BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025407
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 254 bits (649), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/256 (58%), Positives = 178/256 (69%), Gaps = 44/256 (17%)
Query: 24 ELSRGGLARLRSAPASWIDALLEEELEDPLKPNQCLTQLLS----SGDPV---------- 69
E+SR GL+R+RSAPA+WI+ LLEE+ E+ LKPN CLT+LL+ SG +
Sbjct: 20 EVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTELLTGNNNSGGVITSRDDSFEFL 79
Query: 70 -SVTAGLSLSQSQLDQVGFQRQNSSPADLF-------DGYFSNYATPSSYDY----VDVS 117
SV GL + GF RQNSSPAD DGYFSN+ P++YDY VD+S
Sbjct: 80 SSVEQGL---YNHHQGGGFHRQNSSPADFLSGSGSGTDGYFSNFGIPANYDYLSTNVDIS 136
Query: 118 PNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRV 177
P KR+R D TQF S LK EQ + GG+S ++DM+M+K+ EDSVPCRV
Sbjct: 137 PT--KRSR-DMETQFSS---------QLKEEQ---MSGGISGMMDMNMDKIFEDSVPCRV 181
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RAKRGCATHPRSIAERVRRTRISDRIR+LQ+LVPNMDKQTNTADMLEEAVEYVK LQ QI
Sbjct: 182 RAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQI 241
Query: 238 EELTEHQRRCKCSAKD 253
+ELTE Q+RCKC K+
Sbjct: 242 QELTEQQKRCKCKPKE 257
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 235 bits (600), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/242 (59%), Positives = 170/242 (70%), Gaps = 32/242 (13%)
Query: 32 RLRSAPASWIDALLEEELEDPLKPNQCLTQLLS--SGD----------PVSVTAGLSLSQ 79
R+RSAPA+W++ALLEE+ E+ LKPN LT LL+ S D P+ V GL
Sbjct: 31 RIRSAPATWLEALLEEDEEESLKPNLGLTDLLTGNSNDLPTSRGSFEFPIPVEQGL---- 86
Query: 80 SQLDQVGFQRQNSSPADLF---DGYFSNYATPSSYDY----VDVSPNSNKRAREDNNTQF 132
Q GF RQNS+PAD DG+ ++ ++YDY +DVSP S KR+RE F
Sbjct: 87 --YQQGGFHRQNSTPADFLSGSDGFIQSFGIQANYDYLSGNIDVSPGS-KRSRE-MEALF 142
Query: 133 PSPTAKLNFHSHLKVEQS-GQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIA 191
SP F S +K EQS GQVP GVS++ DM+ME L+EDSV RVRAKRGCATHPRSIA
Sbjct: 143 SSP----EFTSQMKGEQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRAKRGCATHPRSIA 198
Query: 192 ERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSA 251
ERVRRTRISDRIRKLQ+LVPNMDKQTNTADMLEEAVEYVK LQ+QI+ELTE Q+RC C
Sbjct: 199 ERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKRCTCIP 258
Query: 252 KD 253
K+
Sbjct: 259 KE 260
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
PE=1 SV=1
Length = 379
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 80/88 (90%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D+E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQDLVPNMD QTNTADML
Sbjct: 291 DIEQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADML 350
Query: 224 EEAVEYVKFLQKQIEELTEHQRRCKCSA 251
+ AV+Y+K LQ+Q++ L E + RC+CS+
Sbjct: 351 DLAVQYIKDLQEQVKALEESRARCRCSS 378
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 87/110 (79%), Gaps = 3/110 (2%)
Query: 144 HLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRI 203
HL + +S S++V +D L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+
Sbjct: 249 HLSLPKSSST---ASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERM 305
Query: 204 RKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEHQRRCKCSAKD 253
RKLQ+LVPNMDKQTNT+DML+ AV+Y+K LQ+Q + L +++ CKC K+
Sbjct: 306 RKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355
>sp|Q8H102|BH128_ARATH Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128
PE=1 SV=1
Length = 362
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Query: 159 NLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTN 218
N +D M+ L EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDKQT+
Sbjct: 266 NYMDNFMQ-LPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTS 324
Query: 219 TADMLEEAVEYVKFLQKQIEELTEHQRRCKC 249
+DML+ AV+++K LQ Q++ L + Q C C
Sbjct: 325 YSDMLDLAVQHIKGLQHQLQNLKKDQENCTC 355
>sp|Q9ZW81|BH129_ARATH Transcription factor bHLH129 OS=Arabidopsis thaliana GN=BHLH129
PE=2 SV=2
Length = 297
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 65/77 (84%), Gaps = 3/77 (3%)
Query: 165 MEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
ME L+ EDSVPCR RAKRG ATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ AD
Sbjct: 218 MENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYAD 277
Query: 222 MLEEAVEYVKFLQKQIE 238
ML+ AVE++K LQ Q+E
Sbjct: 278 MLDLAVEHIKGLQHQVE 294
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E +EYV+FLQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 236 QIEELT 241
Q++ L+
Sbjct: 157 QVKVLS 162
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
++RA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 136 TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQ 194
Query: 235 KQIEELT 241
Q++ L+
Sbjct: 195 LQVKVLS 201
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 236 QIEELT 241
Q++ L+
Sbjct: 188 QVKVLS 193
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 167 KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
K LE + VRA+RG AT SIAERVRR +IS+R++ LQDLVP DK T A ML+E
Sbjct: 162 KELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEI 221
Query: 227 VEYVKFLQKQIEELT 241
+ YV+ LQ+QIE L+
Sbjct: 222 INYVQSLQRQIEFLS 236
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 360
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 361 RQVEFLS 367
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R+R LQ+LVP DK T A ML+E + YV+ LQ
Sbjct: 134 IHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQ 193
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 194 TQVEFLS 200
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AERVRR +IS+R++ LQDLVP DK T A ML+E + YV+ LQ
Sbjct: 221 IHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQ 280
Query: 235 KQIEELT 241
QIE L+
Sbjct: 281 CQIEFLS 287
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 256 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 315
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 316 RQVEFLS 322
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 204 IHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 263
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 264 QQVEFLS 270
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I +R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 299 IHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 358
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 359 RQVEFLS 365
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 323
Query: 236 QIEELT 241
QI+ L+
Sbjct: 324 QIKLLS 329
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEAV+YVKFLQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 236 QIEELT 241
QI+ L+
Sbjct: 295 QIKLLS 300
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D EK SV + RA +G AT P+S+ R RR +I++R++ LQ+LVPN K + + ML
Sbjct: 154 DDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTML 212
Query: 224 EEAVEYVKFLQKQIEELT 241
EEAV YVKFLQ QI+ L+
Sbjct: 213 EEAVHYVKFLQLQIKLLS 230
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R+ LQDLVP ++ T A ML+E + YV+ LQ+Q
Sbjct: 191 VRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQ 250
Query: 237 IEELT 241
+E L+
Sbjct: 251 VEFLS 255
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT SIAERVRR +I++R++ LQD+VP K A ML+E + YV+ LQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 236 QIEELT 241
Q+E L+
Sbjct: 206 QVEFLS 211
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I++R+R LQD+VP K A ML+E + YV+ LQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 235 KQIEELT 241
Q+E L+
Sbjct: 203 NQVEFLS 209
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E + YV+ LQ
Sbjct: 183 IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQ 242
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 243 RQVEFLS 249
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ + +A RG A+ P+S+ R RR RI+DR++ LQ LVPN K + + MLE+AV YVK
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVK 185
Query: 232 FLQKQIEELT 241
FLQ QI+ L+
Sbjct: 186 FLQLQIKLLS 195
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 109 SSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVP-GGVSNLVDMDMEK 167
SS+ V N + RA N + P + +K E + G SN+ + +
Sbjct: 72 SSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS 131
Query: 168 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAV 227
++ VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E +
Sbjct: 132 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 228 EYVKFLQKQIEELT 241
YV+ LQ+Q+E L+
Sbjct: 192 NYVQSLQQQVEFLS 205
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRAKRG AT S+AERVRR +I++R++ LQDLVP K A ML+ ++YV+ LQ
Sbjct: 102 VHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQ 161
Query: 235 KQIEELT 241
QIE L+
Sbjct: 162 NQIEFLS 168
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 171 DSVP-CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
D +P VRA+RG AT S+AER RR +I+ R++ LQ+LVP DK TA +L+E + +
Sbjct: 178 DKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINH 237
Query: 230 VKFLQKQIEELT 241
V+ LQ+Q+E L+
Sbjct: 238 VQTLQRQVEMLS 249
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 237 IEELT 241
+E L+
Sbjct: 196 VEFLS 200
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS+++ LQD++P +K A +L+E + Y++ LQ
Sbjct: 151 IHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQ 210
Query: 235 KQIEELT 241
+Q+E L+
Sbjct: 211 RQVEFLS 217
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVK
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 232 FLQKQIEELT 241
FL+ Q++ L+
Sbjct: 200 FLRLQVKVLS 209
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI----EE 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+
Sbjct: 41 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVTLHQAA 99
Query: 240 LTEHQRRCK 248
L +H+ C+
Sbjct: 100 LVQHEEGCQ 108
>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
SV=1
Length = 302
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVKFL+
Sbjct: 143 RVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRL 201
Query: 236 QIEELT 241
Q++ L+
Sbjct: 202 QVKVLS 207
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R R+ +T P+S+A R RR RISDR + LQ +VP K +T ML+EA+ YVKFL+
Sbjct: 36 RSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKM-DTVSMLDEAISYVKFLKA 94
Query: 236 QI 237
QI
Sbjct: 95 QI 96
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R +T P+++A R RR RIS++IR LQ LVP K +TA ML+EA Y+KFL+ Q+
Sbjct: 270 RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQV 328
Query: 238 EEL 240
+ L
Sbjct: 329 KAL 331
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 205 PQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVL 257
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEEL 240
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 211 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVL 263
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR + +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 239 ELT 241
++
Sbjct: 398 IMS 400
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Query: 188 RSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
+++E+ RR+RI+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q++ LT
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLT 254
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
KR A +++ER RR RI++R++ LQ+L+P +K ++ A ML+EA+EY+K LQ QI+
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 338
Query: 239 ELT 241
++
Sbjct: 339 MMS 341
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR A ++AER RR +I++R++ LQ L+P +K T + MLE+ +EYVK L+ QI +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVS-MLEDVIEYVKSLEMQINQ 205
Query: 240 LTEH 243
H
Sbjct: 206 FMPH 209
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R KR +++E+ RR++I+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 86 RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQL 144
Query: 236 QIEEL 240
Q++ L
Sbjct: 145 QVQTL 149
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEH 243
P+++ R RR RIS++IR L+ +VP K +TA ML+EA+ Y KFL++Q+ L H
Sbjct: 122 PQTVVARRRRERISEKIRILKRIVPGGAK-MDTASMLDEAIRYTKFLKRQVRILQPH 177
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
V KR A + +ER RR +I+ R++ LQ LVPN K T+ A ML+E +EY+K LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 237 IEELT 241
+ ++
Sbjct: 266 VSMMS 270
>sp|Q9SFZ3|BH110_ARATH Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110
PE=2 SV=2
Length = 453
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RV ++ C +VR+ ++ DRI LQ LV K T+TA +L EA+ Y+KFLQ
Sbjct: 321 RVESRSSCPPF------KVRKEKLGDRIAALQQLVSPFGK-TDTASVLMEAIGYIKFLQS 373
Query: 236 QIEELT 241
QIE L+
Sbjct: 374 QIETLS 379
>sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis thaliana GN=BIM1 PE=1 SV=2
Length = 529
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 189 SIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE-LTEHQ 244
S E+ RR++I+DR + L+ L+PN D++ + A L E +EY++FLQ++ ++ +T +Q
Sbjct: 282 SATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQ 338
>sp|Q9M0X8|BH114_ARATH Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114
PE=2 SV=2
Length = 298
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 193 RVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELT 241
+VR+ ++ DRI LQ LV K T+TA +L EAVEY+KFLQ+Q+ L+
Sbjct: 173 KVRKEKLGDRITALQQLVSPFGK-TDTASVLNEAVEYIKFLQEQVTVLS 220
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 41/52 (78%)
Query: 188 RSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
S+ E+ RR++I++R + L++L+PN +++ +TA L E ++YV++LQ+++++
Sbjct: 50 HSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQK 101
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
KR ++AER RR +I+++++ LQ L+P +K T + L++A+EYVK LQ QI+
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVST-LDDAIEYVKSLQSQIQG 310
Query: 240 L 240
+
Sbjct: 311 M 311
>sp|Q8VZ22|BH103_ARATH Transcription factor bHLH103 OS=Arabidopsis thaliana GN=BHLH103
PE=2 SV=1
Length = 301
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 193 RVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEE 239
+VR+ ++ DRI LQ LV K T+TA +L +A++Y+KFLQ+QI E
Sbjct: 190 KVRKEKLGDRITALQQLVSPFGK-TDTASVLHDAIDYIKFLQEQITE 235
>sp|Q9SND4|HEC2_ARATH Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1
Length = 231
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEELTEH 243
P+S+A R RR RIS+RIR LQ LVP K +TA ML+EA+ YVKFL+KQ++ L EH
Sbjct: 129 PQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQSLEEH 184
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,057,905
Number of Sequences: 539616
Number of extensions: 4375414
Number of successful extensions: 36581
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 32245
Number of HSP's gapped (non-prelim): 3475
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)