f~~~~C~~C~k~f~~~~~l~~H~~~h~~~~ 105 (253)
.|.+|+. ...+.|+.|+-.|-+..=++.|....++.+
T Consensus 14 ~C~vC~~-~~kY~CPrC~~~yCSl~C~k~Hk~~C~~~~ 50 (56)
T 2yqq_A 14 VCVICLE-KPKYRCPACRVPYCSVVCFRKHKEQCNPET 50 (56)
T ss_dssp CCTTTCS-CCSEECTTTCCEESSHHHHHHHHHHCCCCC
T ss_pred ccCcCcC-CCeeeCCCCCCCeeCHHHHHHHHhhCcCCc
Confidence 4888888 777789999999999999999987755543
No 418
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=74.19 E-value=2.7 Score=21.53 Aligned_cols=21 Identities=29% Similarity=0.692 Sum_probs=17.3
Q ss_pred ccccccccCChHHHHHHHHHc
Q 025404 81 CNLCMNIFDSPSSLIKHKEAC 101 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h 101 (253)
|..|.+.|+...+|..|+|.-
T Consensus 12 crfckkkysdvknlikhire~ 32 (37)
T 2elu_A 12 CRFCKKKYSDVKNLIKHIRDA 32 (37)
T ss_dssp ETTTTEECSSHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 888888888888888888753
No 419
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=73.95 E-value=0.62 Score=30.19 Aligned_cols=26 Identities=23% Similarity=0.420 Sum_probs=14.3
Q ss_pred CCCCCCcCCcccccc------cccccccccCC
Q 025404 65 GPLSKAHCSGIFSDR------GCNLCMNIFDS 90 (253)
Q Consensus 65 ~~~~C~~C~~~f~~~------~C~~C~k~f~~ 90 (253)
..|.|+.||+..... .|+.|++.|..
T Consensus 26 ~~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~ag 57 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQGTGIWQCSYCDYKFTG 57 (83)
T ss_dssp SCEECSSSCCEEEEEEETTEEEETTTCCEEEC
T ss_pred ccCcCCCCCCcceeccCCCeEECCCCCCEecC
Confidence 456666666533221 27777766654
No 420
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.32 E-value=1.6 Score=27.71 Aligned_cols=24 Identities=25% Similarity=0.479 Sum_probs=16.6
Q ss_pred ccccccccC-------ChHHHHHHHHHccCC
Q 025404 81 CNLCMNIFD-------SPSSLIKHKEACSLS 104 (253)
Q Consensus 81 C~~C~k~f~-------~~~~l~~H~~~h~~~ 104 (253)
|..|++.+. ..+.|.+|++.++.+
T Consensus 31 Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~ 61 (76)
T 2djr_A 31 CRLCGRQVSRGPGVNVGTTALWKHLKSMHRE 61 (76)
T ss_dssp ESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred CCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence 666666665 467899999876643
No 421
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=72.33 E-value=0.78 Score=29.19 Aligned_cols=12 Identities=33% Similarity=0.564 Sum_probs=7.3
Q ss_pred ccccccccccCH
Q 025404 45 KCAVCQKLSKSF 56 (253)
Q Consensus 45 ~C~~C~~~f~~~ 56 (253)
+|+.||....+.
T Consensus 10 ~~PlCG~~L~W~ 21 (95)
T 2k5c_A 10 KCPICGSPLKWE 21 (95)
T ss_dssp ECSSSCCEECHH
T ss_pred cCCcCCCccCHH
Confidence 666666665544
No 422
>3iay_A DNA polymerase delta catalytic subunit; protein-DNA complex, DNA replication, DNA-BI DNA-directed DNA polymerase, exonuclease, hydrolase; HET: DNA DOC DCP; 2.00A {Saccharomyces cerevisiae}
Probab=71.19 E-value=5.4 Score=37.86 Aligned_cols=40 Identities=15% Similarity=0.213 Sum_probs=30.3
Q ss_pred HhhcCCCCHHHHHHHHHHHHhcCCCCCcccccCCCCeEEEeech-hhhhhhh
Q 025404 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSL 243 (253)
Q Consensus 193 ~~l~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~-~~D~~~l 243 (253)
..+....+..++...+.+++.. -+- .||||||+ .||+.+|
T Consensus 305 ~~V~~~~sE~eLL~~F~~~i~~--------~DP---DIIvGyNi~~FDlpyL 345 (919)
T 3iay_A 305 SMIFSHATEEEMLSNWRNFIIK--------VDP---DVIIGYNTTNFDIPYL 345 (919)
T ss_dssp BEEEEESSHHHHHHHHHHHHHH--------HCC---SEEEESSTTTTHHHHH
T ss_pred CeEEECCCHHHHHHHHHHHHHH--------hCC---CEEEecCCccCCHHHH
Confidence 3455567899999999999931 111 39999997 7999988
No 423
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=70.61 E-value=1.7 Score=27.99 Aligned_cols=27 Identities=19% Similarity=0.338 Sum_probs=17.3
Q ss_pred CCCCCCCcCCcccccc------cccccccccCC
Q 025404 64 TGPLSKAHCSGIFSDR------GCNLCMNIFDS 90 (253)
Q Consensus 64 ~~~~~C~~C~~~f~~~------~C~~C~k~f~~ 90 (253)
...|.|+.||+.-... .|..|++.|..
T Consensus 33 ~~ky~CpfCGk~~vkR~a~GIW~C~kCg~~~AG 65 (83)
T 3j21_i 33 RQKHTCPVCGRKAVKRISTGIWQCQKCGATFAG 65 (83)
T ss_dssp HSCBCCSSSCSSCEEEEETTEEEETTTCCEEEC
T ss_pred hcccCCCCCCCceeEecCcCeEEcCCCCCEEeC
Confidence 3467788887763322 28888877764
No 424
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=68.23 E-value=2.4 Score=27.85 Aligned_cols=27 Identities=15% Similarity=0.359 Sum_probs=17.0
Q ss_pred CCCCCCCcCCcccccc------cccccccccCC
Q 025404 64 TGPLSKAHCSGIFSDR------GCNLCMNIFDS 90 (253)
Q Consensus 64 ~~~~~C~~C~~~f~~~------~C~~C~k~f~~ 90 (253)
...|.|+.||+.-... .|..|++.|..
T Consensus 34 ~~ky~CpfCgk~~vkR~a~GIW~C~~C~~~~AG 66 (92)
T 3izc_m 34 HARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAG 66 (92)
T ss_dssp HSCCCCSSSCSSCCEEEETTEEECTTTCCEEEC
T ss_pred hcCCcCCCCCCceeeecccceEEcCCCCCEEeC
Confidence 3567777777654332 27778777764
No 425
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=68.04 E-value=2.2 Score=28.01 Aligned_cols=26 Identities=19% Similarity=0.404 Sum_probs=15.8
Q ss_pred CCCCCCcCCcccccc------cccccccccCC
Q 025404 65 GPLSKAHCSGIFSDR------GCNLCMNIFDS 90 (253)
Q Consensus 65 ~~~~C~~C~~~f~~~------~C~~C~k~f~~ 90 (253)
..|.|+.||+.-... .|..|++.|..
T Consensus 35 ~ky~CpfCgk~~vkR~a~GIW~C~~Cg~~~AG 66 (92)
T 3iz5_m 35 SKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAG 66 (92)
T ss_dssp SCBCCTTTCSSCBEEEETTEEECSSSCCEEEC
T ss_pred ccccCcccCCCeeEecCcceEEcCCCCCEEeC
Confidence 466777777653322 27777776654
No 426
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=67.87 E-value=3.3 Score=26.31 Aligned_cols=21 Identities=29% Similarity=0.594 Sum_probs=9.6
Q ss_pred ccccccccCChHHHHHHHHHcc
Q 025404 81 CNLCMNIFDSPSSLIKHKEACS 102 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~ 102 (253)
|+.||.+++ +..+..|.....
T Consensus 13 C~~Cgd~lK-K~kv~~H~~~Cr 33 (79)
T 1wjv_A 13 CNACGESVK-KIQVEKHVSNCR 33 (79)
T ss_dssp ESSSCCEEE-TTHHHHHHHHCT
T ss_pred cCCCCCeee-cccchhHHhhCC
Confidence 444444444 334455544443
No 427
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=67.33 E-value=1.1 Score=30.85 Aligned_cols=27 Identities=15% Similarity=0.369 Sum_probs=18.6
Q ss_pred CCCCCCCcCCcc-cccc-----cccccccccCC
Q 025404 64 TGPLSKAHCSGI-FSDR-----GCNLCMNIFDS 90 (253)
Q Consensus 64 ~~~~~C~~C~~~-f~~~-----~C~~C~k~f~~ 90 (253)
...|.|+.||+. +... .|..|++.|..
T Consensus 58 ~akytCPfCGk~~vKR~avGIW~C~~Cgk~fAG 90 (116)
T 3cc2_Z 58 NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTG 90 (116)
T ss_dssp HSCEECSSSCCEEEEEEETTEEEETTTCCEEEC
T ss_pred ccCCcCCCCCCceeEecCceeEECCCCCCEEEC
Confidence 457888888873 3221 39999988775
No 428
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=63.93 E-value=3.9 Score=20.43 Aligned_cols=22 Identities=27% Similarity=0.333 Sum_probs=18.3
Q ss_pred cccccccccccCCHHHHHHhhh
Q 025404 14 RHKCVACYKQFKRKDHLIEHMK 35 (253)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~ 35 (253)
.|.|+.|.........|+.|..
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHHH
T ss_pred cccCccccccCcChHHHHHHHH
Confidence 4789999988888888888864
No 429
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=63.08 E-value=2.9 Score=27.16 Aligned_cols=27 Identities=30% Similarity=0.593 Sum_probs=21.8
Q ss_pred CcccccccccccCCHHHHHHhhhhcCCCCCcc
Q 025404 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (253)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (253)
.-..|-+||+.|.. |.+|+.. |.|..|
T Consensus 20 d~iiClecGK~fK~---LkRHL~~--~hgltp 46 (87)
T 2jsp_A 20 DHIVCLECGGSFKS---LKRHLTT--HHSMTP 46 (87)
T ss_dssp SCEECTBTCCEESB---HHHHHHH--TTCSCH
T ss_pred CceEecccchhhHH---HHHHHHH--ccCCCH
Confidence 34589999999994 7799998 767666
No 430
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=61.56 E-value=2 Score=23.39 Aligned_cols=27 Identities=19% Similarity=0.241 Sum_probs=18.2
Q ss_pred CCCCCcccccccccccCCHHHHHHhhhh
Q 025404 9 KRSTARHKCVACYKQFKRKDHLIEHMKI 36 (253)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (253)
.+..-.|.|+.|++.|.. ..+..|.--
T Consensus 4 ~~~~~~~~C~~C~~~i~~-~~~~EH~D~ 30 (39)
T 2i5o_A 4 MAAEDQVPCEKCGSLVPV-WDMPEHMDY 30 (39)
T ss_dssp --CCCEEECTTTCCEEEG-GGHHHHHHH
T ss_pred CCcCCCcccccccCcCCc-ccccchhhH
Confidence 344557889999988876 456777655
No 431
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=61.11 E-value=1.7 Score=32.22 Aligned_cols=24 Identities=29% Similarity=0.549 Sum_probs=19.7
Q ss_pred cccccccccccCCHHHHHHhhhhcCCC
Q 025404 14 RHKCVACYKQFKRKDHLIEHMKISYHS 40 (253)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~H~ 40 (253)
-|+|..|+| +..-.+|.+|++. |.
T Consensus 154 FYKCe~CgK-YvDId~~~~Hlk~--Hg 177 (226)
T 2czr_A 154 FYKCEECGK-YVDIENLEAHLRE--HG 177 (226)
T ss_dssp EEECTTTCC-EEEGGGHHHHHHT--TT
T ss_pred EEehhhcCc-eecHHHHHHHHHH--cC
Confidence 389999998 5667889999998 64
No 432
>2a1r_A Poly(A)-specific ribonuclease PARN; DEDD, nuclease domain, hydrolase-RNA complex; 2.60A {Homo sapiens} PDB: 2a1s_A
Probab=59.19 E-value=6.7 Score=33.72 Aligned_cols=17 Identities=24% Similarity=0.497 Sum_probs=14.4
Q ss_pred CCeEEEeechhhhhhhh
Q 025404 227 KARLLVGHGLEHDLDSL 243 (253)
Q Consensus 227 ~~~~lv~h~~~~D~~~l 243 (253)
.+++|||||.-.||-+|
T Consensus 280 s~KpiVGHN~llDl~~l 296 (430)
T 2a1r_A 280 SGKLVIGHNMLLDVMHT 296 (430)
T ss_dssp HCCEEEESSCHHHHHHH
T ss_pred CCCceEechhHHHHHHH
Confidence 56799999999999754
No 433
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=59.15 E-value=2.6 Score=26.23 Aligned_cols=10 Identities=30% Similarity=0.587 Sum_probs=4.8
Q ss_pred cccccccccc
Q 025404 45 KCAVCQKLSK 54 (253)
Q Consensus 45 ~C~~C~~~f~ 54 (253)
.|..||..|.
T Consensus 30 ~C~~CG~~~e 39 (70)
T 1twf_L 30 ICAECSSKLS 39 (70)
T ss_dssp ECSSSCCEEC
T ss_pred ECCCCCCcce
Confidence 4555554443
No 434
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=59.05 E-value=3.2 Score=26.06 Aligned_cols=26 Identities=15% Similarity=0.132 Sum_probs=14.7
Q ss_pred CCCCCCcCCcccccc------cccccccccCC
Q 025404 65 GPLSKAHCSGIFSDR------GCNLCMNIFDS 90 (253)
Q Consensus 65 ~~~~C~~C~~~f~~~------~C~~C~k~f~~ 90 (253)
..|.|+.|++.-... .|..|++.|..
T Consensus 26 ~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AG 57 (73)
T 1ffk_W 26 KKYKCPVCGFPKLKRASTSIWVCGHCGYKIAG 57 (73)
T ss_pred cCccCCCCCCceeEEEEeEEEECCCCCcEEEC
Confidence 356677776632221 27777777664
No 435
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=58.98 E-value=2.2 Score=31.42 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=17.2
Q ss_pred CCCCCcCCccccc----cccccccccc
Q 025404 66 PLSKAHCSGIFSD----RGCNLCMNIF 88 (253)
Q Consensus 66 ~~~C~~C~~~f~~----~~C~~C~k~f 88 (253)
.|.|..||+.|.. ..|+.||...
T Consensus 132 ~y~C~~Cg~~~~~~~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 132 RYVCIGCGRKFSTLPPGGVCPDCGSKV 158 (165)
T ss_dssp CEEESSSCCEESSCCGGGBCTTTCCBE
T ss_pred EEECCCCCCcccCCCCCCcCCCCCCcc
Confidence 5779999998873 2499998653
No 436
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=57.94 E-value=2.4 Score=28.40 Aligned_cols=26 Identities=19% Similarity=0.493 Sum_probs=15.4
Q ss_pred CCCCCCcCCcccccc------cccccccccCC
Q 025404 65 GPLSKAHCSGIFSDR------GCNLCMNIFDS 90 (253)
Q Consensus 65 ~~~~C~~C~~~f~~~------~C~~C~k~f~~ 90 (253)
..|.|+.||+.-... .|..|++.|..
T Consensus 35 aky~CpfCgk~~vKR~a~GIW~C~kCg~~~AG 66 (103)
T 4a17_Y 35 AKYGCPFCGKVAVKRAAVGIWKCKPCKKIIAG 66 (103)
T ss_dssp SCEECTTTCCEEEEEEETTEEEETTTTEEEEC
T ss_pred cCCCCCCCCCceeeecCcceEEcCCCCCEEeC
Confidence 456677776553322 27777776654
No 437
>3k59_A POL II, DNA polymerase II; protein-DNA complex, DNA damage, DNA repair, DNA-binding; HET: DNA DOC DCP; 1.92A {Escherichia coli} PDB: 3k57_A* 3k58_A* 3k5l_A* 3k5m_A* 3k5n_A* 3k5o_A* 3maq_A* 1q8i_A*
Probab=57.35 E-value=18 Score=33.74 Aligned_cols=39 Identities=18% Similarity=0.377 Sum_probs=28.1
Q ss_pred hcCCCCHHHHHHHHHHHHhcCCCCCcccccCCCCeEEEeech-hhhhhhhc
Q 025404 195 IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR 244 (253)
Q Consensus 195 l~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~-~~D~~~l~ 244 (253)
+....+-.++...+.+++.. -+- .||||||+ .||+.+|.
T Consensus 198 V~~f~~E~~lL~~f~~~i~~--------~dP---Dii~g~N~~~FD~pyL~ 237 (786)
T 3k59_A 198 LEYVASRPQLLEKLNAWFAN--------YDP---DVIIGWNVVQFDLRMLQ 237 (786)
T ss_dssp EEEESSHHHHHHHHHHHHHH--------HCC---SEEEESSTTTTHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHHHH--------cCC---CEEEecCCccCcHHHHH
Confidence 34446788999999999842 111 29999995 58999884
No 438
>3ikm_A DNA polymerase subunit gamma-1; human mitochondrial DNA polymerase, disease mutation, DNA replication, DNA-binding, DNA-directed DNA polymerase; HET: DNA; 3.24A {Homo sapiens}
Probab=56.98 E-value=3.5 Score=39.44 Aligned_cols=22 Identities=32% Similarity=0.619 Sum_probs=17.3
Q ss_pred CCeEEEeechhhhhhhhcCCCC
Q 025404 227 KARLLVGHGLEHDLDSLRMNYP 248 (253)
Q Consensus 227 ~~~~lv~h~~~~D~~~l~~~~~ 248 (253)
..+|+|||||.||-.-+.=.|-
T Consensus 193 ~~rlIVGHNVsyDRARI~EeY~ 214 (1172)
T 3ikm_A 193 QEQLVVGHNVSFDRAHIREQYL 214 (1172)
T ss_dssp SCCCCBCBCSSSSTTGGGTSSC
T ss_pred CccEEEeCCcchhHHHHHHHHh
Confidence 5689999999999877654443
No 439
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=54.89 E-value=4.3 Score=28.40 Aligned_cols=31 Identities=26% Similarity=0.543 Sum_probs=19.8
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCccccccccccccc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMN 86 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~k 86 (253)
.|..|++.|... .+.+.|..||+.| |..|..
T Consensus 71 ~C~~C~~~Fs~~-------~RrHHCR~CG~vf----C~~Cs~ 101 (125)
T 1joc_A 71 NCMACGKGFSVT-------VRRHHCRQCGNIF----CAECSA 101 (125)
T ss_dssp BCTTTCCBCCSS-------SCCEECTTTCCEE----CGGGSC
T ss_pred CCcCcCCccccc-------cccccCCCCCeEE----ChHHhC
Confidence 677787777532 3445677777777 666653
No 440
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=54.70 E-value=4.6 Score=26.00 Aligned_cols=25 Identities=12% Similarity=0.274 Sum_probs=13.4
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCccc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f 76 (253)
.|..|++.|... .+.+.|..||+.|
T Consensus 23 ~C~~C~~~Fs~~-------~RrHHCR~CG~v~ 47 (84)
T 1z2q_A 23 ACNGCGCVFTTT-------VRRHHCRNCGYVL 47 (84)
T ss_dssp BCTTTCCBCCTT-------SCCEECTTTCCEE
T ss_pred CCcCcCCccccc-------hhcccccCCCcEE
Confidence 566666666432 2334566666655
No 441
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=53.78 E-value=9.8 Score=23.95 Aligned_cols=17 Identities=12% Similarity=0.165 Sum_probs=13.5
Q ss_pred ccccccccCChHHHHHH
Q 025404 81 CNLCMNIFDSPSSLIKH 97 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H 97 (253)
|+.||..+......++-
T Consensus 39 C~~CGE~~~~~e~~~~~ 55 (78)
T 3ga8_A 39 CVHCEESIMNKEESDAF 55 (78)
T ss_dssp ETTTCCEECCHHHHHHH
T ss_pred CCCCCCEEECHHHHHHH
Confidence 99999998887776653
No 442
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=53.15 E-value=6.9 Score=29.90 Aligned_cols=22 Identities=23% Similarity=0.330 Sum_probs=18.7
Q ss_pred cccccccccCC-hHHHHHHHHHc
Q 025404 80 GCNLCMNIFDS-PSSLIKHKEAC 101 (253)
Q Consensus 80 ~C~~C~k~f~~-~~~l~~H~~~h 101 (253)
.|..|+..|.+ ...|+.|+..|
T Consensus 171 ~C~~C~~~f~n~~~~LK~HL~~e 193 (204)
T 3sp4_A 171 KCWRCGETFGRHFTKLKAHLQEE 193 (204)
T ss_dssp BCTTTCCBCTTCHHHHHHHHHHH
T ss_pred eeCCCCchhhcccHHHHHHHHHH
Confidence 38889999987 88999998776
No 443
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=52.43 E-value=8.2 Score=24.17 Aligned_cols=24 Identities=29% Similarity=0.502 Sum_probs=16.0
Q ss_pred ccccccccC---ChHHHHHHHHHccCC
Q 025404 81 CNLCMNIFD---SPSSLIKHKEACSLS 104 (253)
Q Consensus 81 C~~C~k~f~---~~~~l~~H~~~h~~~ 104 (253)
|..|++.+. ..++|.+|++.++.+
T Consensus 32 Ck~C~~~l~~~g~TSnL~rHL~~~H~~ 58 (73)
T 2ct5_A 32 CRICMAQIAYSGNTSNLSYHLEKNHPE 58 (73)
T ss_dssp ETTTTEECCCCSSTHHHHHHHHHSCHH
T ss_pred CCCCCccccCCCChHhHHHHHHHHCHH
Confidence 555555533 468899999877643
No 444
>1vk0_A Hypothetical protein; homohexamer, AT5G06450, struc genomics, protein structure initiative, center for eukaryot structural genomics, CESG; 2.10A {Arabidopsis thaliana} SCOP: c.55.3.5 PDB: 2q3s_A
Probab=51.11 E-value=9.2 Score=29.22 Aligned_cols=27 Identities=33% Similarity=0.479 Sum_probs=22.0
Q ss_pred HHHHHHhcCCCCCcccccCCCCeEEEeechhhhhhhhcC
Q 025404 207 KILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM 245 (253)
Q Consensus 207 ~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~~ 245 (253)
.|.+++.+ .+.+.|||++.+|+..|+-
T Consensus 99 ~L~~lL~d------------~~i~Kvg~~~~~D~~~L~~ 125 (206)
T 1vk0_A 99 DLYRFFAS------------KFVTFVGVQIEEDLDLLRE 125 (206)
T ss_dssp HHHHHHTC------------SSSEEEESSCHHHHHHHHH
T ss_pred HHHHHhcC------------CCceEEEeccHHHHHHHHH
Confidence 47788843 5679999999999999864
No 445
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=50.97 E-value=4.8 Score=27.98 Aligned_cols=25 Identities=16% Similarity=0.320 Sum_probs=14.2
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCccc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f 76 (253)
.|..|+..|... .+.+.|..||+.|
T Consensus 21 ~C~~C~~~Fs~~-------~RkHHCR~CG~if 45 (120)
T 1y02_A 21 SCKSCGAHFANT-------ARKQTCLDCKKNF 45 (120)
T ss_dssp CCTTTCCCCSSG-------GGCEECTTTCCEE
T ss_pred cccCcCCccccc-------cccccCCCCCCee
Confidence 566666666532 1233566666666
No 446
>3saf_A Exosome component 10; exoribonuclease, RNA exosome, hydrolase; 2.50A {Homo sapiens} PDB: 3sag_A 3sah_A 2cpr_A
Probab=50.46 E-value=18 Score=31.07 Aligned_cols=27 Identities=30% Similarity=0.335 Sum_probs=21.1
Q ss_pred HHHHHHHhcCCCCCcccccCCCCeEEEeechhhhhhhhc
Q 025404 206 DKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR 244 (253)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~ 244 (253)
..|..++.+ .+.+.||||+.+|+.+|.
T Consensus 172 ~~L~~lL~d------------p~i~KV~H~~k~Dl~~L~ 198 (428)
T 3saf_A 172 YILNESLTD------------PAIVKVFHGADSDIEWLQ 198 (428)
T ss_dssp GGGHHHHTC------------TTSEEEESSCHHHHHHHH
T ss_pred HHHHHHHcC------------CCceEEEeehHHHHHHHH
Confidence 456777832 456789999999999995
No 447
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=49.49 E-value=7.8 Score=23.49 Aligned_cols=11 Identities=18% Similarity=0.193 Sum_probs=5.0
Q ss_pred CCCCcCCcccc
Q 025404 67 LSKAHCSGIFS 77 (253)
Q Consensus 67 ~~C~~C~~~f~ 77 (253)
|.|..|+..+.
T Consensus 22 Y~C~~Cg~~~~ 32 (63)
T 3h0g_L 22 YLCADCGARNT 32 (63)
T ss_dssp CBCSSSCCBCC
T ss_pred EECCCCCCeee
Confidence 44444444443
No 448
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=48.30 E-value=7 Score=24.33 Aligned_cols=30 Identities=23% Similarity=0.578 Sum_probs=20.1
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCcccccccccccc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCM 85 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~ 85 (253)
.|..|++.|... .+.+.|..||+.| |..|.
T Consensus 13 ~C~~C~~~F~~~-------~RrHHCR~CG~v~----C~~Cs 42 (73)
T 1vfy_A 13 ACMICSKKFSLL-------NRKHHCRSCGGVF----CQEHS 42 (73)
T ss_dssp BCTTTCCBCBTT-------BCCEECTTTCCEE----CGGGS
T ss_pred cccCCCCccCCc-------cccccCCCCCEEE----ccccc
Confidence 688888887632 3455688888777 55554
No 449
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=46.59 E-value=7.2 Score=25.45 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=14.0
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCccc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f 76 (253)
.|..|++.|... .+.+.|..||..|
T Consensus 22 ~C~~C~~~F~~~-------~RrhhCr~CG~v~ 46 (90)
T 3t7l_A 22 NCMNCQVKFTFT-------KRRHHCRACGKVF 46 (90)
T ss_dssp BCTTTCCBCCSS-------SCCEECTTTCCEE
T ss_pred cCcCCCCcccch-------hhCccccCCCCEE
Confidence 466666666421 2344566666666
No 450
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=46.58 E-value=6.1 Score=30.50 Aligned_cols=9 Identities=22% Similarity=0.471 Sum_probs=3.9
Q ss_pred ccccccccc
Q 025404 45 KCAVCQKLS 53 (253)
Q Consensus 45 ~C~~C~~~f 53 (253)
.|..|++.|
T Consensus 163 ~C~~C~~~F 171 (220)
T 1dvp_A 163 VCHRCRVEF 171 (220)
T ss_dssp BCTTTCCBC
T ss_pred ccCCCCCcc
Confidence 344444444
No 451
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=46.41 E-value=5 Score=22.66 Aligned_cols=10 Identities=30% Similarity=0.571 Sum_probs=6.7
Q ss_pred cccccccccc
Q 025404 45 KCAVCQKLSK 54 (253)
Q Consensus 45 ~C~~C~~~f~ 54 (253)
.|..||..+-
T Consensus 6 ~C~vCGyvyd 15 (46)
T 6rxn_A 6 VCNVCGYEYD 15 (46)
T ss_dssp EETTTCCEEC
T ss_pred ECCCCCeEEe
Confidence 6777776664
No 452
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=44.98 E-value=6.3 Score=28.24 Aligned_cols=59 Identities=22% Similarity=0.423 Sum_probs=37.8
Q ss_pred ccccccccccCCHHHHH---HhhhhcCCCCCcc-ccccccccccCHHHHhhhhCCCCCCCcCCcccccccccccc
Q 025404 15 HKCVACYKQFKRKDHLI---EHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCM 85 (253)
Q Consensus 15 ~~C~~C~k~f~~~~~l~---~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~ 85 (253)
.+|+-|++.|.-..-=. .|... -...+. .|..|++..+-. -.|+.|+..|...-|.+|.
T Consensus 28 lr~pCC~k~y~Cr~CHde~~dH~l~--r~~~~~vlCg~C~~~q~~~----------~~C~~Cg~~f~~Y~C~~C~ 90 (143)
T 2dkt_A 28 LKAPCCDKLYTCRLCHDTNEDHQLD--RFKVKEVQCINCEKLQHAQ----------QTCEDCSTLFGEYYCSICH 90 (143)
T ss_dssp EEETTTTEEESSHHHHHHTSSSCCC--SSSCCCEEESSSCCEECSC----------SBCSSSCCBSCSEECSSSC
T ss_pred EECCCCCCccchhhhhccccccccc--hhccceeeecccCcccccc----------CcCCCCCccceeeEeceee
Confidence 45667888887654322 22211 123344 788888766432 1589999999998899994
No 453
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=44.65 E-value=7 Score=30.36 Aligned_cols=10 Identities=20% Similarity=0.524 Sum_probs=4.4
Q ss_pred cccccccccc
Q 025404 45 KCAVCQKLSK 54 (253)
Q Consensus 45 ~C~~C~~~f~ 54 (253)
.|..|++.|.
T Consensus 166 ~C~~C~~~F~ 175 (226)
T 3zyq_A 166 ECHRCRVQFG 175 (226)
T ss_dssp BCTTTCCBCB
T ss_pred CCcCcCCCCC
Confidence 3444444443
No 454
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=43.76 E-value=9 Score=24.45 Aligned_cols=31 Identities=29% Similarity=0.610 Sum_probs=21.6
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCccccccccccccc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMN 86 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~k 86 (253)
.|..|++.|... .+.+.|..||+.| |..|..
T Consensus 21 ~C~~C~~~Fs~~-------~RrHHCR~CG~v~----C~~Cs~ 51 (82)
T 2yw8_A 21 HCRQCEKEFSIS-------RRKHHCRNCGHIF----CNTCSS 51 (82)
T ss_dssp BCTTTCCBCBTT-------BCCEECTTTCCEE----CSGGGC
T ss_pred cccCcCCcccCc-------cccccCCCCCCEE----ChHHhC
Confidence 788888888631 3455688888877 666653
No 455
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=43.10 E-value=5.8 Score=23.26 Aligned_cols=10 Identities=30% Similarity=0.846 Sum_probs=6.3
Q ss_pred cccccccccc
Q 025404 45 KCAVCQKLSK 54 (253)
Q Consensus 45 ~C~~C~~~f~ 54 (253)
.|..||..+-
T Consensus 5 ~C~vCGyvYd 14 (54)
T 4rxn_A 5 TCTVCGYIYD 14 (54)
T ss_dssp EETTTCCEEC
T ss_pred ECCCCCeEEC
Confidence 5667766554
No 456
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=42.86 E-value=1.9 Score=39.17 Aligned_cols=31 Identities=23% Similarity=0.453 Sum_probs=17.8
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCccc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f 76 (253)
.|+.|.+-+....+-+-| ..|..|+.||-..
T Consensus 69 mC~~C~~EY~dp~dRRfH-Aqp~aCp~CGP~l 99 (657)
T 3ttc_A 69 LCPACDKEYRDPLDRRFH-AQPVACPECGPYL 99 (657)
T ss_dssp CCHHHHHHHHCTTSTTTT-CTTCCCTTTSCCE
T ss_pred CChHHHHHhCCCCCCcCc-CCCCcCcccCccc
Confidence 666666666666554444 4555666665543
No 457
>3d45_A Poly(A)-specific ribonuclease PARN; CAP analogue, exonuclease, hydrolase, magnesium, metal nonsense-mediated mRNA decay, nucleus; HET: 7MG GDP; 3.00A {Mus musculus}
Probab=41.27 E-value=12 Score=32.94 Aligned_cols=17 Identities=29% Similarity=0.503 Sum_probs=14.7
Q ss_pred CCeEEEeechhhhhhhh
Q 025404 227 KARLLVGHGLEHDLDSL 243 (253)
Q Consensus 227 ~~~~lv~h~~~~D~~~l 243 (253)
.+.+|||||.-.||-+|
T Consensus 275 ~~kpiVgHN~l~Dl~~l 291 (507)
T 3d45_A 275 SGKLVVGHNMLLDVMHT 291 (507)
T ss_dssp HCCEEEESSCHHHHHHH
T ss_pred CCCeEEEechHHHHHHH
Confidence 46799999999999775
No 458
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=40.89 E-value=2.4 Score=39.29 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=16.7
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCcc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGI 75 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~ 75 (253)
.|+.|.+-+....+-+-| ..|-.|+.||-.
T Consensus 163 mC~~C~~EY~dp~~RRfh-Aqp~aC~~CGP~ 192 (761)
T 3vth_A 163 MCEKCSREYHDPHDRRFH-AQPVACFDCGPS 192 (761)
T ss_dssp CCHHHHHHHTCTTSTTTT-CTTCCCTTTSCC
T ss_pred CCHHHHHHhcCccccccc-CCCCcCCccCCe
Confidence 566666666555554444 445556666543
No 459
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=40.48 E-value=14 Score=20.88 Aligned_cols=9 Identities=22% Similarity=0.833 Sum_probs=5.2
Q ss_pred ccccccccC
Q 025404 81 CNLCMNIFD 89 (253)
Q Consensus 81 C~~C~k~f~ 89 (253)
|..||..|.
T Consensus 27 C~~CG~v~~ 35 (50)
T 1pft_A 27 CAKCGYVIE 35 (50)
T ss_dssp ESSSCCBCC
T ss_pred CcccCCccc
Confidence 666665554
No 460
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=40.36 E-value=9.9 Score=22.01 Aligned_cols=10 Identities=30% Similarity=0.600 Sum_probs=6.1
Q ss_pred cccccccccc
Q 025404 45 KCAVCQKLSK 54 (253)
Q Consensus 45 ~C~~C~~~f~ 54 (253)
.|..||..+-
T Consensus 5 ~C~~CGyvYd 14 (52)
T 1e8j_A 5 VCTVCGYEYD 14 (52)
T ss_dssp ECSSSCCCCC
T ss_pred EeCCCCeEEc
Confidence 5666765553
No 461
>2py5_A DNA polymerase; protein-DNA complex, replication, transferase/DNA complex; HET: DNA; 1.60A {Bacillus phage PHI29} SCOP: c.55.3.5 e.8.1.1 PDB: 1xhz_A* 1xhx_A* 2ex3_A* 1xi1_A* 2pyj_A* 2pyl_A* 2pzs_A*
Probab=39.82 E-value=25 Score=31.45 Aligned_cols=17 Identities=18% Similarity=-0.056 Sum_probs=14.2
Q ss_pred CeEEEeechhhhhhhhc
Q 025404 228 ARLLVGHGLEHDLDSLR 244 (253)
Q Consensus 228 ~~~lv~h~~~~D~~~l~ 244 (253)
+.++++||+.||+.||-
T Consensus 55 ~~~i~~hNl~FD~~~l~ 71 (575)
T 2py5_A 55 QADLYFHNLKFAGAFII 71 (575)
T ss_dssp CCEEEETTHHHHHHHHH
T ss_pred CCEEEEEChhhhHHHHH
Confidence 34788899999999884
No 462
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=39.24 E-value=37 Score=23.46 Aligned_cols=27 Identities=19% Similarity=0.509 Sum_probs=23.1
Q ss_pred CCCCcccccccccccCCHHHHHHhhhh
Q 025404 10 RSTARHKCVACYKQFKRKDHLIEHMKI 36 (253)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (253)
.++-+..|=.|.+.|.....+..|++.
T Consensus 11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~ 37 (121)
T 1wir_A 11 HGRQHTPCLFCDRLFASAEETFSHCKL 37 (121)
T ss_dssp CCCCCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCCceeEecCCCcccCHHHHHHHHHH
Confidence 456778999999999999999999987
No 463
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=38.84 E-value=2.2 Score=39.68 Aligned_cols=30 Identities=20% Similarity=0.349 Sum_probs=16.6
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCcc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGI 75 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~ 75 (253)
.|+.|.+-+....+-+-| ..|-.|+.||-.
T Consensus 158 mC~~C~~EY~dp~dRRfh-Aqp~aC~~CGP~ 187 (772)
T 4g9i_A 158 MCDFCRSEYEDPLNRRYH-AEPTACPVCGPS 187 (772)
T ss_dssp CCHHHHHHHHCSSSTTTT-CTTCCCTTTSCC
T ss_pred CChhHHHHhCCCCCCCCc-CCCCCCccCCce
Confidence 566665555555554444 455566666644
No 464
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.41 E-value=12 Score=23.93 Aligned_cols=30 Identities=23% Similarity=0.598 Sum_probs=20.0
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCcccccccccccc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCM 85 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~ 85 (253)
.|..|++.|... .+.+.|..||+.| |..|.
T Consensus 16 ~C~~C~~~F~~~-------~RrHHCR~CG~vf----C~~Cs 45 (84)
T 1x4u_A 16 NCTGCSATFSVL-------KKRRSCSNCGNSF----CSRCC 45 (84)
T ss_dssp SCSSSCCCCCSS-------SCCEECSSSCCEE----CTTTS
T ss_pred cCcCcCCccccc-------hhhhhhcCCCcEE----Chhhc
Confidence 688888887532 3445688888777 66664
No 465
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=38.26 E-value=7.9 Score=26.66 Aligned_cols=10 Identities=30% Similarity=0.796 Sum_probs=4.7
Q ss_pred cccccccccc
Q 025404 45 KCAVCQKLSK 54 (253)
Q Consensus 45 ~C~~C~~~f~ 54 (253)
.|..||..|.
T Consensus 75 ~C~~CG~~~e 84 (119)
T 2kdx_A 75 ECKDCSHVFK 84 (119)
T ss_dssp ECSSSSCEEC
T ss_pred EcCCCCCEEe
Confidence 4444544443
No 466
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=37.54 E-value=4 Score=27.01 Aligned_cols=35 Identities=20% Similarity=0.511 Sum_probs=22.9
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCccccccc-cccccc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRG-CNLCMN 86 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~-C~~C~k 86 (253)
.|+.|.....+. .+.|.|..|++.|.... |+.|+.
T Consensus 34 ~CP~Cq~eL~~~-------g~~~hC~~C~~~f~~~a~CPdC~q 69 (101)
T 2jne_A 34 HCPQCQHVLDQD-------NGHARCRSCGEFIEMKALCPDCHQ 69 (101)
T ss_dssp BCSSSCSBEEEE-------TTEEEETTTCCEEEEEEECTTTCS
T ss_pred cCccCCCcceec-------CCEEECccccchhhccccCcchhh
Confidence 788887665442 22345888888777554 777764
No 467
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=36.48 E-value=13 Score=24.08 Aligned_cols=31 Identities=26% Similarity=0.629 Sum_probs=21.8
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCccccccccccccc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMN 86 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f~~~~C~~C~k 86 (253)
.|..|++.|... .+.+.|..||+.| |..|..
T Consensus 11 ~C~~C~~~F~~~-------~RrHHCR~CG~vf----C~~Cs~ 41 (88)
T 1wfk_A 11 RCYGCAVKFTLF-------KKEYGCKNCGRAF----CNGCLS 41 (88)
T ss_dssp BCTTTCCBCCSS-------SCEEECSSSCCEE----ETTTSC
T ss_pred CCcCcCCcccCc-------cccccCCCCCCEE----ChhHcC
Confidence 788898888743 3345688888888 666653
No 468
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.08 E-value=43 Score=21.57 Aligned_cols=36 Identities=8% Similarity=0.191 Sum_probs=26.9
Q ss_pred CCCCCCcCCccccccccc-ccccccCChHHHHHHHHHc
Q 025404 65 GPLSKAHCSGIFSDRGCN-LCMNIFDSPSSLIKHKEAC 101 (253)
Q Consensus 65 ~~~~C~~C~~~f~~~~C~-~C~k~f~~~~~l~~H~~~h 101 (253)
..|.|++|...|...... .||.+|-. ..+..++..+
T Consensus 6 ~~~~CPI~~~~~~dPV~~~~cGh~f~r-~cI~~~l~~~ 42 (94)
T 2yu4_A 6 SGFTCPITKEEMKKPVKNKVCGHTYEE-DAIVRMIESR 42 (94)
T ss_dssp SCCBCTTTCSBCSSEEEESSSCCEEEH-HHHHHHHHHH
T ss_pred cEeECcCcCchhcCCEEcCCCCCeecH-HHHHHHHHHc
Confidence 357799999998887766 59999984 4556676655
No 469
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=35.72 E-value=7.7 Score=24.16 Aligned_cols=8 Identities=25% Similarity=0.804 Sum_probs=3.9
Q ss_pred ccccccccC
Q 025404 81 CNLCMNIFD 89 (253)
Q Consensus 81 C~~C~k~f~ 89 (253)
|+ ||+.+.
T Consensus 24 C~-CG~~~~ 31 (71)
T 1gh9_A 24 CV-CGRTVN 31 (71)
T ss_dssp ET-TTEEEE
T ss_pred CC-CCCeee
Confidence 55 555443
No 470
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=35.22 E-value=16 Score=27.91 Aligned_cols=19 Identities=37% Similarity=0.686 Sum_probs=13.3
Q ss_pred ccccccccccC-HHHHhhhh
Q 025404 45 KCAVCQKLSKS-FESLREHL 63 (253)
Q Consensus 45 ~C~~C~~~f~~-~~~l~~H~ 63 (253)
.|..|+..|.+ -..|+.|+
T Consensus 171 ~C~~C~~~f~n~~~~LK~HL 190 (204)
T 3sp4_A 171 KCWRCGETFGRHFTKLKAHL 190 (204)
T ss_dssp BCTTTCCBCTTCHHHHHHHH
T ss_pred eeCCCCchhhcccHHHHHHH
Confidence 77777777765 67777775
No 471
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=34.71 E-value=14 Score=28.18 Aligned_cols=21 Identities=19% Similarity=0.396 Sum_probs=13.5
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCC
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCS 73 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~ 73 (253)
.|..||..+.. ..|+.|+.|+
T Consensus 173 ~C~~CG~i~~g--------~~p~~CP~C~ 193 (202)
T 1yuz_A 173 LCPICGYIHKG--------EDFEKCPICF 193 (202)
T ss_dssp ECSSSCCEEES--------SCCSBCTTTC
T ss_pred EECCCCCEEcC--------cCCCCCCCCC
Confidence 78888776542 3466676666
No 472
>2e6m_A Werner syndrome ATP-dependent helicase homolog; APO form, hydrolase; 2.00A {Mus musculus} PDB: 2e6l_A 2fby_A 2fbv_A 2fbx_A 2fbt_A 2fc0_A*
Probab=34.18 E-value=29 Score=26.04 Aligned_cols=28 Identities=29% Similarity=0.265 Sum_probs=21.8
Q ss_pred HHHHHHHhcCCCCCcccccCCCCeEEEeechhhhhhhhcC
Q 025404 206 DKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM 245 (253)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~~ 245 (253)
..|..++.+ .+.+.||||+.+|+.+|.-
T Consensus 86 ~~L~~lL~d------------~~i~Kv~~~~k~D~~~L~~ 113 (208)
T 2e6m_A 86 QGLKMLLEN------------KSIKKAGVGIEGDQWKLLR 113 (208)
T ss_dssp HHHHHHHTC------------TTSEEEESSHHHHHHHHHH
T ss_pred HHHHHHhcC------------CCceEEEEeeHHHHHHHHH
Confidence 467888832 4568899999999999853
No 473
>2gv9_A DNA polymerase; polymerase alpha fold, transferase; HET: DNA; 2.68A {Human herpesvirus 1} PDB: 1dml_B*
Probab=33.47 E-value=29 Score=33.97 Aligned_cols=39 Identities=10% Similarity=0.075 Sum_probs=28.8
Q ss_pred hcCCCCHHHHHHHHHHHHhcCCCCCcccccCCCCeEEEeech-hhhhhhhc
Q 025404 195 IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR 244 (253)
Q Consensus 195 l~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~-~~D~~~l~ 244 (253)
+....+-.++...+.++|.. .+| .||||||+ .||+.+|.
T Consensus 395 V~~~~sE~eLL~~F~~~I~~------~DP-----DIIvGyNi~~FDlpyL~ 434 (1193)
T 2gv9_A 395 VLEFDSEFEMLLAFMTLVKQ------YGP-----EFVTGYNIINFDWPFLL 434 (1193)
T ss_dssp EEEESSHHHHHHHHHHHHHH------HCC-----SEEEESSTTTTHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHHh------cCC-----CEEEEcCCcCccHHHHH
Confidence 44456788999999999942 111 29999995 79999874
No 474
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=31.83 E-value=21 Score=21.31 Aligned_cols=21 Identities=14% Similarity=0.116 Sum_probs=11.2
Q ss_pred CCcCCcccccccccccccccC
Q 025404 69 KAHCSGIFSDRGCNLCMNIFD 89 (253)
Q Consensus 69 C~~C~~~f~~~~C~~C~k~f~ 89 (253)
|+.|+.-.-...|+.||....
T Consensus 9 C~~CgvYTLk~~CP~CG~~T~ 29 (60)
T 2apo_B 9 CPKCGLYTLKEICPKCGEKTV 29 (60)
T ss_dssp CTTTCCEESSSBCSSSCSBCB
T ss_pred CCCCCCEeccccCcCCCCcCC
Confidence 555554433444666765544
No 475
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=31.43 E-value=8.8 Score=24.57 Aligned_cols=10 Identities=20% Similarity=0.497 Sum_probs=6.7
Q ss_pred cccccccccc
Q 025404 45 KCAVCQKLSK 54 (253)
Q Consensus 45 ~C~~C~~~f~ 54 (253)
.|..||..+.
T Consensus 29 ~C~vCGyvYD 38 (81)
T 2kn9_A 29 RCIQCGFEYD 38 (81)
T ss_dssp EETTTCCEEE
T ss_pred EeCCCCEEEc
Confidence 6777776654
No 476
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=31.28 E-value=23 Score=21.05 Aligned_cols=30 Identities=17% Similarity=0.255 Sum_probs=17.5
Q ss_pred CCCcCCc---ccccccccccccccCChHHHHHH
Q 025404 68 SKAHCSG---IFSDRGCNLCMNIFDSPSSLIKH 97 (253)
Q Consensus 68 ~C~~C~~---~f~~~~C~~C~k~f~~~~~l~~H 97 (253)
.|.+|+. ......|+.|+..|-+..=.+.|
T Consensus 13 ~C~vC~~~~~~~akY~CPrC~~rYCSl~C~k~H 45 (59)
T 1x4s_A 13 PCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTH 45 (59)
T ss_dssp EECSSCTTCCEEECEECTTTCCEESSHHHHHHH
T ss_pred cCcCCCCCcCCCccccCcCCCCCccChHHHHHH
Confidence 3555553 33444567777666666666655
No 477
>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}
Probab=30.97 E-value=48 Score=19.25 Aligned_cols=17 Identities=29% Similarity=0.737 Sum_probs=7.4
Q ss_pred cccccccccCHHHHhhh
Q 025404 46 CAVCQKLSKSFESLREH 62 (253)
Q Consensus 46 C~~C~~~f~~~~~l~~H 62 (253)
|++|..-..+.-.|..|
T Consensus 6 C~~C~~ECET~kEl~~H 22 (57)
T 2k9h_A 6 CDVCHHECETAKELESH 22 (57)
T ss_dssp CTTTCCBCSSTTTHHHH
T ss_pred hhHHHhhhhhHHHHHHH
Confidence 44444444444444444
No 478
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=30.30 E-value=13 Score=23.64 Aligned_cols=14 Identities=21% Similarity=0.565 Sum_probs=11.5
Q ss_pred CCcccccccccccC
Q 025404 12 TARHKCVACYKQFK 25 (253)
Q Consensus 12 ~k~~~C~~C~k~f~ 25 (253)
.+|..|+.||..|.
T Consensus 54 g~~~RC~eCG~~fk 67 (80)
T 2odx_A 54 NEVARCWECGSVYK 67 (80)
T ss_dssp TCEEECSSSCCEEE
T ss_pred CCCeECCCCCeEEE
Confidence 37889999998876
No 479
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=28.81 E-value=11 Score=21.87 Aligned_cols=10 Identities=20% Similarity=0.803 Sum_probs=6.3
Q ss_pred cccccccccc
Q 025404 45 KCAVCQKLSK 54 (253)
Q Consensus 45 ~C~~C~~~f~ 54 (253)
.|..||..+-
T Consensus 4 ~C~~CGyvYd 13 (52)
T 1yk4_A 4 SCKICGYIYD 13 (52)
T ss_dssp EESSSSCEEE
T ss_pred EeCCCCeEEC
Confidence 5677776654
No 480
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=28.61 E-value=15 Score=23.14 Aligned_cols=15 Identities=20% Similarity=0.335 Sum_probs=12.5
Q ss_pred CcccccccccccCCH
Q 025404 13 ARHKCVACYKQFKRK 27 (253)
Q Consensus 13 k~~~C~~C~k~f~~~ 27 (253)
-||.|..|++.|-..
T Consensus 28 lpf~C~~C~~~FC~~ 42 (75)
T 1wys_A 28 LPFVCDGCSGIFCLE 42 (75)
T ss_dssp CCEECTTTCCEECST
T ss_pred eeeECcccCcCcCcc
Confidence 489999999998764
No 481
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=28.30 E-value=11 Score=22.18 Aligned_cols=10 Identities=30% Similarity=0.836 Sum_probs=6.7
Q ss_pred cccccccccc
Q 025404 45 KCAVCQKLSK 54 (253)
Q Consensus 45 ~C~~C~~~f~ 54 (253)
.|..||..+.
T Consensus 5 ~C~~CGyvYd 14 (55)
T 2v3b_B 5 QCVVCGFIYD 14 (55)
T ss_dssp EETTTCCEEE
T ss_pred EeCCCCeEEC
Confidence 6777776654
No 482
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=28.18 E-value=1.1e+02 Score=20.26 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=15.4
Q ss_pred ccccccCChHHHHHHHHH
Q 025404 83 LCMNIFDSPSSLIKHKEA 100 (253)
Q Consensus 83 ~C~k~f~~~~~l~~H~~~ 100 (253)
.|.++|.+...|+.|...
T Consensus 66 ~CkrtyLs~rdlqaHI~~ 83 (101)
T 3vk6_A 66 GCKRTYLSQRDLQAHINH 83 (101)
T ss_dssp CCCCCCSSHHHHHHHHHH
T ss_pred CHHHHhcCHHHHHHHHHH
Confidence 588999999999999863
No 483
>3pv8_A DNA polymerase I; DNA polymerase I, protein-DNA complex, thymine-adenine, CLOS conformation; HET: DNA 2DT D3T; 1.52A {Geobacillus kaustophilus} PDB: 3px0_A* 3px4_A* 3px6_A* 3thv_A* 3ti0_A* 4dse_A* 4dsf_A* 4ds4_A* 4dqp_A* 4dqi_A* 4ds5_A* 4e0d_A* 4dqr_A* 4dqq_A* 3tan_A* 3tap_A* 3taq_A* 3tar_A* 4dqs_A* 3hp6_A* ...
Probab=28.02 E-value=25 Score=31.53 Aligned_cols=29 Identities=7% Similarity=0.069 Sum_probs=23.1
Q ss_pred HHHHHHHHHhcCCCCCcccccCCCCeEEEeechhhhhhhhc
Q 025404 204 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR 244 (253)
Q Consensus 204 v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~ 244 (253)
+...|..++. +.+...|+||+.+|+.+|.
T Consensus 69 ~l~~Lk~lLe------------d~~i~KV~hn~K~Dl~vL~ 97 (592)
T 3pv8_A 69 ADPQFVAWLG------------DETKKKSMFDSKRAAVALK 97 (592)
T ss_dssp TCHHHHHHHT------------CTTSEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHh------------CCCCeEEEechHHHHHHHH
Confidence 4567888883 2556899999999999984
No 484
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=27.63 E-value=55 Score=21.81 Aligned_cols=20 Identities=15% Similarity=0.131 Sum_probs=11.3
Q ss_pred cccccCChHHHHHHHHHccCC
Q 025404 84 CMNIFDSPSSLIKHKEACSLS 104 (253)
Q Consensus 84 C~k~f~~~~~l~~H~~~h~~~ 104 (253)
|+.... ...|..|...+..+
T Consensus 96 C~~~~~-~~~~~~H~~~C~~~ 115 (116)
T 1rmd_A 96 CNEEVS-LEKYNHHVSSHKES 115 (116)
T ss_dssp CCCEEE-HHHHHHHHHTSCCC
T ss_pred Ccchhh-HhHHHHHHHHhhcc
Confidence 544433 55677777666543
No 485
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=26.87 E-value=43 Score=21.50 Aligned_cols=11 Identities=27% Similarity=0.848 Sum_probs=5.9
Q ss_pred ccccccccccC
Q 025404 45 KCAVCQKLSKS 55 (253)
Q Consensus 45 ~C~~C~~~f~~ 55 (253)
.|.+|++.|-.
T Consensus 31 pCRvC~RvfH~ 41 (89)
T 1wil_A 31 PCRVCTRVFHD 41 (89)
T ss_dssp SCSSSSSCCCH
T ss_pred ccccccccccH
Confidence 55555555543
No 486
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=26.53 E-value=46 Score=22.82 Aligned_cols=16 Identities=13% Similarity=0.177 Sum_probs=12.1
Q ss_pred ccccccccCChHHHHH
Q 025404 81 CNLCMNIFDSPSSLIK 96 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~ 96 (253)
|+.||..+........
T Consensus 39 C~~CGE~~~d~e~~~~ 54 (133)
T 3o9x_A 39 CVHCEESIMNKEESDA 54 (133)
T ss_dssp ESSSSCEECCHHHHHH
T ss_pred CCCCCCEeecHHHHHH
Confidence 8899988888765543
No 487
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=26.53 E-value=12 Score=26.66 Aligned_cols=12 Identities=33% Similarity=0.382 Sum_probs=8.7
Q ss_pred ccccccccccCH
Q 025404 45 KCAVCQKLSKSF 56 (253)
Q Consensus 45 ~C~~C~~~f~~~ 56 (253)
.|..||+.|...
T Consensus 72 ~C~~CG~~~~~~ 83 (139)
T 3a43_A 72 KCRNCNYEWKLK 83 (139)
T ss_dssp EETTTCCEEEGG
T ss_pred ECCCCCCEEecc
Confidence 788888777653
No 488
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=26.52 E-value=15 Score=22.71 Aligned_cols=10 Identities=20% Similarity=0.776 Sum_probs=6.8
Q ss_pred cccccccccc
Q 025404 45 KCAVCQKLSK 54 (253)
Q Consensus 45 ~C~~C~~~f~ 54 (253)
.|..||..+.
T Consensus 9 ~C~vCGyiYd 18 (70)
T 1dx8_A 9 ECEACGYIYE 18 (70)
T ss_dssp EETTTCCEEC
T ss_pred EeCCCCEEEc
Confidence 6777776654
No 489
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=25.95 E-value=12 Score=28.20 Aligned_cols=20 Identities=15% Similarity=0.426 Sum_probs=9.9
Q ss_pred CCCCcCCccccc----cccccccc
Q 025404 67 LSKAHCSGIFSD----RGCNLCMN 86 (253)
Q Consensus 67 ~~C~~C~~~f~~----~~C~~C~k 86 (253)
|.|..||..+.. ..|+.||.
T Consensus 156 ~~C~~CG~~~~g~~~p~~CP~C~~ 179 (191)
T 1lko_A 156 WRCRNCGYVHEGTGAPELCPACAH 179 (191)
T ss_dssp EEETTTCCEEEEEECCSBCTTTCC
T ss_pred EEECCCCCEeeCCCCCCCCCCCcC
Confidence 445555555431 13666653
No 490
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.86 E-value=23 Score=21.36 Aligned_cols=16 Identities=25% Similarity=0.555 Sum_probs=12.5
Q ss_pred CCcccccccccccCCH
Q 025404 12 TARHKCVACYKQFKRK 27 (253)
Q Consensus 12 ~k~~~C~~C~k~f~~~ 27 (253)
--||.|..|+..|-..
T Consensus 25 ll~f~C~~C~~~FC~~ 40 (63)
T 1x4v_A 25 MMKLTCERCSRNFCIK 40 (63)
T ss_dssp SSCCBCSSSCCBCCHH
T ss_pred ccceECCCCCcccCcc
Confidence 3578999999988754
No 491
>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2ybb_Q* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* ...
Probab=24.67 E-value=20 Score=23.81 Aligned_cols=14 Identities=21% Similarity=0.717 Sum_probs=10.7
Q ss_pred CCcccccccccccC
Q 025404 12 TARHKCVACYKQFK 25 (253)
Q Consensus 12 ~k~~~C~~C~k~f~ 25 (253)
.+|..|+.||..|.
T Consensus 77 g~~~RC~eCG~~fk 90 (98)
T 1v54_F 77 GEAQRCPSCGTHYK 90 (98)
T ss_dssp SSCEECTTTCCEEE
T ss_pred CCceECCCCCeEEE
Confidence 46788888887775
No 492
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=24.31 E-value=12 Score=25.60 Aligned_cols=14 Identities=14% Similarity=0.565 Sum_probs=9.3
Q ss_pred CcccccccccccCC
Q 025404 13 ARHKCVACYKQFKR 26 (253)
Q Consensus 13 k~~~C~~C~k~f~~ 26 (253)
..+.|+.|-..|..
T Consensus 6 ~~~~C~IC~~~~~~ 19 (133)
T 4ap4_A 6 GTVSCPICMDGYSE 19 (133)
T ss_dssp CSCBCTTTCCBHHH
T ss_pred CCCCCcccChhhhC
Confidence 45678888766543
No 493
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=24.22 E-value=12 Score=24.20 Aligned_cols=10 Identities=20% Similarity=0.703 Sum_probs=7.2
Q ss_pred cccccccccc
Q 025404 45 KCAVCQKLSK 54 (253)
Q Consensus 45 ~C~~C~~~f~ 54 (253)
.|..||..+-
T Consensus 37 ~C~vCGyvYD 46 (87)
T 1s24_A 37 ICITCGHIYD 46 (87)
T ss_dssp EETTTTEEEE
T ss_pred ECCCCCeEec
Confidence 7888876664
No 494
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=23.75 E-value=44 Score=23.05 Aligned_cols=23 Identities=22% Similarity=0.434 Sum_probs=19.4
Q ss_pred ccccccccCChHHHHHHHHHccC
Q 025404 81 CNLCMNIFDSPSSLIKHKEACSL 103 (253)
Q Consensus 81 C~~C~k~f~~~~~l~~H~~~h~~ 103 (253)
|-.|.+.|.+...+-.|++..++
T Consensus 18 CLFCd~~~~s~~~~l~H~k~~H~ 40 (121)
T 1wir_A 18 CLFCDRLFASAEETFSHCKLEHQ 40 (121)
T ss_dssp CSSSCCEESSHHHHHHHHHHSSC
T ss_pred EecCCCcccCHHHHHHHHHHhcC
Confidence 77888889999999999987664
No 495
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=23.58 E-value=16 Score=23.28 Aligned_cols=18 Identities=28% Similarity=0.519 Sum_probs=8.8
Q ss_pred CCCcCCccccccc-ccccc
Q 025404 68 SKAHCSGIFSDRG-CNLCM 85 (253)
Q Consensus 68 ~C~~C~~~f~~~~-C~~C~ 85 (253)
.|..|++.|.... |+.||
T Consensus 20 ~C~~C~~~~~~~afCPeCg 38 (81)
T 2jrp_A 20 HCETCAKDFSLQALCPDCR 38 (81)
T ss_dssp ECTTTCCEEEEEEECSSSC
T ss_pred ECccccccCCCcccCcchh
Confidence 3555555554332 55554
No 496
>1yt3_A Ribonuclease D, RNAse D; exoribonuclease, exonuclease, hydrolase, tRNA processing, hydrolase,translation; 1.60A {Escherichia coli} SCOP: a.60.8.3 a.60.8.3 c.55.3.5
Probab=23.37 E-value=54 Score=27.30 Aligned_cols=27 Identities=19% Similarity=0.180 Sum_probs=21.2
Q ss_pred HHHHHHHhcCCCCCcccccCCCCeEEEeechhhhhhhhc
Q 025404 206 DKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR 244 (253)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~~D~~~l~ 244 (253)
..|..++.+ .+.+.||||+.+|+.+|.
T Consensus 64 ~~L~~ll~d------------~~i~Kv~h~~k~Dl~~L~ 90 (375)
T 1yt3_A 64 SPLKAILRD------------PSITKFLHAGSEDLEVFL 90 (375)
T ss_dssp HHHHHHHHC------------TTSEEEESSCHHHHHHHH
T ss_pred HHHHHHHcC------------CCceEEEeeHHHHHHHHH
Confidence 457778843 445789999999999995
No 497
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=23.02 E-value=9.6 Score=22.76 Aligned_cols=24 Identities=29% Similarity=0.409 Sum_probs=12.6
Q ss_pred ccccccccccCHHHHhhhhCCCCCCCcCCccc
Q 025404 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (253)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~~~f 76 (253)
.|-.|.+.|...+ -|.|+.|...|
T Consensus 17 ~C~~C~~~~~~~~--------~y~C~~C~~~F 40 (59)
T 1z60_A 17 FCYGCQGELKDQH--------VYVCAVCQNVF 40 (59)
T ss_dssp EETTTTEECTTSE--------EECCTTTTCCB
T ss_pred cccccCcccCCCc--------cEECCccCcCc
Confidence 4666666664211 25565555555
No 498
>4gmj_B CCR4-NOT transcription complex subunit 7; mRNA decay, deadenylase, RNA bindin; HET: GOL; 2.70A {Homo sapiens}
Probab=22.91 E-value=1.8e+02 Score=23.19 Aligned_cols=15 Identities=40% Similarity=0.271 Sum_probs=12.3
Q ss_pred CCceeeeecccccCC
Q 025404 134 GPKAVAMDCEMVGGG 148 (253)
Q Consensus 134 ~~~~~~~dcE~~g~~ 148 (253)
...++++|+|.+|..
T Consensus 33 ~~~fVAiDtEFpGvv 47 (285)
T 4gmj_B 33 KYNYVAMDTEFPGVV 47 (285)
T ss_dssp HCCEEEEEEECCCCC
T ss_pred cCCEEEEEEEecCcc
Confidence 456899999999964
No 499
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=20.89 E-value=76 Score=24.09 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=22.2
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCcccccCCCCeEEEeechh
Q 025404 198 AMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLE 237 (253)
Q Consensus 198 ~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~lv~h~~~ 237 (253)
..++++..+.|.+++.... .....+||||+..
T Consensus 51 ~~~~~~~a~dl~~~l~~l~--------~~~~~~lvGhSmG 82 (257)
T 3c6x_A 51 IGSFDEYSEPLLTFLEALP--------PGEKVILVGESCG 82 (257)
T ss_dssp CCSHHHHTHHHHHHHHTSC--------TTCCEEEEEEETH
T ss_pred ccCHHHHHHHHHHHHHhcc--------ccCCeEEEEECcc
Confidence 4688998899988883210 1145799999865
No 500
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=20.80 E-value=1e+02 Score=23.56 Aligned_cols=40 Identities=23% Similarity=0.385 Sum_probs=0.0
Q ss_pred ccCCHHhhcCCCCHHHHHHHHHHHHhcCC-CCCcccccCCCCeEEEeech
Q 025404 188 TGLTEEDIKNAMPLKEVKDKILEILNNGE-STGRLMLDDGKARLLVGHGL 236 (253)
Q Consensus 188 ~Git~~~l~~~~~~~~v~~~l~~~~~~~~-~~~~~~~~~~~~~~lv~h~~ 236 (253)
+|-++.......++++..+.|.+++.... . ...+||||+.
T Consensus 42 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~---------~~~~lvGhSm 82 (273)
T 1xkl_A 42 SGTDLRKIEELRTLYDYTLPLMELMESLSAD---------EKVILVGHSL 82 (273)
T ss_dssp STTCCCCGGGCCSHHHHHHHHHHHHHTSCSS---------SCEEEEEETT
T ss_pred CCCCccCcccccCHHHHHHHHHHHHHHhccC---------CCEEEEecCH
Done!