Query 025405
Match_columns 253
No_of_seqs 131 out of 170
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 09:37:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025405.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025405hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3htk_C E3 SUMO-protein ligase 100.0 7.3E-29 2.5E-33 223.7 15.9 171 53-230 59-250 (267)
2 2yu4_A E3 SUMO-protein ligase 99.6 3.1E-16 1.1E-20 120.2 4.9 74 154-230 4-81 (94)
3 2kr4_A Ubiquitin conjugation f 99.3 1.1E-12 3.6E-17 98.9 4.5 64 157-229 14-77 (85)
4 3i2d_A E3 SUMO-protein ligase 99.1 1.4E-11 4.8E-16 115.7 3.7 78 141-227 236-315 (371)
5 2kre_A Ubiquitin conjugation f 99.1 4.3E-11 1.5E-15 92.9 5.2 65 157-230 29-93 (100)
6 2bay_A PRE-mRNA splicing facto 99.1 2.3E-11 7.9E-16 86.6 1.8 55 156-218 2-56 (61)
7 1wgm_A Ubiquitin conjugation f 99.1 1.3E-10 4.3E-15 89.9 6.0 66 157-231 22-88 (98)
8 2f42_A STIP1 homology and U-bo 98.9 3.4E-10 1.2E-14 96.9 3.9 65 157-229 106-170 (179)
9 4fo9_A E3 SUMO-protein ligase 98.9 3.4E-10 1.2E-14 106.0 3.5 78 141-227 202-281 (360)
10 2c2l_A CHIP, carboxy terminus 98.9 6E-10 2E-14 97.7 3.8 62 157-226 208-269 (281)
11 1t1h_A Gspef-atpub14, armadill 98.9 1.1E-09 3.8E-14 79.7 4.1 65 157-229 8-72 (78)
12 3ztg_A E3 ubiquitin-protein li 98.5 7.5E-08 2.6E-12 71.9 4.6 68 157-230 13-81 (92)
13 2y43_A E3 ubiquitin-protein li 98.4 2.6E-07 8.8E-12 70.1 4.6 69 157-233 22-90 (99)
14 1jm7_A BRCA1, breast cancer ty 98.3 8.6E-07 3E-11 68.0 5.1 62 157-224 21-82 (112)
15 3lrq_A E3 ubiquitin-protein li 98.2 7.3E-07 2.5E-11 68.2 4.1 69 157-232 22-90 (100)
16 1jm7_B BARD1, BRCA1-associated 98.2 1.4E-06 4.9E-11 68.1 5.8 67 157-233 22-88 (117)
17 2csy_A Zinc finger protein 183 98.2 1.1E-06 3.7E-11 64.2 4.1 61 157-227 15-75 (81)
18 2egp_A Tripartite motif-contai 98.2 5.4E-07 1.8E-11 65.0 2.1 61 157-223 12-76 (79)
19 1z6u_A NP95-like ring finger p 98.1 2.3E-06 7.8E-11 70.4 5.5 63 157-227 78-141 (150)
20 2ckl_B Ubiquitin ligase protei 98.1 1.3E-06 4.3E-11 72.2 3.9 66 156-228 53-119 (165)
21 3hct_A TNF receptor-associated 98.1 8.9E-07 3E-11 69.4 2.2 67 157-231 18-84 (118)
22 2ecy_A TNF receptor-associated 98.1 2.6E-06 8.7E-11 59.9 4.2 51 157-215 15-65 (66)
23 2ecw_A Tripartite motif-contai 98.1 1.2E-06 4.2E-11 63.5 2.4 61 157-223 19-82 (85)
24 2ckl_A Polycomb group ring fin 98.1 2.7E-06 9.4E-11 65.4 4.5 61 157-225 15-79 (108)
25 3fl2_A E3 ubiquitin-protein li 98.1 3.7E-06 1.3E-10 66.2 5.3 62 157-226 52-114 (124)
26 2ecv_A Tripartite motif-contai 98.1 2.6E-06 8.9E-11 61.7 3.7 61 157-223 19-82 (85)
27 2ysl_A Tripartite motif-contai 98.0 3.5E-06 1.2E-10 59.9 3.8 53 157-215 20-72 (73)
28 2yur_A Retinoblastoma-binding 98.0 3.8E-06 1.3E-10 60.6 4.0 47 157-209 15-61 (74)
29 2djb_A Polycomb group ring fin 98.0 3.7E-06 1.3E-10 60.1 3.8 53 157-217 15-67 (72)
30 1g25_A CDK-activating kinase a 97.9 5.1E-06 1.7E-10 58.1 3.4 55 157-217 3-60 (65)
31 3hcs_A TNF receptor-associated 97.9 2.8E-06 9.5E-11 70.3 2.2 69 156-232 17-85 (170)
32 3knv_A TNF receptor-associated 97.9 3.4E-06 1.2E-10 68.8 1.5 67 157-231 31-106 (141)
33 1rmd_A RAG1; V(D)J recombinati 97.8 7.8E-06 2.7E-10 63.5 3.2 66 157-230 23-89 (116)
34 3l11_A E3 ubiquitin-protein li 97.7 2.3E-05 7.7E-10 60.8 4.0 62 157-226 15-83 (115)
35 2ct2_A Tripartite motif protei 97.7 1.4E-05 4.7E-10 58.5 2.2 53 157-215 15-71 (88)
36 3ng2_A RNF4, snurf, ring finge 97.6 1.5E-05 5E-10 56.2 1.5 53 157-217 10-68 (71)
37 2ysj_A Tripartite motif-contai 97.6 3.6E-05 1.2E-09 53.3 3.5 43 157-203 20-62 (63)
38 2xeu_A Ring finger protein 4; 97.6 1.3E-05 4.3E-10 55.2 0.6 53 157-217 3-61 (64)
39 4ayc_A E3 ubiquitin-protein li 97.5 3.7E-05 1.3E-09 61.8 3.0 47 157-212 53-99 (138)
40 2d8t_A Dactylidin, ring finger 97.5 2.7E-05 9.4E-10 55.3 2.0 51 157-216 15-65 (71)
41 1wim_A KIAA0161 protein; ring 97.5 3.1E-05 1.1E-09 58.2 2.1 57 157-216 5-70 (94)
42 2ecj_A Tripartite motif-contai 97.5 0.00011 3.6E-09 49.6 4.2 43 157-203 15-57 (58)
43 2ect_A Ring finger protein 126 97.4 0.00012 4.1E-09 52.6 3.8 55 157-219 15-71 (78)
44 3m62_A Ubiquitin conjugation f 97.4 0.00011 3.6E-09 76.4 4.2 62 157-227 891-953 (968)
45 1chc_A Equine herpes virus-1 r 97.3 6.7E-05 2.3E-09 52.4 1.8 47 157-211 5-51 (68)
46 4ap4_A E3 ubiquitin ligase RNF 97.3 6.3E-05 2.2E-09 58.5 1.2 53 157-217 7-65 (133)
47 1iym_A EL5; ring-H2 finger, ub 97.1 0.00042 1.4E-08 46.3 4.1 50 157-211 5-54 (55)
48 2ea6_A Ring finger protein 4; 97.1 0.00016 5.5E-09 50.2 1.4 48 157-212 15-68 (69)
49 2ecm_A Ring finger and CHY zin 97.0 0.00051 1.7E-08 45.8 3.8 49 157-210 5-53 (55)
50 1x4j_A Ring finger protein 38; 96.5 0.00081 2.8E-08 47.9 1.7 48 157-212 23-72 (75)
51 2ep4_A Ring finger protein 24; 96.5 0.0015 5E-08 46.3 2.7 47 157-211 15-63 (74)
52 1bor_A Transcription factor PM 96.4 0.0021 7.1E-08 43.7 3.2 45 157-213 6-50 (56)
53 2kiz_A E3 ubiquitin-protein li 96.4 0.002 6.7E-08 45.0 3.0 50 157-212 14-63 (69)
54 2ecn_A Ring finger protein 141 96.4 0.0014 4.9E-08 45.8 2.2 48 157-214 15-62 (70)
55 2ecl_A Ring-box protein 2; RNF 96.3 0.0022 7.6E-08 46.8 3.0 38 173-215 42-79 (81)
56 4ap4_A E3 ubiquitin ligase RNF 96.3 0.00077 2.6E-08 52.2 0.4 53 157-217 72-130 (133)
57 1v87_A Deltex protein 2; ring- 96.2 0.0028 9.6E-08 48.5 3.0 50 157-211 25-93 (114)
58 1e4u_A Transcriptional repress 96.1 0.0073 2.5E-07 44.2 4.9 55 157-216 11-66 (78)
59 2l0b_A E3 ubiquitin-protein li 96.1 0.0025 8.6E-08 47.4 2.3 47 157-211 40-88 (91)
60 2y1n_A E3 ubiquitin-protein li 95.4 0.0055 1.9E-07 57.9 2.3 51 157-215 332-382 (389)
61 3dpl_R Ring-box protein 1; ubi 94.7 0.02 6.9E-07 44.3 3.3 34 174-212 68-101 (106)
62 4ic3_A E3 ubiquitin-protein li 93.4 0.041 1.4E-06 39.2 2.5 42 157-211 24-66 (74)
63 2ct0_A Non-SMC element 1 homol 92.5 0.13 4.6E-06 37.4 4.2 48 158-211 16-63 (74)
64 2ecg_A Baculoviral IAP repeat- 92.4 0.088 3E-06 37.4 3.0 43 157-212 25-68 (75)
65 1yc5_A NAD-dependent deacetyla 91.6 0.22 7.4E-06 43.6 5.2 65 174-248 122-191 (246)
66 4a0k_B E3 ubiquitin-protein li 90.9 0.049 1.7E-06 43.1 0.3 35 173-212 78-112 (117)
67 2gmg_A Hypothetical protein PF 90.3 0.13 4.5E-06 40.1 2.2 29 170-208 64-92 (105)
68 3okq_A BUD site selection prot 89.8 3.1 0.00011 33.9 10.2 83 16-107 12-94 (141)
69 1ma3_A SIR2-AF2, transcription 89.8 0.39 1.3E-05 42.1 5.2 65 174-248 124-194 (253)
70 3t6p_A Baculoviral IAP repeat- 87.8 0.24 8.1E-06 45.8 2.5 42 157-211 295-337 (345)
71 3glr_A NAD-dependent deacetyla 86.7 0.37 1.3E-05 43.5 3.0 64 174-248 140-208 (285)
72 1q1a_A HST2 protein; ternary c 86.0 1.2 4E-05 39.8 6.0 38 174-213 137-176 (289)
73 2vje_B MDM4 protein; proto-onc 84.7 0.48 1.7E-05 32.6 2.2 47 157-211 7-55 (63)
74 1j8f_A SIRT2, sirtuin 2, isofo 84.3 1.6 5.5E-05 39.7 6.2 65 174-248 160-231 (323)
75 2d8s_A Cellular modulator of i 84.0 0.78 2.7E-05 33.4 3.2 50 158-212 16-70 (80)
76 1q14_A HST2 protein; histone d 84.0 1.5 5.2E-05 40.7 5.9 51 174-226 145-202 (361)
77 2vje_A E3 ubiquitin-protein li 83.8 0.61 2.1E-05 32.1 2.4 47 157-211 8-56 (64)
78 1vd4_A Transcription initiatio 83.5 0.45 1.5E-05 31.8 1.6 40 171-212 12-51 (62)
79 3k1l_B Fancl; UBC, ring, RWD, 82.9 0.75 2.6E-05 43.1 3.3 54 157-212 308-373 (381)
80 3u31_A SIR2A, transcriptional 82.7 1.1 3.6E-05 40.5 4.2 64 174-248 155-227 (290)
81 2epq_A POZ-, at HOOK-, and zin 82.5 1 3.6E-05 27.4 3.0 35 171-205 8-45 (45)
82 2yho_A E3 ubiquitin-protein li 81.9 0.71 2.4E-05 33.3 2.2 43 157-212 18-61 (79)
83 1m2k_A Silent information regu 80.5 1.6 5.4E-05 38.1 4.4 62 174-248 122-188 (249)
84 2lcq_A Putative toxin VAPC6; P 79.9 0.46 1.6E-05 38.8 0.7 27 174-211 133-159 (165)
85 1lko_A Rubrerythrin all-iron(I 79.4 0.53 1.8E-05 39.7 0.9 26 174-208 156-181 (191)
86 4iao_A NAD-dependent histone d 77.0 3 0.0001 40.5 5.4 29 174-203 300-328 (492)
87 2j7j_A Transcription factor II 76.4 1.3 4.3E-05 30.2 2.0 38 173-210 1-43 (85)
88 3nw0_A Non-structural maintena 75.2 2.3 7.8E-05 37.1 3.8 47 159-211 182-228 (238)
89 4ayb_P DNA-directed RNA polyme 74.3 0.87 3E-05 30.6 0.7 27 174-205 4-30 (48)
90 1yuz_A Nigerythrin; rubrythrin 74.1 1.2 4.1E-05 38.0 1.7 25 174-208 172-196 (202)
91 2hjh_A NAD-dependent histone d 74.0 2.8 9.5E-05 38.6 4.2 29 174-203 162-190 (354)
92 2d9k_A FLN29 gene product; zin 72.7 1 3.6E-05 31.6 0.8 44 171-216 15-59 (75)
93 2kpi_A Uncharacterized protein 71.9 1.4 4.8E-05 30.3 1.3 28 157-184 10-39 (56)
94 2ea5_A Cell growth regulator w 70.3 5.2 0.00018 27.8 4.0 42 157-211 15-57 (68)
95 4gzn_C ZFP-57, zinc finger pro 69.1 2.5 8.6E-05 28.7 2.1 49 171-226 2-53 (60)
96 3pwf_A Rubrerythrin; non heme 67.8 2.2 7.4E-05 35.5 1.8 25 174-208 139-163 (170)
97 1s24_A Rubredoxin 2; electron 66.9 1.9 6.4E-05 32.5 1.1 32 174-208 36-78 (87)
98 3vk6_A E3 ubiquitin-protein li 66.4 3.1 0.00011 32.1 2.3 60 159-221 3-83 (101)
99 2epr_A POZ-, at HOOK-, and zin 66.3 5 0.00017 24.6 3.0 33 171-203 10-45 (48)
100 2lce_A B-cell lymphoma 6 prote 66.2 6.5 0.00022 26.3 3.8 49 171-226 15-66 (74)
101 2eps_A POZ-, at HOOK-, and zin 66.2 5.9 0.0002 25.1 3.4 39 171-211 10-52 (54)
102 1e8j_A Rubredoxin; iron-sulfur 66.1 3.3 0.00011 28.0 2.2 35 174-208 4-46 (52)
103 2ctd_A Zinc finger protein 512 65.1 4.5 0.00015 29.4 3.0 47 171-224 32-81 (96)
104 6rxn_A Rubredoxin; electron tr 65.0 4 0.00014 27.0 2.4 34 174-208 5-40 (46)
105 3uk3_C Zinc finger protein 217 63.9 4.2 0.00014 25.5 2.3 39 171-211 2-43 (57)
106 2gqj_A Zinc finger protein KIA 63.8 2.6 8.8E-05 30.4 1.4 51 171-228 22-77 (98)
107 2jny_A Uncharacterized BCR; st 63.5 2.5 8.5E-05 30.2 1.2 36 157-192 10-48 (67)
108 2kvh_A Zinc finger and BTB dom 63.3 3.4 0.00012 21.8 1.5 17 172-188 2-18 (27)
109 2d9h_A Zinc finger protein 692 63.0 4.3 0.00015 27.4 2.4 51 171-228 5-61 (78)
110 2drp_A Protein (tramtrack DNA- 62.8 3.4 0.00012 26.9 1.8 50 171-227 8-62 (66)
111 2enf_A Zinc finger protein 347 62.4 7.3 0.00025 23.4 3.2 33 171-203 10-45 (46)
112 2yti_A Zinc finger protein 347 61.8 7.4 0.00025 23.3 3.1 33 171-203 10-45 (46)
113 2kvf_A Zinc finger and BTB dom 61.5 3.7 0.00013 21.7 1.5 17 172-188 2-18 (28)
114 2em4_A Zinc finger protein 28 61.4 6.2 0.00021 23.8 2.7 33 171-203 10-45 (46)
115 3knv_A TNF receptor-associated 61.4 0.74 2.5E-05 36.8 -2.2 58 157-217 66-123 (141)
116 2kvg_A Zinc finger and BTB dom 61.3 3.1 0.00011 22.1 1.1 17 172-188 2-18 (27)
117 2en9_A Zinc finger protein 28 61.1 8.1 0.00028 23.2 3.2 33 171-203 10-45 (46)
118 2m0d_A Zinc finger and BTB dom 61.0 3.7 0.00013 21.7 1.4 22 172-193 2-24 (30)
119 1dvp_A HRS, hepatocyte growth 60.8 74 0.0025 26.6 14.5 70 118-187 119-191 (220)
120 2jr6_A UPF0434 protein NMA0874 60.5 3 0.0001 29.7 1.2 36 157-192 8-46 (68)
121 2hf1_A Tetraacyldisaccharide-1 60.4 3 0.0001 29.7 1.2 35 158-192 9-46 (68)
122 2eq2_A Zinc finger protein 347 60.2 9.2 0.00032 22.9 3.4 33 171-203 10-45 (46)
123 2v3b_B Rubredoxin 2, rubredoxi 60.1 3.5 0.00012 28.2 1.4 35 174-208 4-46 (55)
124 2ep1_A Zinc finger protein 484 60.1 9.3 0.00032 22.8 3.4 33 171-203 10-45 (46)
125 1pft_A TFIIB, PFTFIIBN; N-term 60.0 3.5 0.00012 27.0 1.4 33 157-189 5-40 (50)
126 2eor_A Zinc finger protein 224 59.8 6.7 0.00023 23.5 2.7 33 171-203 10-45 (46)
127 1x5w_A Zinc finger protein 64, 59.8 4 0.00014 27.0 1.7 50 171-227 7-59 (70)
128 2pk7_A Uncharacterized protein 59.7 3.2 0.00011 29.7 1.2 36 157-192 8-46 (69)
129 2ytp_A Zinc finger protein 484 59.6 7.4 0.00025 23.4 2.8 33 171-203 10-45 (46)
130 2emg_A Zinc finger protein 484 59.4 9.2 0.00032 22.9 3.3 33 171-203 10-45 (46)
131 2yth_A Zinc finger protein 224 59.0 10 0.00034 22.8 3.4 33 171-203 10-45 (46)
132 2eon_A ZFP-95, zinc finger pro 58.9 9.4 0.00032 23.0 3.3 33 171-203 10-45 (46)
133 2emj_A Zinc finger protein 28 58.9 7.9 0.00027 23.3 2.9 33 171-203 10-45 (46)
134 2kdx_A HYPA, hydrogenase/ureas 58.6 4.1 0.00014 31.5 1.7 23 174-205 74-97 (119)
135 2epu_A Zinc finger protein 32; 58.1 6.7 0.00023 23.5 2.4 33 171-203 10-45 (45)
136 2lv2_A Insulinoma-associated p 58.0 9.8 0.00033 27.5 3.7 50 171-227 26-78 (85)
137 1dx8_A Rubredoxin; electron tr 57.8 4.2 0.00014 29.2 1.6 36 173-208 7-50 (70)
138 2yt9_A Zinc finger-containing 57.7 10 0.00034 26.2 3.6 51 171-228 33-88 (95)
139 2adr_A ADR1; transcription reg 57.3 7.3 0.00025 24.7 2.6 48 172-226 1-51 (60)
140 2kkx_A Uncharacterized protein 57.0 5.6 0.00019 30.7 2.2 36 157-193 27-65 (102)
141 3hct_A TNF receptor-associated 56.9 4.9 0.00017 30.4 2.0 47 158-216 54-100 (118)
142 2eq1_A Zinc finger protein 347 56.7 10 0.00035 22.7 3.1 33 171-203 10-45 (46)
143 2ytf_A Zinc finger protein 268 56.4 8.5 0.00029 23.0 2.7 33 171-203 10-45 (46)
144 1x6e_A Zinc finger protein 24; 56.2 13 0.00045 24.6 3.9 50 171-227 12-64 (72)
145 1ard_A Yeast transcription fac 55.9 6.3 0.00022 20.6 1.8 17 173-189 2-18 (29)
146 1p7a_A BF3, BKLF, kruppel-like 55.7 6 0.00021 22.4 1.8 20 171-190 9-28 (37)
147 2eoh_A Zinc finger protein 28 55.7 10 0.00035 22.7 3.0 33 171-203 10-45 (46)
148 2yts_A Zinc finger protein 484 55.5 10 0.00035 22.6 3.0 33 171-203 10-45 (46)
149 2eoz_A Zinc finger protein 473 55.5 8.4 0.00029 23.1 2.6 33 171-203 10-45 (46)
150 2em3_A Zinc finger protein 28 54.8 10 0.00034 22.7 2.8 33 171-203 10-45 (46)
151 2em6_A Zinc finger protein 224 54.7 12 0.00041 22.4 3.2 33 171-203 10-45 (46)
152 1znf_A 31ST zinc finger from X 54.6 6.2 0.00021 20.4 1.6 16 173-188 1-16 (27)
153 2eod_A TNF receptor-associated 54.3 8.6 0.00029 25.2 2.7 39 171-210 8-47 (66)
154 2ee8_A Protein ODD-skipped-rel 54.2 24 0.00082 24.8 5.3 49 171-226 43-94 (106)
155 2epa_A Krueppel-like factor 10 54.2 6.3 0.00022 26.1 2.0 41 171-211 15-60 (72)
156 1rmd_A RAG1; V(D)J recombinati 54.0 2.8 9.7E-05 31.5 0.1 49 157-216 58-106 (116)
157 2yrm_A B-cell lymphoma 6 prote 54.0 12 0.00042 22.1 3.1 33 171-203 8-43 (43)
158 1ubd_C Protein (YY1 zinc finge 53.8 8.2 0.00028 28.2 2.7 38 172-209 61-103 (124)
159 2kn9_A Rubredoxin; metalloprot 53.7 4.3 0.00015 30.1 1.1 36 173-208 27-70 (81)
160 2js4_A UPF0434 protein BB2007; 53.6 4.4 0.00015 29.0 1.1 36 157-192 8-46 (70)
161 2ytn_A Zinc finger protein 347 53.6 13 0.00044 22.2 3.2 33 171-203 10-45 (46)
162 2cot_A Zinc finger protein 435 53.2 9.9 0.00034 25.5 2.9 49 171-226 16-67 (77)
163 2dlk_A Novel protein; ZF-C2H2 53.0 14 0.00047 24.6 3.6 52 171-227 5-62 (79)
164 2eow_A Zinc finger protein 347 52.8 11 0.00036 22.5 2.7 33 171-203 10-45 (46)
165 2emi_A Zinc finger protein 484 52.2 13 0.00044 22.2 3.0 33 171-203 10-45 (46)
166 2ghf_A ZHX1, zinc fingers and 52.0 5.1 0.00017 30.0 1.3 42 172-213 49-94 (102)
167 2elq_A Zinc finger protein 406 51.8 6.6 0.00023 22.1 1.5 23 171-193 7-30 (36)
168 2el5_A Zinc finger protein 268 51.7 13 0.00043 21.7 2.9 32 171-202 8-42 (42)
169 3k35_A NAD-dependent deacetyla 51.5 3.8 0.00013 37.5 0.5 68 174-248 139-217 (318)
170 2ema_A Zinc finger protein 347 51.4 13 0.00045 22.1 3.0 33 171-203 10-45 (46)
171 2elx_A Zinc finger protein 406 50.8 7 0.00024 21.6 1.5 19 171-189 5-23 (35)
172 1wjp_A Zinc finger protein 295 50.6 6.2 0.00021 28.3 1.5 48 172-226 41-90 (107)
173 2elv_A Zinc finger protein 406 50.5 7.1 0.00024 22.0 1.5 20 171-190 7-26 (36)
174 1bbo_A Human enhancer-binding 50.4 10 0.00035 23.6 2.5 37 173-211 1-40 (57)
175 2epx_A Zinc finger protein 28 50.3 15 0.00052 21.8 3.2 33 171-203 10-46 (47)
176 2yrj_A Zinc finger protein 473 50.3 13 0.00045 22.0 2.9 33 171-203 10-45 (46)
177 2wbt_A B-129; zinc finger; 2.7 50.0 16 0.00054 27.0 3.8 50 171-227 72-122 (129)
178 2eop_A Zinc finger protein 268 48.6 16 0.00056 21.6 3.1 33 171-203 10-45 (46)
179 1srk_A Zinc finger protein ZFP 48.3 7.8 0.00027 21.6 1.5 23 171-193 5-28 (35)
180 2eom_A ZFP-95, zinc finger pro 48.2 17 0.00058 21.7 3.1 33 171-203 10-45 (46)
181 1fv5_A First zinc finger of U- 48.2 7.5 0.00026 23.7 1.4 19 171-189 6-24 (36)
182 2m0e_A Zinc finger and BTB dom 48.1 9.5 0.00032 19.7 1.7 15 173-187 2-16 (29)
183 3pki_A NAD-dependent deacetyla 48.1 4.1 0.00014 37.9 0.2 18 174-191 139-156 (355)
184 1llm_C Chimera of ZIF23-GCN4; 48.0 9.6 0.00033 26.3 2.2 37 172-210 2-41 (88)
185 2epz_A Zinc finger protein 28 48.0 17 0.00057 21.6 3.1 33 171-203 10-45 (46)
186 1paa_A Yeast transcription fac 47.8 9.1 0.00031 20.2 1.6 19 173-191 2-21 (30)
187 2eq4_A Zinc finger protein 224 47.8 15 0.00051 21.8 2.8 33 171-203 10-45 (46)
188 2elr_A Zinc finger protein 406 47.7 10 0.00034 21.1 1.9 22 171-192 7-29 (36)
189 2elz_A Zinc finger protein 224 47.7 20 0.00069 21.3 3.5 33 171-203 10-45 (46)
190 2ytk_A Zinc finger protein 347 47.7 14 0.00049 22.0 2.7 33 171-203 10-45 (46)
191 2em0_A Zinc finger protein 224 47.6 18 0.00062 21.4 3.2 33 171-203 10-45 (46)
192 2em2_A Zinc finger protein 28 47.5 15 0.00051 21.9 2.8 33 171-203 10-45 (46)
193 2elt_A Zinc finger protein 406 47.4 8.6 0.0003 21.4 1.6 19 171-189 7-25 (36)
194 1s5p_A NAD-dependent deacetyla 47.4 5 0.00017 34.6 0.7 32 174-211 114-145 (235)
195 2eoq_A Zinc finger protein 224 47.3 18 0.00062 21.4 3.2 33 171-203 10-45 (46)
196 2eq0_A Zinc finger protein 347 47.3 14 0.00049 22.0 2.7 33 171-203 10-45 (46)
197 2emz_A ZFP-95, zinc finger pro 47.3 13 0.00046 22.2 2.6 33 171-203 10-45 (46)
198 2ytr_A Zinc finger protein 347 46.9 17 0.00057 21.6 3.0 33 171-203 10-45 (46)
199 2enh_A Zinc finger protein 28 46.8 17 0.00058 21.7 3.0 33 171-203 10-45 (46)
200 1klr_A Zinc finger Y-chromosom 46.8 9.4 0.00032 19.9 1.6 20 173-192 2-22 (30)
201 2ep3_A Zinc finger protein 484 46.7 15 0.0005 21.9 2.7 33 171-203 10-45 (46)
202 3h0g_L DNA-directed RNA polyme 46.6 12 0.00042 26.3 2.5 26 173-208 21-46 (63)
203 2elo_A Zinc finger protein 406 46.5 8.5 0.00029 21.7 1.4 19 171-189 7-25 (37)
204 2eoe_A Zinc finger protein 347 46.5 17 0.00057 21.6 2.9 33 171-203 10-45 (46)
205 1yk4_A Rubredoxin, RD; electro 46.2 5.2 0.00018 27.0 0.4 35 174-208 3-45 (52)
206 2el4_A Zinc finger protein 268 46.1 16 0.00056 21.6 2.8 33 171-203 10-45 (46)
207 2ytq_A Zinc finger protein 268 45.9 20 0.00068 21.3 3.2 33 171-203 10-45 (46)
208 2ytm_A Zinc finger protein 28 45.8 18 0.00061 21.6 3.0 33 171-203 10-45 (46)
209 2emy_A Zinc finger protein 268 45.7 16 0.00054 21.7 2.7 33 171-203 10-45 (46)
210 2em7_A Zinc finger protein 224 45.5 18 0.0006 21.5 2.9 33 171-203 10-45 (46)
211 2emf_A Zinc finger protein 484 45.5 16 0.00055 21.8 2.7 33 171-203 10-45 (46)
212 2ely_A Zinc finger protein 224 45.3 19 0.00064 21.5 3.0 33 171-203 10-45 (46)
213 2yuc_A TNF receptor-associated 45.3 6.7 0.00023 27.3 0.9 41 173-215 16-59 (76)
214 2elm_A Zinc finger protein 406 45.2 7.4 0.00025 22.4 1.0 19 171-189 7-25 (37)
215 2emh_A Zinc finger protein 484 44.8 15 0.00051 21.9 2.5 33 171-203 10-45 (46)
216 2ytj_A Zinc finger protein 484 44.7 17 0.0006 21.5 2.8 33 171-203 10-45 (46)
217 2kfq_A FP1; protein, de novo p 44.6 6.8 0.00023 21.8 0.8 18 172-189 1-18 (32)
218 2eov_A Zinc finger protein 484 44.4 22 0.00075 21.0 3.2 33 171-203 10-45 (46)
219 2ene_A Zinc finger protein 347 44.0 18 0.0006 21.5 2.7 33 171-203 10-45 (46)
220 1rik_A E6APC1 peptide; E6-bind 43.9 8.4 0.00029 20.2 1.1 17 173-189 2-18 (29)
221 2gli_A Protein (five-finger GL 43.8 32 0.0011 25.8 4.8 12 197-208 66-77 (155)
222 2k5r_A Uncharacterized protein 43.7 6 0.00021 30.2 0.5 12 158-169 9-20 (97)
223 3a43_A HYPD, hydrogenase nicke 43.6 6.3 0.00022 31.5 0.7 14 174-187 71-84 (139)
224 2eml_A Zinc finger protein 28 43.5 20 0.0007 21.2 3.0 33 171-203 10-45 (46)
225 3zyq_A Hepatocyte growth facto 43.3 32 0.0011 29.3 5.2 71 116-186 120-193 (226)
226 2els_A Zinc finger protein 406 43.3 10 0.00035 21.3 1.4 19 171-189 7-25 (36)
227 2ytd_A Zinc finger protein 473 43.1 19 0.00066 21.3 2.8 33 171-203 10-45 (46)
228 2emk_A Zinc finger protein 28 42.8 25 0.00084 20.9 3.3 33 171-203 10-45 (46)
229 2emm_A ZFP-95, zinc finger pro 42.6 20 0.00067 21.2 2.8 33 171-203 10-45 (46)
230 2hy6_A General control protein 42.4 37 0.0013 21.1 3.8 28 57-84 3-30 (34)
231 2ytg_A ZFP-95, zinc finger pro 42.3 19 0.00065 21.4 2.7 33 171-203 10-45 (46)
232 2m0f_A Zinc finger and BTB dom 42.3 9.8 0.00034 19.7 1.2 15 173-187 2-16 (29)
233 2em9_A Zinc finger protein 224 42.3 22 0.00074 21.0 3.0 33 171-203 10-45 (46)
234 2yte_A Zinc finger protein 473 42.2 14 0.00047 21.4 2.0 23 171-193 8-31 (42)
235 2ep0_A Zinc finger protein 28 42.2 20 0.00067 21.3 2.7 33 171-203 10-45 (46)
236 1twf_L ABC10-alpha, DNA-direct 42.2 11 0.00037 27.0 1.6 13 174-186 29-41 (70)
237 2lvu_A Zinc finger and BTB dom 48.2 5.3 0.00018 20.7 0.0 15 173-187 2-16 (26)
238 1njq_A Superman protein; zinc- 42.1 11 0.00037 21.7 1.4 23 171-193 4-27 (39)
239 2dlq_A GLI-kruppel family memb 42.0 23 0.00078 25.4 3.5 65 156-227 6-88 (124)
240 2emp_A Zinc finger protein 347 41.9 18 0.00062 21.5 2.5 33 171-203 10-45 (46)
241 2ytt_A Zinc finger protein 473 41.6 24 0.00081 21.0 3.1 33 171-203 10-45 (46)
242 2ep2_A Zinc finger protein 484 41.3 21 0.00073 21.1 2.8 33 171-203 10-45 (46)
243 2eme_A Zinc finger protein 473 41.2 23 0.00078 20.9 2.9 33 171-203 10-45 (46)
244 2eoo_A ZFP-95, zinc finger pro 41.2 19 0.00066 21.4 2.6 33 171-203 10-45 (46)
245 2el6_A Zinc finger protein 268 41.1 22 0.00077 21.1 2.9 33 171-203 10-45 (46)
246 2dmd_A Zinc finger protein 64, 40.8 21 0.0007 24.6 3.0 49 171-226 34-85 (96)
247 2epw_A Zinc finger protein 268 40.5 19 0.00066 21.3 2.5 33 171-203 10-45 (46)
248 2eos_A B-cell lymphoma 6 prote 40.2 15 0.00052 21.4 1.9 23 171-193 9-32 (42)
249 2lvr_A Zinc finger and BTB dom 46.4 6 0.0002 20.9 0.0 16 172-187 2-17 (30)
250 2yu8_A Zinc finger protein 347 39.8 19 0.00066 21.3 2.4 33 171-203 10-45 (46)
251 2rpc_A Zinc finger protein ZIC 39.8 22 0.00075 26.9 3.2 51 171-226 88-143 (155)
252 1rim_A E6APC2 peptide; E6-bind 39.7 14 0.00048 20.6 1.6 20 173-192 2-22 (33)
253 2wbs_A Krueppel-like factor 4; 39.6 18 0.00061 24.5 2.5 37 173-209 5-46 (89)
254 3hcs_A TNF receptor-associated 39.4 8.3 0.00028 30.9 0.8 42 173-216 110-153 (170)
255 2ysp_A Zinc finger protein 224 39.4 19 0.00066 21.3 2.4 33 171-203 10-45 (46)
256 2kmk_A Zinc finger protein GFI 39.3 17 0.00057 24.1 2.2 38 171-210 27-67 (82)
257 2em5_A ZFP-95, zinc finger pro 39.3 23 0.0008 21.0 2.7 33 171-203 10-45 (46)
258 2ct1_A Transcriptional repress 38.9 19 0.00064 24.1 2.4 51 171-228 13-68 (77)
259 2em8_A Zinc finger protein 224 38.8 22 0.00077 21.1 2.6 33 171-203 10-45 (46)
260 2k5c_A Uncharacterized protein 38.4 4.4 0.00015 30.4 -1.0 35 197-233 7-49 (95)
261 2en1_A Zinc finger protein 224 38.2 23 0.0008 20.9 2.6 33 171-203 10-45 (46)
262 3riy_A NAD-dependent deacetyla 38.2 9.5 0.00032 33.7 1.0 68 174-248 135-223 (273)
263 1pxe_A Neural zinc finger tran 37.9 11 0.00036 26.7 1.0 20 190-209 9-28 (63)
264 2elp_A Zinc finger protein 406 37.8 13 0.00046 20.9 1.3 23 171-193 7-31 (37)
265 2en6_A Zinc finger protein 268 37.6 23 0.00077 21.0 2.5 33 171-203 10-45 (46)
266 2ctu_A Zinc finger protein 483 37.4 6.2 0.00021 25.7 -0.3 31 172-208 17-47 (73)
267 4rxn_A Rubredoxin; electron tr 37.3 8.7 0.0003 26.2 0.5 13 174-186 4-16 (54)
268 2ytb_A Zinc finger protein 32; 37.3 18 0.0006 20.9 1.9 23 171-193 9-32 (42)
269 2jp9_A Wilms tumor 1; DNA bind 36.9 22 0.00076 25.3 2.8 36 172-209 35-75 (119)
270 2yso_A ZFP-95, zinc finger pro 36.7 25 0.00086 20.8 2.6 33 171-203 10-45 (46)
271 1zfd_A SWI5; DNA binding motif 36.1 18 0.00062 19.4 1.7 16 172-187 2-19 (32)
272 2en8_A Zinc finger protein 224 34.7 29 0.00098 20.4 2.6 33 171-203 10-45 (46)
273 2ept_A Zinc finger protein 32; 34.6 17 0.00059 21.0 1.5 23 171-193 8-31 (41)
274 1yui_A GAGA-factor; complex (D 34.1 17 0.00056 22.8 1.4 19 171-189 22-40 (54)
275 2eou_A Zinc finger protein 473 34.0 21 0.0007 21.0 1.8 32 171-202 10-44 (44)
276 2epv_A Zinc finger protein 268 33.9 18 0.00061 21.4 1.5 23 171-193 10-33 (44)
277 2yto_A Zinc finger protein 484 33.7 18 0.00061 21.6 1.5 32 171-202 10-44 (46)
278 2ej4_A Zinc finger protein ZIC 33.6 94 0.0032 21.0 5.6 60 157-227 13-84 (95)
279 2jmo_A Parkin; IBR, E3 ligase, 33.2 12 0.00042 26.9 0.7 30 183-213 11-40 (80)
280 2eoj_A Zinc finger protein 268 33.1 18 0.00063 21.1 1.5 32 171-202 10-44 (44)
281 2eoy_A Zinc finger protein 473 33.0 17 0.00059 21.6 1.3 32 171-202 10-45 (46)
282 2epc_A Zinc finger protein 32; 33.0 19 0.00065 20.7 1.5 23 171-193 9-32 (42)
283 2yu5_A Zinc finger protein 473 32.9 18 0.00061 21.3 1.4 23 171-193 10-33 (44)
284 2csh_A Zinc finger protein 297 32.7 33 0.0011 24.3 3.1 50 171-227 35-87 (110)
285 2en2_A B-cell lymphoma 6 prote 32.7 19 0.00065 20.8 1.5 19 171-189 9-27 (42)
286 2epp_A POZ-, at HOOK-, and zin 32.5 20 0.00069 24.7 1.8 23 171-193 11-34 (66)
287 2en7_A Zinc finger protein 268 32.2 23 0.00077 20.6 1.8 23 171-193 10-33 (44)
288 3iuf_A Zinc finger protein UBI 32.1 18 0.00063 22.2 1.4 23 171-193 5-28 (48)
289 2lvt_A Zinc finger and BTB dom 38.2 9.7 0.00033 20.0 0.0 15 173-187 2-16 (29)
290 1x6h_A Transcriptional repress 31.2 38 0.0013 22.6 3.0 50 171-227 13-69 (86)
291 2emx_A Zinc finger protein 268 31.2 21 0.00073 20.9 1.5 33 171-203 8-43 (44)
292 1tf6_A Protein (transcription 31.1 37 0.0013 26.6 3.4 51 171-226 102-157 (190)
293 3c3g_A Alpha/beta peptide with 31.0 94 0.0032 19.1 4.6 29 57-85 2-30 (33)
294 2eof_A Zinc finger protein 268 30.9 21 0.0007 20.8 1.4 32 171-202 10-44 (44)
295 2jyd_A F5 domain of myelin tra 30.9 15 0.00053 24.3 0.8 14 196-209 7-20 (46)
296 2eq3_A Zinc finger protein 347 30.8 21 0.00072 21.1 1.5 33 171-203 10-45 (46)
297 2jx1_A Myelin transcription fa 30.7 19 0.00066 21.9 1.2 11 199-209 2-12 (31)
298 2oxj_A Hybrid alpha/beta pepti 30.0 1E+02 0.0034 19.1 4.6 29 57-85 3-31 (34)
299 4ioe_A Secreted protein ESXB; 29.9 1.3E+02 0.0044 20.8 5.9 8 13-20 18-25 (93)
300 2ab3_A ZNF29; zinc finger prot 29.8 20 0.00067 18.5 1.1 16 173-188 2-19 (29)
301 2emb_A Zinc finger protein 473 29.6 22 0.00074 20.8 1.4 32 171-202 10-44 (44)
302 2dmi_A Teashirt homolog 3; zin 29.6 43 0.0015 23.8 3.3 12 173-184 80-91 (115)
303 1sp2_A SP1F2; zinc finger, tra 29.4 29 0.001 18.4 1.8 15 173-187 2-18 (31)
304 1vyx_A ORF K3, K3RING; zinc-bi 29.3 31 0.001 23.3 2.2 28 181-211 31-58 (60)
305 3mv2_A Coatomer subunit alpha; 28.6 3.4E+02 0.011 24.7 11.1 40 159-207 273-312 (325)
306 2en3_A ZFP-95, zinc finger pro 27.7 24 0.00083 20.9 1.3 32 171-202 10-44 (46)
307 2eln_A Zinc finger protein 406 27.6 26 0.00088 21.3 1.5 18 171-188 7-26 (38)
308 2eox_A Zinc finger protein 473 27.4 21 0.00071 20.9 1.0 19 171-189 10-28 (44)
309 2wq1_A General control protein 27.2 1.1E+02 0.0038 18.7 4.6 28 57-84 2-29 (33)
310 2k8d_A Peptide methionine sulf 26.6 20 0.00069 29.4 1.0 33 152-184 81-125 (151)
311 2ebt_A Krueppel-like factor 5; 26.1 41 0.0014 23.1 2.5 10 199-208 46-55 (100)
312 3c3f_A Alpha/beta peptide with 25.8 1.2E+02 0.0042 18.7 4.6 28 57-84 3-30 (34)
313 1t3j_A Mitofusin 1; coiled coi 25.2 2.1E+02 0.0072 21.6 6.4 33 56-88 62-94 (96)
314 2d9k_A FLN29 gene product; zin 25.0 31 0.0011 23.7 1.6 35 171-205 41-75 (75)
315 2enc_A Zinc finger protein 224 24.8 32 0.0011 20.3 1.5 33 171-203 10-45 (46)
316 1gh9_A 8.3 kDa protein (gene M 24.7 28 0.00094 24.9 1.3 46 174-230 5-56 (71)
317 2ent_A Krueppel-like factor 15 24.6 55 0.0019 19.2 2.6 33 171-203 10-47 (48)
318 1v54_F VI, cytochrome C oxidas 24.5 21 0.00073 27.1 0.7 14 171-184 77-90 (98)
319 1va1_A Transcription factor SP 24.3 32 0.0011 19.4 1.4 19 171-189 6-26 (37)
320 2odx_A Cytochrome C oxidase po 23.0 22 0.00074 26.1 0.5 14 171-184 54-67 (80)
321 1bhi_A CRE-BP1, ATF-2; CRE bin 22.3 38 0.0013 18.9 1.4 18 171-188 4-23 (38)
322 1kd8_B GABH BLL, GCN4 acid bas 22.2 1.5E+02 0.0052 18.5 4.9 29 57-85 3-31 (36)
323 1vq8_Z 50S ribosomal protein L 22.1 20 0.00069 26.4 0.2 28 157-186 27-58 (83)
324 1x3c_A Zinc finger protein 292 21.9 75 0.0026 22.9 3.2 29 157-189 15-45 (73)
325 1dl6_A Transcription factor II 21.0 35 0.0012 23.1 1.2 30 159-188 13-45 (58)
326 1kd8_A GABH AIV, GCN4 acid bas 21.0 1.6E+02 0.0055 18.4 4.2 29 57-85 3-31 (36)
327 2bni_A General control protein 20.5 1.5E+02 0.0051 18.3 3.8 28 57-84 3-30 (34)
328 3ajm_A Programmed cell death p 20.0 2.4E+02 0.0082 24.2 6.5 14 95-108 161-174 (213)
No 1
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.3e-29 Score=223.66 Aligned_cols=171 Identities=10% Similarity=0.202 Sum_probs=137.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHhhcCCC---CC---cchHHHHHHHHH---------Hhhh-hcCCCCC
Q 025405 53 QSQMVKELEDATIQLMEAFGDCTHHSAAIQSVGNTYQPG---TE---LTDFKKLLVDED---------AKSR-AASSSVP 116 (253)
Q Consensus 53 ~~~~vkeLe~~v~eL~~~~~e~~~~~~Alq~l~~~yq~~---~e---~~df~k~~~~e~---------~~~k-~~s~~~~ 116 (253)
..+.|++|.+.+++|+.++++.+.+..+++++++.|... .+ ..++.++...++ .++. .++....
T Consensus 59 ~~~~v~~l~~~y~~l~~~~~~~~~~~~~~~~~K~~yk~~~d~~~~~~~~twd~y~~~e~~ap~l~~~~~~~~~~~~~~~~ 138 (267)
T 3htk_C 59 IEEQVADITSTYKLLSTYESESNSFDEHIKDLKKNFKQSSDACPQIDLSTWDKYRTGELTAPKLSELYLNMPTPEPATMV 138 (267)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCTTHHHHHHHTSSCCCCHHHHHHTCCCCSCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCHHHHHHHhcCCcCCchHHHHHHhccccCccccc
Confidence 578999999999999999999999999999998887642 12 234444444333 1222 2223345
Q ss_pred CCCchh-hhHHHHhhhccCCCCCCC----CCCcceeeecccCccccccCCCCccccccccCCcccCCCCcccchhhHhhh
Q 025405 117 PNDPLH-KFREAVWNVHHAGELMPG----EEQEDIVMTSTQSNILNISCPLSGKPITELAEPVRRYQILQIYPRFSFLPF 191 (253)
Q Consensus 117 ~~~~~~-~Fke~I~~v~~~g~p~p~----deddDi~v~~~q~~~~n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~ 191 (253)
.+++++ .||..+|.+++|+.|+|+ ++||||+|++. ..+++||||+. .|++||+++.|||+|+|.+|.+|
T Consensus 139 ~~~~~~~~lk~~~~i~~~P~~~lPd~~~~~dDDDI~v~~~---~~el~CPIcl~---~f~DPVts~~CGHsFcR~cI~~~ 212 (267)
T 3htk_C 139 NNTDTLKILKVLPYIWNDPTCVIPDLQNPADEDDLQIEGG---KIELTCPITCK---PYEAPLISRKCNHVFDRDGIQNY 212 (267)
T ss_dssp CCCHHHHHHHHHHHHHHCTTBCCCCCSSTTCSSCCCCCSS---BCCSBCTTTSS---BCSSEEEESSSCCEEEHHHHHHH
T ss_pred ccchHHHHHHHccccccCCCCCCCCCCCCCCCccceecCC---ceeeECcCccC---cccCCeeeCCCCCcccHHHHHHH
Confidence 678899 999999999999999986 57889998764 46999999995 57999999999999999999999
Q ss_pred hhcCCCCCCccccccccccccCcccccHhHhhHhHHHHh
Q 025405 192 CSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFMQV 230 (253)
Q Consensus 192 i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~~~ 230 (253)
++ .++...||++||++.++..+|++|..|++.+...+.
T Consensus 213 ~~-~~~~~~CPvtGCr~~l~~~dL~pN~~L~~lve~~k~ 250 (267)
T 3htk_C 213 LQ-GYTTRDCPQAACSQVVSMRDFVRDPIMELRCKIAKM 250 (267)
T ss_dssp ST-TCSCEECSGGGCSCEECGGGEEECHHHHHHHHHHHH
T ss_pred HH-hCCCCCCCcccccCcCchhhCCcCHHHHHHHHHHHH
Confidence 98 445689999999999999999999999887765443
No 2
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=3.1e-16 Score=120.19 Aligned_cols=74 Identities=14% Similarity=0.233 Sum_probs=64.0
Q ss_pred ccccccCCCCccccccccCCcccCCCCcccchhhHhhhhhcC---CCCCCccccccccc-cccCcccccHhHhhHhHHHH
Q 025405 154 NILNISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLD---CYFPRCNHFGCQLY-FNWKKCVFKYHLKGHMLFMQ 229 (253)
Q Consensus 154 ~~~n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~---~~~~~CPv~GC~~~-l~~~dL~~D~~l~~~~~~~~ 229 (253)
....|+||||+. .|.+||+...|||+|+|.+|..||..+ ++...||+.||++. ++..+|++|..|++.+...+
T Consensus 4 ~~~~~~CPI~~~---~~~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~pn~~L~~~I~~~~ 80 (94)
T 2yu4_A 4 GSSGFTCPITKE---EMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLIQDEALRRAIENHN 80 (94)
T ss_dssp CSSCCBCTTTCS---BCSSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEEECHHHHHHHHHHH
T ss_pred CCcEeECcCcCc---hhcCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCcCCHHHHHHHHHHH
Confidence 346899999995 479999987899999999999999733 24678999999998 99999999999999987665
Q ss_pred h
Q 025405 230 V 230 (253)
Q Consensus 230 ~ 230 (253)
.
T Consensus 81 ~ 81 (94)
T 2yu4_A 81 K 81 (94)
T ss_dssp T
T ss_pred H
Confidence 3
No 3
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.31 E-value=1.1e-12 Score=98.86 Aligned_cols=64 Identities=16% Similarity=0.050 Sum_probs=55.4
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHHHH
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFMQ 229 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~~ 229 (253)
.|.||||+. .|.+||... |||+|+|.+|..|+. . ...||+ |...++..+|+++..|++.+....
T Consensus 14 ~~~CpI~~~---~m~dPV~~~-cGhtf~r~~I~~~l~-~--~~~cP~--~~~~l~~~~l~pn~~L~~~i~~~~ 77 (85)
T 2kr4_A 14 EFRDPLMDT---LMTDPVRLP-SGTVMDRSIILRHLL-N--SPTDPF--NRQMLTESMLEPVPELKEQIQAWM 77 (85)
T ss_dssp TTBCTTTCS---BCSSEEECT-TSCEEEHHHHHHHHH-H--CSBCTT--TCCBCCGGGCEECHHHHHHHHHHH
T ss_pred heECcccCc---hhcCCeECC-CCCEECHHHHHHHHh-c--CCCCCC--CcCCCChHhcchHHHHHHHHHHHH
Confidence 799999994 579999976 999999999999998 2 367999 667788899999999998886554
No 4
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.14 E-value=1.4e-11 Score=115.69 Aligned_cols=78 Identities=17% Similarity=0.297 Sum_probs=63.4
Q ss_pred CCCcceeeecccCccccccCCCCccccccccCCcccCCCCcc--cchhhHhhhhhcCCCCCCccccccccccccCccccc
Q 025405 141 EEQEDIVMTSTQSNILNISCPLSGKPITELAEPVRRYQILQI--YPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFK 218 (253)
Q Consensus 141 deddDi~v~~~q~~~~n~~CPlT~~~i~~l~~Pv~s~~CgHv--Yek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D 218 (253)
++||||+++. ..++++||||+.+ |..|+|+..|.|. ||..+++++.. +.+..+||+ |++.+...+|.-|
T Consensus 236 d~DdDIv~~s---~~vSL~CPlS~~r---i~~PvRg~~C~HlQCFDl~sfL~~~~-~~~~W~CPI--C~k~~~~~dL~ID 306 (371)
T 3i2d_A 236 DEEMGLTTTS---TIMSLQCPISYTR---MKYPSKSINCKHLQCFDALWFLHSQL-QIPTWQCPV--CQIDIALENLAIS 306 (371)
T ss_dssp CC------CE---EEEESBCTTTSSB---CSSEEEETTCCSSCCEEHHHHHHHHH-HSCCCBCTT--TCCBCCGGGEEEB
T ss_pred CCCCceeeee---eEEeecCCCcccc---ccccCcCCcCCCcceECHHHHHHHhh-cCCceeCCC--CCcccCHHHeeEc
Confidence 5677888764 3589999999965 6999999999998 99999999987 677899999 9999999999999
Q ss_pred HhHhhHhHH
Q 025405 219 YHLKGHMLF 227 (253)
Q Consensus 219 ~~l~~~~~~ 227 (253)
..|.+.+.-
T Consensus 307 ~~~~~IL~~ 315 (371)
T 3i2d_A 307 EFVDDILQN 315 (371)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999876553
No 5
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.13 E-value=4.3e-11 Score=92.89 Aligned_cols=65 Identities=17% Similarity=0.035 Sum_probs=56.3
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHHHHh
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFMQV 230 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~~~ 230 (253)
.|.||||+. .|.+||... |||+|+|.+|..|+. . ...||+ |...++..+|+++..|++.+.....
T Consensus 29 ~~~CpI~~~---~m~dPV~~~-cGhtf~r~~I~~~l~-~--~~~cP~--~~~~l~~~~L~pn~~Lk~~I~~~~~ 93 (100)
T 2kre_A 29 EFRDPLMDT---LMTDPVRLP-SGTIMDRSIILRHLL-N--SPTDPF--NRQTLTESMLEPVPELKEQIQAWMR 93 (100)
T ss_dssp TTBCTTTCS---BCSSEEEET-TTEEEEHHHHHHHTT-S--CSBCSS--SCCBCCTTSSEECHHHHHHHHHHHH
T ss_pred hhCCcCccC---cccCCeECC-CCCEEchHHHHHHHH-c--CCCCCC--CCCCCChhhceECHHHHHHHHHHHH
Confidence 789999994 579999987 999999999999997 2 468999 7777889999999999998875543
No 6
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=99.08 E-value=2.3e-11 Score=86.60 Aligned_cols=55 Identities=16% Similarity=0.134 Sum_probs=44.1
Q ss_pred ccccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCccccc
Q 025405 156 LNISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFK 218 (253)
Q Consensus 156 ~n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D 218 (253)
.++.||||+.+ |.+||.+..|||+|||.+|..||+ +++ .||+.| ..|+.+||++-
T Consensus 2 ~~~~CpIs~~~---m~dPV~~~~sG~~yer~~I~~~l~-~~~--~cP~t~--~~L~~~~Lip~ 56 (61)
T 2bay_A 2 SHMLCAISGKV---PRRPVLSPKSRTIFEKSLLEQYVK-DTG--NDPITN--EPLSIEEIVEI 56 (61)
T ss_dssp --CCCTTTCSC---CSSEEEETTTTEEEEHHHHHHHHH-HHS--BCTTTC--CBCCGGGCEEC
T ss_pred CeEEecCCCCC---CCCCEEeCCCCcEEcHHHHHHHHH-hCC--CCcCCc--CCCChhhcEEC
Confidence 37899999965 699999877999999999999997 332 499966 55788888763
No 7
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.08 E-value=1.3e-10 Score=89.94 Aligned_cols=66 Identities=9% Similarity=-0.058 Sum_probs=56.6
Q ss_pred cccCCCCccccccccCCcccCCCC-cccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHHHHhh
Q 025405 157 NISCPLSGKPITELAEPVRRYQIL-QIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFMQVL 231 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~Cg-HvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~~~~ 231 (253)
.|.||||+. .|.+||.. .|| |+|+|.+|..|+. . ...||+ |...|+..+|+++..|++.+.....-
T Consensus 22 ~~~CpI~~~---~m~dPV~~-~cG~htf~r~cI~~~l~-~--~~~cP~--~~~~l~~~~L~pn~~Lk~~I~~~~~~ 88 (98)
T 1wgm_A 22 EFLDPIMST---LMCDPVVL-PSSRVTVDRSTIARHLL-S--DQTDPF--NRSPLTMDQIRPNTELKEKIQRWLAE 88 (98)
T ss_dssp TTBCTTTCS---BCSSEEEC-TTTCCEEEHHHHHHHTT-T--SCBCTT--TCSBCCTTTSEECHHHHHHHHHHHHH
T ss_pred hcCCcCccc---cccCCeEC-CCCCeEECHHHHHHHHH-h--CCCCCC--CCCCCChhhceEcHHHHHHHHHHHHH
Confidence 789999994 47999996 599 9999999999997 2 458999 77889999999999999988765543
No 8
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.95 E-value=3.4e-10 Score=96.85 Aligned_cols=65 Identities=9% Similarity=-0.083 Sum_probs=55.2
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHHHH
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFMQ 229 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~~ 229 (253)
.|.||||+. .|.+||.. .|||+|+|.+|..|+.. ++. .||+ |...++..+|+|+..|+..+.-..
T Consensus 106 ~f~CPI~~e---lm~DPV~~-~~Ghtfer~~I~~~l~~-~~~-tcP~--t~~~l~~~~L~pN~~Lk~~Ie~~~ 170 (179)
T 2f42_A 106 YLCGKISFE---LMREPCIT-PSGITYDRKDIEEHLQR-VGH-FDPV--TRSPLTQDQLIPNLAMKEVIDAFI 170 (179)
T ss_dssp GGBCTTTCS---BCSSEEEC-TTSCEEEHHHHHHHHHH-TCS-BCTT--TCCBCCGGGCEECHHHHHHHHHHH
T ss_pred hhcccCccc---cCCCCeEC-CCCCEECHHHHHHHHHh-CCC-CCCC--CcCCCChhhCcchHHHHHHHHHHH
Confidence 789999995 47999997 59999999999999973 333 6999 677889999999999999887543
No 9
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=98.93 E-value=3.4e-10 Score=106.00 Aligned_cols=78 Identities=15% Similarity=0.220 Sum_probs=62.3
Q ss_pred CCCcceeeecccCccccccCCCCccccccccCCcccCCCCcc--cchhhHhhhhhcCCCCCCccccccccccccCccccc
Q 025405 141 EEQEDIVMTSTQSNILNISCPLSGKPITELAEPVRRYQILQI--YPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFK 218 (253)
Q Consensus 141 deddDi~v~~~q~~~~n~~CPlT~~~i~~l~~Pv~s~~CgHv--Yek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D 218 (253)
|+||||+++. ..++++||||+.+ |..|+|+..|.|. ||..+++++.. +.+.-+||+ |++.+...+|.-|
T Consensus 202 d~DddI~~~~---~~vSL~CPlS~~r---i~~P~Rg~~C~HlqCFDl~sfL~~~~-~~~~W~CPi--C~k~~~~~dL~ID 272 (360)
T 4fo9_A 202 DPDSEIATTS---LRVSLMCPLGKMR---LTIPCRAVTCTHLQCFDAALYLQMNE-KKPTWICPV--CDKKAAYESLILD 272 (360)
T ss_dssp --------CC---EEEESBCTTTCSB---CSSEEEETTCCCCCCEEHHHHHHHHH-HSCCCBCTT--TCSBCCGGGEEEB
T ss_pred CCccceeeee---eEEeeeCCCccce---eccCCcCCCCCCCccCCHHHHHHHHh-hCCCeECCC--CCcccCHHHeEEc
Confidence 4567777653 4589999999954 6999999999999 99999999997 567899999 9999999999999
Q ss_pred HhHhhHhHH
Q 025405 219 YHLKGHMLF 227 (253)
Q Consensus 219 ~~l~~~~~~ 227 (253)
..+.+-+.-
T Consensus 273 ~~~~~IL~~ 281 (360)
T 4fo9_A 273 GLFMEILND 281 (360)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999887654
No 10
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.90 E-value=6e-10 Score=97.68 Aligned_cols=62 Identities=10% Similarity=-0.073 Sum_probs=53.9
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhH
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHML 226 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~ 226 (253)
.+.||||+. .|.+||... |||+|++..|..|+. .++ ..||+ |...++..+|+|+..|++.+.
T Consensus 208 ~~~c~i~~~---~~~dPv~~~-~gh~f~~~~i~~~~~-~~~-~~cP~--~~~~~~~~~l~~n~~l~~~i~ 269 (281)
T 2c2l_A 208 YLCGKISFE---LMREPCITP-SGITYDRKDIEEHLQ-RVG-HFNPV--TRSPLTQEQLIPNLAMKEVID 269 (281)
T ss_dssp TTBCTTTCS---BCSSEEECS-SCCEEETTHHHHHHH-HTC-SSCTT--TCCCCCGGGCEECHHHHHHHH
T ss_pred ccCCcCcCC---HhcCCeECC-CCCEECHHHHHHHHH-HCC-CCCcC--CCCCCchhcCcccHHHHHHHH
Confidence 788999995 479999966 999999999999997 333 33999 889999999999999998876
No 11
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.88 E-value=1.1e-09 Score=79.66 Aligned_cols=65 Identities=22% Similarity=0.247 Sum_probs=56.3
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHHHH
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFMQ 229 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~~ 229 (253)
.+.|||++. .|.+||.- .|||+|.+..|..|++ .+...||+ |...+...+|.++..|++.+....
T Consensus 8 ~~~C~IC~~---~~~~Pv~~-~CgH~fc~~Ci~~~~~--~~~~~CP~--C~~~~~~~~l~~n~~l~~~i~~~~ 72 (78)
T 1t1h_A 8 YFRCPISLE---LMKDPVIV-STGQTYERSSIQKWLD--AGHKTCPK--SQETLLHAGLTPNYVLKSLIALWC 72 (78)
T ss_dssp SSSCTTTSC---CCSSEEEE-TTTEEEEHHHHHHHHT--TTCCBCTT--TCCBCSSCCCEECTTTHHHHHHHH
T ss_pred cCCCCCccc---cccCCEEc-CCCCeecHHHHHHHHH--HCcCCCCC--CcCCCChhhCccCHHHHHHHHHHH
Confidence 788999995 46999986 5999999999999997 34678999 999999999999999988776543
No 12
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.52 E-value=7.5e-08 Score=71.92 Aligned_cols=68 Identities=9% Similarity=0.016 Sum_probs=56.9
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCcccccccccc-ccCcccccHhHhhHhHHHHh
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYF-NWKKCVFKYHLKGHMLFMQV 230 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l-~~~dL~~D~~l~~~~~~~~~ 230 (253)
.+.|||.+. .|.+||.-..|||+|.+..|..++. ..+...||+ |...+ ...++.++..|+..+..++.
T Consensus 13 ~~~C~IC~~---~~~~p~~~~~CgH~fC~~Ci~~~~~-~~~~~~CP~--Cr~~~~~~~~~~~n~~l~~~i~~~~~ 81 (92)
T 3ztg_A 13 ELLCLICKD---IMTDAVVIPCCGNSYCDECIRTALL-ESDEHTCPT--CHQNDVSPDALIANKFLRQAVNNFKN 81 (92)
T ss_dssp TTEETTTTE---ECSSCEECTTTCCEECHHHHHHHHH-HCTTCCCTT--TCCSSCCTTSCEECHHHHHHHHHHHH
T ss_pred CCCCCCCCh---hhcCceECCCCCCHHHHHHHHHHHH-hcCCCcCcC--CCCcCCCccccCcCHHHHHHHHHHHH
Confidence 688999994 5799998655999999999999997 445579999 99986 78899999999887766554
No 13
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.38 E-value=2.6e-07 Score=70.09 Aligned_cols=69 Identities=13% Similarity=0.104 Sum_probs=59.5
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHHHHhhcc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFMQVLEY 233 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~~~~~~ 233 (253)
.+.|||.+. .+.+||.-..|||+|-+..|..|+. .+..||+ |...+...++.++..|+.-+..++.+.+
T Consensus 22 ~~~C~IC~~---~~~~p~~~~~CgH~fC~~Ci~~~~~---~~~~CP~--Cr~~~~~~~l~~n~~l~~~i~~~~~~~~ 90 (99)
T 2y43_A 22 LLRCGICFE---YFNIAMIIPQCSHNYCSLCIRKFLS---YKTQCPT--CCVTVTEPDLKNNRILDELVKSLNFARN 90 (99)
T ss_dssp HTBCTTTCS---BCSSEEECTTTCCEEEHHHHHHHHT---TCCBCTT--TCCBCCGGGCEECHHHHHHHHHHHHHHH
T ss_pred CCCcccCCh---hhCCcCEECCCCCHhhHHHHHHHHH---CCCCCCC--CCCcCChhhCCcCHHHHHHHHHHHHHHH
Confidence 678999984 5699998768999999999999997 3468998 9999999999999999988877776654
No 14
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.26 E-value=8.6e-07 Score=68.03 Aligned_cols=62 Identities=16% Similarity=0.264 Sum_probs=51.2
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhH
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGH 224 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~ 224 (253)
.+.|||... .+.+|+. ..|||+|-+..|..++..+.+...||+ |...+...++.++..+..-
T Consensus 21 ~~~C~IC~~---~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~--Cr~~~~~~~~~~~~~l~~~ 82 (112)
T 1jm7_A 21 ILECPICLE---LIKEPVS-TKCDHIFCKFCMLKLLNQKKGPSQCPL--CKNDITKRSLQESTRFSQL 82 (112)
T ss_dssp HTSCSSSCC---CCSSCCB-CTTSCCCCSHHHHHHHHSSSSSCCCTT--TSCCCCTTTCBCCCSSSHH
T ss_pred CCCCcccCh---hhcCeEE-CCCCCHHHHHHHHHHHHhCCCCCCCcC--CCCcCCHhhcCccHHHHHH
Confidence 578999985 4699998 579999999999999984455678999 9999999998887654443
No 15
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.24 E-value=7.3e-07 Score=68.18 Aligned_cols=69 Identities=10% Similarity=0.110 Sum_probs=56.0
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHHHHhhc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFMQVLE 232 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~~~~~ 232 (253)
.+.|||-+. .|.+||....|||+|-+.-|..|+... ...||+ |...++.++|+....+..-...++.|.
T Consensus 22 ~~~C~IC~~---~~~~p~~~~~CgH~FC~~Ci~~~~~~~--~~~CP~--Cr~~~~~~~l~~~~~~~~i~~~~~~l~ 90 (100)
T 3lrq_A 22 VFRCFICME---KLRDARLCPHCSKLCCFSCIRRWLTEQ--RAQCPH--CRAPLQLRELVNCRWAEEVTQQLDTLQ 90 (100)
T ss_dssp HTBCTTTCS---BCSSEEECTTTCCEEEHHHHHHHHHHT--CSBCTT--TCCBCCGGGCEECTTHHHHHHHHHHHC
T ss_pred CCCCccCCc---cccCccccCCCCChhhHHHHHHHHHHC--cCCCCC--CCCcCCHHHhHhhHHHHHHHHHHHHHH
Confidence 688999995 469999978899999999999999722 378999 999999999998877665555444443
No 16
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.23 E-value=1.4e-06 Score=68.13 Aligned_cols=67 Identities=15% Similarity=0.118 Sum_probs=57.9
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHHHHhhcc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFMQVLEY 233 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~~~~~~ 233 (253)
.+.|||.+. .|.+||.-..|||+|-+..|..++. ..||+ |...+...++.++..|+.-+...+.+.+
T Consensus 22 ~~~C~IC~~---~~~~pv~~~~CgH~fC~~Ci~~~~~-----~~CP~--Cr~~~~~~~~~~n~~l~~l~~~~~~~~~ 88 (117)
T 1jm7_B 22 LLRCSRCTN---ILREPVCLGGCEHIFCSNCVSDCIG-----TGCPV--CYTPAWIQDLKINRQLDSMIQLCSKLRN 88 (117)
T ss_dssp TTSCSSSCS---CCSSCBCCCSSSCCBCTTTGGGGTT-----TBCSS--SCCBCSCSSCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCh---HhhCccEeCCCCCHHHHHHHHHHhc-----CCCcC--CCCcCccccccccHHHHHHHHHHHHHHH
Confidence 688999984 4699998657999999999999995 67999 9999999999999998888777666553
No 17
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.19 E-value=1.1e-06 Score=64.23 Aligned_cols=61 Identities=15% Similarity=0.168 Sum_probs=50.0
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHH
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLF 227 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~ 227 (253)
.+.|||.+. .+.+||. ..|||+|-+..|..+++ ....||+ |...+. ..+.++..|.++++-
T Consensus 15 ~~~C~IC~~---~~~~p~~-~~CgH~fC~~Ci~~~~~---~~~~CP~--Cr~~~~-~~~~~~~~l~~~~~~ 75 (81)
T 2csy_A 15 PFRCFICRQ---AFQNPVV-TKCRHYFCESCALEHFR---ATPRCYI--CDQPTG-GIFNPAKELMAKLQK 75 (81)
T ss_dssp CSBCSSSCS---BCCSEEE-CTTSCEEEHHHHHHHHH---HCSBCSS--SCCBCC-SCCEECHHHHHHHSS
T ss_pred CCCCcCCCc---hhcCeeE-ccCCCHhHHHHHHHHHH---CCCcCCC--cCcccc-ccCCcHHHHHHHHHh
Confidence 678999985 4699998 67999999999999997 2568999 999887 778888777666543
No 18
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.18 E-value=5.4e-07 Score=65.01 Aligned_cols=61 Identities=16% Similarity=0.272 Sum_probs=50.7
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcC----CCCCCccccccccccccCcccccHhHhh
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLD----CYFPRCNHFGCQLYFNWKKCVFKYHLKG 223 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~----~~~~~CPv~GC~~~l~~~dL~~D~~l~~ 223 (253)
.+.|||.+. .+.+|+. ..|||+|-+.-|..|++.. .+...||+ |...+...+|.++..|+.
T Consensus 12 ~~~C~IC~~---~~~~p~~-l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~--Cr~~~~~~~l~~n~~l~~ 76 (79)
T 2egp_A 12 EVTCPICLE---LLTEPLS-LDCGHSLCRACITVSNKEAVTSMGGKSSCPV--CGISYSFEHLQANQHLAN 76 (79)
T ss_dssp CCEETTTTE---ECSSCCC-CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSS--SCCCCCSSGGGTCSSSCC
T ss_pred CCCCcCCCc---ccCCeeE-CCCCCHHHHHHHHHHHHhcccCCCCCCcCCC--CCCcCCHhhCCcCHHHHH
Confidence 678999985 4699998 4799999999999999732 34689999 999999999988877653
No 19
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.15 E-value=2.3e-06 Score=70.43 Aligned_cols=63 Identities=10% Similarity=0.089 Sum_probs=53.9
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccC-cccccHhHhhHhHH
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWK-KCVFKYHLKGHMLF 227 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~-dL~~D~~l~~~~~~ 227 (253)
.+.|||.+. .|.+||. ..|||+|.+..|..++. .+...||+ |...+... .|.++..|+.-+..
T Consensus 78 ~~~C~IC~~---~~~~pv~-~~CgH~fC~~Ci~~~~~--~~~~~CP~--Cr~~~~~~~~l~~n~~l~~lv~~ 141 (150)
T 1z6u_A 78 SFMCVCCQE---LVYQPVT-TECFHNVCKDCLQRSFK--AQVFSCPA--CRHDLGQNYIMIPNEILQTLLDL 141 (150)
T ss_dssp HTBCTTTSS---BCSSEEE-CTTSCEEEHHHHHHHHH--TTCCBCTT--TCCBCCTTCCCCBCHHHHHHHHH
T ss_pred CCEeecCCh---hhcCCEE-cCCCCchhHHHHHHHHH--hCCCcCCC--CCccCCCCCCCCCCHHHHHHHHH
Confidence 678999985 4699998 68999999999999997 34568999 99999988 89999888876653
No 20
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.14 E-value=1.3e-06 Score=72.19 Aligned_cols=66 Identities=9% Similarity=0.135 Sum_probs=54.8
Q ss_pred ccccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCcccccccccc-ccCcccccHhHhhHhHHH
Q 025405 156 LNISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYF-NWKKCVFKYHLKGHMLFM 228 (253)
Q Consensus 156 ~n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l-~~~dL~~D~~l~~~~~~~ 228 (253)
-.+.|||.+. .|.+||.-..|||+|.+..|..++. .+...||+ |...+ ....|.+|..|+.-+..+
T Consensus 53 ~~~~C~IC~~---~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~~CP~--Cr~~~~~~~~l~~~~~l~~~i~~~ 119 (165)
T 2ckl_B 53 SELMCPICLD---MLKNTMTTKECLHRFCADCIITALR--SGNKECPT--CRKKLVSKRSLRPDPNFDALISKI 119 (165)
T ss_dssp HHHBCTTTSS---BCSSEEEETTTCCEEEHHHHHHHHH--TTCCBCTT--TCCBCCSGGGEEECHHHHHHHHHH
T ss_pred CCCCCcccCh---HhhCcCEeCCCCChhHHHHHHHHHH--hCcCCCCC--CCCcCCCcccCCcCHHHHHHHHHH
Confidence 3678999984 5699999878999999999999997 34678999 99987 567799999988766544
No 21
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.11 E-value=8.9e-07 Score=69.44 Aligned_cols=67 Identities=13% Similarity=0.086 Sum_probs=56.1
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHHHHhh
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFMQVL 231 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~~~~ 231 (253)
.+.|||.+. .+.+||.- .|||+|-+..|..+++.. ...||+ |...++.+++.+|..+++.+.-.++-
T Consensus 18 ~~~C~IC~~---~~~~p~~~-~CgH~fC~~Ci~~~~~~~--~~~CP~--Cr~~~~~~~~~~~~~l~~~i~~l~v~ 84 (118)
T 3hct_A 18 KYECPICLM---ALREAVQT-PCGHRFCKACIIKSIRDA--GHKCPV--DNEILLENQLFPDNFAKREILSLMVK 84 (118)
T ss_dssp GGBCTTTCS---BCSSEEEC-TTSCEEEHHHHHHHHHHH--CSBCTT--TCCBCCGGGCEECHHHHHHHHTSEEE
T ss_pred CCCCCcCCh---hhcCeEEC-CcCChhhHHHHHHHHhhC--CCCCCC--CCCCcCHHhcccCHHHHHHHccceeE
Confidence 689999995 46999985 699999999999999722 348999 99999999999999998877655543
No 22
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.09 E-value=2.6e-06 Score=59.86 Aligned_cols=51 Identities=18% Similarity=0.247 Sum_probs=43.6
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKC 215 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL 215 (253)
.+.|||.+. .+.+|+. ..|||+|-+.-|..+++ +....||+ |...++.+++
T Consensus 15 ~~~C~IC~~---~~~~p~~-~~CgH~fC~~Ci~~~~~--~~~~~CP~--Cr~~~~~~~i 65 (66)
T 2ecy_A 15 KYKCEKCHL---VLCSPKQ-TECGHRFCESCMAALLS--SSSPKCTA--CQESIVKDKV 65 (66)
T ss_dssp CEECTTTCC---EESSCCC-CSSSCCCCHHHHHHHHT--TSSCCCTT--TCCCCCTTTC
T ss_pred CCCCCCCCh---HhcCeeE-CCCCCHHHHHHHHHHHH--hCcCCCCC--CCcCCChhhc
Confidence 688999985 4699998 68999999999999995 45678999 9998887765
No 23
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.08 E-value=1.2e-06 Score=63.47 Aligned_cols=61 Identities=16% Similarity=0.273 Sum_probs=50.9
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcC---CCCCCccccccccccccCcccccHhHhh
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLD---CYFPRCNHFGCQLYFNWKKCVFKYHLKG 223 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~---~~~~~CPv~GC~~~l~~~dL~~D~~l~~ 223 (253)
.+.|||.+. .+.+|+. ..|||+|-+.-|..|+... .+...||+ |...++.+++.++..|+.
T Consensus 19 ~~~C~IC~~---~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~--Cr~~~~~~~~~~n~~l~~ 82 (85)
T 2ecw_A 19 EVTCPICLE---LLKEPVS-ADCNHSFCRACITLNYESNRNTDGKGNCPV--CRVPYPFGNLKPNLHVAN 82 (85)
T ss_dssp TTSCTTTCS---CCSSCEE-CTTSCCBCHHHHHHHHHHSBCTTSCBCCTT--TCCCCCTTCCEECSCCCS
T ss_pred CCCCcCCCh---hhCccee-CCCCCHHHHHHHHHHHHhccCCCCCCCCCC--CCCcCCHHhCCcCHHHHH
Confidence 678999985 4699997 4699999999999999732 24789998 999999999998877653
No 24
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.08 E-value=2.7e-06 Score=65.42 Aligned_cols=61 Identities=11% Similarity=0.232 Sum_probs=50.4
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccC----cccccHhHhhHh
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWK----KCVFKYHLKGHM 225 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~----dL~~D~~l~~~~ 225 (253)
.+.|||.+. .+.+||.-..|||+|-+..|..++. ....||+ |...+... ++.+|..|+.-+
T Consensus 15 ~~~C~IC~~---~~~~p~~~~~CgH~fC~~Ci~~~~~---~~~~CP~--Cr~~~~~~~~~~~l~~n~~l~~~i 79 (108)
T 2ckl_A 15 HLMCVLCGG---YFIDATTIIECLHSFCKTCIVRYLE---TSKYCPI--CDVQVHKTRPLLNIRSDKTLQDIV 79 (108)
T ss_dssp GTBCTTTSS---BCSSEEEETTTCCEEEHHHHHHHHT---SCSBCTT--TCCBSCSSCGGGGEEECHHHHHHH
T ss_pred cCCCccCCh---HHhCcCEeCCCCChhhHHHHHHHHH---hCCcCcC--CCccccccCcccccCcCHHHHHHH
Confidence 688999984 4699999768999999999999997 2378999 99988776 777777766544
No 25
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.08 E-value=3.7e-06 Score=66.22 Aligned_cols=62 Identities=8% Similarity=0.053 Sum_probs=52.7
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCcccccccccccc-CcccccHhHhhHhH
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW-KKCVFKYHLKGHML 226 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~-~dL~~D~~l~~~~~ 226 (253)
.+.|||.+. .|.+||.- .|||+|.+..|..++. .+...||+ |...+.. .++.++..|+..+.
T Consensus 52 ~~~C~IC~~---~~~~p~~~-~CgH~fC~~Ci~~~~~--~~~~~CP~--Cr~~~~~~~~~~~n~~l~~~i~ 114 (124)
T 3fl2_A 52 TFQCICCQE---LVFRPITT-VCQHNVCKDCLDRSFR--AQVFSCPA--CRYDLGRSYAMQVNQPLQTVLN 114 (124)
T ss_dssp HTBCTTTSS---BCSSEEEC-TTSCEEEHHHHHHHHH--TTCCBCTT--TCCBCCTTCCCCCCHHHHHHHH
T ss_pred CCCCCcCCh---HHcCcEEe-eCCCcccHHHHHHHHh--HCcCCCCC--CCccCCCCCCCCCCHHHHHHHH
Confidence 578999984 56899985 7999999999999997 44568999 9998887 88999998887663
No 26
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.05 E-value=2.6e-06 Score=61.71 Aligned_cols=61 Identities=13% Similarity=0.247 Sum_probs=51.3
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhc---CCCCCCccccccccccccCcccccHhHhh
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSL---DCYFPRCNHFGCQLYFNWKKCVFKYHLKG 223 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~---~~~~~~CPv~GC~~~l~~~dL~~D~~l~~ 223 (253)
.+.|||... .+.+|+.- .|||+|-+.-|..|++. ..+...||+ |...+...++.++..|+.
T Consensus 19 ~~~C~IC~~---~~~~p~~~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~--Cr~~~~~~~~~~n~~l~~ 82 (85)
T 2ecv_A 19 EVTCPICLE---LLTQPLSL-DCGHSFCQACLTANHKKSMLDKGESSCPV--CRISYQPENIRPNRHVAN 82 (85)
T ss_dssp CCCCTTTCS---CCSSCBCC-SSSCCBCTTHHHHHHHHHHHTTSCCCCTT--TCCSSCSSSCCCSCCCCC
T ss_pred CCCCCCCCc---ccCCceeC-CCCCHHHHHHHHHHHHHhhcCCCCCcCCC--CCCccCHHhcCccHHHHH
Confidence 678999985 46899985 79999999999999973 245789999 999999999998877653
No 27
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.02 E-value=3.5e-06 Score=59.87 Aligned_cols=53 Identities=17% Similarity=0.300 Sum_probs=45.1
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKC 215 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL 215 (253)
.+.|||.+. .+.+|+.- .|||+|-+.-|..|++.......||+ |...++.+++
T Consensus 20 ~~~C~IC~~---~~~~~~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~--Cr~~~~~~~~ 72 (73)
T 2ysl_A 20 EVICPICLD---ILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPL--CKTSVRKNAI 72 (73)
T ss_dssp CCBCTTTCS---BCSSEEEC-TTCCEEEHHHHHHHCSSSCSCCCCSS--SCCCCCCCCC
T ss_pred CCEeccCCc---ccCCeEEc-CCCChhhHHHHHHHHHcCCCCCCCCC--CCCcCCcccC
Confidence 678999985 46899986 79999999999999974356789999 9998888775
No 28
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.02 E-value=3.8e-06 Score=60.55 Aligned_cols=47 Identities=11% Similarity=0.088 Sum_probs=39.6
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLY 209 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~ 209 (253)
.+.|||.+. .|.+||.-..|||+|-+.-|..+++ .++...||+ |...
T Consensus 15 ~~~C~IC~~---~~~~p~~~~~CgH~fC~~Ci~~~~~-~~~~~~CP~--Cr~~ 61 (74)
T 2yur_A 15 ELLCLICKD---IMTDAVVIPCCGNSYCDECIRTALL-ESDEHTCPT--CHQN 61 (74)
T ss_dssp GGSCSSSCC---CCTTCEECSSSCCEECTTHHHHHHH-HSSSSCCSS--SCCS
T ss_pred CCCCcCCCh---HHhCCeEcCCCCCHHHHHHHHHHHH-hcCCCcCCC--CCCc
Confidence 688999984 4699999655999999999999998 334578999 9884
No 29
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.02 E-value=3.7e-06 Score=60.12 Aligned_cols=53 Identities=13% Similarity=0.257 Sum_probs=45.5
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVF 217 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~ 217 (253)
.+.|||.+. .+.+|+.-..|||+|-+.-|..+++. ...||+ |...+...++..
T Consensus 15 ~~~C~IC~~---~~~~p~~~~~CgH~fC~~Ci~~~~~~---~~~CP~--Cr~~~~~~~~~~ 67 (72)
T 2djb_A 15 YILCSICKG---YLIDATTITECLHTFCKSCIVRHFYY---SNRCPK--CNIVVHQTQPLS 67 (72)
T ss_dssp GGSCTTTSS---CCSSCEECSSSCCEECHHHHHHHHHH---CSSCTT--TCCCCCSSCSCC
T ss_pred CCCCCCCCh---HHHCcCEECCCCCHHHHHHHHHHHHc---CCcCCC--cCcccCcccccc
Confidence 678999985 46899987789999999999999972 568999 999998887764
No 30
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.94 E-value=5.1e-06 Score=58.11 Aligned_cols=55 Identities=9% Similarity=0.037 Sum_probs=44.5
Q ss_pred cccCCCCccccccccCCcc---cCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccc
Q 025405 157 NISCPLSGKPITELAEPVR---RYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVF 217 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~---s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~ 217 (253)
.+.|||.+.. .+.+|+. ...|||+|-+.-|.+++. ++...||+ |...++.+++.+
T Consensus 3 ~~~C~IC~~~--~~~~~~~~~~~~~CgH~fC~~Ci~~~~~--~~~~~CP~--Cr~~~~~~~~~~ 60 (65)
T 1g25_A 3 DQGCPRCKTT--KYRNPSLKLMVNVCGHTLCESCVDLLFV--RGAGNCPE--CGTPLRKSNFRV 60 (65)
T ss_dssp TTCCSTTTTH--HHHCSSCCEEECTTCCCEEHHHHHHHHH--TTSSSCTT--TCCCCSSCCCEE
T ss_pred CCcCCcCCCC--ccCCCccCeecCCCCCHhHHHHHHHHHH--cCCCcCCC--CCCcccccccee
Confidence 5679999841 4688963 467999999999999986 34678998 999999888865
No 31
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=97.94 E-value=2.8e-06 Score=70.34 Aligned_cols=69 Identities=13% Similarity=0.050 Sum_probs=57.2
Q ss_pred ccccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHHHHhhc
Q 025405 156 LNISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFMQVLE 232 (253)
Q Consensus 156 ~n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~~~~~ 232 (253)
-.+.|||.+. .|.+||.. .|||+|-+.-|..+++. +...||+ |...|+.+++.+|..+++.+.-+++-=
T Consensus 17 ~~~~C~IC~~---~~~~pv~~-~CgH~fC~~Ci~~~~~~--~~~~CP~--Cr~~~~~~~~~~~~~~~~~i~~l~v~C 85 (170)
T 3hcs_A 17 SKYECPICLM---ALREAVQT-PCGHRFCKACIIKSIRD--AGHKCPV--DNEILLENQLFPDNFAKREILSLMVKC 85 (170)
T ss_dssp GGGBCTTTCS---BCSSEEEC-TTSCEEEHHHHHHHHHH--HCSBCTT--TCCBCCGGGCEECHHHHHHHHTSEEEC
T ss_pred CCCCCCCCCh---hhcCcEEC-CCCCHHHHHHHHHHHHh--CCCCCCC--CccCcchhhhhhhHHHHHHHhhcccCC
Confidence 3789999995 46999995 79999999999999972 2348998 999999999999999988776555443
No 32
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=97.87 E-value=3.4e-06 Score=68.76 Aligned_cols=67 Identities=13% Similarity=0.164 Sum_probs=53.4
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccc---------cccCcccccHhHhhHhHH
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLY---------FNWKKCVFKYHLKGHMLF 227 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~---------l~~~dL~~D~~l~~~~~~ 227 (253)
.+.|||.+. .|.+||. ..|||+|-+..|..+++ .+...||+ |... +..+++.+|..+++.+.-
T Consensus 31 ~~~C~IC~~---~~~~pv~-~~CgH~FC~~Ci~~~~~--~~~~~CP~--Cr~~~~~~~~~~~l~~~~~~~d~~~~~~i~~ 102 (141)
T 3knv_A 31 KYLCSACRN---VLRRPFQ-AQCGHRYCSFCLASILS--SGPQNCAA--CVHEGIYEEGISILESSSAFPDNAARREVES 102 (141)
T ss_dssp GGBCTTTCS---BCSSEEE-CTTSCEEEHHHHHHHGG--GSCEECHH--HHHTTCCCTTTTEECGGGCEECHHHHHHHHT
T ss_pred CcCCCCCCh---hhcCcEE-CCCCCccCHHHHHHHHh--cCCCCCCC--CCCcccccccccccchhhhcccHHHHHHHcc
Confidence 789999994 5799998 57999999999999997 34568999 8774 445677799998887765
Q ss_pred HHhh
Q 025405 228 MQVL 231 (253)
Q Consensus 228 ~~~~ 231 (253)
+++-
T Consensus 103 L~v~ 106 (141)
T 3knv_A 103 LPAV 106 (141)
T ss_dssp SEEE
T ss_pred cccc
Confidence 5443
No 33
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=97.85 E-value=7.8e-06 Score=63.53 Aligned_cols=66 Identities=18% Similarity=0.223 Sum_probs=51.4
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCccc-ccHhHhhHhHHHHh
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCV-FKYHLKGHMLFMQV 230 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~-~D~~l~~~~~~~~~ 230 (253)
.+.|||.+. .+.+||. ..|||+|-+.-|..++.. ....||+ |...+...++. ++..+.+.+.-+++
T Consensus 23 ~~~C~IC~~---~~~~p~~-~~CgH~fC~~Ci~~~~~~--~~~~CP~--Cr~~~~~~~~~~~~~~l~~~i~~l~v 89 (116)
T 1rmd_A 23 SISCQICEH---ILADPVE-TSCKHLFCRICILRCLKV--MGSYCPS--CRYPCFPTDLESPVKSFLNILNSLMV 89 (116)
T ss_dssp HTBCTTTCS---BCSSEEE-CTTSCEEEHHHHHHHHHH--TCSBCTT--TCCBCCGGGCBCCCHHHHHHHHHCEE
T ss_pred CCCCCCCCc---HhcCcEE-cCCCCcccHHHHHHHHhH--CcCcCCC--CCCCCCHhhccccHHHHHHHHHHhcC
Confidence 678999985 4699998 579999999999999972 2468999 99999988876 44555555444433
No 34
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=97.72 E-value=2.3e-05 Score=60.77 Aligned_cols=62 Identities=15% Similarity=0.156 Sum_probs=50.4
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCcccccccccccc-------CcccccHhHhhHhH
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW-------KKCVFKYHLKGHML 226 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~-------~dL~~D~~l~~~~~ 226 (253)
.+.|||.+. .+.+||.- .|||+|-+..|..++. .+...||+ |...+.. .++..|..|...+.
T Consensus 15 ~~~C~iC~~---~~~~p~~~-~CgH~fC~~Ci~~~~~--~~~~~CP~--Cr~~~~~~~~~~~~~~~~~n~~l~~~i~ 83 (115)
T 3l11_A 15 ECQCGICME---ILVEPVTL-PCNHTLCKPCFQSTVE--KASLCCPF--CRRRVSSWTRYHTRRNSLVNVELWTIIQ 83 (115)
T ss_dssp HHBCTTTCS---BCSSCEEC-TTSCEECHHHHCCCCC--TTTSBCTT--TCCBCHHHHHHHHHTTCCBCHHHHHHHH
T ss_pred CCCCccCCc---ccCceeEc-CCCCHHhHHHHHHHHh--HCcCCCCC--CCcccCccccccccccchhhHHHHHHHH
Confidence 688999994 46999985 7999999999999996 44578998 9997763 67777777776654
No 35
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.69 E-value=1.4e-05 Score=58.52 Aligned_cols=53 Identities=15% Similarity=0.200 Sum_probs=43.1
Q ss_pred cccCCCCccccccccC----CcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcc
Q 025405 157 NISCPLSGKPITELAE----PVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKC 215 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~----Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL 215 (253)
.+.|||.+.. +.+ |+.- .|||+|-+.-|..|++.......||+ |...+...++
T Consensus 15 ~~~C~IC~~~---~~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~--Cr~~~~~~~i 71 (88)
T 2ct2_A 15 VLECPICMES---FTEEQLRPKLL-HCGHTICRQCLEKLLASSINGVRCPF--CSKITRITSL 71 (88)
T ss_dssp CCBCTTTCCB---CCTTSSCEEEC-SSSCEEEHHHHHHHHHHCSSCBCCTT--TCCCBCCSST
T ss_pred CCCCccCCcc---ccccCCCeEEC-CCCChhhHHHHHHHHHcCCCCcCCCC--CCCcccchhH
Confidence 5779999854 577 8775 69999999999999984445689999 9998877654
No 36
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=97.63 E-value=1.5e-05 Score=56.17 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=43.1
Q ss_pred cccCCCCccccccccCCc------ccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccc
Q 025405 157 NISCPLSGKPITELAEPV------RRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVF 217 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv------~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~ 217 (253)
.+.|||-+.+ +.+|+ ....|||+|-+.-|..|++. ...||+ |...+..+++.+
T Consensus 10 ~~~C~IC~~~---~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~--Cr~~~~~~~~~~ 68 (71)
T 3ng2_A 10 TVSCPICMDG---YSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPT--CRKKINHKRYHP 68 (71)
T ss_dssp CCBCTTTCCB---HHHHHTTTCCEEECTTSCEEEHHHHHHHHHH---CSBCTT--TCCBCCCCSCCC
T ss_pred CCCCcccChh---hhccccccCCeEeCCCCChHhHHHHHHHHHc---CCCCCC--CCCccChhheee
Confidence 6789999854 57773 45689999999999999972 258999 999998888764
No 37
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.62 E-value=3.6e-05 Score=53.26 Aligned_cols=43 Identities=19% Similarity=0.322 Sum_probs=36.5
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNH 203 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv 203 (253)
.+.|||-+. .+.+||.- .|||+|-+.-|..+++......+||+
T Consensus 20 ~~~C~IC~~---~~~~p~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~ 62 (63)
T 2ysj_A 20 EVICPICLD---ILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPL 62 (63)
T ss_dssp CCBCTTTCS---BCSSCEEC-TTSSEECHHHHHHHHHHCSSCCCCSC
T ss_pred CCCCCcCCc---hhCCeEEe-CCCCcchHHHHHHHHHcCCCCCcCcC
Confidence 688999985 46899985 79999999999999974445678997
No 38
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=97.58 E-value=1.3e-05 Score=55.17 Aligned_cols=53 Identities=17% Similarity=0.209 Sum_probs=42.5
Q ss_pred cccCCCCccccccccCCc------ccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccc
Q 025405 157 NISCPLSGKPITELAEPV------RRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVF 217 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv------~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~ 217 (253)
++.|||.+.. +.+|+ ....|||+|-+.-|..|++. +..||+ |...+..+++.+
T Consensus 3 ~~~C~IC~~~---~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~--Cr~~~~~~~~~~ 61 (64)
T 2xeu_A 3 MVSCPICMDG---YSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPT--CRKKINHKRYHP 61 (64)
T ss_dssp CCBCTTTCCB---HHHHHHTTCCEEEETTSCEEEHHHHHHHHHH---CSBCTT--TCCBCTTTCEEE
T ss_pred CCCCCccChh---hhCccccCCCEEeCCCCCchhHHHHHHHHHc---CCCCCC--CCccCCccceee
Confidence 5789999854 57663 44679999999999999972 468999 999888877654
No 39
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=97.55 E-value=3.7e-05 Score=61.78 Aligned_cols=47 Identities=11% Similarity=0.239 Sum_probs=38.7
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCcccccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW 212 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~ 212 (253)
.+.|||.+. .|.+||.- .|||+|-+..|..|+. ....||+ |...|..
T Consensus 53 ~~~C~iC~~---~~~~~~~~-~CgH~fc~~Ci~~~~~---~~~~CP~--Cr~~~~~ 99 (138)
T 4ayc_A 53 ELQCIICSE---YFIEAVTL-NCAHSFCSYCINEWMK---RKIECPI--CRKDIKS 99 (138)
T ss_dssp HSBCTTTCS---BCSSEEEE-TTSCEEEHHHHHHHTT---TCSBCTT--TCCBCCC
T ss_pred cCCCcccCc---ccCCceEC-CCCCCccHHHHHHHHH---cCCcCCC--CCCcCCC
Confidence 467999985 46999985 6999999999999997 3467999 9887653
No 40
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.54 E-value=2.7e-05 Score=55.34 Aligned_cols=51 Identities=12% Similarity=0.096 Sum_probs=42.0
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCV 216 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~ 216 (253)
.+.|||-+. .+.+||.- .|||+|-+.-|..|+. ....||+ |...|...++.
T Consensus 15 ~~~C~IC~~---~~~~~~~~-~CgH~fC~~Ci~~~~~---~~~~CP~--Cr~~~~~~~~~ 65 (71)
T 2d8t_A 15 VPECAICLQ---TCVHPVSL-PCKHVFCYLCVKGASW---LGKRCAL--CRQEIPEDFLD 65 (71)
T ss_dssp CCBCSSSSS---BCSSEEEE-TTTEEEEHHHHHHCTT---CSSBCSS--SCCBCCHHHHS
T ss_pred CCCCccCCc---ccCCCEEc-cCCCHHHHHHHHHHHH---CCCcCcC--cCchhCHhhcc
Confidence 578999984 56999886 5999999999999997 2378999 99888766543
No 41
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.52 E-value=3.1e-05 Score=58.17 Aligned_cols=57 Identities=14% Similarity=0.122 Sum_probs=43.7
Q ss_pred cccCCCCccccccccCCccc--CCCCcccchhhHhhhhhcC---C--CCCCccccccccc--cccCccc
Q 025405 157 NISCPLSGKPITELAEPVRR--YQILQIYPRFSFLPFCSLD---C--YFPRCNHFGCQLY--FNWKKCV 216 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s--~~CgHvYek~aI~~~i~~~---~--~~~~CPv~GC~~~--l~~~dL~ 216 (253)
.+.|||-+. .+..|+.- ..|||.|-++-|.+|+... + ...+||..||... +..+++.
T Consensus 5 ~~~C~IC~~---~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~ 70 (94)
T 1wim_A 5 SSGCKLCLG---EYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIE 70 (94)
T ss_dssp BCCCSSSCC---CCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHH
T ss_pred CcCCcccCc---ccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHH
Confidence 678999984 45777653 2599999999999999632 1 3579999999998 7765544
No 42
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.48 E-value=0.00011 Score=49.64 Aligned_cols=43 Identities=16% Similarity=0.084 Sum_probs=35.6
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNH 203 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv 203 (253)
.+.|||-+. .+.+|+. ..|||+|-+.-|..|+........||+
T Consensus 15 ~~~C~IC~~---~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~ 57 (58)
T 2ecj_A 15 EASCSVCLE---YLKEPVI-IECGHNFCKACITRWWEDLERDFPCPV 57 (58)
T ss_dssp CCBCSSSCC---BCSSCCC-CSSCCCCCHHHHHHHTTSSCCSCCCSC
T ss_pred CCCCccCCc---ccCccEe-CCCCCccCHHHHHHHHHhcCCCCCCCC
Confidence 678999985 4699998 569999999999999863346788997
No 43
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.39 E-value=0.00012 Score=52.62 Aligned_cols=55 Identities=13% Similarity=0.306 Sum_probs=43.4
Q ss_pred cccCCCCccccccccCCc--ccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccccH
Q 025405 157 NISCPLSGKPITELAEPV--RRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKY 219 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv--~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~ 219 (253)
.+.|||.+.. |.+|. +-..|||+|-+.-|..|++ ....||+ |...+...++.+.+
T Consensus 15 ~~~C~IC~~~---~~~~~~~~~~~C~H~fc~~Ci~~~~~---~~~~CP~--Cr~~~~~~~~~~~~ 71 (78)
T 2ect_A 15 GLECPVCKED---YALGESVRQLPCNHLFHDSCIVPWLE---QHDSCPV--CRKSLTGQNTATNP 71 (78)
T ss_dssp SCCCTTTTSC---CCTTSCEEECTTSCEEETTTTHHHHT---TTCSCTT--TCCCCCCSCSCCCC
T ss_pred CCCCeeCCcc---ccCCCCEEEeCCCCeecHHHHHHHHH---cCCcCcC--cCCccCCcccCCCC
Confidence 5779999854 46553 3346999999999999997 2368999 99999988887653
No 44
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=97.35 E-value=0.00011 Score=76.38 Aligned_cols=62 Identities=13% Similarity=0.002 Sum_probs=51.7
Q ss_pred cccCCCCccccccccCCcccCCCC-cccchhhHhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHH
Q 025405 157 NISCPLSGKPITELAEPVRRYQIL-QIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLF 227 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~Cg-HvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~ 227 (253)
.|.||||+ ..|.+||.-. -| ++|||.+|..||. + ...||+.+ ..|+..+|+|+..||+++.-
T Consensus 891 ~F~cPIs~---~lM~DPVilp-sG~~TydR~~I~~wl~-~--~~tdP~Tr--~~L~~~~liPN~~Lk~~I~~ 953 (968)
T 3m62_A 891 EFLDPLMY---TIMKDPVILP-ASKMNIDRSTIKAHLL-S--DSTDPFNR--MPLKLEDVTPNEELRQKILC 953 (968)
T ss_dssp GGBCTTTC---SBCSSEEECT-TTCCEEEHHHHHHHHT-T--CCBCTTTC--CBCCGGGCEECHHHHHHHHH
T ss_pred HhCCcchh---hHHhCCeEcC-CCCEEECHHHHHHHHh-c--CCCCCCCC--CCCCcccccccHHHHHHHHH
Confidence 78899999 4589999954 45 7999999999997 2 34799944 67889999999999998853
No 45
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=97.34 E-value=6.7e-05 Score=52.45 Aligned_cols=47 Identities=13% Similarity=0.287 Sum_probs=38.4
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
+..|||-+. .+.+|+.-..|||+|-+..|..|++. +..||+ |...+.
T Consensus 5 ~~~C~IC~~---~~~~~~~~~~C~H~fc~~Ci~~~~~~---~~~CP~--Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLE---DPSNYSMALPCLHAFCYVCITRWIRQ---NPTCPL--CKVPVE 51 (68)
T ss_dssp CCCCSSCCS---CCCSCEEETTTTEEESTTHHHHHHHH---SCSTTT--TCCCCC
T ss_pred CCCCeeCCc---cccCCcEecCCCCeeHHHHHHHHHhC---cCcCcC--CChhhH
Confidence 567999985 46888766789999999999999972 358999 887654
No 46
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.27 E-value=6.3e-05 Score=58.47 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=42.7
Q ss_pred cccCCCCccccccccCCc------ccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccc
Q 025405 157 NISCPLSGKPITELAEPV------RRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVF 217 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv------~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~ 217 (253)
.+.|||-+. .+.+|+ ....|||+|-+.-|.+|++ .+..||+ |...+...++.+
T Consensus 7 ~~~C~IC~~---~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~---~~~~CP~--Cr~~~~~~~l~~ 65 (133)
T 4ap4_A 7 TVSCPICMD---GYSEIVQNGRLIVSTECGHVFCSQCLRDSLK---NANTCPT--CRKKINHKRYHP 65 (133)
T ss_dssp SCBCTTTCC---BHHHHHHTTCCEEEETTCCEEEHHHHHHHHT---TCSBCTT--TCCBCTTTCEEE
T ss_pred CCCCcccCh---hhhCccccccCeEecCCCChhhHHHHHHHHH---hCCCCCC--CCCcCccccccc
Confidence 688999984 468883 4568999999999999997 2358999 999888776643
No 47
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=97.14 E-value=0.00042 Score=46.29 Aligned_cols=50 Identities=10% Similarity=0.101 Sum_probs=36.8
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
+..|||-+..+..-..|+.-..|||+|-+.-|.+|++ .+..||+ |...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~---~~~~CP~--Cr~~~~ 54 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLG---SHSTCPL--CRLTVV 54 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTT---TCCSCSS--SCCCSC
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHH---cCCcCcC--CCCEeE
Confidence 4679999865422222666557999999999999997 2457999 877553
No 48
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.06 E-value=0.00016 Score=50.20 Aligned_cols=48 Identities=17% Similarity=0.252 Sum_probs=37.3
Q ss_pred cccCCCCccccccccCCc------ccCCCCcccchhhHhhhhhcCCCCCCcccccccccccc
Q 025405 157 NISCPLSGKPITELAEPV------RRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW 212 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv------~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~ 212 (253)
.+.|||.+.. +.+|+ .-..|||+|-+.-|..|++. ...||+ |...|+.
T Consensus 15 ~~~C~IC~~~---~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~--Cr~~~~~ 68 (69)
T 2ea6_A 15 TVSCPICMDG---YSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPT--CRKKINH 68 (69)
T ss_dssp CCCCTTTCCC---HHHHTTTTCCEEECSSSCEEEHHHHHHHHHH---CSSCTT--TCCCCCC
T ss_pred CCCCcccCcc---ccccccccCCeEeCCCCChhcHHHHHHHHHc---CCCCCC--CCCccCc
Confidence 6779999854 56662 34579999999999999972 458999 8876653
No 49
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=97.04 E-value=0.00051 Score=45.75 Aligned_cols=49 Identities=14% Similarity=0.167 Sum_probs=36.6
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCcccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYF 210 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l 210 (253)
+..|||.+..+..-.++++-..|||+|-+.-|..|++.+ ..||+ |...|
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~--Cr~~~ 53 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG---YRCPL--CSGPS 53 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT---CCCTT--SCCSS
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC---CcCCC--CCCcC
Confidence 577999986542222356667799999999999999832 78998 77654
No 50
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.52 E-value=0.00081 Score=47.95 Aligned_cols=48 Identities=8% Similarity=0.038 Sum_probs=36.8
Q ss_pred cccCCCCccccccccCC--cccCCCCcccchhhHhhhhhcCCCCCCcccccccccccc
Q 025405 157 NISCPLSGKPITELAEP--VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW 212 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~P--v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~ 212 (253)
...|||-+.. +.+| ++...|||+|-+.-|..|++. ...||+ |.+.+..
T Consensus 23 ~~~C~IC~~~---~~~~~~~~~l~C~H~fh~~Ci~~w~~~---~~~CP~--Cr~~~~~ 72 (75)
T 1x4j_A 23 QTLCVVCMCD---FESRQLLRVLPCNHEFHAKCVDKWLKA---NRTCPI--CRADSGP 72 (75)
T ss_dssp CCEETTTTEE---CCBTCEEEEETTTEEEETTHHHHHHHH---CSSCTT--TCCCCCC
T ss_pred CCCCeECCcc---cCCCCeEEEECCCCHhHHHHHHHHHHc---CCcCcC--cCCcCCC
Confidence 4569999854 4555 455669999999999999972 357999 8876654
No 51
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.46 E-value=0.0015 Score=46.28 Aligned_cols=47 Identities=9% Similarity=0.171 Sum_probs=35.8
Q ss_pred cccCCCCccccccccCCccc--CCCCcccchhhHhhhhhcCCCCCCccccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRR--YQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s--~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
...|||-+.. +.+|..- ..|||+|-+.-|.+|++. ...||+ |...|.
T Consensus 15 ~~~C~IC~~~---~~~~~~~~~~~C~H~f~~~Ci~~~~~~---~~~CP~--Cr~~~~ 63 (74)
T 2ep4_A 15 HELCAVCLED---FKPRDELGICPCKHAFHRKCLIKWLEV---RKVCPL--CNMPVL 63 (74)
T ss_dssp SCBCSSSCCB---CCSSSCEEEETTTEEEEHHHHHHHHHH---CSBCTT--TCCBCS
T ss_pred CCCCcCCCcc---cCCCCcEEEcCCCCEecHHHHHHHHHc---CCcCCC--cCcccc
Confidence 5679999854 5666543 269999999999999972 238999 888543
No 52
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.43 E-value=0.0021 Score=43.73 Aligned_cols=45 Identities=16% Similarity=0.122 Sum_probs=35.7
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccC
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWK 213 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~ 213 (253)
.+.|||-+. .+.+|+. ..|||+|-+.-|.. ....||+ |.+.+...
T Consensus 6 ~~~C~IC~~---~~~~p~~-l~CgH~fC~~Ci~~------~~~~CP~--Cr~~~~~~ 50 (56)
T 1bor_A 6 FLRCQQCQA---EAKCPKL-LPCLHTLCSGCLEA------SGMQCPI--CQAPWPLG 50 (56)
T ss_dssp CSSCSSSCS---SCBCCSC-STTSCCSBTTTCSS------SSSSCSS--CCSSSSCC
T ss_pred CCCceEeCC---ccCCeEE-cCCCCcccHHHHcc------CCCCCCc--CCcEeecC
Confidence 678999985 4689987 46999999998866 3568999 88876654
No 53
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=96.40 E-value=0.002 Score=44.98 Aligned_cols=50 Identities=16% Similarity=0.349 Sum_probs=36.7
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCcccccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW 212 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~ 212 (253)
...|||-+..+.. .++++...|||+|-+.-|..|++. ...||+ |...|..
T Consensus 14 ~~~C~IC~~~~~~-~~~~~~~~C~H~fc~~Ci~~~~~~---~~~CP~--Cr~~~~~ 63 (69)
T 2kiz_A 14 EEKCTICLSILEE-GEDVRRLPCMHLFHQVCVDQWLIT---NKKCPI--CRVDIEA 63 (69)
T ss_dssp CCSBTTTTBCCCS-SSCEEECTTSCEEEHHHHHHHHHH---CSBCTT--TCSBSCS
T ss_pred CCCCeeCCccccC-CCcEEEeCCCCHHHHHHHHHHHHc---CCCCcC--cCccccC
Confidence 5679999865421 234555679999999999999972 246999 9886654
No 54
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.38 E-value=0.0014 Score=45.84 Aligned_cols=48 Identities=10% Similarity=0.175 Sum_probs=38.3
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKK 214 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~d 214 (253)
.+.|||-+.. +.+ +. ..|||+|-+.-|..|++ ....||+ |...+...+
T Consensus 15 ~~~C~IC~~~---~~~-~~-~~CgH~fc~~Ci~~~~~---~~~~CP~--Cr~~~~~~~ 62 (70)
T 2ecn_A 15 EEECCICMDG---RAD-LI-LPCAHSFCQKCIDKWSD---RHRNCPI--CRLQMTGAN 62 (70)
T ss_dssp CCCCSSSCCS---CCS-EE-ETTTEEECHHHHHHSSC---CCSSCHH--HHHCTTCCC
T ss_pred CCCCeeCCcC---ccC-cc-cCCCCcccHHHHHHHHH---CcCcCCC--cCCcccCCC
Confidence 6789999854 456 44 57999999999999997 4678999 988776554
No 55
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.31 E-value=0.0022 Score=46.83 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=29.6
Q ss_pred CcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcc
Q 025405 173 PVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKC 215 (253)
Q Consensus 173 Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL 215 (253)
++.-..|||+|-+.-|.++++ . +..||+ |...+...++
T Consensus 42 ~~~~~~C~H~FH~~Ci~~Wl~-~--~~~CP~--CR~~~~~~~~ 79 (81)
T 2ecl_A 42 VVVWGECNHSFHNCCMSLWVK-Q--NNRCPL--CQQDWVVQRI 79 (81)
T ss_dssp CEEEETTSCEEEHHHHHHHTT-T--CCBCTT--TCCBCCEEEE
T ss_pred EEEeCCCCCccChHHHHHHHH-h--CCCCCC--cCCCcchhhc
Confidence 455557999999999999997 2 248999 9987765543
No 56
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=96.30 E-value=0.00077 Score=52.20 Aligned_cols=53 Identities=17% Similarity=0.258 Sum_probs=42.5
Q ss_pred cccCCCCccccccccCCc------ccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccc
Q 025405 157 NISCPLSGKPITELAEPV------RRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVF 217 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv------~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~ 217 (253)
.+.|||-+.. +.+|+ ....|||+|-..-|..+++ . ...||+ |...+..+++.+
T Consensus 72 ~~~C~iC~~~---~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~-~--~~~CP~--Cr~~~~~~~~~~ 130 (133)
T 4ap4_A 72 TVSCPICMDG---YSEIVQNGRLIVSTECGHVFCSQCLRDSLK-N--ANTCPT--CRKKINHKRYHP 130 (133)
T ss_dssp SCBCTTTCCB---HHHHHHTTCCEEEETTSBEEEHHHHHHHHH-H--CSBCTT--TCCBCCGGGEEE
T ss_pred CCCCCCCCCc---cccccccCcceEeCCCCChhhHHHHHHHHH-c--CCCCCC--CCCcCChhccee
Confidence 6789999854 56662 4457999999999999997 2 358999 999998888764
No 57
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=96.17 E-value=0.0028 Score=48.51 Aligned_cols=50 Identities=14% Similarity=0.237 Sum_probs=37.0
Q ss_pred cccCCCCccccccccCCc-----------------ccCCCCcccchhhHhhhhhcC--CCCCCccccccccccc
Q 025405 157 NISCPLSGKPITELAEPV-----------------RRYQILQIYPRFSFLPFCSLD--CYFPRCNHFGCQLYFN 211 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv-----------------~s~~CgHvYek~aI~~~i~~~--~~~~~CPv~GC~~~l~ 211 (253)
+..|||.+.+ |.+|+ +-..|||+|-+..|..|+... .....||+ |...+.
T Consensus 25 ~~~C~ICl~~---~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~--CR~~~~ 93 (114)
T 1v87_A 25 EEDCIICMEK---LAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPS--CKTIYG 93 (114)
T ss_dssp SCEETTTTEE---TTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTT--TCCBSS
T ss_pred CCcCccCChh---hcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCC--CCCccC
Confidence 3469999854 56654 145799999999999999522 34678999 998654
No 58
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=96.12 E-value=0.0073 Score=44.24 Aligned_cols=55 Identities=18% Similarity=0.240 Sum_probs=39.8
Q ss_pred cccCCCCccccccccCCccc-CCCCcccchhhHhhhhhcCCCCCCccccccccccccCccc
Q 025405 157 NISCPLSGKPITELAEPVRR-YQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCV 216 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s-~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~ 216 (253)
.+.|||-+.|+ .+.+|+.- -.|||.|-+.-|..+.. .....||+ |.+.+....+.
T Consensus 11 ~~~CpICle~~-~~~d~~~~p~~CGH~fC~~Cl~~~~~--~~~~~CP~--CR~~~~~~~~~ 66 (78)
T 1e4u_A 11 PVECPLCMEPL-EIDDINFFPCTCGYQICRFCWHRIRT--DENGLCPA--CRKPYPEDPAV 66 (78)
T ss_dssp CCBCTTTCCBC-CTTTTTCCSSTTSCCCCHHHHHHHTT--SSCSBCTT--TCCBCSSCSSC
T ss_pred CCcCCccCccC-ccccccccccCCCCCcCHHHHHHHHh--cCCCCCCC--CCCccCCCchh
Confidence 56799998654 22233221 13999999999999986 35678999 99988776664
No 59
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=96.10 E-value=0.0025 Score=47.41 Aligned_cols=47 Identities=11% Similarity=0.282 Sum_probs=35.1
Q ss_pred cccCCCCccccccccC--CcccCCCCcccchhhHhhhhhcCCCCCCccccccccccc
Q 025405 157 NISCPLSGKPITELAE--PVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~--Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
+..|||.+..+ .+ +++...|||+|-+..|..|++ ....||+ |...+.
T Consensus 40 ~~~C~IC~~~~---~~~~~~~~l~C~H~Fh~~Ci~~wl~---~~~~CP~--Cr~~~~ 88 (91)
T 2l0b_A 40 EMCCPICCSEY---VKGDVATELPCHHYFHKPCVSIWLQ---KSGTCPV--CRCMFP 88 (91)
T ss_dssp CSEETTTTEEC---CTTCEEEEETTTEEEEHHHHHHHHT---TTCBCTT--TCCBSS
T ss_pred CCCCcccChhh---cCCCcEEecCCCChHHHHHHHHHHH---cCCcCcC--cCccCC
Confidence 56799998543 43 233345999999999999997 2358999 887654
No 60
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=95.44 E-value=0.0055 Score=57.88 Aligned_cols=51 Identities=6% Similarity=-0.013 Sum_probs=40.9
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKC 215 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL 215 (253)
...|||.+. .+.+||. ..|||+|....|..++.+ ....||+ |...+....+
T Consensus 332 ~~~C~ICle---~~~~pv~-lpCGH~FC~~Ci~~wl~~--~~~~CP~--CR~~i~~~~~ 382 (389)
T 2y1n_A 332 FQLCKICAE---NDKDVKI-EPCGHLMCTSCLTSWQES--EGQGCPF--CRCEIKGTEP 382 (389)
T ss_dssp SSBCTTTSS---SBCCEEE-ETTCCEECHHHHHHHHHH--TCSBCTT--TCCBCCEEEE
T ss_pred CCCCCccCc---CCCCeEE-eCCCChhhHHHHHHHHhc--CCCCCCC--CCCccCCcee
Confidence 368999984 4689987 469999999999999972 4568999 9987766543
No 61
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=94.73 E-value=0.02 Score=44.30 Aligned_cols=34 Identities=6% Similarity=-0.045 Sum_probs=27.4
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCcccccccccccc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW 212 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~ 212 (253)
+.-..|||+|-...|..+|+ .+..||+ |...+..
T Consensus 68 ~~~~~C~H~FH~~Ci~~Wl~---~~~~CP~--Cr~~~~~ 101 (106)
T 3dpl_R 68 VAWGVCNHAFHFHCISRWLK---TRQVCPL--DNREWEF 101 (106)
T ss_dssp EEEETTSCEEEHHHHHHHHT---TCSBCSS--SCSBCCE
T ss_pred EeecccCcEECHHHHHHHHH---cCCcCcC--CCCccee
Confidence 55568999999999999997 2467998 9886543
No 62
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=93.37 E-value=0.041 Score=39.22 Aligned_cols=42 Identities=10% Similarity=0.067 Sum_probs=34.6
Q ss_pred cccCCCCccccccccCCcccCCCCcc-cchhhHhhhhhcCCCCCCccccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQI-YPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHv-Yek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
.+.|||-+ ..+.+||.- .|||+ |-+.-|..+ ..||+ |...++
T Consensus 24 ~~~C~iC~---~~~~~~~~~-pCgH~~~C~~C~~~~-------~~CP~--Cr~~i~ 66 (74)
T 4ic3_A 24 EKLCKICM---DRNIAIVFV-PCGHLVTCKQCAEAV-------DKCPM--CYTVIT 66 (74)
T ss_dssp HTBCTTTS---SSBCCEEEE-TTCCBCCCHHHHTTC-------SBCTT--TCCBCS
T ss_pred CCCCCCCC---CCCCCEEEc-CCCChhHHHHhhhcC-------ccCCC--cCcCcc
Confidence 57899998 457999975 69999 999998876 67999 888654
No 63
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.53 E-value=0.13 Score=37.37 Aligned_cols=48 Identities=15% Similarity=0.193 Sum_probs=37.0
Q ss_pred ccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccc
Q 025405 158 ISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 158 ~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
-.|+|....| ..=.++..|+|.|-+.-|..||+ ......||. |.+.+.
T Consensus 16 ~~C~IC~~~i---~~g~~C~~C~h~fH~~Ci~kWl~-~~~~~~CP~--Cr~~w~ 63 (74)
T 2ct0_A 16 KICNICHSLL---IQGQSCETCGIRMHLPCVAKYFQ-SNAEPRCPH--CNDYWP 63 (74)
T ss_dssp CBCSSSCCBC---SSSEECSSSCCEECHHHHHHHST-TCSSCCCTT--TCSCCC
T ss_pred CcCcchhhHc---ccCCccCCCCchhhHHHHHHHHH-hcCCCCCCC--CcCcCC
Confidence 3599998654 34467889999999999999998 333478998 887543
No 64
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.37 E-value=0.088 Score=37.42 Aligned_cols=43 Identities=9% Similarity=0.104 Sum_probs=33.8
Q ss_pred cccCCCCccccccccCCcccCCCCcc-cchhhHhhhhhcCCCCCCcccccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQI-YPRFSFLPFCSLDCYFPRCNHFGCQLYFNW 212 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHv-Yek~aI~~~i~~~~~~~~CPv~GC~~~l~~ 212 (253)
.+.|||-+. .+.+||. ..|||+ |-+.-+.. ...||+ |...+..
T Consensus 25 ~~~C~IC~~---~~~~~~~-~pCgH~~~C~~C~~~-------~~~CP~--Cr~~i~~ 68 (75)
T 2ecg_A 25 EKLCKICMD---RNIAIVF-VPCGHLVTCKQCAEA-------VDKCPM--CYTVITF 68 (75)
T ss_dssp HHSCSSSCS---SCCCBCC-SSSCCCCBCHHHHHH-------CSBCTT--TCCBCCC
T ss_pred CCCCCcCCC---CCCCEEE-ecCCCHHHHHHHhhC-------CCCCcc--CCceecC
Confidence 568999984 5699997 469999 99999843 257999 8886654
No 65
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=91.60 E-value=0.22 Score=43.57 Aligned_cols=65 Identities=12% Similarity=0.163 Sum_probs=43.6
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCcccccccccccc-----CcccccHhHhhHhHHHHhhccCCCeEEEecccCCcc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW-----KKCVFKYHLKGHMLFMQVLEYDGDIYLLGLASGTSL 248 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~-----~dL~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (253)
++|..|++.|+.+.+...+. .....+||. |+..++. .+-.|+..+.+....++. -|++|. .||||
T Consensus 122 ~~C~~C~~~~~~~~~~~~~~-~~~~p~C~~--Cgg~lrP~vv~FgE~lp~~~~~~a~~~~~~----adl~lv---iGTSl 191 (246)
T 1yc5_A 122 YYCVRCEKKYTVEDVIKKLE-SSDVPLCDD--CNSLIRPNIVFFGENLPQDALREAIGLSSR----ASLMIV---LGSSL 191 (246)
T ss_dssp EEETTTCCEEEHHHHHHHTT-TCSSCBCTT--TCCBEEEEECCBTSBCCHHHHHHHHHHHHH----CSEEEE---ESCCS
T ss_pred eEcCCCCCCCcHHHHHHHhc-cCCCCCCCC--CCCccCcceEECCCCCCHHHHHHHHHHHhc----CCEEEE---ECCCC
Confidence 56888999999998888775 334678996 8875543 455566666666655542 366554 45664
No 66
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=90.93 E-value=0.049 Score=43.08 Aligned_cols=35 Identities=6% Similarity=-0.037 Sum_probs=0.0
Q ss_pred CcccCCCCcccchhhHhhhhhcCCCCCCcccccccccccc
Q 025405 173 PVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW 212 (253)
Q Consensus 173 Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~ 212 (253)
|+.-..|+|+|-...|..+|+. +..||+ |...+..
T Consensus 78 ~v~~~~C~H~FH~~CI~~Wl~~---~~~CP~--Cr~~~~~ 112 (117)
T 4a0k_B 78 TVAWGVCNHAFHFHCISRWLKT---RQVCPL--DNREWEF 112 (117)
T ss_dssp ----------------------------------------
T ss_pred ccccCCcCceEcHHHHHHHHHc---CCcCCC--CCCeeee
Confidence 3333579999999999999972 457998 8875543
No 67
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=90.26 E-value=0.13 Score=40.13 Aligned_cols=29 Identities=17% Similarity=0.300 Sum_probs=22.2
Q ss_pred ccCCcccCCCCcccchhhHhhhhhcCCCCCCcccccccc
Q 025405 170 LAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQL 208 (253)
Q Consensus 170 l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~ 208 (253)
+..|.+|+.||++|. ...++..+||. |..
T Consensus 64 ~v~p~~C~~CG~~F~--------~~~~kPsrCP~--CkS 92 (105)
T 2gmg_A 64 LIKPAQCRKCGFVFK--------AEINIPSRCPK--CKS 92 (105)
T ss_dssp EECCCBBTTTCCBCC--------CCSSCCSSCSS--SCC
T ss_pred EEECcChhhCcCeec--------ccCCCCCCCcC--CCC
Confidence 577999999999992 11356789999 665
No 68
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=89.85 E-value=3.1 Score=33.92 Aligned_cols=83 Identities=20% Similarity=0.238 Sum_probs=56.9
Q ss_pred HHHhHhhhcccchhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHhhcCCCCCcc
Q 025405 16 IRNAATTLYNDNNTVIGEIRRALGMIKEIAVDLEKDNQSQMVKELEDATIQLMEAFGDCTHHSAAIQSVGNTYQPGTELT 95 (253)
Q Consensus 16 ~~~a~~~~~~~~~~~~~di~~a~~~ikevA~~lE~~~~~~~vkeLe~~v~eL~~~~~e~~~~~~Alq~l~~~yq~~~e~~ 95 (253)
|-+.=..+..+.+.+++.+..-=++|-++-.|...-+-.+.-++|+....++-.+..+++....-+.. +.+
T Consensus 12 ~~~~k~kL~~~sd~LvtkVDDLQD~VE~LRkDV~~RgvrP~~~ql~~v~kdi~~a~~eL~~m~~~i~~---------ekP 82 (141)
T 3okq_A 12 MEKSQTELGDLSDTLLSKVDDLQDVIEIMRKDVAERRSQPAKKKLETVSKDLENAQADVLKLQEFIDT---------EKP 82 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHH
T ss_pred HHHhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---------cCc
Confidence 33444556666677777777666666666666644444456778999999888877777777666644 346
Q ss_pred hHHHHHHHHHHh
Q 025405 96 DFKKLLVDEDAK 107 (253)
Q Consensus 96 df~k~~~~e~~~ 107 (253)
.|++.|+.++..
T Consensus 83 ~WKKiWE~EL~~ 94 (141)
T 3okq_A 83 HWKKTWEAELDK 94 (141)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 789999988864
No 69
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=89.82 E-value=0.39 Score=42.14 Aligned_cols=65 Identities=18% Similarity=0.323 Sum_probs=43.4
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCcccccccc-ccc-----cCcccccHhHhhHhHHHHhhccCCCeEEEecccCCc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQL-YFN-----WKKCVFKYHLKGHMLFMQVLEYDGDIYLLGLASGTS 247 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~-~l~-----~~dL~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (253)
++|..|++.|+.+.+...+. .....+||. |+. .++ ..+-.|+..+.+....++ .-|++|. .|||
T Consensus 124 ~~C~~C~~~~~~~~~~~~~~-~~~~p~C~~--Cgg~~lrP~Vv~FgE~lp~~~~~~a~~~~~----~adl~lv---iGTS 193 (253)
T 1ma3_A 124 LDCLDCHETYDWSEFVEDFN-KGEIPRCRK--CGSYYVKPRVVLFGEPLPQRTLFEAIEEAK----HCDAFMV---VGSS 193 (253)
T ss_dssp EEETTTCCEEEGGGTHHHHH-TTCCCCCTT--TCCSCEEEEECCBTSBCCHHHHHHHHHHHH----HCSEEEE---ESCC
T ss_pred eeeCCCCCcCcHHHHHHHhc-cCCCCCCCC--CCCccccceEEEeCCCCCHHHHHHHHHHHH----hCCEEEE---ECCC
Confidence 56888999999998888876 334578996 777 554 345556666666655554 2366554 4566
Q ss_pred c
Q 025405 248 L 248 (253)
Q Consensus 248 ~ 248 (253)
|
T Consensus 194 l 194 (253)
T 1ma3_A 194 L 194 (253)
T ss_dssp S
T ss_pred c
Confidence 4
No 70
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=87.83 E-value=0.24 Score=45.80 Aligned_cols=42 Identities=10% Similarity=0.109 Sum_probs=34.7
Q ss_pred cccCCCCccccccccCCcccCCCCcc-cchhhHhhhhhcCCCCCCccccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQI-YPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHv-Yek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
.+.|||.+ ..+.+||.- .|||+ |.+..|..+ ..||+ |...++
T Consensus 295 ~~~C~IC~---~~~~~~v~l-pCgH~~fC~~C~~~~-------~~CP~--CR~~i~ 337 (345)
T 3t6p_A 295 ERTCKVCM---DKEVSVVFI-PCGHLVVCQECAPSL-------RKCPI--CRGIIK 337 (345)
T ss_dssp TCBCTTTS---SSBCCEEEE-TTCCEEECTTTGGGC-------SBCTT--TCCBCC
T ss_pred CCCCCccC---CcCCceEEc-CCCChhHhHHHHhcC-------CcCCC--CCCCcc
Confidence 67899998 456999985 69999 999998866 57999 888654
No 71
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=86.70 E-value=0.37 Score=43.48 Aligned_cols=64 Identities=20% Similarity=0.197 Sum_probs=39.3
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCccccccccccccC-----cccccHhHhhHhHHHHhhccCCCeEEEecccCCcc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWK-----KCVFKYHLKGHMLFMQVLEYDGDIYLLGLASGTSL 248 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~-----dL~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (253)
++|..|++.|+.+.+..-+. .....+||. |...|+.+ +-.|+..+. + .+.++ .-|+.|+ .||||
T Consensus 140 ~~C~~C~~~~~~~~~~~~i~-~~~~P~C~~--Cgg~lrP~IV~FGE~lp~~~~~-~---~~~~~-~aDlllv---iGTSl 208 (285)
T 3glr_A 140 ATCTVCQRPFPGEDIRADVM-ADRVPRCPV--CTGVVKPDIVFFGEPLPQRFLL-H---VVDFP-MADLLLI---LGTSL 208 (285)
T ss_dssp EEETTTCCEEEGGGGHHHHH-TTCCCBCTT--TCCBEEEEECCTTSBCCGGGGG-H---HHHHH-HCSEEEE---ESCCC
T ss_pred EEECCCCCcCCHHHHHHHhh-cCCCCCCCC--CCCccCCcEEEeCCcCCHHHHH-H---HHHHh-cCCEEEE---eCCCC
Confidence 57889999999988776665 345678997 88755543 323443332 2 33333 3576554 46765
No 72
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=86.04 E-value=1.2 Score=39.81 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=26.6
Q ss_pred cccCCCCcccchhhHhhhhhcC--CCCCCccccccccccccC
Q 025405 174 VRRYQILQIYPRFSFLPFCSLD--CYFPRCNHFGCQLYFNWK 213 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~--~~~~~CPv~GC~~~l~~~ 213 (253)
++|..|++.|+.+.+..-+... ....+||. |...++.+
T Consensus 137 ~~C~~C~~~~~~~~~~~~~~~~~~~~~P~C~~--Cgg~lrP~ 176 (289)
T 1q1a_A 137 CHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDV--CGELVKPA 176 (289)
T ss_dssp EEETTTCCEECHHHHHHHHTCSSCCSCCBCTT--TCCBEEEE
T ss_pred eEECCCCCCCcHHHHHHHHhhccCCCCccCCC--CCCEECCC
Confidence 5688899999998887766411 23478996 88755433
No 73
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=84.75 E-value=0.48 Score=32.58 Aligned_cols=47 Identities=11% Similarity=0.026 Sum_probs=34.6
Q ss_pred cccCCCCccccccccCCcc-cCCCCcc-cchhhHhhhhhcCCCCCCccccccccccc
Q 025405 157 NISCPLSGKPITELAEPVR-RYQILQI-YPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~-s~~CgHv-Yek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
...|||.+. ...+|+. -.-|||. |-.+-+..+.+ . +.+||+ |.+.|.
T Consensus 7 ~~~C~IC~~---~~~~~~~~~~pCgH~~~C~~C~~~~~~-~--~~~CPi--CR~~i~ 55 (63)
T 2vje_B 7 LKPCSLCEK---RPRDGNIIHGRTGHLVTCFHCARRLKK-A--GASCPI--CKKEIQ 55 (63)
T ss_dssp GSBCTTTSS---SBSCEEEEETTEEEEEECHHHHHHHHH-T--TCBCTT--TCCBCC
T ss_pred CCCCcccCC---cCCCeEEEecCCCCHhHHHHHHHHHHH-h--CCcCCC--cCchhh
Confidence 456999973 3466653 2369998 99999999886 2 368999 888664
No 74
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=84.33 E-value=1.6 Score=39.75 Aligned_cols=65 Identities=18% Similarity=0.138 Sum_probs=41.2
Q ss_pred cccCC--CCcccchhhHhhhhhcCCCCCCcccccccccccc-----CcccccHhHhhHhHHHHhhccCCCeEEEecccCC
Q 025405 174 VRRYQ--ILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW-----KKCVFKYHLKGHMLFMQVLEYDGDIYLLGLASGT 246 (253)
Q Consensus 174 v~s~~--CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~-----~dL~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (253)
++|.. |++.|+.+.+...+. .....+||. |...++. .+-.|+..+.+...+ ++ .-|++|. .||
T Consensus 160 ~~C~~~~C~~~~~~~~~~~~i~-~~~~P~C~~--Cgg~lrP~VV~FGE~lp~~~~~~a~~~---~~-~aDlllv---iGT 229 (323)
T 1j8f_A 160 SHCVSASCRHEYPLSWMKEKIF-SEVTPKCED--CQSLVKPDIVFFGESLPARFFSCMQSD---FL-KVDLLLV---MGT 229 (323)
T ss_dssp EEESCTTTCCEECHHHHHHHHH-TTCCCBCTT--TCCBEEEEECCBTSCCCHHHHHHHHHG---GG-SCSEEEE---ESS
T ss_pred eecCCCccCccccHHHHHHhhc-cCCCCCCcC--CCCccCCCEEecCCcCCHHHHHHHHHH---Hh-CCCEEEE---Eee
Confidence 56888 999999888777665 334578996 8875543 344455555554443 33 4566654 455
Q ss_pred cc
Q 025405 247 SL 248 (253)
Q Consensus 247 ~~ 248 (253)
||
T Consensus 230 Sl 231 (323)
T 1j8f_A 230 SL 231 (323)
T ss_dssp CS
T ss_pred Cc
Confidence 54
No 75
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.00 E-value=0.78 Score=33.43 Aligned_cols=50 Identities=10% Similarity=0.134 Sum_probs=35.3
Q ss_pred ccCCCCccccccccCCcccCCCC-----cccchhhHhhhhhcCCCCCCcccccccccccc
Q 025405 158 ISCPLSGKPITELAEPVRRYQIL-----QIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW 212 (253)
Q Consensus 158 ~~CPlT~~~i~~l~~Pv~s~~Cg-----HvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~ 212 (253)
..|+|-+..+ .-.+|+.. -|+ |.|=++-|..||. .++...||+ |...+..
T Consensus 16 ~~C~IC~~~~-~~~~~l~~-pC~C~Gs~h~fH~~Cl~~Wl~-~~~~~~Cpl--Cr~~~~~ 70 (80)
T 2d8s_A 16 DICRICHCEG-DDESPLIT-PCHCTGSLHFVHQACLQQWIK-SSDTRCCEL--CKYEFIM 70 (80)
T ss_dssp CCCSSSCCCC-CSSSCEEC-SSSCCSSSCCEETTHHHHHHH-HHCCSBCSS--SCCBCCC
T ss_pred CCCeEcCccc-cCCCeeEe-ccccCCcCCeeCHHHHHHHHh-hCCCCCCCC--CCCeeec
Confidence 4588887432 12456653 364 9999999999998 334578999 9986654
No 76
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=83.98 E-value=1.5 Score=40.66 Aligned_cols=51 Identities=12% Similarity=0.098 Sum_probs=32.4
Q ss_pred cccCCCCcccchhhHhhhhhcC--CCCCCccccccccccccC-----cccccHhHhhHhH
Q 025405 174 VRRYQILQIYPRFSFLPFCSLD--CYFPRCNHFGCQLYFNWK-----KCVFKYHLKGHML 226 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~--~~~~~CPv~GC~~~l~~~-----dL~~D~~l~~~~~ 226 (253)
++|..|+++|+.+.+...+... ....+||. |...|+.+ +-.|+..+.+...
T Consensus 145 ~~C~~C~~~~~~~~~~~~~~~~~~~~~P~Cp~--Cgg~lrP~VV~FGE~lp~~~~~~~~~ 202 (361)
T 1q14_A 145 CHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDV--CGELVKPAIVFFGEDLPDSFSETWLN 202 (361)
T ss_dssp EEETTTCCEECTHHHHHHTTSSSCSCCCBCTT--TCCBEEEEECCBTSCCCHHHHHHHHH
T ss_pred cCcCCCCccCcHHHHHHHHhhcccCCCCCCcC--CCCEeCCCcccccccCCHHHHHHHHH
Confidence 5688899999998887766411 12378996 88755433 4445555444433
No 77
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=83.84 E-value=0.61 Score=32.14 Aligned_cols=47 Identities=6% Similarity=-0.065 Sum_probs=35.2
Q ss_pred cccCCCCccccccccCCccc-CCCCcc-cchhhHhhhhhcCCCCCCccccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRR-YQILQI-YPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s-~~CgHv-Yek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
+..|+|-+ ....+++.- .-|||. |-.+-+..+.+ .+..||+ |.+.|.
T Consensus 8 ~~~C~IC~---~~~~~~~~~~~pCgH~~~C~~C~~~~~~---~~~~CPi--CR~~i~ 56 (64)
T 2vje_A 8 IEPCVICQ---GRPKNGCIVHGKTGHLMACFTCAKKLKK---RNKPCPV--CRQPIQ 56 (64)
T ss_dssp GSCCTTTS---SSCSCEEEEETTEEEEEECHHHHHHHHH---TTCCCTT--TCCCCC
T ss_pred cCCCCcCC---CCCCCEEEECCCCCChhhHHHHHHHHHH---cCCcCCC--cCcchh
Confidence 45699998 345777752 259999 79999999886 2457999 888653
No 78
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=83.48 E-value=0.45 Score=31.81 Aligned_cols=40 Identities=8% Similarity=0.017 Sum_probs=29.0
Q ss_pred cCCcccCCCCcccchhhHhhhhhcCCCCCCcccccccccccc
Q 025405 171 AEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW 212 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~ 212 (253)
+.|+.|..||..|....-+..+-...+..+||+ |+..+..
T Consensus 12 ~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~--C~k~f~~ 51 (62)
T 1vd4_A 12 RASFKCPVCSSTFTDLEANQLFDPMTGTFRCTF--CHTEVEE 51 (62)
T ss_dssp SSEEECSSSCCEEEHHHHHHHEETTTTEEBCSS--SCCBCEE
T ss_pred CCCccCCCCCchhccHHHhHhhcCCCCCEECCC--CCCcccc
Confidence 568999999999988776663322345678998 8886544
No 79
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=82.92 E-value=0.75 Score=43.09 Aligned_cols=54 Identities=9% Similarity=0.138 Sum_probs=36.4
Q ss_pred cccCCCCcccccc-ccCCcc---cCCCCcccchhhHhhhhhcCCC--------CCCcccccccccccc
Q 025405 157 NISCPLSGKPITE-LAEPVR---RYQILQIYPRFSFLPFCSLDCY--------FPRCNHFGCQLYFNW 212 (253)
Q Consensus 157 n~~CPlT~~~i~~-l~~Pv~---s~~CgHvYek~aI~~~i~~~~~--------~~~CPv~GC~~~l~~ 212 (253)
..-|+|...-+.. -+-|-+ |.+|||.|-...|..|+++..+ .-.||. |.+.|+-
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPy--Cr~pIs~ 373 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPF--CKAKLST 373 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTT--TCCEEEG
T ss_pred CccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCC--CCCcCCc
Confidence 3459999853311 112533 5599999999999999973221 246998 9997763
No 80
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=82.71 E-value=1.1 Score=40.48 Aligned_cols=64 Identities=20% Similarity=0.130 Sum_probs=38.0
Q ss_pred cccCCCCcccchhhHhh----hhhcCCCCCCcccccccccccc-----CcccccHhHhhHhHHHHhhccCCCeEEEeccc
Q 025405 174 VRRYQILQIYPRFSFLP----FCSLDCYFPRCNHFGCQLYFNW-----KKCVFKYHLKGHMLFMQVLEYDGDIYLLGLAS 244 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~----~i~~~~~~~~CPv~GC~~~l~~-----~dL~~D~~l~~~~~~~~~~~~~~~~~~~~~~~ 244 (253)
++|..|++.|+.+.++. .+. .....+|| |...|+. .+-.|+..+.+....++ .-|++|. .
T Consensus 155 ~~C~~C~~~~~~~~~~~~~~~~~~-~~~~P~C~---Cgg~lrPdVV~FGE~lp~~~~~~a~~~~~----~aDllLv---i 223 (290)
T 3u31_A 155 AVCCTCNKIVKLNKIMLQKTSHFM-HQLPPECP---CGGIFKPNIILFGEVVSSDLLKEAEEEIA----KCDLLLV---I 223 (290)
T ss_dssp EEETTTCCEEECCTGGGSTTSSTT-TSSSCBCT---TSCBEEEEECCBTSBCCHHHHHHHHHHHH----HCSEEEE---E
T ss_pred ceeCCCCCcCChhHhhhccccccc-ccCCCCCC---CCCEECCeEEEcCCCCCHHHHHHHHHHHh----cCCEEEE---E
Confidence 57889999998766542 121 23357899 9876553 34445555555554443 3566553 4
Q ss_pred CCcc
Q 025405 245 GTSL 248 (253)
Q Consensus 245 ~~~~ 248 (253)
||||
T Consensus 224 GTSl 227 (290)
T 3u31_A 224 GTSS 227 (290)
T ss_dssp SCCS
T ss_pred CcCC
Confidence 6665
No 81
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=82.55 E-value=1 Score=27.37 Aligned_cols=35 Identities=9% Similarity=-0.182 Sum_probs=24.6
Q ss_pred cCCcccCCCCcccchhhH-hhhhhc--CCCCCCccccc
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCSL--DCYFPRCNHFG 205 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~~--~~~~~~CPv~G 205 (253)
+.|++|..|+..|....- ..+++. ..+...||.-|
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg 45 (45)
T 2epq_A 8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG 45 (45)
T ss_dssp CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence 569999999999966554 444542 24668899854
No 82
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=81.94 E-value=0.71 Score=33.27 Aligned_cols=43 Identities=9% Similarity=0.077 Sum_probs=33.1
Q ss_pred cccCCCCccccccccCCcccCCCCcc-cchhhHhhhhhcCCCCCCcccccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQI-YPRFSFLPFCSLDCYFPRCNHFGCQLYFNW 212 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHv-Yek~aI~~~i~~~~~~~~CPv~GC~~~l~~ 212 (253)
...|||-+ ..+.+||.- .|||. |-..-+..+ ..||+ |...+..
T Consensus 18 ~~~C~IC~---~~~~~~v~~-pCgH~~~C~~C~~~~-------~~CP~--Cr~~i~~ 61 (79)
T 2yho_A 18 AMLCMVCC---EEEINSTFC-PCGHTVCCESCAAQL-------QSCPV--CRSRVEH 61 (79)
T ss_dssp HTBCTTTS---SSBCCEEEE-TTCBCCBCHHHHTTC-------SBCTT--TCCBCCE
T ss_pred CCEeEEeC---cccCcEEEE-CCCCHHHHHHHHHhc-------CcCCC--CCchhhC
Confidence 45799998 456889875 59999 998888755 27999 8886553
No 83
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=80.45 E-value=1.6 Score=38.09 Aligned_cols=62 Identities=19% Similarity=0.186 Sum_probs=38.5
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCcccccccccccc-----CcccccHhHhhHhHHHHhhccCCCeEEEecccCCcc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNW-----KKCVFKYHLKGHMLFMQVLEYDGDIYLLGLASGTSL 248 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~-----~dL~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (253)
++|..|++.|+.+.. +. .....+||. |...++. .+-.|+..+.+....++. -|++|. .||||
T Consensus 122 ~~C~~C~~~~~~~~~---~~-~~~~p~C~~--Cgg~lrP~Vv~FgE~lp~~~~~~a~~~~~~----adlllv---iGTSl 188 (249)
T 1m2k_A 122 VRCTSCNNSFEVESA---PK-IPPLPKCDK--CGSLLRPGVVWAGEMLPPDVLDRAMREVER----ADVIIV---AGTSA 188 (249)
T ss_dssp EEESSSSCEEECSSC---CC-SSSCCBCSS--SSSBEEEEECCTTSCCCHHHHHHHHHHHHH----CSEEEE---ESCCS
T ss_pred eEeCCCCCcccchhh---cc-CCCCCCCCC--CCCCcCCeEEecCCCCCHHHHHHHHHHHhc----CCEEEE---EccCC
Confidence 457789999987654 33 223578996 8875543 455566666666555543 466554 45664
No 84
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=79.94 E-value=0.46 Score=38.76 Aligned_cols=27 Identities=7% Similarity=-0.030 Sum_probs=20.7
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCccccccccccc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
++|..|||.|+.. .....||. |++.+.
T Consensus 133 y~C~~Cg~~~~~~---------~~~~~Cp~--CG~~~~ 159 (165)
T 2lcq_A 133 YVCIGCGRKFSTL---------PPGGVCPD--CGSKVK 159 (165)
T ss_dssp EEESSSCCEESSC---------CGGGBCTT--TCCBEE
T ss_pred EECCCCCCcccCC---------CCCCcCCC--CCCcce
Confidence 8899999999854 23458999 887543
No 85
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=79.37 E-value=0.53 Score=39.71 Aligned_cols=26 Identities=8% Similarity=-0.202 Sum_probs=19.4
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCcccccccc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQL 208 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~ 208 (253)
.+|..|||+|+-+ ..+-.||+-|+++
T Consensus 156 ~~C~~CG~~~~g~---------~~p~~CP~C~~~k 181 (191)
T 1lko_A 156 WRCRNCGYVHEGT---------GAPELCPACAHPK 181 (191)
T ss_dssp EEETTTCCEEEEE---------ECCSBCTTTCCBG
T ss_pred EEECCCCCEeeCC---------CCCCCCCCCcCCH
Confidence 7799999999832 2334899977765
No 86
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=77.00 E-value=3 Score=40.47 Aligned_cols=29 Identities=10% Similarity=0.024 Sum_probs=23.7
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCccc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNH 203 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv 203 (253)
++|..||+.|+.+.|.+.+. +.....||.
T Consensus 300 ~~C~~Cg~~~~~e~i~~~i~-~~~~P~Cp~ 328 (492)
T 4iao_A 300 ATCVTCHWNLPGERIFNKIR-NLELPLCPY 328 (492)
T ss_dssp EEETTTCCEEEGGGGHHHHH-TTCCCBCTT
T ss_pred eecCCCCCcCCHHHHHHHHh-ccCCCCCcc
Confidence 57899999999999988886 445678886
No 87
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=76.44 E-value=1.3 Score=30.21 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=21.3
Q ss_pred Cccc--CCCCcccch-hhHhhhhhc--CCCCCCcccccccccc
Q 025405 173 PVRR--YQILQIYPR-FSFLPFCSL--DCYFPRCNHFGCQLYF 210 (253)
Q Consensus 173 Pv~s--~~CgHvYek-~aI~~~i~~--~~~~~~CPv~GC~~~l 210 (253)
|++| ..||..|.. ..+..+++. ..+...||+.||+..+
T Consensus 1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f 43 (85)
T 2j7j_A 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRF 43 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEE
T ss_pred CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCcc
Confidence 5566 667777753 334444431 2344667777777543
No 88
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=75.17 E-value=2.3 Score=37.13 Aligned_cols=47 Identities=15% Similarity=0.212 Sum_probs=36.9
Q ss_pred cCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccc
Q 025405 159 SCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 159 ~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
.|.+....+ .-=++|..|+|.|-...+..|++ ..+..+||. |+....
T Consensus 182 ~C~iC~~iv---~~g~~C~~C~~~~H~~C~~~~~~-~~~~~~CP~--C~~~W~ 228 (238)
T 3nw0_A 182 ICNICHSLL---IQGQSCETCGIRMHLPCVAKYFQ-SNAEPRCPH--CNDYWP 228 (238)
T ss_dssp BCTTTCSBC---SSCEECSSSCCEECHHHHHHHTT-TCSSCBCTT--TCCBCC
T ss_pred cCcchhhHH---hCCcccCccChHHHHHHHHHHHH-hCCCCCCCC--CCCCCC
Confidence 488888654 33578888999999999999998 455679994 988543
No 89
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=74.35 E-value=0.87 Score=30.61 Aligned_cols=27 Identities=15% Similarity=0.082 Sum_probs=19.5
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCccccc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFG 205 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~G 205 (253)
++|-+||++|+++-.. . -..++||.-|
T Consensus 4 Y~C~rCg~~fs~~el~-~----lP~IrCpyCG 30 (48)
T 4ayb_P 4 YRCGKCWKTFTDEQLK-V----LPGVRCPYCG 30 (48)
T ss_dssp -CCCCTTTTCCCCCSC-C----CSSSCCTTTC
T ss_pred EEeeccCCCccHHHHh-h----CCCcccCccC
Confidence 6788999999987432 2 2579999944
No 90
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=74.12 E-value=1.2 Score=38.00 Aligned_cols=25 Identities=12% Similarity=-0.225 Sum_probs=19.6
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCcccccccc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQL 208 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~ 208 (253)
.+|..|||+|+- ...-.||+-|+++
T Consensus 172 ~~C~~CG~i~~g----------~~p~~CP~C~~~k 196 (202)
T 1yuz_A 172 HLCPICGYIHKG----------EDFEKCPICFRPK 196 (202)
T ss_dssp EECSSSCCEEES----------SCCSBCTTTCCBG
T ss_pred EEECCCCCEEcC----------cCCCCCCCCCCCh
Confidence 789999999982 1346899988776
No 91
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=73.97 E-value=2.8 Score=38.59 Aligned_cols=29 Identities=10% Similarity=0.024 Sum_probs=22.6
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCccc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNH 203 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv 203 (253)
++|..|++.|+.+.+...+. ......||.
T Consensus 162 ~~C~~C~~~~~~~~~~~~~~-~~~~P~Cp~ 190 (354)
T 2hjh_A 162 ATCVTCHWNLPGERIFNKIR-NLELPLCPY 190 (354)
T ss_dssp EEETTTCCEEEGGGGHHHHH-TTCCCBCTT
T ss_pred cccCCCCCcCCHHHHHHHhh-ccCCCcCcc
Confidence 56888999999998888776 334578885
No 92
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.69 E-value=1 Score=31.58 Aligned_cols=44 Identities=7% Similarity=-0.083 Sum_probs=34.3
Q ss_pred cCCcccCCCCcccchhhHhhhhhc-CCCCCCccccccccccccCccc
Q 025405 171 AEPVRRYQILQIYPRFSFLPFCSL-DCYFPRCNHFGCQLYFNWKKCV 216 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~~i~~-~~~~~~CPv~GC~~~l~~~dL~ 216 (253)
..|+.|..|+..|.+..+..+... ......||. |...+.+.+|.
T Consensus 15 ~r~~~C~~C~~~~~~~~L~~H~~~c~~~~~~C~~--C~~~~~~~~l~ 59 (75)
T 2d9k_A 15 LRLAVCQHCDLELSILKLKEHEDYCGARTELCGN--CGRNVLVKDLK 59 (75)
T ss_dssp CCCEECSSSCCEECHHHHHHHHHHHHHCEEECSS--SCCEEETTGGG
T ss_pred CcccCCcccChHhhHHHHHHHHhHcCCCceEccc--CCCcCcHHHHH
Confidence 458999999999998888888731 145688998 99977776665
No 93
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=71.88 E-value=1.4 Score=30.29 Aligned_cols=28 Identities=21% Similarity=0.381 Sum_probs=22.2
Q ss_pred cccCCCCccccccccCCcccC--CCCcccc
Q 025405 157 NISCPLSGKPITELAEPVRRY--QILQIYP 184 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~--~CgHvYe 184 (253)
-+.||.++.++..-+.-+.|+ .||+.|.
T Consensus 10 iL~CP~c~~~L~~~~~~L~C~~~~c~~~YP 39 (56)
T 2kpi_A 10 ILACPACHAPLEERDAELICTGQDCGLAYP 39 (56)
T ss_dssp SCCCSSSCSCEEEETTEEEECSSSCCCEEE
T ss_pred heeCCCCCCcceecCCEEEcCCcCCCcEEe
Confidence 357999998876556777888 8999986
No 94
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.33 E-value=5.2 Score=27.79 Aligned_cols=42 Identities=12% Similarity=0.176 Sum_probs=31.5
Q ss_pred cccCCCCccccccccCCcccCCCCcc-cchhhHhhhhhcCCCCCCccccccccccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQI-YPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHv-Yek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
...|+|-+. ...+||.- -|||. |-..-+.. ...||+ |...|.
T Consensus 15 ~~~C~IC~~---~~~~~v~~-pCgH~~~C~~C~~~-------~~~CP~--CR~~i~ 57 (68)
T 2ea5_A 15 SKDCVVCQN---GTVNWVLL-PCRHTCLCDGCVKY-------FQQCPM--CRQFVQ 57 (68)
T ss_dssp SSCCSSSSS---SCCCCEET-TTTBCCSCTTHHHH-------CSSCTT--TCCCCC
T ss_pred CCCCCCcCc---CCCCEEEE-CCCChhhhHHHHhc-------CCCCCC--CCcchh
Confidence 456999974 45777764 59999 99888873 257999 888654
No 95
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=69.06 E-value=2.5 Score=28.66 Aligned_cols=49 Identities=14% Similarity=0.125 Sum_probs=33.1
Q ss_pred cCCcccCCCCcccchhh-Hhhhhhc--CCCCCCccccccccccccCcccccHhHhhHhH
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCSL--DCYFPRCNHFGCQLYFNWKKCVFKYHLKGHML 226 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~~--~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~ 226 (253)
+.|++|..||..|...+ +..+++. ..+...|++ |+..+.. -..|+++|+
T Consensus 2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~-----~~~L~~H~~ 53 (60)
T 4gzn_C 2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRD-----QSEVNRHLK 53 (60)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESS-----HHHHHHHGG
T ss_pred CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCC-----HHHHHHHhC
Confidence 57999999999997654 5555542 346678998 9875443 334555554
No 96
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=67.78 E-value=2.2 Score=35.46 Aligned_cols=25 Identities=8% Similarity=-0.283 Sum_probs=17.3
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCcccccccc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQL 208 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~ 208 (253)
.+|..|||+|+. ..+-.||+-|-++
T Consensus 139 ~~C~~CG~i~~~----------~~p~~CP~Cg~~~ 163 (170)
T 3pwf_A 139 YICPICGYTAVD----------EAPEYCPVCGAPK 163 (170)
T ss_dssp EECTTTCCEEES----------CCCSBCTTTCCBG
T ss_pred eEeCCCCCeeCC----------CCCCCCCCCCCCH
Confidence 668999999982 1334899955443
No 97
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=66.91 E-value=1.9 Score=32.48 Aligned_cols=32 Identities=16% Similarity=-0.045 Sum_probs=20.8
Q ss_pred cccCCCCcccchhh------H-----hhhhhcCCCCCCcccccccc
Q 025405 174 VRRYQILQIYPRFS------F-----LPFCSLDCYFPRCNHFGCQL 208 (253)
Q Consensus 174 v~s~~CgHvYek~a------I-----~~~i~~~~~~~~CPv~GC~~ 208 (253)
++|..|||+|+-+. | .+-| ...-+||+-|.++
T Consensus 36 y~C~vCGyvYD~~~Gdp~~gI~pGT~fedl---PddW~CPvCga~K 78 (87)
T 1s24_A 36 WICITCGHIYDEALGDEAEGFTPGTRFEDI---PDDWCCPDCGATK 78 (87)
T ss_dssp EEETTTTEEEETTSCCTTTTCCSCCCGGGC---CTTCCCSSSCCCG
T ss_pred EECCCCCeEecCCcCCcccCcCCCCChhHC---CCCCCCCCCCCCH
Confidence 78999999998631 1 1112 1335799977765
No 98
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=66.35 E-value=3.1 Score=32.09 Aligned_cols=60 Identities=15% Similarity=0.160 Sum_probs=38.9
Q ss_pred cCCCCccccccccCCcccCCCCcccchhhHhhhhhcC-------------------CCCCCcc-cccccc-ccccCcccc
Q 025405 159 SCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLD-------------------CYFPRCN-HFGCQL-YFNWKKCVF 217 (253)
Q Consensus 159 ~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~-------------------~~~~~CP-v~GC~~-~l~~~dL~~ 217 (253)
.||....|| ..=.|-.-|+|+|-.+-++.+-+++ .+-.-|+ +.||.. +|+..||..
T Consensus 3 fC~~C~~Pi---~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe~~~~~~if~C~~~~~CkrtyLs~rdlqa 79 (101)
T 3vk6_A 3 FCDKCGLPI---KVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCSIVQGCKRTYLSQRDLQA 79 (101)
T ss_dssp BCTTTCSBC---SEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEEEEEGGGCCCCCCCCCCCCCCSSHHHHHH
T ss_pred ecCccCCCe---EEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeEEeccCCEEECCCCCCHHHHhcCHHHHHH
Confidence 477777776 3345667899999999999987521 1224466 666666 566666654
Q ss_pred cHhH
Q 025405 218 KYHL 221 (253)
Q Consensus 218 D~~l 221 (253)
-...
T Consensus 80 HI~~ 83 (101)
T 3vk6_A 80 HINH 83 (101)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 99
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=66.30 E-value=5 Score=24.63 Aligned_cols=33 Identities=6% Similarity=-0.228 Sum_probs=23.7
Q ss_pred cCCcccCCCCcccchhh-HhhhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~~~--~~~~~CPv 203 (253)
+.|+.|..|+..|.... +..+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (48)
T 2epr_A 10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGP 45 (48)
T ss_dssp CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCC
T ss_pred CcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCC
Confidence 67999999999997654 45555532 35578887
No 100
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=66.21 E-value=6.5 Score=26.26 Aligned_cols=49 Identities=20% Similarity=0.221 Sum_probs=32.3
Q ss_pred cCCcccCCCCcccch-hhHhhhhhcC--CCCCCccccccccccccCcccccHhHhhHhH
Q 025405 171 AEPVRRYQILQIYPR-FSFLPFCSLD--CYFPRCNHFGCQLYFNWKKCVFKYHLKGHML 226 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek-~aI~~~i~~~--~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~ 226 (253)
+.|++|..|+..|.. ..+..+++.. .+..+|++ |+..+.. -..|+++++
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~-----~~~L~~H~~ 66 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNR-----PANLKTHTR 66 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESC-----HHHHHHHHH
T ss_pred CCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCC-----HHHHHHHHH
Confidence 568999999999965 4455556522 34578998 8875443 345666664
No 101
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=66.19 E-value=5.9 Score=25.08 Aligned_cols=39 Identities=8% Similarity=-0.077 Sum_probs=27.5
Q ss_pred cCCcccCCCCcccchhh-Hhhhhh-cC--CCCCCccccccccccc
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCS-LD--CYFPRCNHFGCQLYFN 211 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~-~~--~~~~~CPv~GC~~~l~ 211 (253)
+.|+.|..|+..|.... +..+++ .. .+..+|++ |...++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~F~ 52 (54)
T 2eps_A 10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPS 52 (54)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS--SCCSSC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCC--CCCCCC
Confidence 67899999999997654 445554 22 35578998 877554
No 102
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=66.09 E-value=3.3 Score=27.99 Aligned_cols=35 Identities=9% Similarity=-0.315 Sum_probs=20.4
Q ss_pred cccCCCCcccchhh--HhhhhhcC------CCCCCcccccccc
Q 025405 174 VRRYQILQIYPRFS--FLPFCSLD------CYFPRCNHFGCQL 208 (253)
Q Consensus 174 v~s~~CgHvYek~a--I~~~i~~~------~~~~~CPv~GC~~ 208 (253)
++|..|||+|+-+. -.+=|... ...-+||+-|.++
T Consensus 4 y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~K 46 (52)
T 1e8j_A 4 YVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASK 46 (52)
T ss_dssp EECSSSCCCCCTTTCCTTTTCCSSCCTTSSCTTCCCSSSCCCT
T ss_pred EEeCCCCeEEcCCcCCcccCcCCCCchHHCCCCCcCCCCCCcH
Confidence 67999999998542 11111100 1234799977665
No 103
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=65.05 E-value=4.5 Score=29.44 Aligned_cols=47 Identities=13% Similarity=-0.005 Sum_probs=32.4
Q ss_pred cCCcccCCCCccc--chhhHhhhhhcC-CCCCCccccccccccccCcccccHhHhhH
Q 025405 171 AEPVRRYQILQIY--PRFSFLPFCSLD-CYFPRCNHFGCQLYFNWKKCVFKYHLKGH 224 (253)
Q Consensus 171 ~~Pv~s~~CgHvY--ek~aI~~~i~~~-~~~~~CPv~GC~~~l~~~dL~~D~~l~~~ 224 (253)
+.|+.|..||..| .+..+..+++.. .+...|++ |.+.+.. -..|+++
T Consensus 32 ~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~--Cgk~F~~-----~~~L~~H 81 (96)
T 2ctd_A 32 KGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHH--CGKQLRS-----LAGMKYH 81 (96)
T ss_dssp TSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSS--SCCCCSS-----HHHHHHH
T ss_pred CCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCC--CCCeeCC-----HHHHHHH
Confidence 5689999999999 567777776532 34577988 8875443 3456666
No 104
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=64.97 E-value=4 Score=27.03 Aligned_cols=34 Identities=15% Similarity=-0.093 Sum_probs=19.7
Q ss_pred cccCCCCcccchhhH--hhhhhcCCCCCCcccccccc
Q 025405 174 VRRYQILQIYPRFSF--LPFCSLDCYFPRCNHFGCQL 208 (253)
Q Consensus 174 v~s~~CgHvYek~aI--~~~i~~~~~~~~CPv~GC~~ 208 (253)
++|..|||+|+.+.= ..+=. -...-+||+=|-++
T Consensus 5 y~C~vCGyvyd~~~Gd~t~f~~-lP~dw~CP~Cg~~k 40 (46)
T 6rxn_A 5 YVCNVCGYEYDPAEHDNVPFDQ-LPDDWCCPVCGVSK 40 (46)
T ss_dssp EEETTTCCEECGGGGTTCCGGG-SCTTCBCTTTCCBG
T ss_pred EECCCCCeEEeCCcCCCcchhh-CCCCCcCcCCCCcH
Confidence 689999999985411 11111 12335899955443
No 105
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=63.86 E-value=4.2 Score=25.54 Aligned_cols=39 Identities=5% Similarity=-0.039 Sum_probs=24.9
Q ss_pred cCCcccCCCCcccchhh-Hhhhhhc--CCCCCCccccccccccc
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCSL--DCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~~--~~~~~~CPv~GC~~~l~ 211 (253)
+.|++|..||-.|.... +..+++. ..+..+||+ |+..+.
T Consensus 2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~ 43 (57)
T 3uk3_C 2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAA 43 (57)
T ss_dssp ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEES
T ss_pred CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhC
Confidence 35889999999997654 4445542 245678998 887543
No 106
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.81 E-value=2.6 Score=30.40 Aligned_cols=51 Identities=14% Similarity=0.071 Sum_probs=34.2
Q ss_pred cCCcccCCCCcccc--hhhHhhhhhcC---CCCCCccccccccccccCcccccHhHhhHhHHH
Q 025405 171 AEPVRRYQILQIYP--RFSFLPFCSLD---CYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFM 228 (253)
Q Consensus 171 ~~Pv~s~~CgHvYe--k~aI~~~i~~~---~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~ 228 (253)
+.|+.|..||..|. +..+..+++.. .+...|++ |...+. .-..|+++|+..
T Consensus 22 ~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~-----~~~~L~~H~~~h 77 (98)
T 2gqj_A 22 RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFK-----SKAGLNYHTMAE 77 (98)
T ss_dssp TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCS-----CHHHHHHHHHHH
T ss_pred CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccC-----CHHHHHHHHHHH
Confidence 56889999999995 55666666522 23578998 887543 335577776643
No 107
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=63.46 E-value=2.5 Score=30.16 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=24.2
Q ss_pred cccCCCCccccccc--cCCcccCCCCcccc-hhhHhhhh
Q 025405 157 NISCPLSGKPITEL--AEPVRRYQILQIYP-RFSFLPFC 192 (253)
Q Consensus 157 n~~CPlT~~~i~~l--~~Pv~s~~CgHvYe-k~aI~~~i 192 (253)
-+.||.++.|+..- +.-+.|+.||+.|. ++.|=-+|
T Consensus 10 iL~CP~ck~~L~~~~~~g~LvC~~c~~~YPI~dGIPvmL 48 (67)
T 2jny_A 10 VLACPKDKGPLRYLESEQLLVNERLNLAYRIDDGIPVLL 48 (67)
T ss_dssp CCBCTTTCCBCEEETTTTEEEETTTTEEEEEETTEECCC
T ss_pred HhCCCCCCCcCeEeCCCCEEEcCCCCccccCCCCEeeeC
Confidence 46799999886543 23567889999996 34444343
No 108
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=63.33 E-value=3.4 Score=21.78 Aligned_cols=17 Identities=24% Similarity=0.075 Sum_probs=13.4
Q ss_pred CCcccCCCCcccchhhH
Q 025405 172 EPVRRYQILQIYPRFSF 188 (253)
Q Consensus 172 ~Pv~s~~CgHvYek~aI 188 (253)
.|+.|..||..|...+-
T Consensus 2 k~~~C~~C~k~f~~~~~ 18 (27)
T 2kvh_A 2 KPFSCSLCPQRSRDFSA 18 (27)
T ss_dssp CCEECSSSSCEESSHHH
T ss_pred cCccCCCcChhhCCHHH
Confidence 58889999999976543
No 109
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.98 E-value=4.3 Score=27.43 Aligned_cols=51 Identities=8% Similarity=-0.083 Sum_probs=33.9
Q ss_pred cCCcccCCCCcccchhh-HhhhhhcC-----CCCCCccccccccccccCcccccHhHhhHhHHH
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCSLD-----CYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFM 228 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~~~-----~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~ 228 (253)
+.|+.|..|+..|.... +..+++.. .+...|++ |...+. .-..|+++++..
T Consensus 5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~-----~~~~L~~H~~~~ 61 (78)
T 2d9h_A 5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFE-----KPDSVAAHRSKS 61 (78)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEES-----SHHHHHHHHHHT
T ss_pred CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhC-----CHHHHHHHHHHh
Confidence 57899999999997654 44455421 35678998 887544 334577776554
No 110
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=62.84 E-value=3.4 Score=26.90 Aligned_cols=50 Identities=16% Similarity=0.258 Sum_probs=32.7
Q ss_pred cCCcccCCCCcccchh-hHhhhhhc----CCCCCCccccccccccccCcccccHhHhhHhHH
Q 025405 171 AEPVRRYQILQIYPRF-SFLPFCSL----DCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLF 227 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~-aI~~~i~~----~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~ 227 (253)
+.|+.|..||..|... .+..+++. ..+...||+ |+..+. .-..|+++++.
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~-----~~~~L~~H~~~ 62 (66)
T 2drp_A 8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFT-----RKDNMTAHVKI 62 (66)
T ss_dssp TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEES-----CHHHHHHHHHH
T ss_pred CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccC-----CHHHHHHHHHH
Confidence 5689999999999754 45556543 235578998 887543 23445666553
No 111
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.44 E-value=7.3 Score=23.36 Aligned_cols=33 Identities=9% Similarity=0.061 Sum_probs=22.8
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++.. .+...||+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2enf_A 10 EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred CcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence 5789999999999876654 344422 34567876
No 112
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.81 E-value=7.4 Score=23.33 Aligned_cols=33 Identities=9% Similarity=0.058 Sum_probs=22.8
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|++|..||..|...+-+ .+++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yti_A 10 EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred CcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence 5789999999999876654 34432 234567876
No 113
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=61.55 E-value=3.7 Score=21.66 Aligned_cols=17 Identities=6% Similarity=-0.156 Sum_probs=13.6
Q ss_pred CCcccCCCCcccchhhH
Q 025405 172 EPVRRYQILQIYPRFSF 188 (253)
Q Consensus 172 ~Pv~s~~CgHvYek~aI 188 (253)
.|+.|..||..|....-
T Consensus 2 k~~~C~~C~k~f~~~~~ 18 (28)
T 2kvf_A 2 RPYSCSVCGKRFSLKHQ 18 (28)
T ss_dssp CSEECSSSCCEESCHHH
T ss_pred cCccCCCCCcccCCHHH
Confidence 58899999999987543
No 114
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.43 E-value=6.2 Score=23.79 Aligned_cols=33 Identities=9% Similarity=-0.139 Sum_probs=23.2
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|++|..||..|...+-+ .+++. ..+..+||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em4_A 10 QRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS 45 (46)
T ss_dssp SSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 5689999999999876544 34432 245678885
No 115
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=61.36 E-value=0.74 Score=36.83 Aligned_cols=58 Identities=12% Similarity=0.054 Sum_probs=38.9
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCcccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCVF 217 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~~ 217 (253)
+.+||+..+++ .+.++..--.-..+|-..++...|. .-.+.||..||...+.++++..
T Consensus 66 ~~~CP~Cr~~~-~~~~~~~~l~~~~~~~d~~~~~~i~--~L~v~Cpn~GC~~~~~l~~l~~ 123 (141)
T 3knv_A 66 PQNCAACVHEG-IYEEGISILESSSAFPDNAARREVE--SLPAVCPSDGCTWKGTLKEYES 123 (141)
T ss_dssp CEECHHHHHTT-CCCTTTTEECGGGCEECHHHHHHHH--TSEEECCSTTCCCEEEHHHHHH
T ss_pred CCCCCCCCCcc-cccccccccchhhhcccHHHHHHHc--ccccccCCCCCCCEeEHHHHHH
Confidence 35799887653 2233221111246777778888886 5678999999999888877653
No 116
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=61.25 E-value=3.1 Score=22.15 Aligned_cols=17 Identities=18% Similarity=0.071 Sum_probs=13.7
Q ss_pred CCcccCCCCcccchhhH
Q 025405 172 EPVRRYQILQIYPRFSF 188 (253)
Q Consensus 172 ~Pv~s~~CgHvYek~aI 188 (253)
.|+.|..||..|...+-
T Consensus 2 k~~~C~~C~k~f~~~~~ 18 (27)
T 2kvg_A 2 APYRCPLCRAGCPSLAS 18 (27)
T ss_dssp CTEEETTTTEEESCHHH
T ss_pred cCcCCCCCCcccCCHHH
Confidence 58899999999976543
No 117
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.13 E-value=8.1 Score=23.23 Aligned_cols=33 Identities=6% Similarity=-0.089 Sum_probs=23.1
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|++|..||..|....-+ .+++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en9_A 10 KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS 45 (46)
T ss_dssp SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred CCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5789999999999876554 34432 235677886
No 118
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=60.95 E-value=3.7 Score=21.70 Aligned_cols=22 Identities=5% Similarity=-0.046 Sum_probs=15.8
Q ss_pred CCcccCCCCcccchhh-Hhhhhh
Q 025405 172 EPVRRYQILQIYPRFS-FLPFCS 193 (253)
Q Consensus 172 ~Pv~s~~CgHvYek~a-I~~~i~ 193 (253)
.|+.|..||..|.... +..+++
T Consensus 2 k~~~C~~C~~~f~~~~~l~~H~~ 24 (30)
T 2m0d_A 2 KPYQCDYCGRSFSDPTSKMRHLE 24 (30)
T ss_dssp CCEECTTTCCEESCHHHHHHHHH
T ss_pred cCccCCCCCcccCCHHHHHHHHH
Confidence 5889999999997544 444444
No 119
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=60.80 E-value=74 Score=26.65 Aligned_cols=70 Identities=11% Similarity=0.083 Sum_probs=38.5
Q ss_pred CCchh-hhHHHHhhhccCCCCCCCCCCcceeeeccc-Cc-cccccCCCCccccccccCCcccCCCCcccchhh
Q 025405 118 NDPLH-KFREAVWNVHHAGELMPGEEQEDIVMTSTQ-SN-ILNISCPLSGKPITELAEPVRRYQILQIYPRFS 187 (253)
Q Consensus 118 ~~~~~-~Fke~I~~v~~~g~p~p~deddDi~v~~~q-~~-~~n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~a 187 (253)
.++.+ .+.+..-.+...|.+.|.-.++|-..+... .. +..-.|+...++|..+..-.-|..||++|....
T Consensus 119 ~~~~~~~i~~~y~~Lk~~G~~FP~~~e~~a~f~~~~~~~W~~~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C 191 (220)
T 1dvp_A 119 SSDKYQAIKDTMTILKAKGHTFPELREADAMFTADTAPNWADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC 191 (220)
T ss_dssp TCSSCCHHHHHHHHHHHTTCCCCCCCC---CCCCSCCCCCCCCSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred cchHHHHHHHHHHHHhhcCccccccccccccccccccccCCCCCccCCCCCccCCcccccccCCcCCEEChHH
Confidence 34444 455555555556655554322232222110 01 123468888888877777777888888887653
No 120
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=60.52 E-value=3 Score=29.74 Aligned_cols=36 Identities=14% Similarity=0.212 Sum_probs=23.3
Q ss_pred cccCCCCcccccccc--CCcccCCCCcccc-hhhHhhhh
Q 025405 157 NISCPLSGKPITELA--EPVRRYQILQIYP-RFSFLPFC 192 (253)
Q Consensus 157 n~~CPlT~~~i~~l~--~Pv~s~~CgHvYe-k~aI~~~i 192 (253)
-+.||.++.++..-. .-+.|+.||..|. ++.|-.+|
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~dGIPvmL 46 (68)
T 2jr6_A 8 ILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPYML 46 (68)
T ss_dssp CCBCSSSCCBCEEETTTTEEEETTTTEEEEEETTEECCC
T ss_pred heECCCCCCcCeEeCCCCEEEcCCCCcEecCCCCeeeeC
Confidence 357999998864322 4567888998886 33443333
No 121
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=60.40 E-value=3 Score=29.74 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=22.8
Q ss_pred ccCCCCcccccccc--CCcccCCCCcccc-hhhHhhhh
Q 025405 158 ISCPLSGKPITELA--EPVRRYQILQIYP-RFSFLPFC 192 (253)
Q Consensus 158 ~~CPlT~~~i~~l~--~Pv~s~~CgHvYe-k~aI~~~i 192 (253)
+.||.++.++..-. .-+.|+.||..|. ++.|-.+|
T Consensus 9 L~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~dGIPvmL 46 (68)
T 2hf1_A 9 LVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMML 46 (68)
T ss_dssp CBCTTTCCBCEEETTTTEEEETTTTEEEEEETTEECCC
T ss_pred eECCCCCCcCeEeCCCCEEEcCCCCcEecCCCCeeeeC
Confidence 57999998864322 4567888888886 33443333
No 122
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.16 E-value=9.2 Score=22.87 Aligned_cols=33 Identities=9% Similarity=-0.024 Sum_probs=22.8
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++.. .+...||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq2_A 10 GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45 (46)
T ss_dssp SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999876544 445422 34567876
No 123
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=60.13 E-value=3.5 Score=28.19 Aligned_cols=35 Identities=11% Similarity=-0.263 Sum_probs=20.4
Q ss_pred cccCCCCcccchhh--Hhhhhhc------CCCCCCcccccccc
Q 025405 174 VRRYQILQIYPRFS--FLPFCSL------DCYFPRCNHFGCQL 208 (253)
Q Consensus 174 v~s~~CgHvYek~a--I~~~i~~------~~~~~~CPv~GC~~ 208 (253)
++|..|||+|+-+. -.+=|.. -...-+||+-|.++
T Consensus 4 y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cga~K 46 (55)
T 2v3b_B 4 WQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVGK 46 (55)
T ss_dssp EEETTTCCEEETTTCBTTTTBCTTCCGGGSCTTCCCTTTCCCG
T ss_pred EEeCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCCCCCCCH
Confidence 67899999998642 0000100 01234799977665
No 124
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.08 E-value=9.3 Score=22.78 Aligned_cols=33 Identities=9% Similarity=-0.080 Sum_probs=22.9
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ep1_A 10 EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45 (46)
T ss_dssp CCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred CCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5689999999999875544 44542 235577876
No 125
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=59.95 E-value=3.5 Score=27.01 Aligned_cols=33 Identities=6% Similarity=-0.064 Sum_probs=23.0
Q ss_pred cccCCCCcc-ccccc--cCCcccCCCCcccchhhHh
Q 025405 157 NISCPLSGK-PITEL--AEPVRRYQILQIYPRFSFL 189 (253)
Q Consensus 157 n~~CPlT~~-~i~~l--~~Pv~s~~CgHvYek~aI~ 189 (253)
.+.||-.+. ++.+= ..-+.|..||++|+...|.
T Consensus 5 ~~~CP~C~~~~l~~d~~~gelvC~~CG~v~~e~~id 40 (50)
T 1pft_A 5 QKVCPACESAELIYDPERGEIVCAKCGYVIEENIID 40 (50)
T ss_dssp CCSCTTTSCCCEEEETTTTEEEESSSCCBCCCCCCC
T ss_pred cEeCcCCCCcceEEcCCCCeEECcccCCcccccccc
Confidence 578999976 43211 1237899999999987664
No 126
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.83 E-value=6.7 Score=23.46 Aligned_cols=33 Identities=9% Similarity=-0.098 Sum_probs=23.2
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...||+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~ 45 (46)
T 2eor_A 10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred CcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence 5789999999999875544 34432 245678886
No 127
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.82 E-value=4 Score=27.04 Aligned_cols=50 Identities=14% Similarity=0.079 Sum_probs=32.6
Q ss_pred cCCcccCCCCcccchhh-HhhhhhcC--CCCCCccccccccccccCcccccHhHhhHhHH
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCSLD--CYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLF 227 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~~~--~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~ 227 (253)
+.|++|..|+..|.... +..+++.. .+..+|++ |...+. .-..|+++|+.
T Consensus 7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~-----~~~~L~~H~~~ 59 (70)
T 1x5w_A 7 GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTK-----QPSNLSKHMKK 59 (70)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEES-----SHHHHHHHHHH
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccC-----CHHHHHHHHHH
Confidence 56899999999997554 44555532 34578998 887543 33456666654
No 128
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=59.72 E-value=3.2 Score=29.70 Aligned_cols=36 Identities=17% Similarity=0.252 Sum_probs=23.2
Q ss_pred cccCCCCccccccc--cCCcccCCCCcccc-hhhHhhhh
Q 025405 157 NISCPLSGKPITEL--AEPVRRYQILQIYP-RFSFLPFC 192 (253)
Q Consensus 157 n~~CPlT~~~i~~l--~~Pv~s~~CgHvYe-k~aI~~~i 192 (253)
-+.||.++.++..- +.-+.|+.||+.|. ++.|-.+|
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~dGIPvmL 46 (69)
T 2pk7_A 8 ILACPICKGPLKLSADKTELISKGAGLAYPIRDGIPVML 46 (69)
T ss_dssp TCCCTTTCCCCEECTTSSEEEETTTTEEEEEETTEECCC
T ss_pred heeCCCCCCcCeEeCCCCEEEcCCCCcEecCcCCeeeeC
Confidence 46799999886422 24567888999886 33443333
No 129
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.56 E-value=7.4 Score=23.41 Aligned_cols=33 Identities=9% Similarity=-0.117 Sum_probs=22.9
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...||.
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytp_A 10 ERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred CCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5789999999999876554 44442 235577875
No 130
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.40 E-value=9.2 Score=22.87 Aligned_cols=33 Identities=6% Similarity=-0.054 Sum_probs=22.7
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2emg_A 10 ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS 45 (46)
T ss_dssp CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred CCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5689999999999875544 455422 34567875
No 131
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.04 E-value=10 Score=22.76 Aligned_cols=33 Identities=9% Similarity=-0.016 Sum_probs=22.9
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++. ..+..+|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yth_A 10 EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45 (46)
T ss_dssp SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred CcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 5689999999999876554 44442 235577875
No 132
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.95 E-value=9.4 Score=22.98 Aligned_cols=33 Identities=12% Similarity=-0.029 Sum_probs=23.0
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|++|..|+..|....-+ .+++.. .+...||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eon_A 10 EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred CcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence 5799999999999876544 445422 34577875
No 133
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=58.88 E-value=7.9 Score=23.28 Aligned_cols=33 Identities=9% Similarity=-0.067 Sum_probs=23.0
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emj_A 10 EKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred CCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5789999999999876544 34432 245677886
No 134
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=58.58 E-value=4.1 Score=31.51 Aligned_cols=23 Identities=4% Similarity=0.033 Sum_probs=16.7
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCC-Cccccc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFP-RCNHFG 205 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~-~CPv~G 205 (253)
++|..|||.|+-+ .... .||.=|
T Consensus 74 ~~C~~CG~~~e~~---------~~~~~~CP~Cg 97 (119)
T 2kdx_A 74 LECKDCSHVFKPN---------ALDYGVCEKCH 97 (119)
T ss_dssp EECSSSSCEECSC---------CSTTCCCSSSS
T ss_pred EEcCCCCCEEeCC---------CCCCCcCcccc
Confidence 6789999999863 2346 799833
No 135
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.14 E-value=6.7 Score=23.49 Aligned_cols=33 Identities=6% Similarity=-0.080 Sum_probs=22.7
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++.. .+...||+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (45)
T 2epu_A 10 QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG 45 (45)
T ss_dssp CCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred CcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence 5799999999999876544 444422 34567774
No 136
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=57.99 E-value=9.8 Score=27.45 Aligned_cols=50 Identities=16% Similarity=-0.031 Sum_probs=34.2
Q ss_pred cCCcccCCCCcccch-hhHhhhhhcC--CCCCCccccccccccccCcccccHhHhhHhHH
Q 025405 171 AEPVRRYQILQIYPR-FSFLPFCSLD--CYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLF 227 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek-~aI~~~i~~~--~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~ 227 (253)
.+|+.|..||..|.. ..+..+++.. .+...|++ |++.+.. -..|+++|+.
T Consensus 26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~-----~~~L~~H~~~ 78 (85)
T 2lv2_A 26 AECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYS-----SPGLTRHINK 78 (85)
T ss_dssp CTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESS-----HHHHHHHHHT
T ss_pred CCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCC-----HHHHHHhCcc
Confidence 678999999999975 4566666532 35578988 9875543 3456666543
No 137
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=57.78 E-value=4.2 Score=29.17 Aligned_cols=36 Identities=8% Similarity=-0.232 Sum_probs=21.0
Q ss_pred CcccCCCCcccchhh--Hhhhhhc------CCCCCCcccccccc
Q 025405 173 PVRRYQILQIYPRFS--FLPFCSL------DCYFPRCNHFGCQL 208 (253)
Q Consensus 173 Pv~s~~CgHvYek~a--I~~~i~~------~~~~~~CPv~GC~~ 208 (253)
=++|+.|||+|+-+. -.+=|.. -...-+||+-|.++
T Consensus 7 ~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~K 50 (70)
T 1dx8_A 7 KYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSPK 50 (70)
T ss_dssp CEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCBG
T ss_pred eEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCCH
Confidence 378999999998542 0000100 01234799977765
No 138
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=57.72 E-value=10 Score=26.24 Aligned_cols=51 Identities=18% Similarity=0.094 Sum_probs=31.8
Q ss_pred cCCcccCCCCcccch-hhHhhhhhcCC----CCCCccccccccccccCcccccHhHhhHhHHH
Q 025405 171 AEPVRRYQILQIYPR-FSFLPFCSLDC----YFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFM 228 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek-~aI~~~i~~~~----~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~ 228 (253)
+.|+.|..|+..|.. ..+..+++... +...||+ |...+ ..-..|+++|+.+
T Consensus 33 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~--C~~~f-----~~~~~L~~H~~~~ 88 (95)
T 2yt9_A 33 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS--CGKGF-----SRPDHLNGHIKQV 88 (95)
T ss_dssp SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSS--SCCCB-----SSHHHHHHHHHHT
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCC--ccchh-----CCHHHHHHHHHHh
Confidence 467888899988865 44555554221 4578887 87643 3344566776544
No 139
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=57.25 E-value=7.3 Score=24.69 Aligned_cols=48 Identities=13% Similarity=0.049 Sum_probs=30.5
Q ss_pred CCcccCCCCcccch-hhHhhhhhcC--CCCCCccccccccccccCcccccHhHhhHhH
Q 025405 172 EPVRRYQILQIYPR-FSFLPFCSLD--CYFPRCNHFGCQLYFNWKKCVFKYHLKGHML 226 (253)
Q Consensus 172 ~Pv~s~~CgHvYek-~aI~~~i~~~--~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~ 226 (253)
.|+.|..||..|.. ..+..+++.. .+...||. |+..+.. -..|.++++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~-----~~~l~~H~~ 51 (60)
T 2adr_A 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTR-----RDLLIRHAQ 51 (60)
T ss_dssp CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESS-----HHHHHHHHT
T ss_pred CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCC-----HHHHHHHHH
Confidence 37889999999975 4455566532 34567988 8875432 334555543
No 140
>2kkx_A Uncharacterized protein ECS2156; methods development, U-box domain, structural genomics, PSI- protein structure initiative; NMR {Escherichia coli} PDB: 2kky_A
Probab=56.96 E-value=5.6 Score=30.70 Aligned_cols=36 Identities=11% Similarity=0.192 Sum_probs=23.2
Q ss_pred cccCCCCcccc---ccccCCcccCCCCcccchhhHhhhhh
Q 025405 157 NISCPLSGKPI---TELAEPVRRYQILQIYPRFSFLPFCS 193 (253)
Q Consensus 157 n~~CPlT~~~i---~~l~~Pv~s~~CgHvYek~aI~~~i~ 193 (253)
.++||||+-.- +.++|-.-|..|. -||+.|+.++++
T Consensus 27 ~l~CPITL~~PE~GVFvkNs~~S~VCs-LyD~~Al~~Lv~ 65 (102)
T 2kkx_A 27 AIQCPITLEQPEKGIFVKNSDGSDVCT-LFDAAAFSRLVG 65 (102)
T ss_dssp GGCBTTTTBCCSEEEEEEETTTTSEEE-EEEHHHHHHHHH
T ss_pred HcCCCeEEeeCCcceEEecCCCCccce-ecCHHHHHHHHh
Confidence 78999997210 0122233344553 599999999997
No 141
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=56.90 E-value=4.9 Score=30.44 Aligned_cols=47 Identities=15% Similarity=0.289 Sum_probs=33.0
Q ss_pred ccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCccc
Q 025405 158 ISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCV 216 (253)
Q Consensus 158 ~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~ 216 (253)
.+||+..+++ .. ..+|....+...|. .-.+.||..||+..+.++++.
T Consensus 54 ~~CP~Cr~~~-------~~---~~~~~~~~l~~~i~--~l~v~C~n~gC~~~~~~~~l~ 100 (118)
T 3hct_A 54 HKCPVDNEIL-------LE---NQLFPDNFAKREIL--SLMVKCPNEGCLHKMELRHLE 100 (118)
T ss_dssp SBCTTTCCBC-------CG---GGCEECHHHHHHHH--TSEEECSSTTCCCEEEGGGSG
T ss_pred CCCCCCCCCc-------CH---HhcccCHHHHHHHc--cceeECCCCCCCCEEeeHHHH
Confidence 3788887653 11 22444456667775 567899999999999888876
No 142
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.66 E-value=10 Score=22.68 Aligned_cols=33 Identities=9% Similarity=-0.016 Sum_probs=22.5
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++.. .+...||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq1_A 10 EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 45 (46)
T ss_dssp SCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred CCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5789999999999875544 455422 34567875
No 143
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.41 E-value=8.5 Score=22.97 Aligned_cols=33 Identities=9% Similarity=-0.092 Sum_probs=22.8
Q ss_pred cCCcccCCCCcccchhhHhh-hhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFLP-FCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~-~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|....-+. +++.. .+...||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytf_A 10 EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred CCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 57899999999998765544 44422 34567876
No 144
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=56.17 E-value=13 Score=24.56 Aligned_cols=50 Identities=16% Similarity=0.180 Sum_probs=33.6
Q ss_pred cCCcccCCCCcccchhhH-hhhhhcC--CCCCCccccccccccccCcccccHhHhhHhHH
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCSLD--CYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLF 227 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~~~--~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~ 227 (253)
+.|++|..|+..|....- ..+++.. .+..+||+ |...+. .-..|+++|+.
T Consensus 12 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~-----~~~~L~~H~~~ 64 (72)
T 1x6e_A 12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFS-----QNSGLINHQRI 64 (72)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEES-----SHHHHHHHHHH
T ss_pred CCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccC-----CHHHHHHHHHh
Confidence 579999999999976554 4455422 35678998 887443 33456666654
No 145
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=55.86 E-value=6.3 Score=20.63 Aligned_cols=17 Identities=12% Similarity=0.042 Sum_probs=13.1
Q ss_pred CcccCCCCcccchhhHh
Q 025405 173 PVRRYQILQIYPRFSFL 189 (253)
Q Consensus 173 Pv~s~~CgHvYek~aI~ 189 (253)
|+.|..||..|...+-+
T Consensus 2 ~~~C~~C~~~f~~~~~l 18 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHL 18 (29)
T ss_dssp CCBCTTTCCBCSSHHHH
T ss_pred CeECCCCCcccCCHHHH
Confidence 78888999998775543
No 146
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=55.70 E-value=6 Score=22.39 Aligned_cols=20 Identities=15% Similarity=0.200 Sum_probs=15.5
Q ss_pred cCCcccCCCCcccchhhHhh
Q 025405 171 AEPVRRYQILQIYPRFSFLP 190 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~ 190 (253)
+.|++|..||..|....-+.
T Consensus 9 ~k~~~C~~C~k~f~~~~~l~ 28 (37)
T 1p7a_A 9 IKPFQCPDCDRSFSRSDHLA 28 (37)
T ss_dssp SSSBCCTTTCCCBSSHHHHH
T ss_pred CCCccCCCCCcccCcHHHHH
Confidence 56899999999998765443
No 147
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.66 E-value=10 Score=22.73 Aligned_cols=33 Identities=6% Similarity=0.002 Sum_probs=22.4
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|++|..|+..|....-+ .+++. ..+..+||-
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoh_A 10 KKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45 (46)
T ss_dssp SCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5789999999999875544 44442 235567773
No 148
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.53 E-value=10 Score=22.58 Aligned_cols=33 Identities=9% Similarity=-0.078 Sum_probs=22.9
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|++|..||..|...+-+ .+++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~ 45 (46)
T 2yts_A 10 EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred CcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence 5789999999999876554 44442 234567876
No 149
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.53 E-value=8.4 Score=23.13 Aligned_cols=33 Identities=6% Similarity=-0.041 Sum_probs=23.1
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eoz_A 10 EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45 (46)
T ss_dssp CCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred CCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5789999999999876544 34432 235677885
No 150
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.84 E-value=10 Score=22.71 Aligned_cols=33 Identities=6% Similarity=-0.073 Sum_probs=23.2
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...||+
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em3_A 10 EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred CcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5689999999999876654 34442 235577876
No 151
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.73 E-value=12 Score=22.37 Aligned_cols=33 Identities=6% Similarity=-0.154 Sum_probs=22.5
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|++|..||..|....-+ .+++.. .+...||.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em6_A 10 EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5789999999999865544 445422 34567875
No 152
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=54.62 E-value=6.2 Score=20.42 Aligned_cols=16 Identities=6% Similarity=-0.184 Sum_probs=11.4
Q ss_pred CcccCCCCcccchhhH
Q 025405 173 PVRRYQILQIYPRFSF 188 (253)
Q Consensus 173 Pv~s~~CgHvYek~aI 188 (253)
|+.|..||..|....-
T Consensus 1 ~~~C~~C~k~f~~~~~ 16 (27)
T 1znf_A 1 XYKCGLCERSFVEKSA 16 (27)
T ss_dssp -CBCSSSCCBCSSHHH
T ss_pred CccCCCCCCcCCCHHH
Confidence 6778889999876543
No 153
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.35 E-value=8.6 Score=25.20 Aligned_cols=39 Identities=5% Similarity=-0.108 Sum_probs=27.7
Q ss_pred cCCcccCCCCcccchhhHhhhhhc-CCCCCCcccccccccc
Q 025405 171 AEPVRRYQILQIYPRFSFLPFCSL-DCYFPRCNHFGCQLYF 210 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~~i~~-~~~~~~CPv~GC~~~l 210 (253)
..|+.|..||..|.+..+..+++. ..+...||. .|+..+
T Consensus 8 ~~~~~C~~C~k~f~~~~L~~H~~~~~~~p~~C~~-~C~k~f 47 (66)
T 2eod_A 8 KRTQPCTYCTKEFVFDTIQSHQYQCPRLPVACPN-QCGVGT 47 (66)
T ss_dssp CCEEECSSSCCEEEHHHHHHHHHHCSSSEEECTT-CCSCCE
T ss_pred CCCeeccccCCccCHHHHHHHHHHcCCcCccCCc-ccCccc
Confidence 458999999999997777777753 234467882 388753
No 154
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=54.17 E-value=24 Score=24.79 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=28.9
Q ss_pred cCCcccCCCCcccch-hhHhhhhhcC--CCCCCccccccccccccCcccccHhHhhHhH
Q 025405 171 AEPVRRYQILQIYPR-FSFLPFCSLD--CYFPRCNHFGCQLYFNWKKCVFKYHLKGHML 226 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek-~aI~~~i~~~--~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~ 226 (253)
..|+.|..|+..|.. ..+..+++.. .+..+|++ |...+ ..-..|+++++
T Consensus 43 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f-----~~~~~L~~H~~ 94 (106)
T 2ee8_A 43 ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQE--CGKGF-----CQSRTLAVHKT 94 (106)
T ss_dssp SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSS--SCCCC-----SSHHHHHHHHH
T ss_pred CCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCC--cCCcc-----cCHHHHHHHHH
Confidence 367888888888854 3445555422 24467887 77533 23344556654
No 155
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=54.17 E-value=6.3 Score=26.10 Aligned_cols=41 Identities=12% Similarity=0.066 Sum_probs=28.2
Q ss_pred cCCcccCC--CCcccchh-hHhhhhhc--CCCCCCccccccccccc
Q 025405 171 AEPVRRYQ--ILQIYPRF-SFLPFCSL--DCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 171 ~~Pv~s~~--CgHvYek~-aI~~~i~~--~~~~~~CPv~GC~~~l~ 211 (253)
..|+.|.. |+..|... .+..+++. ..+..+|++.+|...+.
T Consensus 15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~ 60 (72)
T 2epa_A 15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFA 60 (72)
T ss_dssp CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEES
T ss_pred cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccC
Confidence 45777777 99999754 44455542 24567899989997554
No 156
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=54.05 E-value=2.8 Score=31.54 Aligned_cols=49 Identities=20% Similarity=0.321 Sum_probs=30.7
Q ss_pred cccCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCccc
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCV 216 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~ 216 (253)
+..||+..+++.. .+... .-..+.+.|. .-.+.||..||...+.++++.
T Consensus 58 ~~~CP~Cr~~~~~-~~~~~--------~~~~l~~~i~--~l~v~C~~~gC~~~~~~~~~~ 106 (116)
T 1rmd_A 58 GSYCPSCRYPCFP-TDLES--------PVKSFLNILN--SLMVKCPAQDCNEEVSLEKYN 106 (116)
T ss_dssp CSBCTTTCCBCCG-GGCBC--------CCHHHHHHHH--HCEEECCSTTCCCEEEHHHHH
T ss_pred cCcCCCCCCCCCH-hhccc--------cHHHHHHHHH--HhcCCCCCCCCcchhhHhHHH
Confidence 4568988766421 11111 1244566664 456889999999988877665
No 157
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.96 E-value=12 Score=22.12 Aligned_cols=33 Identities=3% Similarity=-0.270 Sum_probs=22.1
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...|++
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 43 (43)
T 2yrm_A 8 NGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG 43 (43)
T ss_dssp SCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred CCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence 5689999999999876544 44432 234567764
No 158
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=53.75 E-value=8.2 Score=28.16 Aligned_cols=38 Identities=11% Similarity=0.024 Sum_probs=17.9
Q ss_pred CCcccCC--CCcccchhh-Hhhhhhc--CCCCCCccccccccc
Q 025405 172 EPVRRYQ--ILQIYPRFS-FLPFCSL--DCYFPRCNHFGCQLY 209 (253)
Q Consensus 172 ~Pv~s~~--CgHvYek~a-I~~~i~~--~~~~~~CPv~GC~~~ 209 (253)
.|+.|.. |+..|.... +..+++. ..+...||+.+|+..
T Consensus 61 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~ 103 (124)
T 1ubd_C 61 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKK 103 (124)
T ss_dssp CCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCC
T ss_pred CCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCc
Confidence 4555543 666664332 2233321 123455666566653
No 159
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=53.74 E-value=4.3 Score=30.09 Aligned_cols=36 Identities=14% Similarity=-0.214 Sum_probs=21.4
Q ss_pred CcccCCCCcccchhh--Hhhhhhc------CCCCCCcccccccc
Q 025405 173 PVRRYQILQIYPRFS--FLPFCSL------DCYFPRCNHFGCQL 208 (253)
Q Consensus 173 Pv~s~~CgHvYek~a--I~~~i~~------~~~~~~CPv~GC~~ 208 (253)
=++|..||++|+-+. -.+=|.. -...-+||+-|.++
T Consensus 27 ~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~K 70 (81)
T 2kn9_A 27 LFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAK 70 (81)
T ss_dssp EEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCCG
T ss_pred eEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCCH
Confidence 488999999998532 0011110 01234799977765
No 160
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=53.64 E-value=4.4 Score=29.03 Aligned_cols=36 Identities=11% Similarity=0.091 Sum_probs=23.8
Q ss_pred cccCCCCccccccc--cCCcccCCCCcccc-hhhHhhhh
Q 025405 157 NISCPLSGKPITEL--AEPVRRYQILQIYP-RFSFLPFC 192 (253)
Q Consensus 157 n~~CPlT~~~i~~l--~~Pv~s~~CgHvYe-k~aI~~~i 192 (253)
-+.||.++.++..- +.-+.|+.||..|. ++.|-.++
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~dGIPvmL 46 (70)
T 2js4_A 8 ILVCPVCKGRLEFQRAQAELVCNADRLAFPVRDGVPIML 46 (70)
T ss_dssp CCBCTTTCCBEEEETTTTEEEETTTTEEEEEETTEECCC
T ss_pred heECCCCCCcCEEeCCCCEEEcCCCCceecCCCCeeeeC
Confidence 35799999886433 23467888999986 34444444
No 161
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.61 E-value=13 Score=22.18 Aligned_cols=33 Identities=9% Similarity=0.057 Sum_probs=22.8
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++.. .+...||+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytn_A 10 KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred CcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence 5789999999999876654 344422 34567875
No 162
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=53.16 E-value=9.9 Score=25.51 Aligned_cols=49 Identities=14% Similarity=0.147 Sum_probs=32.5
Q ss_pred cCCcccCCCCcccchh-hHhhhhhcC--CCCCCccccccccccccCcccccHhHhhHhH
Q 025405 171 AEPVRRYQILQIYPRF-SFLPFCSLD--CYFPRCNHFGCQLYFNWKKCVFKYHLKGHML 226 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~-aI~~~i~~~--~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~ 226 (253)
+.|+.|..|+..|... .+..+++.. .+...||+ |...+.. -..|+++++
T Consensus 16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~-----~~~L~~H~~ 67 (77)
T 2cot_A 16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQ-----RSHLIGHHR 67 (77)
T ss_dssp SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESS-----HHHHHHHGG
T ss_pred CCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCC-----HHHHHHHHH
Confidence 6799999999999754 445556522 34578998 8875432 344666654
No 163
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=53.05 E-value=14 Score=24.61 Aligned_cols=52 Identities=21% Similarity=0.184 Sum_probs=33.8
Q ss_pred cCCcccCC--CCcccchh-hHhhhhh-c--CCCCCCccccccccccccCcccccHhHhhHhHH
Q 025405 171 AEPVRRYQ--ILQIYPRF-SFLPFCS-L--DCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLF 227 (253)
Q Consensus 171 ~~Pv~s~~--CgHvYek~-aI~~~i~-~--~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~ 227 (253)
..|+.+.. |+..|... .+..+++ . ..+...||+.||+..+.. -..|+++|+.
T Consensus 5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~-----~~~L~~H~~~ 62 (79)
T 2dlk_A 5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNF-----KKHLKEHMKL 62 (79)
T ss_dssp CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESS-----HHHHHHHHHH
T ss_pred CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCC-----HHHHHHHHHH
Confidence 34677765 99999754 4555554 1 245678999999975443 3456777654
No 164
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.79 E-value=11 Score=22.51 Aligned_cols=33 Identities=9% Similarity=-0.094 Sum_probs=23.0
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|++|..||..|....-+ .+++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eow_A 10 EKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS 45 (46)
T ss_dssp CCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred CCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence 5789999999999876554 44442 235577875
No 165
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.24 E-value=13 Score=22.19 Aligned_cols=33 Identities=6% Similarity=-0.176 Sum_probs=22.4
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++.. .+...||.
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emi_A 10 ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred CCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence 5689999999999875544 444422 34567875
No 166
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=52.02 E-value=5.1 Score=30.03 Aligned_cols=42 Identities=2% Similarity=-0.204 Sum_probs=19.3
Q ss_pred CCcccCCCCcccchhhH-hhh-hhc--CCCCCCccccccccccccC
Q 025405 172 EPVRRYQILQIYPRFSF-LPF-CSL--DCYFPRCNHFGCQLYFNWK 213 (253)
Q Consensus 172 ~Pv~s~~CgHvYek~aI-~~~-i~~--~~~~~~CPv~GC~~~l~~~ 213 (253)
.|++|..||..|...+- ..+ .+. ..+...|++..+.+.....
T Consensus 49 kpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~~~~~~~e 94 (102)
T 2ghf_A 49 SSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKRNNQTIFE 94 (102)
T ss_dssp CCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCCSSCCCEE
T ss_pred CCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccCCCccchh
Confidence 35666666666644332 233 221 1234556665555543333
No 167
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.76 E-value=6.6 Score=22.13 Aligned_cols=23 Identities=13% Similarity=-0.041 Sum_probs=16.9
Q ss_pred cCCcccCCCCcccchhhHh-hhhh
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~ 193 (253)
+.|+.|..|+..|...+.+ .+++
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elq_A 7 GKPFKCSLCEYATRSKSNLKAHMN 30 (36)
T ss_dssp CCSEECSSSSCEESCHHHHHHHHH
T ss_pred CCCccCCCCCchhCCHHHHHHHHH
Confidence 5689999999999775544 3443
No 168
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=51.73 E-value=13 Score=21.65 Aligned_cols=32 Identities=13% Similarity=0.030 Sum_probs=21.2
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCcc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCN 202 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CP 202 (253)
+.|+.|..||..|...+-+ .+++.. .+..+||
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 42 (42)
T 2el5_A 8 ENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG 42 (42)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred CCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence 5689999999999876544 344422 2445665
No 169
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=51.48 E-value=3.8 Score=37.49 Aligned_cols=68 Identities=16% Similarity=0.025 Sum_probs=34.4
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCccc------cccccccccCcc-----cccHhHhhHhHHHHhhccCCCeEEEec
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNH------FGCQLYFNWKKC-----VFKYHLKGHMLFMQVLEYDGDIYLLGL 242 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv------~GC~~~l~~~dL-----~~D~~l~~~~~~~~~~~~~~~~~~~~~ 242 (253)
++|..|++.|+++.+...+........|++ ..|...|+.+=+ .|+..+.+....+ ..-|+.|+
T Consensus 139 ~~C~~C~~~~~~~~~~~~~~~~p~~~~C~~~~~~~c~~CgG~LRPdVV~FGE~lP~~~~~~a~~~~----~~aDllLV-- 212 (318)
T 3k35_A 139 EECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALADEAS----RNADLSIT-- 212 (318)
T ss_dssp EEETTTCCEEECSSCCSCCSSCEEEEECCC--------CCCEEEECCCCTTCCCCHHHHHHHHHHH----HTCSEEEE--
T ss_pred eEeCCCCCccchHHhhhhcccCCCCCcCcccccccccCcCCeeCCCEEEccCcCCHHHHHHHHHHH----hcCCEEEE--
Confidence 578899999998766543320111124653 246654443222 2444444443322 34676654
Q ss_pred ccCCcc
Q 025405 243 ASGTSL 248 (253)
Q Consensus 243 ~~~~~~ 248 (253)
.||||
T Consensus 213 -iGTSL 217 (318)
T 3k35_A 213 -LGTSL 217 (318)
T ss_dssp -ESCCC
T ss_pred -EccCC
Confidence 46665
No 170
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=51.43 E-value=13 Score=22.13 Aligned_cols=33 Identities=9% Similarity=-0.016 Sum_probs=22.8
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|++|..||..|....-+ .+++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ema_A 10 EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45 (46)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred CcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 5789999999999876544 44442 235567875
No 171
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=50.84 E-value=7 Score=21.62 Aligned_cols=19 Identities=11% Similarity=-0.134 Sum_probs=15.0
Q ss_pred cCCcccCCCCcccchhhHh
Q 025405 171 AEPVRRYQILQIYPRFSFL 189 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~ 189 (253)
+.|+.|..||..|...+-+
T Consensus 5 ~k~~~C~~C~k~f~~~~~L 23 (35)
T 2elx_A 5 SSGYVCALCLKKFVSSIRL 23 (35)
T ss_dssp CCSEECSSSCCEESSHHHH
T ss_pred CCCeECCCCcchhCCHHHH
Confidence 5689999999999875544
No 172
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=50.62 E-value=6.2 Score=28.35 Aligned_cols=48 Identities=10% Similarity=-0.018 Sum_probs=24.7
Q ss_pred CCcccCCCCcccchhh-Hhhhhh-cCCCCCCccccccccccccCcccccHhHhhHhH
Q 025405 172 EPVRRYQILQIYPRFS-FLPFCS-LDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHML 226 (253)
Q Consensus 172 ~Pv~s~~CgHvYek~a-I~~~i~-~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~ 226 (253)
.|+.|..|+..|.... +..++. ...+...|++ |...+ ..-..|+++++
T Consensus 41 ~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~--C~~~f-----~~~~~L~~H~~ 90 (107)
T 1wjp_A 41 NAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLE--CMRTF-----KSSFSIWRHQV 90 (107)
T ss_dssp HSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGG--GTEEC-----SSHHHHHHHHH
T ss_pred CCccCCCCCCccCCHHHHHHHHHcCCCCCccCcc--ccchh-----CCHHHHHHHHH
Confidence 4677777777775433 223332 1123456776 66533 23344555554
No 173
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.46 E-value=7.1 Score=22.00 Aligned_cols=20 Identities=0% Similarity=-0.420 Sum_probs=15.9
Q ss_pred cCCcccCCCCcccchhhHhh
Q 025405 171 AEPVRRYQILQIYPRFSFLP 190 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~ 190 (253)
+.|+.|..||..|...+-+.
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~ 26 (36)
T 2elv_A 7 GLLYDCHICERKFKNELDRD 26 (36)
T ss_dssp CCCEECSSSCCEESSHHHHH
T ss_pred CCCeECCCCCCccCCHHHHH
Confidence 56899999999998766543
No 174
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=50.42 E-value=10 Score=23.58 Aligned_cols=37 Identities=11% Similarity=0.023 Sum_probs=25.0
Q ss_pred CcccCCCCcccchhh-HhhhhhcC--CCCCCccccccccccc
Q 025405 173 PVRRYQILQIYPRFS-FLPFCSLD--CYFPRCNHFGCQLYFN 211 (253)
Q Consensus 173 Pv~s~~CgHvYek~a-I~~~i~~~--~~~~~CPv~GC~~~l~ 211 (253)
|+.|..||..|.... +..+++.. .+...||+ |+..+.
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~ 40 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFK 40 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEES
T ss_pred CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhc
Confidence 788999999997544 44555432 34567988 887443
No 175
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.26 E-value=15 Score=21.81 Aligned_cols=33 Identities=6% Similarity=-0.099 Sum_probs=22.2
Q ss_pred cCCcccCCCCcccchhhHhh-hhh-cC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFLP-FCS-LD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~-~i~-~~--~~~~~CPv 203 (253)
+.|+.|..||..|....-+. +++ .. .+..+|++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~ 46 (47)
T 2epx_A 10 KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46 (47)
T ss_dssp CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred CCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence 56899999999998766543 443 22 34466764
No 176
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.25 E-value=13 Score=22.04 Aligned_cols=33 Identities=9% Similarity=-0.027 Sum_probs=22.7
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++.. .+...||+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yrj_A 10 EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred CCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999876544 445422 34567875
No 177
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=50.00 E-value=16 Score=26.95 Aligned_cols=50 Identities=10% Similarity=-0.013 Sum_probs=32.9
Q ss_pred cCCcccCCCCcccchhh-HhhhhhcCCCCCCccccccccccccCcccccHhHhhHhHH
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCSLDCYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLF 227 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~~~~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~ 227 (253)
+.|+.|..||..|.... +..+++...+...|++ |+..+. .-..|+++++.
T Consensus 72 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~--C~k~f~-----~~~~l~~H~~~ 122 (129)
T 2wbt_A 72 ISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPV--CKKEFT-----STDSALDHVCK 122 (129)
T ss_dssp HCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTT--TCCBCS-----SHHHHHHHHHH
T ss_pred CCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCC--CCcccC-----CHHHHHHHHHH
Confidence 46889999999997654 4455553345678998 887543 33446666553
No 178
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.60 E-value=16 Score=21.59 Aligned_cols=33 Identities=9% Similarity=-0.104 Sum_probs=22.3
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++.. .+...||+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eop_A 10 EKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45 (46)
T ss_dssp CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred CCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999876554 344422 34567775
No 179
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=48.29 E-value=7.8 Score=21.56 Aligned_cols=23 Identities=9% Similarity=0.010 Sum_probs=16.5
Q ss_pred cCCcccCCCCcccchhh-Hhhhhh
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~ 193 (253)
+.|+.|..||..|...+ +..+++
T Consensus 5 ~k~~~C~~C~k~f~~~~~l~~H~~ 28 (35)
T 1srk_A 5 KRPFVCRICLSAFTTKANCARHLK 28 (35)
T ss_dssp CSCEECSSSCCEESSHHHHHHHHG
T ss_pred CcCeeCCCCCcccCCHHHHHHHHH
Confidence 56899999999997654 344443
No 180
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.20 E-value=17 Score=21.75 Aligned_cols=33 Identities=6% Similarity=-0.123 Sum_probs=22.4
Q ss_pred cCCcccCCCCcccchhhH-hhhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~~--~~~~~~CPv 203 (253)
+.|++|..|+..|....- ..+++. ..+..+|++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eom_A 10 ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred CCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence 568999999999987544 444442 235567764
No 181
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=48.15 E-value=7.5 Score=23.71 Aligned_cols=19 Identities=11% Similarity=-0.125 Sum_probs=16.0
Q ss_pred cCCcccCCCCcccchhhHh
Q 025405 171 AEPVRRYQILQIYPRFSFL 189 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~ 189 (253)
+.|+.|..||..|...+-+
T Consensus 6 ekp~~C~~CgK~F~~~s~L 24 (36)
T 1fv5_A 6 PARFMCLPCGIAFSSPSTL 24 (36)
T ss_dssp CCCCEETTTTEECSCHHHH
T ss_pred ccCeECCCCCCccCCHhHc
Confidence 6799999999999876544
No 182
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=48.09 E-value=9.5 Score=19.71 Aligned_cols=15 Identities=0% Similarity=-0.073 Sum_probs=11.2
Q ss_pred CcccCCCCcccchhh
Q 025405 173 PVRRYQILQIYPRFS 187 (253)
Q Consensus 173 Pv~s~~CgHvYek~a 187 (253)
|+.|..||..|...+
T Consensus 2 ~~~C~~C~~~f~~~~ 16 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVG 16 (29)
T ss_dssp CCCCSSCCCCCCTTT
T ss_pred CCcCCCCCcccCCHH
Confidence 778888888886543
No 183
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=48.08 E-value=4.1 Score=37.88 Aligned_cols=18 Identities=11% Similarity=-0.066 Sum_probs=14.1
Q ss_pred cccCCCCcccchhhHhhh
Q 025405 174 VRRYQILQIYPRFSFLPF 191 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~ 191 (253)
++|..|++.|.++.+...
T Consensus 139 ~~C~~C~~~~~~~~~~~~ 156 (355)
T 3pki_A 139 EECAKCKTQYVRDTVVGT 156 (355)
T ss_dssp EEETTTCCEEEBSSCCSC
T ss_pred eeeCCCCCccchHHhhhh
Confidence 578899999998766543
No 184
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=48.04 E-value=9.6 Score=26.31 Aligned_cols=37 Identities=14% Similarity=0.182 Sum_probs=21.2
Q ss_pred CCcccCCCCcccch-hhHhhhhhc--CCCCCCcccccccccc
Q 025405 172 EPVRRYQILQIYPR-FSFLPFCSL--DCYFPRCNHFGCQLYF 210 (253)
Q Consensus 172 ~Pv~s~~CgHvYek-~aI~~~i~~--~~~~~~CPv~GC~~~l 210 (253)
.|+.|..||..|.. ..+..+++. ..+...||+ |+..+
T Consensus 2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f 41 (88)
T 1llm_C 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKF 41 (88)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEE
T ss_pred CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCC--CCCcc
Confidence 47777778777754 334444432 134466776 76543
No 185
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.03 E-value=17 Score=21.63 Aligned_cols=33 Identities=6% Similarity=-0.073 Sum_probs=22.5
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++.. .+..+|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2epz_A 10 EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45 (46)
T ss_dssp CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred CCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5789999999999876544 444422 34567775
No 186
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=47.85 E-value=9.1 Score=20.21 Aligned_cols=19 Identities=5% Similarity=-0.026 Sum_probs=13.6
Q ss_pred CcccCCCCcccchhh-Hhhh
Q 025405 173 PVRRYQILQIYPRFS-FLPF 191 (253)
Q Consensus 173 Pv~s~~CgHvYek~a-I~~~ 191 (253)
|+.|..||..|.... +..+
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H 21 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRH 21 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHH
T ss_pred CcCCcccCcccCChHHHHHH
Confidence 788889999987644 3344
No 187
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.82 E-value=15 Score=21.79 Aligned_cols=33 Identities=9% Similarity=-0.100 Sum_probs=22.4
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|++|..||..|....-+ .+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eq4_A 10 EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS 45 (46)
T ss_dssp CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred CCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence 5689999999999876544 344422 34567775
No 188
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.74 E-value=10 Score=21.14 Aligned_cols=22 Identities=0% Similarity=-0.235 Sum_probs=15.8
Q ss_pred cCCcccCCCCcccchhh-Hhhhh
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFC 192 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i 192 (253)
+.|+.|..||..|.... +..++
T Consensus 7 ~~~~~C~~C~k~f~~~~~l~~H~ 29 (36)
T 2elr_A 7 GKTHLCDMCGKKFKSKGTLKSHK 29 (36)
T ss_dssp CSSCBCTTTCCBCSSHHHHHHHH
T ss_pred CCCeecCcCCCCcCchHHHHHHH
Confidence 56899999999997654 33443
No 189
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.71 E-value=20 Score=21.29 Aligned_cols=33 Identities=12% Similarity=-0.082 Sum_probs=22.4
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+..+|++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2elz_A 10 EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 45 (46)
T ss_dssp CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred CCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 5689999999999875544 44442 234567775
No 190
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.69 E-value=14 Score=21.96 Aligned_cols=33 Identities=9% Similarity=0.064 Sum_probs=22.7
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|++|..||..|...+-+ .+++. ..+...||+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytk_A 10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45 (46)
T ss_dssp SCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred CCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence 5789999999999876544 34432 235567876
No 191
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=47.59 E-value=18 Score=21.44 Aligned_cols=33 Identities=6% Similarity=-0.137 Sum_probs=22.5
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em0_A 10 EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 45 (46)
T ss_dssp CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred CcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence 5689999999999876544 34442 234567875
No 192
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.53 E-value=15 Score=21.92 Aligned_cols=33 Identities=6% Similarity=-0.013 Sum_probs=22.8
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|++|..||..|....-+ .+++. ..+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em2_A 10 EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred CCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5689999999999876544 34432 235577876
No 193
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.42 E-value=8.6 Score=21.45 Aligned_cols=19 Identities=16% Similarity=-0.045 Sum_probs=15.1
Q ss_pred cCCcccCCCCcccchhhHh
Q 025405 171 AEPVRRYQILQIYPRFSFL 189 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~ 189 (253)
+.|+.|..||..|...+-+
T Consensus 7 ~k~~~C~~C~k~f~~~~~l 25 (36)
T 2elt_A 7 GKPYKCPQCSYASAIKANL 25 (36)
T ss_dssp CCSEECSSSSCEESSHHHH
T ss_pred CCCCCCCCCCcccCCHHHH
Confidence 5689999999999875543
No 194
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=47.41 E-value=5 Score=34.57 Aligned_cols=32 Identities=16% Similarity=-0.074 Sum_probs=14.1
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCccccccccccc
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
++|..|++.|+.+.. +. ....++|| +|...|+
T Consensus 114 ~~C~~C~~~~~~~~~---~~-~~~~p~c~--~Cgg~lr 145 (235)
T 1s5p_A 114 VRCSQSGQVLDWTGD---VT-PEDKCHCC--QFPAPLR 145 (235)
T ss_dssp EEETTTCCEEECCSC---CC-SSCCC---------CEE
T ss_pred EEeCCCCCcccchhh---cc-CCCCCCCC--CCCCeec
Confidence 567789999886531 32 22233444 6876544
No 195
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.34 E-value=18 Score=21.44 Aligned_cols=33 Identities=9% Similarity=-0.128 Sum_probs=22.2
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...|++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoq_A 10 EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS 45 (46)
T ss_dssp SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred CCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999775544 34432 234567775
No 196
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.34 E-value=14 Score=21.97 Aligned_cols=33 Identities=12% Similarity=0.060 Sum_probs=22.7
Q ss_pred cCCcccCCCCcccchhhHhh-hhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFLP-FCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~-~i~~~--~~~~~CPv 203 (253)
+.|++|..||..|...+-+. +++.. .+..+|++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq0_A 10 EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 45 (46)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 57899999999998766544 44422 34567775
No 197
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.28 E-value=13 Score=22.16 Aligned_cols=33 Identities=15% Similarity=0.031 Sum_probs=22.7
Q ss_pred cCCcccCCCCcccchhhHhh-hhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFLP-FCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~-~i~~--~~~~~~CPv 203 (253)
+.|+.|..|+..|....-+. +++. ..+...|+.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emz_A 10 ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45 (46)
T ss_dssp CCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 57899999999998766543 3431 245677875
No 198
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.92 E-value=17 Score=21.56 Aligned_cols=33 Identities=9% Similarity=-0.007 Sum_probs=22.2
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytr_A 10 EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 5789999999999876544 444422 24466765
No 199
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.84 E-value=17 Score=21.68 Aligned_cols=33 Identities=3% Similarity=-0.104 Sum_probs=22.2
Q ss_pred cCCcccCCCCcccchhhH-hhhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|....- ..+++.. .+..+||.
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2enh_A 10 EKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45 (46)
T ss_dssp SSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568999999999987554 4455422 24566764
No 200
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=46.75 E-value=9.4 Score=19.90 Aligned_cols=20 Identities=5% Similarity=-0.292 Sum_probs=13.6
Q ss_pred CcccCCCCcccchhh-Hhhhh
Q 025405 173 PVRRYQILQIYPRFS-FLPFC 192 (253)
Q Consensus 173 Pv~s~~CgHvYek~a-I~~~i 192 (253)
|+.|..||..|...+ +..++
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~ 22 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTHI 22 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHH
Confidence 778888999886643 33444
No 201
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.74 E-value=15 Score=21.91 Aligned_cols=33 Identities=12% Similarity=-0.011 Sum_probs=22.7
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ep3_A 10 EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5789999999999876554 445422 34567875
No 202
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=46.64 E-value=12 Score=26.31 Aligned_cols=26 Identities=12% Similarity=-0.029 Sum_probs=18.8
Q ss_pred CcccCCCCcccchhhHhhhhhcCCCCCCcccccccc
Q 025405 173 PVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQL 208 (253)
Q Consensus 173 Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~ 208 (253)
.++|-.||+.++ |. ....++||. |.+
T Consensus 21 ~Y~C~~Cg~~~~-------l~-~~~~iRC~~--CG~ 46 (63)
T 3h0g_L 21 IYLCADCGARNT-------IQ-AKEVIRCRE--CGH 46 (63)
T ss_dssp CCBCSSSCCBCC-------CC-SSSCCCCSS--SCC
T ss_pred EEECCCCCCeee-------cC-CCCceECCC--CCc
Confidence 478889999998 32 346789997 554
No 203
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.51 E-value=8.5 Score=21.70 Aligned_cols=19 Identities=0% Similarity=-0.085 Sum_probs=15.0
Q ss_pred cCCcccCCCCcccchhhHh
Q 025405 171 AEPVRRYQILQIYPRFSFL 189 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~ 189 (253)
+.|+.|..||..|...+-+
T Consensus 7 ~k~~~C~~C~k~f~~~~~l 25 (37)
T 2elo_A 7 GRSYSCPVCEKSFSEDRLI 25 (37)
T ss_dssp CCCCEETTTTEECSSHHHH
T ss_pred CCCcCCCCCCCccCCHHHH
Confidence 5689999999999875443
No 204
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.50 E-value=17 Score=21.56 Aligned_cols=33 Identities=9% Similarity=0.080 Sum_probs=22.7
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|++|..||..|...+-+ .+++. ..+...||+
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eoe_A 10 EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS 45 (46)
T ss_dssp CCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred CCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999876654 34442 234567775
No 205
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=46.15 E-value=5.2 Score=27.02 Aligned_cols=35 Identities=14% Similarity=-0.267 Sum_probs=20.5
Q ss_pred cccCCCCcccchhh--Hhhhhhc------CCCCCCcccccccc
Q 025405 174 VRRYQILQIYPRFS--FLPFCSL------DCYFPRCNHFGCQL 208 (253)
Q Consensus 174 v~s~~CgHvYek~a--I~~~i~~------~~~~~~CPv~GC~~ 208 (253)
++|..|||+|+-+. -.+=|.. -...-+||+-|.++
T Consensus 3 ~~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~K 45 (52)
T 1yk4_A 3 LSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAPK 45 (52)
T ss_dssp EEESSSSCEEETTTCBGGGTBCTTCCGGGSCTTCBCTTTCCBG
T ss_pred EEeCCCCeEECCCcCCcccCcCCCCCHhHCCCCCcCCCCCCCH
Confidence 57899999998641 1111110 11335799977665
No 206
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=46.08 E-value=16 Score=21.61 Aligned_cols=33 Identities=12% Similarity=-0.073 Sum_probs=22.8
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++.. .+...||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2el4_A 10 VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS 45 (46)
T ss_dssp CCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred CCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5789999999999876554 445422 34567875
No 207
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.92 E-value=20 Score=21.33 Aligned_cols=33 Identities=9% Similarity=-0.036 Sum_probs=22.4
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++.. .+..+|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytq_A 10 EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS 45 (46)
T ss_dssp CCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred CCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence 5789999999999876544 444422 34567775
No 208
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.75 E-value=18 Score=21.64 Aligned_cols=33 Identities=9% Similarity=-0.067 Sum_probs=22.7
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+..+|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytm_A 10 EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45 (46)
T ss_dssp CCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred CCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999876554 34431 245567875
No 209
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.72 E-value=16 Score=21.75 Aligned_cols=33 Identities=9% Similarity=-0.085 Sum_probs=22.8
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emy_A 10 ENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45 (46)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred CcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence 5789999999999876554 34432 235567875
No 210
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.55 E-value=18 Score=21.52 Aligned_cols=33 Identities=6% Similarity=-0.172 Sum_probs=22.4
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|++|..||..|....-+ .+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em7_A 10 EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred CcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5689999999999876544 444422 34567775
No 211
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.49 E-value=16 Score=21.78 Aligned_cols=33 Identities=9% Similarity=-0.088 Sum_probs=22.6
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|++|..||..|....-+ .+++.. .+..+||+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emf_A 10 GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45 (46)
T ss_dssp SCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred CCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5689999999999876544 445422 34567775
No 212
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=45.35 E-value=19 Score=21.46 Aligned_cols=33 Identities=15% Similarity=0.018 Sum_probs=22.4
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|++|..||..|....-+ .+++. ..+..+|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ely_A 10 EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45 (46)
T ss_dssp CCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred CCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999875544 44442 235567775
No 213
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=45.29 E-value=6.7 Score=27.27 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=28.4
Q ss_pred Cccc-CCCCcccchhhHhhhhhc--CCCCCCccccccccccccCcc
Q 025405 173 PVRR-YQILQIYPRFSFLPFCSL--DCYFPRCNHFGCQLYFNWKKC 215 (253)
Q Consensus 173 Pv~s-~~CgHvYek~aI~~~i~~--~~~~~~CPv~GC~~~l~~~dL 215 (253)
||.+ ..||..+.|..+..++.. ....+.|+. |...+.+.+|
T Consensus 16 ~v~C~~~C~~~v~r~~l~~H~~~~C~~r~v~C~~--C~~~~~~~~l 59 (76)
T 2yuc_A 16 VIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CGCDFSGEAY 59 (76)
T ss_dssp CCBCTTCCSCBCCSSSSTTTTTTSCTTSCCCCSS--SCCCCCHHHH
T ss_pred ccCCCccccHHhhHhHHHhhCHhhCCCcceECCC--CCCccCHHHH
Confidence 5666 478888888888888862 134567777 7776665553
No 214
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.25 E-value=7.4 Score=22.35 Aligned_cols=19 Identities=11% Similarity=-0.279 Sum_probs=15.1
Q ss_pred cCCcccCCCCcccchhhHh
Q 025405 171 AEPVRRYQILQIYPRFSFL 189 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~ 189 (253)
+.|+.|..||..|...+-+
T Consensus 7 ~k~~~C~~C~k~f~~~~~L 25 (37)
T 2elm_A 7 GHLYYCSQCHYSSITKNCL 25 (37)
T ss_dssp SCEEECSSSSCEEECHHHH
T ss_pred CcCeECCCCCcccCCHHHH
Confidence 5689999999999765543
No 215
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.81 E-value=15 Score=21.86 Aligned_cols=33 Identities=9% Similarity=-0.150 Sum_probs=23.0
Q ss_pred cCCcccCCCCcccchhhHhh-hhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFLP-FCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~-~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+. +++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emh_A 10 ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred CCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 57899999999998765543 4431 245577875
No 216
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.69 E-value=17 Score=21.53 Aligned_cols=33 Identities=9% Similarity=-0.103 Sum_probs=22.9
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytj_A 10 EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred CcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999876544 44442 235567876
No 217
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=44.56 E-value=6.8 Score=21.76 Aligned_cols=18 Identities=11% Similarity=-0.107 Sum_probs=13.8
Q ss_pred CCcccCCCCcccchhhHh
Q 025405 172 EPVRRYQILQIYPRFSFL 189 (253)
Q Consensus 172 ~Pv~s~~CgHvYek~aI~ 189 (253)
.|+.|..||..|...+-+
T Consensus 1 kp~~C~~C~k~f~~~~~L 18 (32)
T 2kfq_A 1 YAFACPACPKRFMRSDAL 18 (32)
T ss_dssp CCSSSSSSCTTHHHHHTT
T ss_pred CCCCCCCCCcccCCHHHH
Confidence 378899999999876543
No 218
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.43 E-value=22 Score=20.99 Aligned_cols=33 Identities=6% Similarity=-0.157 Sum_probs=22.2
Q ss_pred cCCcccCCCCcccchhhH-hhhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+- ..+++. ..+...|++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eov_A 10 EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS 45 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred CCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 568999999999987554 344442 234567775
No 219
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.04 E-value=18 Score=21.52 Aligned_cols=33 Identities=9% Similarity=0.086 Sum_probs=22.2
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|++|..||..|...+-+ .+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ene_A 10 EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45 (46)
T ss_dssp SSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred CCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence 5689999999999876544 445422 24466765
No 220
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=43.94 E-value=8.4 Score=20.16 Aligned_cols=17 Identities=12% Similarity=0.002 Sum_probs=13.0
Q ss_pred CcccCCCCcccchhhHh
Q 025405 173 PVRRYQILQIYPRFSFL 189 (253)
Q Consensus 173 Pv~s~~CgHvYek~aI~ 189 (253)
|+.|..||..|....-+
T Consensus 2 ~~~C~~C~k~f~~~~~l 18 (29)
T 1rik_A 2 KFACPECPKRFMRSDHL 18 (29)
T ss_dssp CEECSSSSCEESCSHHH
T ss_pred CccCCCCCchhCCHHHH
Confidence 78889999998765443
No 221
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=43.79 E-value=32 Score=25.81 Aligned_cols=12 Identities=25% Similarity=0.589 Sum_probs=6.9
Q ss_pred CCCCcccccccc
Q 025405 197 YFPRCNHFGCQL 208 (253)
Q Consensus 197 ~~~~CPv~GC~~ 208 (253)
+...||+.+|+.
T Consensus 66 ~~~~C~~~~C~~ 77 (155)
T 2gli_A 66 KPHKCTFEGCRK 77 (155)
T ss_dssp CCCCCCSTTCCC
T ss_pred CCccCCCCCCCC
Confidence 445666666665
No 222
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=43.67 E-value=6 Score=30.21 Aligned_cols=12 Identities=17% Similarity=0.492 Sum_probs=8.6
Q ss_pred ccCCCCcccccc
Q 025405 158 ISCPLSGKPITE 169 (253)
Q Consensus 158 ~~CPlT~~~i~~ 169 (253)
+.||.++.|+..
T Consensus 9 LaCP~cK~pL~l 20 (97)
T 2k5r_A 9 LCSPDTRQPLSL 20 (97)
T ss_dssp CCCCTTSSCCEE
T ss_pred eECCCCCCcccc
Confidence 468998877644
No 223
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=43.59 E-value=6.3 Score=31.50 Aligned_cols=14 Identities=0% Similarity=-0.254 Sum_probs=11.6
Q ss_pred cccCCCCcccchhh
Q 025405 174 VRRYQILQIYPRFS 187 (253)
Q Consensus 174 v~s~~CgHvYek~a 187 (253)
.+|..|||+|+-..
T Consensus 71 ~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 71 FKCRNCNYEWKLKE 84 (139)
T ss_dssp EEETTTCCEEEGGG
T ss_pred EECCCCCCEEeccc
Confidence 56899999998765
No 224
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.53 E-value=20 Score=21.20 Aligned_cols=33 Identities=6% Similarity=-0.108 Sum_probs=22.6
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eml_A 10 EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred CCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence 5789999999999876654 345422 34567775
No 225
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=43.31 E-value=32 Score=29.25 Aligned_cols=71 Identities=11% Similarity=0.130 Sum_probs=35.6
Q ss_pred CCCCchh-hhHHHHhhhccCCCCCCCCCCcceeeeccc-Cc-cccccCCCCccccccccCCcccCCCCcccchh
Q 025405 116 PPNDPLH-KFREAVWNVHHAGELMPGEEQEDIVMTSTQ-SN-ILNISCPLSGKPITELAEPVRRYQILQIYPRF 186 (253)
Q Consensus 116 ~~~~~~~-~Fke~I~~v~~~g~p~p~deddDi~v~~~q-~~-~~n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~ 186 (253)
+.+++.+ .|.+.-..+...|...|.-++.|..+++.. -. +..-.|+...++|..+..-.-|..||++|...
T Consensus 120 f~~~~~l~~i~~~Y~~Lk~~G~~FP~~~~~damf~~~~~p~W~~~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~ 193 (226)
T 3zyq_A 120 FRNEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKHHCRACGQIFCGK 193 (226)
T ss_dssp TTTCGGGHHHHHHHHHHHHHTCCCCCCCGGGGCCCCCCCCCCCCCSBCTTTCCBCBTTBCCEECTTTCCEECTT
T ss_pred hCCCcchHHHHHHHHHHHhcCCCcccchhHHHhhhcccccccccCCCCcCcCCCCCccccccccCCCcCEeChh
Confidence 3445655 555554555567777775333343332211 00 11234666666665555555566666666544
No 226
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.31 E-value=10 Score=21.25 Aligned_cols=19 Identities=5% Similarity=-0.139 Sum_probs=14.8
Q ss_pred cCCcccCCCCcccchhhHh
Q 025405 171 AEPVRRYQILQIYPRFSFL 189 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~ 189 (253)
+.|+.|..||..|....-+
T Consensus 7 ~k~~~C~~C~k~f~~~~~l 25 (36)
T 2els_A 7 GKIFTCEYCNKVFKFKHSL 25 (36)
T ss_dssp CCCEECTTTCCEESSHHHH
T ss_pred CCCEECCCCCceeCCHHHH
Confidence 5689999999999765543
No 227
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.14 E-value=19 Score=21.34 Aligned_cols=33 Identities=9% Similarity=0.083 Sum_probs=22.6
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++. ..+..+||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytd_A 10 EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred CcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999876544 34432 235567875
No 228
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=42.78 E-value=25 Score=20.88 Aligned_cols=33 Identities=6% Similarity=-0.042 Sum_probs=22.6
Q ss_pred cCCcccCCCCcccchhhHhh-hhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFLP-FCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~-~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+. +++. ..+...||+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emk_A 10 EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45 (46)
T ss_dssp SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred CCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 56899999999998766543 4432 235567775
No 229
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.63 E-value=20 Score=21.22 Aligned_cols=33 Identities=6% Similarity=-0.045 Sum_probs=22.7
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emm_A 10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred CCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5689999999999876544 44432 235567875
No 230
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=42.38 E-value=37 Score=21.05 Aligned_cols=28 Identities=29% Similarity=0.248 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHHHH
Q 025405 57 VKELEDATIQLMEAFGDCTHHSAAIQSV 84 (253)
Q Consensus 57 vkeLe~~v~eL~~~~~e~~~~~~Alq~l 84 (253)
+++|++.+.+|+....++..-..-|+++
T Consensus 3 MnQLEdkVEeLl~~~~~Le~eV~RL~~l 30 (34)
T 2hy6_A 3 VKQLADAVEELASANYHLANAVARLAKA 30 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 5789999999998777766665555544
No 231
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.35 E-value=19 Score=21.37 Aligned_cols=33 Identities=9% Similarity=-0.033 Sum_probs=22.4
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...|++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytg_A 10 EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999875544 44442 234567775
No 232
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=42.31 E-value=9.8 Score=19.72 Aligned_cols=15 Identities=7% Similarity=0.146 Sum_probs=11.7
Q ss_pred CcccCCCCcccchhh
Q 025405 173 PVRRYQILQIYPRFS 187 (253)
Q Consensus 173 Pv~s~~CgHvYek~a 187 (253)
|++|..||..|....
T Consensus 2 ~~~C~~C~k~f~~~~ 16 (29)
T 2m0f_A 2 PLKCRECGKQFTTSG 16 (29)
T ss_dssp CEECTTTSCEESCHH
T ss_pred CccCCCCCCccCChh
Confidence 778888999887544
No 233
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=42.30 E-value=22 Score=21.01 Aligned_cols=33 Identities=9% Similarity=-0.075 Sum_probs=22.3
Q ss_pred cCCcccCCCCcccchhhH-hhhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+- ..+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em9_A 10 EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred CcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence 578999999999986544 4455422 34567775
No 234
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.21 E-value=14 Score=21.41 Aligned_cols=23 Identities=9% Similarity=0.059 Sum_probs=17.1
Q ss_pred cCCcccCCCCcccchhhHh-hhhh
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~ 193 (253)
+.|+.|..||..|...+-+ .+++
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~~ 31 (42)
T 2yte_A 8 EKPYSCAECKETFSDNNRLVQHQK 31 (42)
T ss_dssp CCSCBCTTTCCBCSSHHHHHHHHH
T ss_pred CCCeECCCCCCccCCHHHHHHHHH
Confidence 5689999999999876544 3443
No 235
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.20 E-value=20 Score=21.29 Aligned_cols=33 Identities=9% Similarity=-0.118 Sum_probs=22.6
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|++|..|+..|....-+ .+++.. .+...|++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ep0_A 10 EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred CCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence 5789999999999876544 445422 34567775
No 236
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=42.16 E-value=11 Score=27.00 Aligned_cols=13 Identities=0% Similarity=-0.404 Sum_probs=7.2
Q ss_pred cccCCCCcccchh
Q 025405 174 VRRYQILQIYPRF 186 (253)
Q Consensus 174 v~s~~CgHvYek~ 186 (253)
++|..||+.||..
T Consensus 29 Y~C~~CG~~~e~~ 41 (70)
T 1twf_L 29 YICAECSSKLSLS 41 (70)
T ss_dssp EECSSSCCEECCC
T ss_pred EECCCCCCcceeC
Confidence 4555666666543
No 237
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=48.22 E-value=5.3 Score=20.71 Aligned_cols=15 Identities=13% Similarity=-0.022 Sum_probs=11.6
Q ss_pred CcccCCCCcccchhh
Q 025405 173 PVRRYQILQIYPRFS 187 (253)
Q Consensus 173 Pv~s~~CgHvYek~a 187 (253)
|+.|..||..|...+
T Consensus 2 p~~C~~C~k~f~~~~ 16 (26)
T 2lvu_A 2 PYVCERCGKRFVQSS 16 (26)
Confidence 778888988887643
No 238
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=42.07 E-value=11 Score=21.74 Aligned_cols=23 Identities=0% Similarity=-0.255 Sum_probs=17.0
Q ss_pred cCCcccCCCCcccchhhH-hhhhh
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~ 193 (253)
+.|++|..||..|...+- ..+++
T Consensus 4 ~k~~~C~~C~k~f~~~~~L~~H~~ 27 (39)
T 1njq_A 4 PRSYTCSFCKREFRSAQALGGHMN 27 (39)
T ss_dssp SSSEECTTTCCEESSHHHHHHHHH
T ss_pred CCceECCCCCcccCCHHHHHHHHH
Confidence 568999999999976554 44554
No 239
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=41.98 E-value=23 Score=25.42 Aligned_cols=65 Identities=22% Similarity=0.278 Sum_probs=38.9
Q ss_pred ccccCCCCcccccc------------ccCCcccCCCCcccch-hhHhhhhhc-----CCCCCCccccccccccccCcccc
Q 025405 156 LNISCPLSGKPITE------------LAEPVRRYQILQIYPR-FSFLPFCSL-----DCYFPRCNHFGCQLYFNWKKCVF 217 (253)
Q Consensus 156 ~n~~CPlT~~~i~~------------l~~Pv~s~~CgHvYek-~aI~~~i~~-----~~~~~~CPv~GC~~~l~~~dL~~ 217 (253)
..+.||+-.+.+.. -..|+.|..|+..|.. ..+..++.. ......||+ |+..+. .
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~-----~ 78 (124)
T 2dlq_A 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFR-----R 78 (124)
T ss_dssp SSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCEES-----S
T ss_pred CCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCccC-----C
Confidence 35778777654321 1368889999988854 445555542 234567887 876543 2
Q ss_pred cHhHhhHhHH
Q 025405 218 KYHLKGHMLF 227 (253)
Q Consensus 218 D~~l~~~~~~ 227 (253)
-..|+++++.
T Consensus 79 ~~~l~~H~~~ 88 (124)
T 2dlq_A 79 RMELRLHMVS 88 (124)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3446666653
No 240
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.94 E-value=18 Score=21.46 Aligned_cols=33 Identities=9% Similarity=-0.008 Sum_probs=22.7
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+..+|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emp_A 10 VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred CcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999876544 34432 245567875
No 241
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.64 E-value=24 Score=20.96 Aligned_cols=33 Identities=6% Similarity=-0.149 Sum_probs=22.6
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++. ..+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytt_A 10 EKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS 45 (46)
T ss_dssp CCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999876544 34431 245577875
No 242
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.31 E-value=21 Score=21.12 Aligned_cols=33 Identities=9% Similarity=-0.081 Sum_probs=22.5
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++.. .+...||+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ep2_A 10 EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred CcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5789999999999875544 445422 34567875
No 243
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.21 E-value=23 Score=20.92 Aligned_cols=33 Identities=3% Similarity=-0.205 Sum_probs=22.1
Q ss_pred cCCcccCCCCcccchhhH-hhhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+- ..+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eme_A 10 EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred CCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 568999999999977544 4445422 34567775
No 244
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.21 E-value=19 Score=21.39 Aligned_cols=33 Identities=12% Similarity=-0.059 Sum_probs=22.6
Q ss_pred cCCcccCCCCcccchhhHhh-hhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFLP-FCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~-~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+. +++. ..+...|++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoo_A 10 ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS 45 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred CCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence 57899999999998766543 3331 245567775
No 245
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=41.10 E-value=22 Score=21.09 Aligned_cols=33 Identities=9% Similarity=-0.085 Sum_probs=22.3
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2el6_A 10 VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS 45 (46)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5789999999999876544 444422 34567765
No 246
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=40.82 E-value=21 Score=24.60 Aligned_cols=49 Identities=12% Similarity=0.044 Sum_probs=31.4
Q ss_pred cCCcccCCCCcccchh-hHhhhhhcC--CCCCCccccccccccccCcccccHhHhhHhH
Q 025405 171 AEPVRRYQILQIYPRF-SFLPFCSLD--CYFPRCNHFGCQLYFNWKKCVFKYHLKGHML 226 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~-aI~~~i~~~--~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~ 226 (253)
+.|+.|..|+..|... .+..+++.. .+..+||+ |+..+. .-..|+++++
T Consensus 34 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~-----~~~~l~~H~~ 85 (96)
T 2dmd_A 34 VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI--CPYASR-----NSSQLTVHLR 85 (96)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSS--SSCEES-----SHHHHHHHHT
T ss_pred CCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCCccC-----CHHHHHHHHH
Confidence 4688999999999654 455566532 34578988 886443 2334556654
No 247
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.50 E-value=19 Score=21.25 Aligned_cols=33 Identities=9% Similarity=-0.092 Sum_probs=22.4
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2epw_A 10 EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred CCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5689999999999876544 444422 34567775
No 248
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.24 E-value=15 Score=21.35 Aligned_cols=23 Identities=9% Similarity=-0.005 Sum_probs=17.3
Q ss_pred cCCcccCCCCcccchhhHh-hhhh
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~ 193 (253)
+.|+.|..||..|...+-+ .+++
T Consensus 9 ~k~~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2eos_A 9 EKPYPCEICGTRFRHLQTLKSHLR 32 (42)
T ss_dssp SCCBCCSSSCCCBSSHHHHHHHTT
T ss_pred CCCEECCCCCCccCCHHHHHHHHH
Confidence 5789999999999876544 4444
No 249
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=46.39 E-value=6 Score=20.93 Aligned_cols=16 Identities=6% Similarity=0.056 Sum_probs=12.1
Q ss_pred CCcccCCCCcccchhh
Q 025405 172 EPVRRYQILQIYPRFS 187 (253)
Q Consensus 172 ~Pv~s~~CgHvYek~a 187 (253)
.|+.|..||..|....
T Consensus 2 k~~~C~~C~k~f~~~~ 17 (30)
T 2lvr_A 2 KPYVCIHCQRQFADPG 17 (30)
Confidence 4788888988887543
No 250
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.79 E-value=19 Score=21.32 Aligned_cols=33 Identities=9% Similarity=0.052 Sum_probs=22.5
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2yu8_A 10 EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45 (46)
T ss_dssp CSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred CCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 5789999999999876544 34431 245567775
No 251
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=39.76 E-value=22 Score=26.93 Aligned_cols=51 Identities=20% Similarity=0.161 Sum_probs=32.9
Q ss_pred cCCcccCC--CCcccch-hhHhhhhhcC--CCCCCccccccccccccCcccccHhHhhHhH
Q 025405 171 AEPVRRYQ--ILQIYPR-FSFLPFCSLD--CYFPRCNHFGCQLYFNWKKCVFKYHLKGHML 226 (253)
Q Consensus 171 ~~Pv~s~~--CgHvYek-~aI~~~i~~~--~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~ 226 (253)
+.|+.|.. |+..|.. ..+..+++.. .+...|++.+|+..+. .-..|+++++
T Consensus 88 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~-----~~~~L~~H~~ 143 (155)
T 2rpc_A 88 EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFA-----NSSDRKKHMH 143 (155)
T ss_dssp CCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBS-----SHHHHHHSST
T ss_pred CCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccC-----CHHHHHHHHH
Confidence 46888887 9999865 4455566522 3457899988987543 3334555554
No 252
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=39.66 E-value=14 Score=20.58 Aligned_cols=20 Identities=5% Similarity=-0.094 Sum_probs=14.1
Q ss_pred CcccCCCCcccchhh-Hhhhh
Q 025405 173 PVRRYQILQIYPRFS-FLPFC 192 (253)
Q Consensus 173 Pv~s~~CgHvYek~a-I~~~i 192 (253)
|+.|..||..|.... +..++
T Consensus 2 p~~C~~C~k~F~~~~~L~~H~ 22 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLSKHI 22 (33)
T ss_dssp CCCCSSSCCCCSSHHHHHHHH
T ss_pred cccCCCCCchhCCHHHHHHHH
Confidence 788999999997654 33344
No 253
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=39.59 E-value=18 Score=24.49 Aligned_cols=37 Identities=11% Similarity=0.029 Sum_probs=16.4
Q ss_pred CcccCC--CCcccch-hhHhhhhhcC--CCCCCccccccccc
Q 025405 173 PVRRYQ--ILQIYPR-FSFLPFCSLD--CYFPRCNHFGCQLY 209 (253)
Q Consensus 173 Pv~s~~--CgHvYek-~aI~~~i~~~--~~~~~CPv~GC~~~ 209 (253)
|+.|.. ||..|.. ..+..+++.. .+...||..+|+..
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~ 46 (89)
T 2wbs_A 5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWK 46 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCE
T ss_pred CeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCc
Confidence 444544 5655533 2333334311 13345655556543
No 254
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=39.44 E-value=8.3 Score=30.89 Aligned_cols=42 Identities=12% Similarity=0.139 Sum_probs=30.1
Q ss_pred CcccCCCCcccchhhHhhhhhcC--CCCCCccccccccccccCccc
Q 025405 173 PVRRYQILQIYPRFSFLPFCSLD--CYFPRCNHFGCQLYFNWKKCV 216 (253)
Q Consensus 173 Pv~s~~CgHvYek~aI~~~i~~~--~~~~~CPv~GC~~~l~~~dL~ 216 (253)
||.+..|+..+.+..+..+++.. .....|| .|...+.+.++.
T Consensus 110 ~v~C~~C~~~~~r~~l~~H~~~~C~~r~~~C~--~C~~~~~~~~l~ 153 (170)
T 3hcs_A 110 LMDCPQCQRPFQKFHINIHILKDCPRRQVSCD--NCAASMAFEDKE 153 (170)
T ss_dssp EEECTTTCCEEEGGGHHHHHHHTCTTCEEECT--TTCCEEEGGGHH
T ss_pred eeECCCCChHHHHHHHHHHhhhhCCCCCeECC--CCCCccCHHHHH
Confidence 67777888888888888888522 3446687 588877776663
No 255
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.39 E-value=19 Score=21.33 Aligned_cols=33 Identities=6% Similarity=-0.221 Sum_probs=22.5
Q ss_pred cCCcccCCCCcccchhhH-hhhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~~~--~~~~~CPv 203 (253)
+.|++|..||..|...+- ..+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ysp_A 10 EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS 45 (46)
T ss_dssp CCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred CCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence 578999999999987554 4455422 34567775
No 256
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=39.28 E-value=17 Score=24.14 Aligned_cols=38 Identities=11% Similarity=0.110 Sum_probs=22.8
Q ss_pred cCCcccCCCCcccch-hhHhhhhhc--CCCCCCcccccccccc
Q 025405 171 AEPVRRYQILQIYPR-FSFLPFCSL--DCYFPRCNHFGCQLYF 210 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek-~aI~~~i~~--~~~~~~CPv~GC~~~l 210 (253)
..|+.|..|+..|.. ..+..+++. ..+...||+ |+..+
T Consensus 27 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f 67 (82)
T 2kmk_A 27 TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAF 67 (82)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTT--TSCEE
T ss_pred CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCC--cchhh
Confidence 357778888888854 344445542 234567877 77643
No 257
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.25 E-value=23 Score=21.00 Aligned_cols=33 Identities=3% Similarity=-0.222 Sum_probs=22.2
Q ss_pred cCCcccCCCCcccchhhH-hhhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+- ..+++.. .+...|++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em5_A 10 TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp SCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred CCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 568999999999976554 4455422 34467775
No 258
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=38.91 E-value=19 Score=24.06 Aligned_cols=51 Identities=16% Similarity=0.150 Sum_probs=32.9
Q ss_pred cCCcccCCCCcccchh-hHhhhhhc-CC---CCCCccccccccccccCcccccHhHhhHhHHH
Q 025405 171 AEPVRRYQILQIYPRF-SFLPFCSL-DC---YFPRCNHFGCQLYFNWKKCVFKYHLKGHMLFM 228 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~-aI~~~i~~-~~---~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~~ 228 (253)
+.|+.|..|+..|... .+..+++. .. +..+||+ |...+. .-..|+++|+..
T Consensus 13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~-----~~~~L~~H~~~~ 68 (77)
T 2ct1_A 13 EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIA-----RKSDLGVHLRKQ 68 (77)
T ss_dssp CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEES-----SHHHHHHHHHHT
T ss_pred CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccC-----CHHHHHHHHHHh
Confidence 5689999999999764 44455531 21 4578998 887443 334566666543
No 259
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.79 E-value=22 Score=21.08 Aligned_cols=33 Identities=9% Similarity=-0.056 Sum_probs=22.5
Q ss_pred cCCcccCCCCcccchhh-Hhhhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~~--~~~~~~CPv 203 (253)
+.|++|..||..|.... +..+++. ..+..+|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em8_A 10 EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred CCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence 56899999999998754 4444442 235577875
No 260
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=38.45 E-value=4.4 Score=30.39 Aligned_cols=35 Identities=17% Similarity=0.399 Sum_probs=27.0
Q ss_pred CCCCccccccccccccCcccc--------cHhHhhHhHHHHhhcc
Q 025405 197 YFPRCNHFGCQLYFNWKKCVF--------KYHLKGHMLFMQVLEY 233 (253)
Q Consensus 197 ~~~~CPv~GC~~~l~~~dL~~--------D~~l~~~~~~~~~~~~ 233 (253)
...+||+ |...|.+.+|+. ..+++.|=+||..+|-
T Consensus 7 ~~~~~Pl--CG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~ 49 (95)
T 2k5c_A 7 HMAKCPI--CGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEE 49 (95)
T ss_dssp -CEECSS--SCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHH
T ss_pred ccccCCc--CCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHH
Confidence 4578999 888888888763 4568888899988873
No 261
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.19 E-value=23 Score=20.93 Aligned_cols=33 Identities=9% Similarity=-0.029 Sum_probs=22.4
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...|++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2en1_A 10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999876544 44442 234567775
No 262
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=38.18 E-value=9.5 Score=33.66 Aligned_cols=68 Identities=21% Similarity=0.174 Sum_probs=35.5
Q ss_pred cccCCCCcccchhh--Hhhhhhc--------------CCCCCCccccccccccccC-----cccccHhHhhHhHHHHhhc
Q 025405 174 VRRYQILQIYPRFS--FLPFCSL--------------DCYFPRCNHFGCQLYFNWK-----KCVFKYHLKGHMLFMQVLE 232 (253)
Q Consensus 174 v~s~~CgHvYek~a--I~~~i~~--------------~~~~~~CPv~GC~~~l~~~-----dL~~D~~l~~~~~~~~~~~ 232 (253)
++|..|++.|+... +..++.. .....+|+...|...|+.+ +-.|+..+.+....++
T Consensus 135 ~~C~~C~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~C~~~~Cgg~lrP~VV~FGE~lp~~~~~~a~~~~~--- 211 (273)
T 3riy_A 135 TRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELA--- 211 (273)
T ss_dssp EEETTTCCEEECCCSSSSGGGTTCCCCSTTCCCCCCCGGGSCBCCGGGCCCBEEEEECCTTSBCCHHHHHHHHHHHH---
T ss_pred eEcCCCCCcccccccchhhhhhcccCCcccccccccccCCCCCCCCCCCCCeeCCcEEEeCCcCCHHHHHHHHHHHh---
Confidence 56778888886431 2222210 1123578544588755543 3335555555554443
Q ss_pred cCCCeEEEecccCCcc
Q 025405 233 YDGDIYLLGLASGTSL 248 (253)
Q Consensus 233 ~~~~~~~~~~~~~~~~ 248 (253)
.-|++|. .||||
T Consensus 212 -~aDl~lv---iGTSl 223 (273)
T 3riy_A 212 -HCDLCLV---VGTSS 223 (273)
T ss_dssp -HCSEEEE---ESCCS
T ss_pred -cCCEEEE---EeeCC
Confidence 3566553 46665
No 263
>1pxe_A Neural zinc finger transcription factor 1; CCHHC zinc binding domain, neural zinc finger factor-1, DNA binding domain, metal binding protein; NMR {Rattus norvegicus} SCOP: g.73.1.1
Probab=37.93 E-value=11 Score=26.73 Aligned_cols=20 Identities=15% Similarity=0.179 Sum_probs=10.7
Q ss_pred hhhhcCCCCCCccccccccc
Q 025405 190 PFCSLDCYFPRCNHFGCQLY 209 (253)
Q Consensus 190 ~~i~~~~~~~~CPv~GC~~~ 209 (253)
++-+..+...+||..||...
T Consensus 9 ~~~~~~~~~~~CPtpGC~G~ 28 (63)
T 1pxe_A 9 DPSRTEKRESKCPTPGCDGT 28 (63)
T ss_dssp -------CCCCSCCSSCCCC
T ss_pred CccccccccccCCCCCcCcc
Confidence 33332345578999999974
No 264
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.84 E-value=13 Score=20.87 Aligned_cols=23 Identities=0% Similarity=-0.172 Sum_probs=16.8
Q ss_pred cCCcccCCCCcccchh--hHhhhhh
Q 025405 171 AEPVRRYQILQIYPRF--SFLPFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~--aI~~~i~ 193 (253)
+.|+.|..|+..|... .+..+++
T Consensus 7 ~k~~~C~~C~k~f~~~~~~L~~H~~ 31 (37)
T 2elp_A 7 GRAMKCPYCDFYFMKNGSDLQRHIW 31 (37)
T ss_dssp CCCEECSSSSCEECSSCHHHHHHHH
T ss_pred CCCeECCCCChhhccCHHHHHHHHH
Confidence 5689999999999875 4444443
No 265
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.58 E-value=23 Score=21.00 Aligned_cols=33 Identities=9% Similarity=-0.042 Sum_probs=22.7
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|....-+ .+++. ..+..+|++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en6_A 10 EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS 45 (46)
T ss_dssp SCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred CcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence 5789999999999876544 44432 235567775
No 266
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.37 E-value=6.2 Score=25.75 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=15.5
Q ss_pred CCcccCCCCcccchhhHhhhhhcCCCCCCcccccccc
Q 025405 172 EPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQL 208 (253)
Q Consensus 172 ~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~ 208 (253)
.|+.|..||..|...+-+.. .+...|++ |+.
T Consensus 17 ~~~~C~~C~k~f~~~~~l~~----~~~~~C~~--C~~ 47 (73)
T 2ctu_A 17 RSQKCSKCGIIFIRRSTLSR----RKTPMCEK--CRK 47 (73)
T ss_dssp SEEECSSSCCEEECCCCCCC----SSSCCCHH--HHH
T ss_pred CCeeCCcccchhCCHHHhCc----CCCCCCCC--CCh
Confidence 45566666666654433222 23455655 554
No 267
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=37.34 E-value=8.7 Score=26.21 Aligned_cols=13 Identities=15% Similarity=-0.197 Sum_probs=11.1
Q ss_pred cccCCCCcccchh
Q 025405 174 VRRYQILQIYPRF 186 (253)
Q Consensus 174 v~s~~CgHvYek~ 186 (253)
++|..||++|+-+
T Consensus 4 y~C~vCGyvYd~~ 16 (54)
T 4rxn_A 4 YTCTVCGYIYDPE 16 (54)
T ss_dssp EEETTTCCEECTT
T ss_pred eECCCCCeEECCC
Confidence 6799999999864
No 268
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.29 E-value=18 Score=20.91 Aligned_cols=23 Identities=17% Similarity=0.109 Sum_probs=16.7
Q ss_pred cCCcccCCCCcccchhhHh-hhhh
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~ 193 (253)
+.|+.|..||..|....-+ .+++
T Consensus 9 ~k~~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2ytb_A 9 EKPYRCDQCGKAFSQKGSLIVHIR 32 (42)
T ss_dssp CCSBCCTTTTCCBSSHHHHHTTGG
T ss_pred CCCeeCCCccchhCCHHHHHHHHH
Confidence 5689999999999875543 3443
No 269
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=36.90 E-value=22 Score=25.33 Aligned_cols=36 Identities=14% Similarity=0.151 Sum_probs=17.8
Q ss_pred CCcccC--CCCcccchhh-Hhhhhhc--CCCCCCccccccccc
Q 025405 172 EPVRRY--QILQIYPRFS-FLPFCSL--DCYFPRCNHFGCQLY 209 (253)
Q Consensus 172 ~Pv~s~--~CgHvYek~a-I~~~i~~--~~~~~~CPv~GC~~~ 209 (253)
.|+.|. .||..|.... +..+++. ..+...||+ |+..
T Consensus 35 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~ 75 (119)
T 2jp9_A 35 KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRK 75 (119)
T ss_dssp CCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCE
T ss_pred CCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCc--cCch
Confidence 466666 5666665332 3333331 123455665 6553
No 270
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.69 E-value=25 Score=20.78 Aligned_cols=33 Identities=6% Similarity=0.005 Sum_probs=22.1
Q ss_pred cCCcccCCCCcccchhh-Hhhhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+ +..+++. ..+..+|++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yso_A 10 EKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS 45 (46)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred CCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 56899999999998654 4444432 234567775
No 271
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=36.13 E-value=18 Score=19.45 Aligned_cols=16 Identities=13% Similarity=0.023 Sum_probs=10.3
Q ss_pred CCcccC--CCCcccchhh
Q 025405 172 EPVRRY--QILQIYPRFS 187 (253)
Q Consensus 172 ~Pv~s~--~CgHvYek~a 187 (253)
.|+.|. .||..|...+
T Consensus 2 k~~~C~~~~C~k~f~~~~ 19 (32)
T 1zfd_A 2 RPYSCDHPGCDKAFVRNH 19 (32)
T ss_dssp CSBCCCCTTCCCCBSSSH
T ss_pred CCCcCcCCCCCCccCCHH
Confidence 466676 6777776543
No 272
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.75 E-value=29 Score=20.43 Aligned_cols=33 Identities=6% Similarity=-0.175 Sum_probs=21.8
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++.. .+...|+.
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en8_A 10 EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS 45 (46)
T ss_dssp CSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred CCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5689999999999876544 444422 24466764
No 273
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.63 E-value=17 Score=20.96 Aligned_cols=23 Identities=4% Similarity=-0.169 Sum_probs=17.2
Q ss_pred cCCcccCCCCcccchhhHh-hhhh
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~ 193 (253)
+.|+.|..||..|....-+ .+++
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~~ 31 (41)
T 2ept_A 8 QRVYECQECGKSFRQKGSLTLHER 31 (41)
T ss_dssp CCCEECSSSCCEESSHHHHHHHGG
T ss_pred CCCeECCCCCCCcCCHHHHHHHHH
Confidence 5689999999999876544 4554
No 274
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=34.14 E-value=17 Score=22.76 Aligned_cols=19 Identities=11% Similarity=0.030 Sum_probs=15.2
Q ss_pred cCCcccCCCCcccchhhHh
Q 025405 171 AEPVRRYQILQIYPRFSFL 189 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~ 189 (253)
+.|+.|..||..|...+-+
T Consensus 22 ~k~~~C~~C~k~f~~~~~L 40 (54)
T 1yui_A 22 EQPATCPICYAVIRQSRNL 40 (54)
T ss_dssp SCCEECTTTCCEESSHHHH
T ss_pred CCCccCCCCCcccCCHHHH
Confidence 5689999999999876544
No 275
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.96 E-value=21 Score=21.04 Aligned_cols=32 Identities=13% Similarity=0.063 Sum_probs=20.6
Q ss_pred cCCcccCCCCcccchhhH-hhhhhc--CCCCCCcc
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCSL--DCYFPRCN 202 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~~--~~~~~~CP 202 (253)
+.|+.|..||..|....- ..+++. ..+..+|+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (44)
T 2eou_A 10 KTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG 44 (44)
T ss_dssp SCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred CcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence 578999999999987553 344432 13445564
No 276
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.93 E-value=18 Score=21.38 Aligned_cols=23 Identities=9% Similarity=0.016 Sum_probs=16.9
Q ss_pred cCCcccCCCCcccchhh-Hhhhhh
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~ 193 (253)
+.|+.|..||..|...+ +..+++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~ 33 (44)
T 2epv_A 10 EKPYECNECGKAFIWKSLLIVHER 33 (44)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHG
T ss_pred CcCeECCCCCcccCchHHHHHHHh
Confidence 56899999999997654 444554
No 277
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.75 E-value=18 Score=21.56 Aligned_cols=32 Identities=13% Similarity=-0.045 Sum_probs=21.9
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCcc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCN 202 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CP 202 (253)
+.|++|..||..|...+-+ .+++. ..+...||
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yto_A 10 EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred CCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence 5789999999999876544 34442 23456776
No 278
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.57 E-value=94 Score=21.01 Aligned_cols=60 Identities=13% Similarity=0.246 Sum_probs=35.3
Q ss_pred cccCCCCccccccccCCcccCCCCcccchh-hHhhhhhc-CCC--C--------CCccccccccccccCcccccHhHhhH
Q 025405 157 NISCPLSGKPITELAEPVRRYQILQIYPRF-SFLPFCSL-DCY--F--------PRCNHFGCQLYFNWKKCVFKYHLKGH 224 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~CgHvYek~-aI~~~i~~-~~~--~--------~~CPv~GC~~~l~~~dL~~D~~l~~~ 224 (253)
.+.|.|.... .....|..|+..|... .+..+++. ..+ . ..|++ |...+. .-..|+++
T Consensus 13 ~~~c~~~~~~----~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~-----~~~~L~~H 81 (95)
T 2ej4_A 13 ELSCKWIDEA----QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFK-----AKYKLVNH 81 (95)
T ss_dssp CCCCCCCCSS----CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCS-----SHHHHHHH
T ss_pred CceeEeecCC----cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccC-----CHHHHHHH
Confidence 5778887432 1224478999999755 44555553 211 2 57877 776443 34557777
Q ss_pred hHH
Q 025405 225 MLF 227 (253)
Q Consensus 225 ~~~ 227 (253)
|+.
T Consensus 82 ~~~ 84 (95)
T 2ej4_A 82 IRV 84 (95)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 279
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=33.18 E-value=12 Score=26.87 Aligned_cols=30 Identities=13% Similarity=0.033 Sum_probs=21.9
Q ss_pred cchhhHhhhhhcCCCCCCccccccccccccC
Q 025405 183 YPRFSFLPFCSLDCYFPRCNHFGCQLYFNWK 213 (253)
Q Consensus 183 Yek~aI~~~i~~~~~~~~CPv~GC~~~l~~~ 213 (253)
|++-.+.+|+..+ ..+-||..||...+...
T Consensus 11 Y~~~~~e~~v~~~-~~~~CP~p~C~~~v~~~ 40 (80)
T 2jmo_A 11 YQQYGAEECVLQM-GGVLCPRPGCGAGLLPE 40 (80)
T ss_dssp CCCSSSCCSSCCC-SSCCCCSSSCCCCCCCC
T ss_pred HHHHHHHHHhhhC-CcEECCCCCCCcccEEC
Confidence 6666677777634 47789999999976543
No 280
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.12 E-value=18 Score=21.14 Aligned_cols=32 Identities=13% Similarity=0.108 Sum_probs=20.9
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCcc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCN 202 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CP 202 (253)
+.|+.|..||..|....-+ .+++.. .+...||
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eoj_A 10 ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44 (44)
T ss_dssp CCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred CcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence 5689999999999876544 444422 2345564
No 281
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.03 E-value=17 Score=21.65 Aligned_cols=32 Identities=3% Similarity=-0.010 Sum_probs=21.1
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC---CCCCCcc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD---CYFPRCN 202 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~---~~~~~CP 202 (253)
+.|+.|..||..|....-+ .+++.. .+...|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~ 45 (46)
T 2eoy_A 10 EKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS 45 (46)
T ss_dssp SCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred CCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5689999999999875544 444422 2345665
No 282
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=32.96 E-value=19 Score=20.74 Aligned_cols=23 Identities=9% Similarity=-0.138 Sum_probs=16.5
Q ss_pred cCCcccCCCCcccchhhH-hhhhh
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~ 193 (253)
+.|+.|..||..|....- ..+++
T Consensus 9 ~~~~~C~~C~k~f~~~~~l~~H~~ 32 (42)
T 2epc_A 9 ETPYLCGQCGKSFTQRGSLAVHQR 32 (42)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHH
T ss_pred CCCeECCCCCcccCCHHHHHHHhh
Confidence 568999999999976543 34443
No 283
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.87 E-value=18 Score=21.27 Aligned_cols=23 Identities=9% Similarity=0.265 Sum_probs=17.1
Q ss_pred cCCcccCCCCcccchhhHh-hhhh
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~ 193 (253)
+.|+.|..||..|....-+ .+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2yu5_A 10 ENPFKCSKCDRVFTQRNYLVQHER 33 (44)
T ss_dssp CCSEECSSSSCEESSSHHHHHHHH
T ss_pred CCCeECCCCCchhCCHHHHHHHhH
Confidence 5689999999999876544 3443
No 284
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=32.72 E-value=33 Score=24.29 Aligned_cols=50 Identities=12% Similarity=0.127 Sum_probs=29.6
Q ss_pred cCCcccCCCCcccchh-hHhhhhhcC--CCCCCccccccccccccCcccccHhHhhHhHH
Q 025405 171 AEPVRRYQILQIYPRF-SFLPFCSLD--CYFPRCNHFGCQLYFNWKKCVFKYHLKGHMLF 227 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~-aI~~~i~~~--~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~ 227 (253)
..|+.|..|+..|... .+..+++.. .+..+||+ |...+. .-..|+++|+.
T Consensus 35 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~-----~~~~l~~H~~~ 87 (110)
T 2csh_A 35 LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFM-----WRDSFHRHVTS 87 (110)
T ss_dssp CCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSS--SCCEES-----CHHHHHHHHHH
T ss_pred CcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCC--Ccchhc-----CHHHHHHHHHH
Confidence 3678888888888754 444555422 24467887 876443 22345555543
No 285
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.70 E-value=19 Score=20.83 Aligned_cols=19 Identities=11% Similarity=0.130 Sum_probs=15.3
Q ss_pred cCCcccCCCCcccchhhHh
Q 025405 171 AEPVRRYQILQIYPRFSFL 189 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~ 189 (253)
+.|+.|..||..|...+-+
T Consensus 9 ~k~~~C~~C~k~f~~~~~L 27 (42)
T 2en2_A 9 EKPYKCETCGARFVQVAHL 27 (42)
T ss_dssp SCSEECTTTCCEESSHHHH
T ss_pred CCCEeCCCcChhhCCHHHH
Confidence 5689999999999876544
No 286
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=32.51 E-value=20 Score=24.70 Aligned_cols=23 Identities=4% Similarity=-0.109 Sum_probs=18.2
Q ss_pred cCCcccCCCCcccchhh-Hhhhhh
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~ 193 (253)
+.|++|..|+..|...+ +..+++
T Consensus 11 ekpy~C~~CgK~F~~~s~L~~H~r 34 (66)
T 2epp_A 11 AGILPCGLCGKVFTDANRLRQHEA 34 (66)
T ss_dssp CCCCCCTTTCCCCSCHHHHHHHHH
T ss_pred ccCcCCCCCCCccCCHHHHHhhhh
Confidence 78999999999998754 555655
No 287
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.18 E-value=23 Score=20.63 Aligned_cols=23 Identities=13% Similarity=0.102 Sum_probs=17.0
Q ss_pred cCCcccCCCCcccchhhHh-hhhh
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~ 193 (253)
+.|+.|..||..|....-+ .+++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2en7_A 10 MKPYVCNECGKAFRSKSYLIIHTR 33 (44)
T ss_dssp SSSSCCTTTCCCCSSHHHHHHHHT
T ss_pred CcCeECCCCCCccCCHHHHHHHhh
Confidence 5689999999999876544 3443
No 288
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=32.05 E-value=18 Score=22.19 Aligned_cols=23 Identities=9% Similarity=-0.063 Sum_probs=16.8
Q ss_pred cCCcccCCCCcccchhh-Hhhhhh
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCS 193 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~ 193 (253)
+.|++|..||..|.... +..+++
T Consensus 5 ~kp~~C~~C~k~F~~~~~L~~H~~ 28 (48)
T 3iuf_A 5 DKPYACDICGKRYKNRPGLSYHYA 28 (48)
T ss_dssp TSCEECTTTCCEESSHHHHHHHHH
T ss_pred CcCEECCCcCcccCCHHHHHHHhh
Confidence 56899999999997654 444444
No 289
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=38.21 E-value=9.7 Score=20.04 Aligned_cols=15 Identities=13% Similarity=0.149 Sum_probs=11.5
Q ss_pred CcccCCCCcccchhh
Q 025405 173 PVRRYQILQIYPRFS 187 (253)
Q Consensus 173 Pv~s~~CgHvYek~a 187 (253)
|+.|..||..|...+
T Consensus 2 ~~~C~~C~k~f~~~~ 16 (29)
T 2lvt_A 2 PCQCVMCGKAFTQAS 16 (29)
Confidence 778888998886543
No 290
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=31.24 E-value=38 Score=22.56 Aligned_cols=50 Identities=10% Similarity=0.037 Sum_probs=30.6
Q ss_pred cCCcccCCCCcccchhh-HhhhhhcCC------CCCCccccccccccccCcccccHhHhhHhHH
Q 025405 171 AEPVRRYQILQIYPRFS-FLPFCSLDC------YFPRCNHFGCQLYFNWKKCVFKYHLKGHMLF 227 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~a-I~~~i~~~~------~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~~ 227 (253)
+.|+.|..|+..|.... +..+++... +..+|++ |...+. .-..|+++++.
T Consensus 13 ~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~-----~~~~L~~H~~~ 69 (86)
T 1x6h_A 13 EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFT-----RRNTMARHADN 69 (86)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEES-----CHHHHHHHHHH
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhC-----CHHHHHHHHHH
Confidence 56888999999987654 344543221 3467887 876443 33456666554
No 291
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.23 E-value=21 Score=20.90 Aligned_cols=33 Identities=9% Similarity=-0.029 Sum_probs=22.6
Q ss_pred cCCcccCCCCcccchhhHh-hhhhc--CCCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSL--DCYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~--~~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++. ..+...|++
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 43 (44)
T 2emx_A 8 EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS 43 (44)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5689999999999876544 34432 235567775
No 292
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=31.07 E-value=37 Score=26.61 Aligned_cols=51 Identities=16% Similarity=0.109 Sum_probs=31.6
Q ss_pred cCCccc--CCCCcccchhh-HhhhhhcC--CCCCCccccccccccccCcccccHhHhhHhH
Q 025405 171 AEPVRR--YQILQIYPRFS-FLPFCSLD--CYFPRCNHFGCQLYFNWKKCVFKYHLKGHML 226 (253)
Q Consensus 171 ~~Pv~s--~~CgHvYek~a-I~~~i~~~--~~~~~CPv~GC~~~l~~~dL~~D~~l~~~~~ 226 (253)
..|+.| ..||..|.... +..+++.. .+...||+.||+..+. .-..|+++++
T Consensus 102 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~-----~~~~L~~H~~ 157 (190)
T 1tf6_A 102 ICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFS-----LPSRLKRHEK 157 (190)
T ss_dssp TSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCS-----SHHHHHHHHT
T ss_pred cceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhc-----CHHHHHHHHH
Confidence 347788 78888886544 44455422 3457888888887543 3345666654
No 293
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=30.97 E-value=94 Score=19.08 Aligned_cols=29 Identities=14% Similarity=0.132 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 025405 57 VKELEDATIQLMEAFGDCTHHSAAIQSVG 85 (253)
Q Consensus 57 vkeLe~~v~eL~~~~~e~~~~~~Alq~l~ 85 (253)
+++||+-+.+|+.-..++..-..-|+++.
T Consensus 2 MnQLEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 2 MKXIEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57899999999887666666555555543
No 294
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.95 E-value=21 Score=20.83 Aligned_cols=32 Identities=13% Similarity=0.000 Sum_probs=20.9
Q ss_pred cCCcccCCCCcccchhhHhh-hhhcC--CCCCCcc
Q 025405 171 AEPVRRYQILQIYPRFSFLP-FCSLD--CYFPRCN 202 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~-~i~~~--~~~~~CP 202 (253)
+.|+.|..||..|....-+. +++.. .+...||
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eof_A 10 EKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG 44 (44)
T ss_dssp CCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred CCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence 56899999999998765543 44322 2345564
No 295
>2jyd_A F5 domain of myelin transcription factor 1; zinc-finger, MYT1, alternative splicing, developmental protein, differentiation, DNA-binding; NMR {Mus musculus}
Probab=30.87 E-value=15 Score=24.33 Aligned_cols=14 Identities=21% Similarity=0.311 Sum_probs=10.9
Q ss_pred CCCCCccccccccc
Q 025405 196 CYFPRCNHFGCQLY 209 (253)
Q Consensus 196 ~~~~~CPv~GC~~~ 209 (253)
....+||..||...
T Consensus 7 ~~~~~CPtpGC~G~ 20 (46)
T 2jyd_A 7 SADLKCPTPGCDGS 20 (46)
T ss_dssp TBTTSCSCSSCCSB
T ss_pred ccCCcCCCCCcCcc
Confidence 34567999999974
No 296
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.81 E-value=21 Score=21.09 Aligned_cols=33 Identities=12% Similarity=-0.035 Sum_probs=22.5
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|...+-+ .+++.. .+...||.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq3_A 10 EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45 (46)
T ss_dssp CCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred CCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5789999999999876554 445422 34566764
No 297
>2jx1_A Myelin transcription factor 1; protein-DNA complex, transcription/DNA complex; HET: DNA; NMR {Mus musculus}
Probab=30.66 E-value=19 Score=21.94 Aligned_cols=11 Identities=27% Similarity=0.594 Sum_probs=9.3
Q ss_pred CCccccccccc
Q 025405 199 PRCNHFGCQLY 209 (253)
Q Consensus 199 ~~CPv~GC~~~ 209 (253)
.+||..||...
T Consensus 2 ~~CPtpGC~g~ 12 (31)
T 2jx1_A 2 LKCPTPGCDGS 12 (31)
T ss_dssp CSCSCTTCCSS
T ss_pred CcCCCCCcccc
Confidence 47999999974
No 298
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=30.00 E-value=1e+02 Score=19.08 Aligned_cols=29 Identities=10% Similarity=0.156 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 025405 57 VKELEDATIQLMEAFGDCTHHSAAIQSVG 85 (253)
Q Consensus 57 vkeLe~~v~eL~~~~~e~~~~~~Alq~l~ 85 (253)
+++||+-+.+|+.-..++..-..-|+++.
T Consensus 3 MnQLE~kVEeLl~~n~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 3 MXQLEXKVXELLXKNXHLEXEVXRLKXLV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 57899999999987777776666665553
No 299
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=29.90 E-value=1.3e+02 Score=20.85 Aligned_cols=8 Identities=50% Similarity=0.825 Sum_probs=3.1
Q ss_pred HhHHHHhH
Q 025405 13 TGRIRNAA 20 (253)
Q Consensus 13 ~~~~~~a~ 20 (253)
|+++.+++
T Consensus 18 A~~~~~~~ 25 (93)
T 4ioe_A 18 AGNFKNAA 25 (93)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 300
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=29.80 E-value=20 Score=18.49 Aligned_cols=16 Identities=0% Similarity=-0.355 Sum_probs=11.3
Q ss_pred CcccC--CCCcccchhhH
Q 025405 173 PVRRY--QILQIYPRFSF 188 (253)
Q Consensus 173 Pv~s~--~CgHvYek~aI 188 (253)
|+.|. .||..|...+-
T Consensus 2 ~~~C~~~~C~k~f~~~~~ 19 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRK 19 (29)
T ss_dssp CEEECSTTTCEEESSHHH
T ss_pred CCCCcCCcCcCccCCHHH
Confidence 67777 88888865443
No 301
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.59 E-value=22 Score=20.85 Aligned_cols=32 Identities=6% Similarity=-0.099 Sum_probs=20.6
Q ss_pred cCCcccCCCCcccchhhHh-hhhhcC--CCCCCcc
Q 025405 171 AEPVRRYQILQIYPRFSFL-PFCSLD--CYFPRCN 202 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~-~~i~~~--~~~~~CP 202 (253)
+.|+.|..||..|...+-+ .+++.. .+...||
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2emb_A 10 RKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG 44 (44)
T ss_dssp CSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred CCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence 5689999999999875544 444422 2345564
No 302
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.57 E-value=43 Score=23.84 Aligned_cols=12 Identities=0% Similarity=-0.078 Sum_probs=5.3
Q ss_pred CcccCCCCcccc
Q 025405 173 PVRRYQILQIYP 184 (253)
Q Consensus 173 Pv~s~~CgHvYe 184 (253)
|+.|..||..|.
T Consensus 80 ~~~C~~C~k~f~ 91 (115)
T 2dmi_A 80 VLKCMYCGHSFE 91 (115)
T ss_dssp SCBCSSSCCBCS
T ss_pred ceECCCCCCccC
Confidence 444444444443
No 303
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=29.36 E-value=29 Score=18.40 Aligned_cols=15 Identities=13% Similarity=0.033 Sum_probs=10.4
Q ss_pred CcccC--CCCcccchhh
Q 025405 173 PVRRY--QILQIYPRFS 187 (253)
Q Consensus 173 Pv~s~--~CgHvYek~a 187 (253)
|+.|. .||..|...+
T Consensus 2 p~~C~~~~C~k~f~~~~ 18 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSD 18 (31)
T ss_dssp CCBCCSTTCCCBCSSHH
T ss_pred CcCCcCCCCCcccCCHh
Confidence 66776 7888886543
No 304
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=29.32 E-value=31 Score=23.33 Aligned_cols=28 Identities=14% Similarity=0.279 Sum_probs=21.9
Q ss_pred cccchhhHhhhhhcCCCCCCccccccccccc
Q 025405 181 QIYPRFSFLPFCSLDCYFPRCNHFGCQLYFN 211 (253)
Q Consensus 181 HvYek~aI~~~i~~~~~~~~CPv~GC~~~l~ 211 (253)
+.|=++-+..+|. .+++..||+ |...+.
T Consensus 31 ~~~H~~Cl~~W~~-~~~~~~C~~--C~~~~~ 58 (60)
T 1vyx_A 31 ENVHRSCLSTWLT-ISRNTACQI--CGVVYN 58 (60)
T ss_dssp GSCCHHHHHHHHH-HHTCSBCTT--TCCBCC
T ss_pred hhhHHHHHHHHHH-hCCCCccCC--CCCeee
Confidence 3899999999997 334678999 877554
No 305
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=28.56 E-value=3.4e+02 Score=24.68 Aligned_cols=40 Identities=18% Similarity=-0.101 Sum_probs=28.3
Q ss_pred cCCCCccccccccCCcccCCCCcccchhhHhhhhhcCCCCCCccccccc
Q 025405 159 SCPLSGKPITELAEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQ 207 (253)
Q Consensus 159 ~CPlT~~~i~~l~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~ 207 (253)
.|-.|..||-.=+..|+|.-||=.|..+ .++.-|||-|-.
T Consensus 273 iCa~s~tPIY~g~~~v~Cp~cgA~y~~~---------~kG~lC~vC~l~ 312 (325)
T 3mv2_A 273 ICAATYKPIYEDTPSVSDPLTGSKYVIT---------EKDKIDRIAMIS 312 (325)
T ss_dssp ECTTTCCEEESSSCEEECTTTCCEEEGG---------GTTSBCSSSSCB
T ss_pred eecCCcccccCCCCCccCCCCCCeechh---------hCCCCCCCCcCc
Confidence 4888887762226778899999999754 356779985543
No 306
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.67 E-value=24 Score=20.85 Aligned_cols=32 Identities=3% Similarity=-0.162 Sum_probs=21.7
Q ss_pred cCCcccCCCCcccchhhH-hhhhhc--CCCCCCcc
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCSL--DCYFPRCN 202 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~~--~~~~~~CP 202 (253)
+.|+.|..||..|...+- ..+++. ..+..+||
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2en3_A 10 EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44 (46)
T ss_dssp CCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred CCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 578999999999976543 344431 24567776
No 307
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.64 E-value=26 Score=21.27 Aligned_cols=18 Identities=6% Similarity=-0.311 Sum_probs=12.3
Q ss_pred cCCcccCC--CCcccchhhH
Q 025405 171 AEPVRRYQ--ILQIYPRFSF 188 (253)
Q Consensus 171 ~~Pv~s~~--CgHvYek~aI 188 (253)
+.|++|.. |+..|.+.+-
T Consensus 7 ekp~~C~~~~C~k~F~~~~~ 26 (38)
T 2eln_A 7 GILLKCPTDGCDYSTPDKYK 26 (38)
T ss_dssp CCCEECSSSSCCCEESCHHH
T ss_pred CCCCCCCCCCCCCccCCHHH
Confidence 56778865 8888765543
No 308
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.40 E-value=21 Score=20.94 Aligned_cols=19 Identities=11% Similarity=0.128 Sum_probs=15.4
Q ss_pred cCCcccCCCCcccchhhHh
Q 025405 171 AEPVRRYQILQIYPRFSFL 189 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~ 189 (253)
+.|+.|..||-.|...+-+
T Consensus 10 ~~~~~C~~C~k~F~~~~~L 28 (44)
T 2eox_A 10 SKSYNCNECGKAFTRIFHL 28 (44)
T ss_dssp CCCEEETTTTEEESSSHHH
T ss_pred CCCeECcccCcccCCHHHH
Confidence 5789999999999876544
No 309
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=27.22 E-value=1.1e+02 Score=18.74 Aligned_cols=28 Identities=21% Similarity=0.143 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHHHH
Q 025405 57 VKELEDATIQLMEAFGDCTHHSAAIQSV 84 (253)
Q Consensus 57 vkeLe~~v~eL~~~~~e~~~~~~Alq~l 84 (253)
+++||+-+.+|+.-..++..-..-++.+
T Consensus 2 MnQLEdKVEell~~~~~le~EV~Rl~~l 29 (33)
T 2wq1_A 2 MKQLEDKIEENTSKIYHNTNEIARNTKL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 5789999999987666665555555444
No 310
>2k8d_A Peptide methionine sulfoxide reductase MSRB; thermophilic, Zn binding, metal-binding, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=26.58 E-value=20 Score=29.42 Aligned_cols=33 Identities=9% Similarity=-0.027 Sum_probs=24.9
Q ss_pred cCccccccCCCCccccccccCC--------cccCCC----Ccccc
Q 025405 152 QSNILNISCPLSGKPITELAEP--------VRRYQI----LQIYP 184 (253)
Q Consensus 152 q~~~~n~~CPlT~~~i~~l~~P--------v~s~~C----gHvYe 184 (253)
+.++.+|..||....|.+..+- |+|..| ||||+
T Consensus 81 g~GWPSF~~pi~~~~V~~~~D~s~gm~RtEV~C~~Cg~HLGHVF~ 125 (151)
T 2k8d_A 81 GTGWPSFYDVVSEHNIKLREDRSLGMVRCEVLCARCDAHLGHVFD 125 (151)
T ss_dssp TTCCSEESCCSCTTSEECCCCBTTSSCEEEEEETTEEEEEEEEEE
T ss_pred CCCCcccCcccCCCceEEeeCCCCCceEEEEEeCCCCCcCCcccC
Confidence 3578899999976555566664 778888 79996
No 311
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=26.12 E-value=41 Score=23.11 Aligned_cols=10 Identities=30% Similarity=0.840 Sum_probs=4.8
Q ss_pred CCcccccccc
Q 025405 199 PRCNHFGCQL 208 (253)
Q Consensus 199 ~~CPv~GC~~ 208 (253)
..||..+|..
T Consensus 46 ~~C~~~~C~~ 55 (100)
T 2ebt_A 46 YKCTWEGCDW 55 (100)
T ss_dssp EECCSSSCCC
T ss_pred eeCCCCCCCC
Confidence 4455444544
No 312
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=25.79 E-value=1.2e+02 Score=18.68 Aligned_cols=28 Identities=11% Similarity=0.220 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHHHH
Q 025405 57 VKELEDATIQLMEAFGDCTHHSAAIQSV 84 (253)
Q Consensus 57 vkeLe~~v~eL~~~~~e~~~~~~Alq~l 84 (253)
+++||+-+.+|+.-..++..-..-|+++
T Consensus 3 MnQLEdKVEeLl~~~~~Le~EV~RLk~l 30 (34)
T 3c3f_A 3 MXQIEXKLEXILSXLYHXENEXARIXKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 5789999999988666666655555554
No 313
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=25.24 E-value=2.1e+02 Score=21.55 Aligned_cols=33 Identities=6% Similarity=0.120 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHhHhHHHHHHHHHHHhhc
Q 025405 56 MVKELEDATIQLMEAFGDCTHHSAAIQSVGNTY 88 (253)
Q Consensus 56 ~vkeLe~~v~eL~~~~~e~~~~~~Alq~l~~~y 88 (253)
.+..||.+..+.=.+..+...+...|+.+.+.|
T Consensus 62 eI~~LE~iqs~aK~LRnKA~~L~~eLe~F~~~y 94 (96)
T 1t3j_A 62 EIDQLEKMQNNSKLLRNKAVQLESELENFSKQF 94 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 344444444444333333434444444444433
No 314
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.01 E-value=31 Score=23.68 Aligned_cols=35 Identities=6% Similarity=-0.329 Sum_probs=25.3
Q ss_pred cCCcccCCCCcccchhhHhhhhhcCCCCCCccccc
Q 025405 171 AEPVRRYQILQIYPRFSFLPFCSLDCYFPRCNHFG 205 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI~~~i~~~~~~~~CPv~G 205 (253)
+.|+.|..||-.|-+..+..+++.-.+....|-+|
T Consensus 41 ~~~~~C~~C~~~~~~~~l~~H~~~c~~~~~~~~~~ 75 (75)
T 2d9k_A 41 ARTELCGNCGRNVLVKDLKTHPEVCGREGSGPSSG 75 (75)
T ss_dssp HCEEECSSSCCEEETTGGGTHHHHBTTBSSSCCCC
T ss_pred CCceEcccCCCcCcHHHHHHHHHHccCCcCCCCCC
Confidence 47899999999999988888886333444444433
No 315
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.83 E-value=32 Score=20.26 Aligned_cols=33 Identities=6% Similarity=-0.176 Sum_probs=22.3
Q ss_pred cCCcccCCCCcccchhhH-hhhhhcC--CCCCCccc
Q 025405 171 AEPVRRYQILQIYPRFSF-LPFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~~CgHvYek~aI-~~~i~~~--~~~~~CPv 203 (253)
+.|+.|..||..|....- ..+++.. .+...|++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2enc_A 10 EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS 45 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred CCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence 568999999999987554 4455422 34467775
No 316
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=24.71 E-value=28 Score=24.95 Aligned_cols=46 Identities=13% Similarity=0.052 Sum_probs=27.2
Q ss_pred cccCCCCcccchhhHhhhhhcCCCCCCccccccccccccCccc-----ccHh-HhhHhHHHHh
Q 025405 174 VRRYQILQIYPRFSFLPFCSLDCYFPRCNHFGCQLYFNWKKCV-----FKYH-LKGHMLFMQV 230 (253)
Q Consensus 174 v~s~~CgHvYek~aI~~~i~~~~~~~~CPv~GC~~~l~~~dL~-----~D~~-l~~~~~~~~~ 230 (253)
|+|. ||-. .|.....+..+|| |+..++.+.+. .|.. -++.++.||.
T Consensus 5 v~C~-C~~~-------~~~~~~~kT~~C~---CG~~~~~~k~rif~~~~d~~eA~e~~~~lqa 56 (71)
T 1gh9_A 5 FRCD-CGRA-------LYSREGAKTRKCV---CGRTVNVKDRRIFGRADDFEEASELVRKLQE 56 (71)
T ss_dssp EEET-TSCC-------EEEETTCSEEEET---TTEEEECCSSSCBSCCSSHHHHHHHHHHHSS
T ss_pred EECC-CCCE-------EEEcCCCcEEECC---CCCeeeeceEEEEEecCCHHHHHHHHHHHHh
Confidence 5666 7653 2333356778997 88887777664 3433 4444445554
No 317
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.63 E-value=55 Score=19.20 Aligned_cols=33 Identities=6% Similarity=-0.194 Sum_probs=21.5
Q ss_pred cCCcccC--CCCcccchhhH-hhhhhcC--CCCCCccc
Q 025405 171 AEPVRRY--QILQIYPRFSF-LPFCSLD--CYFPRCNH 203 (253)
Q Consensus 171 ~~Pv~s~--~CgHvYek~aI-~~~i~~~--~~~~~CPv 203 (253)
+.|++|. .||..|....- ..+++.. .+..+|++
T Consensus 10 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 47 (48)
T 2ent_A 10 EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47 (48)
T ss_dssp CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5688997 89999987554 4445422 34566764
No 318
>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2ybb_Q* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* ...
Probab=24.54 E-value=21 Score=27.11 Aligned_cols=14 Identities=21% Similarity=0.050 Sum_probs=11.7
Q ss_pred cCCcccCCCCcccc
Q 025405 171 AEPVRRYQILQIYP 184 (253)
Q Consensus 171 ~~Pv~s~~CgHvYe 184 (253)
-.|.||..|||+|-
T Consensus 77 g~~~RC~eCG~~fk 90 (98)
T 1v54_F 77 GEAQRCPSCGTHYK 90 (98)
T ss_dssp SSCEECTTTCCEEE
T ss_pred CCceECCCCCeEEE
Confidence 45889999999994
No 319
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=24.25 E-value=32 Score=19.37 Aligned_cols=19 Identities=16% Similarity=0.050 Sum_probs=13.1
Q ss_pred cCCcccC--CCCcccchhhHh
Q 025405 171 AEPVRRY--QILQIYPRFSFL 189 (253)
Q Consensus 171 ~~Pv~s~--~CgHvYek~aI~ 189 (253)
+.|+.|. .||..|...+-+
T Consensus 6 ~k~~~C~~~~C~k~f~~~~~L 26 (37)
T 1va1_A 6 KKQHICHIQGCGKVYGKTSHL 26 (37)
T ss_dssp CCCEECCSTTCCCEESCHHHH
T ss_pred CCCCCCCCCCCCCccCCHHHH
Confidence 4578887 488888765543
No 320
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=23.00 E-value=22 Score=26.08 Aligned_cols=14 Identities=21% Similarity=0.356 Sum_probs=11.7
Q ss_pred cCCcccCCCCcccc
Q 025405 171 AEPVRRYQILQIYP 184 (253)
Q Consensus 171 ~~Pv~s~~CgHvYe 184 (253)
-.|.||..|||+|-
T Consensus 54 g~~~RC~eCG~~fk 67 (80)
T 2odx_A 54 NEVARCWECGSVYK 67 (80)
T ss_dssp TCEEECSSSCCEEE
T ss_pred CCCeECCCCCeEEE
Confidence 35789999999995
No 321
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=22.27 E-value=38 Score=18.91 Aligned_cols=18 Identities=11% Similarity=-0.033 Sum_probs=12.4
Q ss_pred cCCcccC--CCCcccchhhH
Q 025405 171 AEPVRRY--QILQIYPRFSF 188 (253)
Q Consensus 171 ~~Pv~s~--~CgHvYek~aI 188 (253)
+.|+.|. .||..|...+-
T Consensus 4 ~k~~~C~~~~C~k~f~~~~~ 23 (38)
T 1bhi_A 4 DKPFLCTAPGCGQRFTNEDH 23 (38)
T ss_dssp CCCEECCCTTTCCEESSHHH
T ss_pred CcceECCCCCCCcccCCHHH
Confidence 4577787 58888876543
No 322
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=22.17 E-value=1.5e+02 Score=18.49 Aligned_cols=29 Identities=17% Similarity=0.196 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 025405 57 VKELEDATIQLMEAFGDCTHHSAAIQSVG 85 (253)
Q Consensus 57 vkeLe~~v~eL~~~~~e~~~~~~Alq~l~ 85 (253)
+++|++-+.+|+.-..++..-..-|+.+.
T Consensus 3 MnQLE~KVEeLl~~~~~Le~eV~RLk~ll 31 (36)
T 1kd8_B 3 VKQLKAKVEELKSKLWHLKNKVARLKKKN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 67899999999886666666655555543
No 323
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=22.12 E-value=20 Score=26.39 Aligned_cols=28 Identities=11% Similarity=0.084 Sum_probs=21.3
Q ss_pred cccCCCCccccccccCC----cccCCCCcccchh
Q 025405 157 NISCPLSGKPITELAEP----VRRYQILQIYPRF 186 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~P----v~s~~CgHvYek~ 186 (253)
.++||-.+++. +.+| ..|..||++|.-.
T Consensus 27 ~y~Cp~CG~~~--v~r~atGiW~C~~Cg~~~agg 58 (83)
T 1vq8_Z 27 DHACPNCGEDR--VDRQGTGIWQCSYCDYKFTGG 58 (83)
T ss_dssp CEECSSSCCEE--EEEEETTEEEETTTCCEEECC
T ss_pred cCcCCCCCCcc--eeccCCCeEECCCCCCEecCC
Confidence 78899988743 5666 5699999998654
No 324
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.86 E-value=75 Score=22.91 Aligned_cols=29 Identities=17% Similarity=0.248 Sum_probs=19.3
Q ss_pred cccCCCCccccccccCCcccCC--CCcccchhhHh
Q 025405 157 NISCPLSGKPITELAEPVRRYQ--ILQIYPRFSFL 189 (253)
Q Consensus 157 n~~CPlT~~~i~~l~~Pv~s~~--CgHvYek~aI~ 189 (253)
.+-||+.-.. +.|++|.. ||..|.+.+-+
T Consensus 15 ~~~~~~~~sG----EKPYkC~~~~CgKaFsr~s~L 45 (73)
T 1x3c_A 15 SLEFPTRYSP----YRPYRCVHQGCFAAFTIQQNL 45 (73)
T ss_dssp CCCCSSSSCS----SCSCBCCSTTCCCBCSSHHHH
T ss_pred CccccccccC----CCCeECCCCCcChhHcCHHHH
Confidence 4456666432 78888864 88888776543
No 325
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=21.04 E-value=35 Score=23.11 Aligned_cols=30 Identities=13% Similarity=0.049 Sum_probs=18.8
Q ss_pred cCCCCcc-cccc--ccCCcccCCCCcccchhhH
Q 025405 159 SCPLSGK-PITE--LAEPVRRYQILQIYPRFSF 188 (253)
Q Consensus 159 ~CPlT~~-~i~~--l~~Pv~s~~CgHvYek~aI 188 (253)
+||-.+. +|.. =.--+.|..||.|++...|
T Consensus 13 ~Cp~C~~~~lv~D~~~ge~vC~~CGlVl~e~~i 45 (58)
T 1dl6_A 13 TCPNHPDAILVEDYRAGDMICPECGLVVGDRVI 45 (58)
T ss_dssp SBTTBSSSCCEECSSSCCEECTTTCCEECCSCC
T ss_pred cCcCCCCCceeEeCCCCeEEeCCCCCEEecccc
Confidence 6888764 2211 0125778899999987655
No 326
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=21.02 E-value=1.6e+02 Score=18.36 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 025405 57 VKELEDATIQLMEAFGDCTHHSAAIQSVG 85 (253)
Q Consensus 57 vkeLe~~v~eL~~~~~e~~~~~~Alq~l~ 85 (253)
+++||+-+.+|+.-..++..-..-|+.+.
T Consensus 3 MnQLE~kVEeLl~~~~~Le~EV~RL~~ll 31 (36)
T 1kd8_A 3 VKQLEAEVEEIESEVWHLENEVARLEKEN 31 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 57888999988876666666555555543
No 327
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=20.53 E-value=1.5e+02 Score=18.33 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHHHH
Q 025405 57 VKELEDATIQLMEAFGDCTHHSAAIQSV 84 (253)
Q Consensus 57 vkeLe~~v~eL~~~~~e~~~~~~Alq~l 84 (253)
+++||+-+.+|+.-..++..-..-|+++
T Consensus 3 MnQLEdKvEeLl~~~~~L~~EV~RLk~l 30 (34)
T 2bni_A 3 MKQIEDKLEEILSKGHHICNELARIKKL 30 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 5689999999987666665555555444
No 328
>3ajm_A Programmed cell death protein 10; adaptor protein, dimerization, four-helix bundle, apoptosis; HET: 4IP; 2.30A {Homo sapiens} PDB: 3l8i_A 3rqe_A 3rqf_A 3rqg_A 3l8j_A
Probab=20.04 E-value=2.4e+02 Score=24.23 Aligned_cols=14 Identities=14% Similarity=0.150 Sum_probs=7.7
Q ss_pred chHHHHHHHHHHhh
Q 025405 95 TDFKKLLVDEDAKS 108 (253)
Q Consensus 95 ~df~k~~~~e~~~~ 108 (253)
+.|.|.+.+.+++|
T Consensus 161 VkySKrFS~TLKeY 174 (213)
T 3ajm_A 161 VKYSKSFSDTLKTY 174 (213)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHhhHhhHHHHHH
Confidence 44555666655553
Done!