Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>025405
MASTSASRHDAVTGRIRNAATTLYNDNNTVIGEIRRALGMIKEIAVDLEKDNQSQMVKEL
EDATIQLMEAFGDCTHHSAAIQSVGNTYQPGTELTDFKKLLVDEDAKSRAASSSVPPNDP
LHKFREAVWNVHHAGELMPGEEQEDIVMTSTQSNILNISCPLSGKPITELAEPVRRYQIL
QIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFMQVLEYDGDIYLL
GLASGTSLCPLYE

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025405
        (253 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2083641 - symbol:HPY2 "HIGH PLOIDY2" species:3...   547  8.0e-53   1


>TAIR|locus:2083641 [details] [associations]
            symbol:HPY2 "HIGH PLOIDY2" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0019789 "SUMO
            ligase activity" evidence=IDA] [GO:0032876 "negative regulation of
            DNA endoreduplication" evidence=IMP] [GO:0048509 "regulation of
            meristem development" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IMP] [GO:0010082 "regulation of root
            meristem growth" evidence=IMP] [GO:0016925 "protein sumoylation"
            evidence=IDA] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=IMP] [GO:0080038 "positive regulation of cytokinin
            mediated signaling pathway" evidence=IMP] [GO:0006974 "response to
            DNA damage stimulus" evidence=IMP] [GO:0060250 "germ-line stem-cell
            niche homeostasis" evidence=IMP] InterPro:IPR026846 PROSITE:PS51044
            UniPathway:UPA00886 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0045931 GO:GO:0008284
            GO:GO:0007049 GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0000724 GO:GO:0032876 GO:GO:0016925 GO:GO:0045842
            GO:GO:0010082 GO:GO:0019789 GO:GO:0030915 GO:GO:0034184
            EMBL:AP001299 EMBL:BT026417 EMBL:AK117616 IPI:IPI00536812
            RefSeq:NP_188133.2 UniGene:At.39098 ProteinModelPortal:Q8GYH7
            SMR:Q8GYH7 PaxDb:Q8GYH7 PRIDE:Q8GYH7 EnsemblPlants:AT3G15150.1
            GeneID:820746 KEGG:ath:AT3G15150 TAIR:At3g15150 eggNOG:NOG119258
            HOGENOM:HOG000030304 InParanoid:Q9LIM0 OMA:QPMPGEE PhylomeDB:Q8GYH7
            ProtClustDB:CLSN2690946 Genevestigator:Q8GYH7 GO:GO:0080038
            PANTHER:PTHR21330 Uniprot:Q8GYH7
        Length = 249

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 108/192 (56%), Positives = 140/192 (72%)

Query:     1 MASTSASRHDAVTGRIRNAATTLYNDNNTVIGEIRRALGMIKEIAVDLEKDNQSQMVKEL 60
             MAS S+S  D V GRI+NA+  L +DN++ + +IR+A+ M+K IAV LEK+NQ+  VK+L
Sbjct:     1 MASASSS--DGVAGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDL 58

Query:    61 EDATIQLMEAFGDCTHHSAAIQSVGNTYQPGTELTDFKKLLVDEDAKSRAASSSVPPNDP 120
             E++  +L++   DC H S AIQSV N YQP  +LTDFKKLL DE  K +A  SSVP ND 
Sbjct:    59 ENSVAELLDLHSDCNHRSTAIQSVANRYQPVEQLTDFKKLLDDEFTKLKATPSSVPQNDH 118

Query:   121 L-HKFREAVWNVHHAGELMPGEEQEDIVMTSTQSNILNISCPLSGKPITELAEPVRRYQI 179
             L  +FREAVWNVHHAGE MPG++ EDIVMTSTQ  +LN++CPLSGKP+TELA+PVR    
Sbjct:   119 LMRQFREAVWNVHHAGEPMPGDDDEDIVMTSTQCPLLNMTCPLSGKPVTELADPVRSMDC 178

Query:   180 LQIYPRFSFLPF 191
               +Y +   L +
Sbjct:   179 RHVYEKSVILHY 190


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      253       253   0.00083  114 3  11 22  0.43    33
                                                     32  0.47    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  208 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.33u 0.16s 23.49t   Elapsed:  00:00:01
  Total cpu time:  23.33u 0.16s 23.49t   Elapsed:  00:00:01
  Start:  Fri May 10 07:55:11 2013   End:  Fri May 10 07:55:12 2013

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