BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025407
(253 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/234 (61%), Positives = 165/234 (70%), Gaps = 21/234 (8%)
Query: 28 GGLARLRSAPASWIDALLEEELEDPLKPNQCLTQLLS--SGDPVSVTAGLSLSQSQLDQV 85
GLAR RSAPA+W++ALLE++ EDPLKPN CLTQLL+ S D S A L
Sbjct: 24 AGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLAANSSDLDSAPADHPLFDPN-PSP 82
Query: 86 GFQRQNSSPADLF------DGYFSNYATPSSYDYVDVSPNSNKRAREDNNTQFPSPTAKL 139
F RQNSSP + +G++++Y SS +D+SP S D FP
Sbjct: 83 AFHRQNSSPPEFLAPSGIAEGFYTSYPLNSS-PTLDISPTSKPSTDVDAQNFFP------ 135
Query: 140 NFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRI 199
F LK E SG VS+L+DM+MEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRI
Sbjct: 136 KFSPQLKREGSG-----VSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRI 190
Query: 200 SDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
SDRIRKLQ++VPNMDKQTNTADMLEEAVEYVKFLQKQI+ELTEHQRRCKC K+
Sbjct: 191 SDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE 244
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/272 (58%), Positives = 187/272 (68%), Gaps = 45/272 (16%)
Query: 1 MQPTAGGSSSSSGGGGGGVGGRGELSRGGLARLRSAPASWIDALLEEELEDPLKPNQCLT 60
MQPT GSS++S GGG GG GG+AR RSAPA+WI+ALL EE EDPLK +Q LT
Sbjct: 1 MQPTPAGSSNTSAGGGSAGGG----GGGGIARFRSAPATWIEALLGEEEEDPLKQSQNLT 56
Query: 61 QLLSSGDP-----VSVTAGLSLSQSQLDQV--GFQRQNSSPADLF--------DGYFSNY 105
+LL+S P V A + + L + GFQRQNSSP D GYFS+Y
Sbjct: 57 ELLTSNTPSSRDSVPFNASSAAVEPGLFEPVGGFQRQNSSPTDFLRSSGIGSDQGYFSSY 116
Query: 106 ATPSSYDYV----DVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLV 161
S+Y+Y+ DVSP S+KRARE K EQ+G P S+L+
Sbjct: 117 GNASNYEYMTPNMDVSP-SDKRARE-------------------KGEQTG--PLRASSLI 154
Query: 162 DMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
+M+M+KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ+LVPNMDKQTNTAD
Sbjct: 155 EMEMDKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAD 214
Query: 222 MLEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
ML+EA+ YVKFLQ+QI+ELTE QR+CKC AK+
Sbjct: 215 MLDEALAYVKFLQRQIQELTEQQRKCKCIAKE 246
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 150/251 (59%), Positives = 177/251 (70%), Gaps = 38/251 (15%)
Query: 24 ELSRGGLARLRSAPASWIDALLEEELEDPLKPNQCLTQLLSSGD----------PVSVTA 73
E+SR GL+R+RSAPA+WI+ LLEE+ E+ LKPN CLT+LL+ + P SV
Sbjct: 21 EVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTELLTGNNSGGVITSHEFPSSVEQ 80
Query: 74 GLSLSQSQLDQVGFQRQNSSPADLF-------DGYFSNYATPSSYDY----VDVSPNSNK 122
GL Q GF RQNSSPAD DGYFS++ P++YDY VD+SP K
Sbjct: 81 GLYNYNHQGG--GFHRQNSSPADFLSGSGVGTDGYFSSFGIPANYDYLSTNVDISPT--K 136
Query: 123 RAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRG 182
R+R D TQF S LK EQ + GGVS ++DM+M+KL+E SVPCRVRAKRG
Sbjct: 137 RSR-DMETQFSS---------QLKEEQ---MSGGVSGMMDMNMDKLIEGSVPCRVRAKRG 183
Query: 183 CATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTE 242
CATHPRSIAERVRRTRISDRIR+LQ+LVPNMDKQTNTADMLEEAVEYVK LQ QI+ELTE
Sbjct: 184 CATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQIQELTE 243
Query: 243 HQRRCKCSAKD 253
Q+RCKC K+
Sbjct: 244 QQKRCKCKPKE 254
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/256 (58%), Positives = 178/256 (69%), Gaps = 44/256 (17%)
Query: 24 ELSRGGLARLRSAPASWIDALLEEELEDPLKPNQCLTQLLS----SGDPV---------- 69
E+SR GL+R+RSAPA+WI+ LLEE+ E+ LKPN CLT+LL+ SG +
Sbjct: 20 EVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTELLTGNNNSGGVITSRDDSFEFL 79
Query: 70 -SVTAGLSLSQSQLDQVGFQRQNSSPADLF-------DGYFSNYATPSSYDY----VDVS 117
SV GL + GF RQNSSPAD DGYFSN+ P++YDY VD+S
Sbjct: 80 SSVEQGL---YNHHQGGGFHRQNSSPADFLSGSGSGTDGYFSNFGIPANYDYLSTNVDIS 136
Query: 118 PNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRV 177
P KR+R D TQF S LK EQ + GG+S ++DM+M+K+ EDSVPCRV
Sbjct: 137 PT--KRSR-DMETQFSS---------QLKEEQ---MSGGISGMMDMNMDKIFEDSVPCRV 181
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RAKRGCATHPRSIAERVRRTRISDRIR+LQ+LVPNMDKQTNTADMLEEAVEYVK LQ QI
Sbjct: 182 RAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQI 241
Query: 238 EELTEHQRRCKCSAKD 253
+ELTE Q+RCKC K+
Sbjct: 242 QELTEQQKRCKCKPKE 257
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 163/272 (59%), Positives = 197/272 (72%), Gaps = 27/272 (9%)
Query: 1 MQPTAGGSSSSSGGGGGGVGGRGELSRGGLARLRSAPASWIDALLEEELEDPLKPNQCLT 60
M P GSS++SGGG GG GG G GGL RLRSAPA+W+ ALLEEE EDPLK NQ LT
Sbjct: 1 MHPAPAGSSNTSGGGCGGGGGGGGGGGGGLPRLRSAPATWLLALLEEEEEDPLKQNQNLT 60
Query: 61 QLLSSGDPVSV-TAGLSLSQSQLDQ------VGFQRQNSSPADLF--------DGYFSNY 105
QLL+S P S +A + S + ++ GFQRQNSSPAD GYFSNY
Sbjct: 61 QLLTSNAPSSRNSAPFNASSAAVEPGLYETGSGFQRQNSSPADFLGNSGIGSDQGYFSNY 120
Query: 106 ATPSSYDYV----DVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLV 161
S+Y+Y+ +VSP S KRARE + +P A+ + LK Q+G + S+L+
Sbjct: 121 GIASNYEYMPPNMEVSP-SAKRARE---LELQNPPAR--YPPPLKGAQTGSL--RASSLI 172
Query: 162 DMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
+M+M+KLLE+SVPC++RAKRGCATHPRSIAERVRRTRISDRIRKLQ+LVPNMDKQTNTAD
Sbjct: 173 EMEMDKLLEESVPCKIRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAD 232
Query: 222 MLEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
MLEEAV+YVKFLQ+QI+ELTE QR+CKC AK+
Sbjct: 233 MLEEAVDYVKFLQRQIQELTEQQRKCKCMAKE 264
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/236 (61%), Positives = 172/236 (72%), Gaps = 20/236 (8%)
Query: 32 RLRSAPASWIDALLEEELEDPLKPNQCLTQLLS--SGD-PVSVTAG---LSLSQSQLDQV 85
R+RSAPA+W++ALLEE+ E+ LKPN LT LL+ S D P S ++ + + Q Q
Sbjct: 33 RIRSAPATWLEALLEEDEEESLKPNLGLTDLLTGNSNDLPTSRSSFEFPIPVEQGLYQQG 92
Query: 86 GFQRQNSSPADLF---DGYFSNYATPSSYDY----VDVSPNSNKRAREDNNTQFPSPTAK 138
GF RQNS+PAD DG+ ++ P++YDY +DVSP S KR+RE F SP
Sbjct: 93 GFHRQNSTPADFLSGSDGFIQSFGIPANYDYLSGNIDVSPGS-KRSRE-MEALFSSP--- 147
Query: 139 LNFHSHLKVEQS-GQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRT 197
F S +K EQS GQVP GVS + DM+ME L+EDSV RVRAKRGCATHPRSIAERVRRT
Sbjct: 148 -EFTSQMKGEQSSGQVPAGVSGMTDMNMENLMEDSVAFRVRAKRGCATHPRSIAERVRRT 206
Query: 198 RISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
RISDRIRKLQ+LVPNMDKQTNTADMLEEAVEYVK LQ+QI+ELTE Q+RC C K+
Sbjct: 207 RISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKRCTCIPKE 262
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/242 (59%), Positives = 170/242 (70%), Gaps = 32/242 (13%)
Query: 32 RLRSAPASWIDALLEEELEDPLKPNQCLTQLLS--SGD----------PVSVTAGLSLSQ 79
R+RSAPA+W++ALLEE+ E+ LKPN LT LL+ S D P+ V GL
Sbjct: 31 RIRSAPATWLEALLEEDEEESLKPNLGLTDLLTGNSNDLPTSRGSFEFPIPVEQGL---- 86
Query: 80 SQLDQVGFQRQNSSPADLF---DGYFSNYATPSSYDY----VDVSPNSNKRAREDNNTQF 132
Q GF RQNS+PAD DG+ ++ ++YDY +DVSP S KR+RE F
Sbjct: 87 --YQQGGFHRQNSTPADFLSGSDGFIQSFGIQANYDYLSGNIDVSPGS-KRSRE-MEALF 142
Query: 133 PSPTAKLNFHSHLKVEQS-GQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIA 191
SP F S +K EQS GQVP GVS++ DM+ME L+EDSV RVRAKRGCATHPRSIA
Sbjct: 143 SSP----EFTSQMKGEQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRAKRGCATHPRSIA 198
Query: 192 ERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
ERVRRTRISDRIRKLQ+LVPNMDKQTNTADMLEEAVEYVK LQ+QI+ELTE Q+RC C
Sbjct: 199 ERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKRCTCIP 258
Query: 252 KD 253
K+
Sbjct: 259 KE 260
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 166/253 (65%), Gaps = 39/253 (15%)
Query: 30 LARLRSAPASWIDALLEEELED--------------PLKP------NQCLTQLLSSGDPV 69
LAR RSAPA+W++ALLE+E D PL P T++ S+G
Sbjct: 17 LARFRSAPATWLEALLEDEETDVVLDPPVLATSNKPPLHPPVGASSQPQSTEVSSAGGRY 76
Query: 70 SVTAGL--SLSQSQLDQVGFQRQNSSPADLF-DGYFSNYATPSSYDYV------DVSPNS 120
+ GL S+ G RQNSSPA+ DGYFS++ P++YDY+ DVS +
Sbjct: 77 AADLGLLDSVGSGAGGLSGLLRQNSSPAEFLSDGYFSSFGIPTNYDYLMSSSPLDVSESP 136
Query: 121 NKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAK 180
+KR RE ++ + A + G+ GG+S L+D +M+KL EDSV CRVRAK
Sbjct: 137 SKRPREADSNAAKASLAVVK----------GEQGGGISGLLDAEMDKLAEDSVLCRVRAK 186
Query: 181 RGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
RGCATHPRSIAERVRRTRISDRIRKLQ+LVPNMDKQTNTADMLEEAVEYVKFLQKQI+EL
Sbjct: 187 RGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQKQIQEL 246
Query: 241 TEHQRRCKCSAKD 253
TE Q++CKCSAK+
Sbjct: 247 TEQQKKCKCSAKE 259
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/275 (52%), Positives = 179/275 (65%), Gaps = 46/275 (16%)
Query: 1 MQPTAGGSSSSSGGGGGGVGGRGELSRGGLARLRSAPASWIDALLEEELEDPL-----KP 55
MQPT GG E++R LAR RSAPA+W+D LLEEE + KP
Sbjct: 1 MQPTRGG----------------EVNR--LARFRSAPATWLDTLLEEEEGEEEDDDSLKP 42
Query: 56 NQCLTQLLSSGDPVSVTAGLSLSQSQLDQV------GFQRQNSSPADLF------DGYFS 103
Q LTQLL+ + +G + S GF RQ+S P + +GYFS
Sbjct: 43 TQSLTQLLAGSGGPAGGSGGYIPASDPSMFDGAGAQGFLRQSSLPTEFLSQINSSEGYFS 102
Query: 104 NYATPSSYDY-----VDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVS 158
++ P+ +DY VD SP + KRARE S ++ F S K EQS ++ G V+
Sbjct: 103 SFGIPAGFDYAASPAVDGSP-TGKRARE-----LESRSSSRKFSSQSKGEQSSRLTGSVA 156
Query: 159 NLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTN 218
+L+D+DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ+LVPNMDKQTN
Sbjct: 157 SLLDVDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTN 216
Query: 219 TADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
TADMLEEAVEYVKFLQ++I+EL+EHQ++C C A++
Sbjct: 217 TADMLEEAVEYVKFLQQKIQELSEHQKKCTCLARE 251
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 137/179 (76%), Gaps = 17/179 (9%)
Query: 86 GFQRQNSSPADLF------DGYFSNYATPSSYDY-----VDVSPNSNKRAREDNNTQFPS 134
GF RQ+S P + +GYFS++ P+ +DY VD SP + KRARE S
Sbjct: 9 GFLRQSSLPTEFLSQINSSEGYFSSFGIPAGFDYAASPAVDGSP-TGKRARE-----LES 62
Query: 135 PTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERV 194
++ F S K EQS ++ G V++L+D+DMEKLLEDSVPCRVRAKRGCATHPRSIAERV
Sbjct: 63 RSSSRKFSSQSKGEQSSRLTGSVASLLDVDMEKLLEDSVPCRVRAKRGCATHPRSIAERV 122
Query: 195 RRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
RRTRISDRIRKLQ+LVPNMDKQTNTADMLEEAVEYVKFLQ++I+EL+EHQ++C C A++
Sbjct: 123 RRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELSEHQKKCTCLARE 181
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 112/171 (65%), Positives = 128/171 (74%), Gaps = 24/171 (14%)
Query: 91 NSSPADLF----DGYFSNYATPS-SYDY-----VDVSPNSNKRAREDNNTQFPSPTAKLN 140
NSSPAD DGYFS++ PS +YDY +D+SP S KR RED++ +F
Sbjct: 2 NSSPADFLSGSVDGYFSSFGIPSGNYDYMGSSGIDISP-SGKRLREDDSAKFGH------ 54
Query: 141 FHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRIS 200
LK EQ G +L+D+D+E++LEDSVPCRVRAKRGCATHPRSIAERVRRTRIS
Sbjct: 55 ---QLKEEQGT----GAGSLLDLDLERMLEDSVPCRVRAKRGCATHPRSIAERVRRTRIS 107
Query: 201 DRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
DRIRKLQ+LVPNMDKQTNTADMLEEAVEYVK LQKQIEEL EHQR+C C A
Sbjct: 108 DRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQIEELMEHQRKCTCMA 158
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 136/249 (54%), Positives = 165/249 (66%), Gaps = 33/249 (13%)
Query: 26 SRGGLARLRSAPASWIDALLEEELE--DPLKPNQCLTQLLSSGD--------PVSVTAGL 75
+R GLAR RSAP +W++ALLEEE E DPLKP Q LTQLL+S P S +
Sbjct: 18 NRVGLARFRSAPPTWLEALLEEEEEEEDPLKPTQTLTQLLASNTTRNSLPFGPSSSSVVE 77
Query: 76 SLSQSQLDQVG----FQRQNSSPADLF-------DGYFSNYATPSSYDYV----DVSPNS 120
S L + G FQRQ+SSPAD DGYF+N+ P +Y+Y+ DVSP S
Sbjct: 78 PGGGSNLFEPGGGGGFQRQHSSPADFLVNSGIGNDGYFANFGIPPNYEYISPNMDVSP-S 136
Query: 121 NKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGG---VSNLVDMDMEKLLEDSVPCRV 177
KR R+ Q +A + LK EQS QVPGG +S+L++M+MEKLLEDSVPCRV
Sbjct: 137 GKRTRD---VQLQHSSAN-KYPPLLKGEQSSQVPGGGDGMSSLIEMEMEKLLEDSVPCRV 192
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RAKRGCATHPRSIAERVRRTRISDRIRKLQ+LVPNMDKQTNTADML+EAV + ++
Sbjct: 193 RAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVGNSRNIKGNA 252
Query: 238 EELTEHQRR 246
++ R+
Sbjct: 253 HAWPKNNRK 261
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/226 (46%), Positives = 133/226 (58%), Gaps = 51/226 (22%)
Query: 30 LARLRSAPASWIDALLEEELEDPLKPNQ-----CLTQLLSSGDPVSVTAGLSLSQSQLDQ 84
L R S PASW+++ + +E ED + Q TQLLS+ + V AG
Sbjct: 12 LTRFNSTPASWLESFILKE-EDEVDERQQDHSLSFTQLLSNNN---VAAGPG-------- 59
Query: 85 VGFQRQNSSPADLFDGYFSNYATPSSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSH 144
G S P Y+S+ TP+S +V+ N + ED
Sbjct: 60 PGPSTPESHP--YLSDYYSSPLTPTS---ANVANNPFTQGVED----------------- 97
Query: 145 LKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIR 204
G++ +D+ M+K+LEDSVPC++RAKRG ATHPRSIAERVRRTRISDRIR
Sbjct: 98 ----------SGIA--IDLKMDKILEDSVPCKIRAKRGFATHPRSIAERVRRTRISDRIR 145
Query: 205 KLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCS 250
KLQ+LVPNMDKQTNTA+ML+EAV YVKFLQ QIEEL+E QRRCKC+
Sbjct: 146 KLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEELSEQQRRCKCT 191
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/86 (89%), Positives = 83/86 (96%)
Query: 168 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAV 227
+LEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ+LVPNMDKQTNTADML+EAV
Sbjct: 72 MLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAV 131
Query: 228 EYVKFLQKQIEELTEHQRRCKCSAKD 253
YVKFLQKQIEEL+EHQRRCKC ++
Sbjct: 132 AYVKFLQKQIEELSEHQRRCKCVVQE 157
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 32/97 (32%)
Query: 1 MQPTAGGSSSSSGGGGGGVGGRGELSRGGLARLRSAPASWIDALL---EEELEDPLKPNQ 57
MQPT+GG GGLAR RSAPASW++++L EEE EDPL
Sbjct: 1 MQPTSGG--------------------GGLARFRSAPASWLESVLLKEEEEEEDPLS--- 37
Query: 58 CLTQLLSSGDPVSVTAGLSLSQSQLDQVGFQRQNSSP 94
TQLLS+ D S SQ QL ++ +P
Sbjct: 38 -FTQLLSTIDDAP-----SHSQHQLYGAALSNKDKTP 68
>gi|339716190|gb|AEJ88334.1| putative MYC protein [Tamarix hispida]
Length = 269
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/249 (44%), Positives = 138/249 (55%), Gaps = 72/249 (28%)
Query: 29 GLARLRSAPASWIDALLEEELED--PLKPNQ----CLTQLLSSGD-----------PVSV 71
G AR RSAPA+W++ALL+++L P K LTQLL++G P +
Sbjct: 24 GPARFRSAPAAWLEALLDDDLSQDDPTKLGHNHPGGLTQLLTAGTVQNPASSHPPAPHTP 83
Query: 72 TAGLSLSQS-----------------------------------QLDQVGFQRQNSSPAD 96
T+G S + + +GF R NSSPAD
Sbjct: 84 TSGASTTTNAPGAAGARNSGSSYLSSAADPGFFDSGGDSAIGGVHSSNLGFHRMNSSPAD 143
Query: 97 LF----DGYFSNYATPS-SYDY-----VDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLK 146
DGYFS++ PS +YDY VDVSP S KR+RED++ +F LK
Sbjct: 144 FLSGSVDGYFSSFGIPSGNYDYLGSSGVDVSP-SRKRSREDDSAKF---------GHQLK 193
Query: 147 VEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKL 206
EQ + G +L D++M+K+LEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKL
Sbjct: 194 EEQGEHISAGAGSLFDLEMDKMLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKL 253
Query: 207 QDLVPNMDK 215
Q+LVPNMDK
Sbjct: 254 QELVPNMDK 262
>gi|147795431|emb|CAN77105.1| hypothetical protein VITISV_037095 [Vitis vinifera]
Length = 238
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 143/237 (60%), Gaps = 46/237 (19%)
Query: 1 MQPTAGGSSSSSGGGGGGVGGRGELSRGGLARLRSAPASWIDALLEEELEDPL-----KP 55
MQPT GG E++R LAR RSAPA+W+D LLEEE + KP
Sbjct: 1 MQPTRGG----------------EVNR--LARFRSAPATWLDTLLEEEEGEEEDDDSLKP 42
Query: 56 NQCLTQLLSSGDPVSVTAGLSLSQSQLDQV------GFQRQNSSPADLF------DGYFS 103
Q LTQLL+ + +G + S GF RQ+S P + +GYFS
Sbjct: 43 TQSLTQLLAGSGGPAGGSGGYIPASDPSMFDGAGAQGFLRQSSLPTEFLSQINSSEGYFS 102
Query: 104 NYATPSSYDY-----VDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVS 158
++ P+ +DY VD SP + KRARE S ++ F S K EQS ++ G V+
Sbjct: 103 SFGIPAGFDYAASPAVDGSP-TGKRARE-----LESRSSSRKFSSQSKGEQSSRLTGSVA 156
Query: 159 NLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
+L+D+DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ+LVPNMDK
Sbjct: 157 SLLDVDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDK 213
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 80/88 (90%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D+E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQDLVPNMD QTNTADML
Sbjct: 291 DIEQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADML 350
Query: 224 EEAVEYVKFLQKQIEELTEHQRRCKCSA 251
+ AV+Y+K LQ+Q++ L E + RC+CS+
Sbjct: 351 DLAVQYIKDLQEQVKALEESRARCRCSS 378
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 79/84 (94%)
Query: 169 LEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVE 228
L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQDLVPNMDKQTNT+DML+ AV+
Sbjct: 331 LQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVD 390
Query: 229 YVKFLQKQIEELTEHQRRCKCSAK 252
Y+K LQ+Q+E L+E++ +C C++K
Sbjct: 391 YIKDLQRQVETLSENRSKCTCASK 414
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 80/88 (90%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D+E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQDLVPNMD QTNTADML
Sbjct: 290 DIEQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADML 349
Query: 224 EEAVEYVKFLQKQIEELTEHQRRCKCSA 251
+ AV+Y+K LQ+Q++ L E + RC+CS+
Sbjct: 350 DLAVQYIKDLQEQVKTLEETRARCRCSS 377
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Query: 162 DMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQT-NTA 220
++ ME+ L+D+VPC+VRAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVPN DKQT N A
Sbjct: 453 ELAMEEFLQDAVPCKVRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIA 512
Query: 221 DMLEEAVEYVKFLQKQIEELTEHQRRCKCS 250
DML+EAVEYVK LQKQ++EL E++ +C C+
Sbjct: 513 DMLDEAVEYVKSLQKQVQELAENRAKCTCT 542
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
MEK L+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVPNMDKQTNTADM
Sbjct: 307 MEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADM 366
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AVEY+K LQKQ LT+++ CKC K
Sbjct: 367 LDLAVEYIKDLQKQYNTLTDNRAHCKCLGK 396
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/97 (65%), Positives = 82/97 (84%)
Query: 153 VPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPN 212
+P VS++ ++ L+D+VPCR+RAKRGCATHPRSIAERVRRTRIS+R+RKLQDLVPN
Sbjct: 258 LPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPN 317
Query: 213 MDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKC 249
MDKQTNTADML+ AV+Y+K LQKQ + L++++ C C
Sbjct: 318 MDKQTNTADMLDLAVDYIKELQKQFKTLSDNRANCVC 354
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
MEK L+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVPNMDKQTNTADM
Sbjct: 296 MEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADM 355
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AVEY+K LQKQ LT+++ CKC K
Sbjct: 356 LDLAVEYIKDLQKQYNTLTDNRAHCKCLGK 385
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 80/90 (88%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ DSVPC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQDLVPNMDKQTNTADM
Sbjct: 326 IEKFLQLSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADM 385
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AVEY+K LQ Q++ L++++ +C CS K
Sbjct: 386 LDLAVEYIKDLQNQVQTLSDNRAKCTCSHK 415
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 82/91 (90%), Gaps = 2/91 (2%)
Query: 163 MDMEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTA 220
+ M+KLL+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVPNMDKQTNTA
Sbjct: 284 ITMKKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTA 343
Query: 221 DMLEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
DML+ AVEY+K LQKQ + L+E + +C+C++
Sbjct: 344 DMLDLAVEYIKDLQKQFKTLSEKRAKCECTS 374
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 107/155 (69%), Gaps = 4/155 (2%)
Query: 101 YFSNYATP-SSYDYVDVSPN--SNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGV 157
++S++ P S++ +S N S KR +E+ N + +L +H+ + +P
Sbjct: 193 FYSSHGFPYGSWNDSHLSENFSSMKREQENGNLFSNAQNGELGNRAHV-LSHHLSLPKTA 251
Query: 158 SNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQT 217
+V M+ +DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVPNMDKQT
Sbjct: 252 MEMVAMEKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQT 311
Query: 218 NTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
NTADML+ AV Y+K LQKQ + L++++ CKC +K
Sbjct: 312 NTADMLDLAVVYIKDLQKQYKTLSDNRANCKCLSK 346
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 96/135 (71%), Gaps = 2/135 (1%)
Query: 119 NSNKRAREDNNTQFPSP-TAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRV 177
N KR +DN F + +L HL + +P ++V M+ +DSVPC++
Sbjct: 213 NGMKRDPDDNGKPFSAAQNGELGNRVHL-LSHHLSLPKASVDMVAMEKFLHFQDSVPCKI 271
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVPNMDKQTNTADML+ AV+Y+K LQKQ
Sbjct: 272 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQY 331
Query: 238 EELTEHQRRCKCSAK 252
+ L++++ CKC +K
Sbjct: 332 KTLSDNRANCKCLSK 346
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 79/89 (88%), Gaps = 2/89 (2%)
Query: 163 MDMEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTA 220
+ MEKLL+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVP+MDKQTNTA
Sbjct: 278 ITMEKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTA 337
Query: 221 DMLEEAVEYVKFLQKQIEELTEHQRRCKC 249
DML+ AVEY+K LQKQ + L+E + CKC
Sbjct: 338 DMLDLAVEYIKDLQKQFKTLSEKRANCKC 366
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
MEK L+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVPNMDKQTNTADM
Sbjct: 182 MEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADM 241
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AVEY+K LQKQ LT+++ CKC K
Sbjct: 242 LDLAVEYIKDLQKQYNTLTDNRAHCKCLGK 271
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 80/90 (88%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ DSVPC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQDLVPNMDKQTNT+DM
Sbjct: 341 IEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDM 400
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AVEY+K LQ Q+E L++++ +C CS K
Sbjct: 401 LDLAVEYIKDLQNQVETLSDNRAKCTCSHK 430
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ DSVPC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQDLVPNMDKQTNTADM
Sbjct: 323 IEKFLQLSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADM 382
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AVEY+K LQ Q+E L++++ +C C K
Sbjct: 383 LDLAVEYIKDLQNQVEALSDNRAKCTCLHK 412
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 82/88 (93%), Gaps = 2/88 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK+L+ DSVPC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQ+LVPNMDKQTNT+DM
Sbjct: 345 IEKILQFSDSVPCKLRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDM 404
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCS 250
L+ AVEY+K LQKQ++ L++++ +CKCS
Sbjct: 405 LDLAVEYIKGLQKQVQTLSDNRAKCKCS 432
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 82/88 (93%), Gaps = 2/88 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK+L+ DSVPC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQ+LVPNMDKQTNT+DM
Sbjct: 345 IEKILQFSDSVPCKLRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDM 404
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCS 250
L+ AVEY+K LQKQ++ L++++ +CKCS
Sbjct: 405 LDLAVEYIKGLQKQVQTLSDNRAKCKCS 432
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 81/90 (90%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVPNMDKQTNT+DM
Sbjct: 205 IEKYLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDM 264
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AV+Y+K LQKQ++ L++++ +C CS K
Sbjct: 265 LDLAVDYIKDLQKQVKTLSDNRAKCTCSNK 294
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 78/88 (88%), Gaps = 2/88 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ DSVPC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQDLVPNMDKQTNTADM
Sbjct: 319 IEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADM 378
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCS 250
L+ AV+Y+K LQKQ++ L++ +C CS
Sbjct: 379 LDLAVDYIKDLQKQVQTLSDCHAKCTCS 406
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC++RAKRGCATHPRSIAERVRRTRIS+RIRKLQ+LVPNMDKQTNTADM
Sbjct: 308 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADM 367
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AV+Y+K LQKQ++ L + + C CSAK
Sbjct: 368 LDLAVDYIKDLQKQVKGLNDSRANCTCSAK 397
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/99 (64%), Positives = 80/99 (80%)
Query: 153 VPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPN 212
VP S + ++ +D+VPC++RAKRGCATHPRSIAERVRRT+IS+RIRKLQ+LVPN
Sbjct: 268 VPKTSSEMATIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPN 327
Query: 213 MDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
MDKQTNT+DML+ AV+Y+K LQKQ++ L E Q C CSA
Sbjct: 328 MDKQTNTSDMLDLAVDYIKDLQKQVKVLKESQDNCTCSA 366
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 78/88 (88%), Gaps = 2/88 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ DSVPC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQDLVPNMDKQTNTADM
Sbjct: 316 IEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADM 375
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCS 250
L+ AV+Y+K LQKQ++ L++ +C CS
Sbjct: 376 LDLAVDYIKDLQKQVQTLSDCHAKCTCS 403
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC++RAKRGCATHPRSIAERVRRTRIS+RIRKLQ+LVPNMDKQTNTADM
Sbjct: 304 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADM 363
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AV+Y+K LQKQ++ L + + C CSAK
Sbjct: 364 LDLAVDYIKDLQKQVKGLNDSRANCTCSAK 393
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 87/110 (79%), Gaps = 3/110 (2%)
Query: 144 HLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRI 203
HL + +S S++V +D L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+
Sbjct: 249 HLSLPKSSST---ASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERM 305
Query: 204 RKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
RKLQ+LVPNMDKQTNT+DML+ AV+Y+K LQ+Q + L +++ CKC K+
Sbjct: 306 RKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 87/110 (79%), Gaps = 3/110 (2%)
Query: 144 HLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRI 203
HL + +S S++V +D L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+
Sbjct: 249 HLSLPKSSST---ASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERM 305
Query: 204 RKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
RKLQ+LVPNMDKQTNT+DML+ AV+Y+K LQ+Q + L +++ CKC K+
Sbjct: 306 RKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 87/110 (79%), Gaps = 3/110 (2%)
Query: 144 HLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRI 203
HL + +S S++V +D L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+
Sbjct: 270 HLSLPKSSST---ASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERM 326
Query: 204 RKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
RKLQ+LVPNMDKQTNT+DML+ AV+Y+K LQ+Q + L +++ CKC K+
Sbjct: 327 RKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 376
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 78/89 (87%), Gaps = 2/89 (2%)
Query: 165 MEKLL--EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L +DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+L PNMDKQTNTADM
Sbjct: 319 IEKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADM 378
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AVEY+K LQKQ++ L + + +C CS+
Sbjct: 379 LDLAVEYIKDLQKQVKTLNDTKVKCTCSS 407
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 86/105 (81%), Gaps = 11/105 (10%)
Query: 150 SGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDL 209
+G+ GG+ + E LL+DSVPCR+RAKRGCATHPRSIAERVRRTRIS+R+R+LQ+L
Sbjct: 394 TGRSSGGL-----LAAENLLQDSVPCRLRAKRGCATHPRSIAERVRRTRISERMRRLQEL 448
Query: 210 VPNMDK------QTNTADMLEEAVEYVKFLQKQIEELTEHQRRCK 248
VPNMDK QTNT+DML+EAVEY+KFLQKQ+++L E + +C+
Sbjct: 449 VPNMDKSLAVIQQTNTSDMLDEAVEYMKFLQKQVDDLQECREKCQ 493
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 81/106 (76%)
Query: 146 KVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRK 205
++ +P S + +D +D+VPC++RAKRGCATHPRSIAERVRRT+IS+RIRK
Sbjct: 254 RITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRK 313
Query: 206 LQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
LQ+LVPNMDKQTNT+DML+ AV+Y+K LQKQ++ L E Q C C A
Sbjct: 314 LQELVPNMDKQTNTSDMLDLAVDYIKELQKQVKVLKETQANCTCPA 359
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 75/84 (89%)
Query: 169 LEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVE 228
+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQDLVPNMDKQTNT+DML+ AV+
Sbjct: 336 FQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVD 395
Query: 229 YVKFLQKQIEELTEHQRRCKCSAK 252
Y+K LQ+Q + L+E++ RC C K
Sbjct: 396 YIKDLQRQFKALSENRARCTCLKK 419
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC++RAKRGCATHPRSIAERVRRTRIS+RIRKLQ+LVPNMDKQTNTADM
Sbjct: 55 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADM 114
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AV+Y+K LQKQ++ L + + C CSAK
Sbjct: 115 LDLAVDYIKDLQKQVKGLNDSRANCTCSAK 144
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 78/89 (87%), Gaps = 2/89 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC++RAKRGCATHPRSIAERVRRTRIS+RIRKLQ+LVPNMDKQTNTADM
Sbjct: 286 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADM 345
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AV+Y+K LQ+Q++ + E + C CSA
Sbjct: 346 LDLAVDYIKELQEQVKVINESRANCTCSA 374
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 78/89 (87%), Gaps = 2/89 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC++RAKRGCATHPRSIAERVRRTRIS+RIRKLQ+LVPNMDKQTNTADM
Sbjct: 293 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADM 352
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AV+Y+K LQ+Q++ + E + C CSA
Sbjct: 353 LDLAVDYIKELQEQVKVINESRASCTCSA 381
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 78/89 (87%), Gaps = 2/89 (2%)
Query: 165 MEKLL--EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L +DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+L PNMDKQTNTADM
Sbjct: 157 IEKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADM 216
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AVEY+K LQKQ++ L + + +C CS+
Sbjct: 217 LDLAVEYIKDLQKQVKTLNDTKVKCTCSS 245
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 87/107 (81%), Gaps = 3/107 (2%)
Query: 150 SGQVPGGVSNLVDMD-MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKL 206
SG+ GG + +M +EK L+ D+VPC++RAKRGCATHPRSIAERVRRT+IS+RIRKL
Sbjct: 295 SGKNKGGRAASAEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKL 354
Query: 207 QDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
Q+LVPNM+KQTNTADML+ AV+Y+K LQKQ++ L + + C CSA +
Sbjct: 355 QELVPNMEKQTNTADMLDLAVDYIKDLQKQVKVLNDGRASCTCSAGE 401
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 83/100 (83%)
Query: 153 VPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPN 212
+P +V M+ L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVPN
Sbjct: 6 LPKTSVEMVAMEKFLHLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPN 65
Query: 213 MDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
MDKQTNTADML+ AV+Y+K LQKQ + L++++ CKC +K
Sbjct: 66 MDKQTNTADMLDLAVDYIKDLQKQYKTLSDNRANCKCLSK 105
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 74/88 (84%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D +L +DSV CRVRAKRGCATHPRSIAER RRTRIS R+R+LQDLVPNMDKQTNT+DML
Sbjct: 287 DYLQLQQDSVACRVRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDML 346
Query: 224 EEAVEYVKFLQKQIEELTEHQRRCKCSA 251
+ AV+Y+K LQ QIE+L + Q C CSA
Sbjct: 347 DIAVDYIKVLQDQIEKLKQDQGNCSCSA 374
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 80/95 (84%)
Query: 158 SNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQT 217
S++ +D L+DSVPC+VRAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVPNMDKQT
Sbjct: 266 SDMASVDKFMQLQDSVPCKVRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQT 325
Query: 218 NTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
NT+DML+ AV+Y+K LQ+Q + L +++ CKC K
Sbjct: 326 NTSDMLDLAVDYIKDLQRQYKILNDNRANCKCKEK 360
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 78/89 (87%), Gaps = 2/89 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC++RAKRGCATHPRSIAERVRRTRIS+RIRKLQ+LVPNM+KQTNTADM
Sbjct: 305 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADM 364
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AV+Y+K LQKQ++ L + + C CSA
Sbjct: 365 LDLAVDYIKELQKQVKVLNDSRSSCTCSA 393
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 76/90 (84%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
MEK L DSVP ++RAKRGCATHPRSIAERVRRT+IS+R+RKLQDLVPNMDKQTNTADM
Sbjct: 318 MEKFLHFSDSVPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADM 377
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AV+Y+K LQKQ ++L + Q +C C K
Sbjct: 378 LDLAVDYIKDLQKQAQKLQDCQAKCTCPHK 407
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 78/89 (87%), Gaps = 2/89 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC++RAKRGCATHPRSIAERVRRTRIS+RIRKLQ+LVPNM+KQTNTADM
Sbjct: 304 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADM 363
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AV+Y+K LQKQ++ L + + C CSA
Sbjct: 364 LDLAVDYIKELQKQVKVLNDSRSSCTCSA 392
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 78/89 (87%), Gaps = 2/89 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC++RAKRGCATHPRSIAERVRRTRIS+RIRKLQ+LVPNM+KQTNTADM
Sbjct: 283 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADM 342
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AV+Y+K LQKQ++ L + + C CSA
Sbjct: 343 LDLAVDYIKELQKQVKVLNDSRSSCTCSA 371
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 77/89 (86%), Gaps = 2/89 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC++RAKRGCATHPRSIAERVRRT+IS+RIRKLQ+LVPNMDKQTNT+DM
Sbjct: 303 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDM 362
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AV+Y+K LQKQ++ L E + C C A
Sbjct: 363 LDLAVDYIKDLQKQVKALNESRASCTCPA 391
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 78/88 (88%), Gaps = 5/88 (5%)
Query: 150 SGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDL 209
+G+ GG+ + E LL+DSVPCR+RAKRGCATHPRSIAERVRRTRIS+R+R+LQ+L
Sbjct: 3 TGRSSGGL-----LAAENLLQDSVPCRLRAKRGCATHPRSIAERVRRTRISERMRRLQEL 57
Query: 210 VPNMDKQTNTADMLEEAVEYVKFLQKQI 237
VPNMDKQTNT+DML+EAVEY+KFLQKQ+
Sbjct: 58 VPNMDKQTNTSDMLDEAVEYMKFLQKQV 85
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 72/86 (83%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D +L +DSV CRVRAKRGCATHPRSIAER RRTRIS R+RKLQDLVPNMDKQTNT+DML
Sbjct: 282 DYLQLQQDSVACRVRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDML 341
Query: 224 EEAVEYVKFLQKQIEELTEHQRRCKC 249
+ AV+Y+K LQ QIE+L + Q C C
Sbjct: 342 DIAVDYIKVLQDQIEKLKQDQGNCSC 367
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 77/89 (86%), Gaps = 2/89 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC+VRAKRGCATHPRSIAERVRRT+IS+RIRKLQ+LVP+MDKQTNT+DM
Sbjct: 283 IEKFLQFQDAVPCKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDM 342
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AV+Y+K LQKQ++ L E + C C A
Sbjct: 343 LDLAVDYIKDLQKQVKALNESRASCTCPA 371
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 77/89 (86%), Gaps = 2/89 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC+VRAKRGCATHPRSIAERVRRT+IS+RIRKLQ+LVP+MDKQTNT+DM
Sbjct: 283 IEKFLQFQDAVPCKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDM 342
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AV+Y+K LQKQ++ L E + C C A
Sbjct: 343 LDLAVDYIKDLQKQVKALNESRASCTCPA 371
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ DSVPCR RAKRGCATHPRSIAERVRRTRIS+R+RKLQDLVPNMDKQTNT+DM
Sbjct: 18 IEKFLQFQDSVPCRTRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDM 77
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AV+Y+K LQ+Q++ L+E + RC C K
Sbjct: 78 LDLAVDYIKDLQRQVQTLSEIRARCACINK 107
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 79/91 (86%), Gaps = 3/91 (3%)
Query: 165 MEKLLE---DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
+EK L+ +SVPC++RAKRG ATHPRSIAERVRRTRIS+R+RKLQ+L PNMDKQTNTAD
Sbjct: 322 IEKFLDFQGNSVPCKIRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTAD 381
Query: 222 MLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
ML+ AVE++K LQKQ++ LT+ + +C CS+K
Sbjct: 382 MLDLAVEHIKDLQKQVKTLTDTKAKCTCSSK 412
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 77/89 (86%), Gaps = 2/89 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC++RAKRGCATHPRSIAERVRRT+IS+RIRKLQ+LVPNM+KQTNTADM
Sbjct: 146 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADM 205
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AV+Y+K LQKQ++ L + + C CS
Sbjct: 206 LDLAVDYIKDLQKQVKVLNDGRANCTCSG 234
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 76/90 (84%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ SVPC++RAKRG ATHPRSIAERVRRTRIS+R+RKLQDL PNMDKQTNTADM
Sbjct: 336 VEKFLQFQGSVPCKIRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADM 395
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AVEY+K LQKQ++ L + + +C C +K
Sbjct: 396 LDLAVEYIKDLQKQVKTLKDTKAKCTCPSK 425
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 77/89 (86%), Gaps = 2/89 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC+VRAKRGCATHPRSIAERVRRT+IS+RIRKLQ+LVP+MDKQTNT+DM
Sbjct: 180 IEKFLQFQDAVPCKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDM 239
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AV+Y+K LQKQ++ L E + C C A
Sbjct: 240 LDLAVDYIKDLQKQVKALNESRASCTCPA 268
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 77/89 (86%), Gaps = 2/89 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ DSVPC++RAKRGCATHPRSIAERVRRT+IS+RIRKLQ+LVPNM+KQTNT+DM
Sbjct: 310 IEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDM 369
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AV+Y+K LQ Q++ + + + C CSA
Sbjct: 370 LDLAVDYIKELQMQVKVMNDGRAGCTCSA 398
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 77/89 (86%), Gaps = 2/89 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC++RAKRGCATHPRSIAERVRRT+IS+RIRKLQ+LVPNM+KQTNT+DM
Sbjct: 313 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDM 372
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
L+ AV+Y+K LQ Q++ + + + C CSA
Sbjct: 373 LDLAVDYIKELQMQVKVMNDGRASCTCSA 401
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 70/89 (78%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D +L DSV CR RAKRGCATHPRSIAER RRTRIS R++KLQDLVPNMDKQTNT+DML
Sbjct: 296 DFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDML 355
Query: 224 EEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
+ AV Y+K LQ Q+E+L Q C CS K
Sbjct: 356 DIAVTYIKELQGQVEKLKHDQANCTCSGK 384
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 70/89 (78%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D +L DSV CR RAKRGCATHPRSIAER RRTRIS R++KLQDLVPNMDKQTNT+DML
Sbjct: 296 DFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDML 355
Query: 224 EEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
+ AV Y+K LQ Q+E+L Q C CS K
Sbjct: 356 DIAVTYIKELQGQVEKLKHDQANCTCSGK 384
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 77/97 (79%)
Query: 153 VPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPN 212
+P S + MD DSVPC++RAKRG ATHPRSIAERVRRTRIS+RIRKLQ+LVP
Sbjct: 279 LPRTSSEMFAMDNLLQFSDSVPCKIRAKRGFATHPRSIAERVRRTRISERIRKLQELVPT 338
Query: 213 MDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKC 249
MDKQT+TA+ML+ A++Y+K LQKQ + L++ + +CKC
Sbjct: 339 MDKQTSTAEMLDLALDYIKDLQKQFKTLSDKRAKCKC 375
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 70/89 (78%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D +L DSV CR RAKRGCATHPRSIAER RRTRIS R++KLQDLVPNMDKQTNT+DML
Sbjct: 80 DFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDML 139
Query: 224 EEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
+ AV Y+K LQ Q+E+L Q C CS K
Sbjct: 140 DIAVTYIKELQGQVEKLKHDQANCTCSGK 168
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 70/89 (78%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D +L DSV CR RAKRGCATHPRSIAER RRTRIS R++KLQDLVPNMDKQTNT+DML
Sbjct: 143 DFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDML 202
Query: 224 EEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
+ AV Y+K LQ Q+E+L Q C CS K
Sbjct: 203 DIAVTYIKELQGQVEKLKHDQANCTCSGK 231
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 75/86 (87%)
Query: 163 MDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+ + K L+DSVPC++RA+RGCATHPRS+AERVRRT+IS+ I++L DLVPNMDKQTNTADM
Sbjct: 543 LSLRKELQDSVPCKLRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADM 602
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCK 248
L A+EY+K L+++IE++ E RRCK
Sbjct: 603 LNHAMEYMKQLKEKIEQMKEELRRCK 628
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 71/86 (82%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D +L +DSV CRVRA+RGCATHPRSIAER RRTRIS R++KLQDLVPNMDKQTNT+DML
Sbjct: 139 DYLQLQQDSVACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDML 198
Query: 224 EEAVEYVKFLQKQIEELTEHQRRCKC 249
+ AVEY+K L+ Q+E+L Q C C
Sbjct: 199 DLAVEYIKELKDQVEKLKHDQANCCC 224
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 75/93 (80%)
Query: 146 KVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRK 205
++ +P S + +D +D+VPC++RAKRGCATHPRSIAERVRRT+IS+RIRK
Sbjct: 257 RITHQFSLPKTSSEMASIDKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRK 316
Query: 206 LQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
LQ+LVPNMDKQTNT+DML+ AV+Y+K LQKQ++
Sbjct: 317 LQELVPNMDKQTNTSDMLDLAVDYIKELQKQVK 349
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 75/91 (82%), Gaps = 3/91 (3%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVPNMDKQTNT+DM
Sbjct: 348 IEKYLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDM 407
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
L+ AV+Y+K LQKQ++ + KC D
Sbjct: 408 LDLAVDYIKDLQKQVKR-NRKKAAIKCKILD 437
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 138/273 (50%), Gaps = 57/273 (20%)
Query: 14 GGGGGVG---GRGELSRGG--LARLRSAPASWIDALLEEE--LEDPLKPNQCLTQLLSSG 66
GGGGG+ G E++ G L R RS+PA ++ L E ++ S G
Sbjct: 89 GGGGGLQRSYGLNEIAHGAGSLVRQRSSPAGFLSHLATENGGFSITRGTGGYNSRNGSGG 148
Query: 67 DPVSVTAGLSLS-QSQLDQVGFQRQNSSPADLFDGYFS-NYATPSSYDYVDVS------- 117
P + + LS + Q L Q+ +N + +G S N + S++ Y S
Sbjct: 149 GPSRLKSQLSFTRQDSLSQISEVSEN-----VVEGIGSDNGSQNSTHSYSAASFGMESWD 203
Query: 118 -PNS-------NKRAREDNN----------TQFPSPTAKLNFHSHLKVEQSGQVPGGVSN 159
PNS +K+AR + TQF P L + VE+ Q+P
Sbjct: 204 TPNSIVFSGHPSKQARTGDGDIYSCFNALETQFSLPQTSLEMAT---VEKLLQIP----- 255
Query: 160 LVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNT 219
EDSVPC++RAKRGCATHPRSIAER RRTRIS +++ LQDLVPNMDKQT+
Sbjct: 256 ----------EDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSY 305
Query: 220 ADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
ADMLE AV+++K LQ ++E+L + C C K
Sbjct: 306 ADMLELAVKHIKGLQNEVEKLHKELEGCTCGCK 338
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 131/244 (53%), Gaps = 30/244 (12%)
Query: 28 GGLARLRSAPASWIDALLEEELEDPLKPNQCLTQLLSSGDPVSVTAGLSLSQSQLDQVGF 87
G L R +S+PA ++ L E + P SS P G ++S+ + Q+ F
Sbjct: 142 GSLLRQKSSPAGFLSHHLANENGFSITPGT--GGYNSSNGP---NGGHTVSRLK-SQLSF 195
Query: 88 QRQNS------SPADLFDGYFSN---YATPSSYDYVDVSPNSNKRAREDNNTQFPSPTAK 138
RQ+S D+ +G SN + +P SY S N+ F P +K
Sbjct: 196 TRQDSLSQISEVSEDIVEGINSNTGHHNSPHSYSTTGFGMGS---WDGTNSIVFSGPPSK 252
Query: 139 LN-------FHSHLKVEQSGQVPGGVSNLVDMDMEKLL---EDSVPCRVRAKRGCATHPR 188
F+ +E +P ++L +EKLL EDSVPC++RAKRGCATHPR
Sbjct: 253 RMKNIDGDLFNCLNGLETQFSLP--QTSLEMATVEKLLNIPEDSVPCKIRAKRGCATHPR 310
Query: 189 SIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCK 248
SIAER RRTRIS R++KLQDLVPNMDKQT+ ADML+ AV+++K LQ ++++L + C
Sbjct: 311 SIAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGEVQKLHKELENCT 370
Query: 249 CSAK 252
C K
Sbjct: 371 CGCK 374
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 76/91 (83%), Gaps = 2/91 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
MEK L+ SVPC++RAKRG ATHPRSIAERVRRTRISDRI+KLQ L P DKQT+TADM
Sbjct: 308 MEKFLQVQGSVPCKIRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADM 367
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
L+ AVEY+K LQ+Q++ LT+ + +CKC++ +
Sbjct: 368 LDLAVEYIKDLQEQVQILTDCKDKCKCASHE 398
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 76/91 (83%), Gaps = 2/91 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
MEK L+ SVPC++RAKRG ATHPRSIAERVRRTRISDRI+KLQ L P DKQT+TADM
Sbjct: 305 MEKFLQVQGSVPCKIRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADM 364
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
L+ AVEY+K LQ+Q++ LT+ + +CKC++ +
Sbjct: 365 LDLAVEYIKDLQEQVQILTDCKDKCKCASHE 395
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 71/86 (82%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D +L +DSV CRVRA+RGCATHPRSIAER RRTRIS R++KLQDLVPNMDKQTNT+DML
Sbjct: 267 DYLQLQQDSVACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDML 326
Query: 224 EEAVEYVKFLQKQIEELTEHQRRCKC 249
+ AV+Y+K L+ Q+E+L Q C C
Sbjct: 327 DLAVDYIKELKDQVEKLKHDQANCCC 352
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Query: 159 NLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTN 218
N +D M+ L EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDKQT+
Sbjct: 266 NYMDNFMQ-LPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTS 324
Query: 219 TADMLEEAVEYVKFLQKQIEELTEHQRRCKC 249
+DML+ AV+++K LQ Q++ L + Q C C
Sbjct: 325 YSDMLDLAVQHIKGLQHQLQNLKKDQENCTC 355
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Query: 159 NLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTN 218
N +D M+ L EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDKQT+
Sbjct: 266 NYMDNFMQ-LPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTS 324
Query: 219 TADMLEEAVEYVKFLQKQIEELTEHQRRCKC 249
+DML+ AV+++K LQ Q++ L + Q C C
Sbjct: 325 YSDMLDLAVQHIKGLQHQLQNLKKDQENCTC 355
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Query: 150 SGQVPGGVSNLVDMD-MEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQD 208
SG + G + MD +L +D VP +VRAKRGCATHPRSIAER RRTRIS+++RKLQD
Sbjct: 234 SGAMAGTALEMAGMDRYMQLQQDQVPFKVRAKRGCATHPRSIAERERRTRISEKLRKLQD 293
Query: 209 LVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
LVPNMDKQT+TADML+ AVE++K LQ +++ L Q +C C K
Sbjct: 294 LVPNMDKQTSTADMLDLAVEHIKGLQSELQALKHEQEKCTCCRK 337
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
Query: 165 MEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
+EKLL EDSVPC+VRAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDKQT+ AD
Sbjct: 317 VEKLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYAD 376
Query: 222 MLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
ML+ AV+++K LQ ++++L + C C K
Sbjct: 377 MLDLAVQHIKGLQNEVQKLNKELENCTCGCK 407
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
Query: 165 MEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
+EKLL EDSVPC+VRAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDKQT+ AD
Sbjct: 264 VEKLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYAD 323
Query: 222 MLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
ML+ AV+++K LQ ++++L + C C K
Sbjct: 324 MLDLAVQHIKGLQNEVQKLNKELENCTCGCK 354
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Query: 159 NLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTN 218
N +D M+ L EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDKQT+
Sbjct: 257 NYMDNYMQ-LPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTS 315
Query: 219 TADMLEEAVEYVKFLQKQIEELTEHQRRCKC 249
+DML+ AV+++K LQ Q++ L + Q C C
Sbjct: 316 YSDMLDLAVQHIKGLQHQLQNLKKEQENCTC 346
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 76/92 (82%), Gaps = 3/92 (3%)
Query: 165 MEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
+E+LL EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +D
Sbjct: 277 VERLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSD 336
Query: 222 MLEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
ML+ AV+++K LQ QI++L + C C +K+
Sbjct: 337 MLDLAVQHIKGLQNQIQKLNKEVENCTCGSKE 368
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 71/86 (82%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D ++ +DSV CRVRAKRGCATHPRSIAER RRTRIS R++KLQDLVPNMDKQTNT+DML
Sbjct: 268 DYLQMQQDSVACRVRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDML 327
Query: 224 EEAVEYVKFLQKQIEELTEHQRRCKC 249
+ AV+Y+K L+ ++E+L Q C C
Sbjct: 328 DLAVDYIKELKDRVEKLKHDQANCCC 353
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 73/92 (79%)
Query: 161 VDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTA 220
+D M + +DSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDKQT+ +
Sbjct: 249 MDQLMHNIPQDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYS 308
Query: 221 DMLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
DML+ AV+++K LQ Q+++L E C C K
Sbjct: 309 DMLDLAVQHIKGLQTQVQKLHEDLENCTCGCK 340
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Query: 159 NLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTN 218
N +D M+ L EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDKQT+
Sbjct: 261 NYMDNFMQ-LPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTS 319
Query: 219 TADMLEEAVEYVKFLQKQIEELTEHQRRCKC 249
+DML+ AV+++K LQ Q++ L + Q C C
Sbjct: 320 YSDMLDLAVQHIKGLQHQLQNLKKDQENCTC 350
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
Query: 165 MEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
++KLL EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDKQT+ AD
Sbjct: 193 VDKLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYAD 252
Query: 222 MLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
ML+ AV+++K LQ Q+++L + C C K
Sbjct: 253 MLDLAVQHIKGLQTQVQKLHKEMENCTCGCK 283
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 76/88 (86%), Gaps = 2/88 (2%)
Query: 165 MEKLL--EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L ++ VP ++RAKRGCATHPRSIAER+RRTRIS+RI+KLQ+L P+MDKQT+TADM
Sbjct: 328 VEKFLRFQEPVPHQIRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADM 387
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCS 250
LE AVEY+K LQ+Q++ LT+ + +C CS
Sbjct: 388 LELAVEYIKGLQRQVKTLTDTKAKCTCS 415
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 76/99 (76%)
Query: 153 VPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPN 212
+PG S + M+ ++ SVPC++RAKRG ATHPRSIAER RRTRIS RI+KLQDL P
Sbjct: 332 LPGSSSRVATMEKFYQIQGSVPCKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPK 391
Query: 213 MDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
DKQT+TADML+ AVEY+K LQKQ++ L + + +C C++
Sbjct: 392 TDKQTSTADMLDLAVEYIKDLQKQVKMLRDTRAKCTCTS 430
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 76/99 (76%)
Query: 153 VPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPN 212
+PG S + M+ ++ SVPC++RAKRG ATHPRSIAER RRTRIS RI+KLQDL P
Sbjct: 336 LPGSSSRMATMEKLYQIQGSVPCKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPK 395
Query: 213 MDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
DKQT+TADML+ AVEY+K LQKQ++ L + + +C C++
Sbjct: 396 SDKQTSTADMLDLAVEYIKDLQKQVKILRDTRAKCTCTS 434
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
Query: 165 MEKLLE---DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
+EK L+ D VP RVRAKRGCATHPRSIAER RRTRIS+++RKLQ LVPNMDKQT+T+D
Sbjct: 270 VEKYLQMQHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSD 329
Query: 222 MLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
ML+ AV+++K LQ Q++ L E + +C CS K
Sbjct: 330 MLDLAVDHIKGLQSQLQTLKEDKEKCTCSCK 360
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 71/80 (88%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
+VP R RAKRGCATHPRSIAERVRRT+IS+R++KLQDLVP+MDKQTNT+DML+E VEYVK
Sbjct: 378 TVPMRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVK 437
Query: 232 FLQKQIEELTEHQRRCKCSA 251
LQ+Q++EL++ R + +A
Sbjct: 438 SLQRQVQELSDTVVRLEAAA 457
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%), Gaps = 3/90 (3%)
Query: 165 MEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
ME L+ EDSVPCR RAKRG ATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ AD
Sbjct: 216 MENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYAD 275
Query: 222 MLEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
ML+ AVE++K LQ Q+E L + RC C A
Sbjct: 276 MLDLAVEHIKGLQHQVESLEKGMERCTCGA 305
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
Query: 165 MEKLLE---DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
+EK L+ D VP RVRAKRGCATHPRSIAER RRTRIS+++RKLQ LVPNMDKQT+T+D
Sbjct: 119 VEKYLQMQHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSD 178
Query: 222 MLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
ML+ AV+++K LQ Q++ L E + +C CS K
Sbjct: 179 MLDLAVDHIKGLQSQLQTLKEDKEKCTCSCK 209
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 79/104 (75%), Gaps = 6/104 (5%)
Query: 155 GGVSNLVDMDME------KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQD 208
GG+++ ++M +L D VP +VRAKRGCATHPRSIAER RRTRIS+++RKLQ+
Sbjct: 113 GGMASTSALEMAGMDRYLQLQHDQVPFKVRAKRGCATHPRSIAERERRTRISEKLRKLQE 172
Query: 209 LVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
LVPNMDKQT+TADML+ AVE++K LQ Q++ L Q +C C ++
Sbjct: 173 LVPNMDKQTSTADMLDLAVEHIKGLQSQLQALKHEQEKCTCCSR 216
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 89/126 (70%), Gaps = 5/126 (3%)
Query: 128 NNTQFPSPTAKLNFHSH----LKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGC 183
N+ F +PT+K H++ + S ++ GV+ + ++ +D VP RVRAKRGC
Sbjct: 94 NSIVFSNPTSKAGIHNNDDIIASISNSYELQFGVAKET-AGLLQMQQDQVPFRVRAKRGC 152
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEH 243
ATHPRSIAER RRTRIS+++RKLQ LVPNMDKQT+TADML+ AV++++ LQ +++ L E
Sbjct: 153 ATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQSELQALKED 212
Query: 244 QRRCKC 249
+ +C C
Sbjct: 213 KEKCTC 218
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 73/87 (83%), Gaps = 4/87 (4%)
Query: 169 LED----SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLE 224
LED +VP R RAKRGCATHPRSIAERVRRT+IS+R+++LQDLVPNMDKQTNT+DML+
Sbjct: 20 LEDNHYGAVPMRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLD 79
Query: 225 EAVEYVKFLQKQIEELTEHQRRCKCSA 251
E VEYVK LQ++++EL++ R K A
Sbjct: 80 ETVEYVKSLQRKVQELSDTVARLKADA 106
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 77/91 (84%), Gaps = 2/91 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EK L+ SVPC++RAKRG ATHPRSIAERVRRTRIS+RI+KLQDL P +KQT+TADM
Sbjct: 352 IEKFLQIQGSVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADM 411
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
L+ AVEY+K LQ++++ L++ + +CKC++ +
Sbjct: 412 LDLAVEYIKDLQQKVKILSDCKAKCKCTSNE 442
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 73/90 (81%)
Query: 163 MDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
M + LL+ PC+ RA+RG ATHPRSIAER RR+RIS+R++KLQDLVPNMDKQTNTADM
Sbjct: 1 MGYDDLLDLYSPCKTRARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADM 60
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+EAVEYVK LQ Q+++L+E R K S +
Sbjct: 61 LDEAVEYVKHLQTQVKDLSETIVRLKNSIR 90
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 74/90 (82%), Gaps = 3/90 (3%)
Query: 166 EKLLE---DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
EK L+ + VPC++RAKRG ATHPRSIAERVRRTRIS+R+RKLQ+L P+MDKQT+TAD
Sbjct: 322 EKFLDFQGNFVPCKIRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADK 381
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ ++E +K LQKQ++ L + + +C CS+K
Sbjct: 382 LDLSIELIKDLQKQVKSLADTKAKCTCSSK 411
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 76/90 (84%), Gaps = 2/90 (2%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+EKLL+ DSVP +RAKRG ATHPRS+AERVRRTRIS+R+RKLQ++VPN+DKQT T++M
Sbjct: 229 VEKLLQFPDSVPSSIRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEM 288
Query: 223 LEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
L+ AVEY+K LQKQ++ ++ + +C+C K
Sbjct: 289 LDLAVEYIKDLQKQLKTMSAKRAKCRCRNK 318
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 71/86 (82%)
Query: 167 KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
+L D VP +VRAKRGCATHPRSIAER RRTRIS+++RKLQ+LVPNMDKQT+TADML+ A
Sbjct: 17 QLQHDQVPFKVRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLA 76
Query: 227 VEYVKFLQKQIEELTEHQRRCKCSAK 252
VE++K LQ Q++ L Q +C C ++
Sbjct: 77 VEHIKGLQSQLQALKHEQEKCTCCSR 102
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 76/99 (76%), Gaps = 3/99 (3%)
Query: 157 VSNLVDMDMEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNM 213
V NL +EKLL EDSVPC++RAKRG ATHPRSIAER RRTRIS +++KLQDLVPNM
Sbjct: 54 VLNLEIETVEKLLHVPEDSVPCKIRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNM 113
Query: 214 DKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
DKQT+ ADML+ AV+++K LQ ++E+L + C C +
Sbjct: 114 DKQTSYADMLDFAVQHIKGLQNEVEKLHKEMENCTCGCE 152
>gi|302767438|ref|XP_002967139.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
gi|300165130|gb|EFJ31738.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
Length = 110
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 71/80 (88%)
Query: 163 MDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADM 222
+ + K L+DSVPC++RA+RGCATHPRS+AERVRRT+IS+ I++L DLVPNMDKQTNTADM
Sbjct: 30 LSLRKELQDSVPCKLRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADM 89
Query: 223 LEEAVEYVKFLQKQIEELTE 242
L A+EY+K L+++IE++ E
Sbjct: 90 LNHAMEYMKQLKEKIEQMKE 109
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 71/82 (86%)
Query: 169 LEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVE 228
++ SVPC++RAKRG ATHPRS+AERVRRTRIS++I+KL+ L P DKQT+TADML+ AVE
Sbjct: 159 IQGSVPCKIRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVE 218
Query: 229 YVKFLQKQIEELTEHQRRCKCS 250
Y+K LQ+Q++ LT+ + +CKC+
Sbjct: 219 YIKDLQEQVKTLTDCREKCKCT 240
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 67/80 (83%)
Query: 173 VPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKF 232
V +VRAKRGCATHPRSIAER RRTRIS+++RKLQDLVPNMDKQT+T+DML+ AVE++K
Sbjct: 237 VAFKVRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKG 296
Query: 233 LQKQIEELTEHQRRCKCSAK 252
LQ Q++ + Q +C C +K
Sbjct: 297 LQSQLQAMKHEQDKCTCCSK 316
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 69/79 (87%), Gaps = 3/79 (3%)
Query: 165 MEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
+E+LL EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +D
Sbjct: 277 VERLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSD 336
Query: 222 MLEEAVEYVKFLQKQIEEL 240
ML+ AV+++K LQ QI+ L
Sbjct: 337 MLDLAVQHIKGLQNQIQVL 355
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 70/83 (84%)
Query: 167 KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
++ +D VP RVRAKRGCATHPRSIAER RRTRIS+++RKLQ LVPNMDKQT+TADML+ A
Sbjct: 133 QMQQDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLA 192
Query: 227 VEYVKFLQKQIEELTEHQRRCKC 249
V++++ LQ +++ L + + +C C
Sbjct: 193 VDHIRGLQNELQALKKDKEKCSC 215
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 62/67 (92%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RAKRGCATHPRSIAERVRRTRIS+R++KLQDLVPNM+K TNT+DML+E VEYVK LQ
Sbjct: 2 RARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQM 61
Query: 236 QIEELTE 242
+++ELTE
Sbjct: 62 KVKELTE 68
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 65/77 (84%), Gaps = 3/77 (3%)
Query: 165 MEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
ME L+ EDSVPCR RAKRG ATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ AD
Sbjct: 216 MENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYAD 275
Query: 222 MLEEAVEYVKFLQKQIE 238
ML+ AVE++K LQ Q+E
Sbjct: 276 MLDLAVEHIKGLQHQVE 292
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 65/77 (84%), Gaps = 3/77 (3%)
Query: 165 MEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
ME L+ EDSVPCR RAKRG ATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ AD
Sbjct: 218 MENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYAD 277
Query: 222 MLEEAVEYVKFLQKQIE 238
ML+ AVE++K LQ Q+E
Sbjct: 278 MLDLAVEHIKGLQHQVE 294
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 76/98 (77%)
Query: 153 VPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPN 212
+P + + ++M ++ SVP ++RAKRG ATHPRSIAER RRTRIS+RI+KLQDL P
Sbjct: 337 LPSSSTKMSSIEMFLQIQGSVPYKIRAKRGFATHPRSIAERERRTRISERIKKLQDLFPR 396
Query: 213 MDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCS 250
+K T+TADML+ AVE++K LQ+Q++ L++ + +CKC+
Sbjct: 397 SEKPTSTADMLDLAVEHIKDLQQQVQILSDRKAKCKCT 434
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 61/70 (87%)
Query: 173 VPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKF 232
V R RAKRGCATHPRSIAERVRRTRIS+R++KLQDLVPNM+K TNTADML+E VEYVK
Sbjct: 1 VQMRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKS 60
Query: 233 LQKQIEELTE 242
LQ ++ EL E
Sbjct: 61 LQVKVSELQE 70
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 65/77 (84%), Gaps = 3/77 (3%)
Query: 165 MEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
ME L+ EDSVPC+ RAKRG ATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ AD
Sbjct: 218 MENLMNIPEDSVPCKARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYAD 277
Query: 222 MLEEAVEYVKFLQKQIE 238
ML+ AVE++K LQ Q+E
Sbjct: 278 MLDLAVEHIKGLQHQVE 294
>gi|356572064|ref|XP_003554190.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 383
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 78/97 (80%)
Query: 153 VPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPN 212
+P S++ MD DSVPC++RAKRG ATHPRSIAERVRR+RIS+RIRKLQ+LVPN
Sbjct: 275 LPRTSSDMFAMDSLLQFSDSVPCKIRAKRGFATHPRSIAERVRRSRISERIRKLQELVPN 334
Query: 213 MDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKC 249
MDKQT+TA+ML+ AV+Y+K LQK+ + L + + +CKC
Sbjct: 335 MDKQTSTAEMLDLAVDYIKDLQKEFKTLNDKRAKCKC 371
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 72/84 (85%), Gaps = 3/84 (3%)
Query: 162 DMDMEKLLED--SVPCR-VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTN 218
++D + L D +VP + +RA RG ATHPRSIAERVRR +IS+R++KLQDLVP+MD+QTN
Sbjct: 45 NVDFDDLFADPSAVPLKTIRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTN 104
Query: 219 TADMLEEAVEYVKFLQKQIEELTE 242
TADML++AVEYVK LQ+Q++EL++
Sbjct: 105 TADMLDDAVEYVKQLQQQVQELSK 128
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 59/65 (90%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
+RA RG ATHPRSIAERVRR +IS+R++KLQ+LVPN D+QTNTADML++AVEYVK LQ Q
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 237 IEELT 241
++ELT
Sbjct: 439 VQELT 443
>gi|359478406|ref|XP_002282999.2| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 411
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 50/53 (94%), Gaps = 2/53 (3%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
+EK L+ DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+LVPNMDK
Sbjct: 346 IEKYLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDK 398
>gi|223950383|gb|ACN29275.1| unknown [Zea mays]
gi|414869404|tpg|DAA47961.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414869405|tpg|DAA47962.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 347
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 52/58 (89%), Gaps = 2/58 (3%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTA 220
+EK L+ D+VPC+VRAKRGCATHPRSIAERVRRT+IS+RIRKLQ+LVP+MDK T A
Sbjct: 283 IEKFLQFQDAVPCKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKVTAPA 340
>gi|357454361|ref|XP_003597461.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486509|gb|AES67712.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 411
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%), Gaps = 2/53 (3%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
MEK L DSVP ++RAKRGCATHPRSIAERVRRT+IS+R+RKLQDLVPNMDK
Sbjct: 318 MEKFLHFSDSVPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDK 370
>gi|6850309|gb|AAF29386.1|AC009999_6 Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269. EST gb|AI996380 comes from this
gene [Arabidopsis thaliana]
Length = 323
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Query: 159 NLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
N +D M+ L EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDK
Sbjct: 266 NYMDNFMQ-LPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDK 321
>gi|413937661|gb|AFW72212.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 150 SGQVPGGVSNLVDMD-MEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQD 208
SG + G + MD +L +D VP +VRAKRGCATHPRSIAER RRTRIS+++RKLQD
Sbjct: 221 SGAMAGTALEMAGMDRYVQLQQDQVPFKVRAKRGCATHPRSIAERERRTRISEKLRKLQD 280
Query: 209 LVPNMDK 215
LVPNMDK
Sbjct: 281 LVPNMDK 287
>gi|414879182|tpg|DAA56313.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 323
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 46/52 (88%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
D +L +DSV CRVRA+RGCATHPRSIAER RRTRIS R++KLQDLVPNMDK
Sbjct: 270 DYLQLQQDSVACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDK 321
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG ATHP SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 259 RVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 317
Query: 236 QIEELT 241
Q++ L+
Sbjct: 318 QVKVLS 323
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR +ISDR++ LQ+LVPN +K TN A ML+E ++YVKFLQ
Sbjct: 313 RVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQL 371
Query: 236 QIEELT 241
Q++ L+
Sbjct: 372 QVKVLS 377
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR +ISDR++ LQ+LVPN +K TN A ML+E ++YVKFLQ
Sbjct: 313 RVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQL 371
Query: 236 QIEELT 241
Q++ L+
Sbjct: 372 QVKVLS 377
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR +ISDR++ LQ+LVPN ++ T+ A ML+E +EYVKFLQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 236 QIEELT 241
Q++ L+
Sbjct: 356 QVKVLS 361
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 173 VPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKF 232
V RVRA+RG AT P SIAER+RR +ISDR++ LQDLVPN +K + A ML+E ++YVKF
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNK-ADKASMLDEIIDYVKF 374
Query: 233 LQKQIEELT 241
LQ Q++ L+
Sbjct: 375 LQLQVKVLS 383
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 173 VPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKF 232
V RVRA+RG AT P SIAER+RR +ISDR++ LQDLVPN +K + A ML+E ++YVKF
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKF 374
Query: 233 LQKQIEELT 241
LQ Q++ L+
Sbjct: 375 LQLQVKVLS 383
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 173 VPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKF 232
V RVRA+RG AT P SIAER+RR +ISDR++ LQDLVPN +K + A ML+E ++YVKF
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKF 374
Query: 233 LQKQIEELT 241
LQ Q++ L+
Sbjct: 375 LQLQVKVLS 383
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR +ISDR++ LQDLVPN +K + A ML+E ++YVKFLQ
Sbjct: 316 RVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQL 374
Query: 236 QIEELT 241
Q++ L+
Sbjct: 375 QVKVLS 380
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
RVRA+RG AT P SIAER+RR +ISDR++ LQ+LVPN +K T+ A MLEE +EY+KFLQ
Sbjct: 280 ARVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNK-TDKASMLEEIIEYIKFLQ 338
Query: 235 KQIEELT 241
Q + L+
Sbjct: 339 LQTKVLS 345
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR +ISDR++ LQDLVPN +K + A ML+E ++YVKFLQ
Sbjct: 281 RVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQL 339
Query: 236 QIEELT 241
Q++ L+
Sbjct: 340 QVKVLS 345
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 181 TRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQ 239
Query: 235 KQIEELT 241
Q++ L+
Sbjct: 240 LQVKVLS 246
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E V+YVKFLQ
Sbjct: 239 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDYVKFLQL 297
Query: 236 QIEELT 241
Q++ L+
Sbjct: 298 QVKVLS 303
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E V+YVKFLQ
Sbjct: 238 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDYVKFLQL 296
Query: 236 QIEELT 241
Q++ L+
Sbjct: 297 QVKVLS 302
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 252 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 310
Query: 236 QIEELT 241
Q++ L+
Sbjct: 311 QVKVLS 316
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQDLVPN +K T+ A ML+E V+YVKFLQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANK-TDKASMLDEIVDYVKFLQL 61
Query: 236 QIEELT 241
Q++ L+
Sbjct: 62 QVKVLS 67
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 246 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 304
Query: 236 QIEELT 241
Q++ L+
Sbjct: 305 QVKVLS 310
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 103 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 161
Query: 236 QIEELT 241
Q++ L+
Sbjct: 162 QVKVLS 167
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 224 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 282
Query: 236 QIEELT 241
Q++ L+
Sbjct: 283 QVKVLS 288
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E +EYV+FLQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 236 QIEELT 241
Q++ L+
Sbjct: 157 QVKVLS 162
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 36 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 94
Query: 236 QIEELT 241
Q++ L+
Sbjct: 95 QVKVLS 100
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E +EYV+FLQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 236 QIEELT 241
Q++ L+
Sbjct: 157 QVKVLS 162
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 255 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 313
Query: 236 QIEELT 241
Q++ L+
Sbjct: 314 QVKVLS 319
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 216 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 274
Query: 236 QIEELT 241
Q++ L+
Sbjct: 275 QVKVLS 280
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 88
Query: 236 QIEELT 241
Q++ L+
Sbjct: 89 QVKVLS 94
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%), Gaps = 2/65 (3%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK--QTNTADMLEEAVEYVKFL 233
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K QT+ A ML+E ++YVKFL
Sbjct: 237 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFL 296
Query: 234 QKQIE 238
Q Q++
Sbjct: 297 QLQVK 301
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 203 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQL 261
Query: 236 QIEELT 241
Q++ L+
Sbjct: 262 QVKVLS 267
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 203 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQL 261
Query: 236 QIEELT 241
Q++ L+
Sbjct: 262 QVKVLS 267
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR +I++R++ LQ+LVPN +K T+ A ML+E +EYVKFLQ
Sbjct: 295 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQL 353
Query: 236 QIEELT 241
Q++ L+
Sbjct: 354 QVKVLS 359
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 89
Query: 236 QIEELT 241
Q++ L+
Sbjct: 90 QVKVLS 95
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
Query: 152 QVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVP 211
Q PGG S V K +VRA+RG AT P SIAER+RR RI++R++ LQ+LVP
Sbjct: 186 QTPGGGSAGVSQSQPKQ-------KVRARRGQATDPHSIAERLRRERIAERMKALQELVP 238
Query: 212 NMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
N +K T+ A ML+E ++YVKFLQ Q++ L+
Sbjct: 239 NANK-TDKASMLDEIIDYVKFLQLQVKVLS 267
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK--QTNTADMLEEAVEYVKFL 233
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K QT+ A ML+E ++YVKFL
Sbjct: 249 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFL 308
Query: 234 QKQIEELT 241
Q Q++ T
Sbjct: 309 QLQVKAST 316
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 173 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 231
Query: 236 QIEELT 241
Q++ L+
Sbjct: 232 QVKVLS 237
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 196 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 254
Query: 236 QIEELT 241
Q++ L+
Sbjct: 255 QVKVLS 260
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR +ISDR++ LQ+LVPN ++ T+ A ML+E +EYVKFLQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 236 QIE 238
Q++
Sbjct: 356 QVK 358
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR +I++R++ LQ+LVPN +K T+ A ML+E +EYVKFLQ
Sbjct: 148 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQL 206
Query: 236 QIEELT 241
Q++ L+
Sbjct: 207 QVKVLS 212
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 173 VPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKF 232
V RVRA+RG AT P SIAER+RR +ISDR++ LQDLVPN +K + A ML+E +++VKF
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDHVKF 374
Query: 233 LQKQIEELT 241
LQ Q++ L+
Sbjct: 375 LQLQVKVLS 383
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 195 KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQV 253
Query: 236 QIEELT 241
Q++ L+
Sbjct: 254 QVKVLS 259
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 198 KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQV 256
Query: 236 QIEELT 241
Q++ L+
Sbjct: 257 QVKVLS 262
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR +I++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 135 RVRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 193
Query: 236 QIEELT 241
Q++ L+
Sbjct: 194 QVKVLS 199
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RAKRG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 194 RQRAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 252
Query: 236 QIEELT 241
Q++ L+
Sbjct: 253 QVKVLS 258
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+VRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 136 TKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQ 194
Query: 235 KQIEELT 241
Q++ L+
Sbjct: 195 LQVKVLS 201
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RAKRG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 187 RQRAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 245
Query: 236 QIEELT 241
Q++ L+
Sbjct: 246 QVKVLS 251
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RA+RG AT P SIAER+RR +IS+R++ LQDLVPN +K + A ML+E ++YVKFLQ
Sbjct: 314 RTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQL 372
Query: 236 QIEELT 241
Q++ L+
Sbjct: 373 QVKVLS 378
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
++RA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 136 TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQ 194
Query: 235 KQIEELT 241
Q++ L+
Sbjct: 195 LQVKVLS 201
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
++RA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 136 TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQ 194
Query: 235 KQIEELT 241
Q++ L+
Sbjct: 195 LQVKVLS 201
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVP+ +K T+ A ML+E ++YVKFLQ
Sbjct: 143 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQV 201
Query: 236 QIEELT 241
Q++ L+
Sbjct: 202 QVKVLS 207
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR +I++R++ LQ+LVPN +K + A ML+E +EYVKFLQ
Sbjct: 239 RVRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNK-VDKASMLDEIIEYVKFLQL 297
Query: 236 QIEELT 241
Q++ L+
Sbjct: 298 QVKVLS 303
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 158 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 216
Query: 236 QIEELT 241
Q++ T
Sbjct: 217 QVKAST 222
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 236 QIEELT 241
Q++ L+
Sbjct: 188 QVKVLS 193
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 186 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 244
Query: 236 QIEELT 241
Q++ L+
Sbjct: 245 QVKVLS 250
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 236 QIEELT 241
Q++ L+
Sbjct: 188 QVKVLS 193
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 249 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 307
Query: 236 QIEELT 241
Q+ ++
Sbjct: 308 QVLSMS 313
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RAKRG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YV+FLQ
Sbjct: 193 RQRAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVRFLQL 251
Query: 236 QIEELT 241
Q++ L+
Sbjct: 252 QVKVLS 257
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 127 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 185
Query: 236 QIEELT 241
Q++ L+
Sbjct: 186 QVKVLS 191
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E + YVKFLQ
Sbjct: 29 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIGYVKFLQL 87
Query: 236 QIEELT 241
Q++ L+
Sbjct: 88 QVKVLS 93
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R+R LQDLVPN +K T+ A ML+E ++YVKFL+
Sbjct: 180 KVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRL 238
Query: 236 QIEELT 241
Q++ L+
Sbjct: 239 QVKVLS 244
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RA+RG AT P SIAER+RR +IS+R++ LQDLVPN +K + + ML+E ++YVKFLQ
Sbjct: 319 RARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKSSMLDEIIDYVKFLQL 377
Query: 236 QIEELT 241
Q++ L+
Sbjct: 378 QVKVLS 383
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R+R LQDLVPN +K T+ A ML+E ++YVKFL+
Sbjct: 131 KVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRL 189
Query: 236 QIEELT 241
Q++ L+
Sbjct: 190 QVKVLS 195
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RA+RG AT P SIAER+RR +IS+R++ LQDLVPN +K + + ML+E ++YVKFLQ
Sbjct: 318 RARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKSSMLDEIIDYVKFLQL 376
Query: 236 QIEEL 240
Q++ L
Sbjct: 377 QVKVL 381
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR +I++R++ LQ+LVPN K + A ML+E +EYVKFLQ
Sbjct: 350 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSK-VDKASMLDEIIEYVKFLQL 408
Query: 236 QIEELT 241
Q++ L+
Sbjct: 409 QVKVLS 414
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
++RA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YV+FLQ
Sbjct: 136 TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVEFLQ 194
Query: 235 KQIEELT 241
Q++ L+
Sbjct: 195 LQVKVLS 201
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 167 KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
K LE + VRA+RG AT SIAERVRR +IS+R++ LQDLVP DK T A ML+E
Sbjct: 162 KELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEI 221
Query: 227 VEYVKFLQKQIEELT 241
+ YV+ LQ+QIE L+
Sbjct: 222 INYVQSLQRQIEFLS 236
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 167 KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
K LE + VRA+RG AT SIAERVRR +IS+R++ LQDLVP DK T A ML+E
Sbjct: 162 KELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEI 221
Query: 227 VEYVKFLQKQIEELT 241
+ YV+ LQ+QIE L+
Sbjct: 222 INYVQSLQRQIEFLS 236
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 167 KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
K LE + VRA+RG AT SIAERVRR +IS+R++ LQDLVP DK T A ML+E
Sbjct: 162 KELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEI 221
Query: 227 VEYVKFLQKQIEELT 241
+ YV+ LQ+QIE L+
Sbjct: 222 INYVQSLQRQIEFLS 236
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 167 KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
K LE + VRA+RG AT SIAERVRR +IS+R++ LQDLVP DK T A ML+E
Sbjct: 159 KELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEI 218
Query: 227 VEYVKFLQKQIEELT 241
+ YV+ LQ+QIE L+
Sbjct: 219 INYVQSLQRQIEFLS 233
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 167 KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
K LE + VRA+RG AT SIAERVRR +IS+R++ LQDLVP DK T A ML+E
Sbjct: 162 KELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEI 221
Query: 227 VEYVKFLQKQIEELT 241
+ YV+ LQ+QIE L+
Sbjct: 222 INYVQSLQRQIEFLS 236
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R+R LQ+LVPN +K T+ A ML+E ++YVKFL+
Sbjct: 115 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 173
Query: 236 QIEELT 241
Q++ L+
Sbjct: 174 QVKVLS 179
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R+R LQ+LVPN +K T+ A ML+E ++YVKFL+
Sbjct: 123 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 181
Query: 236 QIEELT 241
Q++ L+
Sbjct: 182 QVKVLS 187
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVP+++K T+ A ML+E V+YVKFL+
Sbjct: 168 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRL 226
Query: 236 QIEELT 241
Q++ L+
Sbjct: 227 QVKVLS 232
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ RVRA+RG AT P SIAER+RR RIS+RI+ LQ+LVP+ +K T+ A ML+E ++YVK
Sbjct: 137 SIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVK 195
Query: 232 FLQKQIEELT 241
FL+ Q++ L+
Sbjct: 196 FLRLQVKVLS 205
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ RVRA+RG AT P SIAER+RR RIS+RI+ LQ+LVP+ +K T+ A ML+E ++YVK
Sbjct: 136 SIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVK 194
Query: 232 FLQKQIEELT 241
FL+ Q++ L+
Sbjct: 195 FLRLQVKVLS 204
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP DK T A ML+E + YV+ LQKQ
Sbjct: 161 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQ 220
Query: 237 IEELT 241
+E L+
Sbjct: 221 VEFLS 225
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 75/132 (56%), Gaps = 16/132 (12%)
Query: 114 VDVSPNSNKRA-REDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDS 172
+D SP KR RE++ TA LN + +++G+ GG + D +E+
Sbjct: 52 LDTSPQDKKRKPREED-------TASLNSAHSKEAKENGRKRGGKKHSRDQ-----MEEE 99
Query: 173 VP---CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
P VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + Y
Sbjct: 100 APQGFIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINY 159
Query: 230 VKFLQKQIEELT 241
V+ LQ Q+E L+
Sbjct: 160 VQSLQNQVEFLS 171
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R+R LQ+LVPN +K T+ A ML+E ++YVKFL+
Sbjct: 114 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 172
Query: 236 QIEELT 241
Q++ L+
Sbjct: 173 QVKVLS 178
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 5/66 (7%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQ-----TNTADMLEEAVEYV 230
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YV
Sbjct: 284 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYV 343
Query: 231 KFLQKQ 236
KFLQ Q
Sbjct: 344 KFLQLQ 349
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVP+++K T+ A ML+E V+YVKFL+
Sbjct: 165 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRL 223
Query: 236 QIEELT 241
Q++ L+
Sbjct: 224 QVKVLS 229
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R+R LQ+LVPN +K T+ A ML+E ++YVKFL+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 190
Query: 236 QIEELT 241
Q++ L+
Sbjct: 191 QVKVLS 196
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R+R LQ+LVPN +K T+ A ML+E ++YVKFL+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 190
Query: 236 QIEELT 241
Q++ L+
Sbjct: 191 QVKVLS 196
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVP +K T+ A ML+E V+YVKFL+
Sbjct: 15 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 73
Query: 236 QIEELT 241
QI+ L+
Sbjct: 74 QIKVLS 79
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R+R LQ+LVPN +K T+ A ML+E ++YVKFL+
Sbjct: 121 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAVMLDEILDYVKFLRL 179
Query: 236 QIEELT 241
Q++ L+
Sbjct: 180 QVKVLS 185
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R+R LQ+LVPN +K T+ A ML+E ++YVKFL+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 190
Query: 236 QIEELT 241
Q++ L+
Sbjct: 191 QVKVLS 196
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R+R LQ+LVPN +K T+ A ML+E ++YVKFL+
Sbjct: 23 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 81
Query: 236 QIEELT 241
Q++ L+
Sbjct: 82 QVKVLS 87
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R+R LQ+LVP+++K ++ A ML+E V+YVKFL+
Sbjct: 179 RVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINK-SDRAAMLDEIVDYVKFLRL 237
Query: 236 QIEELT 241
Q++ L+
Sbjct: 238 QVKVLS 243
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RA+RG AT P SIAER+RR +IS+R++ LQ LVPN +K + A ML+E ++YVKFLQ
Sbjct: 315 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQL 373
Query: 236 QIEELT 241
Q++ L+
Sbjct: 374 QVKVLS 379
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RA+RG AT P SIAER+RR +IS+R++ LQ LVPN +K + A ML+E ++YVKFLQ
Sbjct: 315 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQL 373
Query: 236 QIEELT 241
Q++ L+
Sbjct: 374 QVKVLS 379
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP DK T A ML+E + YV+ LQKQ
Sbjct: 150 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQ 209
Query: 237 IEELT 241
+E L+
Sbjct: 210 VEFLS 214
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVP+ +K T+ A ML+E V+YVKFL+
Sbjct: 168 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDYVKFLRL 226
Query: 236 QIEELT 241
Q++ L+
Sbjct: 227 QVKVLS 232
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RA+RG AT P SIAER+RR +IS+R++ LQ LVPN +K + A ML+E ++YVKFLQ
Sbjct: 315 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQL 373
Query: 236 QIEELT 241
Q++ L+
Sbjct: 374 QVKVLS 379
>gi|115447169|ref|NP_001047364.1| Os02g0603600 [Oryza sativa Japonica Group]
gi|113536895|dbj|BAF09278.1| Os02g0603600, partial [Oryza sativa Japonica Group]
Length = 60
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 48/58 (82%)
Query: 195 RRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAK 252
RRTRIS+++RKLQ+LVPNMDKQT+TADML+ AVE++K LQ Q++ L Q +C C ++
Sbjct: 2 RRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQLQALKHEQEKCTCCSR 59
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LV N +K T+ A ML+E ++YVKFLQ
Sbjct: 144 RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDYVKFLQL 202
Query: 236 QIEELT 241
Q+ ++
Sbjct: 203 QVLSMS 208
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVP +K T+ A ML+E V+YVKFL+
Sbjct: 19 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 77
Query: 236 QIEELT 241
Q++ L+
Sbjct: 78 QVKVLS 83
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AERVRR +IS+R+R LQ+LVP DK+T A ML+E + YV+ LQ+
Sbjct: 230 HVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQ 289
Query: 236 QIEELT 241
Q+E L+
Sbjct: 290 QVEFLS 295
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RA RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 238 RERAWRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 296
Query: 236 QIEELT 241
Q+ ++
Sbjct: 297 QVLSMS 302
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RA+RG AT P SIAER+RR +IS+R++ LQ LVPN +K + A ML+E ++YVKFLQ
Sbjct: 238 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQL 296
Query: 236 QIEELT 241
Q++ L+
Sbjct: 297 QVKVLS 302
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RIS+RI+ LQ+LVPN +K T+ A +++E ++YVKFL+
Sbjct: 133 RVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNK-TDRAALVDEILDYVKFLRL 191
Query: 236 QIEELT 241
Q++ L+
Sbjct: 192 QVKVLS 197
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRAKRG AT+ S+AERVRR RIS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 232 IHVRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 291
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 292 QQVEFLS 298
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVP+ +K T+ A ML+E V+YVKFL+
Sbjct: 150 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRL 208
Query: 236 QIEELT 241
Q++ L+
Sbjct: 209 QVKVLS 214
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RA+RG AT P SIAER+RR +IS+R++ LQ+LVPN +K + + ML+E ++YVKFLQ
Sbjct: 320 RSRARRGQATDPHSIAERLRREKISERMKNLQELVPNSNK-ADKSSMLDEIIDYVKFLQL 378
Query: 236 QIEELT 241
Q++ L+
Sbjct: 379 QVKVLS 384
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LV N +K T+ A ML+E ++YVKFLQ
Sbjct: 116 RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDYVKFLQL 174
Query: 236 QIEELT 241
Q+ ++
Sbjct: 175 QVLSMS 180
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVP+ +K T+ A ML+E V+YVKFL+
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDYVKFLRL 156
Query: 236 QIEELT 241
Q++ L+
Sbjct: 157 QVKVLS 162
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVP+ +K T+ A ML+E V+YVKFL+
Sbjct: 174 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRL 232
Query: 236 QIEELT 241
Q++ L+
Sbjct: 233 QVKVLS 238
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP K T A ML+E + YV+ LQK
Sbjct: 145 HVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQK 204
Query: 236 QIEELT 241
Q+E L+
Sbjct: 205 QVEFLS 210
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP K T A ML+E + YV+ LQK
Sbjct: 145 HVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQK 204
Query: 236 QIEELT 241
Q+E L+
Sbjct: 205 QVEFLS 210
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP +K T A ML+E + YV+ LQKQ
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 237 IEELT 241
+E L+
Sbjct: 224 VEFLS 228
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVP+ +K T+ A ML+E V+YVKFL+
Sbjct: 156 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVDYVKFLRL 214
Query: 236 QIEELT 241
Q++ L+
Sbjct: 215 QVKVLS 220
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP +K T A ML+E + YV+ LQKQ
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 237 IEELT 241
+E L+
Sbjct: 224 VEFLS 228
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVP +K T+ A M++E V+YVKFL+
Sbjct: 162 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANK-TDRAAMIDEIVDYVKFLRL 220
Query: 236 QIEELT 241
Q++ L+
Sbjct: 221 QVKVLS 226
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVP+ +K T+ A ML+E V+YVKFL+
Sbjct: 57 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVDYVKFLRL 115
Query: 236 QIEELT 241
Q++ L+
Sbjct: 116 QVKVLS 121
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRAKRG AT+ S+AERVRR RIS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 245 HVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQR 304
Query: 236 QIEELT 241
Q+E L+
Sbjct: 305 QVEFLS 310
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 72/121 (59%), Gaps = 11/121 (9%)
Query: 124 AREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLE---DSVPCRVRAK 180
A +D +T S + + N H K EQ+G + + D KL E D + VRA+
Sbjct: 298 AEKDESTAKRSKSDEANGHDKAKAEQNG------NQKQNKDNTKLPEPPKDYI--HVRAR 349
Query: 181 RGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+Q+E L
Sbjct: 350 RGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 409
Query: 241 T 241
+
Sbjct: 410 S 410
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 360
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 361 RQVEFLS 367
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 360
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 361 RQVEFLS 367
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 300 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 359
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 360 RQVEFLS 366
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AERVRR +IS+R+R LQDLVP K T A ML+E + YV+ LQ+
Sbjct: 340 HVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 399
Query: 236 QIEELT 241
Q+E L+
Sbjct: 400 QVEFLS 405
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP K T A ML+E + YV+ LQKQ
Sbjct: 153 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 212
Query: 237 IEELT 241
+E L+
Sbjct: 213 VEFLS 217
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP K T A ML+E + YV+ LQKQ
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 237 IEELT 241
+E L+
Sbjct: 203 VEFLS 207
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AERVRR +IS+R+R LQDLVP K T A ML+E + YV+ LQ+
Sbjct: 340 HVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 399
Query: 236 QIEELT 241
Q+E L+
Sbjct: 400 QVEFLS 405
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 12/126 (9%)
Query: 124 AREDNNTQFPSPTA-KLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVP-------C 175
A ED N + P A + N + +K E+ + GG SN D K +S P
Sbjct: 328 ASEDWNAKRSKPNAGEGNENGQVKAEEESK--GGNSNANDEKQNK--SNSKPPEPPKDYI 383
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 384 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 443
Query: 236 QIEELT 241
Q+E L+
Sbjct: 444 QVEFLS 449
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP +K T A ML+E + YV+ LQKQ
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 237 IEELT 241
+E L+
Sbjct: 224 VEFLS 228
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP K T A ML+E + YV+ LQKQ
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 237 IEELT 241
+E L+
Sbjct: 203 VEFLS 207
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 267 IHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 326
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 327 QQVEFLS 333
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+
Sbjct: 440 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 499
Query: 236 QIEELT 241
Q+E L+
Sbjct: 500 QVENLS 505
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 360
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 361 RQVEFLS 367
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RA+RG AT P SIAER+RR RI++R+R LQ+LVPN +K T+ A ML+E ++YVKFL+ Q+
Sbjct: 127 RARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQV 185
Query: 238 EELT 241
+ L+
Sbjct: 186 KVLS 189
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK T A ML+E + YV+FLQ
Sbjct: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
Query: 236 QIEELT 241
Q+E L+
Sbjct: 242 QVEFLS 247
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 158 SNLVDMDMEKLLEDSVP---CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMD 214
SN+ + EK DS+ +RA+RG AT+ S+AERVRR +IS+R++ LQDLVP D
Sbjct: 146 SNVNKTNSEKQASDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCD 205
Query: 215 KQTNTADMLEEAVEYVKFLQKQIEELT 241
K T A ML+E + YV+ LQ QIE L+
Sbjct: 206 KVTGKAVMLDEIINYVQSLQCQIEFLS 232
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V VRAKRG AT+ S+AER+RR +IS+R++ LQDLVP +K T A ML+E + Y
Sbjct: 133 EDYV--HVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINY 190
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 191 VQSLQRQVEFLS 202
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 261 IHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 320
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 321 QQVEFLS 327
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP K T A ML+E + YV+ LQKQ
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 237 IEELT 241
+E L+
Sbjct: 203 VEFLS 207
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 405 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 464
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 465 RQVEFLS 471
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 263 IHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 322
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 323 QQVEFLS 329
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQK
Sbjct: 190 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQK 249
Query: 236 QIEELT 241
Q+E L+
Sbjct: 250 QVEFLS 255
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQK
Sbjct: 190 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQK 249
Query: 236 QIEELT 241
Q+E L+
Sbjct: 250 QVEFLS 255
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 46/62 (74%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP K T A ML+E + YV+ LQKQ
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 237 IE 238
+E
Sbjct: 206 VE 207
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 367 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 426
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 427 RQVEFLS 433
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 230 IHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 289
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 290 QQVEFLS 296
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 369 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 428
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 429 RQVEFLS 435
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 256 IHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 315
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 316 RQVEFLS 322
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 356 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 415
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 416 RQVEFLS 422
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 300 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 359
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 360 RQVEFLS 366
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ+LVP K T A ML+E + YV+ LQKQ
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 237 IEELT 241
+E L+
Sbjct: 206 VEFLS 210
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 239 HVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQ 298
Query: 236 QIEELT 241
Q+E L+
Sbjct: 299 QVEFLS 304
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 258 IHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 317
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 318 RQVEFLS 324
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 258 IHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 317
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 318 RQVEFLS 324
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 247 IHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 306
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 307 RQVEFLS 313
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+
Sbjct: 252 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 311
Query: 236 QIEELT 241
Q+E L+
Sbjct: 312 QVEFLS 317
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 288 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQ 347
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 348 RQVEFLS 354
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 304 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQ 363
Query: 236 QIEELT 241
Q+E L+
Sbjct: 364 QVEFLS 369
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 118 PNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVP--C 175
PN + +++ PS +A + HS K E+S ++ E
Sbjct: 187 PNEVMGTDQVHSSNLPSDSANESVHSKDKGEESSPATTNGGKSKGKGAKETYESQKEEYI 246
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+
Sbjct: 247 HVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 306
Query: 236 QIEELT 241
Q+E L+
Sbjct: 307 QVEFLS 312
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R+R LQ+LVP DK T A ML+E + YV+ LQ
Sbjct: 134 IHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQ 193
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 194 TQVEFLS 200
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V +RAKRG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + Y
Sbjct: 133 EDYV--HIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 190
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 191 VQSLQRQVEFLS 202
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 219 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 278
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 279 RQVEFLS 285
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 240 IHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 299
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 300 QQVEFLS 306
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+
Sbjct: 367 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 426
Query: 236 QIEELT 241
Q+E L+
Sbjct: 427 QVEFLS 432
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
Query: 118 PNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVP--- 174
PN + +++ PS +A + HS K E+S +N + E S
Sbjct: 187 PNEVMGTDQVHSSNLPSDSANESVHSKDKGEESSPA---TTNGGKSKGKGAKETSESQKE 243
Query: 175 --CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKF 232
VRA+RG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + YV+
Sbjct: 244 EYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQS 303
Query: 233 LQKQIEELT 241
LQ+Q+E L+
Sbjct: 304 LQRQVEFLS 312
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 384 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 443
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 444 RQVEFLS 450
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 371 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 430
Query: 236 QIEELT 241
Q+E L+
Sbjct: 431 QVEFLS 436
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 371 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 430
Query: 236 QIEELT 241
Q+E L+
Sbjct: 431 QVEFLS 436
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+
Sbjct: 316 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 375
Query: 236 QIEELT 241
Q+E L+
Sbjct: 376 QVEFLS 381
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 164 DMEKLLEDSVP--CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
D K+ E P VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A
Sbjct: 241 DTSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 300
Query: 222 MLEEAVEYVKFLQKQIEELT 241
ML+E + YV+ LQ+Q+E L+
Sbjct: 301 MLDEIINYVQSLQRQVEFLS 320
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 184 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQR 243
Query: 236 QIEELT 241
Q+E L+
Sbjct: 244 QVEFLS 249
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 261 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 320
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 321 RQVEFLS 327
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V +RAKRG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + Y
Sbjct: 141 EDYV--HIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 198
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 199 VQSLQRQVEFLS 210
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D E ED V +RAKRG AT+ S+AER RR +I++R++ LQDLVP +K T A ML
Sbjct: 107 DAESNREDYV--HIRAKRGQATNNHSLAERFRREKINERMKHLQDLVPGCNKITGKAMML 164
Query: 224 EEAVEYVKFLQKQIEELT 241
+E + YV+ LQ+Q+E L+
Sbjct: 165 DEIINYVQSLQRQVEFLS 182
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R+R LQ+LVP DK T A ML+E + YV+ LQ
Sbjct: 135 IHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQ 194
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 195 NQVEFLS 201
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 254 IHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 313
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 314 RQVEFLS 320
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V +RAKRG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + Y
Sbjct: 135 EDYV--HIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 192
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 193 VQSLQRQVEFLS 204
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 239 IHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 298
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 299 RQVEFLS 305
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 47/75 (62%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRAKRG AT SIAERVRR +I++++R LQDLVP K A MLEE + YV LQ
Sbjct: 148 HVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQN 207
Query: 236 QIEELTEHQRRCKCS 250
Q+E L+ CS
Sbjct: 208 QVEFLSMELAAASCS 222
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 338 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 397
Query: 236 QIEELT 241
Q+E L+
Sbjct: 398 QVEFLS 403
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V VRAKRG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + Y
Sbjct: 142 EDYV--HVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 199
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 200 VQSLQRQVEFLS 211
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 289 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 348
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 349 RQVEFLS 355
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%)
Query: 167 KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
K+L VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E
Sbjct: 44 KILSKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEI 103
Query: 227 VEYVKFLQKQIEELT 241
+ YV+ LQ+Q+E L+
Sbjct: 104 INYVQSLQRQVESLS 118
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V +RAKRG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + Y
Sbjct: 101 EDYV--HIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 158
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 159 VQSLQRQVEFLS 170
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RAKRG AT+ S+AER+RR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 136 VHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQ 195
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 196 RQVEFLS 202
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 239 IHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 298
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 299 RQVEFLS 305
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 372 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 431
Query: 236 QIEELT 241
Q+E L+
Sbjct: 432 QVEFLS 437
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 74/132 (56%), Gaps = 10/132 (7%)
Query: 118 PNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQS-------GQVPGGVSNLVDMDM-EKLL 169
PN + + P+ +A + HS K E+S G PG + ++ E
Sbjct: 192 PNEVVGGDQVQSANLPADSANESVHSMDKGEESSPATTTAGAGPGKSRGKGEKEVPESQK 251
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED + +RA+RG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + Y
Sbjct: 252 EDYI--HIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINY 309
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 310 VQSLQRQVEFLS 321
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
Query: 118 PNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVP--- 174
PN + +++ PS +A + HS K E+S +N + E S
Sbjct: 568 PNEVMGTDQVHSSNLPSDSANESVHSKDKGEESSPA---TTNGGKSKGKGAKETSESQKE 624
Query: 175 --CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKF 232
VRA+RG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + YV+
Sbjct: 625 EYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQS 684
Query: 233 LQKQIEELT 241
LQ+Q+E L+
Sbjct: 685 LQRQVEFLS 693
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 348 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 407
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 408 RQVEFLS 414
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 357 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 416
Query: 236 QIEELT 241
Q+E L+
Sbjct: 417 QVEFLS 422
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 371 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 430
Query: 236 QIEELT 241
Q+E L+
Sbjct: 431 QVEFLS 436
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 250 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 309
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 310 RQVEFLS 316
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AERVRR +IS+R++ LQDLVP DK T A ML+E + YV+ LQ
Sbjct: 221 IHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQ 280
Query: 235 KQIEELT 241
QIE L+
Sbjct: 281 CQIEFLS 287
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 256 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 315
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 316 RQVEFLS 322
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 251 IHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 310
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 311 RQVEFLS 317
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+SI R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 206 KTRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 264
Query: 236 QIEELT 241
QI+ L+
Sbjct: 265 QIKLLS 270
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 256 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 315
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 316 RQVEFLS 322
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R++ LQ LVP +K T A ML+E + YV+ LQ
Sbjct: 245 IHVRARRGQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQ 304
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 305 RQVEFLS 311
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 236 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 295
Query: 236 QIEELT 241
Q+E L+
Sbjct: 296 QVEFLS 301
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 162 HVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQ 221
Query: 236 QIEELT 241
Q+E L+
Sbjct: 222 QVEFLS 227
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ
Sbjct: 123 IHVRARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQ 182
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 183 NQVEFLS 189
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 367 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 426
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 427 RQVEFLS 433
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 351 IHVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 410
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 411 RQVEFLS 417
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 256 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 315
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 316 RQVEFLS 322
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 148 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 207
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 208 RQVEFLS 214
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RAK+GCA P+SIA R RR RISDR++ LQ+L+PN K + MLE+A+ YVKFLQ Q+
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSK-VDLVTMLEKAINYVKFLQLQV 467
Query: 238 EEL 240
+ L
Sbjct: 468 KVL 470
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 25 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 84
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 85 RQVEFLS 91
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RAK+GCA P+SIA R RR RISDR++ LQ+L+PN K + MLE+A+ YVKFLQ Q+
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSK-VDLVTMLEKAINYVKFLQLQV 467
Query: 238 EEL 240
+ L
Sbjct: 468 KVL 470
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AERVRR +IS+R++ LQDLVP DK T A ML+E + YV+ LQ
Sbjct: 170 IHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQ 229
Query: 235 KQIEELT 241
QIE L+
Sbjct: 230 CQIEFLS 236
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 158 SNLVDMDMEKLLEDSVP--CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
S LV D +K E++ VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK
Sbjct: 143 SKLVAKDEKKANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDK 202
Query: 216 QTNTADMLEEAVEYVKFLQKQIEELT 241
T A ML+E + YV+ LQ Q+E L+
Sbjct: 203 VTGKALMLDEIINYVQSLQNQVEFLS 228
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 74 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 133
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 134 RQVEFLS 140
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R++ LQ+LVPN K + + MLEEAVEYVKFLQ
Sbjct: 258 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQL 316
Query: 236 QIEELT 241
QI+ L+
Sbjct: 317 QIKLLS 322
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 166 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 225
Query: 236 QIEELT 241
Q+E L+
Sbjct: 226 QVEFLS 231
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP+ +K T A ML+E + YV+ LQ+
Sbjct: 31 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQR 90
Query: 236 QIEELT 241
Q+E L+
Sbjct: 91 QVEFLS 96
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 77 IHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 136
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 137 QQVEFLS 143
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R+ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 193 HVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINYVQSLQR 252
Query: 236 QIEELT 241
Q+E L+
Sbjct: 253 QVEFLS 258
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V +RAKRG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + Y
Sbjct: 26 EDYV--HIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 83
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 84 VQSLQRQVEFLS 95
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 193 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 252
Query: 236 QIEELT 241
Q+E L+
Sbjct: 253 QVEFLS 258
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+Q
Sbjct: 234 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 293
Query: 237 IEELT 241
+E L+
Sbjct: 294 VEFLS 298
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+Q
Sbjct: 388 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 447
Query: 237 IEELT 241
+E L+
Sbjct: 448 VESLS 452
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 189 HVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQR 248
Query: 236 QIEELT 241
Q+E L+
Sbjct: 249 QVEFLS 254
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ
Sbjct: 137 IHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQ 196
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 197 NQVEFLS 203
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+Q
Sbjct: 145 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 204
Query: 237 IEELT 241
+E L+
Sbjct: 205 VEFLS 209
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 254 IHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 313
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 314 RQVEFLS 320
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+Q
Sbjct: 73 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 132
Query: 237 IEELT 241
IE L+
Sbjct: 133 IEFLS 137
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R++ LQ+LVPN K + + MLEEAVEYVKFLQ
Sbjct: 254 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQL 312
Query: 236 QIEELT 241
QI+ L+
Sbjct: 313 QIKLLS 318
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ
Sbjct: 110 HVRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQN 169
Query: 236 QIEELT 241
Q+E L+
Sbjct: 170 QVEFLS 175
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 244 IHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 303
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 304 RQVEFLS 310
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ
Sbjct: 137 IHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQ 196
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 197 NQVEFLS 203
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R++ LQ+LVPN K + + MLEEAVEYVKFLQ
Sbjct: 253 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQL 311
Query: 236 QIEELT 241
QI+ L+
Sbjct: 312 QIKLLS 317
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 402 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 461
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 462 RQVEFLS 468
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ
Sbjct: 120 IHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQ 179
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 180 NQVEFLS 186
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 170 EDSVP---CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
ED P VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E
Sbjct: 113 EDEPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEI 172
Query: 227 VEYVKFLQKQIEELT 241
+ YV+ LQ Q+E L+
Sbjct: 173 INYVQSLQNQVEFLS 187
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ
Sbjct: 110 HVRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQN 169
Query: 236 QIEELT 241
Q+E L+
Sbjct: 170 QVEFLS 175
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ
Sbjct: 109 IHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQ 168
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 169 NQVEFLS 175
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E + YV+ LQ
Sbjct: 257 IHVRARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQ 316
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 317 RQVEFLS 323
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 192 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 251
Query: 236 QIEELT 241
Q+E L+
Sbjct: 252 QVEFLS 257
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ
Sbjct: 119 IHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQ 178
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 179 NQVEFLS 185
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 204 IHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 263
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 264 QQVEFLS 270
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 193 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 252
Query: 236 QIEELT 241
Q+E L+
Sbjct: 253 QVEFLS 258
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ
Sbjct: 107 IHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQ 166
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 167 NQVEFLS 173
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+FLQ+Q
Sbjct: 6 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQ 65
Query: 237 IE 238
+E
Sbjct: 66 VE 67
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 193 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 252
Query: 236 QIEELT 241
Q+E L+
Sbjct: 253 QVEFLS 258
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 158 SNLVDMDMEKLLEDSVP--CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
S LV D +K E++ VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK
Sbjct: 132 SKLVAKDEKKANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQSLVPGCDK 191
Query: 216 QTNTADMLEEAVEYVKFLQKQIEELT 241
T A ML+E + YV+ LQ Q+E L+
Sbjct: 192 VTGKALMLDEIINYVQSLQNQVEFLS 217
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 202 IHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 261
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 262 QQVEFLS 268
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+Q
Sbjct: 129 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQ 188
Query: 237 IEELT 241
+E L+
Sbjct: 189 VEFLS 193
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 203 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 262
Query: 236 QIEELT 241
Q+E L+
Sbjct: 263 QVEFLS 268
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRAKRG AT+ S+AER RR +I++R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 124 HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQR 183
Query: 236 QIEELT 241
Q+E L+
Sbjct: 184 QVEFLS 189
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 210 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQR 269
Query: 236 QIEELT 241
Q+E L+
Sbjct: 270 QVEFLS 275
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 264 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 322
Query: 236 QIEELT 241
QI+ L+
Sbjct: 323 QIKLLS 328
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 203 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 262
Query: 236 QIEELT 241
Q+E L+
Sbjct: 263 QVEFLS 268
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 248 HVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 307
Query: 236 QIEELT 241
Q+E L+
Sbjct: 308 QVEFLS 313
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ
Sbjct: 262 IHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQ 321
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 322 RQVEFLS 328
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 253 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQH 312
Query: 236 QIEELT 241
Q+E L+
Sbjct: 313 QVEFLS 318
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 203 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 262
Query: 236 QIEELT 241
Q+E L+
Sbjct: 263 QVEFLS 268
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V VRAKRG AT+ S+AER RR +I++R++ LQDLVP +K T A ML+E + Y
Sbjct: 119 EDYV--HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 176
Query: 230 VKFLQKQIEELT 241
V+ LQ+QIE L+
Sbjct: 177 VQSLQRQIEFLS 188
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ
Sbjct: 262 IHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQ 321
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 322 RQVEFLS 328
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 323
Query: 236 QIEELT 241
QI+ L+
Sbjct: 324 QIKLLS 329
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 248 HVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 307
Query: 236 QIEELT 241
Q+E L+
Sbjct: 308 QVEFLS 313
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ
Sbjct: 118 IHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQ 177
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 178 NQVEFLS 184
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V VRAKRG AT+ S+AER RR +I++R++ LQDLVP +K T A ML+E + Y
Sbjct: 93 EDYV--HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 150
Query: 230 VKFLQKQIEELT 241
V+ LQ+QIE L+
Sbjct: 151 VQSLQRQIEFLS 162
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+Q
Sbjct: 239 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 298
Query: 237 IEELT 241
+E L+
Sbjct: 299 VEFLS 303
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEAV+YVKFLQ
Sbjct: 263 KTRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQL 321
Query: 236 QIEELT 241
QI+ L+
Sbjct: 322 QIKLLS 327
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ Q
Sbjct: 131 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQ 190
Query: 237 IEELT 241
+E L+
Sbjct: 191 VEFLS 195
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V VRAKRG AT+ S+AER RR +I++R++ LQDLVP +K T A ML+E + Y
Sbjct: 119 EDYV--HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 176
Query: 230 VKFLQKQIEELT 241
V+ LQ+QIE L+
Sbjct: 177 VQSLQRQIEFLS 188
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+Q
Sbjct: 69 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 128
Query: 237 IEELT 241
IE L+
Sbjct: 129 IEFLS 133
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK T A ML+E + YV+ LQ
Sbjct: 179 HVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQN 238
Query: 236 QIEELT 241
Q+E L+
Sbjct: 239 QVEFLS 244
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I +R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 299 IHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 358
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 359 RQVEFLS 365
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK T A ML+E + YV+ LQ
Sbjct: 179 HVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQN 238
Query: 236 QIEELT 241
Q+E L+
Sbjct: 239 QVEFLS 244
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 184 HVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQR 243
Query: 236 QIEELT 241
Q+E L+
Sbjct: 244 QVEFLS 249
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E + YV+ LQ+
Sbjct: 368 HVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQR 427
Query: 236 QIEELT 241
Q+E L+
Sbjct: 428 QVEFLS 433
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+Q
Sbjct: 33 VRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQ 92
Query: 237 IEELT 241
+E L+
Sbjct: 93 VEFLS 97
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 152 IHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 211
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 212 QQVEFLS 218
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S++ERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ
Sbjct: 103 IHVRARRGQATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQ 162
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 163 NQVEFLS 169
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 251 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 310
Query: 236 QIEELT 241
Q+E L+
Sbjct: 311 QVEFLS 316
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 276 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 335
Query: 236 QIEELT 241
Q+E L+
Sbjct: 336 QVEFLS 341
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E + YV+ LQ+
Sbjct: 324 HVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQR 383
Query: 236 QIEELT 241
Q+E L+
Sbjct: 384 QVEFLS 389
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I +R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 297 IHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 356
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 357 RQVEFLS 363
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 262 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 320
Query: 236 QIEELT 241
QI+ L+
Sbjct: 321 QIKLLS 326
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I +R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 299 IHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 358
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 359 RQVEFLS 365
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRAKRG AT+ S+AER RR +I++R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 627 HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQR 686
Query: 236 QIEELT 241
Q+E L+
Sbjct: 687 QVEFLS 692
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRAKRG AT+ S+AER RR +I++R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 627 HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQR 686
Query: 236 QIEELT 241
Q+E L+
Sbjct: 687 QVEFLS 692
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 323
Query: 236 QIEELT 241
QI+ L+
Sbjct: 324 QIKLLS 329
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRAKRG AT+ S+AER RR +I++R++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 627 HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQR 686
Query: 236 QIEELT 241
Q+E L+
Sbjct: 687 QVEFLS 692
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 214 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 273
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 274 HQVEFLS 280
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ Q
Sbjct: 139 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 198
Query: 237 IEELT 241
+E L+
Sbjct: 199 VEFLS 203
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 279 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 338
Query: 236 QIEELT 241
Q+E L+
Sbjct: 339 QVEFLS 344
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V VRAKRG AT+ S+AER RR +I++R++ LQDLVP +K T A ML+E + Y
Sbjct: 119 EDYV--HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 176
Query: 230 VKFLQKQIEELT 241
V+ LQ+QIE L+
Sbjct: 177 VQSLQRQIEFLS 188
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 269 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 328
Query: 236 QIEELT 241
Q+E L+
Sbjct: 329 QVEFLS 334
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V VRAKRG AT+ S+AER RR +I++R++ LQDLVP +K T A ML+E + Y
Sbjct: 123 EDYV--HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 180
Query: 230 VKFLQKQIEELT 241
V+ LQ+QIE L+
Sbjct: 181 VQSLQRQIEFLS 192
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
G AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ Q++ L+
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 47/75 (62%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRAKRG AT SIAER+RR +I++++R LQD+VP K A MLEE + YV LQ
Sbjct: 157 HVRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHSLQN 216
Query: 236 QIEELTEHQRRCKCS 250
Q+E L+ CS
Sbjct: 217 QVEFLSMELAAASCS 231
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
G AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ Q++ L+
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 279 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 338
Query: 236 QIEELT 241
Q+E L+
Sbjct: 339 QVEFLS 344
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+Q
Sbjct: 64 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 123
Query: 237 IEELT 241
+E L+
Sbjct: 124 VEFLS 128
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V VRAKRG AT+ S+AER RR +I++R++ LQDLVP +K T A ML+E + Y
Sbjct: 93 EDYV--HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 150
Query: 230 VKFLQKQIEELT 241
V+ LQ+QIE L+
Sbjct: 151 VQSLQRQIEFLS 162
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A MLEE + YV+ LQ+Q
Sbjct: 6 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQRQ 65
Query: 237 IEELT 241
IE L+
Sbjct: 66 IEFLS 70
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 74 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 133
Query: 235 KQIEELT 241
+QIE L+
Sbjct: 134 RQIEFLS 140
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 286 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 344
Query: 236 QIEELT 241
QI+ L+
Sbjct: 345 QIKLLS 350
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV+YVKFLQ Q
Sbjct: 187 TRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQ 245
Query: 237 IEELT 241
I+ L+
Sbjct: 246 IKLLS 250
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 286 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 344
Query: 236 QIEELT 241
QI+ L+
Sbjct: 345 QIKLLS 350
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA++G AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+
Sbjct: 175 HVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQR 234
Query: 236 QIEELT 241
Q+E L+
Sbjct: 235 QVEFLS 240
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV+YVKFLQ Q
Sbjct: 187 TRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQ 245
Query: 237 IEELT 241
I+ L+
Sbjct: 246 IKLLS 250
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 173 HVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 232
Query: 236 QIEELT 241
Q+E L+
Sbjct: 233 QVEFLS 238
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R++ LQ LVP DK T A ML+E + YV+ LQ
Sbjct: 172 IHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQ 231
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 232 NQVEFLS 238
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK T A ML+E + YV+ LQ
Sbjct: 179 HVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN 238
Query: 236 QIEELT 241
Q+E L+
Sbjct: 239 QVEFLS 244
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA +G AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV+YVKFLQ
Sbjct: 223 KTRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 281
Query: 236 QIEELT 241
QI+ L+
Sbjct: 282 QIKLLS 287
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 173 HVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 232
Query: 236 QIEELT 241
Q+E L+
Sbjct: 233 QVEFLS 238
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 278 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 337
Query: 236 QIEELT 241
Q+E L+
Sbjct: 338 QVEFLS 343
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V VRAKRG AT+ S+AER RR +I++R++ LQDLVP +K T A ML+E + Y
Sbjct: 118 EDYV--HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 175
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 176 VQSLQRQVEFLS 187
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDL+P +K A ML+E + YV+ LQ+
Sbjct: 191 HVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQR 250
Query: 236 QIEELT 241
Q+E L+
Sbjct: 251 QVEFLS 256
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK T A ML+E + YV+ LQ
Sbjct: 147 HVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQN 206
Query: 236 QIEELT 241
Q+E L+
Sbjct: 207 QVEFLS 212
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 92 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 150
Query: 236 QIEELT 241
QI+ L+
Sbjct: 151 QIKLLS 156
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 263 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQL 321
Query: 236 QIEELT 241
QI+ L+
Sbjct: 322 QIKLLS 327
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R++ LQ LVP +K T A ML+E + YV+ LQ
Sbjct: 109 IHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQ 168
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 169 RQVEFLS 175
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDL+P +K A ML+E + YV+ LQ+
Sbjct: 191 HVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQR 250
Query: 236 QIEELT 241
Q+E L+
Sbjct: 251 QVEFLS 256
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 142 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQR 201
Query: 236 QIEELT 241
Q+E L+
Sbjct: 202 QVEFLS 207
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +I+ R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 295 HVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQSLQH 354
Query: 236 QIEELT 241
Q+E L+
Sbjct: 355 QVEFLS 360
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R++ LQ LVP +K T A ML+E + YV+ LQ
Sbjct: 79 IHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQ 138
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 139 RQVEFLS 145
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +I +R++ LQDLVP K T A ML+E + YV+ LQ+Q
Sbjct: 256 VRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 315
Query: 237 IEELT 241
+E L+
Sbjct: 316 VEFLS 320
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEAV+YVKFLQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 236 QIEELT 241
QI+ L+
Sbjct: 295 QIKLLS 300
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEAV+YVKFLQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 236 QIEELT 241
QI+ L+
Sbjct: 295 QIKLLS 300
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 260 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQL 318
Query: 236 QIEELT 241
QI+ L+
Sbjct: 319 QIKLLS 324
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEAV+YVKFLQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VHISTMLEEAVQYVKFLQL 294
Query: 236 QIEELT 241
QI+ L+
Sbjct: 295 QIKLLS 300
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AERVRR +IS+R+R LQ+L P +K T A ML+E + YV+ LQ
Sbjct: 204 IHMRARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQ 263
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 264 QQVEFLS 270
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ+Q
Sbjct: 58 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 117
Query: 237 IEELT 241
+E L+
Sbjct: 118 VEFLS 122
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 73 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 132
Query: 236 QIEELT 241
Q+E L+
Sbjct: 133 QVEFLS 138
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP+ K T A ML+E + YV+ LQ+Q
Sbjct: 25 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYVQSLQRQ 84
Query: 237 IEELT 241
IE L+
Sbjct: 85 IEFLS 89
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D EK SV + RA +G AT P+S+ R RR +I++R++ LQ+LVPN K + + ML
Sbjct: 154 DDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTML 212
Query: 224 EEAVEYVKFLQKQIEELT 241
EEAV YVKFLQ QI+ L+
Sbjct: 213 EEAVHYVKFLQLQIKLLS 230
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA++G AT+ S+AER+RR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 172 IHVRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQ 231
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 232 RQVEFLS 238
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RAKRG AT P+S+ R RR +I++R++ LQ+LVPN K + ML+EA+ YVKFLQ
Sbjct: 441 KPRAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAK-VDIVTMLDEAIHYVKFLQT 499
Query: 236 QIEEL 240
Q+E L
Sbjct: 500 QVELL 504
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 155 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 214
Query: 236 QIEELT 241
Q+E L+
Sbjct: 215 QVEFLS 220
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +I +R++ LQ LVP+ +K T A ML+E + YV+ LQ+
Sbjct: 257 HVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQR 316
Query: 236 QIEELT 241
Q+E L+
Sbjct: 317 QVEFLS 322
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ Q
Sbjct: 278 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQ 337
Query: 237 IEELT 241
+E L+
Sbjct: 338 VEFLS 342
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RA++G A P+SIA R RR RISDR++ LQ+LVPN K + MLE+A+ YVKFLQ Q+
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTK-VDLVTMLEKAINYVKFLQLQV 417
Query: 238 EELT 241
+ LT
Sbjct: 418 KVLT 421
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQ 317
Query: 237 IEELT 241
+E L+
Sbjct: 318 VEFLS 322
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 121 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQC 180
Query: 236 QIEELT 241
Q+E L+
Sbjct: 181 QVEFLS 186
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK T A ML+E + YV+ LQ
Sbjct: 146 HVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQN 205
Query: 236 QIEELT 241
Q+E L+
Sbjct: 206 QVEFLS 211
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R++ LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 215 KSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQL 273
Query: 236 QIEELT 241
QI+ L+
Sbjct: 274 QIKLLS 279
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 156 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 215
Query: 236 QIEELT 241
Q+E L+
Sbjct: 216 QVEFLS 221
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK T A ML+E + YV+ LQ
Sbjct: 171 HVRARRGQATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQN 230
Query: 236 QIEELT 241
Q+E L+
Sbjct: 231 QVEFLS 236
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D EK SV + RA +G AT P+S+ R RR +I++R++ LQ+LVPN K + + ML
Sbjct: 154 DDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTML 212
Query: 224 EEAVEYVKFLQKQIEELT 241
EEAV YVKFLQ QI+ L+
Sbjct: 213 EEAVHYVKFLQLQIKLLS 230
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK T A ML+E + YV+ LQ Q
Sbjct: 135 VRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQ 194
Query: 237 IEELT 241
+E L+
Sbjct: 195 VEFLS 199
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
G AT P SIAER+RR RI++R++ LQ+LVP+ +K T+ A ML+E ++YVKFLQ Q++ L+
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQLQVKVLS 227
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 156 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 215
Query: 236 QIEELT 241
Q+E L+
Sbjct: 216 QVEFLS 221
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK T A ML+E + YV+ LQ
Sbjct: 170 HVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQN 229
Query: 236 QIEELT 241
Q+E L+
Sbjct: 230 QVEFLS 235
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 156 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 215
Query: 236 QIEELT 241
Q+E L+
Sbjct: 216 QVEFLS 221
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 251 HFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 310
Query: 236 QIEELT 241
Q+E L+
Sbjct: 311 QVEFLS 316
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ
Sbjct: 154 VHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQ 213
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 214 QQVEFLS 220
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 155 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 214
Query: 236 QIEELT 241
Q+E L+
Sbjct: 215 QVEFLS 220
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+Q
Sbjct: 158 VRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 217
Query: 237 IEELT 241
+E L+
Sbjct: 218 VEFLS 222
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS R++ LQDLVP +K A ML+E + YV+ LQ+
Sbjct: 156 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 215
Query: 236 QIEELT 241
Q+E L+
Sbjct: 216 QVEFLS 221
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV+YVKFLQ
Sbjct: 236 KARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 236 QIEELT 241
QI+ L+
Sbjct: 295 QIKLLS 300
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 273 KTRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTK-VDISTMLEEAVNYVKFLQT 331
Query: 236 QIEELT 241
QI+ T
Sbjct: 332 QIKVCT 337
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK T A ML+E + YV+ LQ
Sbjct: 170 VHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQ 229
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 230 NQVEFLS 236
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 45/67 (67%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRAKRG AT SIAERVRR +I++++R LQDLVP + A MLEE + YV LQ
Sbjct: 146 IHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQ 205
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 206 NQVEFLS 212
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AER RR +IS +++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 189 HVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 248
Query: 236 QIEELT 241
Q+E L+
Sbjct: 249 QVEFLS 254
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RAKRG AT P+S+ R RR RI++R++ LQ LVPN K + MLEEA+ YVKFLQ
Sbjct: 210 KPRAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAK-VDIVTMLEEAIHYVKFLQL 268
Query: 236 QIEELT 241
Q+ L+
Sbjct: 269 QVNMLS 274
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AER RR +IS +++ LQDLVP +K T A ML+E + YV+ LQ+
Sbjct: 189 HVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 248
Query: 236 QIEELT 241
Q+E L+
Sbjct: 249 QVEFLS 254
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEAV+YVKFLQ QI
Sbjct: 248 RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTK-VDISTMLEEAVQYVKFLQLQI 306
Query: 238 EELT 241
+ L+
Sbjct: 307 KLLS 310
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R++ LQ LVP DK T A ML+E + YV+ LQ
Sbjct: 163 HVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQN 222
Query: 236 QIEELT 241
Q+E L+
Sbjct: 223 QVEFLS 228
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 10/107 (9%)
Query: 145 LKVEQSGQVPGGVSNLVD---MDMEKLLEDSVP-------CRVRAKRGCATHPRSIAERV 194
+KV +S GG+ VD D +KL E S VRA+RG AT S+AER
Sbjct: 105 MKVVESRDENGGIKAEVDPNSSDGKKLAEQSPKPEPPKDYIHVRARRGQATDSHSLAERA 164
Query: 195 RRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q+E L+
Sbjct: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEAV+YVKFLQ
Sbjct: 183 KSRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQL 241
Query: 236 QIEELT 241
QI+ L+
Sbjct: 242 QIKLLS 247
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEAV YVKFLQ
Sbjct: 236 KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQL 294
Query: 236 QIEELT 241
QI+ L+
Sbjct: 295 QIKLLS 300
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Query: 185 THPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
T P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ Q++ L+
Sbjct: 221 TDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLS 276
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEAV YVKFLQ
Sbjct: 236 KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQL 294
Query: 236 QIEELT 241
QI+ L+
Sbjct: 295 QIKLLS 300
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+Q
Sbjct: 16 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 75
Query: 237 IEELT 241
+E L+
Sbjct: 76 VEFLS 80
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 148 EQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ 207
+ S ++ GG S+ +D ++ + + R++RG AT P+SI R RR +I++R++ LQ
Sbjct: 219 DDSNELNGGGSSSLDQKDSTTIK--LKGKSRSERGSATDPQSIYARRRREKINERLKILQ 276
Query: 208 DLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
+LVPN K + + MLEEAV+YVKFLQ QI+ L+
Sbjct: 277 NLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLLS 309
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D EK SV + RA +G AT P+S+ R RR +I++R++ LQ+LVPN K + + ML
Sbjct: 154 DDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTML 212
Query: 224 EEAVEYVKFLQKQIE 238
EEAV YVKFLQ QI+
Sbjct: 213 EEAVHYVKFLQLQIK 227
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEAV YVKFLQ
Sbjct: 236 KSRASRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQL 294
Query: 236 QIEELT 241
QI+ L+
Sbjct: 295 QIKLLS 300
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS +++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 185 IHVRARRGQATDRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQ 244
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 245 RQVEFLS 251
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 145 LKVEQSGQVPGGVSNLVDMDMEKLLEDSVP----CRVRAKRGCATHPRSIAERVRRTRIS 200
LK ++ V G SN D K E P VRA+RG AT SIAER RR +IS
Sbjct: 85 LKAAEASSVAG--SNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKIS 142
Query: 201 DRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
+R++ LQDLVP +K A +L+E + Y++ LQ Q+E L+
Sbjct: 143 ERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLS 183
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R+ LQDLVP ++ T A ML+E + YV+ LQ+Q
Sbjct: 194 VRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQ 253
Query: 237 IEELT 241
+E L+
Sbjct: 254 VEFLS 258
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+ G AT+ S+AERVRR +IS+R++ LQDLVP K A ML+E + YV+ LQ
Sbjct: 261 IHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQ 320
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 321 RQVEFLS 327
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEA +YVKFLQ QI
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAAQYVKFLQLQI 253
Query: 238 EELT 241
+ L+
Sbjct: 254 KLLS 257
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R+ LQDLVP ++ T A ML+E + YV+ LQ+Q
Sbjct: 191 VRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQ 250
Query: 237 IEELT 241
+E L+
Sbjct: 251 VEFLS 255
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R+ LQ LVP DK T A +LEE + YV+ LQ
Sbjct: 118 HVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQH 177
Query: 236 QIEELT 241
Q+E L+
Sbjct: 178 QVEFLS 183
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+RA+ G AT+ S+AERVRR +IS+R++ LQDLVP K A ML+E + YV+ LQ+
Sbjct: 264 HIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQR 323
Query: 236 QIEELT 241
Q+E L+
Sbjct: 324 QVEFLS 329
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RAKRG AT P+S+ R RR +I++R++ LQ LVPN +Q + MLEEA+ +VKFL+
Sbjct: 469 RPRAKRGSATDPQSVYARHRREKINERLKTLQRLVPN-GEQVDIVTMLEEAIHFVKFLEF 527
Query: 236 QIEEL 240
Q+E L
Sbjct: 528 QLELL 532
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT SIAER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 110 IHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQ 169
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 170 RQVEFLS 176
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA G AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV+YVKFLQ
Sbjct: 263 KSRATTGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 321
Query: 236 QIEELT 241
QI+ L+
Sbjct: 322 QIKLLS 327
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+ G AT+ S+AERVRR +IS+R++ LQDLVP K A ML+E + YV+ LQ
Sbjct: 261 IHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQ 320
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 321 RQVEFLS 327
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +I +R++ LQDLVP K T A ML+E + YV+ LQ+Q
Sbjct: 256 VRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 315
Query: 237 IE 238
+E
Sbjct: 316 VE 317
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT SIAERVRR +I++R++ LQD+VP K A ML+E + YV+ LQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 236 QIEELT 241
Q+E L+
Sbjct: 206 QVEFLS 211
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRAKRG AT+ S+AER RR +I+ R++ LQDLVP +K T A ML+E + YV+ LQ+Q
Sbjct: 154 VRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 213
Query: 237 IEELT 241
+E L+
Sbjct: 214 VEFLS 218
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT SIAERVRR +I++R++ LQD+VP K A ML+E + YV+ LQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 236 QIEELT 241
Q+E L+
Sbjct: 206 QVEFLS 211
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RAKRG AT P+SI R RR RI++R+R LQ LVPN K + MLEEA+ YVKFLQ Q+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAK-VDIVTMLEEAINYVKFLQLQL 296
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG +T P+S+ R RR RI++R++ LQ LVPN K + + MLEEAV YVKFLQ
Sbjct: 214 KARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTK-VDMSTMLEEAVHYVKFLQL 272
Query: 236 QIEELT 241
QI+ L+
Sbjct: 273 QIKVLS 278
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I+ +++ LQDLVP +K A ML+E + YV+ LQ
Sbjct: 175 VHVRARRGQATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQ 234
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 235 QQVEFLS 241
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I++R+R LQD+VP K A ML+E + YV+ LQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 203 NQVEFLS 209
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +I++R+R LQD+VP K A ML+E + YV+ LQ
Sbjct: 1027 HVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQN 1086
Query: 236 QIEELT 241
Q+E L+
Sbjct: 1087 QVEFLS 1092
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E + YV+ LQ
Sbjct: 183 IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQ 242
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 243 RQVEFLS 249
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT SIAERVRR +I++R++ LQD+VP K A ML+E + YV+ LQ
Sbjct: 135 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 194
Query: 236 QIEELT 241
Q+E L+
Sbjct: 195 QVEFLS 200
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E + YV+ LQ
Sbjct: 183 IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQ 242
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 243 RQVEFLS 249
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E + YV+ LQ
Sbjct: 166 IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQ 225
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 226 RQVEFLS 232
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER+RR +I++R+R LQD+VP K A ML+E + YV+ LQ
Sbjct: 151 VHVRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQ 210
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 211 NQVEFLS 217
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRAKRG AT+ S+AER RR +I+ R++ LQDLVP +K T A ML+E + YV+ LQ+Q
Sbjct: 154 VRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 213
Query: 237 IEELT 241
+E L+
Sbjct: 214 VEFLS 218
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR +I++R+R LQ+LVPN K + + MLE+A+ YVKFLQ
Sbjct: 183 KARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIHYVKFLQL 241
Query: 236 QIEELT 241
QI+ L+
Sbjct: 242 QIKLLS 247
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR +I++R+R LQ+LVPN K + + MLE+A+ YVKFLQ
Sbjct: 197 KARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIHYVKFLQL 255
Query: 236 QIEELT 241
QI+ L+
Sbjct: 256 QIKLLS 261
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR RIS+R++ LQ+LVP K A L+E + YV+ LQ+
Sbjct: 131 HVRARRGQATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQR 190
Query: 236 QIEELT 241
Q+E L+
Sbjct: 191 QVEFLS 196
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 109 SSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVP-GGVSNLVDMDMEK 167
SS+ V N + RA N + P + +K E + G SN+ + +
Sbjct: 72 SSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS 131
Query: 168 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAV 227
++ VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E +
Sbjct: 132 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 228 EYVKFLQKQIEELT 241
YV+ LQ+Q+E L+
Sbjct: 192 NYVQSLQQQVEFLS 205
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 109 SSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVP-GGVSNLVDMDMEK 167
SS+ V N + RA N + P + +K E + G SN+ + +
Sbjct: 68 SSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS 127
Query: 168 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAV 227
++ VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E +
Sbjct: 128 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 187
Query: 228 EYVKFLQKQIEELT 241
YV+ LQ+Q+E L+
Sbjct: 188 NYVQSLQQQVEFLS 201
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +I++R+R LQD+VP K A ML+E + YV+ LQ
Sbjct: 1038 HVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQN 1097
Query: 236 QIEELT 241
Q+E L+
Sbjct: 1098 QVEFLS 1103
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 109 SSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVP-GGVSNLVDMDMEK 167
SS+ V N + RA N + P + +K E + G SN+ + +
Sbjct: 56 SSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS 115
Query: 168 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAV 227
++ VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E +
Sbjct: 116 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 175
Query: 228 EYVKFLQKQIEELT 241
YV+ LQ+Q+E L+
Sbjct: 176 NYVQSLQQQVEFLS 189
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + Y++ LQ
Sbjct: 46 IHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQ 105
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 106 QQVEFLS 112
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
+D VRA+RG AT SIAERVRR +I++R++ LQD+VP K A ML+E + Y
Sbjct: 142 KDREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINY 201
Query: 230 VKFLQKQIEELT 241
V+ LQ Q+E L+
Sbjct: 202 VQSLQNQVEFLS 213
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 109 SSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVP-GGVSNLVDMDMEK 167
SS+ V N + RA N + P + +K E + G SN+ + +
Sbjct: 72 SSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS 131
Query: 168 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAV 227
++ VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E +
Sbjct: 132 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 228 EYVKFLQKQIEELT 241
YV+ LQ+Q+E L+
Sbjct: 192 NYVQSLQQQVEFLS 205
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E + YV+ LQ+
Sbjct: 184 HVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQR 243
Query: 236 QIEELT 241
Q+E L+
Sbjct: 244 QVEFLS 249
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E + YV+ LQ
Sbjct: 183 IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQ 242
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 243 RQVEFLS 249
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQ LVP + T A MLEE + YVK LQ+Q
Sbjct: 150 VRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQ 209
Query: 237 IEELT 241
IE L+
Sbjct: 210 IEFLS 214
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 109 SSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVP-GGVSNLVDMDMEK 167
SS+ V N + RA N + P + +K E + G SN+ + +
Sbjct: 56 SSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNXETSS 115
Query: 168 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAV 227
++ VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E +
Sbjct: 116 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 175
Query: 228 EYVKFLQKQIEELT 241
YV+ LQ+Q+E L+
Sbjct: 176 NYVQSLQQQVEFLS 189
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ + +A RG A+ P+S+ R RR RI+DR++ LQ LVPN K + + MLE+AV YVK
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVK 185
Query: 232 FLQKQIEELT 241
FLQ QI+ L+
Sbjct: 186 FLQLQIKLLS 195
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS +++ LQDLVP +K T A ML+E + YV+ LQ+Q
Sbjct: 202 VRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRAGMLDEIINYVQSLQRQ 261
Query: 237 IEELT 241
+E L+
Sbjct: 262 VEFLS 266
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 109 SSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVP-GGVSNLVDMDMEK 167
SS+ V N + RA N + P + +K E + G SN+ + +
Sbjct: 72 SSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS 131
Query: 168 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAV 227
++ VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E +
Sbjct: 132 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 228 EYVKFLQKQIEELT 241
YV+ LQ+Q+E L+
Sbjct: 192 NYVQSLQQQVEFLS 205
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 109 SSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVP-GGVSNLVDMDMEK 167
SS+ V N + RA N + P + +K E + G SN+ + +
Sbjct: 72 SSFHMEPVKYNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS 131
Query: 168 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAV 227
++ VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E +
Sbjct: 132 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 228 EYVKFLQKQIEELT 241
YV+ LQ+Q+E L+
Sbjct: 192 NYVQSLQQQVEFLS 205
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I++R+R LQD+VP K A ML+E + YV+ LQ
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQ 205
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 206 NQVELLS 212
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R++ LQ+LVPN K + + MLEEAV YV FLQ
Sbjct: 271 KTRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVHYVNFLQL 329
Query: 236 QIEELT 241
QI+ L+
Sbjct: 330 QIKLLS 335
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 46/62 (74%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS+R++ LQDLVP K T A ML+E + YV+ LQ+Q
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 237 IE 238
+E
Sbjct: 61 VE 62
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEA +YVKFLQ QI
Sbjct: 197 RASRGGATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAAQYVKFLQLQI 255
Query: 238 EELT 241
+ L+
Sbjct: 256 KLLS 259
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 170 EDSVP-CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVE 228
E+ +P VRA+RG AT S+AER RR +I+ R++ LQ+LVP +K + TA +L+E +
Sbjct: 174 EEKLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIIN 233
Query: 229 YVKFLQKQIEELT 241
+V+FLQ+Q+E L+
Sbjct: 234 HVQFLQRQVEILS 246
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEA +YVKFLQ Q
Sbjct: 190 TRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAAQYVKFLQLQ 248
Query: 237 IEELT 241
I+ L+
Sbjct: 249 IKLLS 253
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRAKRG AT S+AERVRR +I++R++ LQDLVP K A ML+ ++YV+ LQ
Sbjct: 102 VHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQ 161
Query: 235 KQIEELT 241
QIE L+
Sbjct: 162 NQIEFLS 168
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Query: 166 EKLLEDSVPC--------RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQT 217
EK E+S P VRA+RG AT S+AER RR +IS+R++ LQDLVP +K
Sbjct: 138 EKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 197
Query: 218 NTADMLEEAVEYVKFLQKQIEELT 241
A +L+E + Y++ LQ+Q+E L+
Sbjct: 198 GKALVLDEIINYIQSLQRQVEFLS 221
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT+ S+AER RR +IS+R++ LQ LVP + T A MLEE + YVK LQ+Q
Sbjct: 19 VRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQ 78
Query: 237 IEELT 241
IE L+
Sbjct: 79 IEFLS 83
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRAKRG AT S+AERVRR +I++R++ LQDLVP K A ML+ ++YV+ LQ
Sbjct: 102 VHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQ 161
Query: 235 KQIEELT 241
QIE L+
Sbjct: 162 NQIEFLS 168
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 149 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 209 RQVEFLS 215
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 170 EDSVP---CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
ED P VRA+RG AT S+AERVRR +I++R+R LQD+VP K A ML+E
Sbjct: 137 EDEKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEI 196
Query: 227 VEYVKFLQKQIEELT 241
+ YV+ LQ Q+E L+
Sbjct: 197 INYVQSLQNQVEFLS 211
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 170 EDSVP---CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
ED P VRA+RG AT S+AERVRR +I++R+R LQD+VP K A ML+E
Sbjct: 146 EDGKPKDVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEI 205
Query: 227 VEYVKFLQKQIEELT 241
+ YV+ LQ Q+E L+
Sbjct: 206 INYVQSLQNQVEFLS 220
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQ 193
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 194 RQVEFLS 200
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A ML+E + YV+ LQ
Sbjct: 4 VHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQ 63
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 64 QQVEFLS 70
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R++ LQ +VPN K + + MLEEAV YVKFLQ
Sbjct: 269 KTRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTK-VDISTMLEEAVHYVKFLQL 327
Query: 236 QIE 238
QI+
Sbjct: 328 QIK 330
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Query: 166 EKLLEDSVPC--------RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQT 217
EK E+S P VRA+RG AT S+AER RR +IS+R++ LQDLVP +K
Sbjct: 123 EKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
Query: 218 NTADMLEEAVEYVKFLQKQIEELT 241
A +L+E + Y++ LQ+Q+E L+
Sbjct: 183 GKALVLDEIINYIQSLQRQVEFLS 206
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 169 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 228
Query: 237 IEELT 241
+E L+
Sbjct: 229 VEFLS 233
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQ 193
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 194 RQVEFLS 200
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT SIAERVRR +I R+R LQDLVP K A ML+E + YV LQ
Sbjct: 200 IHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIINYVHSLQ 259
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 260 NQVEFLS 266
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRAKRG AT S+AERVRR +I++++R LQDLVP K A ML+ + YV+ LQ
Sbjct: 138 IHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQ 197
Query: 235 KQIEELT 241
QIE L+
Sbjct: 198 NQIEFLS 204
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 149 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 209 RQVEFLS 215
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R+ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 129 IHVRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQ 188
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 189 RQVEFLS 195
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ +A +G AT P+S+ R RR RI DR+R LQ+LVPN K + + MLEEAV+YVKFLQ
Sbjct: 239 KTKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 297
Query: 236 QIEELT 241
Q + L+
Sbjct: 298 QNKLLS 303
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ R+ RG AT P+S+ R RR RI++R++ LQ+LVPN K + + MLEEAV+YVKFLQ
Sbjct: 223 KSRSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 281
Query: 236 QIEELT 241
QI+ L+
Sbjct: 282 QIKLLS 287
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 132 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQ 191
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 192 RQVEFLS 198
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRAKRG AT S+AERVRR +I++++R LQDLVP K A ML+ + YV+ LQ
Sbjct: 121 IHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQ 180
Query: 235 KQIEELT 241
QIE L+
Sbjct: 181 NQIEFLS 187
>gi|15242760|ref|NP_198306.1| SHI-related sequence 8 [Arabidopsis thaliana]
gi|332006506|gb|AED93889.1| SHI-related sequence 8 [Arabidopsis thaliana]
Length = 173
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 32/33 (96%)
Query: 161 VDMDMEKLLEDSVPCRVRAKRGCATHPRSIAER 193
+DM+MEK+ EDSVPCRVRAKRGCATHPRSIAER
Sbjct: 1 MDMNMEKIFEDSVPCRVRAKRGCATHPRSIAER 33
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQ LVP D+ T A +L+E + YV+ LQ
Sbjct: 143 IHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQ 202
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 203 NQVEFLS 209
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR RIS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 91 IHVRARRGQATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 150
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 151 QQVEFLS 157
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 144 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 203
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 204 RQVEFLS 210
>gi|357440299|ref|XP_003590427.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355479475|gb|AES60678.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 373
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
+E LL+ DSV +RAKRG A HPRS+A+RVRRTRI++R+RKLQ++V N+DK
Sbjct: 179 VENLLQFPDSVTSSIRAKRGFARHPRSLAKRVRRTRINERMRKLQEVVLNIDK 231
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RA++G A P+SIA R RR RISDR++ LQ+LVPN K + MLE+A+ YVKFLQ Q+
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTK-VDLVTMLEKAINYVKFLQLQV 417
Query: 238 E 238
+
Sbjct: 418 K 418
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRAKRG AT S+AERVRR +I++++R LQDLVP K A ML+ + YV+ LQ
Sbjct: 117 IHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQ 176
Query: 235 KQIEELT 241
QIE L+
Sbjct: 177 NQIEFLS 183
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 59 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 118
Query: 237 IEELT 241
+E L+
Sbjct: 119 VEFLS 123
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 136 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 195
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 196 RQVEFLS 202
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQD+VP +K T A +L+E + Y++ LQ
Sbjct: 139 IHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQ 198
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 199 RQVEFLS 205
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 93 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQ 152
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 153 RQVEFLS 159
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 149 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 209 RQVEFLS 215
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRAKRG A S+AERVRR +IS+++ LQ LVP DK T A ML+E + YV+ LQ
Sbjct: 155 IHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIISYVQSLQ 214
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 215 NQVEFLS 221
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+
Sbjct: 138 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 197
Query: 236 QIEELT 241
Q+E L+
Sbjct: 198 QVEFLS 203
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 144 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 203
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 204 RQVEFLS 210
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I++R+R LQD+VP K A ML+E + YV+ LQ
Sbjct: 155 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQ 214
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 215 NQVEFLS 221
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R R +RG AT P+S+ R RR +I++R+RKLQ L+PN K + ML+EAV YV+FL++
Sbjct: 446 RPRVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGK-VDIVTMLDEAVHYVQFLKR 504
Query: 236 QIEE 239
Q+ +
Sbjct: 505 QVTQ 508
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%)
Query: 156 GVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
G +N+ + + ++ VRA+RG AT S+AER RR +IS +++ LQD+VP +K
Sbjct: 120 GKTNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNK 179
Query: 216 QTNTADMLEEAVEYVKFLQKQIEELT 241
T A ML+E + YV+ LQ+Q+E L+
Sbjct: 180 VTGKAGMLDEIINYVQSLQQQVEFLS 205
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+ AT+ SIAE++RR +IS+R++ LQDLVP K T A ML+E + YV+ LQ
Sbjct: 146 VHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 205
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 206 RQVEFLS 212
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 126 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQ 185
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 186 HQVEFLS 192
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I+ +++ LQDLVP +K A ML+E + YV+ LQ
Sbjct: 66 VHVRARRGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQ 125
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 126 QQVEFLS 132
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 142 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 201
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 202 RQVEFLS 208
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 156 GVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
G SN+ + + ++ VRA+RG AT S+AER RR +IS +++ LQD+VP K
Sbjct: 120 GKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTK 179
Query: 216 QTNTADMLEEAVEYVKFLQKQIEELT 241
T A ML+E + YV+ LQ+Q+E L+
Sbjct: 180 VTGKAGMLDEIINYVQSLQQQVEFLS 205
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRAKRG AT S+AERVRR RI++++R LQDLVP K A ML+ + YV+ LQ
Sbjct: 119 IHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQ 178
Query: 235 KQIE-ELTEHQ 244
QIE +T H+
Sbjct: 179 NQIEVRITNHK 189
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
+R++RG AT+ S+AERVRR +IS+R++ LQDLVP +K T A +LE + YV+ LQ Q
Sbjct: 112 LRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQSLQSQ 171
Query: 237 IEELT 241
+E L+
Sbjct: 172 VEILS 176
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT P S+AERVRR +IS R++ LQ LVP DK T A +L+E + +V LQ
Sbjct: 162 VHVRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDEIIRHVLSLQ 221
Query: 235 KQIEEL 240
Q+E L
Sbjct: 222 NQVEFL 227
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +I +R++ LQDLVP +K T A M++E + YV+ LQ Q
Sbjct: 218 VRARRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQ 277
Query: 237 IEELT 241
+E L+
Sbjct: 278 VEFLS 282
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRAKRG AT S+AERVRR +I++R++ LQDLVP K A ML+ ++YV+ LQ Q
Sbjct: 47 VRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQ 106
Query: 237 IEELT 241
IE L+
Sbjct: 107 IEFLS 111
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 168 LLEDSVP---CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLE 224
++ED P VRAKRG AT S+AERVRR +I++++R LQ++VP K A ML+
Sbjct: 115 MIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLD 174
Query: 225 EAVEYVKFLQKQIEELT 241
E + YV+ LQ Q+E L+
Sbjct: 175 EIINYVQSLQHQVEFLS 191
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 237 IEELT 241
+E L+
Sbjct: 211 VEFLS 215
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 193
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 194 RQVEFLS 200
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 193
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 194 RQVEFLS 200
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA++G A P+SIA RVRR RIS+R++ LQ L+PN DK + MLE+A+ YV+ L+
Sbjct: 638 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAISYVQCLEF 696
Query: 236 QIEEL 240
QI+ L
Sbjct: 697 QIKML 701
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 193
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 194 RQVEFLS 200
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA++G A P+SIA RVRR RIS+R++ LQ L+PN DK + MLE+A+ YV+ L+
Sbjct: 753 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAITYVQCLEL 811
Query: 236 QIEEL 240
QI+ L
Sbjct: 812 QIKML 816
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT +AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 149 IHVRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 209 RQVEFLS 215
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I++R+R L+D+VP K A ML+E + YV+ LQ
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQ 205
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 206 NQVEFLS 212
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 169 LEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVE 228
+ D++ + +A R AT +S+ R RR RI++R+R LQ+LVPN K + + MLEEAVE
Sbjct: 202 VSDNLGGKAKADRRSATESQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVE 260
Query: 229 YVKFLQKQIEELT 241
YVKFLQ QI+ L+
Sbjct: 261 YVKFLQLQIKLLS 273
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 82 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 141
Query: 237 IEELT 241
+E L+
Sbjct: 142 VEFLS 146
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 72 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 131
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 132 RQVEFLS 138
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 130 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 189
Query: 237 IEELT 241
+E L+
Sbjct: 190 VEFLS 194
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 169 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 228
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 229 RQVEFLS 235
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ Q
Sbjct: 126 VRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQ 185
Query: 237 IEELT 241
+E L+
Sbjct: 186 VEFLS 190
>gi|357498241|ref|XP_003619409.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355494424|gb|AES75627.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 129
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
+E LL+ DSV +RAKRG A HPRS+A+RVRRTRI++R+RKLQ++V N+DK
Sbjct: 40 VENLLQFPDSVTSSIRAKRGFARHPRSLAKRVRRTRINERMRKLQEVVLNIDK 92
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS R+ LQ LVP DK T A +L+E + YV+ LQ
Sbjct: 136 IHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIINYVQSLQ 195
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 196 NQVEFLS 202
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ + ++ +G A+ P+S+ R RR RI+DR++ LQ LVPN K + + MLE+AV YVK
Sbjct: 128 SLKRKAKSNKGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVK 186
Query: 232 FLQKQIEELT 241
FLQ QI+ L+
Sbjct: 187 FLQLQIKLLS 196
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQD+VP +K A +L+E + Y++ LQ
Sbjct: 48 IHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQ 107
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 108 RQVEFLS 114
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +I++R+R LQD+VP K A ML+E + YV+ LQ Q
Sbjct: 73 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 132
Query: 237 IEELT 241
+E L+
Sbjct: 133 VEFLS 137
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 169 LEDSVP---CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEE 225
+ED P VRAKRG AT S+AERVRR +I++++R LQ++VP K A ML+E
Sbjct: 122 IEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDE 181
Query: 226 AVEYVKFLQKQIEELT 241
+ YV+ LQ Q+E L+
Sbjct: 182 IINYVQSLQHQVEFLS 197
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDL P +K A +L+E + Y++ LQ
Sbjct: 112 IHVRARRGQATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEIINYIQSLQ 171
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 172 RQVEFLS 178
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 237 IEELT 241
+E L+
Sbjct: 196 VEFLS 200
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R + G AT P+SIA R RR + +DRIR LQ LVPN ++ +T ML + EYV+FLQ ++
Sbjct: 676 RRRHGTATDPQSIAARTRREKFTDRIRILQSLVPNGER-LDTVHMLSQTFEYVRFLQHKV 734
Query: 238 EELTEHQ 244
+L ++
Sbjct: 735 WDLYNNK 741
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 171 DSVP-CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
D +P VRA+RG AT S+AER RR +I+ R++ LQ+LVP DK TA +L+E + +
Sbjct: 178 DKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINH 237
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 238 VQTLQRQVEMLS 249
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 131 IHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQ 190
Query: 235 KQIEELT 241
+Q E L+
Sbjct: 191 RQAEFLS 197
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 47/69 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 126 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQ 185
Query: 235 KQIEELTEH 243
Q+E + ++
Sbjct: 186 HQVEFMFKY 194
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQD+VP +K A +L+E + Y++ LQ
Sbjct: 121 IHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQ 180
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 181 RQVEFLS 187
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 37/173 (21%)
Query: 87 FQRQNSSPADLFDGYFSNYATPSSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLK 146
F N S ++++ +F TPS NKR SP+ + H+K
Sbjct: 11 FSSANPSLSEIWPSHFPTDHTPS-----------NKRHL--------SPSTDCGSNKHIK 51
Query: 147 V------EQSGQVPGGVSNLVDMDMEKLLEDSVP------------CRVRAKRGCATHPR 188
+Q+G + G + + KL E + VRA+RG AT
Sbjct: 52 SSGSGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSH 111
Query: 189 SIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
S+AER RR +IS+R++ LQD+VP +K A +L+E + Y++ LQ Q+E L+
Sbjct: 112 SLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLS 164
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA++G A P+SIA RVRR RIS+R++ LQ L+PN DK + MLE+A+ YV+ L+
Sbjct: 821 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAISYVQCLEF 879
Query: 236 QIEEL 240
QI+ L
Sbjct: 880 QIKML 884
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 237 IEELT 241
+E L+
Sbjct: 196 VEFLS 200
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
ED + VRA++G AT S+ ERVRR +IS+R++ LQ+LVP +K T A ML+E + Y
Sbjct: 127 EDYI--HVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIINY 184
Query: 230 VKFLQKQIE 238
V+ LQ+Q+E
Sbjct: 185 VQSLQRQVE 193
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ Q
Sbjct: 124 VRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQ 183
Query: 237 IEELT 241
+E L+
Sbjct: 184 VEFLS 188
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS +++ LQDLVP +K T A ML+E + YV+ LQ+Q
Sbjct: 37 VRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAGMLDEIINYVQSLQRQ 96
Query: 237 IEELT 241
+E ++
Sbjct: 97 VEFIS 101
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RA R T P+SI R RR RI++R++ LQ+LVPN K + + MLEEAV YVKFLQ QI
Sbjct: 227 RAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 285
Query: 238 EELT 241
L+
Sbjct: 286 RLLS 289
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ
Sbjct: 90 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQH 149
Query: 236 QIEELT 241
Q+E L+
Sbjct: 150 QVEFLS 155
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 171 DSVP-CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
D +P VRA+RG AT S+AER RR +I+ R++ LQ+LVP DK TA +L+E + +
Sbjct: 177 DKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINH 236
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 237 VQSLQRQVEMLS 248
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 128 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 187
Query: 237 IEELT 241
+E L+
Sbjct: 188 VEFLS 192
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQD+VP +K A +L+E + Y++ LQ
Sbjct: 135 IHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQ 194
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 195 RQVEFLS 201
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +I++R++ LQDLVP +K A +L+E + YV+ L+
Sbjct: 112 IHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALE 171
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 172 RQVEFLS 178
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 47 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 106
Query: 237 IEELT 241
+E L+
Sbjct: 107 VEFLS 111
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 37/172 (21%)
Query: 87 FQRQNSSPADLFDGYFSNYATPSSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLK 146
F N S ++++ +F TPS NKR SP+ + H+K
Sbjct: 11 FSSANPSLSEIWPSHFPTDHTPS-----------NKRHL--------SPSTDCGSNKHIK 51
Query: 147 V------EQSGQVPGGVSNLVDMDMEKLLEDSVP------------CRVRAKRGCATHPR 188
+Q+G + G + + KL E + VRA+RG AT
Sbjct: 52 SSGSGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSH 111
Query: 189 SIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
S+AER RR +IS+R++ LQD+VP +K A +L+E + Y++ LQ Q+E L
Sbjct: 112 SLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFL 163
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AER RR +IS+R++ LQ LVP DK +L+E + YVK LQ
Sbjct: 107 HVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSLQN 166
Query: 236 QIEELT 241
Q+E L
Sbjct: 167 QVEFLV 172
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +I+ R++ LQ+LVP DK TA +L+E + +V+ LQ
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 261
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 262 RQVEMLS 268
>gi|168057236|ref|XP_001780622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667988|gb|EDQ54605.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 835
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R + G AT P+SIA R RR + +DRIR LQ LVPN ++ +T ML + EYV+FLQ ++
Sbjct: 675 RRRHGTATDPQSIAARTRREKFTDRIRILQGLVPNGER-LDTVHMLSQTFEYVRFLQHKV 733
Query: 238 EELTEHQ 244
+L ++
Sbjct: 734 WDLYNNK 740
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +I+ R++ LQ+LVP DK TA +L+E + +V+ LQ
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 261
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 262 RQVEMLS 268
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA+RG AT P+S+ R RR +I++R++ LQ LVPN K + ML+EA+ YV+FLQ
Sbjct: 441 KPRARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAK-VDIVTMLDEAIHYVQFLQL 499
Query: 236 QIEEL 240
Q+ L
Sbjct: 500 QVTLL 504
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AER RR +IS+R++ LQ LVP DK +L+E + YVK LQ
Sbjct: 107 HVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQN 166
Query: 236 QIEELT 241
Q+E L
Sbjct: 167 QVEFLV 172
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDL+P +K A +L+E + Y++ LQ+Q
Sbjct: 140 VRARRGQATDRHSLAERARREKISERMKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQ 199
Query: 237 IEELT 241
+E L+
Sbjct: 200 VEFLS 204
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AER RR +IS+R++ LQ LVP DK +L+E + YVK LQ
Sbjct: 107 HVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQN 166
Query: 236 QIEELT 241
Q+E L
Sbjct: 167 QVEFLV 172
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +I+ R++ LQ+LVP DK TA +L+E + +V+ LQ
Sbjct: 198 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 257
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 258 RQVEMLS 264
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQ LVP DK +L+E + YVK LQ
Sbjct: 40 VHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQ 99
Query: 235 KQIEELT 241
Q+E L
Sbjct: 100 NQVEFLV 106
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL--TEHQ 244
P+S+A R+RR RIS++IR LQ LVP ++ +TA MLEEA+ YVKFL++QI L HQ
Sbjct: 114 PQSVAARLRRERISEKIRILQRLVPG-GRKMDTASMLEEAIRYVKFLKRQIRLLQPNHHQ 172
Query: 245 RRCKCSA 251
+ C+
Sbjct: 173 QHQPCTT 179
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA A P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV+YVKFLQ
Sbjct: 263 KSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 321
Query: 236 QIEELT 241
QI+ L+
Sbjct: 322 QIKLLS 327
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RA++G A P+SIA RVRR RIS+R++ LQ L+PN DK + MLE+A+ YV+ L+ QI
Sbjct: 49 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAITYVQCLELQI 107
Query: 238 EEL 240
+ L
Sbjct: 108 KML 110
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I++++R LQ++VP K A ML+E + YV+ LQ
Sbjct: 154 VHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQ 213
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 214 HQVEFLS 220
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I++++R LQ++VP K A ML+E + YV+ LQ
Sbjct: 153 VHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQ 212
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 213 HQVEFLS 219
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 170 EDSVP-CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVE 228
ED +P VRA+RG AT S+AER RR +I+ R++ LQ+LVP +K + TA +L+E +
Sbjct: 169 EDMLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIIN 228
Query: 229 YVKFLQKQIEELT 241
+V+ LQ Q+E L+
Sbjct: 229 HVQSLQCQVEFLS 241
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R+++G A P+SIA R RR RIS R++ LQDLVPN K + MLE+A+ YVKF+Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSK-VDLVTMLEKAINYVKFMQLQL 292
Query: 238 E 238
+
Sbjct: 293 Q 293
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R+++G A P+SIA R RR RIS R++ LQDLVPN K + MLE+A+ YVKF+Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSK-VDLVTMLEKAINYVKFMQLQL 292
Query: 238 E 238
+
Sbjct: 293 Q 293
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 171 DSVP-CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
D +P VRA+RG AT S+AER RR +I+ R++ LQ+LVP DK T +L+E + +
Sbjct: 178 DKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINH 237
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 238 VQTLQRQVEMLS 249
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ L
Sbjct: 110 IHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLH 169
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 170 HQVEFLS 176
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VR +RG AT S+AER RR +I+ R++ LQ+LVP DK + TA +L+E + +V+ LQ
Sbjct: 198 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQ 257
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 258 RQVEILS 264
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AERVRR +IS R++ LQ LVP DK T A +L+E + YV+FL+ +
Sbjct: 161 VRARRGEATDSHSLAERVRREKISSRMKLLQSLVPGCDKITGKALVLDEIISYVQFLKDR 220
Query: 237 IE 238
++
Sbjct: 221 VQ 222
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+ + YV+ LQ+
Sbjct: 98 HVRARRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDGIINYVQSLQR 157
Query: 236 QIEELT 241
Q+E L+
Sbjct: 158 QVEFLS 163
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+++A R+RR R+SDR+R LQ LVP +K +TA ML+EA Y+KFL+ Q+++L
Sbjct: 286 PQTVAARLRRERVSDRLRVLQKLVPGGNKM-DTASMLDEAASYLKFLKSQVQKL 338
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+++A R+RR R+SDR+R LQ LVP +K +TA ML+EA Y+KFL+ Q+++L
Sbjct: 285 PQTVAARLRRERVSDRLRVLQKLVPGGNKM-DTASMLDEAASYLKFLKSQVQKL 337
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +I++++R LQ++VP K A ML+E + YV+ LQ
Sbjct: 156 HVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQH 215
Query: 236 QIEELT 241
Q+E L+
Sbjct: 216 QVEFLS 221
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 43/66 (65%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT S+AE VR +I R++ LQDLVP K T DML+E + YV+ LQ
Sbjct: 10 RVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINYVQSLQC 69
Query: 236 QIEELT 241
Q E L+
Sbjct: 70 QAESLS 75
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VR +RG AT S+AER RR +I+ R++ LQ+LVP DK + TA +L+E + +V+ LQ
Sbjct: 204 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQ 263
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 264 RQVEILS 270
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+ G AT R++AERVRR +I++++R LQ++VP K A ML+E + YV+ LQ
Sbjct: 151 VNVRARSGQATDSRNLAERVRRGKINEKLRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQ 210
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 211 NQVEFLS 217
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS+R++ L+ LVP +K T A ML+E + YV+ LQ
Sbjct: 150 VRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLDEIINYVQSLQ 207
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ R+ R AT P+S+ + RR RI+ R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 203 KTRSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTK-VDISTMLEEAVRYVKFLQL 261
Query: 236 QIEELT 241
QI+ L+
Sbjct: 262 QIKLLS 267
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +I+ R++ LQ+LVP +K + TA +L+E + +V+ LQ
Sbjct: 195 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSLQ 254
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 255 RQVEFLS 261
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 14/80 (17%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK--------------QTNTAD 221
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A
Sbjct: 144 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAV 203
Query: 222 MLEEAVEYVKFLQKQIEELT 241
ML+E + YV+ LQ+Q+E L+
Sbjct: 204 MLDEIINYVQSLQRQVEFLS 223
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RA+RG AT ++AERVRR +I++++R LQ++VP K + A ML+E + YV+ LQ Q+
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 238 EELT 241
E L+
Sbjct: 212 EFLS 215
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I+++++ LQ++VP K A ML+E + YV+ LQ
Sbjct: 150 VHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQ 209
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 210 HQVEFLS 216
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 153 VPGGVSNLVDMDMEK-LLEDSVP-----CRVRAKRG---CATHPRSIAERVRRTRISDRI 203
+PG +N+ + L +VP ++R KR + P+S+A R RR RISDR+
Sbjct: 349 LPGSAANVAPLLFSTPLTLPNVPSMEEIVQLRPKRRNVRISKDPQSVAARHRRERISDRV 408
Query: 204 RKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
R LQ VP K +TA ML+EA+ YVKFLQ+Q++ L
Sbjct: 409 RVLQHFVPGGTKM-DTASMLDEAIHYVKFLQQQLQTL 444
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R+ LQDLVP +K A +L+E + Y++ LQ Q
Sbjct: 84 VRARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQ 143
Query: 237 IEELT 241
+E L+
Sbjct: 144 VEFLS 148
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +I+ R++ LQ+LVP +K + TA +L+E + +V+ LQ
Sbjct: 199 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQ 258
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 259 RQVEFLS 265
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 14/79 (17%)
Query: 176 RVRAKRGCATHPRSIAERV-------------RRTRISDRIRKLQDLVPNMDKQTNTADM 222
+ RA RG AT P+S+ R+ RR RI++R+R LQ LVPN K + + M
Sbjct: 236 KTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTK-VDISTM 294
Query: 223 LEEAVEYVKFLQKQIEELT 241
LEEAV+YVKFLQ QI+ L+
Sbjct: 295 LEEAVQYVKFLQLQIKLLS 313
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP+++K T+ A ML+E V+YVKFL+
Sbjct: 153 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 211
Query: 236 QIEELT 241
Q++ L+
Sbjct: 212 QVKVLS 217
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+++A R+RR R+SDR+R LQ LVP K +TA ML+EA Y+KFL+ Q++ L
Sbjct: 288 PQTVAARLRRERVSDRLRVLQKLVPGGSKM-DTASMLDEAASYLKFLRSQVQAL 340
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R +KR A +++ER RR RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K L
Sbjct: 11 PARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKML 69
Query: 234 QKQIEELT 241
Q Q++ L+
Sbjct: 70 QLQLQVLS 77
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP+++K T+ A ML+E V+YVKFL+
Sbjct: 134 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 192
Query: 236 QIEELT 241
Q++ L+
Sbjct: 193 QVKVLS 198
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS+R+R LQ LVP K +TA ML+EA+ Y+KFL++Q++EL
Sbjct: 163 PQSVAARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 215
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS+R+R LQ LVP K +TA ML+EA+ Y+KFL++Q++EL
Sbjct: 162 PQSVAARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 214
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Query: 164 DMEKLLEDSVPCRVRA--KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
D+E+ E+ VP R A KR AT +++ER RR RI+ ++R LQDL+PN +K + A
Sbjct: 356 DLEE--EEQVPARGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNK-VDKAS 412
Query: 222 MLEEAVEYVKFLQKQIEELTEHQRRC 247
ML EA++Y+K LQ Q++ ++ R C
Sbjct: 413 MLGEAIDYLKSLQLQVQMMSMGTRLC 438
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+++ LQD++P +K A +L+E + Y++ LQ
Sbjct: 152 IHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQ 211
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 212 RQVEFLS 218
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP+++K T+ A ML+E V+YVKFL+
Sbjct: 119 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 177
Query: 236 QIEELT 241
Q++ L+
Sbjct: 178 QVKVLS 183
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP+++K T+ A ML+E V+YVKFL+
Sbjct: 122 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 180
Query: 236 QIEELT 241
Q++ L+
Sbjct: 181 QVKVLS 186
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R +KR A +++ER RR RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K L
Sbjct: 11 PARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKML 69
Query: 234 QKQIEELT 241
Q Q++ L+
Sbjct: 70 QLQLQVLS 77
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Query: 164 DMEKLLEDSVPCRVRA--KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
D+E+ E+ VP R A KR AT +++ER RR RI+ ++R LQDL+PN +K + A
Sbjct: 362 DLEE--EEQVPARGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNK-VDKAS 418
Query: 222 MLEEAVEYVKFLQKQIEELTEHQRRC 247
ML EA++Y+K LQ Q++ ++ R C
Sbjct: 419 MLGEAIDYLKSLQLQVQMMSMGTRLC 444
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+++ LQD++P +K A +L+E + Y++ LQ
Sbjct: 151 IHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQ 210
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 211 RQVEFLS 217
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS+R+R LQ LVP K +TA ML+EA+ Y+KFL++Q++EL
Sbjct: 163 PQSVAARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 215
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP+++K T+ A ML+E V+YVKFL+
Sbjct: 129 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 187
Query: 236 QIEELT 241
Q++ L+
Sbjct: 188 QVKVLS 193
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
+ P+S+A R RR +IS+RIR L+ L+P +K +TA ML+EA+EYVKFLQ Q++ L
Sbjct: 385 ATSVEPQSVAARHRRKKISERIRVLEKLIPGGNKM-DTATMLDEAIEYVKFLQLQVQIL 442
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP+++K T+ A ML+E V+YVKFL+
Sbjct: 129 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 187
Query: 236 QIEELT 241
Q++ L+
Sbjct: 188 QVKVLS 193
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP+++K T+ A ML+E V+YVKFL+
Sbjct: 122 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAVMLDEIVDYVKFLRL 180
Query: 236 QIEELT 241
Q++ L+
Sbjct: 181 QVKVLS 186
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTE 242
P+S+A R RR RISDRIR LQ LVP K +TA ML+EA+ YVKFL+ Q++ L +
Sbjct: 442 PQSVAARHRRERISDRIRVLQRLVPGGTKM-DTASMLDEAIHYVKFLKLQLQTLEQ 496
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 165 MEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLE 224
+E++ + P R +KR A +++E+ RR+RI+++++ LQ+L+PN +K T+ A ML+
Sbjct: 121 VEEVATKAAPLRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLD 179
Query: 225 EAVEYVKFLQKQIEELT 241
EA+EY+K LQ Q++ L+
Sbjct: 180 EAIEYLKQLQLQVQMLS 196
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
G A P+SIA + RR RIS+R++ LQDLVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 232 GPAKDPQSIAAKNRRERISERLKMLQDLVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 289
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP+++K T+ A ML+E V+YVKFL+
Sbjct: 136 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 194
Query: 236 QIEELT 241
Q++ L+
Sbjct: 195 QVKVLS 200
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP+++K T+ A ML+E V+YVKFL+
Sbjct: 126 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 184
Query: 236 QIEELT 241
Q++ L+
Sbjct: 185 QVKVLS 190
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRR 246
P+++A R RR RIS+R+R LQ LVP K +TA ML+EA Y++FLQ Q+ EL RR
Sbjct: 324 PQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAASYLRFLQSQVRELQTLDRR 382
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VR++RG AT S+AER RR RI +R++ LQDLVP +K A L+E + Y++ LQ
Sbjct: 141 IHVRSRRGQATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQ 200
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 201 CQVEFLS 207
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
+ P + + K A P+SIA + RR RIS+R++ LQ+LVPN K + MLE+A+ YVK
Sbjct: 176 AAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVK 234
Query: 232 FLQKQIEEL 240
FLQ Q++ L
Sbjct: 235 FLQLQVKIL 243
>gi|414886018|tpg|DAA62032.1| TPA: putative HLH DNA-binding domain superfamily protein, partial
[Zea mays]
Length = 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Query: 112 DYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMD-MEKLLE 170
D SP S + D+ P A L + SG+ GG + +M +EK L+
Sbjct: 263 DEASPSPTSGAKRPRDSGPALQQPLAP-----QLSLP-SGKNKGGRAASAEMAAIEKFLQ 316
Query: 171 --DSVPCRVRAKRGCATHPRSIAERVR--RTRISDRIRKLQDLVPNMDKQTN 218
D+VPC++RAKRGCATHPRSIAERVR R RI +L L+P+ ++ N
Sbjct: 317 FQDAVPCKIRAKRGCATHPRSIAERVRCIPARCYSRIPRLV-LIPSPIQKEN 367
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VR +RG AT S+AER RR +I+ R++ LQ+LVP +K + TA +L+E + +V+ LQ
Sbjct: 171 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQ 230
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 231 RQVEILS 237
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA AT +SI R RR RI++R+R LQ LVPN K + + MLEEAV+YVKFLQ
Sbjct: 195 KSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQL 253
Query: 236 QIEELT 241
QI+ L+
Sbjct: 254 QIKLLS 259
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+++A R+RR R+SDR+R LQ LVP K +TA ML+EA Y+KFL+ Q++ L
Sbjct: 285 PQTVAARLRRERVSDRLRVLQKLVPGGSKM-DTASMLDEAASYLKFLKSQVQAL 337
>gi|42571193|ref|NP_973670.1| transcription factor bHLH130 [Arabidopsis thaliana]
gi|330255006|gb|AEC10100.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 300
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
Query: 144 HLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERV 194
HL + +S S++V +D L+DSVPC++RAKRGCATHPRSIAERV
Sbjct: 249 HLSLPKSSST---ASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERV 296
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVK
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 232 FLQKQIEELT 241
FL+ Q++ L+
Sbjct: 200 FLRLQVKVLS 209
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVK
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 232 FLQKQIEELT 241
FL+ Q++ L+
Sbjct: 200 FLRLQVKVLS 209
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK-----QTNTADMLEEAVEY 229
VRA+RG AT SIAERVRR +I R+R LQDLVP K A ML+E + Y
Sbjct: 146 IHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVMLDEIINY 205
Query: 230 VKFLQKQIEELT 241
V LQ Q+E L+
Sbjct: 206 VHSLQNQVEFLS 217
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 181 RGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
R T P+S+ R RR RI++R++ LQ+LVPN K + + MLEEAV+YVKFLQ QI+ L
Sbjct: 222 RQSTTDPQSLYARKRRERINERLKVLQNLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLL 280
Query: 241 T 241
+
Sbjct: 281 S 281
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP+++K T+ A ML+E V+YVKFL+
Sbjct: 137 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 195
Query: 236 QIEELT 241
Q++ L+
Sbjct: 196 QVKILS 201
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVK
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 232 FLQKQIEELT 241
FL+ Q++ L+
Sbjct: 200 FLRLQVKVLS 209
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+SIA R+RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL++QI L
Sbjct: 119 PQSIAARLRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
>gi|227016419|gb|ACP18671.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE----E 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+
Sbjct: 54 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVSLHQAA 112
Query: 240 LTEHQRRC 247
L +H+ C
Sbjct: 113 LVQHEEGC 120
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVK
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 232 FLQKQIEELT 241
FL+ Q++ L+
Sbjct: 200 FLRLQVKVLS 209
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 170 EDSVPC--RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAV 227
ED P VRA+RG AT S+AER RR +I+ R+ L++LVP K + TA +L+E +
Sbjct: 71 EDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEII 130
Query: 228 EYVKFLQKQIEELT 241
+V+ LQ+Q+E L+
Sbjct: 131 NHVQSLQRQVEYLS 144
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVK
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 232 FLQKQIEELT 241
FL+ Q++ L+
Sbjct: 200 FLRLQVKVLS 209
>gi|227016421|gb|ACP18672.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE----E 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+
Sbjct: 54 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVSLHQAA 112
Query: 240 LTEHQRRC 247
L +H+ C
Sbjct: 113 LVQHEEGC 120
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
+ S+ RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP + K T+ A M++E V+Y
Sbjct: 143 QSSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSK-TDRAAMIDEIVDY 201
Query: 230 VKFLQKQIEELT 241
VKFL+ Q++ L+
Sbjct: 202 VKFLRLQVKVLS 213
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +I+ R+ L++LVP K + TA +L+E + +V+ LQ
Sbjct: 178 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 237
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 238 RQVEYLS 244
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 170 EDSVPC--RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAV 227
ED P VRA+RG AT S+AER RR +I+ R+ L++LVP K + TA +L+E +
Sbjct: 148 EDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEII 207
Query: 228 EYVKFLQKQIEELT 241
+V+ LQ+Q+E L+
Sbjct: 208 NHVQSLQRQVEYLS 221
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS+R+R LQ LVP K +TA ML+EA+ YVKFL+KQ++ L
Sbjct: 167 PQSVAARHRRERISERMRILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQSL 219
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +I+ R+ L++LVP K + TA +L+E + +V+ LQ
Sbjct: 105 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 164
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 165 RQVEYLS 171
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 21/152 (13%)
Query: 90 QNSSPADLFDGYFSNYATPSSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQ 149
+NSSPA+LF G + SS +Y D K + E + L+ S K +
Sbjct: 52 ENSSPAELFFGGGGS----SSLNYSDQGGYFAKESAERRGVSMENDLGDLSCDSE-KGAE 106
Query: 150 SGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDL 209
+VP ++V R +KR A +++E+ RR+RI+++++ LQ+L
Sbjct: 107 VAEVPS---------------ETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNL 151
Query: 210 VPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
+PN +K T+ A ML+EA+EY+K LQ Q++ LT
Sbjct: 152 IPNSNK-TDKASMLDEAIEYLKQLQLQVQMLT 182
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 186 HPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+S A +VRR RIS+R++ LQDLVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 208 QPQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLA 262
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ R G A+ P+ + + RR RI++R++ LQ LVPN K + + MLEEAV+YVKFLQ
Sbjct: 237 KSRCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTK-VDISTMLEEAVQYVKFLQV 295
Query: 236 QIEELT 241
QI+ L+
Sbjct: 296 QIKLLS 301
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 186 HPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+S A +VRR RIS+R++ LQDLVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 207 QPQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLA 261
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +I+ R+ L++LVP K + TA +L+E + +V+ LQ
Sbjct: 191 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 250
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 251 RQVEYLS 257
>gi|162459126|ref|NP_001105271.1| barren stalk1 [Zea mays]
gi|56384213|gb|AAV85767.1| barren stalk1 [Zea mays]
gi|56384215|gb|AAV85768.1| barren stalk1 [Zea mays]
gi|223946525|gb|ACN27346.1| unknown [Zea mays]
gi|414879869|tpg|DAA57000.1| TPA: barren stalk1 [Zea mays]
Length = 219
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE----E 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ QI
Sbjct: 53 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKTQISLHQAA 111
Query: 240 LTEHQRRCK 248
L +H+ C
Sbjct: 112 LMQHEEGCH 120
>gi|227016424|gb|ACP18673.1| barren stalk1-like protein [Leymus triticoides]
Length = 158
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE----E 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+
Sbjct: 53 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVSLHQAA 111
Query: 240 LTEHQRRC 247
L +H+ C
Sbjct: 112 LVQHEEGC 119
>gi|242059137|ref|XP_002458714.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
gi|241930689|gb|EES03834.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
Length = 232
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE----E 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ QI
Sbjct: 58 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQISLHQAA 116
Query: 240 LTEHQRRCK 248
L +H+ C
Sbjct: 117 LMQHEEGCH 125
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVKFL+
Sbjct: 147 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRL 205
Query: 236 QIEELT 241
Q++ L+
Sbjct: 206 QVKVLS 211
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R R KR A +++E+ RR+RI+++++ LQ L+PN K T+ A ML++A+EY+K L
Sbjct: 36 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHL 94
Query: 234 QKQIEELT 241
Q Q++ L+
Sbjct: 95 QLQVQMLS 102
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Query: 165 MEKLLED----SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTA 220
+E L+E+ + P R +KR A +++E+ RR+RI+++++ LQ+L+PN +K T+ A
Sbjct: 139 LEALIEEVQTKAAPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKA 197
Query: 221 DMLEEAVEYVKFLQKQIEELT 241
ML+EA+EY+K LQ Q++ L+
Sbjct: 198 SMLDEAIEYLKQLQLQVQMLS 218
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVK
Sbjct: 78 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 136
Query: 232 FLQKQIEELT 241
FL+ Q++ L+
Sbjct: 137 FLRLQVKVLS 146
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R R KR A +++E+ RR+RI+++++ LQ L+PN K T+ A ML++A+EY+K L
Sbjct: 38 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHL 96
Query: 234 QKQIEELT 241
Q Q++ L+
Sbjct: 97 QLQVQMLS 104
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R R KR A +++E+ RR+RI+++++ LQ L+PN K T+ A ML++A+EY+K L
Sbjct: 36 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHL 94
Query: 234 QKQIEELT 241
Q Q++ L+
Sbjct: 95 QLQVQMLS 102
>gi|115440839|ref|NP_001044699.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|68565366|sp|Q7XAQ6.1|LAX_ORYSJ RecName: Full=Transcription factor LAX PANICLE
gi|33342172|dbj|BAC80247.1| transcription factor [Oryza sativa Japonica Group]
gi|56785174|dbj|BAD81850.1| transcription factor [Oryza sativa Japonica Group]
gi|113534230|dbj|BAF06613.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|342674132|gb|AEL31274.1| LAX protein [Oryza sativa Japonica Group]
Length = 215
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI----EE 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+
Sbjct: 41 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVTLHQAA 99
Query: 240 LTEHQRRCK 248
L +H+ C+
Sbjct: 100 LVQHEEGCQ 108
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 183 CATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTE 242
++ P+++A R RR RIS+R+R LQ LVP K +TA ML+EA Y++FL+ QI EL
Sbjct: 370 ISSDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQIRELQT 428
Query: 243 HQRR 246
RR
Sbjct: 429 LDRR 432
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+ R RR RIS+R+R LQ LVP K +TA ML+EA+ Y+KFL++Q++EL
Sbjct: 163 PQSVVARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 215
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+++A R+RR R+S+R+R LQ LVP K +TA ML+EA Y+KFL+ Q++ L
Sbjct: 295 PQTVAARLRRERVSERLRVLQKLVPGGSKM-DTASMLDEAASYLKFLKSQVQAL 347
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+++A R+RR R+S+R+R LQ LVP K +TA ML+EA Y+KFL+ Q++ L
Sbjct: 296 PQTVAARLRRERVSERLRVLQKLVPGGSKM-DTASMLDEAASYLKFLKSQVQAL 348
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 183 CATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTE 242
++ P+++A R RR RIS+R+R LQ LVP K +TA ML+EA Y++FL+ QI EL
Sbjct: 366 ISSDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQIRELQT 424
Query: 243 HQRR 246
RR
Sbjct: 425 LDRR 428
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 183 CATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTE 242
++ P+++A R RR RIS+R+R LQ LVP K +TA ML+EA Y++FL+ QI EL
Sbjct: 382 ISSDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQIRELQT 440
Query: 243 HQRR 246
RR
Sbjct: 441 LDRR 444
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
G AT P+S+ R RR +I++R++ LQ+LVPN K + ML+EA+ YVKFLQ Q+E L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAK-VDIVTMLDEAIHYVKFLQTQVELL 58
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 186 HPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+S A +VRR RIS+R++ LQDLVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 201 QPQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLA 255
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVKFL+
Sbjct: 138 RVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRL 196
Query: 236 QIEELT 241
Q++ L+
Sbjct: 197 QVKVLS 202
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 55/79 (69%), Gaps = 4/79 (5%)
Query: 165 MEKLLEDSVPC---RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
+EK +E S P R +KR A +++E+ RR+RI+++++ LQ+L+PN +K T+ A
Sbjct: 104 VEKSVEASKPVPPPRSSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKAS 162
Query: 222 MLEEAVEYVKFLQKQIEEL 240
ML+EA+EY+K LQ Q++ L
Sbjct: 163 MLDEAIEYLKQLQLQVQYL 181
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVKFL+
Sbjct: 143 RVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRL 201
Query: 236 QIEELT 241
Q++ L+
Sbjct: 202 QVKVLS 207
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
V+A+RG A + S+AERVRR +IS+R++ LQ LVP + T +L+E + YV+ LQ+
Sbjct: 204 HVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQ 263
Query: 236 QIEELT 241
Q+E L+
Sbjct: 264 QVEFLS 269
>gi|62466521|gb|AAX83586.1| LAX [Oryza rufipogon]
Length = 190
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI----EE 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+
Sbjct: 25 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVTLHQAA 83
Query: 240 LTEHQRRCK 248
L +H+ C+
Sbjct: 84 LVQHEEGCQ 92
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
V+A+RG A + S+AERVRR +IS+R++ LQ LVP + T +L+E + YV+ LQ+
Sbjct: 204 HVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQ 263
Query: 236 QIEELT 241
Q+E L+
Sbjct: 264 QVELLS 269
>gi|227016415|gb|ACP18669.1| barren stalk1-like protein [Leymus cinereus]
Length = 149
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE----E 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+
Sbjct: 54 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVSLHQAA 112
Query: 240 LTEHQRRC 247
L +H+ C
Sbjct: 113 LVQHEEGC 120
>gi|212721432|ref|NP_001131577.1| uncharacterized protein LOC100192921 [Zea mays]
gi|194691908|gb|ACF80038.1| unknown [Zea mays]
gi|414881478|tpg|DAA58609.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|414881479|tpg|DAA58610.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 427
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRR 246
P+++A R RR RISDR+R LQ LVP K +TA ML+EA Y++FL+ Q+ +L RR
Sbjct: 322 PQTVAARQRRERISDRLRVLQKLVPGGAKM-DTASMLDEAASYLRFLKSQVRDLQTLDRR 380
>gi|62466473|gb|AAX83562.1| LAX [Oryza barthii]
gi|62466475|gb|AAX83563.1| LAX [Oryza meridionalis]
gi|62466477|gb|AAX83564.1| LAX [Oryza longistaminata]
gi|62466479|gb|AAX83565.1| LAX [Oryza glumipatula]
gi|62466481|gb|AAX83566.1| LAX [Oryza nivara]
gi|62466483|gb|AAX83567.1| LAX [Oryza rufipogon]
gi|62466485|gb|AAX83568.1| LAX [Oryza sativa Japonica Group]
gi|62466487|gb|AAX83569.1| LAX [Oryza sativa Japonica Group]
gi|62466489|gb|AAX83570.1| LAX [Oryza sativa Japonica Group]
gi|62466493|gb|AAX83572.1| LAX [Oryza sativa Japonica Group]
gi|62466495|gb|AAX83573.1| LAX [Oryza sativa Indica Group]
gi|62466497|gb|AAX83574.1| LAX [Oryza sativa Indica Group]
gi|62466501|gb|AAX83576.1| LAX [Oryza sativa Indica Group]
gi|62466511|gb|AAX83581.1| LAX [Oryza sativa Indica Group]
gi|62466517|gb|AAX83584.1| LAX [Oryza rufipogon]
Length = 189
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI----EE 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+
Sbjct: 25 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVTLHQAA 83
Query: 240 LTEHQRRCK 248
L +H+ C+
Sbjct: 84 LVQHEEGCQ 92
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +I+ R+ L++LVP K + TA +L+E + +V+ LQ
Sbjct: 144 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 203
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 204 RQVEYLS 210
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS+RI+ LQ LVP K +TA ML+EA+ YVKFL+KQ++ L
Sbjct: 140 PQSVAARHRRERISERIKILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQTL 192
>gi|62466491|gb|AAX83571.1| LAX [Oryza sativa Japonica Group]
gi|62466499|gb|AAX83575.1| LAX [Oryza sativa Indica Group]
gi|62466503|gb|AAX83577.1| LAX [Oryza sativa Indica Group]
gi|62466505|gb|AAX83578.1| LAX [Oryza sativa Indica Group]
gi|62466507|gb|AAX83579.1| LAX [Oryza sativa Indica Group]
gi|62466509|gb|AAX83580.1| LAX [Oryza sativa Indica Group]
gi|62466513|gb|AAX83582.1| LAX [Oryza rufipogon]
gi|62466515|gb|AAX83583.1| LAX [Oryza rufipogon]
Length = 189
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI----EE 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+
Sbjct: 25 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVTLHQAA 83
Query: 240 LTEHQRRCK 248
L +H+ C+
Sbjct: 84 LVQHEEGCQ 92
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG A S+AERVRR +IS +++ LQ LVP DK T +L+ + Y+ LQ Q
Sbjct: 136 VRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSLQDQ 195
Query: 237 IEELTE 242
++ L E
Sbjct: 196 VKSLME 201
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +I+ R++ L++LVP DK TA +L+E + +V+ LQ+Q
Sbjct: 33 VRARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGTALVLDEIINHVQSLQRQ 92
Query: 237 IEELT 241
+E L+
Sbjct: 93 VEMLS 97
>gi|414881477|tpg|DAA58608.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 481
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R R R ++ P+++A R RR RISDR+R LQ LVP K +TA ML+EA Y++FL
Sbjct: 364 PPRRRNVR-ISSDPQTVAARQRRERISDRLRVLQKLVPGGAKM-DTASMLDEAASYLRFL 421
Query: 234 QKQIEELTEHQRR 246
+ Q+ +L RR
Sbjct: 422 KSQVRDLQTLDRR 434
>gi|62466523|gb|AAX83587.1| LAX [Oryza rufipogon]
Length = 189
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI----EE 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+
Sbjct: 25 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVTLHQAA 83
Query: 240 LTEHQRRCK 248
L +H+ C+
Sbjct: 84 LVQHEEGCQ 92
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
AT P+S+ R RR RI++R++ LQ+LVPN K + + MLEEA+ YVKFLQ QI+ L+
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQLQIKLLS 284
>gi|62466519|gb|AAX83585.1| LAX [Oryza rufipogon]
Length = 189
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI----EE 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+
Sbjct: 25 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVTLHQAA 83
Query: 240 LTEHQRRCK 248
L +H+ C+
Sbjct: 84 LVQHEEGCQ 92
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A + RR RIS+R+R LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 217 PQSLAAKNRRERISERLRTLQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVL 269
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 183 CATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTE 242
++ P+++A R RR RIS+R+R LQ LVP K +TA ML+EA Y++FL+ QI EL
Sbjct: 370 ISSDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQIRELQT 428
Query: 243 HQRR 246
RR
Sbjct: 429 LDRR 432
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL++QI +L
Sbjct: 98 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRQL 150
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
G AT P+S+ R RR +I++R++ LQ+LVPN K + ML+EA+ YVKFLQ Q+E L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAK-VDIVTMLDEAIHYVKFLQNQVELL 58
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
AT P+S+ R RR RI++R++ LQ+LVPN K + + MLEEA+ YVKFLQ QI+ L+
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQLQIKLLS 284
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +I+ R++ LQ+LVP K + TA +L+E + +V+ LQ++
Sbjct: 7 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSLQRE 66
Query: 237 IEELT 241
+E L+
Sbjct: 67 VEFLS 71
>gi|357506069|ref|XP_003623323.1| LAX [Medicago truncatula]
gi|355498338|gb|AES79541.1| LAX [Medicago truncatula]
Length = 153
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
+T P+S+A R RR RISDR + LQ ++P K +T MLEEA+ YVKFL+KQI
Sbjct: 33 STDPQSVAARERRHRISDRFKILQSMIPGGSK-LDTVSMLEEAIHYVKFLKKQI 85
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL++QI +L
Sbjct: 35 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRQL 87
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
+ P+S+A R RR +IS+RIR L+ L+P +K +TA ML+EA+EYVKFLQ Q++ L
Sbjct: 13 ATSVEPQSVAARHRRKKISERIRVLEKLIPGGNK-MDTATMLDEAIEYVKFLQLQVQIL 70
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEH 243
++ P+++A R RR RIS+R+R LQ LVP K +TA ML+EA Y++FL+ Q+ EL
Sbjct: 354 SSDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQVRELQTL 412
Query: 244 QRR 246
RR
Sbjct: 413 DRR 415
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 183 CATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
+T P+S+A R RR RISDR + LQ LVP K +T MLEEA+ YVKFL+ QI
Sbjct: 37 LSTDPQSVAARERRHRISDRFKILQSLVPGGTKM-DTVSMLEEAINYVKFLKNQI 90
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 188 RSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTE 242
+S+A R RR RISDRIR LQ LVP K +TA ML+EA+ Y+KFL++Q++ L +
Sbjct: 374 QSVAARHRRERISDRIRVLQRLVPGGTKM-DTASMLDEAIHYIKFLKQQLQTLEQ 427
>gi|125528258|gb|EAY76372.1| hypothetical protein OsI_04303 [Oryza sativa Indica Group]
Length = 223
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI----EE 239
+T P+S+A R RR RISDR R L+ LVP K T MLE+A+ YVKFL+ Q+
Sbjct: 49 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-METVSMLEQAIHYVKFLKAQVTLHQAA 107
Query: 240 LTEHQRRCK 248
L +H+ C+
Sbjct: 108 LVQHEEGCQ 116
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 173 VPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKF 232
P R KR A +++E+ RR+RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K
Sbjct: 174 APSRSSTKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQ 232
Query: 233 LQKQIEELT 241
LQ Q++ L+
Sbjct: 233 LQLQVQMLS 241
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 174 PCRVRA----KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
P RA KRG A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEY 366
Query: 230 VKFLQKQIEELT 241
+K LQ Q++ ++
Sbjct: 367 LKTLQLQVQIMS 378
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 174 PCRVRA----KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
P RA KRG A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEY 366
Query: 230 VKFLQKQIEELT 241
+K LQ Q++ ++
Sbjct: 367 LKTLQLQVQIMS 378
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+SIA R RR +IS+R+R+L+ LVP +K +TA ML+EA+ +VKFLQ Q++ L
Sbjct: 388 PQSIAARQRRKKISERVRELEKLVPGGNK-LDTASMLDEAIRFVKFLQIQVQLL 440
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+++A R+RR R+S+R+R LQ LVP K +TA ML+EA Y+KFL+ Q+E L
Sbjct: 305 PQTVAARLRRERVSERLRVLQRLVPGGSKM-DTATMLDEAASYLKFLKSQLEAL 357
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 186 HPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+S A +VRR RIS+R++ LQDLVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 223 QPQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLA 277
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+++A R+RR R+S+R+R LQ LVP K +TA ML+EA Y+KFL+ Q+E L
Sbjct: 307 PQTVAARLRRERVSERLRVLQRLVPGGSKM-DTATMLDEAASYLKFLKSQLEAL 359
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+++A R+RR R+S+R+R LQ LVP K +TA ML+EA Y+KFL+ Q+E L
Sbjct: 235 PQTVAARLRRERVSERLRVLQRLVPGGSKM-DTATMLDEAASYLKFLKSQLEAL 287
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL+ Q++ L
Sbjct: 155 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSL 207
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 174 PCRVRA----KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
P RA KRG A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEY 366
Query: 230 VKFLQKQIEELT 241
+K LQ Q++ ++
Sbjct: 367 LKTLQLQVQIMS 378
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 174 PCRVRA----KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
P RA KRG A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEY 366
Query: 230 VKFLQKQIEELT 241
+K LQ Q++ ++
Sbjct: 367 LKTLQLQVQIMS 378
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL++QI L
Sbjct: 135 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKRQIRLL 187
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 23/180 (12%)
Query: 76 SLSQSQLDQVGFQRQNSSPADLFDGYFS---NYATPSSYDYVDVSPNSNKRAREDNNTQF 132
++SQS DQ+ +R+N+ +D D YF+ N + + +P K+ R + +
Sbjct: 276 TVSQSSSDQLKPKRRNNQSSD--DQYFTMLENSPIEGGFRLISENPPKCKKPRWEKGS-- 331
Query: 133 PSPTAKLNF---HSHLKVEQSGQVPGGVSNLVDMDMEKL---------LEDSVPCRVRAK 180
++ +NF +S +E+ P ++ + +M LE+ R
Sbjct: 332 -CSSSNINFQQPNSSSSIEEPD--PEAIAQMKEMIYRAAAFRPVSLLGLEEVAEKPKRKN 388
Query: 181 RGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
++ P+++A R RR RISDRIR LQ +VP K +TA ML+EA Y+KFL+ Q++ L
Sbjct: 389 VKISSDPQTVAARQRRERISDRIRVLQKIVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 447
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+SIA R RR +IS+R+R+L+ LVP +K +TA ML+EA+ +VKFLQ Q++ L
Sbjct: 388 PQSIAARQRRKKISERVRELEKLVPGGNK-LDTASMLDEAIRFVKFLQIQVQLL 440
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTE 242
P+SIA R RR RIS++IR LQ +VP K +TA ML+EA+ YVKFL+ Q++ L E
Sbjct: 181 PQSIAARHRRERISEKIRILQRMVPGGTKM-DTASMLDEAIHYVKFLKTQLKSLQE 235
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 174 PCRVRA----KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
P RA KRG A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEY 366
Query: 230 VKFLQKQIEELT 241
+K LQ Q++ ++
Sbjct: 367 LKTLQLQVQIMS 378
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 27/177 (15%)
Query: 82 LDQVGFQRQNSSPADLFDGYFSNYATPSSYDYV-----------DVSPNSNKRAREDNNT 130
+D + + S +D+ +F N P+ +V D SP + T
Sbjct: 1 MDDIDILKSTLSQSDMSSTFFPNNTAPNCTPHVLPIIPPPAYFSDYSPPPGTSLFQTTPT 60
Query: 131 QFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDM-----DMEKLLEDSVPCRVRAKRGC-- 183
P A+ +SG GG++ + +M M+ + D + +R
Sbjct: 61 IIPETPARQ--------RRSGVSGGGMAAMREMIFRIAAMQPVEIDPEAIKAPKRRNVRI 112
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
+ P+S+A R RR RIS +IR LQ LVP K +TA ML+EAV YVKFL++Q++ L
Sbjct: 113 SKDPQSVAARHRRERISQKIRILQRLVPGGTKM-DTASMLDEAVHYVKFLKRQVQTL 168
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R R KR A +++E+ RR+RI+++++ LQ L+PN K T+ A ML++A+EY+K L
Sbjct: 37 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKQL 95
Query: 234 QKQIEELT 241
Q Q++ L+
Sbjct: 96 QLQVQMLS 103
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A + RR RIS+R+R LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 204 PQSLAAKNRRERISERLRALQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVL 256
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR ++ +++ER RR RI++++R LQ+LVP +KQ + A MLEE +EY+K LQ Q++
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 240 LT 241
++
Sbjct: 277 MS 278
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
G AT P+S+ R RR +I++R+RKLQ L+PN K + ML+EAV YV+FL++Q+ L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGK-VDIVTMLDEAVHYVQFLKRQVTLL 58
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R + C+ +S+ + RR RI++R+R LQ LVPN K + + MLEEAV+YVKFLQ QI
Sbjct: 168 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTK-VDISTMLEEAVQYVKFLQLQI 226
Query: 238 EELT 241
+ L+
Sbjct: 227 KLLS 230
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL++QI L
Sbjct: 147 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 199
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R + C+ +S+ + RR RI++R+R LQ LVPN K + + MLEEAV+YVKFLQ QI
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTK-VDISTMLEEAVQYVKFLQLQI 214
Query: 238 EELT 241
+ L+
Sbjct: 215 KLLS 218
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL++QI L
Sbjct: 134 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 186
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 9/80 (11%)
Query: 171 DSVP-CRVRAKRGCATHPRSIAERV--------RRTRISDRIRKLQDLVPNMDKQTNTAD 221
D +P VRA+RG AT S+AERV RR +I+ R++ LQ+LVP DK TA
Sbjct: 122 DKLPYVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTAL 181
Query: 222 MLEEAVEYVKFLQKQIEELT 241
+L+E + +V+ LQ+Q+E L+
Sbjct: 182 VLDEIINHVQTLQRQVEMLS 201
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+S+A +VRR +I+++++ LQDLVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 238 PQSVAAKVRREKIAEKLKVLQDLVPNGTK-VDLVTMLEKAITYVKFLQLQVKVLA 291
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 22/117 (18%)
Query: 145 LKVEQSGQVPGGVSNLVDMDMEKLLEDSVP----CRVRAKRGCATHPRSIAERV------ 194
LK ++ V G SN D K E P VRA+RG AT SIAERV
Sbjct: 90 LKAAEASSVAG--SNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAERVIHFSLC 147
Query: 195 ----------RRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ Q+E L+
Sbjct: 148 LSISYLLLVARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLS 204
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL++QI+ L
Sbjct: 124 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIKLL 176
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Query: 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
G PR +R+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ Q++ L+
Sbjct: 143 GGTAPPRQ--QRLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLS 199
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+S+A + RR RIS+R+R LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 207 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLA 260
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+S+A + RR RIS+R+R LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 207 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLA 260
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 183 CATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
++ P+++A R+RR R+S+R+R LQ LVP K +TA ML+EA Y+KFL+ Q+E L
Sbjct: 275 ISSDPQTVAARLRRERVSERLRVLQRLVPGGSKM-DTATMLDEAASYLKFLKSQLEAL 331
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+S+A + RR RIS+R+R LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 191 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLA 244
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 185 THPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
T P+S+ R RR RI++R++ LQ+L+PN K + + MLEEAV YVKFLQ QI+ L+
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTK-VDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL++QI L
Sbjct: 139 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 191
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+S+A + RR RIS+R+R LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 209 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLA 262
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 185 THPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
T P+S+ R RR RI++R++ LQ+L+PN K + + MLEEAV YVKFLQ QI+ L+
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTK-VDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 185 THPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
T P+S+ R RR RI++R++ LQ+L+PN K + + MLEEAV YVKFLQ QI+ L+
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTK-VDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|357131240|ref|XP_003567247.1| PREDICTED: transcription factor LAX PANICLE-like [Brachypodium
distachyon]
Length = 228
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R R +T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+
Sbjct: 54 RRRPGTKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKA 112
Query: 236 QI 237
Q+
Sbjct: 113 QV 114
>gi|357127136|ref|XP_003565241.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 257
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+S +VRR RIS+R++ LQDLVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 172 PQSAVAKVRRERISERLKVLQDLVPNGTK-VDMVTMLEKAITYVKFLQLQVKVLA 225
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+SI R RR RI++R++ LQ LVPN K + + MLEEAV YVKFLQ QI L+
Sbjct: 223 PQSIYARKRRERINERLKVLQSLVPNGTK-VDMSTMLEEAVHYVKFLQLQIRLLS 276
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+S+A +VRR +I+++++ LQDLVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 204 PQSVAAKVRREKIAEKLKVLQDLVPNGTK-VDLVTMLEKAITYVKFLQLQVKVLA 257
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR RIS +++ LQ LVP D+ T A +L+E + YV+ L+
Sbjct: 75 VHVRARRGEATDSHSLAERVRRERISAKMKLLQSLVPGCDQITGKALILDEIIRYVQSLK 134
Query: 235 KQI 237
+I
Sbjct: 135 DRI 137
>gi|51090503|dbj|BAD35705.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 211
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 183 CATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
++ P+S+A R+RR R+S R+R LQ LVP + +TA MLEEA+ YVKFL+ ++ L
Sbjct: 120 VSSEPQSVAARLRRERVSQRMRALQRLVPG-GARLDTASMLEEAIRYVKFLKGHVQSL 176
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL++QI L
Sbjct: 103 PASVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 155
>gi|125554507|gb|EAZ00113.1| hypothetical protein OsI_22119 [Oryza sativa Indica Group]
Length = 201
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 183 CATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
++ P+S+A R+RR R+S R+R LQ LVP + +TA MLEEA+ YVKFL+ ++ L
Sbjct: 121 VSSEPQSVAARLRRERVSQRMRALQRLVPG-GARLDTASMLEEAIRYVKFLKGHVQSL 177
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
+T P+++A R RR RISDRIR LQ +VP K +TA ML+EA Y+KFL+ Q++ L
Sbjct: 205 STDPQTVAARQRRERISDRIRVLQGMVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 260
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R+RR RIS++IR LQ LVP ++ +TA ML+EA+ YVKFL++QI L
Sbjct: 44 PQSVAARLRRERISEKIRILQRLVPG-GRKMDTASMLDEAIRYVKFLKRQIRSL 96
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL+KQI L
Sbjct: 108 PQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKKQIRLL 160
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 162 DMDMEKLLEDSVPCR--VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNT 219
D + E L D P + A+R A +++ER RR RI++++R LQ+L+P+ +K T+
Sbjct: 292 DAESESLALDRKPPQKLTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDK 350
Query: 220 ADMLEEAVEYVKFLQKQIEEL 240
A ML+EA+EY+K LQ Q++ +
Sbjct: 351 ASMLDEAIEYLKTLQMQVQMM 371
>gi|224091579|ref|XP_002334947.1| predicted protein [Populus trichocarpa]
gi|222875273|gb|EEF12404.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 183 CATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
+T P+S+A R RR RISDR + LQ LVP K +T MLEEA+ YVKFL+ Q+
Sbjct: 37 LSTDPQSVAARERRHRISDRFKILQSLVPGGTKM-DTVSMLEEAINYVKFLKTQV 90
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R +KR A +++E+ RR++I+++++ LQ+L+PN +K T+ A ML+EA+EY+K L
Sbjct: 82 PPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNK-TDKASMLDEAIEYLKQL 140
Query: 234 QKQIEEL 240
Q Q++ L
Sbjct: 141 QLQVQML 147
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KRG +++ER RR RI++++R LQ+L+PN +K + A MLEEA+EY+K LQ Q++
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 240 LT 241
++
Sbjct: 380 MS 381
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KRG +++ER RR RI++++R LQ+L+PN +K + A MLEEA+EY+K LQ Q++
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 240 LT 241
++
Sbjct: 380 MS 381
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R R KR A +++E+ RR+RI+++++ LQ L+PN K T+ A ML++A+EY+K L
Sbjct: 45 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQL 103
Query: 234 QKQIEELT 241
Q Q++ L+
Sbjct: 104 QLQVQMLS 111
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KRG +++ER RR RI++++R LQ+L+PN +K + A MLEEA+EY+K LQ Q++
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 383
Query: 240 LT 241
++
Sbjct: 384 MS 385
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R R KR A +++E+ RR+RI+++++ LQ L+PN K T+ A ML++A+EY+K L
Sbjct: 45 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQL 103
Query: 234 QKQIEELT 241
Q Q++ L+
Sbjct: 104 QLQVQMLS 111
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R R KR A +++E+ RR+RI+++++ LQ L+PN K T+ A ML++A+EY+K L
Sbjct: 23 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQL 81
Query: 234 QKQIEELT 241
Q Q++ L+
Sbjct: 82 QLQVQMLS 89
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL++QI L
Sbjct: 128 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRFL 180
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R +KR A +++E+ RR+RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 151 RSSSKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQL 209
Query: 236 QIEELT 241
Q++ L+
Sbjct: 210 QVQMLS 215
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 34/40 (85%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K
Sbjct: 240 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK 279
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KRG +++ER RR RI++++R LQ+L+PN +K + A MLEEA+EY+K LQ Q++
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 324
Query: 240 LT 241
++
Sbjct: 325 MS 326
>gi|15240948|ref|NP_195751.1| aprataxin [Arabidopsis thaliana]
gi|75335734|sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic
helix-loop-helix protein 140; Short=AtbHLH140;
Short=bHLH 140; AltName: Full=Transcription factor EN
122; AltName: Full=bHLH transcription factor bHLH140
gi|7320709|emb|CAB81914.1| putative protein [Arabidopsis thaliana]
gi|332002943|gb|AED90326.1| aprataxin [Arabidopsis thaliana]
Length = 912
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R R+ +T P+S+A R RR RISDR + LQ +VP K +T ML+EA+ YVKFL+
Sbjct: 36 RSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKM-DTVSMLDEAISYVKFLKA 94
Query: 236 QI 237
QI
Sbjct: 95 QI 96
>gi|449461799|ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
gi|449532778|ref|XP_004173357.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 195
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R + +T P+S+A R RR RISDR + LQ LVP K +T ML+EA+ YVKFL+
Sbjct: 41 RSKGVVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTK-MDTVSMLDEAIHYVKFLKT 99
Query: 236 QI 237
QI
Sbjct: 100 QI 101
>gi|326527333|dbj|BAK04608.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
+T P+S+A R RR RISDR R L+ LVP K N + MLE+A+ YVKFL+ Q+
Sbjct: 54 STDPQSVAARERRHRISDRFRVLRSLVPGGSKMDNVS-MLEQAIHYVKFLKAQV 106
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++R++ LQ+L+PN +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
>gi|140084384|gb|ABO84936.1| Rhd6-like 7 [Physcomitrella patens]
Length = 67
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
G AT P+S+ R RR +I++R++ LQ LVPN +Q + MLEEA+ +VKFL+ Q+E L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQRLVPN-GEQVDIVTMLEEAIHFVKFLEFQLELLR 59
Query: 242 EHQR 245
R
Sbjct: 60 SDDR 63
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 185 THPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
T P+S+ R RR +I++R++ LQ+LVPN K + + MLEEAV Y+KF+Q QI+ L+
Sbjct: 254 TDPQSLYARKRREKINERLKVLQNLVPNGTK-VDISTMLEEAVHYIKFMQLQIKLLS 309
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
++ G A +SIA + RR RIS+R++ LQDLVPN K + MLE+A+ YVKFLQ Q+
Sbjct: 232 KSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSK-VDLVTMLEKAISYVKFLQLQV 290
Query: 238 EEL 240
+ L
Sbjct: 291 KVL 293
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R +T P+++A R RR RIS++IR LQ LVP K +TA ML+EA Y+KFL+ Q+
Sbjct: 333 RKNVKISTDPQTVAARHRRERISEKIRVLQKLVPGGSKM-DTASMLDEAANYLKFLRSQV 391
Query: 238 EEL 240
+ L
Sbjct: 392 KAL 394
>gi|297810265|ref|XP_002873016.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318853|gb|EFH49275.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 898
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R R+ +T P+S+A R RR RIS+R + LQ +VP K +T MLEEA+ YVKFL+
Sbjct: 36 RSRSTSTLSTDPQSVAARERRHRISERFKILQSMVPGGAKM-DTVSMLEEAIRYVKFLKA 94
Query: 236 QI 237
QI
Sbjct: 95 QI 96
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 83/171 (48%), Gaps = 37/171 (21%)
Query: 102 FSNYATPSSYDYVD-VSP--NSNKRAREDNNTQFPSP--------TAKLNFHSHLKVEQS 150
+SN+ +YDY + ++P NSN R ED N FP+ T K N H E
Sbjct: 144 YSNWEDNLNYDYQNQLNPKLNSNPRLLEDFNC-FPASSYGSMSGNTPKENQHGE---ESF 199
Query: 151 GQVPGGVSNLVDMDMEKLLEDSVPCR-------VRA-KRGCAT-------------HPRS 189
G + + + D E ++S + ++A KR C P+S
Sbjct: 200 GWIYTEATAVTDSIQESATKESCFHKRPHMGETMQALKRQCTAATRKSKPKSIPPKDPQS 259
Query: 190 IAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
+A + RR RIS+R++ LQDLVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 260 LAAKNRRERISERLKILQDLVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 309
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 23/79 (29%)
Query: 185 THPRSIAERV----------------------RRTRISDRIRKLQDLVPNMDKQTNTADM 222
T P SIAERV RR RI++R++ LQ+LVPN +K T+ A M
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 277
Query: 223 LEEAVEYVKFLQKQIEELT 241
L+E ++YVKFLQ Q++ L+
Sbjct: 278 LDEIIDYVKFLQLQVKVLS 296
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
AKR A + +ER RR RI++++R LQ+L+PN +K T+ A MLEEA+EY+K LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLEEAIEYLKMLQLQLQ 77
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YVKFL++QI L
Sbjct: 119 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAILYVKFLKRQIRLL 171
>gi|357130303|ref|XP_003566789.1| PREDICTED: uncharacterized protein LOC100831535 [Brachypodium
distachyon]
Length = 455
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRR 246
P+++A R RR RIS+R+R LQ LVP K +TA ML+EA Y++FL+ QI +L RR
Sbjct: 342 PQTVAARQRRERISERLRVLQRLVPGGAKM-DTASMLDEAASYLRFLKAQIRDLQTLDRR 400
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R +KR A +++E+ RR+RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 167 RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQL 225
Query: 236 QIEELT 241
Q++ L+
Sbjct: 226 QVQMLS 231
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 23/79 (29%)
Query: 185 THPRSIAERV----------------------RRTRISDRIRKLQDLVPNMDKQTNTADM 222
T P SIAERV RR RI++R++ LQ+LVPN +K T+ A M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 223 LEEAVEYVKFLQKQIEELT 241
L+E ++YVKFLQ Q++ L+
Sbjct: 279 LDEIIDYVKFLQLQVKVLS 297
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+++A R+RR R+S+R+R LQ LVP + +TA ML+EA Y+KFL+ Q++ L
Sbjct: 294 PQTVAARLRRERVSERLRVLQRLVPGGSRM-DTASMLDEAASYLKFLKTQVKAL 346
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R +KR A +++E+ RR+RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 139 RNPSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQL 197
Query: 236 QIEELT 241
Q++ LT
Sbjct: 198 QVQMLT 203
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 171 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYV 230
+S + + K + P+SIA + RR RIS+R++ LQ+LVPN K + MLE+A+ YV
Sbjct: 219 NSATKKQKPKTSPSKDPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYV 277
Query: 231 KFLQKQIEEL 240
KFLQ Q++ L
Sbjct: 278 KFLQLQVKVL 287
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R +KR A +++E+ RR+RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 167 RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQL 225
Query: 236 QIEELT 241
Q++ L+
Sbjct: 226 QVQMLS 231
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VR +RG AT S+AER RR +I+ R++ LQ+LVP +K + TA +L++ + +V+ LQ
Sbjct: 158 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQ 217
Query: 235 KQIEELT 241
++E L+
Sbjct: 218 HEVEILS 224
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 23/79 (29%)
Query: 185 THPRSIAERV----------------------RRTRISDRIRKLQDLVPNMDKQTNTADM 222
T P SIAERV RR RI++R++ LQ+LVPN +K T+ A M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 223 LEEAVEYVKFLQKQIEELT 241
L+E ++YVKFLQ Q++ L+
Sbjct: 279 LDEIIDYVKFLQLQVKVLS 297
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 162 DMDMEKLLEDSVPCR--VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNT 219
D + E L D P + A+R A +++ER RR RI++++R LQ+L+P+ +K T+
Sbjct: 13 DAESESLALDRKPPQKLTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDK 71
Query: 220 ADMLEEAVEYVKFLQKQIEEL 240
A ML+EA+EY+K LQ Q++ +
Sbjct: 72 ASMLDEAIEYLKTLQMQVQMM 92
>gi|147838921|emb|CAN77067.1| hypothetical protein VITISV_022410 [Vitis vinifera]
gi|297735648|emb|CBI18142.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 183 CATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
+T P+S+A R RR RISDR + LQ LVP K +T MLEEA+ YVK+L+ QI
Sbjct: 36 LSTDPQSVAARERRHRISDRFKILQSLVPGGTKM-DTVSMLEEAIHYVKYLKTQI 89
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 168 LLEDSVPCRV-RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
L+E P ++ A+R A +++ER RR RI+++++ LQ+L+P+ +K T+ A ML+EA
Sbjct: 250 LIERKPPLKLPTARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEA 308
Query: 227 VEYVKFLQKQIEEL 240
+EY+K LQ Q++ +
Sbjct: 309 IEYLKTLQMQVQMM 322
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++R++ LQ+L+PN +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 451 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 509
Query: 239 ELT 241
++
Sbjct: 510 MMS 512
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
R KR A +++ER RR RI++++R LQ+L+PN +K T+ A ML+EA+EY+K LQ Q
Sbjct: 11 TRPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQ 69
Query: 237 IE----EL--TEHQRRCKC 249
++ EL + H C C
Sbjct: 70 LQVPKIELLHSSHTFSCSC 88
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 212 PQSVAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 264
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VR +RG AT S+AER RR +I+ R++ LQ+LVP +K + TA +L++ + +V+ LQ
Sbjct: 186 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQ 245
Query: 235 KQIEELT 241
++E L+
Sbjct: 246 NEVEILS 252
>gi|168023485|ref|XP_001764268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684420|gb|EDQ70822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
P+S+A R RR RISDRIR LQ LVP K +TA ML+EA+ YVKFL+ Q++
Sbjct: 36 PQSVAARHRRERISDRIRVLQRLVPGGTK-MDTASMLDEAIHYVKFLKLQLQ 86
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 522
Query: 239 ELT 241
++
Sbjct: 523 MMS 525
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 519
Query: 239 ELT 241
++
Sbjct: 520 IMS 522
>gi|414589821|tpg|DAA40392.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 202
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%), Gaps = 2/33 (6%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAERVR 195
+EK L+ D+VPC++RAKRGCATHPRSIAERVR
Sbjct: 146 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVR 178
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
P+S+A R RR RISDRIR LQ LVP K +TA ML+EA+ YVKFL+ Q++
Sbjct: 6 PQSVAARHRRERISDRIRVLQRLVPGGTKM-DTASMLDEAIHYVKFLKLQLQ 56
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
++ P+++A R+RR R+S+R+R LQ LVP + +TA ML+EA Y+KFL+ Q++ L
Sbjct: 287 SSDPQTVAARLRRERVSERLRVLQRLVPGGSRM-DTASMLDEAAGYLKFLKSQVKAL 342
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
++ P+++A R+RR R+S+R+R LQ LVP + +TA ML+EA Y+KFL+ Q++ L
Sbjct: 286 SSDPQTVAARLRRERVSERLRVLQRLVPGGSRM-DTASMLDEAAGYLKFLKSQVKAL 341
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 367 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 425
Query: 239 ELT 241
++
Sbjct: 426 IMS 428
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
C AKR +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ
Sbjct: 376 CSRGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQ 434
Query: 235 KQIEELT 241
Q++ ++
Sbjct: 435 LQVQMMS 441
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 14/75 (18%)
Query: 179 AKRGCATH-------------PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEE 225
AK+ C+T P+S+A + RR RIS+R++ LQ+LVPN K + MLE+
Sbjct: 228 AKKQCSTESKTPKHKSSPSKDPQSVAAKNRRERISERLKILQELVPNGSK-VDLVTMLEK 286
Query: 226 AVEYVKFLQKQIEEL 240
A+ YVKFLQ Q++ L
Sbjct: 287 AISYVKFLQLQVKVL 301
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 431 SKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 489
Query: 239 ELT 241
++
Sbjct: 490 IMS 492
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 453 SKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 511
Query: 239 ELT 241
++
Sbjct: 512 IMS 514
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VR +RG AT S+AER RR +I+ R++ LQ+LVP +K + TA +L++ + +V+ LQ
Sbjct: 190 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQ 249
Query: 235 KQIEELT 241
++E L+
Sbjct: 250 NEVEILS 256
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+++A R RR RIS +IR LQ LVP K +TA ML+EA+ YVK+L+ Q++ +
Sbjct: 293 PQTVAARHRRERISTKIRILQRLVPGGTK-MDTASMLDEAIHYVKYLKSQVQAM 345
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
C AKR +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ
Sbjct: 173 CSRGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQ 231
Query: 235 KQIEELT 241
Q++ ++
Sbjct: 232 LQVQMMS 238
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 380
Query: 239 ELT 241
++
Sbjct: 381 IMS 383
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 249 PQSVAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 301
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 516
Query: 239 ELT 241
++
Sbjct: 517 IMS 519
>gi|326509201|dbj|BAJ86993.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 23/83 (27%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK----------------------- 215
K+ ++H RSIAE RRT IS R+R LQ+LVPNM+K
Sbjct: 200 VKKDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGINPL 259
Query: 216 QTNTADMLEEAVEYVKFLQKQIE 238
TN +DML+ AV+Y+K LQ QI+
Sbjct: 260 PTNMSDMLDLAVDYIKELQMQIK 282
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R R KR A +++E+ RR+RI+++++ LQ L+PN K T+ A ML++A+EY+K L
Sbjct: 23 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQL 81
Query: 234 QKQIE 238
Q Q++
Sbjct: 82 QLQVQ 86
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AERVRR +IS+ + LQDLVP+ + T AD L+E + YV+ L+
Sbjct: 19 IHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKADSLDEIINYVQSLK 78
Query: 235 KQIEEL 240
+Q+E L
Sbjct: 79 RQVELL 84
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 516
Query: 239 ELT 241
++
Sbjct: 517 IMS 519
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 501
Query: 239 ELT 241
++
Sbjct: 502 IMS 504
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
A+R A +++ER RR RI++++R LQ+L+P+ +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 239 EL 240
+
Sbjct: 388 MM 389
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+++A R RR RIS +IR LQ LVP K +TA ML+EA+ YVK+L+ Q++ +
Sbjct: 294 PQTVAARHRRERISTKIRILQRLVPGGTK-MDTASMLDEAIHYVKYLKSQVQAM 346
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R +T P+++A R RR RIS++IR LQ LVP K +TA ML+EA Y+KFL+ Q+
Sbjct: 299 RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKM-DTASMLDEAANYLKFLRAQV 357
Query: 238 EEL 240
+ L
Sbjct: 358 KAL 360
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R +T P+++A R RR RIS++IR LQ LVP K +TA ML+EA Y+KFL+ Q+
Sbjct: 272 RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKM-DTASMLDEAANYLKFLRAQV 330
Query: 238 EEL 240
+ L
Sbjct: 331 KAL 333
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
AKR +++ER RR RI++++R LQ+L+PN +K + A MLEEA+EY+K LQ Q++
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 315
Query: 239 ELT 241
++
Sbjct: 316 MMS 318
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
A+R A +++ER RR RI++++R LQ+L+P+ +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 239 EL 240
+
Sbjct: 388 MM 389
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 203 PQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVL 255
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R +T P+++A R RR RIS++IR LQ LVP K +TA ML+EA Y+KFL+ Q+
Sbjct: 270 RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQV 328
Query: 238 EEL 240
+ L
Sbjct: 329 KAL 331
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
A +++E+ RR+RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ Q++ LT
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLT 244
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R +T P+++A R RR RI+++IR LQ LVP K +TA ML+EA Y+KFL+ Q+
Sbjct: 335 RKNVKISTDPQTVAARHRRERINEKIRVLQKLVPGGSKM-DTASMLDEAANYLKFLRSQV 393
Query: 238 EEL 240
+ L
Sbjct: 394 KAL 396
>gi|356536103|ref|XP_003536579.1| PREDICTED: transcription factor bHLH84-like [Glycine max]
Length = 352
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 169 LEDSVPCRVRAK-----RGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
LEDS +++ K RG AT P+S+ R RR RI++R++ LQ+LVPN K + + ML
Sbjct: 247 LEDSTSLKLKGKKSTANRGSATDPQSVYARRRRERINERLKILQNLVPNGTK-VDISTML 305
Query: 224 EEAVEYVKFLQKQIEELT 241
EEAV+YVKFLQ QI+ L+
Sbjct: 306 EEAVQYVKFLQLQIKLLS 323
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R R KR A +++E+ RR +I+++++ LQ LVPN K T+ A ML++A+EY+K LQ
Sbjct: 43 RPRGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKHLQL 101
Query: 236 QIEELT 241
Q++ L+
Sbjct: 102 QVQMLS 107
>gi|414877869|tpg|DAA55000.1| TPA: putative clathrin heavy chain family protein [Zea mays]
Length = 898
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
P+SI R RR RI++R++ LQ LVPN K + + MLEEAV YVKFLQ QI
Sbjct: 223 PQSIYARKRRERINERLKVLQSLVPNGTK-VDMSTMLEEAVHYVKFLQLQI 272
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR A + +ER RR RI++++R LQ+L+PN +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 592 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQM 650
Query: 240 LT 241
++
Sbjct: 651 MS 652
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++E+ RR RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKKLQLQVQ 210
Query: 239 ELT 241
L+
Sbjct: 211 MLS 213
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 205 PQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVL 257
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
A+RG AT S+AER RR +I+ R+ L++LVP K + TA +L+E + +V+ LQ+Q+E
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 239 ELT 241
L+
Sbjct: 61 YLS 63
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A + +ER RR RI++++R LQ L+PN +K T+ A MLEEA+EY+K LQ Q++
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 239 EL 240
+
Sbjct: 415 VM 416
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 143 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVL 195
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
AKR A +++ER RR RI++++R LQ+LVP+ +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 233 AKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNK-TDKASMLDEAIEYLKSLQLQLQ 291
Query: 239 EL 240
+
Sbjct: 292 VM 293
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR +++ER RR RI++++R LQ+L+PN +K + A MLEEA+EY+K LQ Q++
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 389
Query: 239 ELT 241
++
Sbjct: 390 MMS 392
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++E+ RR+RI+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 160
Query: 239 ELT 241
L+
Sbjct: 161 MLS 163
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
A+R A +++ER RR RI++++R LQ+L+P+ +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 382
Query: 239 EL 240
+
Sbjct: 383 MM 384
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++E+ RR++I+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 80
Query: 239 ELT 241
L+
Sbjct: 81 MLS 83
>gi|449493201|ref|XP_004159220.1| PREDICTED: uncharacterized protein LOC101232790 [Cucumis sativus]
Length = 312
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
PRS R RR ++SD+ R LQ L+P DK+ + A MLEEA +YVKFLQ Q+ L
Sbjct: 180 PRSTFARQRRQKLSDKTRCLQKLLP-WDKKMDIATMLEEACKYVKFLQAQLLAL 232
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
AKR A + +ER RR RI++++R LQ+L+PN +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 77
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR +++ER RR RI++++R LQ+L+PN +K + A MLEEA+EY+K LQ Q++
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 389
Query: 239 ELT 241
++
Sbjct: 390 MMS 392
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 211 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVL 263
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R +T P+++A R RR RIS++IR LQ LVP K +TA ML+EA Y KFL+ Q+
Sbjct: 270 RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYFKFLRAQV 328
Query: 238 EEL 240
+ L
Sbjct: 329 KAL 331
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 211 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVL 263
>gi|356551793|ref|XP_003544258.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 110
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 27 PQSVAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 80
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR +++ER RR RI++++R LQ+L+PN +K + A MLEEA+EY+K LQ Q++
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 268
Query: 239 ELT 241
++
Sbjct: 269 MMS 271
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR A +++E+ RR+RI+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 159 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 217
Query: 240 LT 241
L+
Sbjct: 218 LS 219
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Query: 188 RSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
+++E+ RR+RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ Q++ LT
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLT 180
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR +++ER RR RI++++R LQ+L+PN +K + A MLEEA+EY+K LQ Q++
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 173
Query: 239 ELT 241
++
Sbjct: 174 MMS 176
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
A+R A +++ER RR RI++++R LQ+L+P+ +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 239 EL 240
+
Sbjct: 373 MM 374
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
A+R A +++ER RR RI++++R LQ+L+P+ +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 353
Query: 239 EL 240
+
Sbjct: 354 MM 355
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
A+R A +++ER RR RI++++R LQ+L+P+ +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 239 EL 240
+
Sbjct: 373 MM 374
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
AKR +++ER RR RI++++R LQ+L+PN +K + + MLEEA+EY+K LQ Q++
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKSSMLEEAIEYLKTLQLQVQ 376
Query: 239 ELT 241
++
Sbjct: 377 MMS 379
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R +KR + +++E+ RR RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 189 RNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQL 247
Query: 236 QIEELT 241
Q++ L+
Sbjct: 248 QVQMLS 253
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R R H +S ER RR RI++++R LQ L+PN +K T+ A MLEEA+EY+K LQ Q+
Sbjct: 357 RRNRAAEVHNQS--ERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQL 413
Query: 238 EEL 240
+ +
Sbjct: 414 QVM 416
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 33/39 (84%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK 215
VRA+RG AT P SIAER+RR +I++R++ LQ+LVPN +K
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 192 ERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
ERVRR RI +R++ LQ LVP +K T A MLEE + YV+ LQ+Q+E L+
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLS 52
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 193 RVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
++RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ Q++ L+
Sbjct: 140 QLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLS 187
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++E+ RR++I+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 239 ELT 241
L+
Sbjct: 158 MLS 160
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++E+ RR++I+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 239 ELT 241
L+
Sbjct: 158 MLS 160
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 182 GCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
G AT P+S+ R RR +I++R++ LQ LVPN K + ML+EA+ YV+FLQ Q+ L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAK-VDIVTMLDEAIHYVQFLQLQVTLL 58
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR + +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 239 ELT 241
++
Sbjct: 398 IMS 400
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
A +++E+ RR+RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ Q++ L+
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLS 201
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR + +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 337 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 395
Query: 239 ELT 241
++
Sbjct: 396 IMS 398
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR A +++E+ RR++I+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 160
Query: 240 LT 241
L+
Sbjct: 161 LS 162
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 460
Query: 240 LT 241
++
Sbjct: 461 MS 462
>gi|312165807|gb|ADQ38902.1| bHLH transcription factor [Musa acuminata AAA Group]
Length = 331
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 180 KRGCATHPRS---IAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
K G T PRS E+ RR +I+DR + L+DL+P+ D++ + A L E +EY+KFLQ++
Sbjct: 38 KPGTPTTPRSKHSATEQRRRCKINDRFQILRDLIPHSDQKRDKASFLLEVIEYIKFLQEK 97
Query: 237 IEE 239
+++
Sbjct: 98 VQK 100
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++E+ RR+RI+++++ LQ+L+PN K T+ A ML+EA+EY+K LQ Q++
Sbjct: 134 SKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSK-TDKASMLDEAIEYLKLLQLQVQ 192
Query: 239 ELT 241
L+
Sbjct: 193 GLS 195
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 439
Query: 240 LTEHQRRC 247
++ C
Sbjct: 440 MSMGTGLC 447
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDK--QTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +I+ R++ LQ+LVP K + TA +L++ + +V+ LQ
Sbjct: 32 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQSLQ 91
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 92 RQVEFLS 98
>gi|147768917|emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]
Length = 282
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
P+S+A R RR RIS++IR LQ LVP K +TA ML+EA+ YV FL+ Q E
Sbjct: 108 PQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIHYVXFLKTQTE 158
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 29/91 (31%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVP------------------------- 211
VRA+RG AT S+AERVRR +IS+R++ LQDLVP
Sbjct: 278 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTHAYFNF 337
Query: 212 ----NMDKQTNTADMLEEAVEYVKFLQKQIE 238
++ K T A ML+E + YV+ LQ Q+E
Sbjct: 338 QRLLDLVKVTGKAVMLDEIINYVQSLQCQVE 368
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Query: 188 RSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
+++E+ RR+RI+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q++ LT
Sbjct: 181 HNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLT 233
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR A + +ER RR RI++++R LQ+L+PN +K T+ A ML+EA++Y+K LQ Q++
Sbjct: 731 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIDYLKILQLQLQM 789
Query: 240 LT 241
++
Sbjct: 790 MS 791
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 507
Query: 240 LT 241
++
Sbjct: 508 MS 509
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 495
Query: 240 LT 241
++
Sbjct: 496 MS 497
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 367
Query: 240 LT 241
++
Sbjct: 368 MS 369
>gi|357444409|ref|XP_003592482.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481530|gb|AES62733.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 157
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 169 LEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVE 228
L+D R+ + A I RR RI++R+R LQ LVPN K + + MLEEAV+
Sbjct: 61 LKDISLVRIWIQVNYAESQYVIMILRRRERINERLRILQTLVPNGTK-VDISTMLEEAVQ 119
Query: 229 YVKFLQKQIEELT 241
YVKFLQ QI+ L+
Sbjct: 120 YVKFLQLQIKLLS 132
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR A +++ER RR RI++R++ LQ+L+P +K ++ A ML+EA+EY+K LQ QI+
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 268
Query: 240 LT 241
++
Sbjct: 269 MS 270
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Query: 188 RSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
+++E+ RR+RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ Q++ L+
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLS 168
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
P+++A R+RR ++S+R+R LQ LVP K +TA ML+EA Y+KFL+ Q
Sbjct: 304 PQTVAARLRREKVSERLRALQRLVPGGSKM-DTASMLDEAASYLKFLKSQ 352
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Query: 188 RSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
+++E+ RR+RI+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q++ LT
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLT 254
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR A +++ER RR RI++R++ LQ+L+P +K ++ A ML+EA+EY+K LQ QI+
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 268
Query: 240 LT 241
++
Sbjct: 269 MS 270
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
AKR A +++ER RR RI+++++ LQ+L+P+ +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 332
Query: 239 EL 240
+
Sbjct: 333 MM 334
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
KR A +++ER RR RI++R++ LQ+L+P +K ++ A ML+EA+EY+K LQ QI+
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 338
Query: 239 ELT 241
++
Sbjct: 339 MMS 341
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
KRG A +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 58
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
KR A +++ER RR RI++R++ LQ+L+P +K ++ A ML+EA+EY+K LQ QI+
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 338
Query: 239 ELT 241
++
Sbjct: 339 MMS 341
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
AKR A +++ER RR RI+++++ LQ+L+P+ +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 239 EL 240
+
Sbjct: 324 MM 325
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
AKR A +++ER RR RI+++++ LQ+L+P+ +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 239 EL 240
+
Sbjct: 324 MM 325
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 239 ELT 241
++
Sbjct: 398 IMS 400
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 155 GGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMD 214
GG N D D E + R R A H +S ER RR RI+ +++ LQ LVPN
Sbjct: 198 GGSENQ-DEDRETKTQTGRSHSTRRSRAAAIHNQS--ERRRRDRINQKMKTLQKLVPNSS 254
Query: 215 KQTNTADMLEEAVEYVKFLQKQIEELT 241
K T+ A ML+E +EY+K LQ Q++ ++
Sbjct: 255 K-TDKASMLDEVIEYLKQLQAQVQMMS 280
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
E+ +P K+ S++ER RR +I+ ++R LQ L+PN DK + A ML++A+EY
Sbjct: 367 EEEIPKSTSTKKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDK-VDKASMLDKAIEY 425
Query: 230 VKFLQKQIEELT 241
+K LQ Q++ ++
Sbjct: 426 LKTLQLQLQMMS 437
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 155 GGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMD 214
GG N D D E + R R A H +S ER RR RI+ +++ LQ LVPN
Sbjct: 160 GGSEN-QDEDRETKTQTGRSHSTRRSRAAAIHNQS--ERRRRDRINQKMKTLQKLVPNSS 216
Query: 215 KQTNTADMLEEAVEYVKFLQKQIEELT 241
K T+ A ML+E +EY+K LQ Q++ ++
Sbjct: 217 K-TDKASMLDEVIEYLKQLQAQVQMMS 242
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R +KR + +++E+ RR RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 189 RNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQL 247
Query: 236 QIEELT 241
Q++ L+
Sbjct: 248 QVQMLS 253
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Query: 188 RSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
+++E+ RR+RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ Q++ L+
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLS 201
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 155 GGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMD 214
GG N D D E E R R A H +S ER RR RI+ +++ LQ LVPN
Sbjct: 222 GGSENQ-DEDRETKTETVRSHSSRRTRAAAVHNQS--ERRRRDRINQKMKALQKLVPNAS 278
Query: 215 KQTNTADMLEEAVEYVKFLQKQIEELT 241
K T+ A ML+E +EY+K LQ Q++ ++
Sbjct: 279 K-TDKASMLDEVIEYLKQLQAQVQAMS 304
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 407
Query: 240 L 240
+
Sbjct: 408 M 408
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R +KR + +++E+ RR RI+++++ LQ+L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 189 RNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQL 247
Query: 236 QIEELT 241
Q++ L+
Sbjct: 248 QVQMLS 253
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
Query: 181 RGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
R H +++E+ RR+RI+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q++ L
Sbjct: 197 RAAEVH--NLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 253
Query: 241 T 241
T
Sbjct: 254 T 254
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 182 GC---ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
GC + + +S+ + RR RI++++R LQ L+PN K + + MLEEAV+YVKFLQ QI+
Sbjct: 165 GCKRPSKNMQSLYAKKRRERINEKLRVLQQLIPNGTK-VDISTMLEEAVQYVKFLQLQIK 223
Query: 239 ELT 241
L+
Sbjct: 224 VLS 226
>gi|413920361|gb|AFW60293.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 188 RSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRC 247
+S+ + RR RI++++R LQ L+PN K + + MLEEAV+YVKFLQ QI+ L C
Sbjct: 178 QSLYAKRRRERINEKLRTLQQLIPNGTK-VDMSTMLEEAVQYVKFLQLQIKLLLA----C 232
Query: 248 KC 249
KC
Sbjct: 233 KC 234
>gi|45735905|dbj|BAD12937.1| bHLH transcription factor (bHLH123)-like protein [Oryza sativa
Japonica Group]
Length = 418
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
P S+A +VR+ ++ DR+ LQ LV K T+TA +L E +EY+KFL Q+ L+
Sbjct: 294 PASLAAKVRKEKLGDRVTALQQLVSPFGK-TDTASVLHETIEYIKFLHDQVGALS 347
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 174 PCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R R H +++ER RR RI++++R LQ+LVP+ +K T+ A +L+EA+EY+K L
Sbjct: 221 PAAKRRTRAAEVH--NLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSL 277
Query: 234 QKQIE 238
Q Q++
Sbjct: 278 QMQVQ 282
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 161 VDMDMEKLLEDSVPCRVRAK----RGC-----ATHPRSIAERVRRTRISDRIRKLQDLVP 211
V MD E L + VR K + C A +S + RR RI++R+R LQ+L+P
Sbjct: 83 VQMDTENELMTNRSKEVRTKMSVSKACKHSVSAESSQSYYAKNRRQRINERLRILQELIP 142
Query: 212 NMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
N K + + MLEEA++YVKFL QI+ L+
Sbjct: 143 NGTK-VDISTMLEEAIQYVKFLHLQIKLLS 171
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR A ++AER RR +I++R++ LQ L+P +K T + MLE+ +EYVK L+ QI +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVS-MLEDVIEYVKSLEMQINQ 205
Query: 240 LTEH 243
H
Sbjct: 206 FMPH 209
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R KR +++E+ RR++I+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 86 RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQL 144
Query: 236 QIEEL 240
Q++ L
Sbjct: 145 QVQTL 149
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR A +++ER RR RI++++R LQ+L+P +K ++ A ML+EA+EY+K LQ Q++
Sbjct: 363 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 421
Query: 239 ELT 241
++
Sbjct: 422 MMS 424
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
+R A +++ER RR RI++++R LQ+L+P+ +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 31 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQV 89
Query: 240 L 240
+
Sbjct: 90 M 90
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
AKR A +++ER RR RI+++++ LQ+L+P +K ++ A ML+EA+EY+K LQ Q++
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 362
Query: 239 ELT 241
++
Sbjct: 363 MMS 365
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R KR +++E+ RR++I+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 86 RNSLKRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQL 144
Query: 236 QIEEL 240
Q++ L
Sbjct: 145 QVQTL 149
>gi|115448427|ref|NP_001047993.1| Os02g0726700 [Oryza sativa Japonica Group]
gi|46390601|dbj|BAD16085.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|113537524|dbj|BAF09907.1| Os02g0726700 [Oryza sativa Japonica Group]
Length = 344
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 40/54 (74%)
Query: 189 SIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTE 242
S E+ RRT+I+DR+ L++L+P+ D++ + A L E +EY++FLQ+++++ E
Sbjct: 151 SATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQEKVQKYEE 204
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 217
Query: 240 L 240
+
Sbjct: 218 M 218
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
AKR A +++ER RR RI+++++ LQ+L+P+ +K T+ A ML+EA+EY+K LQ Q++
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 368
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R KR +++E+ RR++I+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 86 RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQL 144
Query: 236 QIEEL 240
Q++ L
Sbjct: 145 QVQTL 149
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
KR A +++ER RR RI++R++ LQ+L+P +K ++ A ML+EA+EY+K LQ QI+
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 347
Query: 239 ELT 241
++
Sbjct: 348 VMS 350
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R KR +++E+ RR++I+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 85 RNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYMKQLQL 143
Query: 236 QIEEL 240
Q++ L
Sbjct: 144 QVQTL 148
>gi|242069235|ref|XP_002449894.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
gi|241935737|gb|EES08882.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
Length = 242
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 188 RSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
+S+ + RR RI++R+R LQ L+PN K + + MLEEAV+YVKFLQ QI+ L+
Sbjct: 162 QSLYAKRRRERINERLRTLQQLIPNGTK-VDMSTMLEEAVQYVKFLQLQIKLLS 214
>gi|218191496|gb|EEC73923.1| hypothetical protein OsI_08775 [Oryza sativa Indica Group]
Length = 443
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 40/54 (74%)
Query: 189 SIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTE 242
S E+ RRT+I+DR+ L++L+P+ D++ + A L E +EY++FLQ+++++ E
Sbjct: 195 SATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQEKVQKYEE 248
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
AKR A +++ER RR RI+++++ LQ+L+P +K ++ A ML+EA+EY+K LQ Q++
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 324
Query: 239 ELT 241
++
Sbjct: 325 MMS 327
>gi|222623596|gb|EEE57728.1| hypothetical protein OsJ_08226 [Oryza sativa Japonica Group]
Length = 442
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 40/54 (74%)
Query: 189 SIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTE 242
S E+ RRT+I+DR+ L++L+P+ D++ + A L E +EY++FLQ+++++ E
Sbjct: 194 SATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQEKVQKYEE 247
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 193 RVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
+VRR RIS+R+R LQ LVP DK T A +L+E + YV+ LQ Q+E L+
Sbjct: 77 KVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 125
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S P R R H + +ER RR RI++++R LQ+L+PN K T+ ML+EA++Y+K
Sbjct: 11 STPAPTRRSRSADFH--NFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLK 67
Query: 232 FLQKQIEELT 241
LQ Q++ L
Sbjct: 68 SLQLQLQMLV 77
>gi|168042091|ref|XP_001773523.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675225|gb|EDQ61723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 706
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKF 232
P+S+A R RR RISDR+R LQ VP K +TA ML+EA+ YVKF
Sbjct: 514 PQSVAARHRRERISDRVRVLQHFVPGGTKM-DTASMLDEAIHYVKF 558
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.129 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,206,579,254
Number of Sequences: 23463169
Number of extensions: 183272540
Number of successful extensions: 1517061
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 2134
Number of HSP's that attempted gapping in prelim test: 1510111
Number of HSP's gapped (non-prelim): 6578
length of query: 253
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 114
effective length of database: 9,097,814,876
effective search space: 1037150895864
effective search space used: 1037150895864
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 75 (33.5 bits)